Calypte anna isolate BGI_N300 chromosome 26, bCalAnn1_v1.p, whole genome shotgun sequence.
type: Entry
definition: Calypte anna isolate BGI_N300 chromosome 26, bCalAnn1_v1.p, whole genome shotgun sequence.
sequence version: NC_044271.1
sequence date: 2019-08-24
sequence: sequence
division: CON
label: NC_044271.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA558503
dblink: SAMN02265252
keyword: WGS
keyword: RefSeq
source: Calypte anna (Anna's hummingbird)
organism: Calypte anna
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Apodiformes; Trochilidae; Calypte.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM012138.1.\nAssembly name: bCalAnn1_v1.p\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2019/05/16. The original whole-genome shotgun project has the\naccession RRCD00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 26-SEP-2018\nAssembly Method :: FALCON v. 5.1.1; FALCON unzip v. 1.0.2;\n scaff10X v. git 4.28.2018; Bionano Solve\n DLS v. 3.2.1; Salsa2 HiC v. 2.0;\n smrtanalysis Arrow polishing & gap\n filling v. 5.1.0.26412; longranger align\n v. 2.2.2; freebayes v. 1.2.0;\n purge_haplotigs v. bit 7.10.2018; gEVAL\n manual curation v. 2018-09-07\nAssembly Name :: bCalAnn1_v1.p\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 54.0x\nSequencing Technology :: PacBio RSII; 10X Genomics linked reads;\n Bionano Genomics DLS; Arima Genomics HiC\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Calypte anna Annotation Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 6306732
topology: linear
so has quality: SO_0000987
location: 1..6306732
location: region:1-6306732:1
RO_0002162: 9244

NC_044271
type: RefSeq
SIO_000068: refseq

PRJNA558503
type: BioProject
SIO_000068: bioproject

SAMN02265252
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6306732:1
position: 6306732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-6306732:1:source
so part of: sequence
organism: Calypte anna
mol type: genomic DNA
isolate: BGI_N300
chromosome: 26
sex: female
country: USA

9244
type: Taxonomy
SIO_000068: taxonomy

LOC115599718
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599718
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1..3664)
location: region:1-3664:-1
so has part: feature:1-3664:-1:exon
subclass of: SO_0000011

115599718
type: Gene
SIO_000068: ncbigene

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3664:-1
position: 3664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-3664:-1:exon

LOC115599718
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599718
product: uncharacterized LOC115599718
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988586.1
SIO_010081: LOC115599718
subclass of: SO_0000673
so part of: LOC115599718
location: complement(join(1..247,2885..2957,3578..3664))
location: region:1-3664:-1
so has part: feature:3578-3664:-1:exon
so has part: feature:2885-2957:-1:exon
so has part: feature:1-247:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3578-3664:-1:exon

position:3578:-1
position: 3578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2885-2957:-1:exon

position:2885:-1
position: 2885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2957:-1
position: 2957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1-247:-1:exon

position:247:-1
position: 247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115599719
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599719
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2883..10416
location: region:2883-10416:1
so has part: feature:2883-10416:1:exon
subclass of: SO_0000011

115599719
type: Gene
SIO_000068: ncbigene

position:2883:1
position: 2883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10416:1
position: 10416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2883-10416:1:exon

LOC115599719
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599719
product: uncharacterized LOC115599719
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003988587.1
SIO_010081: LOC115599719
subclass of: SO_0000673
so part of: LOC115599719
location: join(2883..2960,9756..9761,10406..10416)
location: region:2883-10416:1
so has part: feature:2883-2960:1:exon
so has part: feature:9756-9761:1:exon
so has part: feature:10406-10416:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2883-2960:1:exon

position:2960:1
position: 2960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9756-9761:1:exon

position:9756:1
position: 9756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9761:1
position: 9761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10406-10416:1:exon

position:10406:1
position: 10406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CLPS
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: CLPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12810..14824)
location: region:12810-14824:-1
so has part: feature:12810-14824:-1:exon
subclass of: SO_0000010

103533674
type: Gene
SIO_000068: ncbigene

position:12810:-1
position: 12810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14824:-1
position: 14824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12810-14824:-1:exon

CLPS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CLPS
product: colipase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_008499565.2
SIO_010081: CLPS
subclass of: SO_0000673
so part of: CLPS
location: complement(join(12810..13102,13206..13328,13870..14824))
location: region:12810-14824:-1
so has part: feature:13870-14824:-1:exon
so has part: feature:13206-13328:-1:exon
so has part: feature:12810-13102:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13870-14824:-1:exon

position:13870:-1
position: 13870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13206-13328:-1:exon

position:13206:-1
position: 13206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13328:-1
position: 13328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12810-13102:-1:exon

position:13102:-1
position: 13102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CLPS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CLPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: colipase
translation: MATTLSLRLLLALLLLLAPALPAPHERGLIFNLDTGELCLQSAQCKSSCCHRTSGLSLARCAPKAAEFQECSPKSLYGVYYKCPCESGLSCDVDKTIVGSITNSDFGTCNDPQRSNTSQ
SIO_010081: CLPS
subclass of: SO_0000673
so part of: CLPS
location: complement(join(12965..13102,13206..13328,13870..13968))
location: region:12965-13968:-1
so has part: feature:13870-13968:-1:exon
so has part: feature:13206-13328:-1:exon
so has part: feature:12965-13102:-1:exon

XP_008497787.2
type: Protein
SIO_000068: ncbiprotein

position:12965:-1
position: 12965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13968:-1
position: 13968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13870-13968:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13206-13328:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12965-13102:-1:exon

LHFPL5
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LHFPL5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 15782..21691
location: region:15782-21691:1
so has part: feature:15782-21691:1:exon
subclass of: SO_0000010

103533578
type: Gene
SIO_000068: ncbigene

position:15782:1
position: 15782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21691:1
position: 21691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15782-21691:1:exon

LHFPL5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LHFPL5
product: LHFPL tetraspan subfamily member 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 13 ESTs, 1 long SRA read, 17 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_008499460.2
SIO_010081: LHFPL5
subclass of: SO_0000673
so part of: LHFPL5
location: join(15782..16252,19595..19831,21046..21075,21341..21691)
location: region:15782-21691:1
so has part: feature:15782-16252:1:exon
so has part: feature:19595-19831:1:exon
so has part: feature:21046-21075:1:exon
so has part: feature:21341-21691:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15782-16252:1:exon

position:16252:1
position: 16252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:19595-19831:1:exon

position:19595:1
position: 19595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19831:1
position: 19831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:21046-21075:1:exon

position:21046:1
position: 21046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21075:1
position: 21075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:21341-21691:1:exon

position:21341:1
position: 21341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LHFPL5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LHFPL5
product: LHFPL tetraspan subfamily member 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030465351.1
SIO_010081: LHFPL5
subclass of: SO_0000673
so part of: LHFPL5
location: join(15782..15894,15979..16252,19595..19831,21046..21075,21341..21657)
location: region:15782-21657:1
so has part: feature:15782-15894:1:exon
so has part: feature:15979-16252:1:exon
so has part: feature:19595-19831:1:exon
so has part: feature:21046-21075:1:exon
so has part: feature:21341-21657:1:exon

position:21657:1
position: 21657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15782-15894:1:exon

position:15894:1
position: 15894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15979-16252:1:exon

position:15979:1
position: 15979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:19595-19831:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21046-21075:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:21341-21657:1:exon

LHFPL5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LHFPL5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LHFPL tetraspan subfamily member 5 protein isoform X1
translation: MMSKLLPAQEAARIYHTNYVRNARAMGVLWALFTLCFSILMVVTFIQPYWIGDSIDTPQAGYFGLFSYCIGNALTGELICKGSPLDFGTIPSSAFKTAMFFVGISTFLIIGTILCFSLFFFCNAATVYKVCAWMQLAAATGLMIGCLIYPDGWDSGEVRRLCGDKTDKYTLGACTVRWAYILCIIGILDALILSFLAFVLGNRQDNLLPSDFKAESKEEGE
SIO_010081: LHFPL5
subclass of: SO_0000673
so part of: LHFPL5
location: join(15838..16252,19595..19831,21046..21059)
location: region:15838-21059:1
so has part: feature:15838-16252:1:exon
so has part: feature:19595-19831:1:exon
so has part: feature:21046-21059:1:exon

XP_008497682.1
type: Protein
SIO_000068: ncbiprotein

position:15838:1
position: 15838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21059:1
position: 21059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15838-16252:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19595-19831:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:21046-21059:1:exon

LHFPL5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LHFPL5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LHFPL tetraspan subfamily member 5 protein isoform X2
translation: MMSKLLPAQEAARIYHTNYPYWIGDSIDTPQAGYFGLFSYCIGNALTGELICKGSPLDFGTIPSSAFKTAMFFVGISTFLIIGTILCFSLFFFCNAATVYKVCAWMQLAAATGLMIGCLIYPDGWDSGEVRRLCGDKTDKYTLGACTVRWAYILCIIGILDALILSFLAFVLGNRQDNLLPSDFKAESKEEGE
SIO_010081: LHFPL5
subclass of: SO_0000673
so part of: LHFPL5
location: join(15838..15894,15979..16252,19595..19831,21046..21059)
location: region:15838-21059:1
so has part: feature:15838-15894:1:exon
so has part: feature:15979-16252:1:exon
so has part: feature:19595-19831:1:exon
so has part: feature:21046-21059:1:exon

XP_030321211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15838-15894:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15979-16252:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:19595-19831:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21046-21059:1:exon

SRPK1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SRPK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(22425..51358)
location: region:22425-51358:-1
so has part: feature:22425-51358:-1:exon
subclass of: SO_0000010

103533675
type: Gene
SIO_000068: ncbigene

position:22425:-1
position: 22425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51358:-1
position: 51358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22425-51358:-1:exon

SRPK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SRPK1
product: SRSF protein kinase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 5 long SRA reads, 28 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030465355.1
SIO_010081: SRPK1
subclass of: SO_0000673
so part of: SRPK1
location: complement(join(22425..25084,25936..26028,26445..26514,27817..27924,28831..28931,30328..30726,31209..31422,31869..31894,32970..33135,33821..33927,35268..35355,35541..35628,36033..36141,38078..38196,51106..51167,51280..51358))
location: region:22425-51358:-1
so has part: feature:51280-51358:-1:exon
so has part: feature:51106-51167:-1:exon
so has part: feature:38078-38196:-1:exon
so has part: feature:36033-36141:-1:exon
so has part: feature:35541-35628:-1:exon
so has part: feature:35268-35355:-1:exon
so has part: feature:33821-33927:-1:exon
so has part: feature:32970-33135:-1:exon
so has part: feature:31869-31894:-1:exon
so has part: feature:31209-31422:-1:exon
so has part: feature:30328-30726:-1:exon
so has part: feature:28831-28931:-1:exon
so has part: feature:27817-27924:-1:exon
so has part: feature:26445-26514:-1:exon
so has part: feature:25936-26028:-1:exon
so has part: feature:22425-25084:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:51280-51358:-1:exon

position:51280:-1
position: 51280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:51106-51167:-1:exon

position:51106:-1
position: 51106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51167:-1
position: 51167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:38078-38196:-1:exon

position:38078:-1
position: 38078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38196:-1
position: 38196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:36033-36141:-1:exon

position:36033:-1
position: 36033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36141:-1
position: 36141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:35541-35628:-1:exon

position:35541:-1
position: 35541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35628:-1
position: 35628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:35268-35355:-1:exon

position:35268:-1
position: 35268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35355:-1
position: 35355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:33821-33927:-1:exon

position:33821:-1
position: 33821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33927:-1
position: 33927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:32970-33135:-1:exon

position:32970:-1
position: 32970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33135:-1
position: 33135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:31869-31894:-1:exon

position:31869:-1
position: 31869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31894:-1
position: 31894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:31209-31422:-1:exon

position:31209:-1
position: 31209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31422:-1
position: 31422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:30328-30726:-1:exon

position:30328:-1
position: 30328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30726:-1
position: 30726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:28831-28931:-1:exon

position:28831:-1
position: 28831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28931:-1
position: 28931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:27817-27924:-1:exon

position:27817:-1
position: 27817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27924:-1
position: 27924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:26445-26514:-1:exon

position:26445:-1
position: 26445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26514:-1
position: 26514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:25936-26028:-1:exon

position:25936:-1
position: 25936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26028:-1
position: 26028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:22425-25084:-1:exon

position:25084:-1
position: 25084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SRPK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SRPK1
product: SRSF protein kinase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 long SRA read, 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030465352.1
SIO_010081: SRPK1
subclass of: SO_0000673
so part of: SRPK1
location: complement(join(22495..25084,25936..26028,26445..26514,27817..27924,28831..28931,30328..30726,31209..31422,31869..31894,32970..33135,33821..33927,35268..35355,35541..35628,36033..36141,38078..38196,41497..41969))
location: region:22495-41969:-1
so has part: feature:41497-41969:-1:exon
so has part: feature:38078-38196:-1:exon
so has part: feature:36033-36141:-1:exon
so has part: feature:35541-35628:-1:exon
so has part: feature:35268-35355:-1:exon
so has part: feature:33821-33927:-1:exon
so has part: feature:32970-33135:-1:exon
so has part: feature:31869-31894:-1:exon
so has part: feature:31209-31422:-1:exon
so has part: feature:30328-30726:-1:exon
so has part: feature:28831-28931:-1:exon
so has part: feature:27817-27924:-1:exon
so has part: feature:26445-26514:-1:exon
so has part: feature:25936-26028:-1:exon
so has part: feature:22495-25084:-1:exon

position:22495:-1
position: 22495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41969:-1
position: 41969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41497-41969:-1:exon

position:41497:-1
position: 41497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:38078-38196:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:36033-36141:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:35541-35628:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:35268-35355:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:33821-33927:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:32970-33135:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:31869-31894:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:31209-31422:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:30328-30726:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:28831-28931:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27817-27924:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:26445-26514:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:25936-26028:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:22495-25084:-1:exon

SRPK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SRPK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SRSF protein kinase 1 isoform X1
translation: MALSKTIGLSPGISLAMGGRASCRPDNQHRGPAAHSENDLPEQEEEILGSDDDEQEDPNDYCKGGYHLVKIGDLFNARYHVIRKLGWGHFSTVWLAWDIQGRRFVAMKVVKSAEHYTETALDEIKLLKSVRNSDPNDPSKERVVQLLDDFKISGVNGSHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIKQVLQGLDYLHTKCRIIHTDIKPENILLCVNDQYIRRLAAEATEWQRSGAPPPSGSAVSTAPQPKPADKMSKNKKKKLKKKQKRQAELLEKRMQEIEEMEKEASPGQTQPEEEEEAQSPLEMLIKVSPPEENINKKTAEEQSVLMESSVEKCVTEINLNGVIQLTDFPDSSNQGSVQLEDDLHNANDCCHPKENFHTCDYSQTNGDSENRPQKAMSDSLPLVPEDSMVCQPTPNQEQALSEQEMNHLQESIRTETPSEDENENHSPTDNKGKSTAGNFLLNPLEPKNADKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGVDYSRDEDHIALIIELLGKIPRKLILAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWAQDEAAAFTDFLLPMLELIPEKRATAAECLRHPWLNS
SIO_010081: SRPK1
subclass of: SO_0000673
so part of: SRPK1
location: complement(join(24900..25084,25936..26028,26445..26514,27817..27924,28831..28931,30328..30726,31209..31422,31869..31894,32970..33135,33821..33927,35268..35355,35541..35628,36033..36141,38078..38196,41497..41567))
location: region:24900-41567:-1
so has part: feature:41497-41567:-1:exon
so has part: feature:38078-38196:-1:exon
so has part: feature:36033-36141:-1:exon
so has part: feature:35541-35628:-1:exon
so has part: feature:35268-35355:-1:exon
so has part: feature:33821-33927:-1:exon
so has part: feature:32970-33135:-1:exon
so has part: feature:31869-31894:-1:exon
so has part: feature:31209-31422:-1:exon
so has part: feature:30328-30726:-1:exon
so has part: feature:28831-28931:-1:exon
so has part: feature:27817-27924:-1:exon
so has part: feature:26445-26514:-1:exon
so has part: feature:25936-26028:-1:exon
so has part: feature:24900-25084:-1:exon

XP_030321212.1
type: Protein
SIO_000068: ncbiprotein

position:24900:-1
position: 24900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41567:-1
position: 41567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41497-41567:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:38078-38196:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:36033-36141:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:35541-35628:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:35268-35355:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:33821-33927:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:32970-33135:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:31869-31894:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:31209-31422:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:30328-30726:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:28831-28931:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:27817-27924:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:26445-26514:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:25936-26028:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:24900-25084:-1:exon

SRPK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SRPK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SRSF protein kinase 1 isoform X2
translation: MKVVKSAEHYTETALDEIKLLKSVRNSDPNDPSKERVVQLLDDFKISGVNGSHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIKQVLQGLDYLHTKCRIIHTDIKPENILLCVNDQYIRRLAAEATEWQRSGAPPPSGSAVSTAPQPKPADKMSKNKKKKLKKKQKRQAELLEKRMQEIEEMEKEASPGQTQPEEEEEAQSPLEMLIKVSPPEENINKKTAEEQSVLMESSVEKCVTEINLNGVIQLTDFPDSSNQGSVQLEDDLHNANDCCHPKENFHTCDYSQTNGDSENRPQKAMSDSLPLVPEDSMVCQPTPNQEQALSEQEMNHLQESIRTETPSEDENENHSPTDNKGKSTAGNFLLNPLEPKNADKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGVDYSRDEDHIALIIELLGKIPRKLILAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWAQDEAAAFTDFLLPMLELIPEKRATAAECLRHPWLNS
SIO_010081: SRPK1
subclass of: SO_0000673
so part of: SRPK1
location: complement(join(24900..25084,25936..26028,26445..26514,27817..27924,28831..28931,30328..30726,31209..31422,31869..31894,32970..33135,33821..33927,35268..35355,35541..35609))
location: region:24900-35609:-1
so has part: feature:35541-35609:-1:exon
so has part: feature:35268-35355:-1:exon
so has part: feature:33821-33927:-1:exon
so has part: feature:32970-33135:-1:exon
so has part: feature:31869-31894:-1:exon
so has part: feature:31209-31422:-1:exon
so has part: feature:30328-30726:-1:exon
so has part: feature:28831-28931:-1:exon
so has part: feature:27817-27924:-1:exon
so has part: feature:26445-26514:-1:exon
so has part: feature:25936-26028:-1:exon
so has part: feature:24900-25084:-1:exon

XP_030321215.1
type: Protein
SIO_000068: ncbiprotein

position:35609:-1
position: 35609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35541-35609:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:35268-35355:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:33821-33927:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:32970-33135:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:31869-31894:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:31209-31422:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:30328-30726:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:28831-28931:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:27817-27924:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:26445-26514:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:25936-26028:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:24900-25084:-1:exon

MAPK14
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: MAPK14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 70881..97589
location: region:70881-97589:1
so has part: feature:70881-97589:1:exon
subclass of: SO_0000010

103538019
type: Gene
SIO_000068: ncbigene

position:70881:1
position: 70881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97589:1
position: 97589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70881-97589:1:exon

MAPK14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MAPK14
product: mitogen-activated protein kinase 14, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 51 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030465360.1
SIO_010081: MAPK14
subclass of: SO_0000673
so part of: MAPK14
location: join(70881..71139,78898..79027,82447..82505,82878..82989,83490..83519,83990..84037,84503..84617,85568..85639,91188..91267,93944..94022,94309..94482,95193..97589)
location: region:70881-97589:1
so has part: feature:70881-71139:1:exon
so has part: feature:78898-79027:1:exon
so has part: feature:82447-82505:1:exon
so has part: feature:82878-82989:1:exon
so has part: feature:83490-83519:1:exon
so has part: feature:83990-84037:1:exon
so has part: feature:84503-84617:1:exon
so has part: feature:85568-85639:1:exon
so has part: feature:91188-91267:1:exon
so has part: feature:93944-94022:1:exon
so has part: feature:94309-94482:1:exon
so has part: feature:95193-97589:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:70881-71139:1:exon

position:71139:1
position: 71139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:78898-79027:1:exon

position:78898:1
position: 78898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79027:1
position: 79027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:82447-82505:1:exon

position:82447:1
position: 82447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82505:1
position: 82505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:82878-82989:1:exon

position:82878:1
position: 82878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82989:1
position: 82989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:83490-83519:1:exon

position:83490:1
position: 83490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83519:1
position: 83519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:83990-84037:1:exon

position:83990:1
position: 83990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84037:1
position: 84037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:84503-84617:1:exon

position:84503:1
position: 84503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84617:1
position: 84617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:85568-85639:1:exon

position:85568:1
position: 85568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85639:1
position: 85639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:91188-91267:1:exon

position:91188:1
position: 91188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91267:1
position: 91267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:93944-94022:1:exon

position:93944:1
position: 93944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94022:1
position: 94022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:94309-94482:1:exon

position:94309:1
position: 94309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94482:1
position: 94482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:95193-97589:1:exon

position:95193:1
position: 95193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAPK14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MAPK14
product: mitogen-activated protein kinase 14, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 1 long SRA read, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_030465361.1
SIO_010081: MAPK14
subclass of: SO_0000673
so part of: MAPK14
location: join(70881..71139,78898..79027,82447..82505,82878..82989,83490..83519,83990..84037,84503..84617,85568..85639,93332..93411,93944..94022,94309..94482,95193..97589)
location: region:70881-97589:1
so has part: feature:70881-71139:1:exon
so has part: feature:78898-79027:1:exon
so has part: feature:82447-82505:1:exon
so has part: feature:82878-82989:1:exon
so has part: feature:83490-83519:1:exon
so has part: feature:83990-84037:1:exon
so has part: feature:84503-84617:1:exon
so has part: feature:85568-85639:1:exon
so has part: feature:93332-93411:1:exon
so has part: feature:93944-94022:1:exon
so has part: feature:94309-94482:1:exon
so has part: feature:95193-97589:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:70881-71139:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78898-79027:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82447-82505:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:82878-82989:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83490-83519:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83990-84037:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:84503-84617:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85568-85639:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:93332-93411:1:exon

position:93332:1
position: 93332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93411:1
position: 93411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:93944-94022:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:94309-94482:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:95193-97589:1:exon

MAPK14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MAPK14
product: mitogen-activated protein kinase 14, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030465363.1
SIO_010081: MAPK14
subclass of: SO_0000673
so part of: MAPK14
location: join(70891..71139,78898..79027,82447..82505,82878..82989,83990..84037,84503..84617,85568..85639,93332..93411,93944..94022,94309..94482,95193..97589)
location: region:70891-97589:1
so has part: feature:70891-71139:1:exon
so has part: feature:78898-79027:1:exon
so has part: feature:82447-82505:1:exon
so has part: feature:82878-82989:1:exon
so has part: feature:83990-84037:1:exon
so has part: feature:84503-84617:1:exon
so has part: feature:85568-85639:1:exon
so has part: feature:93332-93411:1:exon
so has part: feature:93944-94022:1:exon
so has part: feature:94309-94482:1:exon
so has part: feature:95193-97589:1:exon

position:70891:1
position: 70891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70891-71139:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78898-79027:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82447-82505:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:82878-82989:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83990-84037:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:84503-84617:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:85568-85639:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:93332-93411:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:93944-94022:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:94309-94482:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:95193-97589:1:exon

MAPK14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MAPK14
product: mitogen-activated protein kinase 14, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030465362.1
SIO_010081: MAPK14
subclass of: SO_0000673
so part of: MAPK14
location: join(70892..71139,78898..79027,82447..82505,82878..82989,83990..84037,84503..84617,85568..85639,91188..91267,93944..94022,94309..94482,95193..97589)
location: region:70892-97589:1
so has part: feature:70892-71139:1:exon
so has part: feature:78898-79027:1:exon
so has part: feature:82447-82505:1:exon
so has part: feature:82878-82989:1:exon
so has part: feature:83990-84037:1:exon
so has part: feature:84503-84617:1:exon
so has part: feature:85568-85639:1:exon
so has part: feature:91188-91267:1:exon
so has part: feature:93944-94022:1:exon
so has part: feature:94309-94482:1:exon
so has part: feature:95193-97589:1:exon

position:70892:1
position: 70892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70892-71139:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78898-79027:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82447-82505:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:82878-82989:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83990-84037:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:84503-84617:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:85568-85639:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:91188-91267:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:93944-94022:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:94309-94482:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:95193-97589:1:exon

MAPK14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MAPK14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase 14 isoform X1
translation: MSQERPKFYRQELNKTVWEVPERYQNLSPVGSGAYGSVCSAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAKSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGPELLKKISSESARNYIQSLSYMPKMNFENVFIGANPLAVDLLEKMLVLDTDKRITAAEALAHAYFAQYHDPDDEPVADPYDQSFESRELEIEEWKSLTYDEVISFVPPPLDQEEMES
SIO_010081: MAPK14
subclass of: SO_0000673
so part of: MAPK14
location: join(71024..71139,78898..79027,82447..82505,82878..82989,83490..83519,83990..84037,84503..84617,85568..85639,91188..91267,93944..94022,94309..94482,95193..95260)
location: region:71024-95260:1
so has part: feature:71024-71139:1:exon
so has part: feature:78898-79027:1:exon
so has part: feature:82447-82505:1:exon
so has part: feature:82878-82989:1:exon
so has part: feature:83490-83519:1:exon
so has part: feature:83990-84037:1:exon
so has part: feature:84503-84617:1:exon
so has part: feature:85568-85639:1:exon
so has part: feature:91188-91267:1:exon
so has part: feature:93944-94022:1:exon
so has part: feature:94309-94482:1:exon
so has part: feature:95193-95260:1:exon

XP_030321220.1
type: Protein
SIO_000068: ncbiprotein

position:71024:1
position: 71024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95260:1
position: 95260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71024-71139:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78898-79027:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82447-82505:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:82878-82989:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83490-83519:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83990-84037:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:84503-84617:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85568-85639:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:91188-91267:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:93944-94022:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:94309-94482:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:95193-95260:1:exon

MAPK14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MAPK14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase 14 isoform X2
translation: MSQERPKFYRQELNKTVWEVPERYQNLSPVGSGAYGSVCSAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAKSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPAYLINRMPSHEARNYIQSLSYMPKMNFENVFIGANPLAVDLLEKMLVLDTDKRITAAEALAHAYFAQYHDPDDEPVADPYDQSFESRELEIEEWKSLTYDEVISFVPPPLDQEEMES
SIO_010081: MAPK14
subclass of: SO_0000673
so part of: MAPK14
location: join(71024..71139,78898..79027,82447..82505,82878..82989,83490..83519,83990..84037,84503..84617,85568..85639,93332..93411,93944..94022,94309..94482,95193..95260)
location: region:71024-95260:1
so has part: feature:71024-71139:1:exon
so has part: feature:78898-79027:1:exon
so has part: feature:82447-82505:1:exon
so has part: feature:82878-82989:1:exon
so has part: feature:83490-83519:1:exon
so has part: feature:83990-84037:1:exon
so has part: feature:84503-84617:1:exon
so has part: feature:85568-85639:1:exon
so has part: feature:93332-93411:1:exon
so has part: feature:93944-94022:1:exon
so has part: feature:94309-94482:1:exon
so has part: feature:95193-95260:1:exon

XP_030321221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71024-71139:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78898-79027:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82447-82505:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:82878-82989:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83490-83519:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83990-84037:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:84503-84617:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85568-85639:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:93332-93411:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:93944-94022:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:94309-94482:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:95193-95260:1:exon

MAPK14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MAPK14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase 14 isoform X3
translation: MSQERPKFYRQELNKTVWEVPERYQNLSPVGSGAYGSVCSAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAKSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGPELLKKISSESARNYIQSLSYMPKMNFENVFIGANPLAVDLLEKMLVLDTDKRITAAEALAHAYFAQYHDPDDEPVADPYDQSFESRELEIEEWKSLTYDEVISFVPPPLDQEEMES
SIO_010081: MAPK14
subclass of: SO_0000673
so part of: MAPK14
location: join(71024..71139,78898..79027,82447..82505,82878..82989,83990..84037,84503..84617,85568..85639,91188..91267,93944..94022,94309..94482,95193..95260)
location: region:71024-95260:1
so has part: feature:71024-71139:1:exon
so has part: feature:78898-79027:1:exon
so has part: feature:82447-82505:1:exon
so has part: feature:82878-82989:1:exon
so has part: feature:83990-84037:1:exon
so has part: feature:84503-84617:1:exon
so has part: feature:85568-85639:1:exon
so has part: feature:91188-91267:1:exon
so has part: feature:93944-94022:1:exon
so has part: feature:94309-94482:1:exon
so has part: feature:95193-95260:1:exon

XP_030321222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71024-71139:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78898-79027:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82447-82505:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:82878-82989:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83990-84037:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:84503-84617:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:85568-85639:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:91188-91267:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:93944-94022:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:94309-94482:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:95193-95260:1:exon

MAPK14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MAPK14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase 14 isoform X4
translation: MSQERPKFYRQELNKTVWEVPERYQNLSPVGSGAYGSVCSAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAKSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPAYLINRMPSHEARNYIQSLSYMPKMNFENVFIGANPLAVDLLEKMLVLDTDKRITAAEALAHAYFAQYHDPDDEPVADPYDQSFESRELEIEEWKSLTYDEVISFVPPPLDQEEMES
SIO_010081: MAPK14
subclass of: SO_0000673
so part of: MAPK14
location: join(71024..71139,78898..79027,82447..82505,82878..82989,83990..84037,84503..84617,85568..85639,93332..93411,93944..94022,94309..94482,95193..95260)
location: region:71024-95260:1
so has part: feature:71024-71139:1:exon
so has part: feature:78898-79027:1:exon
so has part: feature:82447-82505:1:exon
so has part: feature:82878-82989:1:exon
so has part: feature:83990-84037:1:exon
so has part: feature:84503-84617:1:exon
so has part: feature:85568-85639:1:exon
so has part: feature:93332-93411:1:exon
so has part: feature:93944-94022:1:exon
so has part: feature:94309-94482:1:exon
so has part: feature:95193-95260:1:exon

XP_030321223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71024-71139:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78898-79027:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82447-82505:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:82878-82989:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83990-84037:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:84503-84617:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:85568-85639:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:93332-93411:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:93944-94022:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:94309-94482:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:95193-95260:1:exon

MAPK13
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: MAPK13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 99791..111994
location: region:99791-111994:1
so has part: feature:99791-111994:1:exon
subclass of: SO_0000010

103533580
type: Gene
SIO_000068: ncbigene

position:99791:1
position: 99791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111994:1
position: 111994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99791-111994:1:exon

MAPK13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MAPK13
product: mitogen-activated protein kinase 13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_008499462.2
SIO_010081: MAPK13
subclass of: SO_0000673
so part of: MAPK13
location: join(99791..100691,104181..104310,104649..104707,105769..105877,106882..106911,107316..107363,108249..108363,108745..108816,109329..109408,109943..110021,111189..111365,111657..111994)
location: region:99791-111994:1
so has part: feature:99791-100691:1:exon
so has part: feature:104181-104310:1:exon
so has part: feature:104649-104707:1:exon
so has part: feature:105769-105877:1:exon
so has part: feature:106882-106911:1:exon
so has part: feature:107316-107363:1:exon
so has part: feature:108249-108363:1:exon
so has part: feature:108745-108816:1:exon
so has part: feature:109329-109408:1:exon
so has part: feature:109943-110021:1:exon
so has part: feature:111189-111365:1:exon
so has part: feature:111657-111994:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:99791-100691:1:exon

position:100691:1
position: 100691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:104181-104310:1:exon

position:104181:1
position: 104181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104310:1
position: 104310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:104649-104707:1:exon

position:104649:1
position: 104649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104707:1
position: 104707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:105769-105877:1:exon

position:105769:1
position: 105769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105877:1
position: 105877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:106882-106911:1:exon

position:106882:1
position: 106882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106911:1
position: 106911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:107316-107363:1:exon

position:107316:1
position: 107316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107363:1
position: 107363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:108249-108363:1:exon

position:108249:1
position: 108249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108363:1
position: 108363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:108745-108816:1:exon

position:108745:1
position: 108745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108816:1
position: 108816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:109329-109408:1:exon

position:109329:1
position: 109329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109408:1
position: 109408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:109943-110021:1:exon

position:109943:1
position: 109943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110021:1
position: 110021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:111189-111365:1:exon

position:111189:1
position: 111189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111365:1
position: 111365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:111657-111994:1:exon

position:111657:1
position: 111657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAPK13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MAPK13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase 13
translation: MNIARRRGFYRQEVNKTLWELPRRYTALHPLGSGAYGSVCSAIDKKTGEKVAIKKLCRPFQSQIFAKRAYRELMLLKHMQHENVIGLLDVFTSAPSYHGFQDFYLVMPYMRTDLQKIMGHEFSDEKIQYLVYQMLKGLKYIHSAGIIHRDLKPGNLAVNEDCQLKILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSIGCIMAEMLTGKTLFKGKDYLDQLTQILRVTGHPGEDFVEKLEDKAAKSYIKSLPKIPKKDLSVLFPKANPQAVDLLDKMLQLDVEKRLTATEALAHPYFDQFRDVEEETEAQESYDDSLEHEKLSIDEWRKHIYKEILSFSPIARKDSKKHSGMSL
SIO_010081: MAPK13
subclass of: SO_0000673
so part of: MAPK13
location: join(100573..100691,104181..104310,104649..104707,105769..105877,106882..106911,107316..107363,108249..108363,108745..108816,109329..109408,109943..110021,111189..111365,111657..111736)
location: region:100573-111736:1
so has part: feature:100573-100691:1:exon
so has part: feature:104181-104310:1:exon
so has part: feature:104649-104707:1:exon
so has part: feature:105769-105877:1:exon
so has part: feature:106882-106911:1:exon
so has part: feature:107316-107363:1:exon
so has part: feature:108249-108363:1:exon
so has part: feature:108745-108816:1:exon
so has part: feature:109329-109408:1:exon
so has part: feature:109943-110021:1:exon
so has part: feature:111189-111365:1:exon
so has part: feature:111657-111736:1:exon

XP_008497684.1
type: Protein
SIO_000068: ncbiprotein

position:100573:1
position: 100573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111736:1
position: 111736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100573-100691:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104181-104310:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104649-104707:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:105769-105877:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:106882-106911:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:107316-107363:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108249-108363:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108745-108816:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109329-109408:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:109943-110021:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:111189-111365:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:111657-111736:1:exon

LOC115599700
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599700
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(116340..119912)
location: region:116340-119912:-1
so has part: feature:116340-119912:-1:exon
subclass of: SO_0000011

115599700
type: Gene
SIO_000068: ncbigene

position:116340:-1
position: 116340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119912:-1
position: 119912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116340-119912:-1:exon

LOC115599700
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599700
product: uncharacterized LOC115599700
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_003988563.1
SIO_010081: LOC115599700
subclass of: SO_0000673
so part of: LOC115599700
location: complement(join(116340..116351,116453..116826,119665..119912))
location: region:116340-119912:-1
so has part: feature:119665-119912:-1:exon
so has part: feature:116453-116826:-1:exon
so has part: feature:116340-116351:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:119665-119912:-1:exon

position:119665:-1
position: 119665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:116453-116826:-1:exon

position:116453:-1
position: 116453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116826:-1
position: 116826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:116340-116351:-1:exon

position:116351:-1
position: 116351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BRPF3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: BRPF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 119288..143823
location: region:119288-143823:1
so has part: feature:119288-143823:1:exon
subclass of: SO_0000010

103533581
type: Gene
SIO_000068: ncbigene

position:119288:1
position: 119288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143823:1
position: 143823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119288-143823:1:exon

BRPF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: BRPF3
product: bromodomain and PHD finger containing 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 1 long SRA read, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_030465349.1
SIO_010081: BRPF3
subclass of: SO_0000673
so part of: BRPF3
location: join(119288..119602,125251..126653,127765..127921,129327..129458,131278..131406,131805..132117,132907..133161,133640..134134,134631..134724,137190..137287,138888..138985,139286..139440,141347..143823)
location: region:119288-143823:1
so has part: feature:119288-119602:1:exon
so has part: feature:125251-126653:1:exon
so has part: feature:127765-127921:1:exon
so has part: feature:129327-129458:1:exon
so has part: feature:131278-131406:1:exon
so has part: feature:131805-132117:1:exon
so has part: feature:132907-133161:1:exon
so has part: feature:133640-134134:1:exon
so has part: feature:134631-134724:1:exon
so has part: feature:137190-137287:1:exon
so has part: feature:138888-138985:1:exon
so has part: feature:139286-139440:1:exon
so has part: feature:141347-143823:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:119288-119602:1:exon

position:119602:1
position: 119602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:125251-126653:1:exon

position:125251:1
position: 125251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126653:1
position: 126653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:127765-127921:1:exon

position:127765:1
position: 127765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127921:1
position: 127921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:129327-129458:1:exon

position:129327:1
position: 129327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129458:1
position: 129458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:131278-131406:1:exon

position:131278:1
position: 131278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131406:1
position: 131406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:131805-132117:1:exon

position:131805:1
position: 131805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132117:1
position: 132117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:132907-133161:1:exon

position:132907:1
position: 132907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133161:1
position: 133161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:133640-134134:1:exon

position:133640:1
position: 133640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134134:1
position: 134134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:134631-134724:1:exon

position:134631:1
position: 134631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134724:1
position: 134724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:137190-137287:1:exon

position:137190:1
position: 137190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137287:1
position: 137287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:138888-138985:1:exon

position:138888:1
position: 138888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138985:1
position: 138985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:139286-139440:1:exon

position:139286:1
position: 139286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139440:1
position: 139440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:141347-143823:1:exon

position:141347:1
position: 141347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BRPF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: BRPF3
product: bromodomain and PHD finger containing 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030465345.1
SIO_010081: BRPF3
subclass of: SO_0000673
so part of: BRPF3
location: join(119288..119602,125251..126653,127765..127921,129327..129458,131278..131406,131805..132117,132907..133161,133640..134134,134631..134724,137190..137287,138888..138985,139286..139440,141347..141488,142589..143823)
location: region:119288-143823:1
so has part: feature:119288-119602:1:exon
so has part: feature:125251-126653:1:exon
so has part: feature:127765-127921:1:exon
so has part: feature:129327-129458:1:exon
so has part: feature:131278-131406:1:exon
so has part: feature:131805-132117:1:exon
so has part: feature:132907-133161:1:exon
so has part: feature:133640-134134:1:exon
so has part: feature:134631-134724:1:exon
so has part: feature:137190-137287:1:exon
so has part: feature:138888-138985:1:exon
so has part: feature:139286-139440:1:exon
so has part: feature:141347-141488:1:exon
so has part: feature:142589-143823:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:119288-119602:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:125251-126653:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:127765-127921:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:129327-129458:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:131278-131406:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131805-132117:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:132907-133161:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:133640-134134:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:134631-134724:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:137190-137287:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:138888-138985:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:139286-139440:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:141347-141488:1:exon

position:141488:1
position: 141488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:142589-143823:1:exon

position:142589:1
position: 142589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BRPF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: BRPF3
product: bromodomain and PHD finger containing 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 long SRA read, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_030465350.1
SIO_010081: BRPF3
subclass of: SO_0000673
so part of: BRPF3
location: join(119288..119602,125251..126653,127765..127921,129327..129458,131278..131406,131805..132117,132907..133161,133643..134134,134631..134724,137190..137287,138888..138985,139286..139440,141347..143823)
location: region:119288-143823:1
so has part: feature:119288-119602:1:exon
so has part: feature:125251-126653:1:exon
so has part: feature:127765-127921:1:exon
so has part: feature:129327-129458:1:exon
so has part: feature:131278-131406:1:exon
so has part: feature:131805-132117:1:exon
so has part: feature:132907-133161:1:exon
so has part: feature:133643-134134:1:exon
so has part: feature:134631-134724:1:exon
so has part: feature:137190-137287:1:exon
so has part: feature:138888-138985:1:exon
so has part: feature:139286-139440:1:exon
so has part: feature:141347-143823:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:119288-119602:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:125251-126653:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:127765-127921:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:129327-129458:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:131278-131406:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131805-132117:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:132907-133161:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:133643-134134:1:exon

position:133643:1
position: 133643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:134631-134724:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:137190-137287:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:138888-138985:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:139286-139440:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:141347-143823:1:exon

BRPF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: BRPF3
product: bromodomain and PHD finger containing 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030465347.1
SIO_010081: BRPF3
subclass of: SO_0000673
so part of: BRPF3
location: join(119288..119602,125251..126653,127765..127921,129327..129458,131278..131406,131805..132117,132907..133161,133643..134134,134631..134724,137190..137287,138888..138985,139286..139440,141347..141488,142589..143823)
location: region:119288-143823:1
so has part: feature:119288-119602:1:exon
so has part: feature:125251-126653:1:exon
so has part: feature:127765-127921:1:exon
so has part: feature:129327-129458:1:exon
so has part: feature:131278-131406:1:exon
so has part: feature:131805-132117:1:exon
so has part: feature:132907-133161:1:exon
so has part: feature:133643-134134:1:exon
so has part: feature:134631-134724:1:exon
so has part: feature:137190-137287:1:exon
so has part: feature:138888-138985:1:exon
so has part: feature:139286-139440:1:exon
so has part: feature:141347-141488:1:exon
so has part: feature:142589-143823:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:119288-119602:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:125251-126653:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:127765-127921:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:129327-129458:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:131278-131406:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131805-132117:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:132907-133161:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:133643-134134:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:134631-134724:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:137190-137287:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:138888-138985:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:139286-139440:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:141347-141488:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:142589-143823:1:exon

BRPF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: BRPF3
product: bromodomain and PHD finger containing 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030465348.1
SIO_010081: BRPF3
subclass of: SO_0000673
so part of: BRPF3
location: join(119288..119602,125251..126653,127765..127921,129330..129458,131278..131406,131805..132117,132907..133161,133640..134134,134631..134724,137190..137287,138888..138985,139286..139440,141347..141488,142589..143823)
location: region:119288-143823:1
so has part: feature:119288-119602:1:exon
so has part: feature:125251-126653:1:exon
so has part: feature:127765-127921:1:exon
so has part: feature:129330-129458:1:exon
so has part: feature:131278-131406:1:exon
so has part: feature:131805-132117:1:exon
so has part: feature:132907-133161:1:exon
so has part: feature:133640-134134:1:exon
so has part: feature:134631-134724:1:exon
so has part: feature:137190-137287:1:exon
so has part: feature:138888-138985:1:exon
so has part: feature:139286-139440:1:exon
so has part: feature:141347-141488:1:exon
so has part: feature:142589-143823:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:119288-119602:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:125251-126653:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:127765-127921:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:129330-129458:1:exon

position:129330:1
position: 129330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:131278-131406:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131805-132117:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:132907-133161:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:133640-134134:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:134631-134724:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:137190-137287:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:138888-138985:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:139286-139440:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:141347-141488:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:142589-143823:1:exon

BRPF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: BRPF3
product: bromodomain and PHD finger containing 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030465346.1
SIO_010081: BRPF3
subclass of: SO_0000673
so part of: BRPF3
location: join(119288..119400,125251..126653,127765..127921,129327..129458,131278..131406,131805..132117,132907..133161,133640..134134,134631..134724,137190..137287,138888..138985,139286..139440,141347..141488,142589..143823)
location: region:119288-143823:1
so has part: feature:119288-119400:1:exon
so has part: feature:125251-126653:1:exon
so has part: feature:127765-127921:1:exon
so has part: feature:129327-129458:1:exon
so has part: feature:131278-131406:1:exon
so has part: feature:131805-132117:1:exon
so has part: feature:132907-133161:1:exon
so has part: feature:133640-134134:1:exon
so has part: feature:134631-134724:1:exon
so has part: feature:137190-137287:1:exon
so has part: feature:138888-138985:1:exon
so has part: feature:139286-139440:1:exon
so has part: feature:141347-141488:1:exon
so has part: feature:142589-143823:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:119288-119400:1:exon

position:119400:1
position: 119400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:125251-126653:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:127765-127921:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:129327-129458:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:131278-131406:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131805-132117:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:132907-133161:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:133640-134134:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:134631-134724:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:137190-137287:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:138888-138985:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:139286-139440:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:141347-141488:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:142589-143823:1:exon

BRPF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: BRPF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain and PHD finger-containing protein 3 isoform X1
translation: MRKPRRRSQQNLVGRRSPSPYSLKCSPTRETLTYAQAQRIVEVDIDGRLHRISIYDPLKIITEDELTAQDITECNSNKENSEQPLFPSKSKKTPSKGKKKESCSKHVSGMSLHLPQPKFRVVDSFSQPGASPLPAAYYRYIEKPPEDLEVEVEYDMDEEDLAWLEMVNEKRKDDGYGMVSPDTFELLVDRLEKESYLESRNNGAQQSLIDEDAFCCVCMDDECHNSNVILFCDICNLAVHQECYGVPYIPEGQWLCRCCLQSPSRPVDCVLCPNKGGAFKQTSDGRWAHVVCAIWIPEVCFANTVFLEPIEGINNIPPARWKLTCYICKQKGMGAAIQCHKVNCYTAFHVTCAQRAGLFMKIEPMRETSINGTTFTVRKTAYCESHSPPGMVKKGFPAASSERQKDTVKAEGEEEANLGPPKGSLKKNQVKLKQKIKKEPGDVTCGCSSLPMVTVAQIPSYRLNKICSGLSLQRKNQFMQRLHNYWLLKRQARNGVPLIRRLHSHLQSQRNAEQKEQDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKLKREQVKLQQAAMELQLTPFKVLLRTTLDLLQEKDAAQIFAEPVDLQEVPDYLEFISNPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMRYNAKDTIFHRAAVRLRDLGGAVLRHARRQAESIGFDTDVGVHLPESPKTQDFYHFSWEDVDNILLPENRAHLSLEAQLKELLEKLDMVSTMRSSGARTRRIRLLRREINSIRQKLPQQQSKTMANEEPVLQEEGLDKALREGEKADDAKPPYPPTLEPTGPAPSFSELDSLQDPPTLKPINESKSLNQLQKKVVPDRELFDKKTLQRESQAFQRLLSDNGLNGLSLPPADTPTSPPFSSVGRRTSVLFKKAKNGVKLQRGLDCSLENGENHGQVSPSRPEGERPTRKRPQSRTCSESEGEKSPRQAGQRGVTNGFAKHVESSSDSECGPGMGAGLVFEACSGLMPPKRSRGKPALSRVPFLEGVNGDSDFSSSGRTLLMSFESQAELEPLELVWAKCRGYPSYPALIIDPKMPREGLLHNGVPIPVPPVGVLKLGEQRQTEAGEKLFLVLFFDNKRTWQWLPRDKVHPLGVDDTVDKLKLMEGRKTNIRKSVQVAYDRAMVHLSRVETKHQEPTTILPFHPVGPKETQLCRQSLVVWVCIARKKTNQKSHQPNKKISLQVIFGKLMTKTFYISQGLSDFPDLFLLGLPGFGFVFFFFTFPF
SIO_010081: BRPF3
subclass of: SO_0000673
so part of: BRPF3
location: join(125269..126653,127765..127921,129327..129458,131278..131406,131805..132117,132907..133161,133640..134134,134631..134724,137190..137287,138888..138985,139286..139440,141347..141488,142589..142879)
location: region:125269-142879:1
so has part: feature:125269-126653:1:exon
so has part: feature:127765-127921:1:exon
so has part: feature:129327-129458:1:exon
so has part: feature:131278-131406:1:exon
so has part: feature:131805-132117:1:exon
so has part: feature:132907-133161:1:exon
so has part: feature:133640-134134:1:exon
so has part: feature:134631-134724:1:exon
so has part: feature:137190-137287:1:exon
so has part: feature:138888-138985:1:exon
so has part: feature:139286-139440:1:exon
so has part: feature:141347-141488:1:exon
so has part: feature:142589-142879:1:exon

XP_030321205.1
type: Protein
SIO_000068: ncbiprotein

position:125269:1
position: 125269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142879:1
position: 142879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125269-126653:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:127765-127921:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:129327-129458:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:131278-131406:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:131805-132117:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:132907-133161:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:133640-134134:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:134631-134724:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:137190-137287:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:138888-138985:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:139286-139440:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:141347-141488:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:142589-142879:1:exon

BRPF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: BRPF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain and PHD finger-containing protein 3 isoform X1
translation: MRKPRRRSQQNLVGRRSPSPYSLKCSPTRETLTYAQAQRIVEVDIDGRLHRISIYDPLKIITEDELTAQDITECNSNKENSEQPLFPSKSKKTPSKGKKKESCSKHVSGMSLHLPQPKFRVVDSFSQPGASPLPAAYYRYIEKPPEDLEVEVEYDMDEEDLAWLEMVNEKRKDDGYGMVSPDTFELLVDRLEKESYLESRNNGAQQSLIDEDAFCCVCMDDECHNSNVILFCDICNLAVHQECYGVPYIPEGQWLCRCCLQSPSRPVDCVLCPNKGGAFKQTSDGRWAHVVCAIWIPEVCFANTVFLEPIEGINNIPPARWKLTCYICKQKGMGAAIQCHKVNCYTAFHVTCAQRAGLFMKIEPMRETSINGTTFTVRKTAYCESHSPPGMVKKGFPAASSERQKDTVKAEGEEEANLGPPKGSLKKNQVKLKQKIKKEPGDVTCGCSSLPMVTVAQIPSYRLNKICSGLSLQRKNQFMQRLHNYWLLKRQARNGVPLIRRLHSHLQSQRNAEQKEQDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKLKREQVKLQQAAMELQLTPFKVLLRTTLDLLQEKDAAQIFAEPVDLQEVPDYLEFISNPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMRYNAKDTIFHRAAVRLRDLGGAVLRHARRQAESIGFDTDVGVHLPESPKTQDFYHFSWEDVDNILLPENRAHLSLEAQLKELLEKLDMVSTMRSSGARTRRIRLLRREINSIRQKLPQQQSKTMANEEPVLQEEGLDKALREGEKADDAKPPYPPTLEPTGPAPSFSELDSLQDPPTLKPINESKSLNQLQKKVVPDRELFDKKTLQRESQAFQRLLSDNGLNGLSLPPADTPTSPPFSSVGRRTSVLFKKAKNGVKLQRGLDCSLENGENHGQVSPSRPEGERPTRKRPQSRTCSESEGEKSPRQAGQRGVTNGFAKHVESSSDSECGPGMGAGLVFEACSGLMPPKRSRGKPALSRVPFLEGVNGDSDFSSSGRTLLMSFESQAELEPLELVWAKCRGYPSYPALIIDPKMPREGLLHNGVPIPVPPVGVLKLGEQRQTEAGEKLFLVLFFDNKRTWQWLPRDKVHPLGVDDTVDKLKLMEGRKTNIRKSVQVAYDRAMVHLSRVETKHQEPTTILPFHPVGPKETQLCRQSLVVWVCIARKKTNQKSHQPNKKISLQVIFGKLMTKTFYISQGLSDFPDLFLLGLPGFGFVFFFFTFPF
SIO_010081: BRPF3
subclass of: SO_0000673
so part of: BRPF3
location: join(125269..126653,127765..127921,129327..129458,131278..131406,131805..132117,132907..133161,133640..134134,134631..134724,137190..137287,138888..138985,139286..139440,141347..141488,142589..142879)
location: region:125269-142879:1
so has part: feature:125269-126653:1:exon
so has part: feature:127765-127921:1:exon
so has part: feature:129327-129458:1:exon
so has part: feature:131278-131406:1:exon
so has part: feature:131805-132117:1:exon
so has part: feature:132907-133161:1:exon
so has part: feature:133640-134134:1:exon
so has part: feature:134631-134724:1:exon
so has part: feature:137190-137287:1:exon
so has part: feature:138888-138985:1:exon
so has part: feature:139286-139440:1:exon
so has part: feature:141347-141488:1:exon
so has part: feature:142589-142879:1:exon

XP_030321206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125269-126653:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:127765-127921:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:129327-129458:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:131278-131406:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:131805-132117:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:132907-133161:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:133640-134134:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:134631-134724:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:137190-137287:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:138888-138985:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:139286-139440:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:141347-141488:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:142589-142879:1:exon

BRPF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: BRPF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain and PHD finger-containing protein 3 isoform X2
translation: MRKPRRRSQQNLVGRRSPSPYSLKCSPTRETLTYAQAQRIVEVDIDGRLHRISIYDPLKIITEDELTAQDITECNSNKENSEQPLFPSKSKKTPSKGKKKESCSKHVSGMSLHLPQPKFRVVDSFSQPGASPLPAAYYRYIEKPPEDLEVEVEYDMDEEDLAWLEMVNEKRKDDGYGMVSPDTFELLVDRLEKESYLESRNNGAQQSLIDEDAFCCVCMDDECHNSNVILFCDICNLAVHQECYGVPYIPEGQWLCRCCLQSPSRPVDCVLCPNKGGAFKQTSDGRWAHVVCAIWIPEVCFANTVFLEPIEGINNIPPARWKLTCYICKQKGMGAAIQCHKVNCYTAFHVTCAQRAGLFMKIEPMRETSINGTTFTVRKTAYCESHSPPGMVKKGFPAASSERQKDTVKAEGEEEANLGPPKGSLKKNQVKLKQKIKKEPGDVTCGCSSLPMVTVAQIPSYRLNKICSGLSLQRKNQFMQRLHNYWLLKRQARNGVPLIRRLHSHLQSQRNAEQKEQDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKLKREQVKLQQAAMELQLTPFKVLLRTTLDLLQEKDAAQIFAEPVDLQEVPDYLEFISNPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMRYNAKDTIFHRAAVRLRDLGGAVLRHARRQAESIGFDTDVGVHLPESPKTQDFYHFSWEDVDNILLPENRAHLSLEAQLKELLEKLDMVSTMRSSGARTRRIRLLRREINSIRQKLPQQQSKTMANEEPVLQEEGLDKALREGEKDDAKPPYPPTLEPTGPAPSFSELDSLQDPPTLKPINESKSLNQLQKKVVPDRELFDKKTLQRESQAFQRLLSDNGLNGLSLPPADTPTSPPFSSVGRRTSVLFKKAKNGVKLQRGLDCSLENGENHGQVSPSRPEGERPTRKRPQSRTCSESEGEKSPRQAGQRGVTNGFAKHVESSSDSECGPGMGAGLVFEACSGLMPPKRSRGKPALSRVPFLEGVNGDSDFSSSGRTLLMSFESQAELEPLELVWAKCRGYPSYPALIIDPKMPREGLLHNGVPIPVPPVGVLKLGEQRQTEAGEKLFLVLFFDNKRTWQWLPRDKVHPLGVDDTVDKLKLMEGRKTNIRKSVQVAYDRAMVHLSRVETKHQEPTTILPFHPVGPKETQLCRQSLVVWVCIARKKTNQKSHQPNKKISLQVIFGKLMTKTFYISQGLSDFPDLFLLGLPGFGFVFFFFTFPF
SIO_010081: BRPF3
subclass of: SO_0000673
so part of: BRPF3
location: join(125269..126653,127765..127921,129327..129458,131278..131406,131805..132117,132907..133161,133643..134134,134631..134724,137190..137287,138888..138985,139286..139440,141347..141488,142589..142879)
location: region:125269-142879:1
so has part: feature:125269-126653:1:exon
so has part: feature:127765-127921:1:exon
so has part: feature:129327-129458:1:exon
so has part: feature:131278-131406:1:exon
so has part: feature:131805-132117:1:exon
so has part: feature:132907-133161:1:exon
so has part: feature:133643-134134:1:exon
so has part: feature:134631-134724:1:exon
so has part: feature:137190-137287:1:exon
so has part: feature:138888-138985:1:exon
so has part: feature:139286-139440:1:exon
so has part: feature:141347-141488:1:exon
so has part: feature:142589-142879:1:exon

XP_030321207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125269-126653:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:127765-127921:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:129327-129458:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:131278-131406:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:131805-132117:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:132907-133161:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:133643-134134:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:134631-134724:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:137190-137287:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:138888-138985:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:139286-139440:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:141347-141488:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:142589-142879:1:exon

BRPF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: BRPF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain and PHD finger-containing protein 3 isoform X3
translation: MRKPRRRSQQNLVGRRSPSPYSLKCSPTRETLTYAQAQRIVEVDIDGRLHRISIYDPLKIITEDELTAQDITECNSNKENSEQPLFPSKSKKTPSKGKKKESCSKHVSGMSLHLPQPKFRVVDSFSQPGASPLPAAYYRYIEKPPEDLEVEVEYDMDEEDLAWLEMVNEKRKDDGYGMVSPDTFELLVDRLEKESYLESRNNGAQQSLIDEDAFCCVCMDDECHNSNVILFCDICNLAVHQECYGVPYIPEGQWLCRCCLQSPSRPVDCVLCPNKGGAFKQTSDGRWAHVVCAIWIPEVCFANTVFLEPIEGINNIPPARWKLTCYICKQKGMGAAIQCHKVNCYTAFHVTCAQRAGLFMKIEPMRETSINGTTFTVRKTAYCESHSPPGMVKKGFPAASSERQKDTVKAEGEEEANLGPPKGSLKKNQVKLKQKIKKEPGDVTCGCSSLPMVTVAQIPSYRLNKICSGLSLQRKNQFMQRLHNYWLLKRQARNGVPLIRRLHSHLQSQRNAEQEQDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKLKREQVKLQQAAMELQLTPFKVLLRTTLDLLQEKDAAQIFAEPVDLQEVPDYLEFISNPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMRYNAKDTIFHRAAVRLRDLGGAVLRHARRQAESIGFDTDVGVHLPESPKTQDFYHFSWEDVDNILLPENRAHLSLEAQLKELLEKLDMVSTMRSSGARTRRIRLLRREINSIRQKLPQQQSKTMANEEPVLQEEGLDKALREGEKADDAKPPYPPTLEPTGPAPSFSELDSLQDPPTLKPINESKSLNQLQKKVVPDRELFDKKTLQRESQAFQRLLSDNGLNGLSLPPADTPTSPPFSSVGRRTSVLFKKAKNGVKLQRGLDCSLENGENHGQVSPSRPEGERPTRKRPQSRTCSESEGEKSPRQAGQRGVTNGFAKHVESSSDSECGPGMGAGLVFEACSGLMPPKRSRGKPALSRVPFLEGVNGDSDFSSSGRTLLMSFESQAELEPLELVWAKCRGYPSYPALIIDPKMPREGLLHNGVPIPVPPVGVLKLGEQRQTEAGEKLFLVLFFDNKRTWQWLPRDKVHPLGVDDTVDKLKLMEGRKTNIRKSVQVAYDRAMVHLSRVETKHQEPTTILPFHPVGPKETQLCRQSLVVWVCIARKKTNQKSHQPNKKISLQVIFGKLMTKTFYISQGLSDFPDLFLLGLPGFGFVFFFFTFPF
SIO_010081: BRPF3
subclass of: SO_0000673
so part of: BRPF3
location: join(125269..126653,127765..127921,129330..129458,131278..131406,131805..132117,132907..133161,133640..134134,134631..134724,137190..137287,138888..138985,139286..139440,141347..141488,142589..142879)
location: region:125269-142879:1
so has part: feature:125269-126653:1:exon
so has part: feature:127765-127921:1:exon
so has part: feature:129330-129458:1:exon
so has part: feature:131278-131406:1:exon
so has part: feature:131805-132117:1:exon
so has part: feature:132907-133161:1:exon
so has part: feature:133640-134134:1:exon
so has part: feature:134631-134724:1:exon
so has part: feature:137190-137287:1:exon
so has part: feature:138888-138985:1:exon
so has part: feature:139286-139440:1:exon
so has part: feature:141347-141488:1:exon
so has part: feature:142589-142879:1:exon

XP_030321208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125269-126653:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:127765-127921:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:129330-129458:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:131278-131406:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:131805-132117:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:132907-133161:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:133640-134134:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:134631-134724:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:137190-137287:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:138888-138985:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:139286-139440:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:141347-141488:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:142589-142879:1:exon

BRPF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: BRPF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain and PHD finger-containing protein 3 isoform X4
translation: MRKPRRRSQQNLVGRRSPSPYSLKCSPTRETLTYAQAQRIVEVDIDGRLHRISIYDPLKIITEDELTAQDITECNSNKENSEQPLFPSKSKKTPSKGKKKESCSKHVSGMSLHLPQPKFRVVDSFSQPGASPLPAAYYRYIEKPPEDLEVEVEYDMDEEDLAWLEMVNEKRKDDGYGMVSPDTFELLVDRLEKESYLESRNNGAQQSLIDEDAFCCVCMDDECHNSNVILFCDICNLAVHQECYGVPYIPEGQWLCRCCLQSPSRPVDCVLCPNKGGAFKQTSDGRWAHVVCAIWIPEVCFANTVFLEPIEGINNIPPARWKLTCYICKQKGMGAAIQCHKVNCYTAFHVTCAQRAGLFMKIEPMRETSINGTTFTVRKTAYCESHSPPGMVKKGFPAASSERQKDTVKAEGEEEANLGPPKGSLKKNQVKLKQKIKKEPGDVTCGCSSLPMVTVAQIPSYRLNKICSGLSLQRKNQFMQRLHNYWLLKRQARNGVPLIRRLHSHLQSQRNAEQKEQDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKLKREQVKLQQAAMELQLTPFKVLLRTTLDLLQEKDAAQIFAEPVDLQEVPDYLEFISNPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMRYNAKDTIFHRAAVRLRDLGGAVLRHARRQAESIGFDTDVGVHLPESPKTQDFYHFSWEDVDNILLPENRAHLSLEAQLKELLEKLDMVSTMRSSGARTRRIRLLRREINSIRQKLPQQQSKTMANEEPVLQEEGLDKALREGEKADDAKPPYPPTLEPTGPAPSFSELDSLQDPPTLKPINESKSLNQLQKKVVPDRELFDKKTLQRESQAFQRLLSDNGLNGLSLPPADTPTSPPFSSVGRRTSVLFKKAKNGVKLQRGLDCSLENGENHGQVSPSRPEGERPTRKRPQSRTCSESEGEKSPRQAGQRGVTNGFAKHVESSSDSECGPGMGAGLVFEACSGLMPPKRSRGKPALSRVPFLEGVNGDSDFSSSGRTLLMSFESQAELEPLELVWAKCRGYPSYPALIIDPKMPREGLLHNGVPIPVPPVGVLKLGEQRQTEAGEKLFLVLFFDNKRTWQWLPRDKVHPLGVDDTVDKLKLMEGRKTNIRKSVQVAYDRAMVHLSRVRGDHPLVTSSYL
SIO_010081: BRPF3
subclass of: SO_0000673
so part of: BRPF3
location: join(125269..126653,127765..127921,129327..129458,131278..131406,131805..132117,132907..133161,133640..134134,134631..134724,137190..137287,138888..138985,139286..139440,141347..141530)
location: region:125269-141530:1
so has part: feature:125269-126653:1:exon
so has part: feature:127765-127921:1:exon
so has part: feature:129327-129458:1:exon
so has part: feature:131278-131406:1:exon
so has part: feature:131805-132117:1:exon
so has part: feature:132907-133161:1:exon
so has part: feature:133640-134134:1:exon
so has part: feature:134631-134724:1:exon
so has part: feature:137190-137287:1:exon
so has part: feature:138888-138985:1:exon
so has part: feature:139286-139440:1:exon
so has part: feature:141347-141530:1:exon

XP_030321209.1
type: Protein
SIO_000068: ncbiprotein

position:141530:1
position: 141530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125269-126653:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:127765-127921:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:129327-129458:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:131278-131406:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:131805-132117:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:132907-133161:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:133640-134134:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:134631-134724:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:137190-137287:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:138888-138985:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:139286-139440:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:141347-141530:1:exon

BRPF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: BRPF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain and PHD finger-containing protein 3 isoform X5
translation: MRKPRRRSQQNLVGRRSPSPYSLKCSPTRETLTYAQAQRIVEVDIDGRLHRISIYDPLKIITEDELTAQDITECNSNKENSEQPLFPSKSKKTPSKGKKKESCSKHVSGMSLHLPQPKFRVVDSFSQPGASPLPAAYYRYIEKPPEDLEVEVEYDMDEEDLAWLEMVNEKRKDDGYGMVSPDTFELLVDRLEKESYLESRNNGAQQSLIDEDAFCCVCMDDECHNSNVILFCDICNLAVHQECYGVPYIPEGQWLCRCCLQSPSRPVDCVLCPNKGGAFKQTSDGRWAHVVCAIWIPEVCFANTVFLEPIEGINNIPPARWKLTCYICKQKGMGAAIQCHKVNCYTAFHVTCAQRAGLFMKIEPMRETSINGTTFTVRKTAYCESHSPPGMVKKGFPAASSERQKDTVKAEGEEEANLGPPKGSLKKNQVKLKQKIKKEPGDVTCGCSSLPMVTVAQIPSYRLNKICSGLSLQRKNQFMQRLHNYWLLKRQARNGVPLIRRLHSHLQSQRNAEQKEQDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKLKREQVKLQQAAMELQLTPFKVLLRTTLDLLQEKDAAQIFAEPVDLQEVPDYLEFISNPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMRYNAKDTIFHRAAVRLRDLGGAVLRHARRQAESIGFDTDVGVHLPESPKTQDFYHFSWEDVDNILLPENRAHLSLEAQLKELLEKLDMVSTMRSSGARTRRIRLLRREINSIRQKLPQQQSKTMANEEPVLQEEGLDKALREGEKDDAKPPYPPTLEPTGPAPSFSELDSLQDPPTLKPINESKSLNQLQKKVVPDRELFDKKTLQRESQAFQRLLSDNGLNGLSLPPADTPTSPPFSSVGRRTSVLFKKAKNGVKLQRGLDCSLENGENHGQVSPSRPEGERPTRKRPQSRTCSESEGEKSPRQAGQRGVTNGFAKHVESSSDSECGPGMGAGLVFEACSGLMPPKRSRGKPALSRVPFLEGVNGDSDFSSSGRTLLMSFESQAELEPLELVWAKCRGYPSYPALIIDPKMPREGLLHNGVPIPVPPVGVLKLGEQRQTEAGEKLFLVLFFDNKRTWQWLPRDKVHPLGVDDTVDKLKLMEGRKTNIRKSVQVAYDRAMVHLSRVRGDHPLVTSSYL
SIO_010081: BRPF3
subclass of: SO_0000673
so part of: BRPF3
location: join(125269..126653,127765..127921,129327..129458,131278..131406,131805..132117,132907..133161,133643..134134,134631..134724,137190..137287,138888..138985,139286..139440,141347..141530)
location: region:125269-141530:1
so has part: feature:125269-126653:1:exon
so has part: feature:127765-127921:1:exon
so has part: feature:129327-129458:1:exon
so has part: feature:131278-131406:1:exon
so has part: feature:131805-132117:1:exon
so has part: feature:132907-133161:1:exon
so has part: feature:133643-134134:1:exon
so has part: feature:134631-134724:1:exon
so has part: feature:137190-137287:1:exon
so has part: feature:138888-138985:1:exon
so has part: feature:139286-139440:1:exon
so has part: feature:141347-141530:1:exon

XP_030321210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:125269-126653:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:127765-127921:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:129327-129458:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:131278-131406:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:131805-132117:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:132907-133161:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:133643-134134:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:134631-134724:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:137190-137287:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:138888-138985:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:139286-139440:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:141347-141530:1:exon

TBC1D22B
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: TBC1D22B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(145806..160095)
location: region:145806-160095:-1
so has part: feature:145806-160095:-1:exon
subclass of: SO_0000010

103533676
type: Gene
SIO_000068: ncbigene

position:145806:-1
position: 145806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160095:-1
position: 160095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145806-160095:-1:exon

TBC1D22B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TBC1D22B
product: TBC1 domain family member 22B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 1 long SRA read, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030465532.1
SIO_010081: TBC1D22B
subclass of: SO_0000673
so part of: TBC1D22B
location: complement(join(145806..147487,147914..148009,148198..148325,148620..148695,149011..149117,150188..150302,151182..151247,151656..151784,152519..152589,153061..153240,154096..154409,155351..155407,159942..160095))
location: region:145806-160095:-1
so has part: feature:159942-160095:-1:exon
so has part: feature:155351-155407:-1:exon
so has part: feature:154096-154409:-1:exon
so has part: feature:153061-153240:-1:exon
so has part: feature:152519-152589:-1:exon
so has part: feature:151656-151784:-1:exon
so has part: feature:151182-151247:-1:exon
so has part: feature:150188-150302:-1:exon
so has part: feature:149011-149117:-1:exon
so has part: feature:148620-148695:-1:exon
so has part: feature:148198-148325:-1:exon
so has part: feature:147914-148009:-1:exon
so has part: feature:145806-147487:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:159942-160095:-1:exon

position:159942:-1
position: 159942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:155351-155407:-1:exon

position:155351:-1
position: 155351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155407:-1
position: 155407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:154096-154409:-1:exon

position:154096:-1
position: 154096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154409:-1
position: 154409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:153061-153240:-1:exon

position:153061:-1
position: 153061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153240:-1
position: 153240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:152519-152589:-1:exon

position:152519:-1
position: 152519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152589:-1
position: 152589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:151656-151784:-1:exon

position:151656:-1
position: 151656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151784:-1
position: 151784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:151182-151247:-1:exon

position:151182:-1
position: 151182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151247:-1
position: 151247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:150188-150302:-1:exon

position:150188:-1
position: 150188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150302:-1
position: 150302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:149011-149117:-1:exon

position:149011:-1
position: 149011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149117:-1
position: 149117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:148620-148695:-1:exon

position:148620:-1
position: 148620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148695:-1
position: 148695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:148198-148325:-1:exon

position:148198:-1
position: 148198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148325:-1
position: 148325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:147914-148009:-1:exon

position:147914:-1
position: 147914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148009:-1
position: 148009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:145806-147487:-1:exon

position:147487:-1
position: 147487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TBC1D22B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TBC1D22B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TBC1 domain family member 22B
translation: MAAESGRQFWKRSAKLPGSIQPVYGAQHPPLDPRLTKNFIKDRSKANALPLKSKKASSFHEFARNTSDAWDIGDDEDEDFSSSSSSLQTLNSKVAKATAAQVLENHSKLRAKPERAQSALSNVPTNCKVIKSSSEAQLSRTSEEVCVRSPLQKQQSLPLRPIIPLVARISDQNASGAPPMTVREKTRLEKFRQLLSSHNTDLDELRKCSWPGVPREVRPVTWRLLSGYLPANTERRKLTLQRKREEYFGFIQQYYDSRNEEHHQDTYRQIHIDIPRTNPLIPLFQQPLVQEIFERILFIWAIRHPASGYVQGINDLVTPFFVVFLSEYVEEDVENFDVTNLSQDVLGSIEADSFWCMSKLLDGIQDNYTFAQPGIQKKVKALEELVSRIDEQVHNHFRKYEVEYLQFAFRWMNNLLMRELPLRCTIRLWDTYQSEPEGFSHFHLYVCAAFLIKWRKEILDEEDFQGLLMLLQNLPTIHWGNEEIGLLLAEAYRLKYMFADAPNHYRR
SIO_010081: TBC1D22B
subclass of: SO_0000673
so part of: TBC1D22B
location: complement(join(147359..147487,147914..148009,148198..148325,148620..148695,149011..149117,150188..150302,151182..151247,151656..151784,152519..152589,153061..153240,154096..154409,155351..155407,159942..159997))
location: region:147359-159997:-1
so has part: feature:159942-159997:-1:exon
so has part: feature:155351-155407:-1:exon
so has part: feature:154096-154409:-1:exon
so has part: feature:153061-153240:-1:exon
so has part: feature:152519-152589:-1:exon
so has part: feature:151656-151784:-1:exon
so has part: feature:151182-151247:-1:exon
so has part: feature:150188-150302:-1:exon
so has part: feature:149011-149117:-1:exon
so has part: feature:148620-148695:-1:exon
so has part: feature:148198-148325:-1:exon
so has part: feature:147914-148009:-1:exon
so has part: feature:147359-147487:-1:exon

XP_030321392.1
type: Protein
SIO_000068: ncbiprotein

position:147359:-1
position: 147359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159997:-1
position: 159997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159942-159997:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:155351-155407:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:154096-154409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:153061-153240:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:152519-152589:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:151656-151784:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:151182-151247:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:150188-150302:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:149011-149117:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:148620-148695:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:148198-148325:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:147914-148009:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:147359-147487:-1:exon

PIM1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PIM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(168533..171620)
location: region:168533-171620:-1
so has part: feature:168533-171620:-1:exon
subclass of: SO_0000010

103533678
type: Gene
SIO_000068: ncbigene

position:168533:-1
position: 168533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171620:-1
position: 171620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168533-171620:-1:exon

PIM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PIM1
product: Pim-1 proto-oncogene, serine/threonine kinase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030465622.1
SIO_010081: PIM1
subclass of: SO_0000673
so part of: PIM1
location: complement(join(168533..168844,169179..169355,170199..170565,170991..171041,171142..171248,171335..171620))
location: region:168533-171620:-1
so has part: feature:171335-171620:-1:exon
so has part: feature:171142-171248:-1:exon
so has part: feature:170991-171041:-1:exon
so has part: feature:170199-170565:-1:exon
so has part: feature:169179-169355:-1:exon
so has part: feature:168533-168844:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:171335-171620:-1:exon

position:171335:-1
position: 171335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:171142-171248:-1:exon

position:171142:-1
position: 171142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171248:-1
position: 171248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:170991-171041:-1:exon

position:170991:-1
position: 170991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171041:-1
position: 171041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:170199-170565:-1:exon

position:170199:-1
position: 170199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170565:-1
position: 170565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:169179-169355:-1:exon

position:169179:-1
position: 169179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169355:-1
position: 169355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:168533-168844:-1:exon

position:168844:-1
position: 168844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PIM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PIM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase pim-1
translation: MLLSKINSLAHLRSGTGGELHTAKLQPGKEKEPLEKLYRVGSLLGSGGFGSVYSGIRLADSIPVAIKHVARDRISEWGELPSGTRVPMEIVLLNKVGSGFRGVIQLLDWFELPDCFVLVLERPEESQDLFDFITERGSLSEELARDLFRQVLEAVRHCNNCGVLHRDIKDENIIVDLATRELKLIDFGSGTLLKDTVYTEFDGTRVYSPPEWVRYHRYHGRSATVWSLGVLLYDMVCGDVPFEQDDDIIRGQLFFRRRVSLECQHLIRWCLSMCPSDRPSLEDIFNHNWLQGIHLPQETAEIHLHSLIQGPGK
SIO_010081: PIM1
subclass of: SO_0000673
so part of: PIM1
location: complement(join(168687..168844,169179..169355,170199..170565,170991..171041,171142..171248,171335..171416))
location: region:168687-171416:-1
so has part: feature:171335-171416:-1:exon
so has part: feature:171142-171248:-1:exon
so has part: feature:170991-171041:-1:exon
so has part: feature:170199-170565:-1:exon
so has part: feature:169179-169355:-1:exon
so has part: feature:168687-168844:-1:exon

XP_030321482.1
type: Protein
SIO_000068: ncbiprotein

position:168687:-1
position: 168687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171416:-1
position: 171416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171335-171416:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:171142-171248:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:170991-171041:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:170199-170565:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:169179-169355:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:168687-168844:-1:exon

LOC115599715
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599715
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(185964..197727)
location: region:185964-197727:-1
so has part: feature:185964-197727:-1:exon
subclass of: SO_0000010

115599715
type: Gene
SIO_000068: ncbigene

position:185964:-1
position: 185964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197727:-1
position: 197727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185964-197727:-1:exon

LOC115599715
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC115599715
product: uncharacterized LOC115599715, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030465536.1
SIO_010081: LOC115599715
subclass of: SO_0000673
so part of: LOC115599715
location: complement(join(185964..186252,192949..193094,194727..194906,197390..197596,197700..197727))
location: region:185964-197727:-1
so has part: feature:197700-197727:-1:exon
so has part: feature:197390-197596:-1:exon
so has part: feature:194727-194906:-1:exon
so has part: feature:192949-193094:-1:exon
so has part: feature:185964-186252:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:197700-197727:-1:exon

position:197700:-1
position: 197700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:197390-197596:-1:exon

position:197390:-1
position: 197390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197596:-1
position: 197596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:194727-194906:-1:exon

position:194727:-1
position: 194727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194906:-1
position: 194906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:192949-193094:-1:exon

position:192949:-1
position: 192949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193094:-1
position: 193094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:185964-186252:-1:exon

position:186252:-1
position: 186252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115599715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC115599715
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115599715 isoform X3
translation: MKMGTPAPKQNETLATSWPLGCLTAMVKWSRLASHTPTQKVKPGGEASEFPVLENEEGNQAIYWNPPPFPGPSPQPFLESLQCAGCSPGGWGCRESLLPLERDSVPLLARQDMTRLPKPRRSSPKGWCPHESFTQPWWPAGLGLMSTASPHQLHPLSPSCHHQDTGMMLLCTLGHPWPPPSLWD
SIO_010081: LOC115599715
subclass of: SO_0000673
so part of: LOC115599715
location: complement(join(186078..186252,192949..193094,194727..194906,197390..197443))
location: region:186078-197443:-1
so has part: feature:197390-197443:-1:exon
so has part: feature:194727-194906:-1:exon
so has part: feature:192949-193094:-1:exon
so has part: feature:186078-186252:-1:exon

XP_030321396.1
type: Protein
SIO_000068: ncbiprotein

position:186078:-1
position: 186078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197443:-1
position: 197443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197390-197443:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:194727-194906:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192949-193094:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:186078-186252:-1:exon

LOC115599715
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9244
gene: LOC115599715
product: uncharacterized LOC115599715, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988582.1
SIO_010081: LOC115599715
so part of: LOC115599715
location: complement(join(191569..191609,191703..191918,192949..193094,194727..194906,197390..197577))
location: region:191569-197577:-1
so has part: feature:197390-197577:-1:exon
so has part: feature:194727-194906:-1:exon
so has part: feature:192949-193094:-1:exon
so has part: feature:191703-191918:-1:exon
so has part: feature:191569-191609:-1:exon

position:191569:-1
position: 191569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197577:-1
position: 197577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197390-197577:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:194727-194906:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192949-193094:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:191703-191918:-1:exon

position:191703:-1
position: 191703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191918:-1
position: 191918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:191569-191609:-1:exon

position:191609:-1
position: 191609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115599715
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9244
gene: LOC115599715
product: uncharacterized LOC115599715, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988581.1
SIO_010081: LOC115599715
so part of: LOC115599715
location: complement(join(191569..191609,191703..191921,192949..193094,194727..194906,197390..197577))
location: region:191569-197577:-1
so has part: feature:197390-197577:-1:exon
so has part: feature:194727-194906:-1:exon
so has part: feature:192949-193094:-1:exon
so has part: feature:191703-191921:-1:exon
so has part: feature:191569-191609:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:197390-197577:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:194727-194906:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192949-193094:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:191703-191921:-1:exon

position:191921:-1
position: 191921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:191569-191609:-1:exon

LOC115599715
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9244
gene: LOC115599715
product: uncharacterized LOC115599715, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988580.1
SIO_010081: LOC115599715
so part of: LOC115599715
location: complement(join(191569..191609,191703..191918,192561..192621,192949..193094,194727..194906,197390..197577))
location: region:191569-197577:-1
so has part: feature:197390-197577:-1:exon
so has part: feature:194727-194906:-1:exon
so has part: feature:192949-193094:-1:exon
so has part: feature:192561-192621:-1:exon
so has part: feature:191703-191918:-1:exon
so has part: feature:191569-191609:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:197390-197577:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:194727-194906:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192949-193094:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192561-192621:-1:exon

position:192561:-1
position: 192561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192621:-1
position: 192621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:191703-191918:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:191569-191609:-1:exon

LOC115599715
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9244
gene: LOC115599715
product: uncharacterized LOC115599715, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988578.1
SIO_010081: LOC115599715
so part of: LOC115599715
location: complement(join(191569..191609,191703..191921,192561..192621,192949..193094,194727..194906,197390..197577))
location: region:191569-197577:-1
so has part: feature:197390-197577:-1:exon
so has part: feature:194727-194906:-1:exon
so has part: feature:192949-193094:-1:exon
so has part: feature:192561-192621:-1:exon
so has part: feature:191703-191921:-1:exon
so has part: feature:191569-191609:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:197390-197577:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:194727-194906:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192949-193094:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192561-192621:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:191703-191921:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:191569-191609:-1:exon

LOC115599715
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9244
gene: LOC115599715
product: uncharacterized LOC115599715, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988579.1
SIO_010081: LOC115599715
so part of: LOC115599715
location: complement(join(191569..191609,191703..191921,192561..192621,192949..193094,194604..194671))
location: region:191569-194671:-1
so has part: feature:194604-194671:-1:exon
so has part: feature:192949-193094:-1:exon
so has part: feature:192561-192621:-1:exon
so has part: feature:191703-191921:-1:exon
so has part: feature:191569-191609:-1:exon

position:194671:-1
position: 194671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194604-194671:-1:exon

position:194604:-1
position: 194604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:192949-193094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192561-192621:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:191703-191921:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:191569-191609:-1:exon

LOC115599715
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC115599715
product: uncharacterized LOC115599715, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030465535.1
SIO_010081: LOC115599715
subclass of: SO_0000673
so part of: LOC115599715
location: complement(join(191637..191921,192561..192621,192949..193094,194727..194906,197390..197596,197700..197727))
location: region:191637-197727:-1
so has part: feature:197700-197727:-1:exon
so has part: feature:197390-197596:-1:exon
so has part: feature:194727-194906:-1:exon
so has part: feature:192949-193094:-1:exon
so has part: feature:192561-192621:-1:exon
so has part: feature:191637-191921:-1:exon

position:191637:-1
position: 191637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197700-197727:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197390-197596:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194727-194906:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192949-193094:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192561-192621:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:191637-191921:-1:exon

LOC115599715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC115599715
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115599715 isoform X2
translation: MKMGTPAPKQNETLATSWPLGCLTAMVKWSRLASHTPTQKVKPGGEASEFPVLENEEGNQAIYWNPPPFPGPSPQPFLESLQCAGCSPGGWGCRESLLPLERDSVPLLARQDMTRLPKPRRSSPKGCLLSNLLHPHWLSPSCGLPSQQHPSCDSAHCHHPNLSWTPEPTPSSQFFPGSPWWDTALCPHRILG
SIO_010081: LOC115599715
subclass of: SO_0000673
so part of: LOC115599715
location: complement(join(191784..191921,192561..192621,192949..193094,194727..194906,197390..197443))
location: region:191784-197443:-1
so has part: feature:197390-197443:-1:exon
so has part: feature:194727-194906:-1:exon
so has part: feature:192949-193094:-1:exon
so has part: feature:192561-192621:-1:exon
so has part: feature:191784-191921:-1:exon

XP_030321395.1
type: Protein
SIO_000068: ncbiprotein

position:191784:-1
position: 191784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197390-197443:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:194727-194906:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192949-193094:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192561-192621:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:191784-191921:-1:exon

LOC115599715
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC115599715
product: uncharacterized LOC115599715, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030465534.1
SIO_010081: LOC115599715
subclass of: SO_0000673
so part of: LOC115599715
location: complement(join(192388..192621,192949..193094,194727..194906,197390..197596,197700..197727))
location: region:192388-197727:-1
so has part: feature:197700-197727:-1:exon
so has part: feature:197390-197596:-1:exon
so has part: feature:194727-194906:-1:exon
so has part: feature:192949-193094:-1:exon
so has part: feature:192388-192621:-1:exon

position:192388:-1
position: 192388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197700-197727:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197390-197596:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194727-194906:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192949-193094:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192388-192621:-1:exon

LOC115599715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC115599715
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115599715 isoform X1
translation: MKMGTPAPKQNETLATSWPLGCLTAMVKWSRLASHTPTQKVKPGGEASEFPVLENEEGNQAIYWNPPPFPGPSPQPFLESLQCAGCSPGGWGCRESLLPLERDSVPLLARQDMTRLPKPRRSSPKGCLLSNLLHPHWLSPSCGLPSQVPPQRFAAPNLPPPIGEHKKAPGTAPAPVPVPQFPHLVGPRDFPMGGGLLQVVL
SIO_010081: LOC115599715
subclass of: SO_0000673
so part of: LOC115599715
location: complement(join(192396..192621,192949..193094,194727..194906,197390..197443))
location: region:192396-197443:-1
so has part: feature:197390-197443:-1:exon
so has part: feature:194727-194906:-1:exon
so has part: feature:192949-193094:-1:exon
so has part: feature:192396-192621:-1:exon

XP_030321394.1
type: Protein
SIO_000068: ncbiprotein

position:192396:-1
position: 192396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197390-197443:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:194727-194906:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192949-193094:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192396-192621:-1:exon

MTCH1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: MTCH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 199484..211375
location: region:199484-211375:1
so has part: feature:199484-211375:1:exon
subclass of: SO_0000010

103533679
type: Gene
SIO_000068: ncbigene

position:199484:1
position: 199484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211375:1
position: 211375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199484-211375:1:exon

MTCH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MTCH1
product: mitochondrial carrier 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 long SRA reads, 13 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030465459.1
SIO_010081: MTCH1
subclass of: SO_0000673
so part of: MTCH1
location: join(199484..199742,200892..200976,202161..202267,202667..202744,203024..203081,203496..203547,204159..204218,207148..207241,207599..207646,207838..207905,208611..208686,209083..211375)
location: region:199484-211375:1
so has part: feature:199484-199742:1:exon
so has part: feature:200892-200976:1:exon
so has part: feature:202161-202267:1:exon
so has part: feature:202667-202744:1:exon
so has part: feature:203024-203081:1:exon
so has part: feature:203496-203547:1:exon
so has part: feature:204159-204218:1:exon
so has part: feature:207148-207241:1:exon
so has part: feature:207599-207646:1:exon
so has part: feature:207838-207905:1:exon
so has part: feature:208611-208686:1:exon
so has part: feature:209083-211375:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:199484-199742:1:exon

position:199742:1
position: 199742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:200892-200976:1:exon

position:200892:1
position: 200892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200976:1
position: 200976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:202161-202267:1:exon

position:202161:1
position: 202161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202267:1
position: 202267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:202667-202744:1:exon

position:202667:1
position: 202667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202744:1
position: 202744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:203024-203081:1:exon

position:203024:1
position: 203024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203081:1
position: 203081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:203496-203547:1:exon

position:203496:1
position: 203496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203547:1
position: 203547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:204159-204218:1:exon

position:204159:1
position: 204159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204218:1
position: 204218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:207148-207241:1:exon

position:207148:1
position: 207148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207241:1
position: 207241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:207599-207646:1:exon

position:207599:1
position: 207599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207646:1
position: 207646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:207838-207905:1:exon

position:207838:1
position: 207838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207905:1
position: 207905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:208611-208686:1:exon

position:208611:1
position: 208611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208686:1
position: 208686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:209083-211375:1:exon

position:209083:1
position: 209083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MTCH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MTCH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial carrier homolog 1
translation: MAAPLPPVSRAPPGGTGGGRAAPGRGDTAPGRGHTAPGRGDTARSEGAEGLFVVLGAGLAAASHPLLYVKLLVQVGHEPLPPTVGRNVLGRKVLYLPGFFTYARHIVEVDGKRGLFRGLTPRLISSTLSTITRGSVKKAFPLEDMEHVSNKDDVKTSLRKVVKETSHEMMMQCVSRVVSHPLHVISMRCMVQFVGREVKYSGVFSAIGRILKEEGILGFFVGLIPHILGDVIFLWCCNLLAHFINTYAVDDNFSQASVIRSYTKFVMGIAVSMLTYPFLLVGDLMAVNNCGLRAGLPPYAPVFASWIHCWRYLSAQGQLFRGSSLLFRRAPMPAACFPID
SIO_010081: MTCH1
subclass of: SO_0000673
so part of: MTCH1
location: join(199521..199742,200892..200976,202161..202267,202667..202744,203024..203081,203496..203547,204159..204218,207148..207241,207599..207646,207838..207905,208611..208686,209083..209157)
location: region:199521-209157:1
so has part: feature:199521-199742:1:exon
so has part: feature:200892-200976:1:exon
so has part: feature:202161-202267:1:exon
so has part: feature:202667-202744:1:exon
so has part: feature:203024-203081:1:exon
so has part: feature:203496-203547:1:exon
so has part: feature:204159-204218:1:exon
so has part: feature:207148-207241:1:exon
so has part: feature:207599-207646:1:exon
so has part: feature:207838-207905:1:exon
so has part: feature:208611-208686:1:exon
so has part: feature:209083-209157:1:exon

XP_030321319.1
type: Protein
SIO_000068: ncbiprotein

position:199521:1
position: 199521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209157:1
position: 209157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199521-199742:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200892-200976:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202161-202267:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202667-202744:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:203024-203081:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:203496-203547:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:204159-204218:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:207148-207241:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:207599-207646:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:207838-207905:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:208611-208686:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:209083-209157:1:exon

PI16
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PI16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(238359..247091)
location: region:238359-247091:-1
so has part: feature:238359-247091:-1:exon
subclass of: SO_0000010

103533680
type: Gene
SIO_000068: ncbigene

position:238359:-1
position: 238359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247091:-1
position: 247091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238359-247091:-1:exon

PI16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PI16
product: peptidase inhibitor 16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030465671.1
SIO_010081: PI16
subclass of: SO_0000673
so part of: PI16
location: complement(join(238359..239720,242282..242370,243126..243235,243855..244073,246871..247091))
location: region:238359-247091:-1
so has part: feature:246871-247091:-1:exon
so has part: feature:243855-244073:-1:exon
so has part: feature:243126-243235:-1:exon
so has part: feature:242282-242370:-1:exon
so has part: feature:238359-239720:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:246871-247091:-1:exon

position:246871:-1
position: 246871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:243855-244073:-1:exon

position:243855:-1
position: 243855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244073:-1
position: 244073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:243126-243235:-1:exon

position:243126:-1
position: 243126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243235:-1
position: 243235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:242282-242370:-1:exon

position:242282:-1
position: 242282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242370:-1
position: 242370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:238359-239720:-1:exon

position:239720:-1
position: 239720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PI16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PI16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidase inhibitor 16
translation: MLSSGLPPVFLLLTALELSWSLSDEEKKIILDGHNQYRSQVSPPAMDMLKMTWDTELEAFAQAYAEKCIWDHNKERGRRGENLFAMAPILDLEFAVEDWNAEEKYYNFSTATCVPGQMCGHYTQVVWASTHQIGCGSKFCEKIDGLDTEDMYLLVCNYYPPGNVKGRKPYREGPSCSQCPQGRVCVNSLCAGSQDTEEQEADSDMDQPTAGAPTICLGLSLFLLPSVILVSLLL
SIO_010081: PI16
subclass of: SO_0000673
so part of: PI16
location: complement(join(239587..239720,242282..242370,243126..243235,243855..244073,246871..247023))
location: region:239587-247023:-1
so has part: feature:246871-247023:-1:exon
so has part: feature:243855-244073:-1:exon
so has part: feature:243126-243235:-1:exon
so has part: feature:242282-242370:-1:exon
so has part: feature:239587-239720:-1:exon

XP_030321531.1
type: Protein
SIO_000068: ncbiprotein

position:239587:-1
position: 239587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247023:-1
position: 247023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246871-247023:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243855-244073:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:243126-243235:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:242282-242370:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239587-239720:-1:exon

C26H6orf89
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: C26H6orf89
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(249610..273680)
location: region:249610-273680:-1
so has part: feature:249610-273680:-1:exon
subclass of: SO_0000010

103533582
type: Gene
SIO_000068: ncbigene

position:249610:-1
position: 249610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273680:-1
position: 273680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249610-273680:-1:exon

C26H6orf89
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9244
gene: C26H6orf89
product: chromosome 26 C6orf89 homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003988572.1
SIO_010081: C26H6orf89
so part of: C26H6orf89
location: complement(join(249610..253116,253880..254164,254682..254805,255232..255358,256848..256969,257308..257462,268647..268812,269999..270206,273603..273680))
location: region:249610-273680:-1
so has part: feature:273603-273680:-1:exon
so has part: feature:269999-270206:-1:exon
so has part: feature:268647-268812:-1:exon
so has part: feature:257308-257462:-1:exon
so has part: feature:256848-256969:-1:exon
so has part: feature:255232-255358:-1:exon
so has part: feature:254682-254805:-1:exon
so has part: feature:253880-254164:-1:exon
so has part: feature:249610-253116:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:273603-273680:-1:exon

position:273603:-1
position: 273603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:269999-270206:-1:exon

position:269999:-1
position: 269999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270206:-1
position: 270206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:268647-268812:-1:exon

position:268647:-1
position: 268647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268812:-1
position: 268812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:257308-257462:-1:exon

position:257308:-1
position: 257308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257462:-1
position: 257462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:256848-256969:-1:exon

position:256848:-1
position: 256848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256969:-1
position: 256969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:255232-255358:-1:exon

position:255232:-1
position: 255232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255358:-1
position: 255358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:254682-254805:-1:exon

position:254682:-1
position: 254682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254805:-1
position: 254805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:253880-254164:-1:exon

position:253880:-1
position: 253880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254164:-1
position: 254164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:249610-253116:-1:exon

position:253116:-1
position: 253116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C26H6orf89
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: C26H6orf89
product: chromosome 26 C6orf89 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 3 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030465445.1
SIO_010081: C26H6orf89
subclass of: SO_0000673
so part of: C26H6orf89
location: complement(join(249610..254164,254682..254805,255232..255358,256848..256969,257308..257462,268647..268812,269999..270206,273603..273680))
location: region:249610-273680:-1
so has part: feature:273603-273680:-1:exon
so has part: feature:269999-270206:-1:exon
so has part: feature:268647-268812:-1:exon
so has part: feature:257308-257462:-1:exon
so has part: feature:256848-256969:-1:exon
so has part: feature:255232-255358:-1:exon
so has part: feature:254682-254805:-1:exon
so has part: feature:249610-254164:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:273603-273680:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:269999-270206:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:268647-268812:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:257308-257462:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:256848-256969:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:255232-255358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:254682-254805:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:249610-254164:-1:exon

C26H6orf89
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: C26H6orf89
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bombesin receptor-activated protein C6orf89 homolog isoform X2
translation: MELSASELSIYDKLSETIDLVRQTGHQCGMSEKAIEKFIRQLLERNEPQRGPPRYPVLVALYKGLLTLGLVLLTVYFMIQPYSPLPPEAPLSRAHAWGSLIGHIRLLSLPIAKKYMLEKCQDWWAAGCRQNTSTLPANCTVCSAVKSLQMVTDFGELSEKLQRSQPFLIKTGQHLSYEELKHFQSQDPDLAEVIIEENSAELWSCPFFFPWNKSVNKTRILQEFFPTSSLLSFPKTVSLESCFLIRHPDLGNKSYSLHSLFAVGSGQLTLTVVPLEKCRGHCEMFKVELEAGDLGFASPDYWRMSFMAKGTEPAVVCDGAAE
SIO_010081: C26H6orf89
subclass of: SO_0000673
so part of: C26H6orf89
location: complement(join(254079..254164,254682..254805,255232..255358,256848..256969,257308..257462,268647..268812,269999..270187))
location: region:254079-270187:-1
so has part: feature:269999-270187:-1:exon
so has part: feature:268647-268812:-1:exon
so has part: feature:257308-257462:-1:exon
so has part: feature:256848-256969:-1:exon
so has part: feature:255232-255358:-1:exon
so has part: feature:254682-254805:-1:exon
so has part: feature:254079-254164:-1:exon

XP_030321305.1
type: Protein
SIO_000068: ncbiprotein

position:254079:-1
position: 254079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270187:-1
position: 270187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269999-270187:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:268647-268812:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:257308-257462:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:256848-256969:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:255232-255358:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:254682-254805:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:254079-254164:-1:exon

C26H6orf89
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: C26H6orf89
product: chromosome 26 C6orf89 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030465444.1
SIO_010081: C26H6orf89
subclass of: SO_0000673
so part of: C26H6orf89
location: complement(join(254175..254805,255232..255358,256848..256969,257308..257462,268647..268812,269999..270206,270548..270670))
location: region:254175-270670:-1
so has part: feature:270548-270670:-1:exon
so has part: feature:269999-270206:-1:exon
so has part: feature:268647-268812:-1:exon
so has part: feature:257308-257462:-1:exon
so has part: feature:256848-256969:-1:exon
so has part: feature:255232-255358:-1:exon
so has part: feature:254175-254805:-1:exon

position:254175:-1
position: 254175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270670:-1
position: 270670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270548-270670:-1:exon

position:270548:-1
position: 270548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:269999-270206:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:268647-268812:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:257308-257462:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:256848-256969:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:255232-255358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:254175-254805:-1:exon

C26H6orf89
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: C26H6orf89
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bombesin receptor-activated protein C6orf89 homolog isoform X1
translation: MELSASELSIYDKLSETIDLVRQTGHQCGMSEKAIEKFIRQLLERNEPQRGPPRYPVLVALYKGLLTLGLVLLTVYFMIQPYSPLPPEAPLSRAHAWGSLIGHIRLLSLPIAKKYMLEKCQDWWAAGCRQNTSTLPANCTVCSAVKSLQMVTDFGELSEKLQRSQPFLIKTGQHLSYEELKHFQSQDPDLAEVIIEENSAELWSCPFFFPWNKSVNKTRILQEFFPTSSLLSFPKTVSLESCFLIRHPDLGNKSYSLHSLFAVGSGQLTLTVVPLEKCRGHCEMFKVELEAGDLGESCFQLALFWLMPEKLVCAIPISRLVWPCWCRGEIWNWDCVLRHSQWDTLRS
SIO_010081: C26H6orf89
subclass of: SO_0000673
so part of: C26H6orf89
location: complement(join(254521..254805,255232..255358,256848..256969,257308..257462,268647..268812,269999..270187))
location: region:254521-270187:-1
so has part: feature:269999-270187:-1:exon
so has part: feature:268647-268812:-1:exon
so has part: feature:257308-257462:-1:exon
so has part: feature:256848-256969:-1:exon
so has part: feature:255232-255358:-1:exon
so has part: feature:254521-254805:-1:exon

XP_030321304.1
type: Protein
SIO_000068: ncbiprotein

position:254521:-1
position: 254521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269999-270187:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:268647-268812:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:257308-257462:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:256848-256969:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:255232-255358:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:254521-254805:-1:exon

CDKN1A
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: CDKN1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(280469..281546)
location: region:280469-281546:-1
so has part: feature:280469-281546:-1:exon
subclass of: SO_0000010

103533681
type: Gene
SIO_000068: ncbigene

position:280469:-1
position: 280469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281546:-1
position: 281546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280469-281546:-1:exon

CDKN1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CDKN1A
product: cyclin dependent kinase inhibitor 1A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_008499572.2
SIO_010081: CDKN1A
subclass of: SO_0000673
so part of: CDKN1A
location: complement(join(280469..280629,281114..281546))
location: region:280469-281546:-1
so has part: feature:281114-281546:-1:exon
so has part: feature:280469-280629:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:281114-281546:-1:exon

position:281114:-1
position: 281114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:280469-280629:-1:exon

position:280629:-1
position: 280629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDKN1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CDKN1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinase inhibitor 1
translation: MPLSHSKAGQMPCSSKVCRNLFGPLDHEELQNDFETLLRHQLEEAQQRWNFDFETDTPLEGPFRWERVGLAEQPDQEVHRVPSNENRSSLGHKVPSKDPLAKICPEGSQQSSEVCRAGSLQSLKRGQATMKDFYSSKRRIIHDKPNP
SIO_010081: CDKN1A
subclass of: SO_0000673
so part of: CDKN1A
location: complement(join(280580..280629,281114..281507))
location: region:280580-281507:-1
so has part: feature:281114-281507:-1:exon
so has part: feature:280580-280629:-1:exon

XP_008497794.1
type: Protein
SIO_000068: ncbiprotein

position:280580:-1
position: 280580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281507:-1
position: 281507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281114-281507:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:280580-280629:-1:exon

SRSF3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SRSF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(294198..300414)
location: region:294198-300414:-1
so has part: feature:294198-300414:-1:exon
subclass of: SO_0000010

103533584
type: Gene
SIO_000068: ncbigene

position:294198:-1
position: 294198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300414:-1
position: 300414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294198-300414:-1:exon

SRSF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SRSF3
product: serine and arginine rich splicing factor 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 43 ESTs, 2 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030465437.1
SIO_010081: SRSF3
subclass of: SO_0000673
so part of: SRSF3
location: complement(join(294198..295039,295291..295377,296339..296377,298718..298852,299295..299502,300306..300414))
location: region:294198-300414:-1
so has part: feature:300306-300414:-1:exon
so has part: feature:299295-299502:-1:exon
so has part: feature:298718-298852:-1:exon
so has part: feature:296339-296377:-1:exon
so has part: feature:295291-295377:-1:exon
so has part: feature:294198-295039:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:300306-300414:-1:exon

position:300306:-1
position: 300306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:299295-299502:-1:exon

position:299295:-1
position: 299295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299502:-1
position: 299502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:298718-298852:-1:exon

position:298718:-1
position: 298718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298852:-1
position: 298852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:296339-296377:-1:exon

position:296339:-1
position: 296339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296377:-1
position: 296377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:295291-295377:-1:exon

position:295291:-1
position: 295291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295377:-1
position: 295377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:294198-295039:-1:exon

position:295039:-1
position: 295039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SRSF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SRSF3
product: serine and arginine rich splicing factor 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030465436.1
SIO_010081: SRSF3
subclass of: SO_0000673
so part of: SRSF3
location: complement(join(294198..295039,295291..295377,296339..296377,297292..297709))
location: region:294198-297709:-1
so has part: feature:297292-297709:-1:exon
so has part: feature:296339-296377:-1:exon
so has part: feature:295291-295377:-1:exon
so has part: feature:294198-295039:-1:exon

position:297709:-1
position: 297709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297292-297709:-1:exon

position:297292:-1
position: 297292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:296339-296377:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:295291-295377:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:294198-295039:-1:exon

SRSF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SRSF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine-rich splicing factor 3 isoform X1
translation: MLFSLSLLSNLNQIGSSHLDRPHIPGQSAQLFIYQMSSQQLQQQPSANKKAGKIHNIPLRQPTKYNATSGKTFSANSSWQSVRQPHLTISSLLKPKTNHHEGEASPGAVAGPSPETEEERGHSHGRGITSLLVPSPGPAVAPGQMRGNKTVGRSCVQEVIRSEDRRSMYRTFVLF
SIO_010081: SRSF3
subclass of: SO_0000673
so part of: SRSF3
location: complement(join(294930..295039,295291..295377,296339..296377,297292..297583))
location: region:294930-297583:-1
so has part: feature:297292-297583:-1:exon
so has part: feature:296339-296377:-1:exon
so has part: feature:295291-295377:-1:exon
so has part: feature:294930-295039:-1:exon

XP_030321296.1
type: Protein
SIO_000068: ncbiprotein

position:294930:-1
position: 294930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297583:-1
position: 297583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297292-297583:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:296339-296377:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:295291-295377:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:294930-295039:-1:exon

SRSF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SRSF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine-rich splicing factor 3 isoform X2
translation: MHRDSCPLDCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRVELSNGEKRSRNRGPPPSWGRRPRDDYRRRSPPPRRRSPRRRSFSRSRSRSLSRDRRRERSLSRERNHKPSRSFSRSRSRSRSNERK
SIO_010081: SRSF3
subclass of: SO_0000673
so part of: SRSF3
location: complement(join(295012..295039,295291..295377,296339..296377,298718..298852,299295..299500))
location: region:295012-299500:-1
so has part: feature:299295-299500:-1:exon
so has part: feature:298718-298852:-1:exon
so has part: feature:296339-296377:-1:exon
so has part: feature:295291-295377:-1:exon
so has part: feature:295012-295039:-1:exon

XP_030321297.1
type: Protein
SIO_000068: ncbiprotein

position:295012:-1
position: 295012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299500:-1
position: 299500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299295-299500:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:298718-298852:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:296339-296377:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:295291-295377:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:295012-295039:-1:exon

LOC115599692
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599692
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 306264..308760
location: region:306264-308760:1
so has part: feature:306264-308760:1:exon
subclass of: SO_0000010

115599692
type: Gene
SIO_000068: ncbigene

position:306264:1
position: 306264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308760:1
position: 308760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306264-308760:1:exon

LOC115599692
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC115599692
product: parathyroid hormone 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 65% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030465312.1
SIO_010081: LOC115599692
subclass of: SO_0000673
so part of: LOC115599692
location: join(306264..306361,307657..307811,308382..308760)
location: region:306264-308760:1
so has part: feature:306264-306361:1:exon
so has part: feature:307657-307811:1:exon
so has part: feature:308382-308760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:306264-306361:1:exon

position:306361:1
position: 306361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:307657-307811:1:exon

position:307657:1
position: 307657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307811:1
position: 307811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:308382-308760:1:exon

position:308382:1
position: 308382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115599692
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC115599692
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: parathyroid hormone 4-like
translation: MFLPSRSLQMVTLMAILLACSAACQDPENKRAVTEHQLMHDKGREFQGLKRLMWLHNALGSVHTASSRDVSLSDAMWDSQKSQDPSDLYNSIGRAETPSLEVPGKEQSFPLLNQPRNVKTPKGNWKPQNLPDLLQIKVLGSRRNPSSQLQNSSC
SIO_010081: LOC115599692
subclass of: SO_0000673
so part of: LOC115599692
location: join(307726..307811,308382..308760)
location: region:307726-308760:1
so has part: feature:307726-307811:1:exon
so has part: feature:308382-308760:1:exon

XP_030321172.1
type: Protein
SIO_000068: ncbiprotein

position:307726:1
position: 307726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307726-307811:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:308382-308760:1:exon

STK38
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: STK38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 310572..325988
location: region:310572-325988:1
so has part: feature:310572-325988:1:exon
subclass of: SO_0000010

103533585
type: Gene
SIO_000068: ncbigene

position:310572:1
position: 310572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325988:1
position: 325988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310572-325988:1:exon

STK38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: STK38
product: serine/threonine kinase 38, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030465600.1
SIO_010081: STK38
subclass of: SO_0000673
so part of: STK38
location: join(310572..310807,312766..312898,315049..315100,315249..315371,315949..316032,317592..317715,318521..318675,319577..319679,320111..320172,320701..320818,320988..321111,321851..321946,322181..322275,322836..325988)
location: region:310572-325988:1
so has part: feature:310572-310807:1:exon
so has part: feature:312766-312898:1:exon
so has part: feature:315049-315100:1:exon
so has part: feature:315249-315371:1:exon
so has part: feature:315949-316032:1:exon
so has part: feature:317592-317715:1:exon
so has part: feature:318521-318675:1:exon
so has part: feature:319577-319679:1:exon
so has part: feature:320111-320172:1:exon
so has part: feature:320701-320818:1:exon
so has part: feature:320988-321111:1:exon
so has part: feature:321851-321946:1:exon
so has part: feature:322181-322275:1:exon
so has part: feature:322836-325988:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:310572-310807:1:exon

position:310807:1
position: 310807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:312766-312898:1:exon

position:312766:1
position: 312766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312898:1
position: 312898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:315049-315100:1:exon

position:315049:1
position: 315049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315100:1
position: 315100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:315249-315371:1:exon

position:315249:1
position: 315249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315371:1
position: 315371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:315949-316032:1:exon

position:315949:1
position: 315949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316032:1
position: 316032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:317592-317715:1:exon

position:317592:1
position: 317592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317715:1
position: 317715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:318521-318675:1:exon

position:318521:1
position: 318521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318675:1
position: 318675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:319577-319679:1:exon

position:319577:1
position: 319577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319679:1
position: 319679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:320111-320172:1:exon

position:320111:1
position: 320111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320172:1
position: 320172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:320701-320818:1:exon

position:320701:1
position: 320701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320818:1
position: 320818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:320988-321111:1:exon

position:320988:1
position: 320988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321111:1
position: 321111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:321851-321946:1:exon

position:321851:1
position: 321851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321946:1
position: 321946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:322181-322275:1:exon

position:322181:1
position: 322181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322275:1
position: 322275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:322836-325988:1:exon

position:322836:1
position: 322836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STK38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: STK38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase 38 isoform X1
translation: MAMTGPTPCSSMSNHTKERVTMTKVTLENFYSNLIAQHEEREMRQKKLEQMMEEEGLKDEEKRIRRSAHAQKETEFLRLKRTRLGLEDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPVSDKAKDLILRFCCEWEHRIGASGVEEIKSNPFFEGVDWEHIRERPAAISIEIKSIDDTSNFDEFPESDILKPTVATSNHPETDYKNKDWVFINYTYKRFEGLTARGAIPSYMKAGK
SIO_010081: STK38
subclass of: SO_0000673
so part of: STK38
location: join(312768..312898,315049..315100,315249..315371,315949..316032,317592..317715,318521..318675,319577..319679,320111..320172,320701..320818,320988..321111,321851..321946,322181..322275,322836..322966)
location: region:312768-322966:1
so has part: feature:312768-312898:1:exon
so has part: feature:315049-315100:1:exon
so has part: feature:315249-315371:1:exon
so has part: feature:315949-316032:1:exon
so has part: feature:317592-317715:1:exon
so has part: feature:318521-318675:1:exon
so has part: feature:319577-319679:1:exon
so has part: feature:320111-320172:1:exon
so has part: feature:320701-320818:1:exon
so has part: feature:320988-321111:1:exon
so has part: feature:321851-321946:1:exon
so has part: feature:322181-322275:1:exon
so has part: feature:322836-322966:1:exon

XP_030321460.1
type: Protein
SIO_000068: ncbiprotein

position:312768:1
position: 312768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322966:1
position: 322966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312768-312898:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:315049-315100:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:315249-315371:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:315949-316032:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:317592-317715:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:318521-318675:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:319577-319679:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:320111-320172:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:320701-320818:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:320988-321111:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:321851-321946:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:322181-322275:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:322836-322966:1:exon

STK38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: STK38
product: serine/threonine kinase 38, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030465601.1
SIO_010081: STK38
subclass of: SO_0000673
so part of: STK38
location: join(312856..312898,315049..315100,315254..315371,315949..316032,317592..317715,318521..318675,319577..319679,320111..320172,320701..320818,320988..321111,321851..321946,322181..322275,322836..325988)
location: region:312856-325988:1
so has part: feature:312856-312898:1:exon
so has part: feature:315049-315100:1:exon
so has part: feature:315254-315371:1:exon
so has part: feature:315949-316032:1:exon
so has part: feature:317592-317715:1:exon
so has part: feature:318521-318675:1:exon
so has part: feature:319577-319679:1:exon
so has part: feature:320111-320172:1:exon
so has part: feature:320701-320818:1:exon
so has part: feature:320988-321111:1:exon
so has part: feature:321851-321946:1:exon
so has part: feature:322181-322275:1:exon
so has part: feature:322836-325988:1:exon

position:312856:1
position: 312856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312856-312898:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:315049-315100:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:315254-315371:1:exon

position:315254:1
position: 315254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:315949-316032:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:317592-317715:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:318521-318675:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:319577-319679:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:320111-320172:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:320701-320818:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:320988-321111:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:321851-321946:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:322181-322275:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:322836-325988:1:exon

STK38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: STK38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase 38 isoform X2
translation: MKRIRRSAHAQKETEFLRLKRTRLGLEDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPVSDKAKDLILRFCCEWEHRIGASGVEEIKSNPFFEGVDWEHIRERPAAISIEIKSIDDTSNFDEFPESDILKPTVATSNHPETDYKNKDWVFINYTYKRFEGLTARGAIPSYMKAGK
SIO_010081: STK38
subclass of: SO_0000673
so part of: STK38
location: join(315093..315100,315254..315371,315949..316032,317592..317715,318521..318675,319577..319679,320111..320172,320701..320818,320988..321111,321851..321946,322181..322275,322836..322966)
location: region:315093-322966:1
so has part: feature:315093-315100:1:exon
so has part: feature:315254-315371:1:exon
so has part: feature:315949-316032:1:exon
so has part: feature:317592-317715:1:exon
so has part: feature:318521-318675:1:exon
so has part: feature:319577-319679:1:exon
so has part: feature:320111-320172:1:exon
so has part: feature:320701-320818:1:exon
so has part: feature:320988-321111:1:exon
so has part: feature:321851-321946:1:exon
so has part: feature:322181-322275:1:exon
so has part: feature:322836-322966:1:exon

XP_030321461.1
type: Protein
SIO_000068: ncbiprotein

position:315093:1
position: 315093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315093-315100:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:315254-315371:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:315949-316032:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:317592-317715:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:318521-318675:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:319577-319679:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:320111-320172:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:320701-320818:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:320988-321111:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:321851-321946:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:322181-322275:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:322836-322966:1:exon

KCTD20
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: KCTD20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(326359..354934)
location: region:326359-354934:-1
so has part: feature:326359-354934:-1:exon
subclass of: SO_0000010

103537798
type: Gene
SIO_000068: ncbigene

position:326359:-1
position: 326359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354934:-1
position: 354934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326359-354934:-1:exon

KCTD20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: KCTD20
product: potassium channel tetramerization domain containing 20, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 2 long SRA reads, 17 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_030465421.1
SIO_010081: KCTD20
subclass of: SO_0000673
so part of: KCTD20
location: complement(join(326359..329495,330062..330172,330665..330862,331767..331887,332401..332503,333402..333672,334333..334532,350998..351052,354871..354934))
location: region:326359-354934:-1
so has part: feature:354871-354934:-1:exon
so has part: feature:350998-351052:-1:exon
so has part: feature:334333-334532:-1:exon
so has part: feature:333402-333672:-1:exon
so has part: feature:332401-332503:-1:exon
so has part: feature:331767-331887:-1:exon
so has part: feature:330665-330862:-1:exon
so has part: feature:330062-330172:-1:exon
so has part: feature:326359-329495:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:354871-354934:-1:exon

position:354871:-1
position: 354871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:350998-351052:-1:exon

position:350998:-1
position: 350998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351052:-1
position: 351052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:334333-334532:-1:exon

position:334333:-1
position: 334333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334532:-1
position: 334532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:333402-333672:-1:exon

position:333402:-1
position: 333402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333672:-1
position: 333672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:332401-332503:-1:exon

position:332401:-1
position: 332401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332503:-1
position: 332503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:331767-331887:-1:exon

position:331767:-1
position: 331767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331887:-1
position: 331887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:330665-330862:-1:exon

position:330665:-1
position: 330665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330862:-1
position: 330862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:330062-330172:-1:exon

position:330062:-1
position: 330062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330172:-1
position: 330172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:326359-329495:-1:exon

position:329495:-1
position: 329495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KCTD20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: KCTD20
product: potassium channel tetramerization domain containing 20, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 1 long SRA read, 17 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030465423.1
SIO_010081: KCTD20
subclass of: SO_0000673
so part of: KCTD20
location: complement(join(326359..329495,330062..330172,330665..330862,331767..331887,332401..332503,333402..333672,334333..334532,354871..354930))
location: region:326359-354930:-1
so has part: feature:354871-354930:-1:exon
so has part: feature:334333-334532:-1:exon
so has part: feature:333402-333672:-1:exon
so has part: feature:332401-332503:-1:exon
so has part: feature:331767-331887:-1:exon
so has part: feature:330665-330862:-1:exon
so has part: feature:330062-330172:-1:exon
so has part: feature:326359-329495:-1:exon

position:354930:-1
position: 354930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354871-354930:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:334333-334532:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:333402-333672:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:332401-332503:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:331767-331887:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:330665-330862:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:330062-330172:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:326359-329495:-1:exon

KCTD20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: KCTD20
product: potassium channel tetramerization domain containing 20, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030465422.1
SIO_010081: KCTD20
subclass of: SO_0000673
so part of: KCTD20
location: complement(join(326359..329495,330062..330172,330665..330862,331767..331887,332401..332503,333402..333672,334333..334532,343843..343926,350998..351052,354871..354923))
location: region:326359-354923:-1
so has part: feature:354871-354923:-1:exon
so has part: feature:350998-351052:-1:exon
so has part: feature:343843-343926:-1:exon
so has part: feature:334333-334532:-1:exon
so has part: feature:333402-333672:-1:exon
so has part: feature:332401-332503:-1:exon
so has part: feature:331767-331887:-1:exon
so has part: feature:330665-330862:-1:exon
so has part: feature:330062-330172:-1:exon
so has part: feature:326359-329495:-1:exon

position:354923:-1
position: 354923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354871-354923:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:350998-351052:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:343843-343926:-1:exon

position:343843:-1
position: 343843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343926:-1
position: 343926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:334333-334532:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:333402-333672:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:332401-332503:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:331767-331887:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:330665-330862:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:330062-330172:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:326359-329495:-1:exon

KCTD20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: KCTD20
product: potassium channel tetramerization domain containing 20, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030465419.1
SIO_010081: KCTD20
subclass of: SO_0000673
so part of: KCTD20
location: complement(join(326359..329495,330062..330172,330665..330862,331767..331887,332401..332503,333402..333672,334333..334532,350789..350991))
location: region:326359-350991:-1
so has part: feature:350789-350991:-1:exon
so has part: feature:334333-334532:-1:exon
so has part: feature:333402-333672:-1:exon
so has part: feature:332401-332503:-1:exon
so has part: feature:331767-331887:-1:exon
so has part: feature:330665-330862:-1:exon
so has part: feature:330062-330172:-1:exon
so has part: feature:326359-329495:-1:exon

position:350991:-1
position: 350991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350789-350991:-1:exon

position:350789:-1
position: 350789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:334333-334532:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:333402-333672:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:332401-332503:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:331767-331887:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:330665-330862:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:330062-330172:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:326359-329495:-1:exon

KCTD20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: KCTD20
product: potassium channel tetramerization domain containing 20, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030465420.1
SIO_010081: KCTD20
subclass of: SO_0000673
so part of: KCTD20
location: complement(join(326359..329495,330062..330172,330665..330862,331767..331887,332401..332503,333402..333672,334333..334532,342320..342400))
location: region:326359-342400:-1
so has part: feature:342320-342400:-1:exon
so has part: feature:334333-334532:-1:exon
so has part: feature:333402-333672:-1:exon
so has part: feature:332401-332503:-1:exon
so has part: feature:331767-331887:-1:exon
so has part: feature:330665-330862:-1:exon
so has part: feature:330062-330172:-1:exon
so has part: feature:326359-329495:-1:exon

position:342400:-1
position: 342400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342320-342400:-1:exon

position:342320:-1
position: 342320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:334333-334532:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:333402-333672:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:332401-332503:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:331767-331887:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:330665-330862:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:330062-330172:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:326359-329495:-1:exon

KCTD20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: KCTD20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD20 isoform X1
translation: MSVERSWEYRQLSSSLRKRNQLLTARRPSMNVDCAAGTDWSRAPESRCPVENTTLAAHESEESNGVLGSHSPAAVPRTEGLDSECRHTVSPQISSMLSAPEDTHSCHFQDGNKRQAEYFSSQERHGCCTSSSSISSQTAAPEKVTLVVDGTRFAVNPQIFTAHPDTMLGRMFGPGREYNFTRPNEKGEYEIAEGISSAVFRTVLDYYKTGIINCPDGISIPDLRDTCDYLCINFDFNTIKCQDLSALLHELSNDGAHKQFDSYLEELILPIMVDSARKGERECHIVVLTDEDTVDWDEDHPPPMGEEYSQILYSSKLYRFFKYIENRDVAKAVLKERGLKNIRIGIEGYPTCKEKVKRRPGGRSEVIYNYVQRPFIQMSWEKEEGKSRHVDFQCVRSKSLTNLVSVGDDVSEDHEVIMHHPPQVDELDRLNAPFSQMAVNGLPD
SIO_010081: KCTD20
subclass of: SO_0000673
so part of: KCTD20
location: complement(join(329203..329495,330062..330172,330665..330862,331767..331887,332401..332503,333402..333672,334333..334532,350789..350826))
location: region:329203-350826:-1
so has part: feature:350789-350826:-1:exon
so has part: feature:334333-334532:-1:exon
so has part: feature:333402-333672:-1:exon
so has part: feature:332401-332503:-1:exon
so has part: feature:331767-331887:-1:exon
so has part: feature:330665-330862:-1:exon
so has part: feature:330062-330172:-1:exon
so has part: feature:329203-329495:-1:exon

XP_030321279.1
type: Protein
SIO_000068: ncbiprotein

position:329203:-1
position: 329203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350826:-1
position: 350826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350789-350826:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:334333-334532:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:333402-333672:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:332401-332503:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:331767-331887:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:330665-330862:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:330062-330172:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:329203-329495:-1:exon

KCTD20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: KCTD20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD20 isoform X2
translation: MSRHSSLRKRNQLLTARRPSMNVDCAAGTDWSRAPESRCPVENTTLAAHESEESNGVLGSHSPAAVPRTEGLDSECRHTVSPQISSMLSAPEDTHSCHFQDGNKRQAEYFSSQERHGCCTSSSSISSQTAAPEKVTLVVDGTRFAVNPQIFTAHPDTMLGRMFGPGREYNFTRPNEKGEYEIAEGISSAVFRTVLDYYKTGIINCPDGISIPDLRDTCDYLCINFDFNTIKCQDLSALLHELSNDGAHKQFDSYLEELILPIMVDSARKGERECHIVVLTDEDTVDWDEDHPPPMGEEYSQILYSSKLYRFFKYIENRDVAKAVLKERGLKNIRIGIEGYPTCKEKVKRRPGGRSEVIYNYVQRPFIQMSWEKEEGKSRHVDFQCVRSKSLTNLVSVGDDVSEDHEVIMHHPPQVDELDRLNAPFSQMAVNGLPD
SIO_010081: KCTD20
subclass of: SO_0000673
so part of: KCTD20
location: complement(join(329203..329495,330062..330172,330665..330862,331767..331887,332401..332503,333402..333672,334333..334532,342320..342330))
location: region:329203-342330:-1
so has part: feature:342320-342330:-1:exon
so has part: feature:334333-334532:-1:exon
so has part: feature:333402-333672:-1:exon
so has part: feature:332401-332503:-1:exon
so has part: feature:331767-331887:-1:exon
so has part: feature:330665-330862:-1:exon
so has part: feature:330062-330172:-1:exon
so has part: feature:329203-329495:-1:exon

XP_030321280.1
type: Protein
SIO_000068: ncbiprotein

position:342330:-1
position: 342330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342320-342330:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:334333-334532:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:333402-333672:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:332401-332503:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:331767-331887:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:330665-330862:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:330062-330172:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:329203-329495:-1:exon

KCTD20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: KCTD20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD20 isoform X3
translation: MNVDCAAGTDWSRAPESRCPVENTTLAAHESEESNGVLGSHSPAAVPRTEGLDSECRHTVSPQISSMLSAPEDTHSCHFQDGNKRQAEYFSSQERHGCCTSSSSISSQTAAPEKVTLVVDGTRFAVNPQIFTAHPDTMLGRMFGPGREYNFTRPNEKGEYEIAEGISSAVFRTVLDYYKTGIINCPDGISIPDLRDTCDYLCINFDFNTIKCQDLSALLHELSNDGAHKQFDSYLEELILPIMVDSARKGERECHIVVLTDEDTVDWDEDHPPPMGEEYSQILYSSKLYRFFKYIENRDVAKAVLKERGLKNIRIGIEGYPTCKEKVKRRPGGRSEVIYNYVQRPFIQMSWEKEEGKSRHVDFQCVRSKSLTNLVSVGDDVSEDHEVIMHHPPQVDELDRLNAPFSQMAVNGLPD
SIO_010081: KCTD20
subclass of: SO_0000673
so part of: KCTD20
location: complement(join(329203..329495,330062..330172,330665..330862,331767..331887,332401..332503,333402..333672,334333..334483))
location: region:329203-334483:-1
so has part: feature:334333-334483:-1:exon
so has part: feature:333402-333672:-1:exon
so has part: feature:332401-332503:-1:exon
so has part: feature:331767-331887:-1:exon
so has part: feature:330665-330862:-1:exon
so has part: feature:330062-330172:-1:exon
so has part: feature:329203-329495:-1:exon

XP_030321281.1
type: Protein
SIO_000068: ncbiprotein

position:334483:-1
position: 334483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334333-334483:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:333402-333672:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:332401-332503:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:331767-331887:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:330665-330862:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:330062-330172:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:329203-329495:-1:exon

KCTD20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: KCTD20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD20 isoform X3
translation: MNVDCAAGTDWSRAPESRCPVENTTLAAHESEESNGVLGSHSPAAVPRTEGLDSECRHTVSPQISSMLSAPEDTHSCHFQDGNKRQAEYFSSQERHGCCTSSSSISSQTAAPEKVTLVVDGTRFAVNPQIFTAHPDTMLGRMFGPGREYNFTRPNEKGEYEIAEGISSAVFRTVLDYYKTGIINCPDGISIPDLRDTCDYLCINFDFNTIKCQDLSALLHELSNDGAHKQFDSYLEELILPIMVDSARKGERECHIVVLTDEDTVDWDEDHPPPMGEEYSQILYSSKLYRFFKYIENRDVAKAVLKERGLKNIRIGIEGYPTCKEKVKRRPGGRSEVIYNYVQRPFIQMSWEKEEGKSRHVDFQCVRSKSLTNLVSVGDDVSEDHEVIMHHPPQVDELDRLNAPFSQMAVNGLPD
SIO_010081: KCTD20
subclass of: SO_0000673
so part of: KCTD20
location: complement(join(329203..329495,330062..330172,330665..330862,331767..331887,332401..332503,333402..333672,334333..334483))
location: region:329203-334483:-1
so has part: feature:334333-334483:-1:exon
so has part: feature:333402-333672:-1:exon
so has part: feature:332401-332503:-1:exon
so has part: feature:331767-331887:-1:exon
so has part: feature:330665-330862:-1:exon
so has part: feature:330062-330172:-1:exon
so has part: feature:329203-329495:-1:exon

XP_030321282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:334333-334483:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:333402-333672:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:332401-332503:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:331767-331887:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:330665-330862:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:330062-330172:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:329203-329495:-1:exon

KCTD20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: KCTD20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD20 isoform X3
translation: MNVDCAAGTDWSRAPESRCPVENTTLAAHESEESNGVLGSHSPAAVPRTEGLDSECRHTVSPQISSMLSAPEDTHSCHFQDGNKRQAEYFSSQERHGCCTSSSSISSQTAAPEKVTLVVDGTRFAVNPQIFTAHPDTMLGRMFGPGREYNFTRPNEKGEYEIAEGISSAVFRTVLDYYKTGIINCPDGISIPDLRDTCDYLCINFDFNTIKCQDLSALLHELSNDGAHKQFDSYLEELILPIMVDSARKGERECHIVVLTDEDTVDWDEDHPPPMGEEYSQILYSSKLYRFFKYIENRDVAKAVLKERGLKNIRIGIEGYPTCKEKVKRRPGGRSEVIYNYVQRPFIQMSWEKEEGKSRHVDFQCVRSKSLTNLVSVGDDVSEDHEVIMHHPPQVDELDRLNAPFSQMAVNGLPD
SIO_010081: KCTD20
subclass of: SO_0000673
so part of: KCTD20
location: complement(join(329203..329495,330062..330172,330665..330862,331767..331887,332401..332503,333402..333672,334333..334483))
location: region:329203-334483:-1
so has part: feature:334333-334483:-1:exon
so has part: feature:333402-333672:-1:exon
so has part: feature:332401-332503:-1:exon
so has part: feature:331767-331887:-1:exon
so has part: feature:330665-330862:-1:exon
so has part: feature:330062-330172:-1:exon
so has part: feature:329203-329495:-1:exon

XP_030321283.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:334333-334483:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:333402-333672:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:332401-332503:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:331767-331887:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:330665-330862:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:330062-330172:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:329203-329495:-1:exon

LOC103533682
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103533682
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 357740..362788
location: region:357740-362788:1
so has part: feature:357740-362788:1:exon
subclass of: SO_0000010

103533682
type: Gene
SIO_000068: ncbigene

position:357740:1
position: 357740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362788:1
position: 362788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357740-362788:1:exon

LOC103533682
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103533682
product: apoptosis facilitator Bcl-2-like protein 14, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030465570.1
SIO_010081: LOC103533682
subclass of: SO_0000673
so part of: LOC103533682
location: join(357740..357805,359687..360396,361053..361184,361643..361704,361946..362209,362617..362788)
location: region:357740-362788:1
so has part: feature:357740-357805:1:exon
so has part: feature:359687-360396:1:exon
so has part: feature:361053-361184:1:exon
so has part: feature:361643-361704:1:exon
so has part: feature:361946-362209:1:exon
so has part: feature:362617-362788:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:357740-357805:1:exon

position:357805:1
position: 357805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:359687-360396:1:exon

position:359687:1
position: 359687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360396:1
position: 360396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:361053-361184:1:exon

position:361053:1
position: 361053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361184:1
position: 361184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:361643-361704:1:exon

position:361643:1
position: 361643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361704:1
position: 361704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:361946-362209:1:exon

position:361946:1
position: 361946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362209:1
position: 362209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:362617-362788:1:exon

position:362617:1
position: 362617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC103533682
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103533682
product: apoptosis facilitator Bcl-2-like protein 14, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030465571.1
SIO_010081: LOC103533682
subclass of: SO_0000673
so part of: LOC103533682
location: join(357740..357805,359687..360396,361056..361184,361643..361704,361946..362209,362617..362788)
location: region:357740-362788:1
so has part: feature:357740-357805:1:exon
so has part: feature:359687-360396:1:exon
so has part: feature:361056-361184:1:exon
so has part: feature:361643-361704:1:exon
so has part: feature:361946-362209:1:exon
so has part: feature:362617-362788:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:357740-357805:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:359687-360396:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:361056-361184:1:exon

position:361056:1
position: 361056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:361643-361704:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:361946-362209:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:362617-362788:1:exon

LOC103533682
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103533682
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apoptosis facilitator Bcl-2-like protein 14 isoform X1
translation: MESNVRALPSGTSRWDAGMQTSSKILSLDRQGAKKVLEIYVKRSLSCCESSLGARRKHQEGARRSGGKAEGPQRSKSDFYKYSCARSSRRKDREEEPKALDPDEGLDDESKAPRKVPKEKRKPKRKSSKNDSQRSWFKSFLNFLFKKSPEEQKENPGQKAKGKDAKGPQSSEPDGNKKPGVDSNTCPALSRTPKRRPSLKKVFSFKKNAEEEGGDPTAGTRAKRPNCLPLHHGLVPSHPADEEQPYSYYTQVSEEIELMVQGREHQGSRGFGEQSQPPSPNGVDEAIRRIVALLQSAGDELDRQVKEDAQLWKFFRDMSYSSFKDLADAYVQREVTASRTNADPQEIQFAYAVHFTALVAGICNQTLNRIMGFGTCYLEESFAPLSYSKILQNREVFSTDNSESPD
SIO_010081: LOC103533682
subclass of: SO_0000673
so part of: LOC103533682
location: join(357798..357805,359687..360396,361053..361184,361643..361704,361946..362209,362617..362661)
location: region:357798-362661:1
so has part: feature:357798-357805:1:exon
so has part: feature:359687-360396:1:exon
so has part: feature:361053-361184:1:exon
so has part: feature:361643-361704:1:exon
so has part: feature:361946-362209:1:exon
so has part: feature:362617-362661:1:exon

XP_030321430.1
type: Protein
SIO_000068: ncbiprotein

position:357798:1
position: 357798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362661:1
position: 362661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357798-357805:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:359687-360396:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:361053-361184:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:361643-361704:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:361946-362209:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:362617-362661:1:exon

LOC103533682
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103533682
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apoptosis facilitator Bcl-2-like protein 14 isoform X2
translation: MESNVRALPSGTSRWDAGMQTSSKILSLDRQGAKKVLEIYVKRSLSCCESSLGARRKHQEGARRSGGKAEGPQRSKSDFYKYSCARSSRRKDREEEPKALDPDEGLDDESKAPRKVPKEKRKPKRKSSKNDSQRSWFKSFLNFLFKKSPEEQKENPGQKAKGKDAKGPQSSEPDGNKKPGVDSNTCPALSRTPKRRPSLKKVFSFKKNAEEEGGDPTAGTRAKRPNCLPLHHGLVPSHPDEEQPYSYYTQVSEEIELMVQGREHQGSRGFGEQSQPPSPNGVDEAIRRIVALLQSAGDELDRQVKEDAQLWKFFRDMSYSSFKDLADAYVQREVTASRTNADPQEIQFAYAVHFTALVAGICNQTLNRIMGFGTCYLEESFAPLSYSKILQNREVFSTDNSESPD
SIO_010081: LOC103533682
subclass of: SO_0000673
so part of: LOC103533682
location: join(357798..357805,359687..360396,361056..361184,361643..361704,361946..362209,362617..362661)
location: region:357798-362661:1
so has part: feature:357798-357805:1:exon
so has part: feature:359687-360396:1:exon
so has part: feature:361056-361184:1:exon
so has part: feature:361643-361704:1:exon
so has part: feature:361946-362209:1:exon
so has part: feature:362617-362661:1:exon

XP_030321431.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357798-357805:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:359687-360396:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:361056-361184:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:361643-361704:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:361946-362209:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:362617-362661:1:exon

PNPLA1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PNPLA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 367024..376898
location: region:367024-376898:1
so has part: feature:367024-376898:1:exon
subclass of: SO_0000010

103533683
type: Gene
SIO_000068: ncbigene

position:367024:1
position: 367024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376898:1
position: 376898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367024-376898:1:exon

PNPLA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PNPLA1
product: patatin like phospholipase domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_008499574.2
SIO_010081: PNPLA1
subclass of: SO_0000673
so part of: PNPLA1
location: join(367024..367495,371447..371679,372325..372390,374081..374293,374575..374635,374715..374855,375300..375399,376680..376898)
location: region:367024-376898:1
so has part: feature:367024-367495:1:exon
so has part: feature:371447-371679:1:exon
so has part: feature:372325-372390:1:exon
so has part: feature:374081-374293:1:exon
so has part: feature:374575-374635:1:exon
so has part: feature:374715-374855:1:exon
so has part: feature:375300-375399:1:exon
so has part: feature:376680-376898:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:367024-367495:1:exon

position:367495:1
position: 367495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:371447-371679:1:exon

position:371447:1
position: 371447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371679:1
position: 371679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:372325-372390:1:exon

position:372325:1
position: 372325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372390:1
position: 372390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:374081-374293:1:exon

position:374081:1
position: 374081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374293:1
position: 374293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:374575-374635:1:exon

position:374575:1
position: 374575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374635:1
position: 374635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:374715-374855:1:exon

position:374715:1
position: 374715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374855:1
position: 374855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:375300-375399:1:exon

position:375300:1
position: 375300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375399:1
position: 375399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:376680-376898:1:exon

position:376680:1
position: 376680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PNPLA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PNPLA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: patatin-like phospholipase domain-containing protein 1
translation: MAEEDPRGSSTRFSLSFSGSGFLALYQVGVVQSLLELAPELLKSACKVYGSSAGSLIAAAVVCGINIDDLKEFFFAIATDVKKTILGPLSPKCSLLASIRTVLQRMLPEDSYQLASGRLHISLTRVVDGQNVMASEFSSKEELIQALLCSCFLPIYCGFIPPSYRGVRYVDGGFTGLQPVSSLEEAVITVSPFTGELDICPRDCPAIFFCFQIFNGSIQISIENLCRISYALFPPSTMVLNDILSQGYQDTALFLYRNNAFGFNYFDGNFRFASMCGKNDSSPGKRTFTGLYKKVPQCLAPCFLPGLALWRKEQLAGLQDPLSRFLLQPYRLPAFLRKGLKKLWGLLEDISSLAKQFQKGLQTMVPALLKRAMARR
SIO_010081: PNPLA1
subclass of: SO_0000673
so part of: PNPLA1
location: join(367294..367495,371447..371679,372325..372390,374081..374293,374575..374635,374715..374855,375300..375399,376680..376794)
location: region:367294-376794:1
so has part: feature:367294-367495:1:exon
so has part: feature:371447-371679:1:exon
so has part: feature:372325-372390:1:exon
so has part: feature:374081-374293:1:exon
so has part: feature:374575-374635:1:exon
so has part: feature:374715-374855:1:exon
so has part: feature:375300-375399:1:exon
so has part: feature:376680-376794:1:exon

XP_008497796.1
type: Protein
SIO_000068: ncbiprotein

position:367294:1
position: 367294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376794:1
position: 376794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367294-367495:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:371447-371679:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:372325-372390:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:374081-374293:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:374575-374635:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:374715-374855:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:375300-375399:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:376680-376794:1:exon

LOC103533684
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103533684
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(379704..381932)
location: region:379704-381932:-1
so has part: feature:379704-381932:-1:exon
subclass of: SO_0000010

103533684
type: Gene
SIO_000068: ncbigene

position:379704:-1
position: 379704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381932:-1
position: 381932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379704-381932:-1:exon

LOC103533684
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103533684
product: patatin-like phospholipase domain-containing protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_030465313.1
SIO_010081: LOC103533684
subclass of: SO_0000673
so part of: LOC103533684
location: complement(join(379704..379946,380415..380480,380859..381079,381803..381932))
location: region:379704-381932:-1
so has part: feature:381803-381932:-1:exon
so has part: feature:380859-381079:-1:exon
so has part: feature:380415-380480:-1:exon
so has part: feature:379704-379946:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:381803-381932:-1:exon

position:381803:-1
position: 381803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:380859-381079:-1:exon

position:380859:-1
position: 380859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381079:-1
position: 381079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:380415-380480:-1:exon

position:380415:-1
position: 380415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380480:-1
position: 380480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:379704-379946:-1:exon

position:379946:-1
position: 379946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103533684
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103533684
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: patatin-like phospholipase domain-containing protein 1
translation: MYEAGVFAALKELTPAILQSASKVYGASSGSIIATLTLCGCDADELKQYFFSKVTTSFWGFVPGGRMLKLLKNILNKKLPPNAHELVSGKLHIILTRLWDWRCTVVSEFSSKEDLIQAVICSCFIPLYFGLMPPLYRGVRYVDGELAMWQADFVSQNTITISAFAGEYDICPKEGPAAFLNFQISDCILLISKRNLSRIMCLLQFPPSQVSCSSRYPEP
SIO_010081: LOC103533684
subclass of: SO_0000673
so part of: LOC103533684
location: complement(join(379704..379946,380415..380480,380859..381079,381803..381932))
location: region:379704-381932:-1
so has part: feature:381803-381932:-1:exon
so has part: feature:380859-381079:-1:exon
so has part: feature:380415-380480:-1:exon
so has part: feature:379704-379946:-1:exon

XP_030321173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:381803-381932:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:380859-381079:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:380415-380480:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:379704-379946:-1:exon

LOC103533587
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103533587
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 416867..418627
location: region:416867-418627:1
so has part: feature:416867-418627:1:exon
subclass of: SO_0000010

103533587
type: Gene
SIO_000068: ncbigene

position:416867:1
position: 416867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418627:1
position: 418627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416867-418627:1:exon

LOC103533587
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103533587
product: potassium voltage-gated channel subfamily A member 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008499471.2
SIO_010081: LOC103533587
subclass of: SO_0000673
so part of: LOC103533587
location: 416867..418627
location: region:416867-418627:1
so has part: feature:416867-418627:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:416867-418627:1:exon

LOC103533587
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103533587
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: potassium voltage-gated channel subfamily A member 3
translation: MDERRSLLYSPASSSAGRHPRGGGSTSSHHNLGYTEQLPPATPQPGPEQEEEEGDEGEEGSMTVVGGGGGGDPLLEEPQHPQPLLGGERYDQPPTPAAVPAGQPTGAGEHECCERVVINISGLRFETQLKTLAQFPETLLGDPRKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRIRRPVNVPIDIFSEEIRFYQLGEEAMEKFREDEGFIREEQRPLPDKEFQRQVWLLFEYPESSGPARGIAIVSVLVILISIVIFCLETLPEFRDDHDYEQTGGTFGMGGGPVPPDVFTNSSSSATSMVSSFTDPFFVVETLCIIWFSFELLVRFFACPSKATFSKNIMNIIDIVAIIPYFITLGTELAERQGNGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEADDPSSGFSSIPDAFWWAVVTMTTVGYGDMAPVTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETEGEEQAQYMHVGSCQHLSSSEEMRKARSNSTLSKSEYMVIEEGGINHSAFKQAAFKTGNCTTTNNPXCVNIKKIFTDV
SIO_010081: LOC103533587
subclass of: SO_0000673
so part of: LOC103533587
location: 416867..418627
location: region:416867-418627:1
so has part: feature:416867-418627:1:exon

XP_008497693.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416867-418627:1:exon

KCNA2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: KCNA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 446346..449303
location: region:446346-449303:1
so has part: feature:446346-449303:1:exon
subclass of: SO_0000010

103533588
type: Gene
SIO_000068: ncbigene

position:446346:1
position: 446346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449303:1
position: 449303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446346-449303:1:exon

KCNA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: KCNA2
product: potassium voltage-gated channel subfamily A member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_008499473.2
SIO_010081: KCNA2
subclass of: SO_0000673
so part of: KCNA2
location: join(446346..446444,447549..449301)
location: region:446346-449301:1
so has part: feature:446346-446444:1:exon
so has part: feature:447549-449301:1:exon

position:449301:1
position: 449301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446346-446444:1:exon

position:446444:1
position: 446444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:447549-449301:1:exon

position:447549:1
position: 447549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCNA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: KCNA2
product: potassium voltage-gated channel subfamily A member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 53 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_008499472.2
SIO_010081: KCNA2
subclass of: SO_0000673
so part of: KCNA2
location: join(446378..446444,447455..449303)
location: region:446378-449303:1
so has part: feature:446378-446444:1:exon
so has part: feature:447455-449303:1:exon

position:446378:1
position: 446378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446378-446444:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:447455-449303:1:exon

position:447455:1
position: 447455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCNA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: KCNA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium voltage-gated channel subfamily A member 2 isoform X1
translation: MTVATGDPTDEAAALPGHPQDTYNPETDHECCERVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEEIRFYELGEEAMEMFREDEGYIKEEERPLPENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVSFCLETLPIFRDENEDMHGSGLSHLPYSNSSVGYQQSTSFTDPFFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYFITLGTELAEKPEDGQQGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEADESESQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETEGEEQAQYLQVTSCPKIPSSPDLKKSRSASTISKSDYMEIQEGVNNSNEDFREENLKTANCTLANTNYVNITKMLTDV
SIO_010081: KCNA2
subclass of: SO_0000673
so part of: KCNA2
location: 447542..449041
location: region:447542-449041:1
so has part: feature:447542-449041:1:exon

XP_008497694.1
type: Protein
SIO_000068: ncbiprotein

position:447542:1
position: 447542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449041:1
position: 449041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447542-449041:1:exon

KCNA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: KCNA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium voltage-gated channel subfamily A member 2 isoform X2
translation: MRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEEIRFYELGEEAMEMFREDEGYIKEEERPLPENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVSFCLETLPIFRDENEDMHGSGLSHLPYSNSSVGYQQSTSFTDPFFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYFITLGTELAEKPEDGQQGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEADESESQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETEGEEQAQYLQVTSCPKIPSSPDLKKSRSASTISKSDYMEIQEGVNNSNEDFREENLKTANCTLANTNYVNITKMLTDV
SIO_010081: KCNA2
subclass of: SO_0000673
so part of: KCNA2
location: 447737..449041
location: region:447737-449041:1
so has part: feature:447737-449041:1:exon

XP_008497695.1
type: Protein
SIO_000068: ncbiprotein

position:447737:1
position: 447737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447737-449041:1:exon

KCNA10
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: KCNA10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 484024..485647
location: region:484024-485647:1
so has part: feature:484024-485647:1:exon
subclass of: SO_0000010

103533589
type: Gene
SIO_000068: ncbigene

position:484024:1
position: 484024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485647:1
position: 485647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484024-485647:1:exon

KCNA10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: KCNA10
product: potassium voltage-gated channel subfamily A member 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 54 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008499474.2
SIO_010081: KCNA10
subclass of: SO_0000673
so part of: KCNA10
location: 484024..485647
location: region:484024-485647:1
so has part: feature:484024-485647:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:484024-485647:1:exon

KCNA10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: KCNA10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium voltage-gated channel subfamily A member 10
translation: MMDVATWKEMEVALVSFDNADQIVEDPCYSNDLSPAGQSRKSHPSCANLLSNLRILINSENANNETIFSRFSAEFSEHLVGERVGMEEGDQRVIINIAGLRFETRLKTLNQFPETLLGDPEKRMRYFDSMRNEYFFDRNRPSFDGILYYYQSGGKIRRPANVPIDVFADEITFYELGDEAMDQFREDEGFIKDPETLLPTNDFHRQFWLLFEYPESSSAARGVALVSVLVIVISIIIFCMETLPEFREEREFKSTQELSKNLTDTFLAHSTFTDPFFVIETACIIWFSFELFVRFIVCPSKTEFFRNIMNIIDIVSIIPYFVTLTTELIQQSELNGQQNMSLAILRIIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEVDEPQSHFSSIPDGFWWAVVTMTTVGYGDMCPTTLGGKIVGTLCAIAGVLTIALPVPVIVSNFNYFYHRETENEEKQILPGEVERILTSVVTGNGSMESLNKTNGGYPRDKAKK
SIO_010081: KCNA10
subclass of: SO_0000673
so part of: KCNA10
location: 484097..485647
location: region:484097-485647:1
so has part: feature:484097-485647:1:exon

XP_008497696.2
type: Protein
SIO_000068: ncbiprotein

position:484097:1
position: 484097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484097-485647:1:exon

NFASC
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: NFASC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 522581..575817
location: region:522581-575817:1
so has part: feature:522581-575817:1:exon
subclass of: SO_0000010

103533590
type: Gene
SIO_000068: ncbigene

position:522581:1
position: 522581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575817:1
position: 575817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522581-575817:1:exon

NFASC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NFASC
product: neurofascin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008499475.2
SIO_010081: NFASC
subclass of: SO_0000673
so part of: NFASC
location: join(522581..522674,525225..525242,525506..525611,526263..526459,527568..527690,528562..528732,531274..531324,536089..536200,537007..537191,537698..537829,538343..538486,538869..538980,539082..539248,539822..539969,540545..540669,541502..541537,542362..542463,542883..543080,544076..544146,544711..544933,546545..546660,547922..548126,550672..550794,551391..551564,553543..553557,560002..560268,568940..569071,569702..569771,573144..573155,575570..575817)
location: region:522581-575817:1
so has part: feature:522581-522674:1:exon
so has part: feature:525225-525242:1:exon
so has part: feature:525506-525611:1:exon
so has part: feature:526263-526459:1:exon
so has part: feature:527568-527690:1:exon
so has part: feature:528562-528732:1:exon
so has part: feature:531274-531324:1:exon
so has part: feature:536089-536200:1:exon
so has part: feature:537007-537191:1:exon
so has part: feature:537698-537829:1:exon
so has part: feature:538343-538486:1:exon
so has part: feature:538869-538980:1:exon
so has part: feature:539082-539248:1:exon
so has part: feature:539822-539969:1:exon
so has part: feature:540545-540669:1:exon
so has part: feature:541502-541537:1:exon
so has part: feature:542362-542463:1:exon
so has part: feature:542883-543080:1:exon
so has part: feature:544076-544146:1:exon
so has part: feature:544711-544933:1:exon
so has part: feature:546545-546660:1:exon
so has part: feature:547922-548126:1:exon
so has part: feature:550672-550794:1:exon
so has part: feature:551391-551564:1:exon
so has part: feature:553543-553557:1:exon
so has part: feature:560002-560268:1:exon
so has part: feature:568940-569071:1:exon
so has part: feature:569702-569771:1:exon
so has part: feature:573144-573155:1:exon
so has part: feature:575570-575817:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:522581-522674:1:exon

position:522674:1
position: 522674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:525225-525242:1:exon

position:525225:1
position: 525225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525242:1
position: 525242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:525506-525611:1:exon

position:525506:1
position: 525506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525611:1
position: 525611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:526263-526459:1:exon

position:526263:1
position: 526263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526459:1
position: 526459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:527568-527690:1:exon

position:527568:1
position: 527568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527690:1
position: 527690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:528562-528732:1:exon

position:528562:1
position: 528562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528732:1
position: 528732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:531274-531324:1:exon

position:531274:1
position: 531274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531324:1
position: 531324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:536089-536200:1:exon

position:536089:1
position: 536089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536200:1
position: 536200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:537007-537191:1:exon

position:537007:1
position: 537007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537191:1
position: 537191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:537698-537829:1:exon

position:537698:1
position: 537698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537829:1
position: 537829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:538343-538486:1:exon

position:538343:1
position: 538343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538486:1
position: 538486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:538869-538980:1:exon

position:538869:1
position: 538869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538980:1
position: 538980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:539082-539248:1:exon

position:539082:1
position: 539082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539248:1
position: 539248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:539822-539969:1:exon

position:539822:1
position: 539822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539969:1
position: 539969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:540545-540669:1:exon

position:540545:1
position: 540545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540669:1
position: 540669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:541502-541537:1:exon

position:541502:1
position: 541502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541537:1
position: 541537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:542362-542463:1:exon

position:542362:1
position: 542362
reference: sequence
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position:542463:1
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reference: sequence
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urn:…
SIO_000300: 18
SIO_000628: feature:542883-543080:1:exon

position:542883:1
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reference: sequence
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position:543080:1
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urn:…
SIO_000300: 19
SIO_000628: feature:544076-544146:1:exon

position:544076:1
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reference: sequence
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position:544146:1
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urn:…
SIO_000300: 20
SIO_000628: feature:544711-544933:1:exon

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position:544933:1
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urn:…
SIO_000300: 21
SIO_000628: feature:546545-546660:1:exon

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reference: sequence
type: ForwardStrandPosition
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position:546660:1
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urn:…
SIO_000300: 22
SIO_000628: feature:547922-548126:1:exon

position:547922:1
position: 547922
reference: sequence
type: ForwardStrandPosition
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position:548126:1
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reference: sequence
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urn:…
SIO_000300: 23
SIO_000628: feature:550672-550794:1:exon

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reference: sequence
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position:550794:1
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urn:…
SIO_000300: 24
SIO_000628: feature:551391-551564:1:exon

position:551391:1
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reference: sequence
type: ForwardStrandPosition
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position:551564:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 25
SIO_000628: feature:553543-553557:1:exon

position:553543:1
position: 553543
reference: sequence
type: ForwardStrandPosition
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position:553557:1
position: 553557
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 26
SIO_000628: feature:560002-560268:1:exon

position:560002:1
position: 560002
reference: sequence
type: ForwardStrandPosition
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position:560268:1
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reference: sequence
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urn:…
SIO_000300: 27
SIO_000628: feature:568940-569071:1:exon

position:568940:1
position: 568940
reference: sequence
type: ForwardStrandPosition
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position:569071:1
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reference: sequence
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urn:…
SIO_000300: 28
SIO_000628: feature:569702-569771:1:exon

position:569702:1
position: 569702
reference: sequence
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position:569771:1
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reference: sequence
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urn:…
SIO_000300: 29
SIO_000628: feature:573144-573155:1:exon

position:573144:1
position: 573144
reference: sequence
type: ForwardStrandPosition
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position:573155:1
position: 573155
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 30
SIO_000628: feature:575570-575817:1:exon

position:575570:1
position: 575570
reference: sequence
type: ForwardStrandPosition
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NFASC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NFASC
product: neurofascin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 59% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008499476.2
SIO_010081: NFASC
subclass of: SO_0000673
so part of: NFASC
location: join(522581..522674,525225..525242,525506..525611,526263..526459,527568..527690,528562..528732,536089..536200,537007..537191,537698..537829,538343..538486,538869..538980,539082..539248,539822..539969,540545..540669,541502..541537,542362..542463,542883..543080,544076..544146,544711..544933,550672..550794,551391..551564,553543..553557,560002..560268,562350..562466,564214..564369,568940..569071,569702..569771,575570..575817)
location: region:522581-575817:1
so has part: feature:522581-522674:1:exon
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 12
SIO_000628: feature:539082-539248:1:exon

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SIO_000300: 13
SIO_000628: feature:539822-539969:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:540545-540669:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:541502-541537:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:542362-542463:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:542883-543080:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:544076-544146:1:exon

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SIO_000300: 19
SIO_000628: feature:544711-544933:1:exon

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SIO_000300: 20
SIO_000628: feature:550672-550794:1:exon

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SIO_000300: 21
SIO_000628: feature:551391-551564:1:exon

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SIO_000300: 22
SIO_000628: feature:553543-553557:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:560002-560268:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:562350-562466:1:exon

position:562350:1
position: 562350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562466:1
position: 562466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:564214-564369:1:exon

position:564214:1
position: 564214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564369:1
position: 564369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:568940-569071:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:569702-569771:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:575570-575817:1:exon

NFASC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NFASC
product: neurofascin, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008499479.2
SIO_010081: NFASC
subclass of: SO_0000673
so part of: NFASC
location: join(522581..522674,525225..525242,525506..525611,526263..526459,527568..527690,528562..528732,536089..536200,537007..537191,537698..537829,538343..538486,538869..538980,539082..539248,539822..539969,540545..540669,541502..541537,542362..542463,542883..543080,544076..544146,544711..544933,550672..550794,551391..551564,553543..553557,560002..560268,568940..569071,569702..569771,575570..575817)
location: region:522581-575817:1
so has part: feature:522581-522674:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:522581-522674:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:525225-525242:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:525506-525611:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:526263-526459:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:527568-527690:1:exon

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SIO_000300: 6
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SIO_000300: 7
SIO_000628: feature:536089-536200:1:exon

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SIO_000300: 8
SIO_000628: feature:537007-537191:1:exon

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SIO_000300: 9
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urn:…
SIO_000300: 11
SIO_000628: feature:538869-538980:1:exon

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SIO_000300: 13
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SIO_000300: 20
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SIO_000300: 21
SIO_000628: feature:551391-551564:1:exon

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SIO_000300: 22
SIO_000628: feature:553543-553557:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:560002-560268:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:568940-569071:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:569702-569771:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:575570-575817:1:exon

NFASC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NFASC
product: neurofascin, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 68% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008499480.2
SIO_010081: NFASC
subclass of: SO_0000673
so part of: NFASC
location: join(522581..522674,525225..525242,525506..525611,526263..526459,527568..527690,528562..528732,536089..536200,537007..537191,537698..537829,538343..538486,538869..538980,539082..539248,539822..539969,540545..540669,541502..541537,542362..542463,542883..543080,544076..544146,544711..544933,550672..550794,551391..551564,553543..553557,568940..569071,569702..569771,575570..575817)
location: region:522581-575817:1
so has part: feature:522581-522674:1:exon
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so has part: feature:525506-525611:1:exon
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urn:…
SIO_000300: 1
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urn:…
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SIO_000300: 20
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urn:…
SIO_000300: 21
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urn:…
SIO_000300: 22
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SIO_000300: 23
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urn:…
SIO_000300: 24
SIO_000628: feature:569702-569771:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:575570-575817:1:exon

NFASC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NFASC
product: neurofascin, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008499481.2
SIO_010081: NFASC
subclass of: SO_0000673
so part of: NFASC
location: join(522581..522674,525225..525242,525506..525611,526263..526459,527568..527690,528562..528732,536089..536200,537007..537191,537698..537829,538343..538486,538869..538980,539082..539248,539822..539969,540545..540669,541502..541537,542362..542463,542883..543080,544076..544146,544711..544933,550672..550794,551391..551564,568940..569071,569702..569771,575570..575817)
location: region:522581-575817:1
so has part: feature:522581-522674:1:exon
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urn:…
SIO_000300: 1
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 14
SIO_000628: feature:540545-540669:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:541502-541537:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:542362-542463:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:542883-543080:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:544076-544146:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:544711-544933:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:550672-550794:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:551391-551564:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:568940-569071:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:569702-569771:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:575570-575817:1:exon

NFASC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NFASC
product: neurofascin, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 60% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008499477.2
SIO_010081: NFASC
subclass of: SO_0000673
so part of: NFASC
location: join(522581..522674,525506..525611,526263..526459,527568..527690,528562..528732,531274..531324,536089..536200,537007..537191,537698..537829,538343..538486,538869..538980,539082..539248,539822..539969,540545..540669,542362..542463,542883..543080,544076..544146,544711..544933,546545..546660,547922..548126,550672..550794,551391..551564,553543..553557,568940..569071,569702..569771,573144..573155,575570..575817)
location: region:522581-575817:1
so has part: feature:522581-522674:1:exon
so has part: feature:525506-525611:1:exon
so has part: feature:526263-526459:1:exon
so has part: feature:527568-527690:1:exon
so has part: feature:528562-528732:1:exon
so has part: feature:531274-531324:1:exon
so has part: feature:536089-536200:1:exon
so has part: feature:537007-537191:1:exon
so has part: feature:537698-537829:1:exon
so has part: feature:538343-538486:1:exon
so has part: feature:538869-538980:1:exon
so has part: feature:539082-539248:1:exon
so has part: feature:539822-539969:1:exon
so has part: feature:540545-540669:1:exon
so has part: feature:542362-542463:1:exon
so has part: feature:542883-543080:1:exon
so has part: feature:544076-544146:1:exon
so has part: feature:544711-544933:1:exon
so has part: feature:546545-546660:1:exon
so has part: feature:547922-548126:1:exon
so has part: feature:550672-550794:1:exon
so has part: feature:551391-551564:1:exon
so has part: feature:553543-553557:1:exon
so has part: feature:568940-569071:1:exon
so has part: feature:569702-569771:1:exon
so has part: feature:573144-573155:1:exon
so has part: feature:575570-575817:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:522581-522674:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:525506-525611:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526263-526459:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:527568-527690:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:528562-528732:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:531274-531324:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:536089-536200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:537007-537191:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:537698-537829:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:538343-538486:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:538869-538980:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:539082-539248:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:539822-539969:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:540545-540669:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:542362-542463:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:542883-543080:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:544076-544146:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:544711-544933:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:546545-546660:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:547922-548126:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:550672-550794:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:551391-551564:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:553543-553557:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:568940-569071:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:569702-569771:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:573144-573155:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:575570-575817:1:exon

NFASC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NFASC
product: neurofascin, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008499478.2
SIO_010081: NFASC
subclass of: SO_0000673
so part of: NFASC
location: join(522581..522674,525506..525611,526263..526459,527568..527690,528562..528732,531274..531324,536089..536200,537007..537191,537698..537829,538343..538486,538869..538980,539082..539248,539822..539969,540545..540669,542362..542463,542883..543080,544076..544146,544711..544933,546545..546660,547922..548126,550672..550794,551391..551564,568940..569071,569702..569771,575570..575817)
location: region:522581-575817:1
so has part: feature:522581-522674:1:exon
so has part: feature:525506-525611:1:exon
so has part: feature:526263-526459:1:exon
so has part: feature:527568-527690:1:exon
so has part: feature:528562-528732:1:exon
so has part: feature:531274-531324:1:exon
so has part: feature:536089-536200:1:exon
so has part: feature:537007-537191:1:exon
so has part: feature:537698-537829:1:exon
so has part: feature:538343-538486:1:exon
so has part: feature:538869-538980:1:exon
so has part: feature:539082-539248:1:exon
so has part: feature:539822-539969:1:exon
so has part: feature:540545-540669:1:exon
so has part: feature:542362-542463:1:exon
so has part: feature:542883-543080:1:exon
so has part: feature:544076-544146:1:exon
so has part: feature:544711-544933:1:exon
so has part: feature:546545-546660:1:exon
so has part: feature:547922-548126:1:exon
so has part: feature:550672-550794:1:exon
so has part: feature:551391-551564:1:exon
so has part: feature:568940-569071:1:exon
so has part: feature:569702-569771:1:exon
so has part: feature:575570-575817:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:522581-522674:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:525506-525611:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526263-526459:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:527568-527690:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:528562-528732:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:531274-531324:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:536089-536200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:537007-537191:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:537698-537829:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:538343-538486:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:538869-538980:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:539082-539248:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:539822-539969:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:540545-540669:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:542362-542463:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:542883-543080:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:544076-544146:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:544711-544933:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:546545-546660:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:547922-548126:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:550672-550794:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:551391-551564:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:568940-569071:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:569702-569771:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:575570-575817:1:exon

NFASC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NFASC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurofascin isoform X1
translation: MVLGRDLIPWAGIVLALCLQHLGSTIEVPLDSNIQSELPQPPTITKQSVKDYIVDPRDNIFIECEAKGNPVPIFSWTRNGKFFNVAKDPKVSMRRRSGTLVIDFHSGGRPEDYEGEYQCFARNDYGTALSSKIHLQVSKSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPSPVIFWMSSSMEPIQQDKRVSQGQNGDLYFSNVLLQDAQTDYSCNARFHFTHTIQQKNPYTLKVKTKKPHNETSLGYHTAMYSARGITETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPQNLILAPGEDGRLVCRANGNPKPAIQWLVNGEPIEASPPNPSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRILAPRNQLIKVIQNNRTRLDCPFFGSPIPTLRWFKNGQGNTLDGGNYKAHENGSLEMAMARKEDQGIYTCVATNILGKAEAQVRLEVKDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKVTVTWLKDEAPLYLGNRMKKEDDGLTIYGVAEKDQGDYTCVASTELDKDSAKAFLTVLAVPANRLRDLPKERPDRPRDLELSDLAERSVRLTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHSRYPGSVNSAILSLSPYVNYQFRVIAVNDVGSSLPSLPSERYQTNGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKVPRHVVWNTPIYVPYEIKVQAENDFGRAPEPDTYIGYSGEDYPKAAPTDVGIRIINSTAIALTWTRVHLDTIQGQLKEYRAYFWRDSSLLKNLWVSKKRQFVSFPGDRNRGIVSRLFPYSNYKLEMVVTNGRGDGPRSEVKEFPTPEGVPSSPRYLRIRQPNLESINLEWDQPEHPNGVLTGYSLRYQAFNGSKTGRTLVENFSPNQTKFTLQRTDPISRYRFFLRARTQVGEGETLVEESPALLNEATPSPAATELPPTTIDLTSTTTAPTTTTTTTDTTTTTTTTTTTTTDTTTTTTTDTTPPPPTTTTTTITTTAATTVASTTAAPERAPAATTKQELAYTKNHVDIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPVRDNKDEHLNPEDKNVEDGSFDYRSLESDEDNKPLPNSQTSLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
SIO_010081: NFASC
subclass of: SO_0000673
so part of: NFASC
location: join(522581..522674,525225..525242,525506..525611,526263..526459,527568..527690,528562..528732,531274..531324,536089..536200,537007..537191,537698..537829,538343..538486,538869..538980,539082..539248,539822..539969,540545..540669,541502..541537,542362..542463,542883..543080,544076..544146,544711..544933,546545..546660,547922..548126,550672..550794,551391..551564,553543..553557,560002..560268,568940..569071,569702..569771,573144..573155,575570..575801)
location: region:522581-575801:1
so has part: feature:522581-522674:1:exon
so has part: feature:525225-525242:1:exon
so has part: feature:525506-525611:1:exon
so has part: feature:526263-526459:1:exon
so has part: feature:527568-527690:1:exon
so has part: feature:528562-528732:1:exon
so has part: feature:531274-531324:1:exon
so has part: feature:536089-536200:1:exon
so has part: feature:537007-537191:1:exon
so has part: feature:537698-537829:1:exon
so has part: feature:538343-538486:1:exon
so has part: feature:538869-538980:1:exon
so has part: feature:539082-539248:1:exon
so has part: feature:539822-539969:1:exon
so has part: feature:540545-540669:1:exon
so has part: feature:541502-541537:1:exon
so has part: feature:542362-542463:1:exon
so has part: feature:542883-543080:1:exon
so has part: feature:544076-544146:1:exon
so has part: feature:544711-544933:1:exon
so has part: feature:546545-546660:1:exon
so has part: feature:547922-548126:1:exon
so has part: feature:550672-550794:1:exon
so has part: feature:551391-551564:1:exon
so has part: feature:553543-553557:1:exon
so has part: feature:560002-560268:1:exon
so has part: feature:568940-569071:1:exon
so has part: feature:569702-569771:1:exon
so has part: feature:573144-573155:1:exon
so has part: feature:575570-575801:1:exon

XP_008497697.1
type: Protein
SIO_000068: ncbiprotein

position:575801:1
position: 575801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522581-522674:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:525225-525242:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:525506-525611:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:526263-526459:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:527568-527690:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:528562-528732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:531274-531324:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:536089-536200:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:537007-537191:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:537698-537829:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:538343-538486:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:538869-538980:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:539082-539248:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:539822-539969:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:540545-540669:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:541502-541537:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:542362-542463:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:542883-543080:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:544076-544146:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:544711-544933:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:546545-546660:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:547922-548126:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:550672-550794:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:551391-551564:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:553543-553557:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:560002-560268:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:568940-569071:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:569702-569771:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:573144-573155:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:575570-575801:1:exon

NFASC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NFASC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurofascin isoform X2
translation: MVLGRDLIPWAGIVLALCLQHLGSTIEVPLDSNIQSELPQPPTITKQSVKDYIVDPRDNIFIECEAKGNPVPIFSWTRNGKFFNVAKDPKVSMRRRSGTLVIDFHSGGRPEDYEGEYQCFARNDYGTALSSKIHLQVSKSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPSPVIFWMSSSMEPIQQDKRVSQGQNGDLYFSNVLLQDAQTDYSCNARFHFTHTIQQKNPYTLKVKTTRGITETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPQNLILAPGEDGRLVCRANGNPKPAIQWLVNGEPIEASPPNPSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRILAPRNQLIKVIQNNRTRLDCPFFGSPIPTLRWFKNGQGNTLDGGNYKAHENGSLEMAMARKEDQGIYTCVATNILGKAEAQVRLEVKDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKVTVTWLKDEAPLYLGNRMKKEDDGLTIYGVAEKDQGDYTCVASTELDKDSAKAFLTVLAVPANRLRDLPKERPDRPRDLELSDLAERSVRLTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHSRYPGSVNSAILSLSPYVNYQFRVIAVNDVGSSLPSLPSERYQTNGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKVPRHVVWNTPIYVPYEIKVQAENDFGRAPEPDTYIGYSGEDLPSSPRYLRIRQPNLESINLEWDQPEHPNGVLTGYSLRYQAFNGSKTGRTLVENFSPNQTKFTLQRTDPISRYRFFLRARTQVGEGETLVEESPALLNEATPSPAATELPPTTIDLTSTTTAPTTTTTTTDTTTTTTTTTTTTTDTTTTTTTDTTPPPPTTTTTTITTTAATTVASTTAAPERAPAATTKQELATNGSSIWDIRAMANSNWANITWSHNYSAGTDFVVKYITSNKTEKSIPVKAQTPSSVQLADLTPGMMYKLWVFPIWSNPSEHPYITFTTSSAYTKNHVDIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPVRDNKDEHLNPEDKNVEDGSFDYSDEDNKPLPNSQTSLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
SIO_010081: NFASC
subclass of: SO_0000673
so part of: NFASC
location: join(522581..522674,525225..525242,525506..525611,526263..526459,527568..527690,528562..528732,536089..536200,537007..537191,537698..537829,538343..538486,538869..538980,539082..539248,539822..539969,540545..540669,541502..541537,542362..542463,542883..543080,544076..544146,544711..544933,550672..550794,551391..551564,553543..553557,560002..560268,562350..562466,564214..564369,568940..569071,569702..569771,575570..575801)
location: region:522581-575801:1
so has part: feature:522581-522674:1:exon
so has part: feature:525225-525242:1:exon
so has part: feature:525506-525611:1:exon
so has part: feature:526263-526459:1:exon
so has part: feature:527568-527690:1:exon
so has part: feature:528562-528732:1:exon
so has part: feature:536089-536200:1:exon
so has part: feature:537007-537191:1:exon
so has part: feature:537698-537829:1:exon
so has part: feature:538343-538486:1:exon
so has part: feature:538869-538980:1:exon
so has part: feature:539082-539248:1:exon
so has part: feature:539822-539969:1:exon
so has part: feature:540545-540669:1:exon
so has part: feature:541502-541537:1:exon
so has part: feature:542362-542463:1:exon
so has part: feature:542883-543080:1:exon
so has part: feature:544076-544146:1:exon
so has part: feature:544711-544933:1:exon
so has part: feature:550672-550794:1:exon
so has part: feature:551391-551564:1:exon
so has part: feature:553543-553557:1:exon
so has part: feature:560002-560268:1:exon
so has part: feature:562350-562466:1:exon
so has part: feature:564214-564369:1:exon
so has part: feature:568940-569071:1:exon
so has part: feature:569702-569771:1:exon
so has part: feature:575570-575801:1:exon

XP_008497698.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:522581-522674:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:525225-525242:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:525506-525611:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:526263-526459:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:527568-527690:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:528562-528732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:536089-536200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:537007-537191:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:537698-537829:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:538343-538486:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:538869-538980:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:539082-539248:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:539822-539969:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:540545-540669:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:541502-541537:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:542362-542463:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:542883-543080:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:544076-544146:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:544711-544933:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:550672-550794:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:551391-551564:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:553543-553557:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:560002-560268:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:562350-562466:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:564214-564369:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:568940-569071:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:569702-569771:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:575570-575801:1:exon

NFASC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NFASC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurofascin isoform X5
translation: MVLGRDLIPWAGIVLALCLQHLGSTIEVPLDSNIQSELPQPPTITKQSVKDYIVDPRDNIFIECEAKGNPVPIFSWTRNGKFFNVAKDPKVSMRRRSGTLVIDFHSGGRPEDYEGEYQCFARNDYGTALSSKIHLQVSKSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPSPVIFWMSSSMEPIQQDKRVSQGQNGDLYFSNVLLQDAQTDYSCNARFHFTHTIQQKNPYTLKVKTTRGITETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPQNLILAPGEDGRLVCRANGNPKPAIQWLVNGEPIEASPPNPSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRILAPRNQLIKVIQNNRTRLDCPFFGSPIPTLRWFKNGQGNTLDGGNYKAHENGSLEMAMARKEDQGIYTCVATNILGKAEAQVRLEVKDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKVTVTWLKDEAPLYLGNRMKKEDDGLTIYGVAEKDQGDYTCVASTELDKDSAKAFLTVLAVPANRLRDLPKERPDRPRDLELSDLAERSVRLTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHSRYPGSVNSAILSLSPYVNYQFRVIAVNDVGSSLPSLPSERYQTNGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKVPRHVVWNTPIYVPYEIKVQAENDFGRAPEPDTYIGYSGEDLPSSPRYLRIRQPNLESINLEWDQPEHPNGVLTGYSLRYQAFNGSKTGRTLVENFSPNQTKFTLQRTDPISRYRFFLRARTQVGEGETLVEESPALLNEATPSPAATELPPTTIDLTSTTTAPTTTTTTTDTTTTTTTTTTTTTDTTTTTTTDTTPPPPTTTTTTITTTAATTVASTTAAPERAPAATTKQELAYTKNHVDIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPVRDNKDEHLNPEDKNVEDGSFDYSDEDNKPLPNSQTSLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
SIO_010081: NFASC
subclass of: SO_0000673
so part of: NFASC
location: join(522581..522674,525225..525242,525506..525611,526263..526459,527568..527690,528562..528732,536089..536200,537007..537191,537698..537829,538343..538486,538869..538980,539082..539248,539822..539969,540545..540669,541502..541537,542362..542463,542883..543080,544076..544146,544711..544933,550672..550794,551391..551564,553543..553557,560002..560268,568940..569071,569702..569771,575570..575801)
location: region:522581-575801:1
so has part: feature:522581-522674:1:exon
so has part: feature:525225-525242:1:exon
so has part: feature:525506-525611:1:exon
so has part: feature:526263-526459:1:exon
so has part: feature:527568-527690:1:exon
so has part: feature:528562-528732:1:exon
so has part: feature:536089-536200:1:exon
so has part: feature:537007-537191:1:exon
so has part: feature:537698-537829:1:exon
so has part: feature:538343-538486:1:exon
so has part: feature:538869-538980:1:exon
so has part: feature:539082-539248:1:exon
so has part: feature:539822-539969:1:exon
so has part: feature:540545-540669:1:exon
so has part: feature:541502-541537:1:exon
so has part: feature:542362-542463:1:exon
so has part: feature:542883-543080:1:exon
so has part: feature:544076-544146:1:exon
so has part: feature:544711-544933:1:exon
so has part: feature:550672-550794:1:exon
so has part: feature:551391-551564:1:exon
so has part: feature:553543-553557:1:exon
so has part: feature:560002-560268:1:exon
so has part: feature:568940-569071:1:exon
so has part: feature:569702-569771:1:exon
so has part: feature:575570-575801:1:exon

XP_008497701.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:522581-522674:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:525225-525242:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:525506-525611:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:526263-526459:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:527568-527690:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:528562-528732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:536089-536200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:537007-537191:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:537698-537829:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:538343-538486:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:538869-538980:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:539082-539248:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:539822-539969:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:540545-540669:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:541502-541537:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:542362-542463:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:542883-543080:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:544076-544146:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:544711-544933:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:550672-550794:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:551391-551564:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:553543-553557:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:560002-560268:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:568940-569071:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:569702-569771:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:575570-575801:1:exon

NFASC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NFASC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurofascin isoform X7
translation: MVLGRDLIPWAGIVLALCLQHLGSTIEVPLDSNIQSELPQPPTITKQSVKDYIVDPRDNIFIECEAKGNPVPIFSWTRNGKFFNVAKDPKVSMRRRSGTLVIDFHSGGRPEDYEGEYQCFARNDYGTALSSKIHLQVSKSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPSPVIFWMSSSMEPIQQDKRVSQGQNGDLYFSNVLLQDAQTDYSCNARFHFTHTIQQKNPYTLKVKTTRGITETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPQNLILAPGEDGRLVCRANGNPKPAIQWLVNGEPIEASPPNPSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRILAPRNQLIKVIQNNRTRLDCPFFGSPIPTLRWFKNGQGNTLDGGNYKAHENGSLEMAMARKEDQGIYTCVATNILGKAEAQVRLEVKDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKVTVTWLKDEAPLYLGNRMKKEDDGLTIYGVAEKDQGDYTCVASTELDKDSAKAFLTVLAVPANRLRDLPKERPDRPRDLELSDLAERSVRLTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHSRYPGSVNSAILSLSPYVNYQFRVIAVNDVGSSLPSLPSERYQTNGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKVPRHVVWNTPIYVPYEIKVQAENDFGRAPEPDTYIGYSGEDLPSSPRYLRIRQPNLESINLEWDQPEHPNGVLTGYSLRYQAFNGSKTGRTLVENFSPNQTKFTLQRTDPISRYRFFLRARTQVGEGETLVEESPALLNEATPSPAYTKNHVDIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPVRDNKDEHLNPEDKNVEDGSFDYSDEDNKPLPNSQTSLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
SIO_010081: NFASC
subclass of: SO_0000673
so part of: NFASC
location: join(522581..522674,525225..525242,525506..525611,526263..526459,527568..527690,528562..528732,536089..536200,537007..537191,537698..537829,538343..538486,538869..538980,539082..539248,539822..539969,540545..540669,541502..541537,542362..542463,542883..543080,544076..544146,544711..544933,550672..550794,551391..551564,553543..553557,568940..569071,569702..569771,575570..575801)
location: region:522581-575801:1
so has part: feature:522581-522674:1:exon
so has part: feature:525225-525242:1:exon
so has part: feature:525506-525611:1:exon
so has part: feature:526263-526459:1:exon
so has part: feature:527568-527690:1:exon
so has part: feature:528562-528732:1:exon
so has part: feature:536089-536200:1:exon
so has part: feature:537007-537191:1:exon
so has part: feature:537698-537829:1:exon
so has part: feature:538343-538486:1:exon
so has part: feature:538869-538980:1:exon
so has part: feature:539082-539248:1:exon
so has part: feature:539822-539969:1:exon
so has part: feature:540545-540669:1:exon
so has part: feature:541502-541537:1:exon
so has part: feature:542362-542463:1:exon
so has part: feature:542883-543080:1:exon
so has part: feature:544076-544146:1:exon
so has part: feature:544711-544933:1:exon
so has part: feature:550672-550794:1:exon
so has part: feature:551391-551564:1:exon
so has part: feature:553543-553557:1:exon
so has part: feature:568940-569071:1:exon
so has part: feature:569702-569771:1:exon
so has part: feature:575570-575801:1:exon

XP_008497702.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:522581-522674:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:525225-525242:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:525506-525611:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:526263-526459:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:527568-527690:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:528562-528732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:536089-536200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:537007-537191:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:537698-537829:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:538343-538486:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:538869-538980:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:539082-539248:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:539822-539969:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:540545-540669:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:541502-541537:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:542362-542463:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:542883-543080:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:544076-544146:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:544711-544933:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:550672-550794:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:551391-551564:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:553543-553557:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:568940-569071:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:569702-569771:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:575570-575801:1:exon

NFASC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NFASC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurofascin isoform X6
translation: MVLGRDLIPWAGIVLALCLQHLGSTIEVPLDSNIQSELPQPPTITKQSVKDYIVDPRDNIFIECEAKGNPVPIFSWTRNGKFFNVAKDPKVSMRRRSGTLVIDFHSGGRPEDYEGEYQCFARNDYGTALSSKIHLQVSKSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPSPVIFWMSSSMEPIQQDKRVSQGQNGDLYFSNVLLQDAQTDYSCNARFHFTHTIQQKNPYTLKVKTTRGITETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPQNLILAPGEDGRLVCRANGNPKPAIQWLVNGEPIEASPPNPSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRILAPRNQLIKVIQNNRTRLDCPFFGSPIPTLRWFKNGQGNTLDGGNYKAHENGSLEMAMARKEDQGIYTCVATNILGKAEAQVRLEVKDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKVTVTWLKDEAPLYLGNRMKKEDDGLTIYGVAEKDQGDYTCVASTELDKDSAKAFLTVLAVPANRLRDLPKERPDRPRDLELSDLAERSVRLTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHSRYPGSVNSAILSLSPYVNYQFRVIAVNDVGSSLPSLPSERYQTNGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKVPRHVVWNTPIYVPYEIKVQAENDFGRAPEPDTYIGYSGEDLPSSPRYLRIRQPNLESINLEWDQPEHPNGVLTGYSLRYQAFNGSKTGRTLVENFSPNQTKFTLQRTDPISRYRFFLRARTQVGEGETLVEESPALLNEAYTKNHVDIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPVRDNKDEHLNPEDKNVEDGSFDYSDEDNKPLPNSQTSLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
SIO_010081: NFASC
subclass of: SO_0000673
so part of: NFASC
location: join(522581..522674,525225..525242,525506..525611,526263..526459,527568..527690,528562..528732,536089..536200,537007..537191,537698..537829,538343..538486,538869..538980,539082..539248,539822..539969,540545..540669,541502..541537,542362..542463,542883..543080,544076..544146,544711..544933,550672..550794,551391..551564,568940..569071,569702..569771,575570..575801)
location: region:522581-575801:1
so has part: feature:522581-522674:1:exon
so has part: feature:525225-525242:1:exon
so has part: feature:525506-525611:1:exon
so has part: feature:526263-526459:1:exon
so has part: feature:527568-527690:1:exon
so has part: feature:528562-528732:1:exon
so has part: feature:536089-536200:1:exon
so has part: feature:537007-537191:1:exon
so has part: feature:537698-537829:1:exon
so has part: feature:538343-538486:1:exon
so has part: feature:538869-538980:1:exon
so has part: feature:539082-539248:1:exon
so has part: feature:539822-539969:1:exon
so has part: feature:540545-540669:1:exon
so has part: feature:541502-541537:1:exon
so has part: feature:542362-542463:1:exon
so has part: feature:542883-543080:1:exon
so has part: feature:544076-544146:1:exon
so has part: feature:544711-544933:1:exon
so has part: feature:550672-550794:1:exon
so has part: feature:551391-551564:1:exon
so has part: feature:568940-569071:1:exon
so has part: feature:569702-569771:1:exon
so has part: feature:575570-575801:1:exon

XP_008497703.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:522581-522674:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:525225-525242:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:525506-525611:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:526263-526459:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:527568-527690:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:528562-528732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:536089-536200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:537007-537191:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:537698-537829:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:538343-538486:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:538869-538980:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:539082-539248:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:539822-539969:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:540545-540669:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:541502-541537:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:542362-542463:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:542883-543080:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:544076-544146:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:544711-544933:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:550672-550794:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:551391-551564:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:568940-569071:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:569702-569771:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:575570-575801:1:exon

NFASC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NFASC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurofascin isoform X4
translation: MVLGRDLIPWAGIVLALCLQHLGSTIEVPLDLPQPPTITKQSVKDYIVDPRDNIFIECEAKGNPVPIFSWTRNGKFFNVAKDPKVSMRRRSGTLVIDFHSGGRPEDYEGEYQCFARNDYGTALSSKIHLQVSKSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPSPVIFWMSSSMEPIQQDKRVSQGQNGDLYFSNVLLQDAQTDYSCNARFHFTHTIQQKNPYTLKVKTKKPHNETSLGYHTAMYSARGITETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPQNLILAPGEDGRLVCRANGNPKPAIQWLVNGEPIEASPPNPSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRILAPRNQLIKVIQNNRTRLDCPFFGSPIPTLRWFKNGQGNTLDGGNYKAHENGSLEMAMARKEDQGIYTCVATNILGKAEAQVRLEVKDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKVTVTWLKDEAPLYLGNRMKKEDDGLTIYGVAEKDQGDYTCVASTELDKDSAKAFLTVLERPDRPRDLELSDLAERSVRLTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHSRYPGSVNSAILSLSPYVNYQFRVIAVNDVGSSLPSLPSERYQTNGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKVPRHVVWNTPIYVPYEIKVQAENDFGRAPEPDTYIGYSGEDYPKAAPTDVGIRIINSTAIALTWTRVHLDTIQGQLKEYRAYFWRDSSLLKNLWVSKKRQFVSFPGDRNRGIVSRLFPYSNYKLEMVVTNGRGDGPRSEVKEFPTPEGVPSSPRYLRIRQPNLESINLEWDQPEHPNGVLTGYSLRYQAFNGSKTGRTLVENFSPNQTKFTLQRTDPISRYRFFLRARTQVGEGETLVEESPALLNEATPSPAYTKNHVDIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPVRDNKDEHLNPEDKNVEDGSFDYRSLESDEDNKPLPNSQTSLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
SIO_010081: NFASC
subclass of: SO_0000673
so part of: NFASC
location: join(522581..522674,525506..525611,526263..526459,527568..527690,528562..528732,531274..531324,536089..536200,537007..537191,537698..537829,538343..538486,538869..538980,539082..539248,539822..539969,540545..540669,542362..542463,542883..543080,544076..544146,544711..544933,546545..546660,547922..548126,550672..550794,551391..551564,553543..553557,568940..569071,569702..569771,573144..573155,575570..575801)
location: region:522581-575801:1
so has part: feature:522581-522674:1:exon
so has part: feature:525506-525611:1:exon
so has part: feature:526263-526459:1:exon
so has part: feature:527568-527690:1:exon
so has part: feature:528562-528732:1:exon
so has part: feature:531274-531324:1:exon
so has part: feature:536089-536200:1:exon
so has part: feature:537007-537191:1:exon
so has part: feature:537698-537829:1:exon
so has part: feature:538343-538486:1:exon
so has part: feature:538869-538980:1:exon
so has part: feature:539082-539248:1:exon
so has part: feature:539822-539969:1:exon
so has part: feature:540545-540669:1:exon
so has part: feature:542362-542463:1:exon
so has part: feature:542883-543080:1:exon
so has part: feature:544076-544146:1:exon
so has part: feature:544711-544933:1:exon
so has part: feature:546545-546660:1:exon
so has part: feature:547922-548126:1:exon
so has part: feature:550672-550794:1:exon
so has part: feature:551391-551564:1:exon
so has part: feature:553543-553557:1:exon
so has part: feature:568940-569071:1:exon
so has part: feature:569702-569771:1:exon
so has part: feature:573144-573155:1:exon
so has part: feature:575570-575801:1:exon

XP_008497699.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:522581-522674:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:525506-525611:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526263-526459:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:527568-527690:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:528562-528732:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:531274-531324:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:536089-536200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:537007-537191:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:537698-537829:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:538343-538486:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:538869-538980:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:539082-539248:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:539822-539969:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:540545-540669:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:542362-542463:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:542883-543080:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:544076-544146:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:544711-544933:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:546545-546660:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:547922-548126:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:550672-550794:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:551391-551564:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:553543-553557:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:568940-569071:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:569702-569771:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:573144-573155:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:575570-575801:1:exon

NFASC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NFASC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurofascin isoform X3
translation: MVLGRDLIPWAGIVLALCLQHLGSTIEVPLDLPQPPTITKQSVKDYIVDPRDNIFIECEAKGNPVPIFSWTRNGKFFNVAKDPKVSMRRRSGTLVIDFHSGGRPEDYEGEYQCFARNDYGTALSSKIHLQVSKSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPSPVIFWMSSSMEPIQQDKRVSQGQNGDLYFSNVLLQDAQTDYSCNARFHFTHTIQQKNPYTLKVKTKKPHNETSLGYHTAMYSARGITETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPQNLILAPGEDGRLVCRANGNPKPAIQWLVNGEPIEASPPNPSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRILAPRNQLIKVIQNNRTRLDCPFFGSPIPTLRWFKNGQGNTLDGGNYKAHENGSLEMAMARKEDQGIYTCVATNILGKAEAQVRLEVKDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKVTVTWLKDEAPLYLGNRMKKEDDGLTIYGVAEKDQGDYTCVASTELDKDSAKAFLTVLERPDRPRDLELSDLAERSVRLTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHSRYPGSVNSAILSLSPYVNYQFRVIAVNDVGSSLPSLPSERYQTNGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKVPRHVVWNTPIYVPYEIKVQAENDFGRAPEPDTYIGYSGEDYPKAAPTDVGIRIINSTAIALTWTRVHLDTIQGQLKEYRAYFWRDSSLLKNLWVSKKRQFVSFPGDRNRGIVSRLFPYSNYKLEMVVTNGRGDGPRSEVKEFPTPEGVPSSPRYLRIRQPNLESINLEWDQPEHPNGVLTGYSLRYQAFNGSKTGRTLVENFSPNQTKFTLQRTDPISRYRFFLRARTQVGEGETLVEESPALLNEAYTKNHVDIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPVRDNKDEHLNPEDKNVEDGSFDYSDEDNKPLPNSQTSLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
SIO_010081: NFASC
subclass of: SO_0000673
so part of: NFASC
location: join(522581..522674,525506..525611,526263..526459,527568..527690,528562..528732,531274..531324,536089..536200,537007..537191,537698..537829,538343..538486,538869..538980,539082..539248,539822..539969,540545..540669,542362..542463,542883..543080,544076..544146,544711..544933,546545..546660,547922..548126,550672..550794,551391..551564,568940..569071,569702..569771,575570..575801)
location: region:522581-575801:1
so has part: feature:522581-522674:1:exon
so has part: feature:525506-525611:1:exon
so has part: feature:526263-526459:1:exon
so has part: feature:527568-527690:1:exon
so has part: feature:528562-528732:1:exon
so has part: feature:531274-531324:1:exon
so has part: feature:536089-536200:1:exon
so has part: feature:537007-537191:1:exon
so has part: feature:537698-537829:1:exon
so has part: feature:538343-538486:1:exon
so has part: feature:538869-538980:1:exon
so has part: feature:539082-539248:1:exon
so has part: feature:539822-539969:1:exon
so has part: feature:540545-540669:1:exon
so has part: feature:542362-542463:1:exon
so has part: feature:542883-543080:1:exon
so has part: feature:544076-544146:1:exon
so has part: feature:544711-544933:1:exon
so has part: feature:546545-546660:1:exon
so has part: feature:547922-548126:1:exon
so has part: feature:550672-550794:1:exon
so has part: feature:551391-551564:1:exon
so has part: feature:568940-569071:1:exon
so has part: feature:569702-569771:1:exon
so has part: feature:575570-575801:1:exon

XP_008497700.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:522581-522674:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:525506-525611:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526263-526459:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:527568-527690:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:528562-528732:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:531274-531324:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:536089-536200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:537007-537191:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:537698-537829:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:538343-538486:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:538869-538980:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:539082-539248:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:539822-539969:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:540545-540669:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:542362-542463:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:542883-543080:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:544076-544146:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:544711-544933:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:546545-546660:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:547922-548126:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:550672-550794:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:551391-551564:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:568940-569071:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:569702-569771:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:575570-575801:1:exon

NFASC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NFASC
product: neurofascin, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030465390.1
SIO_010081: NFASC
subclass of: SO_0000673
so part of: NFASC
location: join(525510..525611,526263..526459,527568..527690,528562..528732,531274..531324,536089..536200,537007..537191,537698..537829,538343..538486,538869..538980,539082..539248,539822..539969,540545..540669,542362..542463,542883..543080,544076..544146,544711..544933,546545..546660,547922..548126,550672..550794,551391..551564,553543..553557,568940..569071,569702..569771,575570..575817)
location: region:525510-575817:1
so has part: feature:525510-525611:1:exon
so has part: feature:526263-526459:1:exon
so has part: feature:527568-527690:1:exon
so has part: feature:528562-528732:1:exon
so has part: feature:531274-531324:1:exon
so has part: feature:536089-536200:1:exon
so has part: feature:537007-537191:1:exon
so has part: feature:537698-537829:1:exon
so has part: feature:538343-538486:1:exon
so has part: feature:538869-538980:1:exon
so has part: feature:539082-539248:1:exon
so has part: feature:539822-539969:1:exon
so has part: feature:540545-540669:1:exon
so has part: feature:542362-542463:1:exon
so has part: feature:542883-543080:1:exon
so has part: feature:544076-544146:1:exon
so has part: feature:544711-544933:1:exon
so has part: feature:546545-546660:1:exon
so has part: feature:547922-548126:1:exon
so has part: feature:550672-550794:1:exon
so has part: feature:551391-551564:1:exon
so has part: feature:553543-553557:1:exon
so has part: feature:568940-569071:1:exon
so has part: feature:569702-569771:1:exon
so has part: feature:575570-575817:1:exon

position:525510:1
position: 525510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525510-525611:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:526263-526459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:527568-527690:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:528562-528732:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:531274-531324:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:536089-536200:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:537007-537191:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:537698-537829:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:538343-538486:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:538869-538980:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:539082-539248:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:539822-539969:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:540545-540669:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:542362-542463:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:542883-543080:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:544076-544146:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:544711-544933:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:546545-546660:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:547922-548126:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:550672-550794:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:551391-551564:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:553543-553557:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:568940-569071:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:569702-569771:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:575570-575817:1:exon

NFASC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NFASC
product: neurofascin, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030465391.1
SIO_010081: NFASC
subclass of: SO_0000673
so part of: NFASC
location: join(525510..525611,526263..526459,527568..527690,528562..528732,531274..531324,536089..536200,537007..537191,537698..537829,538343..538486,538869..538980,539082..539248,539822..539969,540545..540669,542362..542463,542883..543080,544076..544146,544711..544933,550672..550794,551391..551564,568940..569071,569702..569771,575570..575817)
location: region:525510-575817:1
so has part: feature:525510-525611:1:exon
so has part: feature:526263-526459:1:exon
so has part: feature:527568-527690:1:exon
so has part: feature:528562-528732:1:exon
so has part: feature:531274-531324:1:exon
so has part: feature:536089-536200:1:exon
so has part: feature:537007-537191:1:exon
so has part: feature:537698-537829:1:exon
so has part: feature:538343-538486:1:exon
so has part: feature:538869-538980:1:exon
so has part: feature:539082-539248:1:exon
so has part: feature:539822-539969:1:exon
so has part: feature:540545-540669:1:exon
so has part: feature:542362-542463:1:exon
so has part: feature:542883-543080:1:exon
so has part: feature:544076-544146:1:exon
so has part: feature:544711-544933:1:exon
so has part: feature:550672-550794:1:exon
so has part: feature:551391-551564:1:exon
so has part: feature:568940-569071:1:exon
so has part: feature:569702-569771:1:exon
so has part: feature:575570-575817:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:525510-525611:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:526263-526459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:527568-527690:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:528562-528732:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:531274-531324:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:536089-536200:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:537007-537191:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:537698-537829:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:538343-538486:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:538869-538980:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:539082-539248:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:539822-539969:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:540545-540669:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:542362-542463:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:542883-543080:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:544076-544146:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:544711-544933:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:550672-550794:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:551391-551564:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:568940-569071:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:569702-569771:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:575570-575817:1:exon

NFASC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NFASC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurofascin isoform X8
translation: MRRRSGTLVIDFHSGGRPEDYEGEYQCFARNDYGTALSSKIHLQVSKSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPSPVIFWMSSSMEPIQQDKRVSQGQNGDLYFSNVLLQDAQTDYSCNARFHFTHTIQQKNPYTLKVKTKKPHNETSLGYHTAMYSARGITETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPQNLILAPGEDGRLVCRANGNPKPAIQWLVNGEPIEASPPNPSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRILAPRNQLIKVIQNNRTRLDCPFFGSPIPTLRWFKNGQGNTLDGGNYKAHENGSLEMAMARKEDQGIYTCVATNILGKAEAQVRLEVKDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKVTVTWLKDEAPLYLGNRMKKEDDGLTIYGVAEKDQGDYTCVASTELDKDSAKAFLTVLERPDRPRDLELSDLAERSVRLTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHSRYPGSVNSAILSLSPYVNYQFRVIAVNDVGSSLPSLPSERYQTNGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKVPRHVVWNTPIYVPYEIKVQAENDFGRAPEPDTYIGYSGEDYPKAAPTDVGIRIINSTAIALTWTRVHLDTIQGQLKEYRAYFWRDSSLLKNLWVSKKRQFVSFPGDRNRGIVSRLFPYSNYKLEMVVTNGRGDGPRSEVKEFPTPEGVPSSPRYLRIRQPNLESINLEWDQPEHPNGVLTGYSLRYQAFNGSKTGRTLVENFSPNQTKFTLQRTDPISRYRFFLRARTQVGEGETLVEESPALLNEATPSPAYTKNHVDIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPVRDNKDEHLNPEDKNVEDGSFDYSDEDNKPLPNSQTSLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
SIO_010081: NFASC
subclass of: SO_0000673
so part of: NFASC
location: join(526321..526459,527568..527690,528562..528732,531274..531324,536089..536200,537007..537191,537698..537829,538343..538486,538869..538980,539082..539248,539822..539969,540545..540669,542362..542463,542883..543080,544076..544146,544711..544933,546545..546660,547922..548126,550672..550794,551391..551564,553543..553557,568940..569071,569702..569771,575570..575801)
location: region:526321-575801:1
so has part: feature:526321-526459:1:exon
so has part: feature:527568-527690:1:exon
so has part: feature:528562-528732:1:exon
so has part: feature:531274-531324:1:exon
so has part: feature:536089-536200:1:exon
so has part: feature:537007-537191:1:exon
so has part: feature:537698-537829:1:exon
so has part: feature:538343-538486:1:exon
so has part: feature:538869-538980:1:exon
so has part: feature:539082-539248:1:exon
so has part: feature:539822-539969:1:exon
so has part: feature:540545-540669:1:exon
so has part: feature:542362-542463:1:exon
so has part: feature:542883-543080:1:exon
so has part: feature:544076-544146:1:exon
so has part: feature:544711-544933:1:exon
so has part: feature:546545-546660:1:exon
so has part: feature:547922-548126:1:exon
so has part: feature:550672-550794:1:exon
so has part: feature:551391-551564:1:exon
so has part: feature:553543-553557:1:exon
so has part: feature:568940-569071:1:exon
so has part: feature:569702-569771:1:exon
so has part: feature:575570-575801:1:exon

XP_030321250.1
type: Protein
SIO_000068: ncbiprotein

position:526321:1
position: 526321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:526321-526459:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:527568-527690:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:528562-528732:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:531274-531324:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:536089-536200:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:537007-537191:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:537698-537829:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:538343-538486:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:538869-538980:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:539082-539248:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:539822-539969:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:540545-540669:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:542362-542463:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:542883-543080:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:544076-544146:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:544711-544933:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:546545-546660:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:547922-548126:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:550672-550794:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:551391-551564:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:553543-553557:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:568940-569071:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:569702-569771:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:575570-575801:1:exon

NFASC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NFASC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurofascin isoform X9
translation: MRRRSGTLVIDFHSGGRPEDYEGEYQCFARNDYGTALSSKIHLQVSKSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPSPVIFWMSSSMEPIQQDKRVSQGQNGDLYFSNVLLQDAQTDYSCNARFHFTHTIQQKNPYTLKVKTKKPHNETSLGYHTAMYSARGITETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPQNLILAPGEDGRLVCRANGNPKPAIQWLVNGEPIEASPPNPSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRILAPRNQLIKVIQNNRTRLDCPFFGSPIPTLRWFKNGQGNTLDGGNYKAHENGSLEMAMARKEDQGIYTCVATNILGKAEAQVRLEVKDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKVTVTWLKDEAPLYLGNRMKKEDDGLTIYGVAEKDQGDYTCVASTELDKDSAKAFLTVLERPDRPRDLELSDLAERSVRLTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHSRYPGSVNSAILSLSPYVNYQFRVIAVNDVGSSLPSLPSERYQTNGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKVPRHVVWNTPIYVPYEIKVQAENDFGRAPEPDTYIGYSGEDLPSSPRYLRIRQPNLESINLEWDQPEHPNGVLTGYSLRYQAFNGSKTGRTLVENFSPNQTKFTLQRTDPISRYRFFLRARTQVGEGETLVEESPALLNEAYTKNHVDIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPVRDNKDEHLNPEDKNVEDGSFDYSDEDNKPLPNSQTSLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
SIO_010081: NFASC
subclass of: SO_0000673
so part of: NFASC
location: join(526321..526459,527568..527690,528562..528732,531274..531324,536089..536200,537007..537191,537698..537829,538343..538486,538869..538980,539082..539248,539822..539969,540545..540669,542362..542463,542883..543080,544076..544146,544711..544933,550672..550794,551391..551564,568940..569071,569702..569771,575570..575801)
location: region:526321-575801:1
so has part: feature:526321-526459:1:exon
so has part: feature:527568-527690:1:exon
so has part: feature:528562-528732:1:exon
so has part: feature:531274-531324:1:exon
so has part: feature:536089-536200:1:exon
so has part: feature:537007-537191:1:exon
so has part: feature:537698-537829:1:exon
so has part: feature:538343-538486:1:exon
so has part: feature:538869-538980:1:exon
so has part: feature:539082-539248:1:exon
so has part: feature:539822-539969:1:exon
so has part: feature:540545-540669:1:exon
so has part: feature:542362-542463:1:exon
so has part: feature:542883-543080:1:exon
so has part: feature:544076-544146:1:exon
so has part: feature:544711-544933:1:exon
so has part: feature:550672-550794:1:exon
so has part: feature:551391-551564:1:exon
so has part: feature:568940-569071:1:exon
so has part: feature:569702-569771:1:exon
so has part: feature:575570-575801:1:exon

XP_030321251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:526321-526459:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:527568-527690:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:528562-528732:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:531274-531324:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:536089-536200:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:537007-537191:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:537698-537829:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:538343-538486:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:538869-538980:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:539082-539248:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:539822-539969:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:540545-540669:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:542362-542463:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:542883-543080:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:544076-544146:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:544711-544933:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:550672-550794:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:551391-551564:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:568940-569071:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:569702-569771:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:575570-575801:1:exon

CNTN2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: CNTN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 593505..609360
location: region:593505-609360:1
so has part: feature:593505-609360:1:exon
subclass of: SO_0000010

103533592
type: Gene
SIO_000068: ncbigene

position:593505:1
position: 593505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:609360:1
position: 609360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:593505-609360:1:exon

CNTN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CNTN2
product: contactin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 3% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008499482.2
SIO_010081: CNTN2
subclass of: SO_0000673
so part of: CNTN2
location: join(593505..593550,597929..598073,598286..598461,598741..598836,599122..599331,599861..599960,600124..600299,600993..601129,601654..601783,602621..602771,603063..603190,603523..603698,603863..603983,604557..604715,604845..604994,605697..605767,605996..606230,607094..607209,607578..607764,608118..608230,608319..608487,609251..609360)
location: region:593505-609360:1
so has part: feature:593505-593550:1:exon
so has part: feature:597929-598073:1:exon
so has part: feature:598286-598461:1:exon
so has part: feature:598741-598836:1:exon
so has part: feature:599122-599331:1:exon
so has part: feature:599861-599960:1:exon
so has part: feature:600124-600299:1:exon
so has part: feature:600993-601129:1:exon
so has part: feature:601654-601783:1:exon
so has part: feature:602621-602771:1:exon
so has part: feature:603063-603190:1:exon
so has part: feature:603523-603698:1:exon
so has part: feature:603863-603983:1:exon
so has part: feature:604557-604715:1:exon
so has part: feature:604845-604994:1:exon
so has part: feature:605697-605767:1:exon
so has part: feature:605996-606230:1:exon
so has part: feature:607094-607209:1:exon
so has part: feature:607578-607764:1:exon
so has part: feature:608118-608230:1:exon
so has part: feature:608319-608487:1:exon
so has part: feature:609251-609360:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:593505-593550:1:exon

position:593550:1
position: 593550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:597929-598073:1:exon

position:597929:1
position: 597929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598073:1
position: 598073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:598286-598461:1:exon

position:598286:1
position: 598286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598461:1
position: 598461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:598741-598836:1:exon

position:598741:1
position: 598741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598836:1
position: 598836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:599122-599331:1:exon

position:599122:1
position: 599122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599331:1
position: 599331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:599861-599960:1:exon

position:599861:1
position: 599861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599960:1
position: 599960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:600124-600299:1:exon

position:600124:1
position: 600124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600299:1
position: 600299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:600993-601129:1:exon

position:600993:1
position: 600993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601129:1
position: 601129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:601654-601783:1:exon

position:601654:1
position: 601654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601783:1
position: 601783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:602621-602771:1:exon

position:602621:1
position: 602621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602771:1
position: 602771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:603063-603190:1:exon

position:603063:1
position: 603063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603190:1
position: 603190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:603523-603698:1:exon

position:603523:1
position: 603523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603698:1
position: 603698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:603863-603983:1:exon

position:603863:1
position: 603863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603983:1
position: 603983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:604557-604715:1:exon

position:604557:1
position: 604557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604715:1
position: 604715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:604845-604994:1:exon

position:604845:1
position: 604845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604994:1
position: 604994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:605697-605767:1:exon

position:605697:1
position: 605697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:605767:1
position: 605767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:605996-606230:1:exon

position:605996:1
position: 605996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:606230:1
position: 606230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:607094-607209:1:exon

position:607094:1
position: 607094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607209:1
position: 607209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:607578-607764:1:exon

position:607578:1
position: 607578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607764:1
position: 607764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:608118-608230:1:exon

position:608118:1
position: 608118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608230:1
position: 608230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:608319-608487:1:exon

position:608319:1
position: 608319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608487:1
position: 608487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:609251-609360:1:exon

position:609251:1
position: 609251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CNTN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CNTN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: contactin-2
translation: MGSTAGILCTSLAVLVWCQAQSSTRNYGPVFEEQPAHTLFPEGSEEEKVTLACRARASPPATYRWKMNGTELKMEPDSRYRLVAGDLVISNPVKAKDAGSYQCVASNSRGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVMFTCSPPPHYPGLSYRWLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSRLSLAAEDARQYAPSIKARFPADTYALTGQVVTLECFAFGNPVPRIKWRKLDGSQSSKWIGSEPLLQIQDVGFQDEGTYECEAENIKGRDSYQGRIIIQAQPEWLEVISDTEADIGSDLRWSCAASGKPRPAVRWLRDGQPLTSQNRIEVSGGELRFSKLVLEDSGMYQCVAENKHGTVYASAELIVQALAPDFRLNPVKRLIPAARSGKVIIPCQPRAAPKATVLWTKGTELLINSSRVTITRDGTLILQNISKSDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINVGENLTLQCHASHDPTMDLTFTWSLDDFPIDFDKSEGHYQRASLKETIGDLSIFNTQLKHAGRYTCTAQTVVDSASESATLTVRGPPGPPGGVVVRDISDTSVQLSWSRGFDNHSPIARYLIEARTLLSSNWKQMRTNPGNIEGNAETALVVNLIPWMDYEFRVLASNILGVGEPSLPSSKIRTKEAAPTVAPSGLGGGGGAPNELIINWTPTLRDYQNGDGFGYILSFRKKGTQEWLTAKVPHAESLHYVYHNESIGPYTPFEVKIKAYNRKGEGPESLTAIVYSAEEEPKVAPFRVLAKSVLSSEMDVSWEPVEQGDMTGVLLGYEIRYWKDGDKEEAADRVRTAGLVTSAHVTGLNPNTRYHLSVRAYNRAGTGPPSPSTNITTTKPPPKKPPSNISWTFSGSTVSIKWDPVVAKADESAVTGYKMLYRQDSHSAPTLYLASKSRIDIPIPEDFTHAFVQIRVTGPGGDGVPAEVHILRNSGTSMMVEDSVMRPVPHGVIITTQSLVMVALISYLEL
SIO_010081: CNTN2
subclass of: SO_0000673
so part of: CNTN2
location: join(593505..593550,597929..598073,598286..598461,598741..598836,599122..599331,599861..599960,600124..600299,600993..601129,601654..601783,602621..602771,603063..603190,603523..603698,603863..603983,604557..604715,604845..604994,605697..605767,605996..606230,607094..607209,607578..607764,608118..608230,608319..608487,609251..609360)
location: region:593505-609360:1
so has part: feature:593505-593550:1:exon
so has part: feature:597929-598073:1:exon
so has part: feature:598286-598461:1:exon
so has part: feature:598741-598836:1:exon
so has part: feature:599122-599331:1:exon
so has part: feature:599861-599960:1:exon
so has part: feature:600124-600299:1:exon
so has part: feature:600993-601129:1:exon
so has part: feature:601654-601783:1:exon
so has part: feature:602621-602771:1:exon
so has part: feature:603063-603190:1:exon
so has part: feature:603523-603698:1:exon
so has part: feature:603863-603983:1:exon
so has part: feature:604557-604715:1:exon
so has part: feature:604845-604994:1:exon
so has part: feature:605697-605767:1:exon
so has part: feature:605996-606230:1:exon
so has part: feature:607094-607209:1:exon
so has part: feature:607578-607764:1:exon
so has part: feature:608118-608230:1:exon
so has part: feature:608319-608487:1:exon
so has part: feature:609251-609360:1:exon

XP_008497704.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:593505-593550:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:597929-598073:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:598286-598461:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:598741-598836:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:599122-599331:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:599861-599960:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:600124-600299:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:600993-601129:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:601654-601783:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:602621-602771:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:603063-603190:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:603523-603698:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:603863-603983:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:604557-604715:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:604845-604994:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:605697-605767:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:605996-606230:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:607094-607209:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:607578-607764:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:608118-608230:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:608319-608487:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:609251-609360:1:exon

TMEM81
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: TMEM81
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(620563..621928)
location: region:620563-621928:-1
so has part: feature:620563-621928:-1:exon
subclass of: SO_0000010

103533686
type: Gene
SIO_000068: ncbigene

position:620563:-1
position: 620563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621928:-1
position: 621928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:620563-621928:-1:exon

TMEM81
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TMEM81
product: transmembrane protein 81
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 4 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008499577.2
SIO_010081: TMEM81
subclass of: SO_0000673
so part of: TMEM81
location: complement(620563..621928)
location: region:620563-621928:-1
so has part: feature:620563-621928:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:620563-621928:-1:exon

TMEM81
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TMEM81
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 81
translation: MKTVGSSHILGVLCCTFYLPFVASFAKITIPAELSTAVAEIAVNATSCSVTCGPGFKLEEICEMTAAGEKRNCSLRRSGCLTSWACGLLHFTVPVGKPFQMNCLNSAEIGFGTHVYFYTWKFAQSLITTNDVLFKPFRNPGSAISFSPTRESDAGTYRCDMQMVKTFRVIKRIYFGVRVIPSELVDLNFQKSLTWEQKLTASKEEGKAANGTQEEREELQPCWQGRLFYEFMVGIGSGVTGGVLVGMVLCFVQRTMQRVANKLPEP
SIO_010081: TMEM81
subclass of: SO_0000673
so part of: TMEM81
location: complement(620563..621363)
location: region:620563-621363:-1
so has part: feature:620563-621363:-1:exon

XP_008497799.1
type: Protein
SIO_000068: ncbiprotein

position:621363:-1
position: 621363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:620563-621363:-1:exon

RBBP5
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: RBBP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(623365..634301)
location: region:623365-634301:-1
so has part: feature:623365-634301:-1:exon
subclass of: SO_0000010

103533593
type: Gene
SIO_000068: ncbigene

position:623365:-1
position: 623365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:634301:-1
position: 634301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623365-634301:-1:exon

RBBP5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RBBP5
product: RB binding protein 5, histone lysine methyltransferase complex subunit, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030465497.1
SIO_010081: RBBP5
subclass of: SO_0000673
so part of: RBBP5
location: complement(join(623365..625163,627352..627546,627794..628023,628159..628228,628868..628985,629495..629566,629678..629831,630067..630186,630838..630947,631396..631558,632029..632169,632855..633027,633918..633943,634219..634301))
location: region:623365-634301:-1
so has part: feature:634219-634301:-1:exon
so has part: feature:633918-633943:-1:exon
so has part: feature:632855-633027:-1:exon
so has part: feature:632029-632169:-1:exon
so has part: feature:631396-631558:-1:exon
so has part: feature:630838-630947:-1:exon
so has part: feature:630067-630186:-1:exon
so has part: feature:629678-629831:-1:exon
so has part: feature:629495-629566:-1:exon
so has part: feature:628868-628985:-1:exon
so has part: feature:628159-628228:-1:exon
so has part: feature:627794-628023:-1:exon
so has part: feature:627352-627546:-1:exon
so has part: feature:623365-625163:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:634219-634301:-1:exon

position:634219:-1
position: 634219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:633918-633943:-1:exon

position:633918:-1
position: 633918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:633943:-1
position: 633943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:632855-633027:-1:exon

position:632855:-1
position: 632855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:633027:-1
position: 633027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:632029-632169:-1:exon

position:632029:-1
position: 632029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:632169:-1
position: 632169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:631396-631558:-1:exon

position:631396:-1
position: 631396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:631558:-1
position: 631558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:630838-630947:-1:exon

position:630838:-1
position: 630838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:630947:-1
position: 630947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:630067-630186:-1:exon

position:630067:-1
position: 630067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:630186:-1
position: 630186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:629678-629831:-1:exon

position:629678:-1
position: 629678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:629831:-1
position: 629831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:629495-629566:-1:exon

position:629495:-1
position: 629495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:629566:-1
position: 629566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:628868-628985:-1:exon

position:628868:-1
position: 628868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:628985:-1
position: 628985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:628159-628228:-1:exon

position:628159:-1
position: 628159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:628228:-1
position: 628228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:627794-628023:-1:exon

position:627794:-1
position: 627794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:628023:-1
position: 628023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:627352-627546:-1:exon

position:627352:-1
position: 627352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:627546:-1
position: 627546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:623365-625163:-1:exon

position:625163:-1
position: 625163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBBP5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RBBP5
product: RB binding protein 5, histone lysine methyltransferase complex subunit, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030465499.1
SIO_010081: RBBP5
subclass of: SO_0000673
so part of: RBBP5
location: complement(join(623365..625160,627469..627546,627794..628023,628159..628228,628868..628985,629495..629566,629678..629831,630067..630186,630838..630947,631396..631558,632029..632169,632855..633027,633918..633943,634075..634146))
location: region:623365-634146:-1
so has part: feature:634075-634146:-1:exon
so has part: feature:633918-633943:-1:exon
so has part: feature:632855-633027:-1:exon
so has part: feature:632029-632169:-1:exon
so has part: feature:631396-631558:-1:exon
so has part: feature:630838-630947:-1:exon
so has part: feature:630067-630186:-1:exon
so has part: feature:629678-629831:-1:exon
so has part: feature:629495-629566:-1:exon
so has part: feature:628868-628985:-1:exon
so has part: feature:628159-628228:-1:exon
so has part: feature:627794-628023:-1:exon
so has part: feature:627469-627546:-1:exon
so has part: feature:623365-625160:-1:exon

position:634146:-1
position: 634146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:634075-634146:-1:exon

position:634075:-1
position: 634075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:633918-633943:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:632855-633027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:632029-632169:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:631396-631558:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:630838-630947:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:630067-630186:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:629678-629831:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:629495-629566:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:628868-628985:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:628159-628228:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:627794-628023:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:627469-627546:-1:exon

position:627469:-1
position: 627469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:623365-625160:-1:exon

position:625160:-1
position: 625160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBBP5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RBBP5
product: RB binding protein 5, histone lysine methyltransferase complex subunit, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030465498.1
SIO_010081: RBBP5
subclass of: SO_0000673
so part of: RBBP5
location: complement(join(623365..625163,627469..627546,627794..628023,628159..628228,628868..628985,629495..629566,629678..629831,630067..630186,630838..630947,631396..631558,632029..632169,632855..633027,633918..633943,634075..634146))
location: region:623365-634146:-1
so has part: feature:634075-634146:-1:exon
so has part: feature:633918-633943:-1:exon
so has part: feature:632855-633027:-1:exon
so has part: feature:632029-632169:-1:exon
so has part: feature:631396-631558:-1:exon
so has part: feature:630838-630947:-1:exon
so has part: feature:630067-630186:-1:exon
so has part: feature:629678-629831:-1:exon
so has part: feature:629495-629566:-1:exon
so has part: feature:628868-628985:-1:exon
so has part: feature:628159-628228:-1:exon
so has part: feature:627794-628023:-1:exon
so has part: feature:627469-627546:-1:exon
so has part: feature:623365-625163:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:634075-634146:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:633918-633943:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:632855-633027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:632029-632169:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:631396-631558:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:630838-630947:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:630067-630186:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:629678-629831:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:629495-629566:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:628868-628985:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:628159-628228:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:627794-628023:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:627469-627546:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:623365-625163:-1:exon

RBBP5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RBBP5
product: RB binding protein 5, histone lysine methyltransferase complex subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030465496.1
SIO_010081: RBBP5
subclass of: SO_0000673
so part of: RBBP5
location: complement(join(623365..625160,627352..627546,627794..628023,628159..628228,628868..628985,629495..629566,629678..629831,630067..630186,630838..630947,631396..631558,632029..632169,632855..633027,633918..633943,634075..634146))
location: region:623365-634146:-1
so has part: feature:634075-634146:-1:exon
so has part: feature:633918-633943:-1:exon
so has part: feature:632855-633027:-1:exon
so has part: feature:632029-632169:-1:exon
so has part: feature:631396-631558:-1:exon
so has part: feature:630838-630947:-1:exon
so has part: feature:630067-630186:-1:exon
so has part: feature:629678-629831:-1:exon
so has part: feature:629495-629566:-1:exon
so has part: feature:628868-628985:-1:exon
so has part: feature:628159-628228:-1:exon
so has part: feature:627794-628023:-1:exon
so has part: feature:627352-627546:-1:exon
so has part: feature:623365-625160:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:634075-634146:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:633918-633943:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:632855-633027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:632029-632169:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:631396-631558:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:630838-630947:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:630067-630186:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:629678-629831:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:629495-629566:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:628868-628985:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:628159-628228:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:627794-628023:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:627352-627546:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:623365-625160:-1:exon

RBBP5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RBBP5
product: RB binding protein 5, histone lysine methyltransferase complex subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 ESTs, 3 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_030465495.1
SIO_010081: RBBP5
subclass of: SO_0000673
so part of: RBBP5
location: complement(join(623365..625163,627352..627546,627794..628023,628159..628228,628868..628985,629495..629566,629678..629831,630067..630186,630838..630947,631396..631558,632029..632169,632855..633027,633918..633943,634075..634146))
location: region:623365-634146:-1
so has part: feature:634075-634146:-1:exon
so has part: feature:633918-633943:-1:exon
so has part: feature:632855-633027:-1:exon
so has part: feature:632029-632169:-1:exon
so has part: feature:631396-631558:-1:exon
so has part: feature:630838-630947:-1:exon
so has part: feature:630067-630186:-1:exon
so has part: feature:629678-629831:-1:exon
so has part: feature:629495-629566:-1:exon
so has part: feature:628868-628985:-1:exon
so has part: feature:628159-628228:-1:exon
so has part: feature:627794-628023:-1:exon
so has part: feature:627352-627546:-1:exon
so has part: feature:623365-625163:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:634075-634146:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:633918-633943:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:632855-633027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:632029-632169:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:631396-631558:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:630838-630947:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:630067-630186:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:629678-629831:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:629495-629566:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:628868-628985:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:628159-628228:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:627794-628023:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:627352-627546:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:623365-625163:-1:exon

RBBP5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RBBP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinoblastoma-binding protein 5 isoform X5
translation: MNLELLESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAKIISAHIHPVCSLCWSRDGHKLASASTDNIVSQWDVLSGDCDQRFRFPSPILKVQYHPRDQNRVLVCPMKSAPVMLTLSDSKHVVLPVDDDSDLNVVASFDRRGDYIYTGNAKGKILVLKTDTQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTCGRDGEPEPMQKLQDLVNRTPWKKCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLDVAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKSEPEQTGADAAEDEEVDVTSVDPIAAFCSSDEELEDSKALLYLPIAPEVEDPEENPYGPPPDAVQSSLTDEGMGSEKKRQSSSDGPQAPKKKPKTTNIELQGVPNDEVHPLLGVKGDGKSKKKQAGRPKGSKGGAISELL
SIO_010081: RBBP5
subclass of: SO_0000673
so part of: RBBP5
location: complement(join(625135..625160,627469..627546,627794..628023,628159..628228,628868..628985,629495..629566,629678..629831,630067..630186,630838..630947,631396..631558,632029..632169,632855..633027,633918..633943,634075..634093))
location: region:625135-634093:-1
so has part: feature:634075-634093:-1:exon
so has part: feature:633918-633943:-1:exon
so has part: feature:632855-633027:-1:exon
so has part: feature:632029-632169:-1:exon
so has part: feature:631396-631558:-1:exon
so has part: feature:630838-630947:-1:exon
so has part: feature:630067-630186:-1:exon
so has part: feature:629678-629831:-1:exon
so has part: feature:629495-629566:-1:exon
so has part: feature:628868-628985:-1:exon
so has part: feature:628159-628228:-1:exon
so has part: feature:627794-628023:-1:exon
so has part: feature:627469-627546:-1:exon
so has part: feature:625135-625160:-1:exon

XP_030321359.1
type: Protein
SIO_000068: ncbiprotein

position:625135:-1
position: 625135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:634093:-1
position: 634093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:634075-634093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:633918-633943:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:632855-633027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:632029-632169:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:631396-631558:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:630838-630947:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:630067-630186:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:629678-629831:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:629495-629566:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:628868-628985:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:628159-628228:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:627794-628023:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:627469-627546:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:625135-625160:-1:exon

RBBP5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RBBP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinoblastoma-binding protein 5 isoform X4
translation: MNLELLESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAKIISAHIHPVCSLCWSRDGHKLASASTDNIVSQWDVLSGDCDQRFRFPSPILKVQYHPRDQNRVLVCPMKSAPVMLTLSDSKHVVLPVDDDSDLNVVASFDRRGDYIYTGNAKGKILVLKTDTQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTCGRDGEPEPMQKLQDLVNRTPWKKCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLDVAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKSEPEQTGADAAEDEEVDVTSVDPIAAFCSSDEELEDSKALLYLPIAPEVEDPEENPYGPPPDAVQSSLTDEGMGSEKKRQSSSDGPQAPKKKPKTTNIELQGVPNDEVHPLLGVKGDGKSKKKQAGRPKGSKAGGAISELL
SIO_010081: RBBP5
subclass of: SO_0000673
so part of: RBBP5
location: complement(join(625135..625163,627469..627546,627794..628023,628159..628228,628868..628985,629495..629566,629678..629831,630067..630186,630838..630947,631396..631558,632029..632169,632855..633027,633918..633943,634075..634093))
location: region:625135-634093:-1
so has part: feature:634075-634093:-1:exon
so has part: feature:633918-633943:-1:exon
so has part: feature:632855-633027:-1:exon
so has part: feature:632029-632169:-1:exon
so has part: feature:631396-631558:-1:exon
so has part: feature:630838-630947:-1:exon
so has part: feature:630067-630186:-1:exon
so has part: feature:629678-629831:-1:exon
so has part: feature:629495-629566:-1:exon
so has part: feature:628868-628985:-1:exon
so has part: feature:628159-628228:-1:exon
so has part: feature:627794-628023:-1:exon
so has part: feature:627469-627546:-1:exon
so has part: feature:625135-625163:-1:exon

XP_030321358.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:634075-634093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:633918-633943:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:632855-633027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:632029-632169:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:631396-631558:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:630838-630947:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:630067-630186:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:629678-629831:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:629495-629566:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:628868-628985:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:628159-628228:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:627794-628023:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:627469-627546:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:625135-625163:-1:exon

RBBP5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RBBP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinoblastoma-binding protein 5 isoform X2
translation: MNLELLESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAKIISAHIHPVCSLCWSRDGHKLASASTDNIVSQWDVLSGDCDQRFRFPSPILKVQYHPRDQNRVLVCPMKSAPVMLTLSDSKHVVLPVDDDSDLNVVASFDRRGDYIYTGNAKGKILVLKTDTQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTCGRDGEPEPMQKLQDLVNRTPWKKCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLDVAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKSEPEQTGADAAEDEEVDVTSVDPIAAFCSSDEELEDSKALLYLPIAPEVEDPEENPYGPPPDAVQSSLTDEGMGSEKKRQSSSDGPQAPKKKPKTTNIELQGVPNDEVHPLLGVKGDGKSKKKQAGRPKGSKGKDKDSPFKPKLYKGDRGALPLEGAAKGKVQAELGQPLTGGAISELL
SIO_010081: RBBP5
subclass of: SO_0000673
so part of: RBBP5
location: complement(join(625135..625160,627352..627546,627794..628023,628159..628228,628868..628985,629495..629566,629678..629831,630067..630186,630838..630947,631396..631558,632029..632169,632855..633027,633918..633943,634075..634093))
location: region:625135-634093:-1
so has part: feature:634075-634093:-1:exon
so has part: feature:633918-633943:-1:exon
so has part: feature:632855-633027:-1:exon
so has part: feature:632029-632169:-1:exon
so has part: feature:631396-631558:-1:exon
so has part: feature:630838-630947:-1:exon
so has part: feature:630067-630186:-1:exon
so has part: feature:629678-629831:-1:exon
so has part: feature:629495-629566:-1:exon
so has part: feature:628868-628985:-1:exon
so has part: feature:628159-628228:-1:exon
so has part: feature:627794-628023:-1:exon
so has part: feature:627352-627546:-1:exon
so has part: feature:625135-625160:-1:exon

XP_030321356.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:634075-634093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:633918-633943:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:632855-633027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:632029-632169:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:631396-631558:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:630838-630947:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:630067-630186:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:629678-629831:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:629495-629566:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:628868-628985:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:628159-628228:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:627794-628023:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:627352-627546:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:625135-625160:-1:exon

RBBP5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RBBP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinoblastoma-binding protein 5 isoform X1
translation: MNLELLESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAKIISAHIHPVCSLCWSRDGHKLASASTDNIVSQWDVLSGDCDQRFRFPSPILKVQYHPRDQNRVLVCPMKSAPVMLTLSDSKHVVLPVDDDSDLNVVASFDRRGDYIYTGNAKGKILVLKTDTQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTCGRDGEPEPMQKLQDLVNRTPWKKCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLDVAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKSEPEQTGADAAEDEEVDVTSVDPIAAFCSSDEELEDSKALLYLPIAPEVEDPEENPYGPPPDAVQSSLTDEGMGSEKKRQSSSDGPQAPKKKPKTTNIELQGVPNDEVHPLLGVKGDGKSKKKQAGRPKGSKGKDKDSPFKPKLYKGDRGALPLEGAAKGKVQAELGQPLTAGGAISELL
SIO_010081: RBBP5
subclass of: SO_0000673
so part of: RBBP5
location: complement(join(625135..625163,627352..627546,627794..628023,628159..628228,628868..628985,629495..629566,629678..629831,630067..630186,630838..630947,631396..631558,632029..632169,632855..633027,633918..633943,634075..634093))
location: region:625135-634093:-1
so has part: feature:634075-634093:-1:exon
so has part: feature:633918-633943:-1:exon
so has part: feature:632855-633027:-1:exon
so has part: feature:632029-632169:-1:exon
so has part: feature:631396-631558:-1:exon
so has part: feature:630838-630947:-1:exon
so has part: feature:630067-630186:-1:exon
so has part: feature:629678-629831:-1:exon
so has part: feature:629495-629566:-1:exon
so has part: feature:628868-628985:-1:exon
so has part: feature:628159-628228:-1:exon
so has part: feature:627794-628023:-1:exon
so has part: feature:627352-627546:-1:exon
so has part: feature:625135-625163:-1:exon

XP_030321355.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:634075-634093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:633918-633943:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:632855-633027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:632029-632169:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:631396-631558:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:630838-630947:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:630067-630186:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:629678-629831:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:629495-629566:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:628868-628985:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:628159-628228:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:627794-628023:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:627352-627546:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:625135-625163:-1:exon

RBBP5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RBBP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinoblastoma-binding protein 5 isoform X3
translation: MALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAKIISAHIHPVCSLCWSRDGHKLASASTDNIVSQWDVLSGDCDQRFRFPSPILKVQYHPRDQNRVLVCPMKSAPVMLTLSDSKHVVLPVDDDSDLNVVASFDRRGDYIYTGNAKGKILVLKTDTQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTCGRDGEPEPMQKLQDLVNRTPWKKCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLDVAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKSEPEQTGADAAEDEEVDVTSVDPIAAFCSSDEELEDSKALLYLPIAPEVEDPEENPYGPPPDAVQSSLTDEGMGSEKKRQSSSDGPQAPKKKPKTTNIELQGVPNDEVHPLLGVKGDGKSKKKQAGRPKGSKGKDKDSPFKPKLYKGDRGALPLEGAAKGKVQAELGQPLTAGGAISELL
SIO_010081: RBBP5
subclass of: SO_0000673
so part of: RBBP5
location: complement(join(625135..625163,627352..627546,627794..628023,628159..628228,628868..628985,629495..629566,629678..629831,630067..630186,630838..630947,631396..631558,632029..632169,632855..632997))
location: region:625135-632997:-1
so has part: feature:632855-632997:-1:exon
so has part: feature:632029-632169:-1:exon
so has part: feature:631396-631558:-1:exon
so has part: feature:630838-630947:-1:exon
so has part: feature:630067-630186:-1:exon
so has part: feature:629678-629831:-1:exon
so has part: feature:629495-629566:-1:exon
so has part: feature:628868-628985:-1:exon
so has part: feature:628159-628228:-1:exon
so has part: feature:627794-628023:-1:exon
so has part: feature:627352-627546:-1:exon
so has part: feature:625135-625163:-1:exon

XP_030321357.1
type: Protein
SIO_000068: ncbiprotein

position:632997:-1
position: 632997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:632855-632997:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:632029-632169:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:631396-631558:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:630838-630947:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:630067-630186:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:629678-629831:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:629495-629566:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:628868-628985:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:628159-628228:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:627794-628023:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:627352-627546:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:625135-625163:-1:exon

DSTYK
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: DSTYK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(636083..660675)
location: region:636083-660675:-1
so has part: feature:636083-660675:-1:exon
subclass of: SO_0000010

103533687
type: Gene
SIO_000068: ncbigene

position:636083:-1
position: 636083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660675:-1
position: 660675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:636083-660675:-1:exon

DSTYK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: DSTYK
product: dual serine/threonine and tyrosine protein kinase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 4 long SRA reads, 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030465553.1
SIO_010081: DSTYK
subclass of: SO_0000673
so part of: DSTYK
location: complement(join(636083..638527,639479..639613,640153..640267,640769..640882,641077..641209,641856..642012,642311..642440,642710..642886,643984..644067,644460..644734,647008..647671,653204..653589,660251..660675))
location: region:636083-660675:-1
so has part: feature:660251-660675:-1:exon
so has part: feature:653204-653589:-1:exon
so has part: feature:647008-647671:-1:exon
so has part: feature:644460-644734:-1:exon
so has part: feature:643984-644067:-1:exon
so has part: feature:642710-642886:-1:exon
so has part: feature:642311-642440:-1:exon
so has part: feature:641856-642012:-1:exon
so has part: feature:641077-641209:-1:exon
so has part: feature:640769-640882:-1:exon
so has part: feature:640153-640267:-1:exon
so has part: feature:639479-639613:-1:exon
so has part: feature:636083-638527:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:660251-660675:-1:exon

position:660251:-1
position: 660251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:653204-653589:-1:exon

position:653204:-1
position: 653204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:653589:-1
position: 653589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:647008-647671:-1:exon

position:647008:-1
position: 647008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:647671:-1
position: 647671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:644460-644734:-1:exon

position:644460:-1
position: 644460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644734:-1
position: 644734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:643984-644067:-1:exon

position:643984:-1
position: 643984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644067:-1
position: 644067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:642710-642886:-1:exon

position:642710:-1
position: 642710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:642886:-1
position: 642886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:642311-642440:-1:exon

position:642311:-1
position: 642311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:642440:-1
position: 642440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:641856-642012:-1:exon

position:641856:-1
position: 641856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:642012:-1
position: 642012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:641077-641209:-1:exon

position:641077:-1
position: 641077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641209:-1
position: 641209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:640769-640882:-1:exon

position:640769:-1
position: 640769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:640882:-1
position: 640882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:640153-640267:-1:exon

position:640153:-1
position: 640153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:640267:-1
position: 640267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:639479-639613:-1:exon

position:639479:-1
position: 639479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:639613:-1
position: 639613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:636083-638527:-1:exon

position:638527:-1
position: 638527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DSTYK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: DSTYK
product: dual serine/threonine and tyrosine protein kinase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030465554.1
SIO_010081: DSTYK
subclass of: SO_0000673
so part of: DSTYK
location: complement(join(636083..638527,639479..639613,640153..640267,640769..640882,641077..641209,641856..641901,642311..642440,642710..642886,643984..644067,644460..644734,647008..647671,653204..653589,660251..660597))
location: region:636083-660597:-1
so has part: feature:660251-660597:-1:exon
so has part: feature:653204-653589:-1:exon
so has part: feature:647008-647671:-1:exon
so has part: feature:644460-644734:-1:exon
so has part: feature:643984-644067:-1:exon
so has part: feature:642710-642886:-1:exon
so has part: feature:642311-642440:-1:exon
so has part: feature:641856-641901:-1:exon
so has part: feature:641077-641209:-1:exon
so has part: feature:640769-640882:-1:exon
so has part: feature:640153-640267:-1:exon
so has part: feature:639479-639613:-1:exon
so has part: feature:636083-638527:-1:exon

position:660597:-1
position: 660597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660251-660597:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:653204-653589:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:647008-647671:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:644460-644734:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:643984-644067:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:642710-642886:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:642311-642440:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:641856-641901:-1:exon

position:641901:-1
position: 641901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:641077-641209:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:640769-640882:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:640153-640267:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:639479-639613:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:636083-638527:-1:exon

DSTYK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: DSTYK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual serine/threonine and tyrosine protein kinase isoform X2
translation: MEGEGAPAWRGPGGGLVRELCRSFGHYNRHLARLQHNLRETKKFFRDVKYSQGHLFASAAAGEGLPAATGDGDPRDGPCPGGQNFISFPLHEEEHLQRTVSWHPCLLILGQNCNAKCQLLNLLLGEKLLPTPPLRKEENCKRRRIRLTHGTQTRLSLALPEQYELVHMMAAHRGHWDTIPEEDLEIHGDSEDPAHQIAELEVMLPYSLLKEVDVVVAPCRGSQSAEATLREYVNQVLPVVIFAISEAELSSSDEDELREIKEKFSLPIFFFKVPEAGVELISPKKTEHEKSSLYSQLMDLEYLSSNHCSCGGPGPNADAQSMLVEQLEKLRLLSTFSRQVLQKHLVAAATSLNEVHCHCLNIFINQAFDMQRDLQITPKRLEYTRKKENELYESLMNIANRKQEEMKDMIVETLSNMKEELLEDAANMEFKDIIIPENGEPVSSKDIKCCIKQIQELIISRLNQAVANKLISSVDYLRESFVGTLERCLKSLEESWEVSVHPARTLEKSKDASVHITSNYLKQILNAAYHVEVTFHSGSTVTRMLWEQIKQIIQRITWVSPPAITSDWKRKVAQDAIESLSASKLAKSICSQFRTRLNSSHEAFAASLRQLEDGHSGRLEKTEDLWLKVRKDHAPRLARLSLESRSLQDVLLHDEKHWNDLALEFHYMRSLQTHERLVHLHGSVIDYGYGGGSSIAVLLIMERLHRDLYTGLKAGLELETRLQIALDVVEGIRYLHSQGLVHRDIKLKNVLLDKKNRAKITDLGFCKPEAMMSGSIVGTPIHMAPELFTGKYDNSVDVYAFGILFWYICSGHVKLPEAFERCASKDHLWNNVRKGVRPERLPVFDEECWQLMEACWDGDSSQRPLLGIVQPMLQGIMDRLCKSSSEHPSKGLDDST
SIO_010081: DSTYK
subclass of: SO_0000673
so part of: DSTYK
location: complement(join(638340..638527,639479..639613,640153..640267,640769..640882,641077..641209,641856..641901,642311..642440,642710..642886,643984..644067,644460..644734,647008..647671,653204..653589,660251..660494))
location: region:638340-660494:-1
so has part: feature:660251-660494:-1:exon
so has part: feature:653204-653589:-1:exon
so has part: feature:647008-647671:-1:exon
so has part: feature:644460-644734:-1:exon
so has part: feature:643984-644067:-1:exon
so has part: feature:642710-642886:-1:exon
so has part: feature:642311-642440:-1:exon
so has part: feature:641856-641901:-1:exon
so has part: feature:641077-641209:-1:exon
so has part: feature:640769-640882:-1:exon
so has part: feature:640153-640267:-1:exon
so has part: feature:639479-639613:-1:exon
so has part: feature:638340-638527:-1:exon

XP_030321414.1
type: Protein
SIO_000068: ncbiprotein

position:638340:-1
position: 638340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660494:-1
position: 660494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660251-660494:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:653204-653589:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:647008-647671:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:644460-644734:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:643984-644067:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:642710-642886:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:642311-642440:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:641856-641901:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:641077-641209:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:640769-640882:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:640153-640267:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:639479-639613:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:638340-638527:-1:exon

DSTYK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: DSTYK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual serine/threonine and tyrosine protein kinase isoform X1
translation: MEGEGAPAWRGPGGGLVRELCRSFGHYNRHLARLQHNLRETKKFFRDVKYSQGHLFASAAAGEGLPAATGDGDPRDGPCPGGQNFISFPLHEEEHLQRTVSWHPCLLILGQNCNAKCQLLNLLLGEKLLPTPPLRKEENCKRRRIRLTHGTQTRLSLALPEQYELVHMMAAHRGHWDTIPEEDLEIHGDSEDPAHQIAELEVMLPYSLLKEVDVVVAPCRGSQSAEATLREYVNQVLPVVIFAISEAELSSSDEDELREIKEKFSLPIFFFKVPEAGVELISPKKTEHEKSSLYSQLMDLEYLSSNHCSCGGPGPNADAQSMLVEQLEKLRLLSTFSRQVLQKHLVAAATSLNEVHCHCLNIFINQAFDMQRDLQITPKRLEYTRKKENELYESLMNIANRKQEEMKDMIVETLSNMKEELLEDAANMEFKDIIIPENGEPVSSKDIKCCIKQIQELIISRLNQAVANKLISSVDYLRESFVGTLERCLKSLEESWEVSVHPARTLEKSKDASVHITSNYLKQILNAAYHVEVTFHSGSTVTRMLWEQIKQIIQRITWVSPPAITSDWKRKVAQDAIESLSASKLAKSICSQFRTRLNSSHEAFAASLRQLEDGHSGRLEKTEDLWLKVRKDHAPRLARLSLESRSLQDVLLHGKPKLGRELGRGQYGVVYLCDSWGGHFPCALKSVVPPDEKHWNDLALEFHYMRSLQTHERLVHLHGSVIDYGYGGGSSIAVLLIMERLHRDLYTGLKAGLELETRLQIALDVVEGIRYLHSQGLVHRDIKLKNVLLDKKNRAKITDLGFCKPEAMMSGSIVGTPIHMAPELFTGKYDNSVDVYAFGILFWYICSGHVKLPEAFERCASKDHLWNNVRKGVRPERLPVFDEECWQLMEACWDGDSSQRPLLGIVQPMLQGIMDRLCKSSSEHPSKGLDDST
SIO_010081: DSTYK
subclass of: SO_0000673
so part of: DSTYK
location: complement(join(638340..638527,639479..639613,640153..640267,640769..640882,641077..641209,641856..642012,642311..642440,642710..642886,643984..644067,644460..644734,647008..647671,653204..653589,660251..660494))
location: region:638340-660494:-1
so has part: feature:660251-660494:-1:exon
so has part: feature:653204-653589:-1:exon
so has part: feature:647008-647671:-1:exon
so has part: feature:644460-644734:-1:exon
so has part: feature:643984-644067:-1:exon
so has part: feature:642710-642886:-1:exon
so has part: feature:642311-642440:-1:exon
so has part: feature:641856-642012:-1:exon
so has part: feature:641077-641209:-1:exon
so has part: feature:640769-640882:-1:exon
so has part: feature:640153-640267:-1:exon
so has part: feature:639479-639613:-1:exon
so has part: feature:638340-638527:-1:exon

XP_030321413.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:660251-660494:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:653204-653589:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:647008-647671:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:644460-644734:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:643984-644067:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:642710-642886:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:642311-642440:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:641856-642012:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:641077-641209:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:640769-640882:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:640153-640267:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:639479-639613:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:638340-638527:-1:exon

TMCC2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: TMCC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 661479..685083
location: region:661479-685083:1
so has part: feature:661479-685083:1:exon
subclass of: SO_0000010

103533594
type: Gene
SIO_000068: ncbigene

position:661479:1
position: 661479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685083:1
position: 685083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:661479-685083:1:exon

TMCC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TMCC2
product: transmembrane and coiled-coil domain family 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 2 long SRA reads, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_008499485.2
SIO_010081: TMCC2
subclass of: SO_0000673
so part of: TMCC2
location: join(661479..661666,669419..669931,682079..683013,683208..683343,683899..685083)
location: region:661479-685083:1
so has part: feature:661479-661666:1:exon
so has part: feature:669419-669931:1:exon
so has part: feature:682079-683013:1:exon
so has part: feature:683208-683343:1:exon
so has part: feature:683899-685083:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:661479-661666:1:exon

position:661666:1
position: 661666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:669419-669931:1:exon

position:669419:1
position: 669419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:669931:1
position: 669931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:682079-683013:1:exon

position:682079:1
position: 682079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:683013:1
position: 683013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:683208-683343:1:exon

position:683208:1
position: 683208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:683343:1
position: 683343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:683899-685083:1:exon

position:683899:1
position: 683899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMCC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TMCC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and coiled-coil domains protein 2 isoform X1
translation: MKRCRSDELQQPEEDPGAVGEQPGPAAMEAKSGEAAAAPEVGAVPPPRTKPPDLKKIQQLSEGSMFGHGLKHLFHSRRRSREREQHQNSQDPVPPHSHGLSDHDSPDEKERSPEMHRVSYAVSLHDLPARPTAFNRVLQQIRSRPSIKRGTSLHSAGRRAKSGSLEPQKGSPHLLRKAPQDSSLTAILQQHQGRPRSSSTTDTAILLAEGGAVYLLTEDTECLADKLDKGDVTTLSLPTTSGHGDPEGTICLDVPDGTPDPQRTKAAIEHLHQKILKITEQIKIEQEARDDNVAEYLKLANNADKQQASRIKQVFEKKNQKSAQTIAQLHKKLEHYHKKLKEIEQNGPSRQPKDVFRDMHQGLKDVGANVRSSISGFGGGVVEGVKGGLSGLSQATHTAVVSKPREFASLIRNKFGSADNIAHLKDTLDDGHPEEASRALSGSATLVSSPKYGSDDECSSATSGSAGGSNSGAGPGGLGSPKSNTLDSHHYNFDTILEELREIKDSQSHLEDSMEDLKAQLQRDYTYMTQCLQEERYRYERLEEQLNDLTELHQNEMTNLKQELASMEEKVAYQSYERARDIQEAVESCLTRVTKLELQQQQQQVVQLEGVENANARALLGKFINVILALMAVLLVFVSTIANFITPLMKTRMRILSTALLILFLFLLWKHWDSITYFLEHVLLSS
SIO_010081: TMCC2
subclass of: SO_0000673
so part of: TMCC2
location: join(661502..661666,669419..669931,682079..683013,683208..683343,683899..684210)
location: region:661502-684210:1
so has part: feature:661502-661666:1:exon
so has part: feature:669419-669931:1:exon
so has part: feature:682079-683013:1:exon
so has part: feature:683208-683343:1:exon
so has part: feature:683899-684210:1:exon

XP_008497707.2
type: Protein
SIO_000068: ncbiprotein

position:661502:1
position: 661502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:684210:1
position: 684210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:661502-661666:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:669419-669931:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:682079-683013:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:683208-683343:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:683899-684210:1:exon

LOC115599710
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599710
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(666724..672822)
location: region:666724-672822:-1
so has part: feature:666724-672822:-1:exon
subclass of: SO_0000011

115599710
type: Gene
SIO_000068: ncbigene

position:666724:-1
position: 666724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:672822:-1
position: 672822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:666724-672822:-1:exon

LOC115599710
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599710
product: uncharacterized LOC115599710
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003988571.1
SIO_010081: LOC115599710
subclass of: SO_0000673
so part of: LOC115599710
location: complement(join(666724..666906,671323..671446,672554..672822))
location: region:666724-672822:-1
so has part: feature:672554-672822:-1:exon
so has part: feature:671323-671446:-1:exon
so has part: feature:666724-666906:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:672554-672822:-1:exon

position:672554:-1
position: 672554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:671323-671446:-1:exon

position:671323:-1
position: 671323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:671446:-1
position: 671446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:666724-666906:-1:exon

position:666906:-1
position: 666906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMCC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TMCC2
product: transmembrane and coiled-coil domain family 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030465434.1
SIO_010081: TMCC2
subclass of: SO_0000673
so part of: TMCC2
location: join(673070..673143,682079..683013,683208..683343,683899..685083)
location: region:673070-685083:1
so has part: feature:673070-673143:1:exon
so has part: feature:682079-683013:1:exon
so has part: feature:683208-683343:1:exon
so has part: feature:683899-685083:1:exon

position:673070:1
position: 673070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:673070-673143:1:exon

position:673143:1
position: 673143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:682079-683013:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:683208-683343:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:683899-685083:1:exon

TMCC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TMCC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and coiled-coil domains protein 2 isoform X3
translation: MVHVQLDKGDVTTLSLPTTSGHGDPEGTICLDVPDGTPDPQRTKAAIEHLHQKILKITEQIKIEQEARDDNVAEYLKLANNADKQQASRIKQVFEKKNQKSAQTIAQLHKKLEHYHKKLKEIEQNGPSRQPKDVFRDMHQGLKDVGANVRSSISGFGGGVVEGVKGGLSGLSQATHTAVVSKPREFASLIRNKFGSADNIAHLKDTLDDGHPEEASRALSGSATLVSSPKYGSDDECSSATSGSAGGSNSGAGPGGLGSPKSNTLDSHHYNFDTILEELREIKDSQSHLEDSMEDLKAQLQRDYTYMTQCLQEERYRYERLEEQLNDLTELHQNEMTNLKQELASMEEKVAYQSYERARDIQEAVESCLTRVTKLELQQQQQQVVQLEGVENANARALLGKFINVILALMAVLLVFVSTIANFITPLMKTRMRILSTALLILFLFLLWKHWDSITYFLEHVLLSS
SIO_010081: TMCC2
subclass of: SO_0000673
so part of: TMCC2
location: join(673129..673143,682079..683013,683208..683343,683899..684210)
location: region:673129-684210:1
so has part: feature:673129-673143:1:exon
so has part: feature:682079-683013:1:exon
so has part: feature:683208-683343:1:exon
so has part: feature:683899-684210:1:exon

XP_030321294.1
type: Protein
SIO_000068: ncbiprotein

position:673129:1
position: 673129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:673129-673143:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:682079-683013:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:683208-683343:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:683899-684210:1:exon

LOC115599709
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599709
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(677525..693885)
location: region:677525-693885:-1
so has part: feature:677525-693885:-1:exon
subclass of: SO_0000011

115599709
type: Gene
SIO_000068: ncbigene

position:677525:-1
position: 677525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693885:-1
position: 693885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:677525-693885:-1:exon

LOC115599709
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599709
product: uncharacterized LOC115599709
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003988570.1
SIO_010081: LOC115599709
subclass of: SO_0000673
so part of: LOC115599709
location: complement(join(677525..678314,690366..690371,693875..693885))
location: region:677525-693885:-1
so has part: feature:693875-693885:-1:exon
so has part: feature:690366-690371:-1:exon
so has part: feature:677525-678314:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:693875-693885:-1:exon

position:693875:-1
position: 693875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:690366-690371:-1:exon

position:690366:-1
position: 690366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690371:-1
position: 690371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:677525-678314:-1:exon

position:678314:-1
position: 678314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMCC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TMCC2
product: transmembrane and coiled-coil domain family 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 4 long SRA reads, 21 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_030465433.1
SIO_010081: TMCC2
subclass of: SO_0000673
so part of: TMCC2
location: join(678056..678434,682079..683013,683208..683343,683899..685083)
location: region:678056-685083:1
so has part: feature:678056-678434:1:exon
so has part: feature:682079-683013:1:exon
so has part: feature:683208-683343:1:exon
so has part: feature:683899-685083:1:exon

position:678056:1
position: 678056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:678056-678434:1:exon

position:678434:1
position: 678434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:682079-683013:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:683208-683343:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:683899-685083:1:exon

TMCC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TMCC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and coiled-coil domains protein 2 isoform X2
translation: MELDKGDVTTLSLPTTSGHGDPEGTICLDVPDGTPDPQRTKAAIEHLHQKILKITEQIKIEQEARDDNVAEYLKLANNADKQQASRIKQVFEKKNQKSAQTIAQLHKKLEHYHKKLKEIEQNGPSRQPKDVFRDMHQGLKDVGANVRSSISGFGGGVVEGVKGGLSGLSQATHTAVVSKPREFASLIRNKFGSADNIAHLKDTLDDGHPEEASRALSGSATLVSSPKYGSDDECSSATSGSAGGSNSGAGPGGLGSPKSNTLDSHHYNFDTILEELREIKDSQSHLEDSMEDLKAQLQRDYTYMTQCLQEERYRYERLEEQLNDLTELHQNEMTNLKQELASMEEKVAYQSYERARDIQEAVESCLTRVTKLELQQQQQQVVQLEGVENANARALLGKFINVILALMAVLLVFVSTIANFITPLMKTRMRILSTALLILFLFLLWKHWDSITYFLEHVLLSS
SIO_010081: TMCC2
subclass of: SO_0000673
so part of: TMCC2
location: join(678429..678434,682079..683013,683208..683343,683899..684210)
location: region:678429-684210:1
so has part: feature:678429-678434:1:exon
so has part: feature:682079-683013:1:exon
so has part: feature:683208-683343:1:exon
so has part: feature:683899-684210:1:exon

XP_030321293.1
type: Protein
SIO_000068: ncbiprotein

position:678429:1
position: 678429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:678429-678434:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:682079-683013:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:683208-683343:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:683899-684210:1:exon

NUAK2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: NUAK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(694266..706232)
location: region:694266-706232:-1
so has part: feature:694266-706232:-1:exon
subclass of: SO_0000010

103533595
type: Gene
SIO_000068: ncbigene

position:694266:-1
position: 694266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:706232:-1
position: 706232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:694266-706232:-1:exon

NUAK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NUAK2
product: NUAK family kinase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 long SRA read, 13 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_008499486.2
SIO_010081: NUAK2
subclass of: SO_0000673
so part of: NUAK2
location: complement(join(694266..696366,696447..696579,696963..697082,698025..698090,698884..699035,701208..701328,705985..706232))
location: region:694266-706232:-1
so has part: feature:705985-706232:-1:exon
so has part: feature:701208-701328:-1:exon
so has part: feature:698884-699035:-1:exon
so has part: feature:698025-698090:-1:exon
so has part: feature:696963-697082:-1:exon
so has part: feature:696447-696579:-1:exon
so has part: feature:694266-696366:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:705985-706232:-1:exon

position:705985:-1
position: 705985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:701208-701328:-1:exon

position:701208:-1
position: 701208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:701328:-1
position: 701328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:698884-699035:-1:exon

position:698884:-1
position: 698884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:699035:-1
position: 699035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:698025-698090:-1:exon

position:698025:-1
position: 698025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:698090:-1
position: 698090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:696963-697082:-1:exon

position:696963:-1
position: 696963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:697082:-1
position: 697082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:696447-696579:-1:exon

position:696447:-1
position: 696447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:696579:-1
position: 696579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:694266-696366:-1:exon

position:696366:-1
position: 696366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NUAK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NUAK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NUAK family SNF1-like kinase 2 isoform X1
translation: MERAVGIGTATGSGSALATSLAEGLIKSPRPLMKKQAVKRHHHKHNLKHRYEFLETLGKGTYGKVKKARERSGKLVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIAVHEVFENSSKIVIVMEFASRGDLYDYISERQRLSEQEARHFFRQVVSAIYYCHKNGIVHRDLKLENILLDANGNIKIADFGLSNVYQQDKLLQTYCGSPLYASPEIINGRPYKGPEVDSWSLGVLLYILVHGTMPFDGHDYKTLVKQITNGDYREPTKLSDACGLIRWMLMVNPERRATIEDIATHWWVNWGYKVPLGEPELLRETESPMATVAEWLRRSSRPLLENGSKVRCFLKQHIPGVTLERQRSLKKSKKENDISQVLQEVALAPENPSKSILKRPKGILKKRNSCEQKMPSPGPPPAVPVGEERGEDGAVAALGLPQVLSPRILPRSAGAGAVPTAVPKKGILKKPPARESGYYSSLECCESGDVLDAGSLDLDGSVFPDPPSPEQGPQGLPARRKGILKHNSKYSSSTTEPENPPGQGLGGLGGFGEVTLPQVPRARPSSAVSEDSILSTESFDQLDLPTRVPHGGGGMRGCVSADSLLRLEEEEEVEEGRRLRRWTVTHCRSPLAESSLSLAGCDNVTEVYQRAMAIGMKLS
SIO_010081: NUAK2
subclass of: SO_0000673
so part of: NUAK2
location: complement(join(695225..696366,696447..696579,696963..697082,698025..698090,698884..699035,701208..701328,705985..706209))
location: region:695225-706209:-1
so has part: feature:705985-706209:-1:exon
so has part: feature:701208-701328:-1:exon
so has part: feature:698884-699035:-1:exon
so has part: feature:698025-698090:-1:exon
so has part: feature:696963-697082:-1:exon
so has part: feature:696447-696579:-1:exon
so has part: feature:695225-696366:-1:exon

XP_008497708.2
type: Protein
SIO_000068: ncbiprotein

position:695225:-1
position: 695225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:706209:-1
position: 706209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:705985-706209:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701208-701328:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:698884-699035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:698025-698090:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:696963-697082:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:696447-696579:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:695225-696366:-1:exon

NUAK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NUAK2
product: NUAK family kinase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030465652.1
SIO_010081: NUAK2
subclass of: SO_0000673
so part of: NUAK2
location: complement(join(695618..695904,695979..696366,696447..696579,696963..697082,698025..698090,698884..699035,701208..701328,705985..706228))
location: region:695618-706228:-1
so has part: feature:705985-706228:-1:exon
so has part: feature:701208-701328:-1:exon
so has part: feature:698884-699035:-1:exon
so has part: feature:698025-698090:-1:exon
so has part: feature:696963-697082:-1:exon
so has part: feature:696447-696579:-1:exon
so has part: feature:695979-696366:-1:exon
so has part: feature:695618-695904:-1:exon

position:695618:-1
position: 695618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:706228:-1
position: 706228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:705985-706228:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701208-701328:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:698884-699035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:698025-698090:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:696963-697082:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:696447-696579:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:695979-696366:-1:exon

position:695979:-1
position: 695979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:695618-695904:-1:exon

position:695904:-1
position: 695904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NUAK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NUAK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NUAK family SNF1-like kinase 2 isoform X2
translation: MERAVGIGTATGSGSALATSLAEGLIKSPRPLMKKQAVKRHHHKHNLKHRYEFLETLGKGTYGKVKKARERSGKLVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIAVHEVFENSSKIVIVMEFASRGDLYDYISERQRLSEQEARHFFRQVVSAIYYCHKNGIVHRDLKLENILLDANGNIKIADFGLSNVYQQDKLLQTYCGSPLYASPEIINGRPYKGPEVDSWSLGVLLYILVHGTMPFDGHDYKTLVKQITNGDYREPTKLSDACGLIRWMLMVNPERRATIEDIATHWWVNWGYKVPLGEPELLRETESPMATVAEWLRRSSRPLLENGSKVRCFLKQHIPGVTLERQRSLKKSKKENDISQVLQEVALAPENPSKSILKRPKGILKKRNSCGCSGSPPGPVPQDFASQCRCWSRAHGCAQEGNPEKAPSEGVRVLLIPGMLRIRGCPGRGELGP
SIO_010081: NUAK2
subclass of: SO_0000673
so part of: NUAK2
location: complement(join(695709..695904,695979..696366,696447..696579,696963..697082,698025..698090,698884..699035,701208..701328,705985..706209))
location: region:695709-706209:-1
so has part: feature:705985-706209:-1:exon
so has part: feature:701208-701328:-1:exon
so has part: feature:698884-699035:-1:exon
so has part: feature:698025-698090:-1:exon
so has part: feature:696963-697082:-1:exon
so has part: feature:696447-696579:-1:exon
so has part: feature:695979-696366:-1:exon
so has part: feature:695709-695904:-1:exon

XP_030321512.1
type: Protein
SIO_000068: ncbiprotein

position:695709:-1
position: 695709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:705985-706209:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701208-701328:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:698884-699035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:698025-698090:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:696963-697082:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:696447-696579:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:695979-696366:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:695709-695904:-1:exon

KLHDC8A
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: KLHDC8A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(716130..726741)
location: region:716130-726741:-1
so has part: feature:716130-726741:-1:exon
subclass of: SO_0000010

103533596
type: Gene
SIO_000068: ncbigene

position:716130:-1
position: 716130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:726741:-1
position: 726741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:716130-726741:-1:exon

KLHDC8A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: KLHDC8A
product: kelch domain containing 8A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 long SRA reads, 15 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_008499487.2
SIO_010081: KLHDC8A
subclass of: SO_0000673
so part of: KLHDC8A
location: complement(join(716130..717251,717451..717552,717916..718131,719177..719341,720493..720925,721077..721143,726335..726741))
location: region:716130-726741:-1
so has part: feature:726335-726741:-1:exon
so has part: feature:721077-721143:-1:exon
so has part: feature:720493-720925:-1:exon
so has part: feature:719177-719341:-1:exon
so has part: feature:717916-718131:-1:exon
so has part: feature:717451-717552:-1:exon
so has part: feature:716130-717251:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:726335-726741:-1:exon

position:726335:-1
position: 726335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:721077-721143:-1:exon

position:721077:-1
position: 721077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:721143:-1
position: 721143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:720493-720925:-1:exon

position:720493:-1
position: 720493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:720925:-1
position: 720925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:719177-719341:-1:exon

position:719177:-1
position: 719177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719341:-1
position: 719341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:717916-718131:-1:exon

position:717916:-1
position: 717916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718131:-1
position: 718131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:717451-717552:-1:exon

position:717451:-1
position: 717451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717552:-1
position: 717552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:716130-717251:-1:exon

position:717251:-1
position: 717251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KLHDC8A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: KLHDC8A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch domain-containing protein 8A
translation: MELANTKDFQWKTLTPLPSPRVYSTLVESAGQVFAIGGCDDNGVPMDCFEVYSPEADQWTALPAMPTARAGVAVATLGKRIMVIGGVGVNQMPLKIVEMYNTDEGKWKKRNSLREAAMGISVTTKDYRVYAAGGMGSDLRPHNYLQHYDMLKDIWVSLAAMPTPRYAATSFLRGTKIYVLGGRQAKYAINAFEVFDTETRSWTKFPNIPNKRAFSSFVPTEDKFFSLGGLRQGRLYRQPKFMRTVDMFDIEQGSWLKMERSSYLKKRRADFVAGYLKGRVVVAGGLGNQPTVLESAEAFHPEKNKWETLPPMPTPRCACSSIVVQNCLLAVGGVSQGLSSAVEALCLNDS
SIO_010081: KLHDC8A
subclass of: SO_0000673
so part of: KLHDC8A
location: complement(join(717058..717251,717451..717552,717916..718131,719177..719341,720493..720868))
location: region:717058-720868:-1
so has part: feature:720493-720868:-1:exon
so has part: feature:719177-719341:-1:exon
so has part: feature:717916-718131:-1:exon
so has part: feature:717451-717552:-1:exon
so has part: feature:717058-717251:-1:exon

XP_008497709.1
type: Protein
SIO_000068: ncbiprotein

position:717058:-1
position: 717058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:720868:-1
position: 720868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:720493-720868:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:719177-719341:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:717916-718131:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:717451-717552:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:717058-717251:-1:exon

LOC115599731
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599731
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1043159..1131831)
location: region:1043159-1131831:-1
so has part: feature:1043159-1131831:-1:exon
subclass of: SO_0000011

115599731
type: Gene
SIO_000068: ncbigene

position:1043159:-1
position: 1043159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1131831:-1
position: 1131831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1043159-1131831:-1:exon

LOC115599731
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599731
product: uncharacterized LOC115599731
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988600.1
SIO_010081: LOC115599731
subclass of: SO_0000673
so part of: LOC115599731
location: complement(join(1043159..1043628,1044069..1044111,1131394..1131831))
location: region:1043159-1131831:-1
so has part: feature:1131394-1131831:-1:exon
so has part: feature:1044069-1044111:-1:exon
so has part: feature:1043159-1043628:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1131394-1131831:-1:exon

position:1131394:-1
position: 1131394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1044069-1044111:-1:exon

position:1044069:-1
position: 1044069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1044111:-1
position: 1044111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1043159-1043628:-1:exon

position:1043628:-1
position: 1043628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NGF
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: NGF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1084226..1088317
location: region:1084226-1088317:1
so has part: feature:1084226-1088317:1:exon
subclass of: SO_0000010

103525579
type: Gene
SIO_000068: ncbigene

position:1084226:1
position: 1084226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1088317:1
position: 1088317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1084226-1088317:1:exon

NGF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NGF
product: nerve growth factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_008490540.2
SIO_010081: NGF
subclass of: SO_0000673
so part of: NGF
location: join(1084226..1084360,1087457..1088317)
location: region:1084226-1088317:1
so has part: feature:1084226-1084360:1:exon
so has part: feature:1087457-1088317:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1084226-1084360:1:exon

position:1084360:1
position: 1084360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1087457-1088317:1:exon

position:1087457:1
position: 1087457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NGF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NGF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-nerve growth factor
translation: MSMLYYTLIIAFLIGTRAAPKSEDNAPLEYPTERSLLNFHQSNRHHIPKVAPQTSHSNTTWTRSGREAINITMDPKIFKKRHFRSPRVLFSTQPPPVSGQGQNVEFLSSAGSLNRTARTKRTAHPVLHRGEFSVCDSVSMWVGDKTTATDIKGKEVTVLGEVNVNNNIFKQYFFETKCRDPKPVASGCRGIDAKHWNSYCTTTHTFVKALTMEGKQAAWRFIRIDTACVCVLSRKSGRP
SIO_010081: NGF
subclass of: SO_0000673
so part of: NGF
location: 1087469..1088188
location: region:1087469-1088188:1
so has part: feature:1087469-1088188:1:exon

XP_008488762.1
type: Protein
SIO_000068: ncbiprotein

position:1087469:1
position: 1087469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1088188:1
position: 1088188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1087469-1088188:1:exon

TSPAN2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: TSPAN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1110442..1127244
location: region:1110442-1127244:1
so has part: feature:1110442-1127244:1:exon
subclass of: SO_0000010

103525580
type: Gene
SIO_000068: ncbigene

position:1110442:1
position: 1110442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1127244:1
position: 1127244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1110442-1127244:1:exon

TSPAN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TSPAN2
product: tetraspanin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030465669.1
SIO_010081: TSPAN2
subclass of: SO_0000673
so part of: TSPAN2
location: join(1110442..1110575,1112070..1112172,1121465..1121562,1122013..1122087,1122639..1122740,1123884..1123955,1124669..1124752,1126839..1127244)
location: region:1110442-1127244:1
so has part: feature:1110442-1110575:1:exon
so has part: feature:1112070-1112172:1:exon
so has part: feature:1121465-1121562:1:exon
so has part: feature:1122013-1122087:1:exon
so has part: feature:1122639-1122740:1:exon
so has part: feature:1123884-1123955:1:exon
so has part: feature:1124669-1124752:1:exon
so has part: feature:1126839-1127244:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1110442-1110575:1:exon

position:1110575:1
position: 1110575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1112070-1112172:1:exon

position:1112070:1
position: 1112070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1112172:1
position: 1112172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1121465-1121562:1:exon

position:1121465:1
position: 1121465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1121562:1
position: 1121562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1122013-1122087:1:exon

position:1122013:1
position: 1122013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1122087:1
position: 1122087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1122639-1122740:1:exon

position:1122639:1
position: 1122639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1122740:1
position: 1122740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1123884-1123955:1:exon

position:1123884:1
position: 1123884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1123955:1
position: 1123955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1124669-1124752:1:exon

position:1124669:1
position: 1124669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1124752:1
position: 1124752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1126839-1127244:1:exon

position:1126839:1
position: 1126839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TSPAN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TSPAN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-2
translation: MGTVYEGMRCIKILLFIFNLTFWLAGLAVIAFGLWLRFGGVMADFASDKRSPEYFFMGLYVLVGAGALMTTVGFFGCCGAARESQCLLGAFFACLLVIFAAEVTAGVFAFIGKKMAIQEAQKIYEDIYDDYMKNPGGKVNMTIYHYHLALKCCGKDNIEQVGLPCPENIQMPKNCLVEIHNVIDANLHLVGIVGIAIAAITIFGMIFSMVLCCVIRSTRDMI
SIO_010081: TSPAN2
subclass of: SO_0000673
so part of: TSPAN2
location: join(1110507..1110575,1112070..1112172,1121465..1121562,1122013..1122087,1122639..1122740,1123884..1123955,1124669..1124752,1126839..1126904)
location: region:1110507-1126904:1
so has part: feature:1110507-1110575:1:exon
so has part: feature:1112070-1112172:1:exon
so has part: feature:1121465-1121562:1:exon
so has part: feature:1122013-1122087:1:exon
so has part: feature:1122639-1122740:1:exon
so has part: feature:1123884-1123955:1:exon
so has part: feature:1124669-1124752:1:exon
so has part: feature:1126839-1126904:1:exon

XP_030321529.1
type: Protein
SIO_000068: ncbiprotein

position:1110507:1
position: 1110507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1126904:1
position: 1126904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1110507-1110575:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1112070-1112172:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1121465-1121562:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1122013-1122087:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1122639-1122740:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1123884-1123955:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1124669-1124752:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1126839-1126904:1:exon

TSHB
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: TSHB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1132344..1134534)
location: region:1132344-1134534:-1
so has part: feature:1132344-1134534:-1:exon
subclass of: SO_0000010

103525581
type: Gene
SIO_000068: ncbigene

position:1132344:-1
position: 1132344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1134534:-1
position: 1134534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1132344-1134534:-1:exon

TSHB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TSHB
product: thyroid stimulating hormone subunit beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 18 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008490542.2
SIO_010081: TSHB
subclass of: SO_0000673
so part of: TSHB
location: complement(join(1132344..1132670,1133426..1133588,1134424..1134534))
location: region:1132344-1134534:-1
so has part: feature:1134424-1134534:-1:exon
so has part: feature:1133426-1133588:-1:exon
so has part: feature:1132344-1132670:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1134424-1134534:-1:exon

position:1134424:-1
position: 1134424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1133426-1133588:-1:exon

position:1133426:-1
position: 1133426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1133588:-1
position: 1133588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1132344-1132670:-1:exon

position:1132670:-1
position: 1132670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TSHB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TSHB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thyrotropin subunit beta
translation: MSLFFAMSLLFGLTFGQTASLCAPSEYTIHVEKRECAYCLVINTTICAGFCMTRDSNGKKLLLKSALSQNVCTYKEMLYQTALIPGCPHHTIPYYSYPVALSCKCGKCNTDYSDCVHEKVRTNYCTKPQKICNM
SIO_010081: TSHB
subclass of: SO_0000673
so part of: TSHB
location: complement(join(1132428..1132670,1133426..1133587))
location: region:1132428-1133587:-1
so has part: feature:1133426-1133587:-1:exon
so has part: feature:1132428-1132670:-1:exon

XP_008488764.1
type: Protein
SIO_000068: ncbiprotein

position:1132428:-1
position: 1132428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1133587:-1
position: 1133587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1133426-1133587:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1132428-1132670:-1:exon

SYCP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SYCP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1141128..1161274)
location: region:1141128-1161274:-1
so has part: feature:1141128-1161274:-1:exon
subclass of: SO_0000010

103525582
type: Gene
SIO_000068: ncbigene

position:1141128:-1
position: 1141128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1161274:-1
position: 1161274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1141128-1161274:-1:exon

SYCP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SYCP1
product: synaptonemal complex protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 53% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008490543.2
SIO_010081: SYCP1
subclass of: SO_0000673
so part of: SYCP1
location: complement(join(1141128..1141391,1141474..1141560,1141944..1142087,1142916..1143095,1143232..1143291,1143987..1144061,1145024..1145116,1145790..1145900,1146503..1146619,1147638..1147700,1148167..1148229,1149107..1149169,1149597..1149674,1150273..1150347,1150586..1150703,1150919..1151022,1151912..1152016,1153064..1153125,1153931..1153998,1154911..1155095,1155230..1155324,1155897..1156005,1156180..1156253,1156875..1156944,1157084..1157142,1157521..1157594,1157803..1157870,1158665..1158829,1159891..1159937,1160101..1160179,1161146..1161274))
location: region:1141128-1161274:-1
so has part: feature:1161146-1161274:-1:exon
so has part: feature:1160101-1160179:-1:exon
so has part: feature:1159891-1159937:-1:exon
so has part: feature:1158665-1158829:-1:exon
so has part: feature:1157803-1157870:-1:exon
so has part: feature:1157521-1157594:-1:exon
so has part: feature:1157084-1157142:-1:exon
so has part: feature:1156875-1156944:-1:exon
so has part: feature:1156180-1156253:-1:exon
so has part: feature:1155897-1156005:-1:exon
so has part: feature:1155230-1155324:-1:exon
so has part: feature:1154911-1155095:-1:exon
so has part: feature:1153931-1153998:-1:exon
so has part: feature:1153064-1153125:-1:exon
so has part: feature:1151912-1152016:-1:exon
so has part: feature:1150919-1151022:-1:exon
so has part: feature:1150586-1150703:-1:exon
so has part: feature:1150273-1150347:-1:exon
so has part: feature:1149597-1149674:-1:exon
so has part: feature:1149107-1149169:-1:exon
so has part: feature:1148167-1148229:-1:exon
so has part: feature:1147638-1147700:-1:exon
so has part: feature:1146503-1146619:-1:exon
so has part: feature:1145790-1145900:-1:exon
so has part: feature:1145024-1145116:-1:exon
so has part: feature:1143987-1144061:-1:exon
so has part: feature:1143232-1143291:-1:exon
so has part: feature:1142916-1143095:-1:exon
so has part: feature:1141944-1142087:-1:exon
so has part: feature:1141474-1141560:-1:exon
so has part: feature:1141128-1141391:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1161146-1161274:-1:exon

position:1161146:-1
position: 1161146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1160101-1160179:-1:exon

position:1160101:-1
position: 1160101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1160179:-1
position: 1160179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1159891-1159937:-1:exon

position:1159891:-1
position: 1159891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1159937:-1
position: 1159937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1158665-1158829:-1:exon

position:1158665:-1
position: 1158665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1158829:-1
position: 1158829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1157803-1157870:-1:exon

position:1157803:-1
position: 1157803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1157870:-1
position: 1157870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1157521-1157594:-1:exon

position:1157521:-1
position: 1157521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1157594:-1
position: 1157594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1157084-1157142:-1:exon

position:1157084:-1
position: 1157084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1157142:-1
position: 1157142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1156875-1156944:-1:exon

position:1156875:-1
position: 1156875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1156944:-1
position: 1156944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1156180-1156253:-1:exon

position:1156180:-1
position: 1156180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1156253:-1
position: 1156253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1155897-1156005:-1:exon

position:1155897:-1
position: 1155897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1156005:-1
position: 1156005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1155230-1155324:-1:exon

position:1155230:-1
position: 1155230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1155324:-1
position: 1155324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1154911-1155095:-1:exon

position:1154911:-1
position: 1154911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1155095:-1
position: 1155095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1153931-1153998:-1:exon

position:1153931:-1
position: 1153931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1153998:-1
position: 1153998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1153064-1153125:-1:exon

position:1153064:-1
position: 1153064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1153125:-1
position: 1153125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1151912-1152016:-1:exon

position:1151912:-1
position: 1151912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1152016:-1
position: 1152016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1150919-1151022:-1:exon

position:1150919:-1
position: 1150919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1151022:-1
position: 1151022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1150586-1150703:-1:exon

position:1150586:-1
position: 1150586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1150703:-1
position: 1150703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1150273-1150347:-1:exon

position:1150273:-1
position: 1150273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1150347:-1
position: 1150347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1149597-1149674:-1:exon

position:1149597:-1
position: 1149597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1149674:-1
position: 1149674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1149107-1149169:-1:exon

position:1149107:-1
position: 1149107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1149169:-1
position: 1149169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1148167-1148229:-1:exon

position:1148167:-1
position: 1148167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1148229:-1
position: 1148229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1147638-1147700:-1:exon

position:1147638:-1
position: 1147638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1147700:-1
position: 1147700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1146503-1146619:-1:exon

position:1146503:-1
position: 1146503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1146619:-1
position: 1146619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1145790-1145900:-1:exon

position:1145790:-1
position: 1145790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1145900:-1
position: 1145900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1145024-1145116:-1:exon

position:1145024:-1
position: 1145024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1145116:-1
position: 1145116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1143987-1144061:-1:exon

position:1143987:-1
position: 1143987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1144061:-1
position: 1144061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1143232-1143291:-1:exon

position:1143232:-1
position: 1143232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1143291:-1
position: 1143291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1142916-1143095:-1:exon

position:1142916:-1
position: 1142916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1143095:-1
position: 1143095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1141944-1142087:-1:exon

position:1141944:-1
position: 1141944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1142087:-1
position: 1142087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1141474-1141560:-1:exon

position:1141474:-1
position: 1141474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1141560:-1
position: 1141560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1141128-1141391:-1:exon

position:1141391:-1
position: 1141391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SYCP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SYCP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptonemal complex protein 1
translation: MEKEKPFKLFVPPRLSGGQVSAVKPQTSTRATGLCQGFNRCPDDDFNLPFVMASNHGEITDSDAISQQVKLCSEVDEETIETMNELYAKLYKEAEKIKLWKLTVESELKQKERKLQENGKIIEAQRKAIQELQFENEKLSLKLEDEICENKDLLKENSASRHLCNLLKETCSHFTEKSTKYEHEREETRQLYVELNNSVERMIMAFEELRVQAENTRLEMCFRLKEEAEKVDKFEKECKLEVSMKEKQISVLTIQNDEKDNLIQDIKTQLHESRNKIADLEEARRHEGEMLKESKINQEYLRSELEDAKLSLQKKEVTQKVLETELQNSVKALTQVTEEKEAHVEECEKIKLLHASVREELEASISNLKSLLQKEQTRLEKYEDESKLLALELRNKSAELEEMNKLKCDKEMQLEEMSETLGKVEGLLTKKKDLEATVESLQEREEEMKNVLQMREKEINDLKVQLSSAVEKEQSYIKELTTLNRDLEREAQKNGQLTVYIDKLLLEKEQIVQEKSGMATQLKKLQAINEDSRKKEENTKQLVERLEEANDHLRQELESLKEKMAKKGEEIKSKLDETEENAKSVENEMSRKEKQLKNLENKFNNLKKQMENKIKCIEELQQENKVLKKKITAESKKASIYEGKVNKLQLEMENMNKQHKEVVDSYQKEIETKEVNENKLLEEVEKMRLLADEATVIQRETDIRCQHKITEMVALMEKHKHEYDKMVEEKDTELKLYKIKEQEQILSKRSMESELLCLKSELSSLKEQLKAEIEEKENLAKKYASNMVPENEKKHKKIQTHFSETPKLDTHLDCASINVKSRKSHTDTPTGVNIVEKKKITPSVSAKSPLGSPPLKTYIIKTPPVHKLQSESTNLHAEQCMRKKQKVFLRLDAQSDSSEHSDLLSIVSEEEMFKTLYKDYPQASHLCGMTPKKKPATLNLKTPGSVLKLTTMRKMREAGWTAVSKMDRKRKMKEAEKLFN
SIO_010081: SYCP1
subclass of: SO_0000673
so part of: SYCP1
location: complement(join(1141248..1141391,1141474..1141560,1141944..1142087,1142916..1143095,1143232..1143291,1143987..1144061,1145024..1145116,1145790..1145900,1146503..1146619,1147638..1147700,1148167..1148229,1149107..1149169,1149597..1149674,1150273..1150347,1150586..1150703,1150919..1151022,1151912..1152016,1153064..1153125,1153931..1153998,1154911..1155095,1155230..1155324,1155897..1156005,1156180..1156253,1156875..1156944,1157084..1157142,1157521..1157594,1157803..1157870,1158665..1158829,1159891..1159937,1160101..1160179,1161146..1161253))
location: region:1141248-1161253:-1
so has part: feature:1161146-1161253:-1:exon
so has part: feature:1160101-1160179:-1:exon
so has part: feature:1159891-1159937:-1:exon
so has part: feature:1158665-1158829:-1:exon
so has part: feature:1157803-1157870:-1:exon
so has part: feature:1157521-1157594:-1:exon
so has part: feature:1157084-1157142:-1:exon
so has part: feature:1156875-1156944:-1:exon
so has part: feature:1156180-1156253:-1:exon
so has part: feature:1155897-1156005:-1:exon
so has part: feature:1155230-1155324:-1:exon
so has part: feature:1154911-1155095:-1:exon
so has part: feature:1153931-1153998:-1:exon
so has part: feature:1153064-1153125:-1:exon
so has part: feature:1151912-1152016:-1:exon
so has part: feature:1150919-1151022:-1:exon
so has part: feature:1150586-1150703:-1:exon
so has part: feature:1150273-1150347:-1:exon
so has part: feature:1149597-1149674:-1:exon
so has part: feature:1149107-1149169:-1:exon
so has part: feature:1148167-1148229:-1:exon
so has part: feature:1147638-1147700:-1:exon
so has part: feature:1146503-1146619:-1:exon
so has part: feature:1145790-1145900:-1:exon
so has part: feature:1145024-1145116:-1:exon
so has part: feature:1143987-1144061:-1:exon
so has part: feature:1143232-1143291:-1:exon
so has part: feature:1142916-1143095:-1:exon
so has part: feature:1141944-1142087:-1:exon
so has part: feature:1141474-1141560:-1:exon
so has part: feature:1141248-1141391:-1:exon

XP_008488765.2
type: Protein
SIO_000068: ncbiprotein

position:1141248:-1
position: 1141248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1161253:-1
position: 1161253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1161146-1161253:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1160101-1160179:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1159891-1159937:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1158665-1158829:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1157803-1157870:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1157521-1157594:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1157084-1157142:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1156875-1156944:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1156180-1156253:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1155897-1156005:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1155230-1155324:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1154911-1155095:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1153931-1153998:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1153064-1153125:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1151912-1152016:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1150919-1151022:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1150586-1150703:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1150273-1150347:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1149597-1149674:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1149107-1149169:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1148167-1148229:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1147638-1147700:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1146503-1146619:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1145790-1145900:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1145024-1145116:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1143987-1144061:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1143232-1143291:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1142916-1143095:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1141944-1142087:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1141474-1141560:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1141248-1141391:-1:exon

LOC103525583
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103525583
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1161414..1172718)
location: region:1161414-1172718:-1
so has part: feature:1161414-1172718:-1:exon
subclass of: SO_0000010

103525583
type: Gene
SIO_000068: ncbigene

position:1161414:-1
position: 1161414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1172718:-1
position: 1172718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1161414-1172718:-1:exon

LOC103525583
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103525583
product: bile acid receptor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030465560.1
SIO_010081: LOC103525583
subclass of: SO_0000673
so part of: LOC103525583
location: complement(join(1161414..1161664,1161777..1161890,1162860..1162988,1164122..1164221,1164316..1164420,1164510..1164649,1166416..1166556,1167001..1167360,1168128..1168254,1172481..1172718))
location: region:1161414-1172718:-1
so has part: feature:1172481-1172718:-1:exon
so has part: feature:1168128-1168254:-1:exon
so has part: feature:1167001-1167360:-1:exon
so has part: feature:1166416-1166556:-1:exon
so has part: feature:1164510-1164649:-1:exon
so has part: feature:1164316-1164420:-1:exon
so has part: feature:1164122-1164221:-1:exon
so has part: feature:1162860-1162988:-1:exon
so has part: feature:1161777-1161890:-1:exon
so has part: feature:1161414-1161664:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1172481-1172718:-1:exon

position:1172481:-1
position: 1172481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1168128-1168254:-1:exon

position:1168128:-1
position: 1168128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1168254:-1
position: 1168254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1167001-1167360:-1:exon

position:1167001:-1
position: 1167001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1167360:-1
position: 1167360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1166416-1166556:-1:exon

position:1166416:-1
position: 1166416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1166556:-1
position: 1166556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1164510-1164649:-1:exon

position:1164510:-1
position: 1164510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1164649:-1
position: 1164649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1164316-1164420:-1:exon

position:1164316:-1
position: 1164316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1164420:-1
position: 1164420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1164122-1164221:-1:exon

position:1164122:-1
position: 1164122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1164221:-1
position: 1164221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1162860-1162988:-1:exon

position:1162860:-1
position: 1162860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1162988:-1
position: 1162988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1161777-1161890:-1:exon

position:1161777:-1
position: 1161777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1161890:-1
position: 1161890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1161414-1161664:-1:exon

position:1161664:-1
position: 1161664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103525583
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103525583
product: bile acid receptor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_008490544.2
SIO_010081: LOC103525583
subclass of: SO_0000673
so part of: LOC103525583
location: complement(join(1161414..1161664,1161777..1161890,1162279..1162392,1162860..1162988,1164122..1164221,1164316..1164420,1164510..1164649,1166416..1166556,1167001..1167360,1168128..1168254,1172481..1172718))
location: region:1161414-1172718:-1
so has part: feature:1172481-1172718:-1:exon
so has part: feature:1168128-1168254:-1:exon
so has part: feature:1167001-1167360:-1:exon
so has part: feature:1166416-1166556:-1:exon
so has part: feature:1164510-1164649:-1:exon
so has part: feature:1164316-1164420:-1:exon
so has part: feature:1164122-1164221:-1:exon
so has part: feature:1162860-1162988:-1:exon
so has part: feature:1162279-1162392:-1:exon
so has part: feature:1161777-1161890:-1:exon
so has part: feature:1161414-1161664:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1172481-1172718:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1168128-1168254:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1167001-1167360:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1166416-1166556:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1164510-1164649:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1164316-1164420:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1164122-1164221:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1162860-1162988:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1162279-1162392:-1:exon

position:1162279:-1
position: 1162279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1162392:-1
position: 1162392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1161777-1161890:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1161414-1161664:-1:exon

LOC103525583
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103525583
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bile acid receptor isoform X2
translation: MANAFVTVPDGYCLPEPIQYYDVLPEHISYEVQDTDFQAGPYCQYSPAPIPPPVLQPPQSQYTTYSLDPLYSEGPCSSSSCELSKPPFLAAHTGDDGYQGLKRPRLNHSSLKLKGQEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYLCKNGGHCEMDMYMRRKCQECRLKKCKAVGMLAECLLTEVQCKSKRLRKNFKQKSSFLCNIKLEDEGLNSKHVSSTTRSGKILEKLELTPREHQLLDHIVAAHQKYTIPLEEARKFLQETASPEESFLHLSETAVIHVQVLVDFTKRLPGFESLASEDQLALLKGSTVEAMFLRSAQMYNQRISEYQPSTSESITEEFITALFYFYRSMGELKVTETEYALLVATTVFFSDRPLLRNKRHVEELQEPLLGILYKYSKIYHPEDPQHFARLIGRLTELRTLNHTHAEVLVTWRTKDPRLTSLLCEIWDLH
SIO_010081: LOC103525583
subclass of: SO_0000673
so part of: LOC103525583
location: complement(join(1161426..1161664,1161777..1161890,1162860..1162988,1164122..1164221,1164316..1164420,1164510..1164649,1166416..1166556,1167001..1167360,1168128..1168191))
location: region:1161426-1168191:-1
so has part: feature:1168128-1168191:-1:exon
so has part: feature:1167001-1167360:-1:exon
so has part: feature:1166416-1166556:-1:exon
so has part: feature:1164510-1164649:-1:exon
so has part: feature:1164316-1164420:-1:exon
so has part: feature:1164122-1164221:-1:exon
so has part: feature:1162860-1162988:-1:exon
so has part: feature:1161777-1161890:-1:exon
so has part: feature:1161426-1161664:-1:exon

XP_030321420.1
type: Protein
SIO_000068: ncbiprotein

position:1161426:-1
position: 1161426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1168191:-1
position: 1168191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1168128-1168191:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1167001-1167360:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1166416-1166556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1164510-1164649:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1164316-1164420:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1164122-1164221:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1162860-1162988:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1161777-1161890:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1161426-1161664:-1:exon

LOC103525583
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103525583
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bile acid receptor isoform X1
translation: MANAFVTVPDGYCLPEPIQYYDVLPEHISYEVQDTDFQAGPYCQYSPAPIPPPVLQPPQSQYTTYSLDPLYSEGPCSSSSCELSKPPFLAAHTGDDGYQGLKRPRLNHSSLKLKGQEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYLCKNGGHCEMDMYMRRKCQECRLKKCKAVGMLAECLLTEVQCKSKRLRKNFKQKSSFLCNIKLEDEGLNSKHVSSTTRSGKILEKLELTPREHQLLDHIVAAHQKYTIPLEEARKFLQETASPEESFLHLSETAVIHVQVLVDFTKRLPGFESLASEDQLALLKGSTVEAMFLRSAQMYNQRISEYQPSTSESQVRLSDHGTCYVQNVDKNIYSMEMSHNEESPTSTTTSGITEEFITALFYFYRSMGELKVTETEYALLVATTVFFSDRPLLRNKRHVEELQEPLLGILYKYSKIYHPEDPQHFARLIGRLTELRTLNHTHAEVLVTWRTKDPRLTSLLCEIWDLH
SIO_010081: LOC103525583
subclass of: SO_0000673
so part of: LOC103525583
location: complement(join(1161426..1161664,1161777..1161890,1162279..1162392,1162860..1162988,1164122..1164221,1164316..1164420,1164510..1164649,1166416..1166556,1167001..1167360,1168128..1168191))
location: region:1161426-1168191:-1
so has part: feature:1168128-1168191:-1:exon
so has part: feature:1167001-1167360:-1:exon
so has part: feature:1166416-1166556:-1:exon
so has part: feature:1164510-1164649:-1:exon
so has part: feature:1164316-1164420:-1:exon
so has part: feature:1164122-1164221:-1:exon
so has part: feature:1162860-1162988:-1:exon
so has part: feature:1162279-1162392:-1:exon
so has part: feature:1161777-1161890:-1:exon
so has part: feature:1161426-1161664:-1:exon

XP_008488766.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1168128-1168191:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1167001-1167360:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1166416-1166556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1164510-1164649:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1164316-1164420:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1164122-1164221:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1162860-1162988:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1162279-1162392:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1161777-1161890:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1161426-1161664:-1:exon

SIKE1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SIKE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1179380..1183227
location: region:1179380-1183227:1
so has part: feature:1179380-1183227:1:exon
subclass of: SO_0000010

103525605
type: Gene
SIO_000068: ncbigene

position:1179380:1
position: 1179380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1183227:1
position: 1183227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1179380-1183227:1:exon

SIKE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SIKE1
product: suppressor of IKBKE 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030465565.1
SIO_010081: SIKE1
subclass of: SO_0000673
so part of: SIKE1
location: join(1179380..1179906,1180367..1180509,1181302..1181415,1181821..1183227)
location: region:1179380-1183227:1
so has part: feature:1179380-1179906:1:exon
so has part: feature:1180367-1180509:1:exon
so has part: feature:1181302-1181415:1:exon
so has part: feature:1181821-1183227:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1179380-1179906:1:exon

position:1179906:1
position: 1179906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1180367-1180509:1:exon

position:1180367:1
position: 1180367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1180509:1
position: 1180509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1181302-1181415:1:exon

position:1181302:1
position: 1181302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1181415:1
position: 1181415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1181821-1183227:1:exon

position:1181821:1
position: 1181821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SIKE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SIKE1
product: suppressor of IKBKE 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030465567.1
SIO_010081: SIKE1
subclass of: SO_0000673
so part of: SIKE1
location: join(1179380..1179906,1180367..1180509,1181302..1181415,1182605..1183227)
location: region:1179380-1183227:1
so has part: feature:1179380-1179906:1:exon
so has part: feature:1180367-1180509:1:exon
so has part: feature:1181302-1181415:1:exon
so has part: feature:1182605-1183227:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1179380-1179906:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1180367-1180509:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1181302-1181415:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1182605-1183227:1:exon

position:1182605:1
position: 1182605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SIKE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SIKE1
product: suppressor of IKBKE 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030465566.1
SIO_010081: SIKE1
subclass of: SO_0000673
so part of: SIKE1
location: join(1179380..1179728,1179801..1179906,1180367..1180509,1181302..1181415,1181821..1183227)
location: region:1179380-1183227:1
so has part: feature:1179380-1179728:1:exon
so has part: feature:1179801-1179906:1:exon
so has part: feature:1180367-1180509:1:exon
so has part: feature:1181302-1181415:1:exon
so has part: feature:1181821-1183227:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1179380-1179728:1:exon

position:1179728:1
position: 1179728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1179801-1179906:1:exon

position:1179801:1
position: 1179801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1180367-1180509:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1181302-1181415:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1181821-1183227:1:exon

SIKE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SIKE1
product: suppressor of IKBKE 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_030465569.1
SIO_010081: SIKE1
subclass of: SO_0000673
so part of: SIKE1
location: join(1179380..1179906,1180367..1180509,1181302..1181415,1181801..1181912)
location: region:1179380-1181912:1
so has part: feature:1179380-1179906:1:exon
so has part: feature:1180367-1180509:1:exon
so has part: feature:1181302-1181415:1:exon
so has part: feature:1181801-1181912:1:exon

position:1181912:1
position: 1181912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1179380-1179906:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1180367-1180509:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1181302-1181415:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1181801-1181912:1:exon

position:1181801:1
position: 1181801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SIKE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SIKE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of IKBKE 1 isoform X3
translation: MTCTIEKILTDAKTLLERLKEHDTAAESLIDQSAVLHQRVAAMREAGAAWTEKVGTGGGRGRAGRAVGRGPTAVSPQGQAAPAEQADPSRLRPHVLLSQENTQIRDLQQENRELWISLEEHQDALELIMSKYRKQMLQLLQGRKAEDAQPVLKVHQANSLEIESQIDRICEMGDVMRKAVQVDDDQFFKVQEKLAQLETCSD
SIO_010081: SIKE1
subclass of: SO_0000673
so part of: SIKE1
location: join(1179570..1179906,1180367..1180509,1181302..1181415,1182605..1182619)
location: region:1179570-1182619:1
so has part: feature:1179570-1179906:1:exon
so has part: feature:1180367-1180509:1:exon
so has part: feature:1181302-1181415:1:exon
so has part: feature:1182605-1182619:1:exon

XP_030321427.1
type: Protein
SIO_000068: ncbiprotein

position:1179570:1
position: 1179570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1182619:1
position: 1182619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1179570-1179906:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1180367-1180509:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1181302-1181415:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1182605-1182619:1:exon

SIKE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SIKE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of IKBKE 1 isoform X1
translation: MTCTIEKILTDAKTLLERLKEHDTAAESLIDQSAVLHQRVAAMREAGAAWTEKVGTGGGRGRAGRAVGRGPTAVSPQGQAAPAEQADPSRLRPHVLLSQENTQIRDLQQENRELWISLEEHQDALELIMSKYRKQMLQLLQGRKAEDAQPVLKVHQANSLEIESQIDRICEMGDVMRKAVQVDDDQFFKVQEKLAQLELENKELRELLSISKESFEVGREDLPDCEA
SIO_010081: SIKE1
subclass of: SO_0000673
so part of: SIKE1
location: join(1179570..1179906,1180367..1180509,1181302..1181415,1181821..1181910)
location: region:1179570-1181910:1
so has part: feature:1179570-1179906:1:exon
so has part: feature:1180367-1180509:1:exon
so has part: feature:1181302-1181415:1:exon
so has part: feature:1181821-1181910:1:exon

XP_030321425.1
type: Protein
SIO_000068: ncbiprotein

position:1181910:1
position: 1181910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1179570-1179906:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1180367-1180509:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1181302-1181415:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1181821-1181910:1:exon

SIKE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SIKE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of IKBKE 1 isoform X2
translation: MTCTIEKILTDAKTLLERLKEHDTAAESLIDQSAVLHQRVAAMREAGAAWTEKGQAAPAEQADPSRLRPHVLLSQENTQIRDLQQENRELWISLEEHQDALELIMSKYRKQMLQLLQGRKAEDAQPVLKVHQANSLEIESQIDRICEMGDVMRKAVQVDDDQFFKVQEKLAQLELENKELRELLSISKESFEVGREDLPDCEA
SIO_010081: SIKE1
subclass of: SO_0000673
so part of: SIKE1
location: join(1179570..1179728,1179801..1179906,1180367..1180509,1181302..1181415,1181821..1181910)
location: region:1179570-1181910:1
so has part: feature:1179570-1179728:1:exon
so has part: feature:1179801-1179906:1:exon
so has part: feature:1180367-1180509:1:exon
so has part: feature:1181302-1181415:1:exon
so has part: feature:1181821-1181910:1:exon

XP_030321426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1179570-1179728:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1179801-1179906:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1180367-1180509:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1181302-1181415:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1181821-1181910:1:exon

SIKE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SIKE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of IKBKE 1 isoform X4
translation: MTCTIEKILTDAKTLLERLKEHDTAAESLIDQSAVLHQRVAAMREAGAAWTEKVGTGGGRGRAGRAVGRGPTAVSPQGQAAPAEQADPSRLRPHVLLSQENTQIRDLQQENRELWISLEEHQDALELIMSKYRKQMLQLLQGRKAEDAQPVLKVHQANSLEIESQIDRICEMGDVMRKAVQVDDDQFFKVQEKLAQLEKKC
SIO_010081: SIKE1
subclass of: SO_0000673
so part of: SIKE1
location: join(1179570..1179906,1180367..1180509,1181302..1181415,1181801..1181812)
location: region:1179570-1181812:1
so has part: feature:1179570-1179906:1:exon
so has part: feature:1180367-1180509:1:exon
so has part: feature:1181302-1181415:1:exon
so has part: feature:1181801-1181812:1:exon

XP_030321429.1
type: Protein
SIO_000068: ncbiprotein

position:1181812:1
position: 1181812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1179570-1179906:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1180367-1180509:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1181302-1181415:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1181801-1181812:1:exon

CSDE1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: CSDE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1184000..1200731
location: region:1184000-1200731:1
so has part: feature:1184000-1200731:1:exon
subclass of: SO_0000010

103525585
type: Gene
SIO_000068: ncbigene

position:1184000:1
position: 1184000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1200731:1
position: 1200731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1184000-1200731:1:exon

CSDE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CSDE1
product: cold shock domain containing E1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 72 ESTs, 5 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030465690.1
SIO_010081: CSDE1
subclass of: SO_0000673
so part of: CSDE1
location: join(1184000..1184091,1187706..1188140,1188782..1188980,1189826..1189935,1190280..1190372,1190878..1190975,1191131..1191212,1191562..1191690,1191845..1191970,1192859..1193071,1193919..1194059,1194148..1194306,1194876..1194983,1195659..1195834,1196202..1196314,1196498..1196617,1196846..1197024,1197843..1198006,1198793..1198925,1199446..1200731)
location: region:1184000-1200731:1
so has part: feature:1184000-1184091:1:exon
so has part: feature:1187706-1188140:1:exon
so has part: feature:1188782-1188980:1:exon
so has part: feature:1189826-1189935:1:exon
so has part: feature:1190280-1190372:1:exon
so has part: feature:1190878-1190975:1:exon
so has part: feature:1191131-1191212:1:exon
so has part: feature:1191562-1191690:1:exon
so has part: feature:1191845-1191970:1:exon
so has part: feature:1192859-1193071:1:exon
so has part: feature:1193919-1194059:1:exon
so has part: feature:1194148-1194306:1:exon
so has part: feature:1194876-1194983:1:exon
so has part: feature:1195659-1195834:1:exon
so has part: feature:1196202-1196314:1:exon
so has part: feature:1196498-1196617:1:exon
so has part: feature:1196846-1197024:1:exon
so has part: feature:1197843-1198006:1:exon
so has part: feature:1198793-1198925:1:exon
so has part: feature:1199446-1200731:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1184000-1184091:1:exon

position:1184091:1
position: 1184091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1187706-1188140:1:exon

position:1187706:1
position: 1187706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1188140:1
position: 1188140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1188782-1188980:1:exon

position:1188782:1
position: 1188782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1188980:1
position: 1188980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1189826-1189935:1:exon

position:1189826:1
position: 1189826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1189935:1
position: 1189935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1190280-1190372:1:exon

position:1190280:1
position: 1190280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1190372:1
position: 1190372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1190878-1190975:1:exon

position:1190878:1
position: 1190878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1190975:1
position: 1190975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1191131-1191212:1:exon

position:1191131:1
position: 1191131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1191212:1
position: 1191212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1191562-1191690:1:exon

position:1191562:1
position: 1191562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1191690:1
position: 1191690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1191845-1191970:1:exon

position:1191845:1
position: 1191845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1191970:1
position: 1191970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1192859-1193071:1:exon

position:1192859:1
position: 1192859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1193071:1
position: 1193071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1193919-1194059:1:exon

position:1193919:1
position: 1193919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1194059:1
position: 1194059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1194148-1194306:1:exon

position:1194148:1
position: 1194148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1194306:1
position: 1194306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1194876-1194983:1:exon

position:1194876:1
position: 1194876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1194983:1
position: 1194983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1195659-1195834:1:exon

position:1195659:1
position: 1195659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1195834:1
position: 1195834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1196202-1196314:1:exon

position:1196202:1
position: 1196202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1196314:1
position: 1196314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1196498-1196617:1:exon

position:1196498:1
position: 1196498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1196617:1
position: 1196617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1196846-1197024:1:exon

position:1196846:1
position: 1196846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1197024:1
position: 1197024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1197843-1198006:1:exon

position:1197843:1
position: 1197843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1198006:1
position: 1198006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1198793-1198925:1:exon

position:1198793:1
position: 1198793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1198925:1
position: 1198925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1199446-1200731:1:exon

position:1199446:1
position: 1199446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CSDE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CSDE1
product: cold shock domain containing E1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 60 ESTs, 2 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030465692.1
SIO_010081: CSDE1
subclass of: SO_0000673
so part of: CSDE1
location: join(1184003..1184091,1187706..1188140,1188782..1188980,1189826..1189935,1190878..1190975,1191131..1191212,1191562..1191690,1191845..1191970,1192859..1193071,1193919..1194059,1194148..1194306,1194876..1194983,1195659..1195834,1196202..1196314,1196498..1196617,1196846..1197024,1197843..1198006,1198793..1198925,1199446..1200383)
location: region:1184003-1200383:1
so has part: feature:1184003-1184091:1:exon
so has part: feature:1187706-1188140:1:exon
so has part: feature:1188782-1188980:1:exon
so has part: feature:1189826-1189935:1:exon
so has part: feature:1190878-1190975:1:exon
so has part: feature:1191131-1191212:1:exon
so has part: feature:1191562-1191690:1:exon
so has part: feature:1191845-1191970:1:exon
so has part: feature:1192859-1193071:1:exon
so has part: feature:1193919-1194059:1:exon
so has part: feature:1194148-1194306:1:exon
so has part: feature:1194876-1194983:1:exon
so has part: feature:1195659-1195834:1:exon
so has part: feature:1196202-1196314:1:exon
so has part: feature:1196498-1196617:1:exon
so has part: feature:1196846-1197024:1:exon
so has part: feature:1197843-1198006:1:exon
so has part: feature:1198793-1198925:1:exon
so has part: feature:1199446-1200383:1:exon

position:1184003:1
position: 1184003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1200383:1
position: 1200383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1184003-1184091:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1187706-1188140:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1188782-1188980:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1189826-1189935:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1190878-1190975:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1191131-1191212:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1191562-1191690:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1191845-1191970:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1192859-1193071:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1193919-1194059:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1194148-1194306:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1194876-1194983:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1195659-1195834:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1196202-1196314:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1196498-1196617:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1196846-1197024:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1197843-1198006:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1198793-1198925:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1199446-1200383:1:exon

CSDE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CSDE1
product: cold shock domain containing E1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 50 ESTs, 2 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030465691.1
SIO_010081: CSDE1
subclass of: SO_0000673
so part of: CSDE1
location: join(1184880..1184952,1187706..1188140,1188782..1188980,1189826..1189935,1190280..1190372,1190878..1190975,1191131..1191212,1191562..1191690,1191845..1191970,1192859..1193071,1193919..1194059,1194148..1194306,1194876..1194983,1195659..1195834,1196202..1196314,1196498..1196617,1196846..1197024,1197843..1198006,1198793..1198925,1199446..1200383)
location: region:1184880-1200383:1
so has part: feature:1184880-1184952:1:exon
so has part: feature:1187706-1188140:1:exon
so has part: feature:1188782-1188980:1:exon
so has part: feature:1189826-1189935:1:exon
so has part: feature:1190280-1190372:1:exon
so has part: feature:1190878-1190975:1:exon
so has part: feature:1191131-1191212:1:exon
so has part: feature:1191562-1191690:1:exon
so has part: feature:1191845-1191970:1:exon
so has part: feature:1192859-1193071:1:exon
so has part: feature:1193919-1194059:1:exon
so has part: feature:1194148-1194306:1:exon
so has part: feature:1194876-1194983:1:exon
so has part: feature:1195659-1195834:1:exon
so has part: feature:1196202-1196314:1:exon
so has part: feature:1196498-1196617:1:exon
so has part: feature:1196846-1197024:1:exon
so has part: feature:1197843-1198006:1:exon
so has part: feature:1198793-1198925:1:exon
so has part: feature:1199446-1200383:1:exon

position:1184880:1
position: 1184880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1184880-1184952:1:exon

position:1184952:1
position: 1184952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1187706-1188140:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1188782-1188980:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1189826-1189935:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1190280-1190372:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1190878-1190975:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1191131-1191212:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1191562-1191690:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1191845-1191970:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1192859-1193071:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1193919-1194059:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1194148-1194306:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1194876-1194983:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1195659-1195834:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1196202-1196314:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1196498-1196617:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1196846-1197024:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1197843-1198006:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1198793-1198925:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1199446-1200383:1:exon

CSDE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CSDE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cold shock domain-containing protein E1 isoform X1
translation: MSFDPNLLHNNGHNGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNLQELKVGDDVEFEVSSDRRTGKPIAIKLVKIKPEILPEERINGQVVCAVPHNLESKSPAAPGQSPTGSVCYERNGEVFYLTYTPEDVEGNVQLETGDKINFVIDTNKHTGAVSARNIMLLKKKQARCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLEALQPGDDVEFTIKDRNGKEVATDVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPSKNQSDPLPGRIKVDFVIPKELPFGDKDTKSKVTLLESDHVRFNISTDRRDKLERATNIEVLPNTFQFTNETREMGVIAAMRDGFGFIKCVDRDARMFFHFSEIMDGNQLHISDEVEFTVVPDMLSTQRNHAIRIKKLPKGTVSFHTQSDHRFVGTIEKEATPAKATSPNKGKEKEAEDGLIVYDDCGVKLTVPYQAKDVEGSANPQIGDKVEFSVCEVKRTGLQTAVSVRMLGRNYSSKRLLGYVAALKDNFGFIETANHDKEIFFHYSEYCGDIDSLELGDTVEYSLSKGKGNKVSAEKVNKTHAVNGITEEADPTVYSGKVIRPLRSVDPTQTEYQGMIEVMEDGEMKGEVYPFGIVGMANKGDCLQKGETVKFQLCVLGQNGQTMAVNITPFRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQDGVELQAGDEVEFSVILNQRTGKCSACNVWRVCEGAKAVAAPRPDRLVNRLKSINLDDANAPRLTVLRQPRGPDNSKGFGAERKIRQAGVID
SIO_010081: CSDE1
subclass of: SO_0000673
so part of: CSDE1
location: join(1188782..1188980,1189826..1189935,1190280..1190372,1190878..1190975,1191131..1191212,1191562..1191690,1191845..1191970,1192859..1193071,1193919..1194059,1194148..1194306,1194876..1194983,1195659..1195834,1196202..1196314,1196498..1196617,1196846..1197024,1197843..1198006,1198793..1198925,1199446..1199493)
location: region:1188782-1199493:1
so has part: feature:1188782-1188980:1:exon
so has part: feature:1189826-1189935:1:exon
so has part: feature:1190280-1190372:1:exon
so has part: feature:1190878-1190975:1:exon
so has part: feature:1191131-1191212:1:exon
so has part: feature:1191562-1191690:1:exon
so has part: feature:1191845-1191970:1:exon
so has part: feature:1192859-1193071:1:exon
so has part: feature:1193919-1194059:1:exon
so has part: feature:1194148-1194306:1:exon
so has part: feature:1194876-1194983:1:exon
so has part: feature:1195659-1195834:1:exon
so has part: feature:1196202-1196314:1:exon
so has part: feature:1196498-1196617:1:exon
so has part: feature:1196846-1197024:1:exon
so has part: feature:1197843-1198006:1:exon
so has part: feature:1198793-1198925:1:exon
so has part: feature:1199446-1199493:1:exon

XP_030321550.1
type: Protein
SIO_000068: ncbiprotein

position:1199493:1
position: 1199493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1188782-1188980:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1189826-1189935:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1190280-1190372:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1190878-1190975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1191131-1191212:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1191562-1191690:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1191845-1191970:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1192859-1193071:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1193919-1194059:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1194148-1194306:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1194876-1194983:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1195659-1195834:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1196202-1196314:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1196498-1196617:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1196846-1197024:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1197843-1198006:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1198793-1198925:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1199446-1199493:1:exon

CSDE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CSDE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cold shock domain-containing protein E1 isoform X1
translation: MSFDPNLLHNNGHNGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNLQELKVGDDVEFEVSSDRRTGKPIAIKLVKIKPEILPEERINGQVVCAVPHNLESKSPAAPGQSPTGSVCYERNGEVFYLTYTPEDVEGNVQLETGDKINFVIDTNKHTGAVSARNIMLLKKKQARCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLEALQPGDDVEFTIKDRNGKEVATDVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPSKNQSDPLPGRIKVDFVIPKELPFGDKDTKSKVTLLESDHVRFNISTDRRDKLERATNIEVLPNTFQFTNETREMGVIAAMRDGFGFIKCVDRDARMFFHFSEIMDGNQLHISDEVEFTVVPDMLSTQRNHAIRIKKLPKGTVSFHTQSDHRFVGTIEKEATPAKATSPNKGKEKEAEDGLIVYDDCGVKLTVPYQAKDVEGSANPQIGDKVEFSVCEVKRTGLQTAVSVRMLGRNYSSKRLLGYVAALKDNFGFIETANHDKEIFFHYSEYCGDIDSLELGDTVEYSLSKGKGNKVSAEKVNKTHAVNGITEEADPTVYSGKVIRPLRSVDPTQTEYQGMIEVMEDGEMKGEVYPFGIVGMANKGDCLQKGETVKFQLCVLGQNGQTMAVNITPFRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQDGVELQAGDEVEFSVILNQRTGKCSACNVWRVCEGAKAVAAPRPDRLVNRLKSINLDDANAPRLTVLRQPRGPDNSKGFGAERKIRQAGVID
SIO_010081: CSDE1
subclass of: SO_0000673
so part of: CSDE1
location: join(1188782..1188980,1189826..1189935,1190280..1190372,1190878..1190975,1191131..1191212,1191562..1191690,1191845..1191970,1192859..1193071,1193919..1194059,1194148..1194306,1194876..1194983,1195659..1195834,1196202..1196314,1196498..1196617,1196846..1197024,1197843..1198006,1198793..1198925,1199446..1199493)
location: region:1188782-1199493:1
so has part: feature:1188782-1188980:1:exon
so has part: feature:1189826-1189935:1:exon
so has part: feature:1190280-1190372:1:exon
so has part: feature:1190878-1190975:1:exon
so has part: feature:1191131-1191212:1:exon
so has part: feature:1191562-1191690:1:exon
so has part: feature:1191845-1191970:1:exon
so has part: feature:1192859-1193071:1:exon
so has part: feature:1193919-1194059:1:exon
so has part: feature:1194148-1194306:1:exon
so has part: feature:1194876-1194983:1:exon
so has part: feature:1195659-1195834:1:exon
so has part: feature:1196202-1196314:1:exon
so has part: feature:1196498-1196617:1:exon
so has part: feature:1196846-1197024:1:exon
so has part: feature:1197843-1198006:1:exon
so has part: feature:1198793-1198925:1:exon
so has part: feature:1199446-1199493:1:exon

XP_030321551.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1188782-1188980:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1189826-1189935:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1190280-1190372:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1190878-1190975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1191131-1191212:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1191562-1191690:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1191845-1191970:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1192859-1193071:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1193919-1194059:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1194148-1194306:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1194876-1194983:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1195659-1195834:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1196202-1196314:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1196498-1196617:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1196846-1197024:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1197843-1198006:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1198793-1198925:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1199446-1199493:1:exon

CSDE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CSDE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cold shock domain-containing protein E1 isoform X2
translation: MSFDPNLLHNNGHNGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNLQELKVGDDVEFEVSSDRRTGKPIAIKLVKIKPEILPEERINGQEVFYLTYTPEDVEGNVQLETGDKINFVIDTNKHTGAVSARNIMLLKKKQARCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLEALQPGDDVEFTIKDRNGKEVATDVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPSKNQSDPLPGRIKVDFVIPKELPFGDKDTKSKVTLLESDHVRFNISTDRRDKLERATNIEVLPNTFQFTNETREMGVIAAMRDGFGFIKCVDRDARMFFHFSEIMDGNQLHISDEVEFTVVPDMLSTQRNHAIRIKKLPKGTVSFHTQSDHRFVGTIEKEATPAKATSPNKGKEKEAEDGLIVYDDCGVKLTVPYQAKDVEGSANPQIGDKVEFSVCEVKRTGLQTAVSVRMLGRNYSSKRLLGYVAALKDNFGFIETANHDKEIFFHYSEYCGDIDSLELGDTVEYSLSKGKGNKVSAEKVNKTHAVNGITEEADPTVYSGKVIRPLRSVDPTQTEYQGMIEVMEDGEMKGEVYPFGIVGMANKGDCLQKGETVKFQLCVLGQNGQTMAVNITPFRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQDGVELQAGDEVEFSVILNQRTGKCSACNVWRVCEGAKAVAAPRPDRLVNRLKSINLDDANAPRLTVLRQPRGPDNSKGFGAERKIRQAGVID
SIO_010081: CSDE1
subclass of: SO_0000673
so part of: CSDE1
location: join(1188782..1188980,1189826..1189935,1190878..1190975,1191131..1191212,1191562..1191690,1191845..1191970,1192859..1193071,1193919..1194059,1194148..1194306,1194876..1194983,1195659..1195834,1196202..1196314,1196498..1196617,1196846..1197024,1197843..1198006,1198793..1198925,1199446..1199493)
location: region:1188782-1199493:1
so has part: feature:1188782-1188980:1:exon
so has part: feature:1189826-1189935:1:exon
so has part: feature:1190878-1190975:1:exon
so has part: feature:1191131-1191212:1:exon
so has part: feature:1191562-1191690:1:exon
so has part: feature:1191845-1191970:1:exon
so has part: feature:1192859-1193071:1:exon
so has part: feature:1193919-1194059:1:exon
so has part: feature:1194148-1194306:1:exon
so has part: feature:1194876-1194983:1:exon
so has part: feature:1195659-1195834:1:exon
so has part: feature:1196202-1196314:1:exon
so has part: feature:1196498-1196617:1:exon
so has part: feature:1196846-1197024:1:exon
so has part: feature:1197843-1198006:1:exon
so has part: feature:1198793-1198925:1:exon
so has part: feature:1199446-1199493:1:exon

XP_030321552.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1188782-1188980:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1189826-1189935:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1190878-1190975:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1191131-1191212:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1191562-1191690:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1191845-1191970:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1192859-1193071:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1193919-1194059:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1194148-1194306:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1194876-1194983:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1195659-1195834:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1196202-1196314:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1196498-1196617:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1196846-1197024:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1197843-1198006:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1198793-1198925:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1199446-1199493:1:exon

NRAS
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: NRAS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1200853..1205265
location: region:1200853-1205265:1
so has part: feature:1200853-1205265:1:exon
subclass of: SO_0000010

103525584
type: Gene
SIO_000068: ncbigene

position:1200853:1
position: 1200853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1205265:1
position: 1205265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1200853-1205265:1:exon

NRAS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NRAS
product: NRAS proto-oncogene, GTPase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 1 long SRA read, 90 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_008490545.2
SIO_010081: NRAS
subclass of: SO_0000673
so part of: NRAS
location: join(1200853..1201043,1201673..1201851,1202292..1202451,1203891..1204014,1204682..1205265)
location: region:1200853-1205265:1
so has part: feature:1200853-1201043:1:exon
so has part: feature:1201673-1201851:1:exon
so has part: feature:1202292-1202451:1:exon
so has part: feature:1203891-1204014:1:exon
so has part: feature:1204682-1205265:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1200853-1201043:1:exon

position:1201043:1
position: 1201043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1201673-1201851:1:exon

position:1201673:1
position: 1201673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1201851:1
position: 1201851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1202292-1202451:1:exon

position:1202292:1
position: 1202292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1202451:1
position: 1202451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1203891-1204014:1:exon

position:1203891:1
position: 1203891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1204014:1
position: 1204014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1204682-1205265:1:exon

position:1204682:1
position: 1204682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NRAS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NRAS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTPase NRas
translation: MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLPTRTVDTKQAQELAKSYGIPFIETSAKTRQGVEDAFYTLVREIRQYRMKKLNSNEDGNQGCMGLSCVVM
SIO_010081: NRAS
subclass of: SO_0000673
so part of: NRAS
location: join(1200933..1201043,1201673..1201851,1202292..1202451,1203891..1204010)
location: region:1200933-1204010:1
so has part: feature:1200933-1201043:1:exon
so has part: feature:1201673-1201851:1:exon
so has part: feature:1202292-1202451:1:exon
so has part: feature:1203891-1204010:1:exon

XP_008488767.2
type: Protein
SIO_000068: ncbiprotein

position:1200933:1
position: 1200933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1204010:1
position: 1204010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1200933-1201043:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1201673-1201851:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1202292-1202451:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1203891-1204010:1:exon

AMPD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: AMPD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1210362..1219369
location: region:1210362-1219369:1
so has part: feature:1210362-1219369:1:exon
subclass of: SO_0000010

103525606
type: Gene
SIO_000068: ncbigene

position:1210362:1
position: 1210362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1219369:1
position: 1219369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1210362-1219369:1:exon

AMPD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: AMPD1
product: adenosine monophosphate deaminase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 27 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_008490569.2
SIO_010081: AMPD1
subclass of: SO_0000673
so part of: AMPD1
location: join(1210362..1210426,1212923..1213097,1213632..1213797,1214525..1214687,1214923..1215142,1215545..1215674,1215959..1216153,1216394..1216525,1216621..1216784,1216916..1217042,1217457..1217620,1217990..1218110,1218562..1218735,1218917..1219027,1219194..1219369)
location: region:1210362-1219369:1
so has part: feature:1210362-1210426:1:exon
so has part: feature:1212923-1213097:1:exon
so has part: feature:1213632-1213797:1:exon
so has part: feature:1214525-1214687:1:exon
so has part: feature:1214923-1215142:1:exon
so has part: feature:1215545-1215674:1:exon
so has part: feature:1215959-1216153:1:exon
so has part: feature:1216394-1216525:1:exon
so has part: feature:1216621-1216784:1:exon
so has part: feature:1216916-1217042:1:exon
so has part: feature:1217457-1217620:1:exon
so has part: feature:1217990-1218110:1:exon
so has part: feature:1218562-1218735:1:exon
so has part: feature:1218917-1219027:1:exon
so has part: feature:1219194-1219369:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1210362-1210426:1:exon

position:1210426:1
position: 1210426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1212923-1213097:1:exon

position:1212923:1
position: 1212923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1213097:1
position: 1213097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1213632-1213797:1:exon

position:1213632:1
position: 1213632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1213797:1
position: 1213797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1214525-1214687:1:exon

position:1214525:1
position: 1214525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1214687:1
position: 1214687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1214923-1215142:1:exon

position:1214923:1
position: 1214923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1215142:1
position: 1215142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1215545-1215674:1:exon

position:1215545:1
position: 1215545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1215674:1
position: 1215674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1215959-1216153:1:exon

position:1215959:1
position: 1215959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1216153:1
position: 1216153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1216394-1216525:1:exon

position:1216394:1
position: 1216394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1216525:1
position: 1216525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1216621-1216784:1:exon

position:1216621:1
position: 1216621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1216784:1
position: 1216784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1216916-1217042:1:exon

position:1216916:1
position: 1216916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1217042:1
position: 1217042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1217457-1217620:1:exon

position:1217457:1
position: 1217457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1217620:1
position: 1217620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1217990-1218110:1:exon

position:1217990:1
position: 1217990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1218110:1
position: 1218110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1218562-1218735:1:exon

position:1218562:1
position: 1218562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1218735:1
position: 1218735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1218917-1219027:1:exon

position:1218917:1
position: 1218917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1219027:1
position: 1219027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1219194-1219369:1:exon

position:1219194:1
position: 1219194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AMPD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: AMPD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AMP deaminase 1
translation: MSRISEVDEALRSFAEKVFASEVKDEETRREFSPFDVEEICPISREEMRVHMMLRETSATAEKRRKRLFHLKTIALAIPVAQKSTTRLSDIDEVISTSPVYQTVPHFQRVQITGDYASGVAVEDFEAVCKGLYRALCIREKYMQQCLQRFPRTPSQYLSAIEGKVWRASDTGPVFTPPVKDGQDPFETGNLAEDLGYHLQMKDGVVYIYEDKAAADRNEPKDLPYPSLESFIADMNFLLALIAQGPVKTYAHRRLKFLLSKFQVHEMLNEMEEMKELKNNPHRDFYNCRKVDTHIHAAACMNQNHLLRFIKNSYCVDADRVVYDATGKQLTLKQLFNKLNMHPYDLTVDSLDVHAGRQTFQRFDKFNDKYNPVGASELRDLYLKTDNAINGEYFATIIKEVGSDLEKAKYQYAEPRLSIYGRSAEEWHKLATWFNKHRIYSPNMKWMIQVPRIYDVFRSRNFLPHFGKMLENLFIPVFEATINPQAHKELSVFLRHITGFDSVDDESKHSGHMFCTKSPKPEQWTSQKNPSYSYYLYYMYANILVLNNLRRQRGMNTFLFRPHCGEAGAITHLLTAFMTADNISHGLNLKQSPVLQYLYFLAQIPIAMSPLSNNSLFLEYAKNPFLDFHQKGLMLSLSTDDPMQFHYTKEPLMEEYAIAAQVFKLSTCDMCEIARNSVLQSGMSHEEKLKILGENYQEEGPQGNDIRKTNVAQIRVAYRYETWCYELNLIAEGLKAD
SIO_010081: AMPD1
subclass of: SO_0000673
so part of: AMPD1
location: join(1210411..1210426,1212923..1213097,1213632..1213797,1214525..1214687,1214923..1215142,1215545..1215674,1215959..1216153,1216394..1216525,1216621..1216784,1216916..1217042,1217457..1217620,1217990..1218110,1218562..1218735,1218917..1219027,1219194..1219349)
location: region:1210411-1219349:1
so has part: feature:1210411-1210426:1:exon
so has part: feature:1212923-1213097:1:exon
so has part: feature:1213632-1213797:1:exon
so has part: feature:1214525-1214687:1:exon
so has part: feature:1214923-1215142:1:exon
so has part: feature:1215545-1215674:1:exon
so has part: feature:1215959-1216153:1:exon
so has part: feature:1216394-1216525:1:exon
so has part: feature:1216621-1216784:1:exon
so has part: feature:1216916-1217042:1:exon
so has part: feature:1217457-1217620:1:exon
so has part: feature:1217990-1218110:1:exon
so has part: feature:1218562-1218735:1:exon
so has part: feature:1218917-1219027:1:exon
so has part: feature:1219194-1219349:1:exon

XP_008488791.2
type: Protein
SIO_000068: ncbiprotein

position:1210411:1
position: 1210411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1219349:1
position: 1219349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1210411-1210426:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1212923-1213097:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1213632-1213797:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1214525-1214687:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1214923-1215142:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1215545-1215674:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1215959-1216153:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1216394-1216525:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1216621-1216784:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1216916-1217042:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1217457-1217620:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1217990-1218110:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1218562-1218735:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1218917-1219027:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1219194-1219349:1:exon

DENND2C
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: DENND2C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1219563..1234896
location: region:1219563-1234896:1
so has part: feature:1219563-1234896:1:exon
subclass of: SO_0000010

103525587
type: Gene
SIO_000068: ncbigene

position:1219563:1
position: 1219563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1234896:1
position: 1234896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1219563-1234896:1:exon

DENND2C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: DENND2C
product: DENN domain containing 2C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030465410.1
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(1219563..1219749,1221631..1222589,1224244..1224392,1224943..1225055,1225376..1225543,1226645..1226741,1228745..1228932,1229772..1229881,1230002..1230071,1231039..1231112,1231248..1231338,1231732..1231872,1232214..1232362,1232789..1232966,1233275..1233316,1233478..1233583,1233916..1234155,1234484..1234570,1234752..1234896)
location: region:1219563-1234896:1
so has part: feature:1219563-1219749:1:exon
so has part: feature:1221631-1222589:1:exon
so has part: feature:1224244-1224392:1:exon
so has part: feature:1224943-1225055:1:exon
so has part: feature:1225376-1225543:1:exon
so has part: feature:1226645-1226741:1:exon
so has part: feature:1228745-1228932:1:exon
so has part: feature:1229772-1229881:1:exon
so has part: feature:1230002-1230071:1:exon
so has part: feature:1231039-1231112:1:exon
so has part: feature:1231248-1231338:1:exon
so has part: feature:1231732-1231872:1:exon
so has part: feature:1232214-1232362:1:exon
so has part: feature:1232789-1232966:1:exon
so has part: feature:1233275-1233316:1:exon
so has part: feature:1233478-1233583:1:exon
so has part: feature:1233916-1234155:1:exon
so has part: feature:1234484-1234570:1:exon
so has part: feature:1234752-1234896:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1219563-1219749:1:exon

position:1219749:1
position: 1219749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1221631-1222589:1:exon

position:1221631:1
position: 1221631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1222589:1
position: 1222589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1224244-1224392:1:exon

position:1224244:1
position: 1224244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1224392:1
position: 1224392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1224943-1225055:1:exon

position:1224943:1
position: 1224943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1225055:1
position: 1225055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1225376-1225543:1:exon

position:1225376:1
position: 1225376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1225543:1
position: 1225543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1226645-1226741:1:exon

position:1226645:1
position: 1226645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1226741:1
position: 1226741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1228745-1228932:1:exon

position:1228745:1
position: 1228745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1228932:1
position: 1228932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1229772-1229881:1:exon

position:1229772:1
position: 1229772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1229881:1
position: 1229881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1230002-1230071:1:exon

position:1230002:1
position: 1230002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1230071:1
position: 1230071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1231039-1231112:1:exon

position:1231039:1
position: 1231039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1231112:1
position: 1231112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1231248-1231338:1:exon

position:1231248:1
position: 1231248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1231338:1
position: 1231338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1231732-1231872:1:exon

position:1231732:1
position: 1231732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1231872:1
position: 1231872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1232214-1232362:1:exon

position:1232214:1
position: 1232214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1232362:1
position: 1232362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1232789-1232966:1:exon

position:1232789:1
position: 1232789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1232966:1
position: 1232966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1233275-1233316:1:exon

position:1233275:1
position: 1233275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1233316:1
position: 1233316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1233478-1233583:1:exon

position:1233478:1
position: 1233478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1233583:1
position: 1233583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1233916-1234155:1:exon

position:1233916:1
position: 1233916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1234155:1
position: 1234155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1234484-1234570:1:exon

position:1234484:1
position: 1234484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1234570:1
position: 1234570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1234752-1234896:1:exon

position:1234752:1
position: 1234752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DENND2C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: DENND2C
product: DENN domain containing 2C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030465409.1
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(1219564..1219749,1221631..1222589,1224244..1224392,1224943..1225055,1225376..1225543,1226645..1226741,1227485..1227529,1228745..1228932,1229772..1229881,1230002..1230071,1231039..1231112,1231248..1231338,1231732..1231872,1232214..1232362,1232789..1232966,1233275..1233316,1233478..1233583,1233916..1234155,1234484..1234570,1234752..1234896)
location: region:1219564-1234896:1
so has part: feature:1219564-1219749:1:exon
so has part: feature:1221631-1222589:1:exon
so has part: feature:1224244-1224392:1:exon
so has part: feature:1224943-1225055:1:exon
so has part: feature:1225376-1225543:1:exon
so has part: feature:1226645-1226741:1:exon
so has part: feature:1227485-1227529:1:exon
so has part: feature:1228745-1228932:1:exon
so has part: feature:1229772-1229881:1:exon
so has part: feature:1230002-1230071:1:exon
so has part: feature:1231039-1231112:1:exon
so has part: feature:1231248-1231338:1:exon
so has part: feature:1231732-1231872:1:exon
so has part: feature:1232214-1232362:1:exon
so has part: feature:1232789-1232966:1:exon
so has part: feature:1233275-1233316:1:exon
so has part: feature:1233478-1233583:1:exon
so has part: feature:1233916-1234155:1:exon
so has part: feature:1234484-1234570:1:exon
so has part: feature:1234752-1234896:1:exon

position:1219564:1
position: 1219564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1219564-1219749:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1221631-1222589:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1224244-1224392:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1224943-1225055:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1225376-1225543:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1226645-1226741:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1227485-1227529:1:exon

position:1227485:1
position: 1227485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1227529:1
position: 1227529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1228745-1228932:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1229772-1229881:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1230002-1230071:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1231039-1231112:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1231248-1231338:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1231732-1231872:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1232214-1232362:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1232789-1232966:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1233275-1233316:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1233478-1233583:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1233916-1234155:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1234484-1234570:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1234752-1234896:1:exon

DENND2C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: DENND2C
product: DENN domain containing 2C, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 long SRA read, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030465411.1
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(1219622..1219749,1221631..1222589,1224244..1224392,1224943..1225055,1225376..1225543,1226645..1226741,1227485..1227529,1228745..1228932,1229772..1229881,1230002..1230071,1231035..1231112,1231732..1231872,1232214..1232362,1232789..1232966,1233275..1233316,1233478..1233583,1233916..1234155,1234484..1234570,1234752..1234881)
location: region:1219622-1234881:1
so has part: feature:1219622-1219749:1:exon
so has part: feature:1221631-1222589:1:exon
so has part: feature:1224244-1224392:1:exon
so has part: feature:1224943-1225055:1:exon
so has part: feature:1225376-1225543:1:exon
so has part: feature:1226645-1226741:1:exon
so has part: feature:1227485-1227529:1:exon
so has part: feature:1228745-1228932:1:exon
so has part: feature:1229772-1229881:1:exon
so has part: feature:1230002-1230071:1:exon
so has part: feature:1231035-1231112:1:exon
so has part: feature:1231732-1231872:1:exon
so has part: feature:1232214-1232362:1:exon
so has part: feature:1232789-1232966:1:exon
so has part: feature:1233275-1233316:1:exon
so has part: feature:1233478-1233583:1:exon
so has part: feature:1233916-1234155:1:exon
so has part: feature:1234484-1234570:1:exon
so has part: feature:1234752-1234881:1:exon

position:1219622:1
position: 1219622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1234881:1
position: 1234881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1219622-1219749:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1221631-1222589:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1224244-1224392:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1224943-1225055:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1225376-1225543:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1226645-1226741:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1227485-1227529:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1228745-1228932:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1229772-1229881:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1230002-1230071:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1231035-1231112:1:exon

position:1231035:1
position: 1231035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1231732-1231872:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1232214-1232362:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1232789-1232966:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1233275-1233316:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1233478-1233583:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1233916-1234155:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1234484-1234570:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1234752-1234881:1:exon

DENND2C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: DENND2C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 2C isoform X3
translation: MHPTGSADSSFSRSAVQTLSRSHCRNIKQKISQWEGRTQGCSSKEKQQLKDFGVKYDPSCNALPKVKPEHTEKSRKNGSKDPKSLGLDFREDAQICLQTADSDDVKPCTCSPASQAKEKGECQAGSLDPGAPLPPENFYTFQAPWRRVVPLLTGKSPPVPSNLQLKCRNCGSTERELKGVDSLCRTERNLKNIYSEAEGQEEEPASVPPPKPRRTFRYLAEKGTSSCNNESTTREAPLQKQHGGDMLSSSNNPEKRTVSRRIKGRAQRKSFEFEDIQGFRNRMATSNSHRLREETNGTTGSRLIYTQSEDNIYEDIICPAKENHYEDIRALPLPLWKVPSVWKLPPSQSTSRAPKPPPKPPFLSFKSLELKPSQTSFQRKMVKDTALPVTLNEWKLFQAVEAASRRKNLPGLVLKIRDIFDSKRGKKRVKLLSPAGREASPMKGETSGNESDTENQPKSQHRCLLQVQSASKRNPHYQTLERDLIELQEQQLFELFVVVSLHKKASEVAYTPQIIQQFPSKTEHPFRQSKDTEERLKVIPKFCFPDPKDWFPASDLKSETFSFVLTGEDGSRWFGYCKKLLPEGKGKRLPEVYCIISRLGCFNLFSKILDEVEKRREMSPALVQPFMRSVMEAPFPAPGRTITVRSFLPGAGHKVMELRRPLDSRLEHVDFECLFKCLSVSHMIRVFASLLLERRVIFVADNLSTLSKCGHAAVATLYPFTWQHTYIPVLPSSMIDIVCSPTPFLIGILSCSLPQLRDLPIEEVLIVDLCADKFLQEVSDEDDILPHKLQAALVQILEERSEILSHEQSDTQGDMPLNSLVSEAFVQFFVEIVGHYSLHVTVTEKGERVFQWEPFRKSHVSRNVRHFLHFFMETQMFAGFVQDRELRKNMVKGLFEVRALEYLESISETEQPGMNKILRSLGNKMKFLRKR
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(1221787..1222589,1224244..1224392,1224943..1225055,1225376..1225543,1226645..1226741,1227485..1227529,1228745..1228932,1229772..1229881,1230002..1230071,1231035..1231112,1231732..1231872,1232214..1232362,1232789..1232966,1233275..1233316,1233478..1233583,1233916..1234155,1234484..1234570,1234752..1234783)
location: region:1221787-1234783:1
so has part: feature:1221787-1222589:1:exon
so has part: feature:1224244-1224392:1:exon
so has part: feature:1224943-1225055:1:exon
so has part: feature:1225376-1225543:1:exon
so has part: feature:1226645-1226741:1:exon
so has part: feature:1227485-1227529:1:exon
so has part: feature:1228745-1228932:1:exon
so has part: feature:1229772-1229881:1:exon
so has part: feature:1230002-1230071:1:exon
so has part: feature:1231035-1231112:1:exon
so has part: feature:1231732-1231872:1:exon
so has part: feature:1232214-1232362:1:exon
so has part: feature:1232789-1232966:1:exon
so has part: feature:1233275-1233316:1:exon
so has part: feature:1233478-1233583:1:exon
so has part: feature:1233916-1234155:1:exon
so has part: feature:1234484-1234570:1:exon
so has part: feature:1234752-1234783:1:exon

XP_030321271.1
type: Protein
SIO_000068: ncbiprotein

position:1221787:1
position: 1221787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1234783:1
position: 1234783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1221787-1222589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1224244-1224392:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1224943-1225055:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1225376-1225543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1226645-1226741:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1227485-1227529:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1228745-1228932:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1229772-1229881:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1230002-1230071:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1231035-1231112:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1231732-1231872:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1232214-1232362:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1232789-1232966:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1233275-1233316:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1233478-1233583:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1233916-1234155:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1234484-1234570:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1234752-1234783:1:exon

DENND2C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: DENND2C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 2C isoform X1
translation: MHPTGSADSSFSRSAVQTLSRSHCRNIKQKISQWEGRTQGCSSKEKQQLKDFGVKYDPSCNALPKVKPEHTEKSRKNGSKDPKSLGLDFREDAQICLQTADSDDVKPCTCSPASQAKEKGECQAGSLDPGAPLPPENFYTFQAPWRRVVPLLTGKSPPVPSNLQLKCRNCGSTERELKGVDSLCRTERNLKNIYSEAEGQEEEPASVPPPKPRRTFRYLAEKGTSSCNNESTTREAPLQKQHGGDMLSSSNNPEKRTVSRRIKGRAQRKSFEFEDIQGFRNRMATSNSHRLREETNGTTGSRLIYTQSEDNIYEDIICPAKENHYEDIRALPLPLWKVPSVWKLPPSQSTSRAPKPPPKPPFLSFKSLELKPSQTSFQRKMVKDTALPVTLNEWKLFQAVEAASRRKNLPGLVLKIRDIFDSKRGKKRVKLLSPAGREASPMKGETSGNESDTENQPKSQHRCLLQVQSASKRNPHYQTLERDLIELQEQQLFELFVVVSLHKKASEVAYTPQIIQQFPSKTEHPFRQSKDTEERLKVIPKFCFPDPKDWFPASDLKSETFSFVLTGEDGSRWFGYCKKLLKGKGSVFLRSTASSAAWAASTSSPSCENLISTYKTFPEIAGDCIGEWRVVLTGSQILDEVEKRREMSPALVQPFMRSVMEAPFPAPGRTITVRSFLPGAGHKVMELRRPLDSRLEHVDFECLFKCLSVSHMIRVFASLLLERRVIFVADNLSTLSKCGHAAVATLYPFTWQHTYIPVLPSSMIDIVCSPTPFLIGILSCSLPQLRDLPIEEVLIVDLCADKFLQEVSDEDDILPHKLQAALVQILEERSEILSHEQSDTQGDMPLNSLVSEAFVQFFVEIVGHYSLHVTVTEKGERVFQWEPFRKSHVSRNVRHFLHFFMETQMFAGFVQDRELRKNMVKGLFEVRALEYLESISETEQPGMNKILRSLGNKMKFLRKR
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(1221787..1222589,1224244..1224392,1224943..1225055,1225376..1225543,1226645..1226741,1227485..1227529,1228745..1228932,1229772..1229881,1230002..1230071,1231039..1231112,1231248..1231338,1231732..1231872,1232214..1232362,1232789..1232966,1233275..1233316,1233478..1233583,1233916..1234155,1234484..1234570,1234752..1234783)
location: region:1221787-1234783:1
so has part: feature:1221787-1222589:1:exon
so has part: feature:1224244-1224392:1:exon
so has part: feature:1224943-1225055:1:exon
so has part: feature:1225376-1225543:1:exon
so has part: feature:1226645-1226741:1:exon
so has part: feature:1227485-1227529:1:exon
so has part: feature:1228745-1228932:1:exon
so has part: feature:1229772-1229881:1:exon
so has part: feature:1230002-1230071:1:exon
so has part: feature:1231039-1231112:1:exon
so has part: feature:1231248-1231338:1:exon
so has part: feature:1231732-1231872:1:exon
so has part: feature:1232214-1232362:1:exon
so has part: feature:1232789-1232966:1:exon
so has part: feature:1233275-1233316:1:exon
so has part: feature:1233478-1233583:1:exon
so has part: feature:1233916-1234155:1:exon
so has part: feature:1234484-1234570:1:exon
so has part: feature:1234752-1234783:1:exon

XP_030321269.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1221787-1222589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1224244-1224392:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1224943-1225055:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1225376-1225543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1226645-1226741:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1227485-1227529:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1228745-1228932:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1229772-1229881:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1230002-1230071:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1231039-1231112:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1231248-1231338:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1231732-1231872:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1232214-1232362:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1232789-1232966:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1233275-1233316:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1233478-1233583:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1233916-1234155:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1234484-1234570:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1234752-1234783:1:exon

DENND2C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: DENND2C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 2C isoform X2
translation: MHPTGSADSSFSRSAVQTLSRSHCRNIKQKISQWEGRTQGCSSKEKQQLKDFGVKYDPSCNALPKVKPEHTEKSRKNGSKDPKSLGLDFREDAQICLQTADSDDVKPCTCSPASQAKEKGECQAGSLDPGAPLPPENFYTFQAPWRRVVPLLTGKSPPVPSNLQLKCRNCGSTERELKGVDSLCRTERNLKNIYSEAEGQEEEPASVPPPKPRRTFRYLAEKGTSSCNNESTTREAPLQKQHGGDMLSSSNNPEKRTVSRRIKGRAQRKSFEFEDIQGFRNRMATSNSHRLREETNGTTGSRLIYTQSEDNIYEDIICPAKENHYEDIRALPLPLWKVPSVWKLPPSQSTSRAPKPPPKPPFLSFKSLELKPSQTSFQRKMVKDTALPVTLNEWKLFQAVEAASRRKNLPGLVLKIRDIFDSKRGKKRVKLLSPAGREASPMKGQHRCLLQVQSASKRNPHYQTLERDLIELQEQQLFELFVVVSLHKKASEVAYTPQIIQQFPSKTEHPFRQSKDTEERLKVIPKFCFPDPKDWFPASDLKSETFSFVLTGEDGSRWFGYCKKLLKGKGSVFLRSTASSAAWAASTSSPSCENLISTYKTFPEIAGDCIGEWRVVLTGSQILDEVEKRREMSPALVQPFMRSVMEAPFPAPGRTITVRSFLPGAGHKVMELRRPLDSRLEHVDFECLFKCLSVSHMIRVFASLLLERRVIFVADNLSTLSKCGHAAVATLYPFTWQHTYIPVLPSSMIDIVCSPTPFLIGILSCSLPQLRDLPIEEVLIVDLCADKFLQEVSDEDDILPHKLQAALVQILEERSEILSHEQSDTQGDMPLNSLVSEAFVQFFVEIVGHYSLHVTVTEKGERVFQWEPFRKSHVSRNVRHFLHFFMETQMFAGFVQDRELRKNMVKGLFEVRALEYLESISETEQPGMNKILRSLGNKMKFLRKR
SIO_010081: DENND2C
subclass of: SO_0000673
so part of: DENND2C
location: join(1221787..1222589,1224244..1224392,1224943..1225055,1225376..1225543,1226645..1226741,1228745..1228932,1229772..1229881,1230002..1230071,1231039..1231112,1231248..1231338,1231732..1231872,1232214..1232362,1232789..1232966,1233275..1233316,1233478..1233583,1233916..1234155,1234484..1234570,1234752..1234783)
location: region:1221787-1234783:1
so has part: feature:1221787-1222589:1:exon
so has part: feature:1224244-1224392:1:exon
so has part: feature:1224943-1225055:1:exon
so has part: feature:1225376-1225543:1:exon
so has part: feature:1226645-1226741:1:exon
so has part: feature:1228745-1228932:1:exon
so has part: feature:1229772-1229881:1:exon
so has part: feature:1230002-1230071:1:exon
so has part: feature:1231039-1231112:1:exon
so has part: feature:1231248-1231338:1:exon
so has part: feature:1231732-1231872:1:exon
so has part: feature:1232214-1232362:1:exon
so has part: feature:1232789-1232966:1:exon
so has part: feature:1233275-1233316:1:exon
so has part: feature:1233478-1233583:1:exon
so has part: feature:1233916-1234155:1:exon
so has part: feature:1234484-1234570:1:exon
so has part: feature:1234752-1234783:1:exon

XP_030321270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1221787-1222589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1224244-1224392:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1224943-1225055:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1225376-1225543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1226645-1226741:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1228745-1228932:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1229772-1229881:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1230002-1230071:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1231039-1231112:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1231248-1231338:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1231732-1231872:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1232214-1232362:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1232789-1232966:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1233275-1233316:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1233478-1233583:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1233916-1234155:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1234484-1234570:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1234752-1234783:1:exon

BCAS2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: BCAS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1235116..1238246
location: region:1235116-1238246:1
so has part: feature:1235116-1238246:1:exon
subclass of: SO_0000010

103525588
type: Gene
SIO_000068: ncbigene

position:1235116:1
position: 1235116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1238246:1
position: 1238246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1235116-1238246:1:exon

BCAS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: BCAS2
product: BCAS2 pre-mRNA processing factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 12 ESTs, 1 long SRA read, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030465450.1
SIO_010081: BCAS2
subclass of: SO_0000673
so part of: BCAS2
location: join(1235116..1235263,1235342..1235434,1235543..1235613,1235741..1235902,1236393..1236443,1237109..1237189,1238079..1238246)
location: region:1235116-1238246:1
so has part: feature:1235116-1235263:1:exon
so has part: feature:1235342-1235434:1:exon
so has part: feature:1235543-1235613:1:exon
so has part: feature:1235741-1235902:1:exon
so has part: feature:1236393-1236443:1:exon
so has part: feature:1237109-1237189:1:exon
so has part: feature:1238079-1238246:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1235116-1235263:1:exon

position:1235263:1
position: 1235263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1235342-1235434:1:exon

position:1235342:1
position: 1235342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1235434:1
position: 1235434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1235543-1235613:1:exon

position:1235543:1
position: 1235543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1235613:1
position: 1235613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1235741-1235902:1:exon

position:1235741:1
position: 1235741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1235902:1
position: 1235902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1236393-1236443:1:exon

position:1236393:1
position: 1236393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1236443:1
position: 1236443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1237109-1237189:1:exon

position:1237109:1
position: 1237109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1237189:1
position: 1237189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1238079-1238246:1:exon

position:1238079:1
position: 1238079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BCAS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: BCAS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor SPF27
translation: MAGPGLVAGDVVVDALPYFDQGYEAPGVREAAAALVEEETRRYRPTKNYLSYLPAHDYSAFETEIMRNEFERLAARQPLELLSMKRYELPAPSSGQKNDTTAWQECVNNSMAQLEHQAVRIENLELMSQHGCNAWKVYNEHLVHMIEQAQKELQKLRKNIQDLNWQRKNMQLTAGAKLREMESTWVSLVSKNYEIERTIVQLENEISQIKQQHGVANKENIQQDLQ
SIO_010081: BCAS2
subclass of: SO_0000673
so part of: BCAS2
location: join(1235171..1235263,1235342..1235434,1235543..1235613,1235741..1235902,1236393..1236443,1237109..1237189,1238079..1238208)
location: region:1235171-1238208:1
so has part: feature:1235171-1235263:1:exon
so has part: feature:1235342-1235434:1:exon
so has part: feature:1235543-1235613:1:exon
so has part: feature:1235741-1235902:1:exon
so has part: feature:1236393-1236443:1:exon
so has part: feature:1237109-1237189:1:exon
so has part: feature:1238079-1238208:1:exon

XP_030321310.1
type: Protein
SIO_000068: ncbiprotein

position:1235171:1
position: 1235171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1238208:1
position: 1238208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1235171-1235263:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1235342-1235434:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1235543-1235613:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1235741-1235902:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1236393-1236443:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1237109-1237189:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1238079-1238208:1:exon

TRIM33
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: TRIM33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1238763..1267062
location: region:1238763-1267062:1
so has part: feature:1238763-1267062:1:exon
subclass of: SO_0000010

103525608
type: Gene
SIO_000068: ncbigene

position:1238763:1
position: 1238763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1267062:1
position: 1267062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1238763-1267062:1:exon

TRIM33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TRIM33
product: tripartite motif containing 33
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 10 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030465455.1
SIO_010081: TRIM33
subclass of: SO_0000673
so part of: TRIM33
location: join(1238763..1239216,1244826..1244944,1245031..1245178,1246667..1246799,1249328..1249444,1250430..1250544,1251194..1251340,1251786..1251903,1252537..1252784,1253052..1253216,1254007..1254207,1255194..1255326,1255935..1255998,1256276..1256435,1257454..1257800,1258234..1258357,1259347..1259421,1259920..1260072,1261882..1261932,1262015..1267062)
location: region:1238763-1267062:1
so has part: feature:1238763-1239216:1:exon
so has part: feature:1244826-1244944:1:exon
so has part: feature:1245031-1245178:1:exon
so has part: feature:1246667-1246799:1:exon
so has part: feature:1249328-1249444:1:exon
so has part: feature:1250430-1250544:1:exon
so has part: feature:1251194-1251340:1:exon
so has part: feature:1251786-1251903:1:exon
so has part: feature:1252537-1252784:1:exon
so has part: feature:1253052-1253216:1:exon
so has part: feature:1254007-1254207:1:exon
so has part: feature:1255194-1255326:1:exon
so has part: feature:1255935-1255998:1:exon
so has part: feature:1256276-1256435:1:exon
so has part: feature:1257454-1257800:1:exon
so has part: feature:1258234-1258357:1:exon
so has part: feature:1259347-1259421:1:exon
so has part: feature:1259920-1260072:1:exon
so has part: feature:1261882-1261932:1:exon
so has part: feature:1262015-1267062:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1238763-1239216:1:exon

position:1239216:1
position: 1239216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1244826-1244944:1:exon

position:1244826:1
position: 1244826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1244944:1
position: 1244944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1245031-1245178:1:exon

position:1245031:1
position: 1245031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1245178:1
position: 1245178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1246667-1246799:1:exon

position:1246667:1
position: 1246667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1246799:1
position: 1246799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1249328-1249444:1:exon

position:1249328:1
position: 1249328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1249444:1
position: 1249444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1250430-1250544:1:exon

position:1250430:1
position: 1250430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1250544:1
position: 1250544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1251194-1251340:1:exon

position:1251194:1
position: 1251194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1251340:1
position: 1251340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1251786-1251903:1:exon

position:1251786:1
position: 1251786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1251903:1
position: 1251903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1252537-1252784:1:exon

position:1252537:1
position: 1252537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1252784:1
position: 1252784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1253052-1253216:1:exon

position:1253052:1
position: 1253052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1253216:1
position: 1253216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1254007-1254207:1:exon

position:1254007:1
position: 1254007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1254207:1
position: 1254207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1255194-1255326:1:exon

position:1255194:1
position: 1255194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1255326:1
position: 1255326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1255935-1255998:1:exon

position:1255935:1
position: 1255935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1255998:1
position: 1255998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1256276-1256435:1:exon

position:1256276:1
position: 1256276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1256435:1
position: 1256435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1257454-1257800:1:exon

position:1257454:1
position: 1257454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1257800:1
position: 1257800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1258234-1258357:1:exon

position:1258234:1
position: 1258234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1258357:1
position: 1258357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1259347-1259421:1:exon

position:1259347:1
position: 1259347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1259421:1
position: 1259421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1259920-1260072:1:exon

position:1259920:1
position: 1259920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1260072:1
position: 1260072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1261882-1261932:1:exon

position:1261882:1
position: 1261882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1261932:1
position: 1261932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1262015-1267062:1:exon

position:1262015:1
position: 1262015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRIM33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TRIM33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM33
translation: MAENKGGGGGGEGAAEAAPGGGGVPEPVAASPSGPAPPAPVAAPPEERESPGVAAAERGLGEAEAEAAAGPGAAPGLGPGPSPVPPLTPAAPGPFSLLDTCAVCAQSLQSRREAEPKLLPCLHSFCRRCLPEPERQLSVPVPGGANGDVQQVGVIRCPVCRQECRQIDLVDNYFVKDTSETPSSSDEKSEQVCTSCEDNASAVGFCVECGEWLCKTCIEAHQRVKFTKDHMIRKKEDVSSEAVGASGQRPVFCPVHKQEQLKLFCETCDRLTCRDCQLLEHKEHRYQFLEEAFQNQKGAIENLLVKLLEKKNYVNFAAAQVQNRIKEVNETNKRVEQEIKVAIFTLINEINKKGKSLLQHLENVTKERQMKLMQQQNDITGLSRQVKHVMNFTNWAIASGSSTALLYSKRLITFQLRHILKARCDPVPAANGAIRFHCDPTFWAKNVVNLGNLVIENKPTPSYTPNVVVGQTPPGTNHVSKAPGQINLAQLRLQHMQQQVYAQKHQQLQQQMRVGQPAASVPRQSSPQVLQQQPPRLISMQTMQRGNMNCGAFQAHQMRMAQNAARIPGIPRHNGPQYSMMQPHLQRQHSNPGHAGPFPVVSVHNTTINPTSPTTATMANANRGPTSPSVTSIELIPSVTNPENLPSLPDIPPIQLEDAGSSNLDNLLSRYITGSHLPPQPTSTMNPSPGPSALSPGSSGLPNSHTPVRPPSTSSTGSRGSCGSSGRTAEKTSINFKSDQVKVKQEPGTEEEICSFSGTVKQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESELDTLGNLENHVKTEPTDLSESCKQSGHSLLNGKSPVRSLMHRSARIGGEGINKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGEWICTFCRDLSKPEVEYDCDNSQHSKKGKTAQGLSPVDQRKCERLLLYLYCHELSIEFQEPVPASIPNYYKIIKKPMDLSTVKKKLQKKHSQHYQTPEDFVADVRLIFKNCERFNEMMKVVQVYAETQEINLKADSEVAQAGKAVALYFEDKLTEIYPDRTFQPLPEFEQEEDDGEITEDSDEDFIQPRRKRLKSDERPVHIK
SIO_010081: TRIM33
subclass of: SO_0000673
so part of: TRIM33
location: join(1238763..1239216,1244826..1244944,1245031..1245178,1246667..1246799,1249328..1249444,1250430..1250544,1251194..1251340,1251786..1251903,1252537..1252784,1253052..1253216,1254007..1254207,1255194..1255326,1255935..1255998,1256276..1256435,1257454..1257800,1258234..1258357,1259347..1259421,1259920..1260072,1261882..1261932,1262015..1262227)
location: region:1238763-1262227:1
so has part: feature:1238763-1239216:1:exon
so has part: feature:1244826-1244944:1:exon
so has part: feature:1245031-1245178:1:exon
so has part: feature:1246667-1246799:1:exon
so has part: feature:1249328-1249444:1:exon
so has part: feature:1250430-1250544:1:exon
so has part: feature:1251194-1251340:1:exon
so has part: feature:1251786-1251903:1:exon
so has part: feature:1252537-1252784:1:exon
so has part: feature:1253052-1253216:1:exon
so has part: feature:1254007-1254207:1:exon
so has part: feature:1255194-1255326:1:exon
so has part: feature:1255935-1255998:1:exon
so has part: feature:1256276-1256435:1:exon
so has part: feature:1257454-1257800:1:exon
so has part: feature:1258234-1258357:1:exon
so has part: feature:1259347-1259421:1:exon
so has part: feature:1259920-1260072:1:exon
so has part: feature:1261882-1261932:1:exon
so has part: feature:1262015-1262227:1:exon

XP_030321315.1
type: Protein
SIO_000068: ncbiprotein

position:1262227:1
position: 1262227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1238763-1239216:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1244826-1244944:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1245031-1245178:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1246667-1246799:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1249328-1249444:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1250430-1250544:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1251194-1251340:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1251786-1251903:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1252537-1252784:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1253052-1253216:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1254007-1254207:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1255194-1255326:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1255935-1255998:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1256276-1256435:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1257454-1257800:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1258234-1258357:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1259347-1259421:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1259920-1260072:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1261882-1261932:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1262015-1262227:1:exon

SYT6
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SYT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1275032..1301386
location: region:1275032-1301386:1
so has part: feature:1275032-1301386:1:exon
subclass of: SO_0000010

103525589
type: Gene
SIO_000068: ncbigene

position:1275032:1
position: 1275032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1301386:1
position: 1301386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1275032-1301386:1:exon

SYT6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SYT6
product: synaptotagmin 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 47% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008490549.2
SIO_010081: SYT6
subclass of: SO_0000673
so part of: SYT6
location: join(1275032..1275185,1289640..1289976,1291692..1292250,1294990..1295110,1296823..1296994,1297503..1297653,1301304..1301386)
location: region:1275032-1301386:1
so has part: feature:1275032-1275185:1:exon
so has part: feature:1289640-1289976:1:exon
so has part: feature:1291692-1292250:1:exon
so has part: feature:1294990-1295110:1:exon
so has part: feature:1296823-1296994:1:exon
so has part: feature:1297503-1297653:1:exon
so has part: feature:1301304-1301386:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1275032-1275185:1:exon

position:1275185:1
position: 1275185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1289640-1289976:1:exon

position:1289640:1
position: 1289640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1289976:1
position: 1289976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1291692-1292250:1:exon

position:1291692:1
position: 1291692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1292250:1
position: 1292250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1294990-1295110:1:exon

position:1294990:1
position: 1294990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1295110:1
position: 1295110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1296823-1296994:1:exon

position:1296823:1
position: 1296823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1296994:1
position: 1296994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1297503-1297653:1:exon

position:1297503:1
position: 1297503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1297653:1
position: 1297653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1301304-1301386:1:exon

position:1301304:1
position: 1301304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SYT6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SYT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-6
translation: MSGARDHSRCQRAVHIVTELCQKKSLPSLDLDTCREFLLLPSDQSLIIAEPELSISLLAVIVVVCGLALVAVFLFLFWKLCWVPWRNKALSSSLAALQHQAGCNKESMADKLKDAGAISFLEAAVKISHTSPDIPAEVQMSMKEHLMRRTRIQRQTTEPASSTRHISFKRHLPRQMHVSSMDYGMDSPAVAEQPTSIGRIKPELYKQKSVDSEDTKKEAAKTCGKINFTLKYDYENETLTVRILRAFDLPAKDFCGSSDPYVKIYLLPDRKRKFQTRVHRKTLNPTFDESFHFPVPHEELAGRKLHLSVFDFDRFSRHDMIGEVILENLFEASDLSRETSIWKDIQYATTESVDLGEIMFSLCYLPTAGRLTLTVIKCRNLKAMDITGYSDPYVKVSLLCDGRRLKKKKTTIKKNTLNPTYNEAIIFDIPPENMDQVSLLISVMDYDRVGHNEIIGVCRVGVNAEGLGRDHWNEMLAYPRKPIAHWHPLVEVKKSFKEWHGRAASFDSQGSCPSPKPPPTP
SIO_010081: SYT6
subclass of: SO_0000673
so part of: SYT6
location: join(1275032..1275185,1289640..1289976,1291692..1292250,1294990..1295110,1296823..1296994,1297503..1297653,1301304..1301375)
location: region:1275032-1301375:1
so has part: feature:1275032-1275185:1:exon
so has part: feature:1289640-1289976:1:exon
so has part: feature:1291692-1292250:1:exon
so has part: feature:1294990-1295110:1:exon
so has part: feature:1296823-1296994:1:exon
so has part: feature:1297503-1297653:1:exon
so has part: feature:1301304-1301375:1:exon

XP_008488771.1
type: Protein
SIO_000068: ncbiprotein

position:1301375:1
position: 1301375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1275032-1275185:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1289640-1289976:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1291692-1292250:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1294990-1295110:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1296823-1296994:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1297503-1297653:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1301304-1301375:1:exon

OLFML3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: OLFML3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1310980..1313166)
location: region:1310980-1313166:-1
so has part: feature:1310980-1313166:-1:exon
subclass of: SO_0000010

103525609
type: Gene
SIO_000068: ncbigene

position:1310980:-1
position: 1310980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1313166:-1
position: 1313166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1310980-1313166:-1:exon

OLFML3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: OLFML3
product: olfactomedin like 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 13 ESTs, 1 long SRA read, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030465467.1
SIO_010081: OLFML3
subclass of: SO_0000673
so part of: OLFML3
location: complement(join(1310980..1311852,1312185..1312470,1312797..1313166))
location: region:1310980-1313166:-1
so has part: feature:1312797-1313166:-1:exon
so has part: feature:1312185-1312470:-1:exon
so has part: feature:1310980-1311852:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1312797-1313166:-1:exon

position:1312797:-1
position: 1312797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1312185-1312470:-1:exon

position:1312185:-1
position: 1312185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1312470:-1
position: 1312470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1310980-1311852:-1:exon

position:1311852:-1
position: 1311852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OLFML3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: OLFML3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactomedin-like protein 3
translation: MGPWRCLLLLPLLAAAQQQQFMEYMERRLALLEERISQWHDQSSRYSTELRDFKNQVLGMLEAAEKEREAMRSEAENAAVRVDRLEREVDYLETQNPAPPCVEVDETLMEKQVAMAKKRKNEKYTKVTDCSDTIASIRAMKIQKRFGSTSGLWTKDAAGNSEKIYVFDGTSNDTVYVFPRLREFTLYSATRKAARIKLPYPWAGTGHLIYDGHLYYIRQQGSFQVIKFNLANKTVVDSSVFPAEEQIPVFGLSPFTYIEVAADEEGLWAIYATKEDEKNICLAKLDPTSLDIEQMWDTPCPRENAEGAFVVCGALHVVYNTRLPSRSRVQCVFDVSGTLAPEDASLIYFPKRYGSHSSMKYSPRERQIYAWDDGYQIIYRMEMKKKLEV
SIO_010081: OLFML3
subclass of: SO_0000673
so part of: OLFML3
location: complement(join(1311068..1311852,1312185..1312470,1312797..1312895))
location: region:1311068-1312895:-1
so has part: feature:1312797-1312895:-1:exon
so has part: feature:1312185-1312470:-1:exon
so has part: feature:1311068-1311852:-1:exon

XP_030321327.1
type: Protein
SIO_000068: ncbiprotein

position:1311068:-1
position: 1311068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1312895:-1
position: 1312895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1312797-1312895:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1312185-1312470:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1311068-1311852:-1:exon

HIPK1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: HIPK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1313681..1336618)
location: region:1313681-1336618:-1
so has part: feature:1313681-1336618:-1:exon
subclass of: SO_0000010

103525590
type: Gene
SIO_000068: ncbigene

position:1313681:-1
position: 1313681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1336618:-1
position: 1336618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1313681-1336618:-1:exon

HIPK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: HIPK1
product: homeodomain interacting protein kinase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 31 ESTs, 1 long SRA read, 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030465343.1
SIO_010081: HIPK1
subclass of: SO_0000673
so part of: HIPK1
location: complement(join(1313681..1318293,1318925..1319061,1319421..1319659,1319939..1320154,1320375..1320557,1320703..1320845,1324525..1324646,1325528..1325750,1326144..1326306,1326606..1326790,1327152..1327238,1327972..1328091,1329984..1330107,1334630..1335707,1336349..1336618))
location: region:1313681-1336618:-1
so has part: feature:1336349-1336618:-1:exon
so has part: feature:1334630-1335707:-1:exon
so has part: feature:1329984-1330107:-1:exon
so has part: feature:1327972-1328091:-1:exon
so has part: feature:1327152-1327238:-1:exon
so has part: feature:1326606-1326790:-1:exon
so has part: feature:1326144-1326306:-1:exon
so has part: feature:1325528-1325750:-1:exon
so has part: feature:1324525-1324646:-1:exon
so has part: feature:1320703-1320845:-1:exon
so has part: feature:1320375-1320557:-1:exon
so has part: feature:1319939-1320154:-1:exon
so has part: feature:1319421-1319659:-1:exon
so has part: feature:1318925-1319061:-1:exon
so has part: feature:1313681-1318293:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1336349-1336618:-1:exon

position:1336349:-1
position: 1336349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1334630-1335707:-1:exon

position:1334630:-1
position: 1334630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1335707:-1
position: 1335707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1329984-1330107:-1:exon

position:1329984:-1
position: 1329984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1330107:-1
position: 1330107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1327972-1328091:-1:exon

position:1327972:-1
position: 1327972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1328091:-1
position: 1328091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1327152-1327238:-1:exon

position:1327152:-1
position: 1327152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1327238:-1
position: 1327238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1326606-1326790:-1:exon

position:1326606:-1
position: 1326606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1326790:-1
position: 1326790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1326144-1326306:-1:exon

position:1326144:-1
position: 1326144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1326306:-1
position: 1326306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1325528-1325750:-1:exon

position:1325528:-1
position: 1325528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1325750:-1
position: 1325750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1324525-1324646:-1:exon

position:1324525:-1
position: 1324525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1324646:-1
position: 1324646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1320703-1320845:-1:exon

position:1320703:-1
position: 1320703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1320845:-1
position: 1320845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1320375-1320557:-1:exon

position:1320375:-1
position: 1320375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1320557:-1
position: 1320557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1319939-1320154:-1:exon

position:1319939:-1
position: 1319939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1320154:-1
position: 1320154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1319421-1319659:-1:exon

position:1319421:-1
position: 1319421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1319659:-1
position: 1319659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1318925-1319061:-1:exon

position:1318925:-1
position: 1318925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1319061:-1
position: 1319061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1313681-1318293:-1:exon

position:1318293:-1
position: 1318293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HIPK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: HIPK1
product: homeodomain interacting protein kinase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 29 ESTs, 1 long SRA read, 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030465342.1
SIO_010081: HIPK1
subclass of: SO_0000673
so part of: HIPK1
location: complement(join(1313681..1318293,1318925..1319061,1319421..1319659,1319939..1320154,1320375..1320557,1320703..1320842,1323394..1323528,1324525..1324646,1325528..1325750,1326144..1326306,1326606..1326790,1327152..1327238,1327972..1328091,1329984..1330107,1334630..1335707,1336349..1336618))
location: region:1313681-1336618:-1
so has part: feature:1336349-1336618:-1:exon
so has part: feature:1334630-1335707:-1:exon
so has part: feature:1329984-1330107:-1:exon
so has part: feature:1327972-1328091:-1:exon
so has part: feature:1327152-1327238:-1:exon
so has part: feature:1326606-1326790:-1:exon
so has part: feature:1326144-1326306:-1:exon
so has part: feature:1325528-1325750:-1:exon
so has part: feature:1324525-1324646:-1:exon
so has part: feature:1323394-1323528:-1:exon
so has part: feature:1320703-1320842:-1:exon
so has part: feature:1320375-1320557:-1:exon
so has part: feature:1319939-1320154:-1:exon
so has part: feature:1319421-1319659:-1:exon
so has part: feature:1318925-1319061:-1:exon
so has part: feature:1313681-1318293:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1336349-1336618:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1334630-1335707:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1329984-1330107:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1327972-1328091:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1327152-1327238:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1326606-1326790:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1326144-1326306:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1325528-1325750:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1324525-1324646:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1323394-1323528:-1:exon

position:1323394:-1
position: 1323394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1323528:-1
position: 1323528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1320703-1320842:-1:exon

position:1320842:-1
position: 1320842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1320375-1320557:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1319939-1320154:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1319421-1319659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1318925-1319061:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1313681-1318293:-1:exon

HIPK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: HIPK1
product: homeodomain interacting protein kinase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 29 ESTs, 5 long SRA reads, 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030465341.1
SIO_010081: HIPK1
subclass of: SO_0000673
so part of: HIPK1
location: complement(join(1313681..1318293,1318925..1319061,1319421..1319659,1319939..1320154,1320375..1320557,1320703..1320845,1323394..1323528,1324525..1324646,1325528..1325750,1326144..1326306,1326606..1326790,1327152..1327238,1327972..1328091,1329984..1330107,1334630..1335707,1336349..1336618))
location: region:1313681-1336618:-1
so has part: feature:1336349-1336618:-1:exon
so has part: feature:1334630-1335707:-1:exon
so has part: feature:1329984-1330107:-1:exon
so has part: feature:1327972-1328091:-1:exon
so has part: feature:1327152-1327238:-1:exon
so has part: feature:1326606-1326790:-1:exon
so has part: feature:1326144-1326306:-1:exon
so has part: feature:1325528-1325750:-1:exon
so has part: feature:1324525-1324646:-1:exon
so has part: feature:1323394-1323528:-1:exon
so has part: feature:1320703-1320845:-1:exon
so has part: feature:1320375-1320557:-1:exon
so has part: feature:1319939-1320154:-1:exon
so has part: feature:1319421-1319659:-1:exon
so has part: feature:1318925-1319061:-1:exon
so has part: feature:1313681-1318293:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1336349-1336618:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1334630-1335707:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1329984-1330107:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1327972-1328091:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1327152-1327238:-1:exon

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SIO_000300: 6
SIO_000628: feature:1326606-1326790:-1:exon

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SIO_000300: 7
SIO_000628: feature:1326144-1326306:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1325528-1325750:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1324525-1324646:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1323394-1323528:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1320703-1320845:-1:exon