Calypte anna isolate BGI_N300 chromosome 24, bCalAnn1_v1.p, whole genome shotgun sequence.
type: Entry
definition: Calypte anna isolate BGI_N300 chromosome 24, bCalAnn1_v1.p, whole genome shotgun sequence.
sequence version: NC_044269.1
sequence date: 2019-08-24
sequence: sequence
division: CON
label: NC_044269.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA558503
dblink: SAMN02265252
keyword: WGS
keyword: RefSeq
source: Calypte anna (Anna's hummingbird)
organism: Calypte anna
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Apodiformes; Trochilidae; Calypte.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM012136.1.\nAssembly name: bCalAnn1_v1.p\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2019/05/16. The original whole-genome shotgun project has the\naccession RRCD00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 26-SEP-2018\nAssembly Method :: FALCON v. 5.1.1; FALCON unzip v. 1.0.2;\n scaff10X v. git 4.28.2018; Bionano Solve\n DLS v. 3.2.1; Salsa2 HiC v. 2.0;\n smrtanalysis Arrow polishing & gap\n filling v. 5.1.0.26412; longranger align\n v. 2.2.2; freebayes v. 1.2.0;\n purge_haplotigs v. bit 7.10.2018; gEVAL\n manual curation v. 2018-09-07\nAssembly Name :: bCalAnn1_v1.p\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 54.0x\nSequencing Technology :: PacBio RSII; 10X Genomics linked reads;\n Bionano Genomics DLS; Arima Genomics HiC\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Calypte anna Annotation Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 6461084
topology: linear
so has quality: SO_0000987
location: 1..6461084
location: region:1-6461084:1
RO_0002162: 9244

NC_044269
type: RefSeq
SIO_000068: refseq

PRJNA558503
type: BioProject
SIO_000068: bioproject

SAMN02265252
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6461084:1
position: 6461084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-6461084:1:source
so part of: sequence
organism: Calypte anna
mol type: genomic DNA
isolate: BGI_N300
chromosome: 24
sex: female
country: USA

9244
type: Taxonomy
SIO_000068: taxonomy

LOC115599623
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599623
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(892..3422)
location: region:892-3422:-1
so has part: feature:892-3422:-1:exon
subclass of: SO_0000011

115599623
type: Gene
SIO_000068: ncbigene

position:892:-1
position: 892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3422:-1
position: 3422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:892-3422:-1:exon

LOC115599623
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599623
product: uncharacterized LOC115599623, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988544.1
SIO_010081: LOC115599623
subclass of: SO_0000673
so part of: LOC115599623
location: complement(join(892..1006,1092..1125,2185..2333,3343..3422))
location: region:892-3422:-1
so has part: feature:3343-3422:-1:exon
so has part: feature:2185-2333:-1:exon
so has part: feature:1092-1125:-1:exon
so has part: feature:892-1006:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3343-3422:-1:exon

position:3343:-1
position: 3343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2185-2333:-1:exon

position:2185:-1
position: 2185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2333:-1
position: 2333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1092-1125:-1:exon

position:1092:-1
position: 1092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1125:-1
position: 1125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:892-1006:-1:exon

position:1006:-1
position: 1006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115599623
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599623
product: uncharacterized LOC115599623, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003988543.1
SIO_010081: LOC115599623
subclass of: SO_0000673
so part of: LOC115599623
location: complement(join(1063..1125,2185..2333,3343..3422))
location: region:1063-3422:-1
so has part: feature:3343-3422:-1:exon
so has part: feature:2185-2333:-1:exon
so has part: feature:1063-1125:-1:exon

position:1063:-1
position: 1063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3343-3422:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2185-2333:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1063-1125:-1:exon

ST14
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ST14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(16469..40408)
location: region:16469-40408:-1
so has part: feature:16469-40408:-1:exon
subclass of: SO_0000010

103532742
type: Gene
SIO_000068: ncbigene

position:16469:-1
position: 16469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40408:-1
position: 40408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16469-40408:-1:exon

ST14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ST14
product: suppression of tumorigenicity 14, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464910.1
SIO_010081: ST14
subclass of: SO_0000673
so part of: ST14
location: complement(join(16469..17457,19068..19204,20086..20360,20520..20706,21181..21315,22180..22293,22519..22626,23877..23981,24666..24796,25543..25652,26154..26251,26665..26804,26957..27194,27515..27550,27891..28051,28466..28536,28911..29038,29147..29306,39790..40408))
location: region:16469-40408:-1
so has part: feature:39790-40408:-1:exon
so has part: feature:29147-29306:-1:exon
so has part: feature:28911-29038:-1:exon
so has part: feature:28466-28536:-1:exon
so has part: feature:27891-28051:-1:exon
so has part: feature:27515-27550:-1:exon
so has part: feature:26957-27194:-1:exon
so has part: feature:26665-26804:-1:exon
so has part: feature:26154-26251:-1:exon
so has part: feature:25543-25652:-1:exon
so has part: feature:24666-24796:-1:exon
so has part: feature:23877-23981:-1:exon
so has part: feature:22519-22626:-1:exon
so has part: feature:22180-22293:-1:exon
so has part: feature:21181-21315:-1:exon
so has part: feature:20520-20706:-1:exon
so has part: feature:20086-20360:-1:exon
so has part: feature:19068-19204:-1:exon
so has part: feature:16469-17457:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39790-40408:-1:exon

position:39790:-1
position: 39790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:29147-29306:-1:exon

position:29147:-1
position: 29147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29306:-1
position: 29306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:28911-29038:-1:exon

position:28911:-1
position: 28911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29038:-1
position: 29038
reference: sequence
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urn:…
SIO_000300: 4
SIO_000628: feature:28466-28536:-1:exon

position:28466:-1
position: 28466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28536:-1
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reference: sequence
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type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:27891-28051:-1:exon

position:27891:-1
position: 27891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28051:-1
position: 28051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:27515-27550:-1:exon

position:27515:-1
position: 27515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27550:-1
position: 27550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:26957-27194:-1:exon

position:26957:-1
position: 26957
reference: sequence
type: ReverseStrandPosition
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position:27194:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:26665-26804:-1:exon

position:26665:-1
position: 26665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26804:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:26154-26251:-1:exon

position:26154:-1
position: 26154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26251:-1
position: 26251
reference: sequence
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urn:…
SIO_000300: 10
SIO_000628: feature:25543-25652:-1:exon

position:25543:-1
position: 25543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25652:-1
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reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:24666-24796:-1:exon

position:24666:-1
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reference: sequence
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position:24796:-1
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reference: sequence
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urn:…
SIO_000300: 12
SIO_000628: feature:23877-23981:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 13
SIO_000628: feature:22519-22626:-1:exon

position:22519:-1
position: 22519
reference: sequence
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position:22626:-1
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reference: sequence
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urn:…
SIO_000300: 14
SIO_000628: feature:22180-22293:-1:exon

position:22180:-1
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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 15
SIO_000628: feature:21181-21315:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 16
SIO_000628: feature:20520-20706:-1:exon

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reference: sequence
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position:20706:-1
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reference: sequence
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urn:…
SIO_000300: 17
SIO_000628: feature:20086-20360:-1:exon

position:20086:-1
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reference: sequence
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position:20360:-1
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reference: sequence
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urn:…
SIO_000300: 18
SIO_000628: feature:19068-19204:-1:exon

position:19068:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19204:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 19
SIO_000628: feature:16469-17457:-1:exon

position:17457:-1
position: 17457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ST14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ST14
product: suppression of tumorigenicity 14, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464911.1
SIO_010081: ST14
subclass of: SO_0000673
so part of: ST14
location: complement(join(16469..17457,19068..19204,20086..20360,20520..20706,21181..21315,22180..22293,22519..22626,23877..23981,24666..24796,25543..25652,26154..26251,26665..26804,26957..27194,27515..27550,27891..28051,28466..28536,28911..29038,29147..29306,38162..38260))
location: region:16469-38260:-1
so has part: feature:38162-38260:-1:exon
so has part: feature:29147-29306:-1:exon
so has part: feature:28911-29038:-1:exon
so has part: feature:28466-28536:-1:exon
so has part: feature:27891-28051:-1:exon
so has part: feature:27515-27550:-1:exon
so has part: feature:26957-27194:-1:exon
so has part: feature:26665-26804:-1:exon
so has part: feature:26154-26251:-1:exon
so has part: feature:25543-25652:-1:exon
so has part: feature:24666-24796:-1:exon
so has part: feature:23877-23981:-1:exon
so has part: feature:22519-22626:-1:exon
so has part: feature:22180-22293:-1:exon
so has part: feature:21181-21315:-1:exon
so has part: feature:20520-20706:-1:exon
so has part: feature:20086-20360:-1:exon
so has part: feature:19068-19204:-1:exon
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position:38260:-1
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reference: sequence
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type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38162-38260:-1:exon

position:38162:-1
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reference: sequence
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urn:…
SIO_000300: 2
SIO_000628: feature:29147-29306:-1:exon

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SIO_000300: 3
SIO_000628: feature:28911-29038:-1:exon

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SIO_000300: 4
SIO_000628: feature:28466-28536:-1:exon

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SIO_000300: 5
SIO_000628: feature:27891-28051:-1:exon

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SIO_000300: 6
SIO_000628: feature:27515-27550:-1:exon

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SIO_000300: 7
SIO_000628: feature:26957-27194:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:26665-26804:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:26154-26251:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:25543-25652:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:24666-24796:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:23877-23981:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:22519-22626:-1:exon

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SIO_000300: 14
SIO_000628: feature:22180-22293:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:21181-21315:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:20520-20706:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:20086-20360:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:19068-19204:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:16469-17457:-1:exon

ST14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ST14
product: suppression of tumorigenicity 14, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464909.1
SIO_010081: ST14
subclass of: SO_0000673
so part of: ST14
location: complement(join(16469..17457,19068..19204,20086..20360,20520..20706,21181..21315,22180..22293,22519..22626,23877..23981,24666..24796,25543..25652,26154..26251,26665..26804,26957..27194,27515..27550,27891..28051,28466..28536,28911..29038,29147..29306,36620..36782))
location: region:16469-36782:-1
so has part: feature:36620-36782:-1:exon
so has part: feature:29147-29306:-1:exon
so has part: feature:28911-29038:-1:exon
so has part: feature:28466-28536:-1:exon
so has part: feature:27891-28051:-1:exon
so has part: feature:27515-27550:-1:exon
so has part: feature:26957-27194:-1:exon
so has part: feature:26665-26804:-1:exon
so has part: feature:26154-26251:-1:exon
so has part: feature:25543-25652:-1:exon
so has part: feature:24666-24796:-1:exon
so has part: feature:23877-23981:-1:exon
so has part: feature:22519-22626:-1:exon
so has part: feature:22180-22293:-1:exon
so has part: feature:21181-21315:-1:exon
so has part: feature:20520-20706:-1:exon
so has part: feature:20086-20360:-1:exon
so has part: feature:19068-19204:-1:exon
so has part: feature:16469-17457:-1:exon

position:36782:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36620-36782:-1:exon

position:36620:-1
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reference: sequence
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urn:…
SIO_000300: 2
SIO_000628: feature:29147-29306:-1:exon

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SIO_000300: 3
SIO_000628: feature:28911-29038:-1:exon

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SIO_000300: 4
SIO_000628: feature:28466-28536:-1:exon

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SIO_000300: 6
SIO_000628: feature:27515-27550:-1:exon

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SIO_000300: 7
SIO_000628: feature:26957-27194:-1:exon

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SIO_000300: 8
SIO_000628: feature:26665-26804:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:26154-26251:-1:exon

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SIO_000300: 10
SIO_000628: feature:25543-25652:-1:exon

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SIO_000300: 11
SIO_000628: feature:24666-24796:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:23877-23981:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:22519-22626:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:22180-22293:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:21181-21315:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:20520-20706:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:20086-20360:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:19068-19204:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:16469-17457:-1:exon

ST14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ST14
product: suppression of tumorigenicity 14, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464913.1
SIO_010081: ST14
subclass of: SO_0000673
so part of: ST14
location: complement(join(16469..17457,19068..19204,20086..20360,20520..20706,21181..21315,22180..22293,22519..22626,23877..23981,24666..24796,25543..25652,26154..26251,26665..26804,26957..27194,27515..27550,27891..28051,28466..28536,28911..29038,29147..29306,36639..36657))
location: region:16469-36657:-1
so has part: feature:36639-36657:-1:exon
so has part: feature:29147-29306:-1:exon
so has part: feature:28911-29038:-1:exon
so has part: feature:28466-28536:-1:exon
so has part: feature:27891-28051:-1:exon
so has part: feature:27515-27550:-1:exon
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so has part: feature:26665-26804:-1:exon
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so has part: feature:25543-25652:-1:exon
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so has part: feature:23877-23981:-1:exon
so has part: feature:22519-22626:-1:exon
so has part: feature:22180-22293:-1:exon
so has part: feature:21181-21315:-1:exon
so has part: feature:20520-20706:-1:exon
so has part: feature:20086-20360:-1:exon
so has part: feature:19068-19204:-1:exon
so has part: feature:16469-17457:-1:exon

position:36657:-1
position: 36657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36639-36657:-1:exon

position:36639:-1
position: 36639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:29147-29306:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:28911-29038:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:28466-28536:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27891-28051:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:27515-27550:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:26957-27194:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:26665-26804:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:26154-26251:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:25543-25652:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:24666-24796:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:23877-23981:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:22519-22626:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:22180-22293:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:21181-21315:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:20520-20706:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:20086-20360:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:19068-19204:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:16469-17457:-1:exon

ST14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ST14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of tumorigenicity 14 protein isoform X1
translation: MERGPTDAAGMRYSSKGQDMNHLEEGVEFLPAMNSKKMEKRGPRRRVVISVLILVFLLISLLTGLLVWHFKYRNAPVQKVFNGHLRVLNWDFLDAYENSSSPEFLMLAKKVKSTVEEIYRNHPDIGPYHKETVITAFSEGSVIAYYWSEFLVPKYREESLDRAMADKQSLVQRWNPRLRNPMLKVESVVAFPADPSIANSARDYSCMFALHAKEGEVTSFTTPGFPNSPYPNNALCYWALRADANSIISLTFRTLELEECRDDSDYIKVYNSLSPVEPHALVRLCGNYAPSYNLTFLSSQNVMLVTLVTNKEGRFPGFKAEFFQLPKVTACGGTLKGESGSFTTPFYPAHYPPLMDCVWNIEVPSQKNVKVRFNTFFVLEPGIPITSCTKDYVQINSTRYCGERSQFVVASSTNKIEVKFFSDQSYTDTGFSAEYLSYDSSDPCPGKFTCNTGRCIDRRMRCDGWLDCVDGSDERSCTCTEQQFRCQNGWCKPKFWVCDNVNDCGDNSDELQCSCSAGSFKCNNGKCIPSSQECDGQDDCGDGTDEGTCSPGKDVPPAVTCKEHTYKCRDGRCISKQNPECDGEQDCEDNSDEENCNCGLRSYVRKSRIVGGQNSDVGEWPWQVSLHVKGQGHICGASLISESWLVSAAHCFLQLQGIRYADPSLWTAYLGLTDQGHLDGPNVQMRKIKRIISHPHFNDYTYDYDIAVMELQTPVTFSSVVQPICLPDVTHTFPVGKDLWVTGWGATVEGGTGAPILQKAEIRLINQTVCNELLTDQLTPRMMCVGILSGGVDACQGDSGGPLVSVEPSTRMFLAGVVSWGDGCAQRNKPGVYSRLTSLRPWLQQQTGL
SIO_010081: ST14
subclass of: SO_0000673
so part of: ST14
location: complement(join(17296..17457,19068..19204,20086..20360,20520..20706,21181..21315,22180..22293,22519..22626,23877..23981,24666..24796,25543..25652,26154..26251,26665..26804,26957..27194,27515..27550,27891..28051,28466..28536,28911..29038,29147..29306,36620..36673))
location: region:17296-36673:-1
so has part: feature:36620-36673:-1:exon
so has part: feature:29147-29306:-1:exon
so has part: feature:28911-29038:-1:exon
so has part: feature:28466-28536:-1:exon
so has part: feature:27891-28051:-1:exon
so has part: feature:27515-27550:-1:exon
so has part: feature:26957-27194:-1:exon
so has part: feature:26665-26804:-1:exon
so has part: feature:26154-26251:-1:exon
so has part: feature:25543-25652:-1:exon
so has part: feature:24666-24796:-1:exon
so has part: feature:23877-23981:-1:exon
so has part: feature:22519-22626:-1:exon
so has part: feature:22180-22293:-1:exon
so has part: feature:21181-21315:-1:exon
so has part: feature:20520-20706:-1:exon
so has part: feature:20086-20360:-1:exon
so has part: feature:19068-19204:-1:exon
so has part: feature:17296-17457:-1:exon

XP_030320769.1
type: Protein
SIO_000068: ncbiprotein

position:17296:-1
position: 17296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36673:-1
position: 36673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36620-36673:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29147-29306:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:28911-29038:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:28466-28536:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27891-28051:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:27515-27550:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:26957-27194:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:26665-26804:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:26154-26251:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:25543-25652:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:24666-24796:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:23877-23981:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:22519-22626:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:22180-22293:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:21181-21315:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:20520-20706:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:20086-20360:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:19068-19204:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:17296-17457:-1:exon

ST14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ST14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of tumorigenicity 14 protein isoform X2
translation: MNHLEEGVEFLPAMNSKKMEKRGPRRRVVISVLILVFLLISLLTGLLVWHFKYRNAPVQKVFNGHLRVLNWDFLDAYENSSSPEFLMLAKKVKSTVEEIYRNHPDIGPYHKETVITAFSEGSVIAYYWSEFLVPKYREESLDRAMADKQSLVQRWNPRLRNPMLKVESVVAFPADPSIANSARDYSCMFALHAKEGEVTSFTTPGFPNSPYPNNALCYWALRADANSIISLTFRTLELEECRDDSDYIKVYNSLSPVEPHALVRLCGNYAPSYNLTFLSSQNVMLVTLVTNKEGRFPGFKAEFFQLPKVTACGGTLKGESGSFTTPFYPAHYPPLMDCVWNIEVPSQKNVKVRFNTFFVLEPGIPITSCTKDYVQINSTRYCGERSQFVVASSTNKIEVKFFSDQSYTDTGFSAEYLSYDSSDPCPGKFTCNTGRCIDRRMRCDGWLDCVDGSDERSCTCTEQQFRCQNGWCKPKFWVCDNVNDCGDNSDELQCSCSAGSFKCNNGKCIPSSQECDGQDDCGDGTDEGTCSPGKDVPPAVTCKEHTYKCRDGRCISKQNPECDGEQDCEDNSDEENCNCGLRSYVRKSRIVGGQNSDVGEWPWQVSLHVKGQGHICGASLISESWLVSAAHCFLQLQGIRYADPSLWTAYLGLTDQGHLDGPNVQMRKIKRIISHPHFNDYTYDYDIAVMELQTPVTFSSVVQPICLPDVTHTFPVGKDLWVTGWGATVEGGTGAPILQKAEIRLINQTVCNELLTDQLTPRMMCVGILSGGVDACQGDSGGPLVSVEPSTRMFLAGVVSWGDGCAQRNKPGVYSRLTSLRPWLQQQTGL
SIO_010081: ST14
subclass of: SO_0000673
so part of: ST14
location: complement(join(17296..17457,19068..19204,20086..20360,20520..20706,21181..21315,22180..22293,22519..22626,23877..23981,24666..24796,25543..25652,26154..26251,26665..26804,26957..27194,27515..27550,27891..28051,28466..28536,28911..29038,29147..29303))
location: region:17296-29303:-1
so has part: feature:29147-29303:-1:exon
so has part: feature:28911-29038:-1:exon
so has part: feature:28466-28536:-1:exon
so has part: feature:27891-28051:-1:exon
so has part: feature:27515-27550:-1:exon
so has part: feature:26957-27194:-1:exon
so has part: feature:26665-26804:-1:exon
so has part: feature:26154-26251:-1:exon
so has part: feature:25543-25652:-1:exon
so has part: feature:24666-24796:-1:exon
so has part: feature:23877-23981:-1:exon
so has part: feature:22519-22626:-1:exon
so has part: feature:22180-22293:-1:exon
so has part: feature:21181-21315:-1:exon
so has part: feature:20520-20706:-1:exon
so has part: feature:20086-20360:-1:exon
so has part: feature:19068-19204:-1:exon
so has part: feature:17296-17457:-1:exon

XP_030320770.1
type: Protein
SIO_000068: ncbiprotein

position:29303:-1
position: 29303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29147-29303:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:28911-29038:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:28466-28536:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27891-28051:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27515-27550:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:26957-27194:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:26665-26804:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:26154-26251:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:25543-25652:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:24666-24796:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:23877-23981:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:22519-22626:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:22180-22293:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:21181-21315:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:20520-20706:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:20086-20360:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:19068-19204:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:17296-17457:-1:exon

ST14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ST14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of tumorigenicity 14 protein isoform X2
translation: MNHLEEGVEFLPAMNSKKMEKRGPRRRVVISVLILVFLLISLLTGLLVWHFKYRNAPVQKVFNGHLRVLNWDFLDAYENSSSPEFLMLAKKVKSTVEEIYRNHPDIGPYHKETVITAFSEGSVIAYYWSEFLVPKYREESLDRAMADKQSLVQRWNPRLRNPMLKVESVVAFPADPSIANSARDYSCMFALHAKEGEVTSFTTPGFPNSPYPNNALCYWALRADANSIISLTFRTLELEECRDDSDYIKVYNSLSPVEPHALVRLCGNYAPSYNLTFLSSQNVMLVTLVTNKEGRFPGFKAEFFQLPKVTACGGTLKGESGSFTTPFYPAHYPPLMDCVWNIEVPSQKNVKVRFNTFFVLEPGIPITSCTKDYVQINSTRYCGERSQFVVASSTNKIEVKFFSDQSYTDTGFSAEYLSYDSSDPCPGKFTCNTGRCIDRRMRCDGWLDCVDGSDERSCTCTEQQFRCQNGWCKPKFWVCDNVNDCGDNSDELQCSCSAGSFKCNNGKCIPSSQECDGQDDCGDGTDEGTCSPGKDVPPAVTCKEHTYKCRDGRCISKQNPECDGEQDCEDNSDEENCNCGLRSYVRKSRIVGGQNSDVGEWPWQVSLHVKGQGHICGASLISESWLVSAAHCFLQLQGIRYADPSLWTAYLGLTDQGHLDGPNVQMRKIKRIISHPHFNDYTYDYDIAVMELQTPVTFSSVVQPICLPDVTHTFPVGKDLWVTGWGATVEGGTGAPILQKAEIRLINQTVCNELLTDQLTPRMMCVGILSGGVDACQGDSGGPLVSVEPSTRMFLAGVVSWGDGCAQRNKPGVYSRLTSLRPWLQQQTGL
SIO_010081: ST14
subclass of: SO_0000673
so part of: ST14
location: complement(join(17296..17457,19068..19204,20086..20360,20520..20706,21181..21315,22180..22293,22519..22626,23877..23981,24666..24796,25543..25652,26154..26251,26665..26804,26957..27194,27515..27550,27891..28051,28466..28536,28911..29038,29147..29303))
location: region:17296-29303:-1
so has part: feature:29147-29303:-1:exon
so has part: feature:28911-29038:-1:exon
so has part: feature:28466-28536:-1:exon
so has part: feature:27891-28051:-1:exon
so has part: feature:27515-27550:-1:exon
so has part: feature:26957-27194:-1:exon
so has part: feature:26665-26804:-1:exon
so has part: feature:26154-26251:-1:exon
so has part: feature:25543-25652:-1:exon
so has part: feature:24666-24796:-1:exon
so has part: feature:23877-23981:-1:exon
so has part: feature:22519-22626:-1:exon
so has part: feature:22180-22293:-1:exon
so has part: feature:21181-21315:-1:exon
so has part: feature:20520-20706:-1:exon
so has part: feature:20086-20360:-1:exon
so has part: feature:19068-19204:-1:exon
so has part: feature:17296-17457:-1:exon

XP_030320771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29147-29303:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:28911-29038:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:28466-28536:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27891-28051:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27515-27550:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:26957-27194:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:26665-26804:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:26154-26251:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:25543-25652:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:24666-24796:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:23877-23981:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:22519-22626:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:22180-22293:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:21181-21315:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:20520-20706:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:20086-20360:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:19068-19204:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:17296-17457:-1:exon

ST14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ST14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of tumorigenicity 14 protein isoform X2
translation: MNHLEEGVEFLPAMNSKKMEKRGPRRRVVISVLILVFLLISLLTGLLVWHFKYRNAPVQKVFNGHLRVLNWDFLDAYENSSSPEFLMLAKKVKSTVEEIYRNHPDIGPYHKETVITAFSEGSVIAYYWSEFLVPKYREESLDRAMADKQSLVQRWNPRLRNPMLKVESVVAFPADPSIANSARDYSCMFALHAKEGEVTSFTTPGFPNSPYPNNALCYWALRADANSIISLTFRTLELEECRDDSDYIKVYNSLSPVEPHALVRLCGNYAPSYNLTFLSSQNVMLVTLVTNKEGRFPGFKAEFFQLPKVTACGGTLKGESGSFTTPFYPAHYPPLMDCVWNIEVPSQKNVKVRFNTFFVLEPGIPITSCTKDYVQINSTRYCGERSQFVVASSTNKIEVKFFSDQSYTDTGFSAEYLSYDSSDPCPGKFTCNTGRCIDRRMRCDGWLDCVDGSDERSCTCTEQQFRCQNGWCKPKFWVCDNVNDCGDNSDELQCSCSAGSFKCNNGKCIPSSQECDGQDDCGDGTDEGTCSPGKDVPPAVTCKEHTYKCRDGRCISKQNPECDGEQDCEDNSDEENCNCGLRSYVRKSRIVGGQNSDVGEWPWQVSLHVKGQGHICGASLISESWLVSAAHCFLQLQGIRYADPSLWTAYLGLTDQGHLDGPNVQMRKIKRIISHPHFNDYTYDYDIAVMELQTPVTFSSVVQPICLPDVTHTFPVGKDLWVTGWGATVEGGTGAPILQKAEIRLINQTVCNELLTDQLTPRMMCVGILSGGVDACQGDSGGPLVSVEPSTRMFLAGVVSWGDGCAQRNKPGVYSRLTSLRPWLQQQTGL
SIO_010081: ST14
subclass of: SO_0000673
so part of: ST14
location: complement(join(17296..17457,19068..19204,20086..20360,20520..20706,21181..21315,22180..22293,22519..22626,23877..23981,24666..24796,25543..25652,26154..26251,26665..26804,26957..27194,27515..27550,27891..28051,28466..28536,28911..29038,29147..29303))
location: region:17296-29303:-1
so has part: feature:29147-29303:-1:exon
so has part: feature:28911-29038:-1:exon
so has part: feature:28466-28536:-1:exon
so has part: feature:27891-28051:-1:exon
so has part: feature:27515-27550:-1:exon
so has part: feature:26957-27194:-1:exon
so has part: feature:26665-26804:-1:exon
so has part: feature:26154-26251:-1:exon
so has part: feature:25543-25652:-1:exon
so has part: feature:24666-24796:-1:exon
so has part: feature:23877-23981:-1:exon
so has part: feature:22519-22626:-1:exon
so has part: feature:22180-22293:-1:exon
so has part: feature:21181-21315:-1:exon
so has part: feature:20520-20706:-1:exon
so has part: feature:20086-20360:-1:exon
so has part: feature:19068-19204:-1:exon
so has part: feature:17296-17457:-1:exon

XP_030320773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29147-29303:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:28911-29038:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:28466-28536:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27891-28051:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27515-27550:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:26957-27194:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:26665-26804:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:26154-26251:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:25543-25652:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:24666-24796:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:23877-23981:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:22519-22626:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:22180-22293:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:21181-21315:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:20520-20706:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:20086-20360:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:19068-19204:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:17296-17457:-1:exon

NFRKB
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: NFRKB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(45458..62744)
location: region:45458-62744:-1
so has part: feature:45458-62744:-1:exon
subclass of: SO_0000010

103532712
type: Gene
SIO_000068: ncbigene

position:45458:-1
position: 45458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62744:-1
position: 62744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45458-62744:-1:exon

NFRKB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NFRKB
product: nuclear factor related to kappaB binding protein
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 4 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_008498502.2
SIO_010081: NFRKB
subclass of: SO_0000673
so part of: NFRKB
location: complement(join(45458..46704,47414..47549,48308..48415,49188..49977,50311..50529,51284..51563,51668..51888,52503..52582,52985..53108,53535..53641,53761..53935,54873..54933,55294..55337,55430..55509,56014..56079,56898..57024,57520..57628,57795..57975,58436..58520,58856..58929,59494..59595,59801..59975,60778..60905,61003..61204,61781..61918,62593..62744))
location: region:45458-62744:-1
so has part: feature:62593-62744:-1:exon
so has part: feature:61781-61918:-1:exon
so has part: feature:61003-61204:-1:exon
so has part: feature:60778-60905:-1:exon
so has part: feature:59801-59975:-1:exon
so has part: feature:59494-59595:-1:exon
so has part: feature:58856-58929:-1:exon
so has part: feature:58436-58520:-1:exon
so has part: feature:57795-57975:-1:exon
so has part: feature:57520-57628:-1:exon
so has part: feature:56898-57024:-1:exon
so has part: feature:56014-56079:-1:exon
so has part: feature:55430-55509:-1:exon
so has part: feature:55294-55337:-1:exon
so has part: feature:54873-54933:-1:exon
so has part: feature:53761-53935:-1:exon
so has part: feature:53535-53641:-1:exon
so has part: feature:52985-53108:-1:exon
so has part: feature:52503-52582:-1:exon
so has part: feature:51668-51888:-1:exon
so has part: feature:51284-51563:-1:exon
so has part: feature:50311-50529:-1:exon
so has part: feature:49188-49977:-1:exon
so has part: feature:48308-48415:-1:exon
so has part: feature:47414-47549:-1:exon
so has part: feature:45458-46704:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62593-62744:-1:exon

position:62593:-1
position: 62593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:61781-61918:-1:exon

position:61781:-1
position: 61781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61918:-1
position: 61918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:61003-61204:-1:exon

position:61003:-1
position: 61003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61204:-1
position: 61204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:60778-60905:-1:exon

position:60778:-1
position: 60778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60905:-1
position: 60905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:59801-59975:-1:exon

position:59801:-1
position: 59801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59975:-1
position: 59975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:59494-59595:-1:exon

position:59494:-1
position: 59494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59595:-1
position: 59595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:58856-58929:-1:exon

position:58856:-1
position: 58856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58929:-1
position: 58929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:58436-58520:-1:exon

position:58436:-1
position: 58436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58520:-1
position: 58520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:57795-57975:-1:exon

position:57795:-1
position: 57795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57975:-1
position: 57975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:57520-57628:-1:exon

position:57520:-1
position: 57520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57628:-1
position: 57628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:56898-57024:-1:exon

position:56898:-1
position: 56898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57024:-1
position: 57024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:56014-56079:-1:exon

position:56014:-1
position: 56014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56079:-1
position: 56079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:55430-55509:-1:exon

position:55430:-1
position: 55430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55509:-1
position: 55509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:55294-55337:-1:exon

position:55294:-1
position: 55294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55337:-1
position: 55337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:54873-54933:-1:exon

position:54873:-1
position: 54873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54933:-1
position: 54933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:53761-53935:-1:exon

position:53761:-1
position: 53761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53935:-1
position: 53935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:53535-53641:-1:exon

position:53535:-1
position: 53535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53641:-1
position: 53641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:52985-53108:-1:exon

position:52985:-1
position: 52985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53108:-1
position: 53108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:52503-52582:-1:exon

position:52503:-1
position: 52503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52582:-1
position: 52582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:51668-51888:-1:exon

position:51668:-1
position: 51668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51888:-1
position: 51888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:51284-51563:-1:exon

position:51284:-1
position: 51284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51563:-1
position: 51563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:50311-50529:-1:exon

position:50311:-1
position: 50311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50529:-1
position: 50529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:49188-49977:-1:exon

position:49188:-1
position: 49188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49977:-1
position: 49977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:48308-48415:-1:exon

position:48308:-1
position: 48308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48415:-1
position: 48415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:47414-47549:-1:exon

position:47414:-1
position: 47414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47549:-1
position: 47549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:45458-46704:-1:exon

position:46704:-1
position: 46704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NFRKB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NFRKB
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: nuclear factor related to kappa-B-binding protein
translation: MDSLDHMLSDPLELGPCGDGAGTRIMEDCMLGTTRVSLPEDLLEDPEIFFEVVSLSTWQEVLTDAQQDHLKKFLPHFPENNREHQNKLILALFSGENFRFGNPLHIAQKLFRDGHFNPEVVKYRQLCFKSQYKRYLSSQQQYFYRLLKQILASRNHLLELARKGGPDMALRRKHFPPSYDTEERDRRTHRRYLKILREVKEECGDTTLSSDEEDLSSWPPSSPARCSSPPVPLRVIPTLSTLDMKTADKIEFGDSDLKMMLKKHHEKRKRQPDHPDLVTTDLTLEDIMTRVNAGRKGSLAALFDLATLKRKVKEKEDKKKKRLKMVKSEVEDLADSLSNADGIPAMSQDPSPIPLSSVKEEPLEDMKPCLGINEISPVSFFLLLEILFLEGPATLSVLEDKVLDWQTSPASALNNWFSFAPNWSELVLPALQYLTGDSRDAPSSFSPFVEFKEKTQQWKLIGNCQDHEKELAALFQLWLETKDQHFFKENEDSSDATTPIPRVRTDYVVRPSTGEEKRLFQEQERFRYSQPHKAFTFRMHGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAARLPNGEGTRAEICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRNRSEEEFERIHQAQAAAAKAKKALQQKPKPPAKMKSGSKESSVKALPSCTSEPSQLSLSDSSMPPTPVTPVTPTAPALPATPISSPPVSVVSKSGSGAGSEPAKPSQSVLLVSSPTMPQLGTLLSTAQSSQQTQPGPQPPPPRVVSHTTSSGLPQVRVVTAQSSLPAVSQQAPVVTQQQQPPAVPQIRVPATTTQTKVLPQAVMTLPVKAQTSPVQVQRAGSSVTGQTGISVTGLSPAPSPAVKPAASSPGSSATSTSSTTVIQNVAGQNIIKQVAITGQLGMKTQPGSSIPLTATNFRIQGKDVLRLPPSSITTDAKGQTVLRITPDMMATLAKSQVTTVKLTQDLFTAAAGSSTGGKGISATLHVTSNPVQTADSPAKTGTATSASSSSPAGSTVVKVTPDLKTPEPTSSAFRLMPALGMTVADQKSKAITTVASTEAKPAATIRIVQGLGVMPPKAGQTITVATHAKQVPSSSAVSMAGTVHTSAVSLPTVSATVSKAVAVASGAAGTPITIGTGATSVRQVPVSTTVVSTSQAGKLPARITVPLSVISQPVKGKSVVTAPIIKGNLGANISGLGRNIILTTMPAGTKLIAGNKPVSFLTAQQLQQLQQQGQATQVRIQTVPASHLQQGTVSGSTKAVSTVVVTTAPSPKQTQDQL
SIO_010081: NFRKB
subclass of: SO_0000673
so part of: NFRKB
location: complement(join(46579..46704,47414..47549,48308..48415,49188..49977,50311..50529,51284..51563,51668..51888,52503..52582,52985..53108,53535..53641,53761..53935,54873..54933,55294..55337,55430..55509,56014..56079,56898..57024,57520..57628,57795..57975,58436..58520,58856..58929,59494..59595,59801..59975,60778..60905,61003..61204,61781..61915))
location: region:46579-61915:-1
so has part: feature:61781-61915:-1:exon
so has part: feature:61003-61204:-1:exon
so has part: feature:60778-60905:-1:exon
so has part: feature:59801-59975:-1:exon
so has part: feature:59494-59595:-1:exon
so has part: feature:58856-58929:-1:exon
so has part: feature:58436-58520:-1:exon
so has part: feature:57795-57975:-1:exon
so has part: feature:57520-57628:-1:exon
so has part: feature:56898-57024:-1:exon
so has part: feature:56014-56079:-1:exon
so has part: feature:55430-55509:-1:exon
so has part: feature:55294-55337:-1:exon
so has part: feature:54873-54933:-1:exon
so has part: feature:53761-53935:-1:exon
so has part: feature:53535-53641:-1:exon
so has part: feature:52985-53108:-1:exon
so has part: feature:52503-52582:-1:exon
so has part: feature:51668-51888:-1:exon
so has part: feature:51284-51563:-1:exon
so has part: feature:50311-50529:-1:exon
so has part: feature:49188-49977:-1:exon
so has part: feature:48308-48415:-1:exon
so has part: feature:47414-47549:-1:exon
so has part: feature:46579-46704:-1:exon

XP_008496724.2
type: Protein
SIO_000068: ncbiprotein

position:46579:-1
position: 46579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61915:-1
position: 61915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61781-61915:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:61003-61204:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60778-60905:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59801-59975:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:59494-59595:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:58856-58929:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:58436-58520:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:57795-57975:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:57520-57628:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:56898-57024:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:56014-56079:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:55430-55509:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:55294-55337:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:54873-54933:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:53761-53935:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:53535-53641:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:52985-53108:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:52503-52582:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:51668-51888:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:51284-51563:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:50311-50529:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:49188-49977:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:48308-48415:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:47414-47549:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:46579-46704:-1:exon

PRDM10
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PRDM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(63148..106736)
location: region:63148-106736:-1
so has part: feature:63148-106736:-1:exon
subclass of: SO_0000010

103532711
type: Gene
SIO_000068: ncbigene

position:63148:-1
position: 63148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106736:-1
position: 106736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63148-106736:-1:exon

PRDM10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PRDM10
product: PR/SET domain 10, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 1 long SRA read, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464752.1
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
location: complement(join(63148..66163,66652..66764,67281..67455,68027..68167,69330..69500,70531..70674,71221..71421,72497..72607,73379..73558,75216..75371,76598..76945,81757..81990,83949..84078,84963..85080,85731..85803,87753..87956,88745..88986,89354..89561,90554..90673,93233..93292,94846..95010,97516..97663,106615..106736))
location: region:63148-106736:-1
so has part: feature:106615-106736:-1:exon
so has part: feature:97516-97663:-1:exon
so has part: feature:94846-95010:-1:exon
so has part: feature:93233-93292:-1:exon
so has part: feature:90554-90673:-1:exon
so has part: feature:89354-89561:-1:exon
so has part: feature:88745-88986:-1:exon
so has part: feature:87753-87956:-1:exon
so has part: feature:85731-85803:-1:exon
so has part: feature:84963-85080:-1:exon
so has part: feature:83949-84078:-1:exon
so has part: feature:81757-81990:-1:exon
so has part: feature:76598-76945:-1:exon
so has part: feature:75216-75371:-1:exon
so has part: feature:73379-73558:-1:exon
so has part: feature:72497-72607:-1:exon
so has part: feature:71221-71421:-1:exon
so has part: feature:70531-70674:-1:exon
so has part: feature:69330-69500:-1:exon
so has part: feature:68027-68167:-1:exon
so has part: feature:67281-67455:-1:exon
so has part: feature:66652-66764:-1:exon
so has part: feature:63148-66163:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:106615-106736:-1:exon

position:106615:-1
position: 106615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:97516-97663:-1:exon

position:97516:-1
position: 97516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97663:-1
position: 97663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:94846-95010:-1:exon

position:94846:-1
position: 94846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95010:-1
position: 95010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:93233-93292:-1:exon

position:93233:-1
position: 93233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93292:-1
position: 93292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:90554-90673:-1:exon

position:90554:-1
position: 90554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90673:-1
position: 90673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:89354-89561:-1:exon

position:89354:-1
position: 89354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89561:-1
position: 89561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:88745-88986:-1:exon

position:88745:-1
position: 88745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88986:-1
position: 88986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:87753-87956:-1:exon

position:87753:-1
position: 87753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87956:-1
position: 87956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:85731-85803:-1:exon

position:85731:-1
position: 85731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85803:-1
position: 85803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:84963-85080:-1:exon

position:84963:-1
position: 84963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85080:-1
position: 85080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:83949-84078:-1:exon

position:83949:-1
position: 83949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84078:-1
position: 84078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:81757-81990:-1:exon

position:81757:-1
position: 81757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81990:-1
position: 81990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:76598-76945:-1:exon

position:76598:-1
position: 76598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76945:-1
position: 76945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:75216-75371:-1:exon

position:75216:-1
position: 75216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75371:-1
position: 75371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
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PRDM10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PRDM10
product: PR/SET domain 10, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464753.1
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
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location: region:63148-106736:-1
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PRDM10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PRDM10
product: PR/SET domain 10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464748.1
SIO_010081: PRDM10
subclass of: SO_0000673
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location: region:63148-106736:-1
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PRDM10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PRDM10
product: PR/SET domain 10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464749.1
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
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location: region:63148-106631:-1
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PRDM10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PRDM10
product: PR/SET domain 10, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464751.1
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
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location: region:63148-106311:-1
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PRDM10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PRDM10
product: PR/SET domain 10, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464750.1
SIO_010081: PRDM10
subclass of: SO_0000673
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location: region:63148-106311:-1
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urn:…
SIO_000300: 3
SIO_000628: feature:97474-97663:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94846-95010:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:93233-93292:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:90554-90673:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:89354-89561:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:88745-88986:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:87753-87956:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:85731-85803:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:84963-85080:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:83949-84078:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:81757-81990:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:76598-76945:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:75216-75371:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:73379-73558:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:72497-72607:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:71221-71421:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:70531-70674:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:69330-69500:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:68027-68167:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:67281-67455:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:66652-66764:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:63148-66163:-1:exon

PRDM10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PRDM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 10 isoform X2
translation: MEHHGREEMDSKEESPQVHFVPEGGTVAQIVYSEEQDRPSQQVVYTADGTSYTSVDTSEHTLVYIHPVEATQTLFTDPSQVAYVQQDATTQQVTVLLPAAAQSMNPTNLSVLGNVAESPQQMALEQGPQADRASLPLHNQVLPPMEAVDGSDPLAPLQNQMGRMEPKEEDDEDEDEDEEGEDTDMDEWDPDPPRPFDPNDLWCEECNNAHPSVCPKHGPLHPIPNRPVLTRARASLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVRQAELKDCYIHLKVSLDKGDRKDRDLQEDLWFELSSEALCNWMMFVRPAQNHLEQNLVAYQYGHHIYYTTIKNVEPKQELKVWYAASYAEFVNQKIHDISEEERKVLREQEKNWPCYECNRRFMSSEQLQQHLNSHDEKLDFFSRARGRGRGRGKRRFGPGRRPGRPPKFIRLEVTSENGEKCEEGTQDLLHFSSKGQFDEAAGQATLNGLEQQEQTPVPSETQSALEQPFENHPLQIQPQQQEESTVPPQSTMTADDMRRAKRIRNAALQHLFIRKSFRPFKCLQCGKAFREKDKLDQHLRFHGREGNCPLTCDICNKGFINSGALESHMKFHMDQKTYSCIFCPESFDRLDLLKDHVAIHVSDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHMLRHSDRKDFLCSTCGKQFKRKDKLREHMQRMHNPEREAKKADRISRSKTFKPRIASTDYESFMFKCRLCMMGFRRRGMLVNHLSKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKSASKRKAHILKNHPGAELPPSIRKLRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQYSSKTKMVQHIRKKHPEFAQLPNTIHAPLATAVISSTPAVLTTDSTTGETVVTTDLLTQAMTEISQTLTTDYRTPQGDYQRIQYIPVSQSTTGLQQPQHIQLQVVQVAQATSPHQSQHSTVDVGQLHDPQTYAQHAIQVQHIQVTEPAPATQSSSQVGGQPLSPSSQQSQQELSPSQMQTTTSTPNQGLQQQQQQGSAVQHTYLPSTWNSFRSYSSEIQMMTIPQGQYVITETAVGTPVTTVNTGQVKAVTQTHYVISEGQPELDVKQNSSLSSEVRVGVSQPPSHTDPLESQTSSQQQQTTQYIITTTTNGNGGSEVHITKPRTFSAEHE
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
location: complement(join(65924..66163,66652..66764,67281..67455,68027..68167,69330..69500,70531..70674,71221..71421,72497..72607,73379..73558,75216..75371,76598..76945,81757..81990,83949..84078,84963..85080,85731..85803,87753..87956,88745..88986,89354..89561,90554..90673,93233..93292,94846..95010,97516..97566))
location: region:65924-97566:-1
so has part: feature:97516-97566:-1:exon
so has part: feature:94846-95010:-1:exon
so has part: feature:93233-93292:-1:exon
so has part: feature:90554-90673:-1:exon
so has part: feature:89354-89561:-1:exon
so has part: feature:88745-88986:-1:exon
so has part: feature:87753-87956:-1:exon
so has part: feature:85731-85803:-1:exon
so has part: feature:84963-85080:-1:exon
so has part: feature:83949-84078:-1:exon
so has part: feature:81757-81990:-1:exon
so has part: feature:76598-76945:-1:exon
so has part: feature:75216-75371:-1:exon
so has part: feature:73379-73558:-1:exon
so has part: feature:72497-72607:-1:exon
so has part: feature:71221-71421:-1:exon
so has part: feature:70531-70674:-1:exon
so has part: feature:69330-69500:-1:exon
so has part: feature:68027-68167:-1:exon
so has part: feature:67281-67455:-1:exon
so has part: feature:66652-66764:-1:exon
so has part: feature:65924-66163:-1:exon

XP_030320612.1
type: Protein
SIO_000068: ncbiprotein

position:65924:-1
position: 65924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97566:-1
position: 97566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97516-97566:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94846-95010:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93233-93292:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:90554-90673:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89354-89561:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:88745-88986:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:87753-87956:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85731-85803:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:84963-85080:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:83949-84078:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:81757-81990:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:76598-76945:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:75216-75371:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:73379-73558:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:72497-72607:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:71221-71421:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:70531-70674:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:69330-69500:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:68027-68167:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:67281-67455:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:66652-66764:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:65924-66163:-1:exon

PRDM10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PRDM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 10 isoform X3
translation: MEHHGREEMDSKEESPQVWPDSAEQEPSTAQVHFVPEGGTVAQIVYSEEQDRPSQQVVYTADGTSYTSVDTSEHTLVYIHPVEATQTLFTDPSQVAYVQQDATTQQASLPLHNQVLPPMEAVDGSDPLAPLQNQMGRMEPKEEDDEDEDEDEEGEDTDMDEWDPDPPRPFDPNDLWCEECNNAHPSVCPKHGPLHPIPNRPVLTRARASLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVRQAELKDCYIHLKVSLDKGDRKDRDLQEDLWFELSSEALCNWMMFVRPAQNHLEQNLVAYQYGHHIYYTTIKNVEPKQELKVWYAASYAEFVNQKIHDISEEERKVLREQEKNWPCYECNRRFMSSEQLQQHLNSHDEKLDFFSRARGRGRGRGKRRFGPGRRPGRPPKFIRLEVTSENGEKCEEGTQDLLHFSSKGQFDEAAGQATLNGLEQQEQTPVPSETQSALEQPFENHPLQIQPQQQEESTVPPQSTMTADDMRRAKRIRNAALQHLFIRKSFRPFKCLQCGKAFREKDKLDQHLRFHGREGNCPLTCDICNKGFINSGALESHMKFHMDQKTYSCIFCPESFDRLDLLKDHVAIHVSDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHMLRHSDRKDFLCSTCGKQFKRKDKLREHMQRMHNPEREAKKADRISRSKTFKPRIASTDYESFMFKCRLCMMGFRRRGMLVNHLSKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKSASKRKAHILKNHPGAELPPSIRKLRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQYSSKTKMVQHIRKKHPEFAQLPNTIHAPLATAVISSTPAVLTTDSTTGETVVTTDLLTQAMTEISQTLTTDYRTPQGDYQRIQYIPVSQSTTGLQQPQHIQLQVVQVAQATSPHQSQHSTVDVGQLHDPQTYAQHAIQVQHIQVTEPAPATQSSSQVGGQPLSPSSQQSQQELSPSQMQTTTSTPNQGLQQQQQQGSAVQHTYLPSTWNSFRSYSSEIQMMTIPQGQYVITETAVGTPVTTVNTGQVKAVTQTHYVISEGQPELDVKQNSSLSSEVRVGVSQPPSHTDPLESQTSSQQQQTTQYIITTTTNGNGGSEVHITKPRTFSAEHE
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
location: complement(join(65924..66163,66652..66764,67281..67455,68027..68167,69330..69500,70531..70674,71221..71421,72497..72607,73379..73558,75216..75371,76598..76945,81757..81990,83949..84078,84963..85080,85731..85803,87753..87956,88745..88986,89354..89561,93233..93292,94846..95010,97474..97566))
location: region:65924-97566:-1
so has part: feature:97474-97566:-1:exon
so has part: feature:94846-95010:-1:exon
so has part: feature:93233-93292:-1:exon
so has part: feature:89354-89561:-1:exon
so has part: feature:88745-88986:-1:exon
so has part: feature:87753-87956:-1:exon
so has part: feature:85731-85803:-1:exon
so has part: feature:84963-85080:-1:exon
so has part: feature:83949-84078:-1:exon
so has part: feature:81757-81990:-1:exon
so has part: feature:76598-76945:-1:exon
so has part: feature:75216-75371:-1:exon
so has part: feature:73379-73558:-1:exon
so has part: feature:72497-72607:-1:exon
so has part: feature:71221-71421:-1:exon
so has part: feature:70531-70674:-1:exon
so has part: feature:69330-69500:-1:exon
so has part: feature:68027-68167:-1:exon
so has part: feature:67281-67455:-1:exon
so has part: feature:66652-66764:-1:exon
so has part: feature:65924-66163:-1:exon

XP_030320613.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97474-97566:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94846-95010:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93233-93292:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89354-89561:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:88745-88986:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:87753-87956:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:85731-85803:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:84963-85080:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:83949-84078:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:81757-81990:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:76598-76945:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:75216-75371:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:73379-73558:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:72497-72607:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:71221-71421:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:70531-70674:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:69330-69500:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:68027-68167:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:67281-67455:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:66652-66764:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:65924-66163:-1:exon

PRDM10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PRDM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 10 isoform X1
translation: MEHHGREEMDSKEESPQVWPDSAEQEPSTAQVHFVPEGGTVAQIVYSEEQDRPSQQVVYTADGTSYTSVDTSEHTLVYIHPVEATQTLFTDPSQVAYVQQDATTQQVTVLLPAAAQSMNPTNLSVLGNVAESPQQMALEQGPQADRASLPLHNQVLPPMEAVDGSDPLAPLQNQMGRMEPKEEDDEDEDEDEEGEDTDMDEWDPDPPRPFDPNDLWCEECNNAHPSVCPKHGPLHPIPNRPVLTRARASLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVRQAELKDCYIHLKVSLDKGDRKDRDLQEDLWFELSSEALCNWMMFVRPAQNHLEQNLVAYQYGHHIYYTTIKNVEPKQELKVWYAASYAEFVNQKIHDISEEERKVLREQEKNWPCYECNRRFMSSEQLQQHLNSHDEKLDFFSRARGRGRGRGKRRFGPGRRPGRPPKFIRLEVTSENGEKCEEGTQDLLHFSSKGQFDEAAGQATLNGLEQQEQTPVPSETQSALEQPFENHPLQIQPQQQEESTVPPQSTMTADDMRRAKRIRNAALQHLFIRKSFRPFKCLQCGKAFREKDKLDQHLRFHGREGNCPLTCDICNKGFINSGALESHMKFHMDQKTYSCIFCPESFDRLDLLKDHVAIHVSDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHMLRHSDRKDFLCSTCGKQFKRKDKLREHMQRMHNPEREAKKADRISRSKTFKPRIASTDYESFMFKCRLCMMGFRRRGMLVNHLSKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKSASKRKAHILKNHPGAELPPSIRKLRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQYSSKTKMVQHIRKKHPEFAQLPNTIHAPLATAVISSTPAVLTTDSTTGETVVTTDLLTQAMTEISQTLTTDYRTPQGDYQRIQYIPVSQSTTGLQQPQHIQLQVVQVAQATSPHQSQHSTVDVGQLHDPQTYAQHAIQVQHIQVTEPAPATQSSSQVGGQPLSPSSQQSQQELSPSQMQTTTSTPNQGLQQQQQQGSAVQHTYLPSTWNSFRSYSSEIQMMTIPQGQYVITETAVGTPVTTVNTGQVKAVTQTHYVISEGQPELDVKQNSSLSSEVRVGVSQPPSHTDPLESQTSSQQQQTTQYIITTTTNGNGGSEVHITKPRTFSAEHE
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
location: complement(join(65924..66163,66652..66764,67281..67455,68027..68167,69330..69500,70531..70674,71221..71421,72497..72607,73379..73558,75216..75371,76598..76945,81757..81990,83949..84078,84963..85080,85731..85803,87753..87956,88745..88986,89354..89561,90554..90673,93233..93292,94846..95010,97474..97566))
location: region:65924-97566:-1
so has part: feature:97474-97566:-1:exon
so has part: feature:94846-95010:-1:exon
so has part: feature:93233-93292:-1:exon
so has part: feature:90554-90673:-1:exon
so has part: feature:89354-89561:-1:exon
so has part: feature:88745-88986:-1:exon
so has part: feature:87753-87956:-1:exon
so has part: feature:85731-85803:-1:exon
so has part: feature:84963-85080:-1:exon
so has part: feature:83949-84078:-1:exon
so has part: feature:81757-81990:-1:exon
so has part: feature:76598-76945:-1:exon
so has part: feature:75216-75371:-1:exon
so has part: feature:73379-73558:-1:exon
so has part: feature:72497-72607:-1:exon
so has part: feature:71221-71421:-1:exon
so has part: feature:70531-70674:-1:exon
so has part: feature:69330-69500:-1:exon
so has part: feature:68027-68167:-1:exon
so has part: feature:67281-67455:-1:exon
so has part: feature:66652-66764:-1:exon
so has part: feature:65924-66163:-1:exon

XP_030320608.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97474-97566:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94846-95010:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93233-93292:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:90554-90673:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89354-89561:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:88745-88986:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:87753-87956:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85731-85803:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:84963-85080:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:83949-84078:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:81757-81990:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:76598-76945:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:75216-75371:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:73379-73558:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:72497-72607:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:71221-71421:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:70531-70674:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:69330-69500:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:68027-68167:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:67281-67455:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:66652-66764:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:65924-66163:-1:exon

PRDM10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PRDM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 10 isoform X1
translation: MEHHGREEMDSKEESPQVWPDSAEQEPSTAQVHFVPEGGTVAQIVYSEEQDRPSQQVVYTADGTSYTSVDTSEHTLVYIHPVEATQTLFTDPSQVAYVQQDATTQQVTVLLPAAAQSMNPTNLSVLGNVAESPQQMALEQGPQADRASLPLHNQVLPPMEAVDGSDPLAPLQNQMGRMEPKEEDDEDEDEDEEGEDTDMDEWDPDPPRPFDPNDLWCEECNNAHPSVCPKHGPLHPIPNRPVLTRARASLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVRQAELKDCYIHLKVSLDKGDRKDRDLQEDLWFELSSEALCNWMMFVRPAQNHLEQNLVAYQYGHHIYYTTIKNVEPKQELKVWYAASYAEFVNQKIHDISEEERKVLREQEKNWPCYECNRRFMSSEQLQQHLNSHDEKLDFFSRARGRGRGRGKRRFGPGRRPGRPPKFIRLEVTSENGEKCEEGTQDLLHFSSKGQFDEAAGQATLNGLEQQEQTPVPSETQSALEQPFENHPLQIQPQQQEESTVPPQSTMTADDMRRAKRIRNAALQHLFIRKSFRPFKCLQCGKAFREKDKLDQHLRFHGREGNCPLTCDICNKGFINSGALESHMKFHMDQKTYSCIFCPESFDRLDLLKDHVAIHVSDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHMLRHSDRKDFLCSTCGKQFKRKDKLREHMQRMHNPEREAKKADRISRSKTFKPRIASTDYESFMFKCRLCMMGFRRRGMLVNHLSKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKSASKRKAHILKNHPGAELPPSIRKLRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQYSSKTKMVQHIRKKHPEFAQLPNTIHAPLATAVISSTPAVLTTDSTTGETVVTTDLLTQAMTEISQTLTTDYRTPQGDYQRIQYIPVSQSTTGLQQPQHIQLQVVQVAQATSPHQSQHSTVDVGQLHDPQTYAQHAIQVQHIQVTEPAPATQSSSQVGGQPLSPSSQQSQQELSPSQMQTTTSTPNQGLQQQQQQGSAVQHTYLPSTWNSFRSYSSEIQMMTIPQGQYVITETAVGTPVTTVNTGQVKAVTQTHYVISEGQPELDVKQNSSLSSEVRVGVSQPPSHTDPLESQTSSQQQQTTQYIITTTTNGNGGSEVHITKPRTFSAEHE
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
location: complement(join(65924..66163,66652..66764,67281..67455,68027..68167,69330..69500,70531..70674,71221..71421,72497..72607,73379..73558,75216..75371,76598..76945,81757..81990,83949..84078,84963..85080,85731..85803,87753..87956,88745..88986,89354..89561,90554..90673,93233..93292,94846..95010,97474..97566))
location: region:65924-97566:-1
so has part: feature:97474-97566:-1:exon
so has part: feature:94846-95010:-1:exon
so has part: feature:93233-93292:-1:exon
so has part: feature:90554-90673:-1:exon
so has part: feature:89354-89561:-1:exon
so has part: feature:88745-88986:-1:exon
so has part: feature:87753-87956:-1:exon
so has part: feature:85731-85803:-1:exon
so has part: feature:84963-85080:-1:exon
so has part: feature:83949-84078:-1:exon
so has part: feature:81757-81990:-1:exon
so has part: feature:76598-76945:-1:exon
so has part: feature:75216-75371:-1:exon
so has part: feature:73379-73558:-1:exon
so has part: feature:72497-72607:-1:exon
so has part: feature:71221-71421:-1:exon
so has part: feature:70531-70674:-1:exon
so has part: feature:69330-69500:-1:exon
so has part: feature:68027-68167:-1:exon
so has part: feature:67281-67455:-1:exon
so has part: feature:66652-66764:-1:exon
so has part: feature:65924-66163:-1:exon

XP_030320609.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97474-97566:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94846-95010:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93233-93292:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:90554-90673:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89354-89561:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:88745-88986:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:87753-87956:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85731-85803:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:84963-85080:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:83949-84078:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:81757-81990:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:76598-76945:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:75216-75371:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:73379-73558:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:72497-72607:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:71221-71421:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:70531-70674:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:69330-69500:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:68027-68167:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:67281-67455:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:66652-66764:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:65924-66163:-1:exon

PRDM10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PRDM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 10 isoform X1
translation: MEHHGREEMDSKEESPQVWPDSAEQEPSTAQVHFVPEGGTVAQIVYSEEQDRPSQQVVYTADGTSYTSVDTSEHTLVYIHPVEATQTLFTDPSQVAYVQQDATTQQVTVLLPAAAQSMNPTNLSVLGNVAESPQQMALEQGPQADRASLPLHNQVLPPMEAVDGSDPLAPLQNQMGRMEPKEEDDEDEDEDEEGEDTDMDEWDPDPPRPFDPNDLWCEECNNAHPSVCPKHGPLHPIPNRPVLTRARASLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVRQAELKDCYIHLKVSLDKGDRKDRDLQEDLWFELSSEALCNWMMFVRPAQNHLEQNLVAYQYGHHIYYTTIKNVEPKQELKVWYAASYAEFVNQKIHDISEEERKVLREQEKNWPCYECNRRFMSSEQLQQHLNSHDEKLDFFSRARGRGRGRGKRRFGPGRRPGRPPKFIRLEVTSENGEKCEEGTQDLLHFSSKGQFDEAAGQATLNGLEQQEQTPVPSETQSALEQPFENHPLQIQPQQQEESTVPPQSTMTADDMRRAKRIRNAALQHLFIRKSFRPFKCLQCGKAFREKDKLDQHLRFHGREGNCPLTCDICNKGFINSGALESHMKFHMDQKTYSCIFCPESFDRLDLLKDHVAIHVSDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHMLRHSDRKDFLCSTCGKQFKRKDKLREHMQRMHNPEREAKKADRISRSKTFKPRIASTDYESFMFKCRLCMMGFRRRGMLVNHLSKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKSASKRKAHILKNHPGAELPPSIRKLRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQYSSKTKMVQHIRKKHPEFAQLPNTIHAPLATAVISSTPAVLTTDSTTGETVVTTDLLTQAMTEISQTLTTDYRTPQGDYQRIQYIPVSQSTTGLQQPQHIQLQVVQVAQATSPHQSQHSTVDVGQLHDPQTYAQHAIQVQHIQVTEPAPATQSSSQVGGQPLSPSSQQSQQELSPSQMQTTTSTPNQGLQQQQQQGSAVQHTYLPSTWNSFRSYSSEIQMMTIPQGQYVITETAVGTPVTTVNTGQVKAVTQTHYVISEGQPELDVKQNSSLSSEVRVGVSQPPSHTDPLESQTSSQQQQTTQYIITTTTNGNGGSEVHITKPRTFSAEHE
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
location: complement(join(65924..66163,66652..66764,67281..67455,68027..68167,69330..69500,70531..70674,71221..71421,72497..72607,73379..73558,75216..75371,76598..76945,81757..81990,83949..84078,84963..85080,85731..85803,87753..87956,88745..88986,89354..89561,90554..90673,93233..93292,94846..95010,97474..97566))
location: region:65924-97566:-1
so has part: feature:97474-97566:-1:exon
so has part: feature:94846-95010:-1:exon
so has part: feature:93233-93292:-1:exon
so has part: feature:90554-90673:-1:exon
so has part: feature:89354-89561:-1:exon
so has part: feature:88745-88986:-1:exon
so has part: feature:87753-87956:-1:exon
so has part: feature:85731-85803:-1:exon
so has part: feature:84963-85080:-1:exon
so has part: feature:83949-84078:-1:exon
so has part: feature:81757-81990:-1:exon
so has part: feature:76598-76945:-1:exon
so has part: feature:75216-75371:-1:exon
so has part: feature:73379-73558:-1:exon
so has part: feature:72497-72607:-1:exon
so has part: feature:71221-71421:-1:exon
so has part: feature:70531-70674:-1:exon
so has part: feature:69330-69500:-1:exon
so has part: feature:68027-68167:-1:exon
so has part: feature:67281-67455:-1:exon
so has part: feature:66652-66764:-1:exon
so has part: feature:65924-66163:-1:exon

XP_030320610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97474-97566:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94846-95010:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93233-93292:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:90554-90673:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89354-89561:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:88745-88986:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:87753-87956:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85731-85803:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:84963-85080:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:83949-84078:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:81757-81990:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:76598-76945:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:75216-75371:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:73379-73558:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:72497-72607:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:71221-71421:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:70531-70674:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:69330-69500:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:68027-68167:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:67281-67455:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:66652-66764:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:65924-66163:-1:exon

PRDM10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PRDM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 10 isoform X1
translation: MEHHGREEMDSKEESPQVWPDSAEQEPSTAQVHFVPEGGTVAQIVYSEEQDRPSQQVVYTADGTSYTSVDTSEHTLVYIHPVEATQTLFTDPSQVAYVQQDATTQQVTVLLPAAAQSMNPTNLSVLGNVAESPQQMALEQGPQADRASLPLHNQVLPPMEAVDGSDPLAPLQNQMGRMEPKEEDDEDEDEDEEGEDTDMDEWDPDPPRPFDPNDLWCEECNNAHPSVCPKHGPLHPIPNRPVLTRARASLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVRQAELKDCYIHLKVSLDKGDRKDRDLQEDLWFELSSEALCNWMMFVRPAQNHLEQNLVAYQYGHHIYYTTIKNVEPKQELKVWYAASYAEFVNQKIHDISEEERKVLREQEKNWPCYECNRRFMSSEQLQQHLNSHDEKLDFFSRARGRGRGRGKRRFGPGRRPGRPPKFIRLEVTSENGEKCEEGTQDLLHFSSKGQFDEAAGQATLNGLEQQEQTPVPSETQSALEQPFENHPLQIQPQQQEESTVPPQSTMTADDMRRAKRIRNAALQHLFIRKSFRPFKCLQCGKAFREKDKLDQHLRFHGREGNCPLTCDICNKGFINSGALESHMKFHMDQKTYSCIFCPESFDRLDLLKDHVAIHVSDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHMLRHSDRKDFLCSTCGKQFKRKDKLREHMQRMHNPEREAKKADRISRSKTFKPRIASTDYESFMFKCRLCMMGFRRRGMLVNHLSKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKSASKRKAHILKNHPGAELPPSIRKLRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQYSSKTKMVQHIRKKHPEFAQLPNTIHAPLATAVISSTPAVLTTDSTTGETVVTTDLLTQAMTEISQTLTTDYRTPQGDYQRIQYIPVSQSTTGLQQPQHIQLQVVQVAQATSPHQSQHSTVDVGQLHDPQTYAQHAIQVQHIQVTEPAPATQSSSQVGGQPLSPSSQQSQQELSPSQMQTTTSTPNQGLQQQQQQGSAVQHTYLPSTWNSFRSYSSEIQMMTIPQGQYVITETAVGTPVTTVNTGQVKAVTQTHYVISEGQPELDVKQNSSLSSEVRVGVSQPPSHTDPLESQTSSQQQQTTQYIITTTTNGNGGSEVHITKPRTFSAEHE
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
location: complement(join(65924..66163,66652..66764,67281..67455,68027..68167,69330..69500,70531..70674,71221..71421,72497..72607,73379..73558,75216..75371,76598..76945,81757..81990,83949..84078,84963..85080,85731..85803,87753..87956,88745..88986,89354..89561,90554..90673,93233..93292,94846..95010,97474..97566))
location: region:65924-97566:-1
so has part: feature:97474-97566:-1:exon
so has part: feature:94846-95010:-1:exon
so has part: feature:93233-93292:-1:exon
so has part: feature:90554-90673:-1:exon
so has part: feature:89354-89561:-1:exon
so has part: feature:88745-88986:-1:exon
so has part: feature:87753-87956:-1:exon
so has part: feature:85731-85803:-1:exon
so has part: feature:84963-85080:-1:exon
so has part: feature:83949-84078:-1:exon
so has part: feature:81757-81990:-1:exon
so has part: feature:76598-76945:-1:exon
so has part: feature:75216-75371:-1:exon
so has part: feature:73379-73558:-1:exon
so has part: feature:72497-72607:-1:exon
so has part: feature:71221-71421:-1:exon
so has part: feature:70531-70674:-1:exon
so has part: feature:69330-69500:-1:exon
so has part: feature:68027-68167:-1:exon
so has part: feature:67281-67455:-1:exon
so has part: feature:66652-66764:-1:exon
so has part: feature:65924-66163:-1:exon

XP_030320611.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97474-97566:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94846-95010:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93233-93292:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:90554-90673:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89354-89561:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:88745-88986:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:87753-87956:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85731-85803:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:84963-85080:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:83949-84078:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:81757-81990:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:76598-76945:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:75216-75371:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:73379-73558:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:72497-72607:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:71221-71421:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:70531-70674:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:69330-69500:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:68027-68167:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:67281-67455:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:66652-66764:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:65924-66163:-1:exon

PRDM10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PRDM10
product: PR/SET domain 10, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464754.1
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
location: complement(join(66171..66226,66652..66764,67281..67455,68027..68167,69330..69500,70531..70674,71221..71421,72497..72607,73379..73558,75216..75371,76598..76945,81757..81990,83949..84078,84963..85080,85731..85803,87753..87956,88745..88986,89354..89561,90554..90673,93233..93292,94846..95010,97474..97663,106615..106736))
location: region:66171-106736:-1
so has part: feature:106615-106736:-1:exon
so has part: feature:97474-97663:-1:exon
so has part: feature:94846-95010:-1:exon
so has part: feature:93233-93292:-1:exon
so has part: feature:90554-90673:-1:exon
so has part: feature:89354-89561:-1:exon
so has part: feature:88745-88986:-1:exon
so has part: feature:87753-87956:-1:exon
so has part: feature:85731-85803:-1:exon
so has part: feature:84963-85080:-1:exon
so has part: feature:83949-84078:-1:exon
so has part: feature:81757-81990:-1:exon
so has part: feature:76598-76945:-1:exon
so has part: feature:75216-75371:-1:exon
so has part: feature:73379-73558:-1:exon
so has part: feature:72497-72607:-1:exon
so has part: feature:71221-71421:-1:exon
so has part: feature:70531-70674:-1:exon
so has part: feature:69330-69500:-1:exon
so has part: feature:68027-68167:-1:exon
so has part: feature:67281-67455:-1:exon
so has part: feature:66652-66764:-1:exon
so has part: feature:66171-66226:-1:exon

position:66171:-1
position: 66171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106615-106736:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:97474-97663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:94846-95010:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:93233-93292:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:90554-90673:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:89354-89561:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:88745-88986:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:87753-87956:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:85731-85803:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:84963-85080:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:83949-84078:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:81757-81990:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:76598-76945:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:75216-75371:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:73379-73558:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:72497-72607:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:71221-71421:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:70531-70674:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:69330-69500:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:68027-68167:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:67281-67455:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:66652-66764:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:66171-66226:-1:exon

position:66226:-1
position: 66226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PRDM10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PRDM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 10 isoform X4
translation: MEHHGREEMDSKEESPQVWPDSAEQEPSTAQVHFVPEGGTVAQIVYSEEQDRPSQQVVYTADGTSYTSVDTSEHTLVYIHPVEATQTLFTDPSQVAYVQQDATTQQVTVLLPAAAQSMNPTNLSVLGNVAESPQQMALEQGPQADRASLPLHNQVLPPMEAVDGSDPLAPLQNQMGRMEPKEEDDEDEDEDEEGEDTDMDEWDPDPPRPFDPNDLWCEECNNAHPSVCPKHGPLHPIPNRPVLTRARASLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVRQAELKDCYIHLKVSLDKGDRKDRDLQEDLWFELSSEALCNWMMFVRPAQNHLEQNLVAYQYGHHIYYTTIKNVEPKQELKVWYAASYAEFVNQKIHDISEEERKVLREQEKNWPCYECNRRFMSSEQLQQHLNSHDEKLDFFSRARGRGRGRGKRRFGPGRRPGRPPKFIRLEVTSENGEKCEEGTQDLLHFSSKGQFDEAAGQATLNGLEQQEQTPVPSETQSALEQPFENHPLQIQPQQQEESTVPPQSTMTADDMRRAKRIRNAALQHLFIRKSFRPFKCLQCGKAFREKDKLDQHLRFHGREGNCPLTCDICNKGFINSGALESHMKFHMDQKTYSCIFCPESFDRLDLLKDHVAIHVSDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHMLRHSDRKDFLCSTCGKQFKRKDKLREHMQRMHNPEREAKKADRISRSKTFKPRIASTDYESFMFKCRLCMMGFRRRGMLVNHLSKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKSASKRKAHILKNHPGAELPPSIRKLRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQYSSKTKMVQHIRKKHPEFAQLPNTIHAPLATAVISSTPAVLTTDSTTGETVVTTDLLTQAMTEISQTLTTDYRTPQGDYQRIQYIPVSQSTTGLQQPQHIQLQVVQVAQATSPHQSQHSTVDVGQLHDPQTYAQHAIQVQHIQVTEPAPATQSSSQVGGQPLSPSSQQSQQELSPSQMQTTTSTPNQGLQQQQQQGSAVQHTYLPSTWNSFRSYSSEIQMMTIPQGQYVITETAVGTPVTTVNTGQVKAVTQQQEG
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
location: complement(join(66212..66226,66652..66764,67281..67455,68027..68167,69330..69500,70531..70674,71221..71421,72497..72607,73379..73558,75216..75371,76598..76945,81757..81990,83949..84078,84963..85080,85731..85803,87753..87956,88745..88986,89354..89561,90554..90673,93233..93292,94846..95010,97474..97566))
location: region:66212-97566:-1
so has part: feature:97474-97566:-1:exon
so has part: feature:94846-95010:-1:exon
so has part: feature:93233-93292:-1:exon
so has part: feature:90554-90673:-1:exon
so has part: feature:89354-89561:-1:exon
so has part: feature:88745-88986:-1:exon
so has part: feature:87753-87956:-1:exon
so has part: feature:85731-85803:-1:exon
so has part: feature:84963-85080:-1:exon
so has part: feature:83949-84078:-1:exon
so has part: feature:81757-81990:-1:exon
so has part: feature:76598-76945:-1:exon
so has part: feature:75216-75371:-1:exon
so has part: feature:73379-73558:-1:exon
so has part: feature:72497-72607:-1:exon
so has part: feature:71221-71421:-1:exon
so has part: feature:70531-70674:-1:exon
so has part: feature:69330-69500:-1:exon
so has part: feature:68027-68167:-1:exon
so has part: feature:67281-67455:-1:exon
so has part: feature:66652-66764:-1:exon
so has part: feature:66212-66226:-1:exon

XP_030320614.1
type: Protein
SIO_000068: ncbiprotein

position:66212:-1
position: 66212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97474-97566:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94846-95010:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93233-93292:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:90554-90673:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89354-89561:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:88745-88986:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:87753-87956:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85731-85803:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:84963-85080:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:83949-84078:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:81757-81990:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:76598-76945:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:75216-75371:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:73379-73558:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:72497-72607:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:71221-71421:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:70531-70674:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:69330-69500:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:68027-68167:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:67281-67455:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:66652-66764:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:66212-66226:-1:exon

PRDM10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PRDM10
product: PR/SET domain 10, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464755.1
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
location: complement(join(68086..68167,68362..68412,69330..69500,70531..70674,71221..71421,72497..72607,73379..73558,75216..75371,76598..76945,81757..81990,83949..84078,84963..85080,85731..85803,87753..87956,88745..88986,89354..89561,90554..90673,93233..93292,94846..95010,97474..97663,106615..106736))
location: region:68086-106736:-1
so has part: feature:106615-106736:-1:exon
so has part: feature:97474-97663:-1:exon
so has part: feature:94846-95010:-1:exon
so has part: feature:93233-93292:-1:exon
so has part: feature:90554-90673:-1:exon
so has part: feature:89354-89561:-1:exon
so has part: feature:88745-88986:-1:exon
so has part: feature:87753-87956:-1:exon
so has part: feature:85731-85803:-1:exon
so has part: feature:84963-85080:-1:exon
so has part: feature:83949-84078:-1:exon
so has part: feature:81757-81990:-1:exon
so has part: feature:76598-76945:-1:exon
so has part: feature:75216-75371:-1:exon
so has part: feature:73379-73558:-1:exon
so has part: feature:72497-72607:-1:exon
so has part: feature:71221-71421:-1:exon
so has part: feature:70531-70674:-1:exon
so has part: feature:69330-69500:-1:exon
so has part: feature:68362-68412:-1:exon
so has part: feature:68086-68167:-1:exon

position:68086:-1
position: 68086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106615-106736:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:97474-97663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:94846-95010:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:93233-93292:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:90554-90673:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:89354-89561:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:88745-88986:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:87753-87956:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:85731-85803:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:84963-85080:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:83949-84078:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:81757-81990:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:76598-76945:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:75216-75371:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:73379-73558:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:72497-72607:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:71221-71421:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:70531-70674:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:69330-69500:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:68362-68412:-1:exon

position:68362:-1
position: 68362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68412:-1
position: 68412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:68086-68167:-1:exon

PRDM10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PRDM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 10 isoform X5
translation: MEHHGREEMDSKEESPQVWPDSAEQEPSTAQVHFVPEGGTVAQIVYSEEQDRPSQQVVYTADGTSYTSVDTSEHTLVYIHPVEATQTLFTDPSQVAYVQQDATTQQVTVLLPAAAQSMNPTNLSVLGNVAESPQQMALEQGPQADRASLPLHNQVLPPMEAVDGSDPLAPLQNQMGRMEPKEEDDEDEDEDEEGEDTDMDEWDPDPPRPFDPNDLWCEECNNAHPSVCPKHGPLHPIPNRPVLTRARASLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVRQAELKDCYIHLKVSLDKGDRKDRDLQEDLWFELSSEALCNWMMFVRPAQNHLEQNLVAYQYGHHIYYTTIKNVEPKQELKVWYAASYAEFVNQKIHDISEEERKVLREQEKNWPCYECNRRFMSSEQLQQHLNSHDEKLDFFSRARGRGRGRGKRRFGPGRRPGRPPKFIRLEVTSENGEKCEEGTQDLLHFSSKGQFDEAAGQATLNGLEQQEQTPVPSETQSALEQPFENHPLQIQPQQQEESTVPPQSTMTADDMRRAKRIRNAALQHLFIRKSFRPFKCLQCGKAFREKDKLDQHLRFHGREGNCPLTCDICNKGFINSGALESHMKFHMDQKTYSCIFCPESFDRLDLLKDHVAIHVSDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHMLRHSDRKDFLCSTCGKQFKRKDKLREHMQRMHNPEREAKKADRISRSKTFKPRIASTDYESFMFKCRLCMMGFRRRGMLVNHLSKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKSASKRKAHILKNHPGAELPPSIRKLRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQYSSKTKMVQHIRKKHPEFAQLPNTIHAPLATAVISSTPAVLTTDSTTGETVVTTDLLTQAMTEISQTLTTDYRTPQGDYQRIQYIPVSQSTTGLQQPQHIQLQVVQVAQTLEFESILCHRQPG
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
location: complement(join(68368..68412,69330..69500,70531..70674,71221..71421,72497..72607,73379..73558,75216..75371,76598..76945,81757..81990,83949..84078,84963..85080,85731..85803,87753..87956,88745..88986,89354..89561,90554..90673,93233..93292,94846..95010,97474..97566))
location: region:68368-97566:-1
so has part: feature:97474-97566:-1:exon
so has part: feature:94846-95010:-1:exon
so has part: feature:93233-93292:-1:exon
so has part: feature:90554-90673:-1:exon
so has part: feature:89354-89561:-1:exon
so has part: feature:88745-88986:-1:exon
so has part: feature:87753-87956:-1:exon
so has part: feature:85731-85803:-1:exon
so has part: feature:84963-85080:-1:exon
so has part: feature:83949-84078:-1:exon
so has part: feature:81757-81990:-1:exon
so has part: feature:76598-76945:-1:exon
so has part: feature:75216-75371:-1:exon
so has part: feature:73379-73558:-1:exon
so has part: feature:72497-72607:-1:exon
so has part: feature:71221-71421:-1:exon
so has part: feature:70531-70674:-1:exon
so has part: feature:69330-69500:-1:exon
so has part: feature:68368-68412:-1:exon

XP_030320615.1
type: Protein
SIO_000068: ncbiprotein

position:68368:-1
position: 68368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97474-97566:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94846-95010:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93233-93292:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:90554-90673:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89354-89561:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:88745-88986:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:87753-87956:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85731-85803:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:84963-85080:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:83949-84078:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:81757-81990:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:76598-76945:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:75216-75371:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:73379-73558:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:72497-72607:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:71221-71421:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:70531-70674:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:69330-69500:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:68368-68412:-1:exon

APLP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: APLP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 123210..168713
location: region:123210-168713:1
so has part: feature:123210-168713:1:exon
subclass of: SO_0000010

103532709
type: Gene
SIO_000068: ncbigene

position:123210:1
position: 123210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168713:1
position: 168713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123210-168713:1:exon

APLP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: APLP2
product: amyloid beta precursor like protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 53 ESTs, 7 long SRA reads, 28 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030464876.1
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: join(123210..123387,143938..144111,145000..145129,148368..148480,150359..150540,151076..151293,152965..153132,155065..155180,155552..155626,156783..156941,157433..157561,159509..159608,160111..160284,160870..160905,163724..163806,164644..164718,165146..165301,167105..168713)
location: region:123210-168713:1
so has part: feature:123210-123387:1:exon
so has part: feature:143938-144111:1:exon
so has part: feature:145000-145129:1:exon
so has part: feature:148368-148480:1:exon
so has part: feature:150359-150540:1:exon
so has part: feature:151076-151293:1:exon
so has part: feature:152965-153132:1:exon
so has part: feature:155065-155180:1:exon
so has part: feature:155552-155626:1:exon
so has part: feature:156783-156941:1:exon
so has part: feature:157433-157561:1:exon
so has part: feature:159509-159608:1:exon
so has part: feature:160111-160284:1:exon
so has part: feature:160870-160905:1:exon
so has part: feature:163724-163806:1:exon
so has part: feature:164644-164718:1:exon
so has part: feature:165146-165301:1:exon
so has part: feature:167105-168713:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:123210-123387:1:exon

position:123387:1
position: 123387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:143938-144111:1:exon

position:143938:1
position: 143938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144111:1
position: 144111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:145000-145129:1:exon

position:145000:1
position: 145000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145129:1
position: 145129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:148368-148480:1:exon

position:148368:1
position: 148368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148480:1
position: 148480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:150359-150540:1:exon

position:150359:1
position: 150359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150540:1
position: 150540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:151076-151293:1:exon

position:151076:1
position: 151076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151293:1
position: 151293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:152965-153132:1:exon

position:152965:1
position: 152965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153132:1
position: 153132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:155065-155180:1:exon

position:155065:1
position: 155065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155180:1
position: 155180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:155552-155626:1:exon

position:155552:1
position: 155552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155626:1
position: 155626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:156783-156941:1:exon

position:156783:1
position: 156783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156941:1
position: 156941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:157433-157561:1:exon

position:157433:1
position: 157433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157561:1
position: 157561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:159509-159608:1:exon

position:159509:1
position: 159509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159608:1
position: 159608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:160111-160284:1:exon

position:160111:1
position: 160111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160284:1
position: 160284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:160870-160905:1:exon

position:160870:1
position: 160870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160905:1
position: 160905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:163724-163806:1:exon

position:163724:1
position: 163724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163806:1
position: 163806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:164644-164718:1:exon

position:164644:1
position: 164644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164718:1
position: 164718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:165146-165301:1:exon

position:165146:1
position: 165146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165301:1
position: 165301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:167105-168713:1:exon

position:167105:1
position: 167105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

APLP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: APLP2
product: amyloid beta precursor like protein 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 ESTs, 9 long SRA reads, 17 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030464880.1
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: join(123230..123387,143938..144111,145000..145129,148368..148480,150359..150540,151076..151293,155065..155180,155552..155626,156783..156941,157433..157561,159509..159608,160111..160284,160870..160905,163724..163806,164644..164718,165146..165301,167105..168713)
location: region:123230-168713:1
so has part: feature:123230-123387:1:exon
so has part: feature:143938-144111:1:exon
so has part: feature:145000-145129:1:exon
so has part: feature:148368-148480:1:exon
so has part: feature:150359-150540:1:exon
so has part: feature:151076-151293:1:exon
so has part: feature:155065-155180:1:exon
so has part: feature:155552-155626:1:exon
so has part: feature:156783-156941:1:exon
so has part: feature:157433-157561:1:exon
so has part: feature:159509-159608:1:exon
so has part: feature:160111-160284:1:exon
so has part: feature:160870-160905:1:exon
so has part: feature:163724-163806:1:exon
so has part: feature:164644-164718:1:exon
so has part: feature:165146-165301:1:exon
so has part: feature:167105-168713:1:exon

position:123230:1
position: 123230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123230-123387:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143938-144111:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145000-145129:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148368-148480:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:150359-150540:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:151076-151293:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:155065-155180:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:155552-155626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:156783-156941:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:157433-157561:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:159509-159608:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:160111-160284:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:160870-160905:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:163724-163806:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:164644-164718:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:165146-165301:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:167105-168713:1:exon

APLP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: APLP2
product: amyloid beta precursor like protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030464877.1
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: join(123264..123387,143938..144111,145000..145129,148368..148480,150359..150540,151076..151293,152965..153132,155065..155180,155552..155626,156783..156941,157433..157561,159509..159608,160111..160284,160870..160905,163724..163803,164644..164718,165146..165301,167105..168713)
location: region:123264-168713:1
so has part: feature:123264-123387:1:exon
so has part: feature:143938-144111:1:exon
so has part: feature:145000-145129:1:exon
so has part: feature:148368-148480:1:exon
so has part: feature:150359-150540:1:exon
so has part: feature:151076-151293:1:exon
so has part: feature:152965-153132:1:exon
so has part: feature:155065-155180:1:exon
so has part: feature:155552-155626:1:exon
so has part: feature:156783-156941:1:exon
so has part: feature:157433-157561:1:exon
so has part: feature:159509-159608:1:exon
so has part: feature:160111-160284:1:exon
so has part: feature:160870-160905:1:exon
so has part: feature:163724-163803:1:exon
so has part: feature:164644-164718:1:exon
so has part: feature:165146-165301:1:exon
so has part: feature:167105-168713:1:exon

position:123264:1
position: 123264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123264-123387:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143938-144111:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145000-145129:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148368-148480:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:150359-150540:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:151076-151293:1:exon

urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
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urn:…
SIO_000300: 9
SIO_000628: feature:155552-155626:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:156783-156941:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:157433-157561:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:159509-159608:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:160111-160284:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:160870-160905:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:163724-163803:1:exon

position:163803:1
position: 163803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:164644-164718:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:165146-165301:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:167105-168713:1:exon

APLP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: APLP2
product: amyloid beta precursor like protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 58 ESTs, 1 long SRA read, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030464878.1
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: join(123264..123387,143938..144111,145000..145129,148368..148480,150359..150540,151076..151293,152965..153132,155065..155180,155552..155626,156783..156941,157433..157561,159509..159608,160111..160284,163724..163806,164644..164718,165146..165301,167105..168713)
location: region:123264-168713:1
so has part: feature:123264-123387:1:exon
so has part: feature:143938-144111:1:exon
so has part: feature:145000-145129:1:exon
so has part: feature:148368-148480:1:exon
so has part: feature:150359-150540:1:exon
so has part: feature:151076-151293:1:exon
so has part: feature:152965-153132:1:exon
so has part: feature:155065-155180:1:exon
so has part: feature:155552-155626:1:exon
so has part: feature:156783-156941:1:exon
so has part: feature:157433-157561:1:exon
so has part: feature:159509-159608:1:exon
so has part: feature:160111-160284:1:exon
so has part: feature:163724-163806:1:exon
so has part: feature:164644-164718:1:exon
so has part: feature:165146-165301:1:exon
so has part: feature:167105-168713:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:123264-123387:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143938-144111:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145000-145129:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148368-148480:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:150359-150540:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:151076-151293:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:152965-153132:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:155065-155180:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:155552-155626:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:156783-156941:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:157433-157561:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:159509-159608:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:160111-160284:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:163724-163806:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:164644-164718:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:165146-165301:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:167105-168713:1:exon

APLP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: APLP2
product: amyloid beta precursor like protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030464879.1
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: join(123264..123387,143938..144111,145000..145129,148368..148480,150359..150540,151076..151293,152965..153132,155065..155180,155552..155626,156783..156941,157433..157561,159509..159608,160111..160284,163724..163803,164644..164718,165146..165301,167105..168713)
location: region:123264-168713:1
so has part: feature:123264-123387:1:exon
so has part: feature:143938-144111:1:exon
so has part: feature:145000-145129:1:exon
so has part: feature:148368-148480:1:exon
so has part: feature:150359-150540:1:exon
so has part: feature:151076-151293:1:exon
so has part: feature:152965-153132:1:exon
so has part: feature:155065-155180:1:exon
so has part: feature:155552-155626:1:exon
so has part: feature:156783-156941:1:exon
so has part: feature:157433-157561:1:exon
so has part: feature:159509-159608:1:exon
so has part: feature:160111-160284:1:exon
so has part: feature:163724-163803:1:exon
so has part: feature:164644-164718:1:exon
so has part: feature:165146-165301:1:exon
so has part: feature:167105-168713:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:123264-123387:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143938-144111:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145000-145129:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148368-148480:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:150359-150540:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:151076-151293:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:152965-153132:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:155065-155180:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:155552-155626:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:156783-156941:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:157433-157561:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:159509-159608:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:160111-160284:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:163724-163803:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:164644-164718:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:165146-165301:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:167105-168713:1:exon

APLP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: APLP2
product: amyloid beta precursor like protein 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 ESTs, 2 long SRA reads, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030464881.1
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: join(123265..123387,143938..144111,145000..145129,148368..148480,150359..150540,151076..151293,155065..155180,155552..155626,156783..156941,157433..157561,159509..159608,160111..160284,163724..163806,164644..164718,165146..165301,167105..168713)
location: region:123265-168713:1
so has part: feature:123265-123387:1:exon
so has part: feature:143938-144111:1:exon
so has part: feature:145000-145129:1:exon
so has part: feature:148368-148480:1:exon
so has part: feature:150359-150540:1:exon
so has part: feature:151076-151293:1:exon
so has part: feature:155065-155180:1:exon
so has part: feature:155552-155626:1:exon
so has part: feature:156783-156941:1:exon
so has part: feature:157433-157561:1:exon
so has part: feature:159509-159608:1:exon
so has part: feature:160111-160284:1:exon
so has part: feature:163724-163806:1:exon
so has part: feature:164644-164718:1:exon
so has part: feature:165146-165301:1:exon
so has part: feature:167105-168713:1:exon

position:123265:1
position: 123265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123265-123387:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143938-144111:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145000-145129:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148368-148480:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:150359-150540:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:151076-151293:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:155065-155180:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:155552-155626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:156783-156941:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:157433-157561:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:159509-159608:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:160111-160284:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:163724-163806:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:164644-164718:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:165146-165301:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:167105-168713:1:exon

APLP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: APLP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-like protein 2 isoform X1
translation: MGSALHFPLLLLLALSGPAATLGGYIEALAANAGTGFAVAEPQIAMFCGKLNMHVNIQTGKWEPDPSGTKSCFGRKEEILQYCQEMYPDLQITNVVEANQPVGIDSWCKRGKKQCKDHAHIVVPYKCLVGEFVSDVLLVPEKCRFFHKERMDVCESHQHWHTVAKEACLTEGMILHSYGMLLPCGVDQFHGTEYVCCPQTKVVDEALSKEEEEEDEDEDEDYDVYKSEFPTEAGVEDFTGTAVEEDEDEEDEGEEEEEVAEDRDYYYDSYKVDDYNEEIPTEPTSDKAASEKEVSSDMKSVCSQEAMTGPCRAVMPRWYFDPNKRKCVRFIYGGCGGNRNNFESEEYCMAVCKKMMPTDDVDVYFETPADDNEHARFQKAKEQLEVRHHNRMDRVKKEWEEAEHQAVNLPKAERQTLIQHFQAMVKSLEKEAASEKQQLVETHLARVEAMLNDRRRIALENYLAALQADPPRPHRILQALKRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLHVIEERMNQSLSLLYKVPYVAEEIQDEIDELLQEQRADMDQFTSSISESQVDVRVSSEESEEIPLEGGKPFRPFQVKTFPALPESEDPQPDLYHPMRKGSGMTELDGLIGAEEKVINSKNKVDENVVIDETLDVKEMIFNAERVGGLVDEPDNDNSLRDDFSFSSSALIGLLVIAVAIATVIVISLVMLRKRQYGTISHGIVEVDPMLTPEERHLSKMQNHGYENPTYKYLEQMQI
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: join(123307..123387,143938..144111,145000..145129,148368..148480,150359..150540,151076..151293,152965..153132,155065..155180,155552..155626,156783..156941,157433..157561,159509..159608,160111..160284,160870..160905,163724..163806,164644..164718,165146..165301,167105..167206)
location: region:123307-167206:1
so has part: feature:123307-123387:1:exon
so has part: feature:143938-144111:1:exon
so has part: feature:145000-145129:1:exon
so has part: feature:148368-148480:1:exon
so has part: feature:150359-150540:1:exon
so has part: feature:151076-151293:1:exon
so has part: feature:152965-153132:1:exon
so has part: feature:155065-155180:1:exon
so has part: feature:155552-155626:1:exon
so has part: feature:156783-156941:1:exon
so has part: feature:157433-157561:1:exon
so has part: feature:159509-159608:1:exon
so has part: feature:160111-160284:1:exon
so has part: feature:160870-160905:1:exon
so has part: feature:163724-163806:1:exon
so has part: feature:164644-164718:1:exon
so has part: feature:165146-165301:1:exon
so has part: feature:167105-167206:1:exon

XP_030320736.1
type: Protein
SIO_000068: ncbiprotein

position:123307:1
position: 123307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167206:1
position: 167206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123307-123387:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143938-144111:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145000-145129:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148368-148480:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:150359-150540:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:151076-151293:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:152965-153132:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:155065-155180:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:155552-155626:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:156783-156941:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:157433-157561:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:159509-159608:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:160111-160284:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:160870-160905:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:163724-163806:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:164644-164718:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:165146-165301:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:167105-167206:1:exon

APLP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: APLP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-like protein 2 isoform X2
translation: MGSALHFPLLLLLALSGPAATLGGYIEALAANAGTGFAVAEPQIAMFCGKLNMHVNIQTGKWEPDPSGTKSCFGRKEEILQYCQEMYPDLQITNVVEANQPVGIDSWCKRGKKQCKDHAHIVVPYKCLVGEFVSDVLLVPEKCRFFHKERMDVCESHQHWHTVAKEACLTEGMILHSYGMLLPCGVDQFHGTEYVCCPQTKVVDEALSKEEEEEDEDEDEDYDVYKSEFPTEAGVEDFTGTAVEEDEDEEDEGEEEEEVAEDRDYYYDSYKVDDYNEEIPTEPTSDKAASEKEVSSDMKSVCSQEAMTGPCRAVMPRWYFDPNKRKCVRFIYGGCGGNRNNFESEEYCMAVCKKMMPTDDVDVYFETPADDNEHARFQKAKEQLEVRHHNRMDRVKKEWEEAEHQAVNLPKAERQTLIQHFQAMVKSLEKEAASEKQQLVETHLARVEAMLNDRRRIALENYLAALQADPPRPHRILQALKRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLHVIEERMNQSLSLLYKVPYVAEEIQDEIDELLQEQRADMDQFTSSISESQVDVRVSSEESEEIPLEGGKPFRPFQVKTFPALPESEDPQPDLYHPMRKGSGMTELDGLIGAEEKVINSKNKVDENVIDETLDVKEMIFNAERVGGLVDEPDNDNSLRDDFSFSSSALIGLLVIAVAIATVIVISLVMLRKRQYGTISHGIVEVDPMLTPEERHLSKMQNHGYENPTYKYLEQMQI
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: join(123307..123387,143938..144111,145000..145129,148368..148480,150359..150540,151076..151293,152965..153132,155065..155180,155552..155626,156783..156941,157433..157561,159509..159608,160111..160284,160870..160905,163724..163803,164644..164718,165146..165301,167105..167206)
location: region:123307-167206:1
so has part: feature:123307-123387:1:exon
so has part: feature:143938-144111:1:exon
so has part: feature:145000-145129:1:exon
so has part: feature:148368-148480:1:exon
so has part: feature:150359-150540:1:exon
so has part: feature:151076-151293:1:exon
so has part: feature:152965-153132:1:exon
so has part: feature:155065-155180:1:exon
so has part: feature:155552-155626:1:exon
so has part: feature:156783-156941:1:exon
so has part: feature:157433-157561:1:exon
so has part: feature:159509-159608:1:exon
so has part: feature:160111-160284:1:exon
so has part: feature:160870-160905:1:exon
so has part: feature:163724-163803:1:exon
so has part: feature:164644-164718:1:exon
so has part: feature:165146-165301:1:exon
so has part: feature:167105-167206:1:exon

XP_030320737.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123307-123387:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143938-144111:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145000-145129:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148368-148480:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:150359-150540:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:151076-151293:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:152965-153132:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:155065-155180:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:155552-155626:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:156783-156941:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:157433-157561:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:159509-159608:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:160111-160284:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:160870-160905:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:163724-163803:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:164644-164718:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:165146-165301:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:167105-167206:1:exon

APLP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: APLP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-like protein 2 isoform X3
translation: MGSALHFPLLLLLALSGPAATLGGYIEALAANAGTGFAVAEPQIAMFCGKLNMHVNIQTGKWEPDPSGTKSCFGRKEEILQYCQEMYPDLQITNVVEANQPVGIDSWCKRGKKQCKDHAHIVVPYKCLVGEFVSDVLLVPEKCRFFHKERMDVCESHQHWHTVAKEACLTEGMILHSYGMLLPCGVDQFHGTEYVCCPQTKVVDEALSKEEEEEDEDEDEDYDVYKSEFPTEAGVEDFTGTAVEEDEDEEDEGEEEEEVAEDRDYYYDSYKVDDYNEEIPTEPTSDKAASEKEVSSDMKSVCSQEAMTGPCRAVMPRWYFDPNKRKCVRFIYGGCGGNRNNFESEEYCMAVCKKMMPTDDVDVYFETPADDNEHARFQKAKEQLEVRHHNRMDRVKKEWEEAEHQAVNLPKAERQTLIQHFQAMVKSLEKEAASEKQQLVETHLARVEAMLNDRRRIALENYLAALQADPPRPHRILQALKRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLHVIEERMNQSLSLLYKVPYVAEEIQDEIDELLQEQRADMDQFTSSISESQVDVRVSSEESEEIPLEGGKPFRPFQVKTFPALPESEGSGMTELDGLIGAEEKVINSKNKVDENVVIDETLDVKEMIFNAERVGGLVDEPDNDNSLRDDFSFSSSALIGLLVIAVAIATVIVISLVMLRKRQYGTISHGIVEVDPMLTPEERHLSKMQNHGYENPTYKYLEQMQI
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: join(123307..123387,143938..144111,145000..145129,148368..148480,150359..150540,151076..151293,152965..153132,155065..155180,155552..155626,156783..156941,157433..157561,159509..159608,160111..160284,163724..163806,164644..164718,165146..165301,167105..167206)
location: region:123307-167206:1
so has part: feature:123307-123387:1:exon
so has part: feature:143938-144111:1:exon
so has part: feature:145000-145129:1:exon
so has part: feature:148368-148480:1:exon
so has part: feature:150359-150540:1:exon
so has part: feature:151076-151293:1:exon
so has part: feature:152965-153132:1:exon
so has part: feature:155065-155180:1:exon
so has part: feature:155552-155626:1:exon
so has part: feature:156783-156941:1:exon
so has part: feature:157433-157561:1:exon
so has part: feature:159509-159608:1:exon
so has part: feature:160111-160284:1:exon
so has part: feature:163724-163806:1:exon
so has part: feature:164644-164718:1:exon
so has part: feature:165146-165301:1:exon
so has part: feature:167105-167206:1:exon

XP_030320738.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123307-123387:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143938-144111:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145000-145129:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148368-148480:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:150359-150540:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:151076-151293:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:152965-153132:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:155065-155180:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:155552-155626:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:156783-156941:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:157433-157561:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:159509-159608:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:160111-160284:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:163724-163806:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:164644-164718:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:165146-165301:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:167105-167206:1:exon

APLP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: APLP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-like protein 2 isoform X4
translation: MGSALHFPLLLLLALSGPAATLGGYIEALAANAGTGFAVAEPQIAMFCGKLNMHVNIQTGKWEPDPSGTKSCFGRKEEILQYCQEMYPDLQITNVVEANQPVGIDSWCKRGKKQCKDHAHIVVPYKCLVGEFVSDVLLVPEKCRFFHKERMDVCESHQHWHTVAKEACLTEGMILHSYGMLLPCGVDQFHGTEYVCCPQTKVVDEALSKEEEEEDEDEDEDYDVYKSEFPTEAGVEDFTGTAVEEDEDEEDEGEEEEEVAEDRDYYYDSYKVDDYNEEIPTEPTSDKAASEKEVSSDMKSVCSQEAMTGPCRAVMPRWYFDPNKRKCVRFIYGGCGGNRNNFESEEYCMAVCKKMMPTDDVDVYFETPADDNEHARFQKAKEQLEVRHHNRMDRVKKEWEEAEHQAVNLPKAERQTLIQHFQAMVKSLEKEAASEKQQLVETHLARVEAMLNDRRRIALENYLAALQADPPRPHRILQALKRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLHVIEERMNQSLSLLYKVPYVAEEIQDEIDELLQEQRADMDQFTSSISESQVDVRVSSEESEEIPLEGGKPFRPFQVKTFPALPESEGSGMTELDGLIGAEEKVINSKNKVDENVIDETLDVKEMIFNAERVGGLVDEPDNDNSLRDDFSFSSSALIGLLVIAVAIATVIVISLVMLRKRQYGTISHGIVEVDPMLTPEERHLSKMQNHGYENPTYKYLEQMQI
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: join(123307..123387,143938..144111,145000..145129,148368..148480,150359..150540,151076..151293,152965..153132,155065..155180,155552..155626,156783..156941,157433..157561,159509..159608,160111..160284,163724..163803,164644..164718,165146..165301,167105..167206)
location: region:123307-167206:1
so has part: feature:123307-123387:1:exon
so has part: feature:143938-144111:1:exon
so has part: feature:145000-145129:1:exon
so has part: feature:148368-148480:1:exon
so has part: feature:150359-150540:1:exon
so has part: feature:151076-151293:1:exon
so has part: feature:152965-153132:1:exon
so has part: feature:155065-155180:1:exon
so has part: feature:155552-155626:1:exon
so has part: feature:156783-156941:1:exon
so has part: feature:157433-157561:1:exon
so has part: feature:159509-159608:1:exon
so has part: feature:160111-160284:1:exon
so has part: feature:163724-163803:1:exon
so has part: feature:164644-164718:1:exon
so has part: feature:165146-165301:1:exon
so has part: feature:167105-167206:1:exon

XP_030320739.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123307-123387:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143938-144111:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145000-145129:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148368-148480:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:150359-150540:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:151076-151293:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:152965-153132:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:155065-155180:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:155552-155626:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:156783-156941:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:157433-157561:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:159509-159608:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:160111-160284:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:163724-163803:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:164644-164718:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:165146-165301:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:167105-167206:1:exon

APLP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: APLP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-like protein 2 isoform X5
translation: MGSALHFPLLLLLALSGPAATLGGYIEALAANAGTGFAVAEPQIAMFCGKLNMHVNIQTGKWEPDPSGTKSCFGRKEEILQYCQEMYPDLQITNVVEANQPVGIDSWCKRGKKQCKDHAHIVVPYKCLVGEFVSDVLLVPEKCRFFHKERMDVCESHQHWHTVAKEACLTEGMILHSYGMLLPCGVDQFHGTEYVCCPQTKVVDEALSKEEEEEDEDEDEDYDVYKSEFPTEAGVEDFTGTAVEEDEDEEDEGEEEEEVAEDRDYYYDSYKVDDYNEEIPTEPTSDKAASEKEVSSDMKLPTDDVDVYFETPADDNEHARFQKAKEQLEVRHHNRMDRVKKEWEEAEHQAVNLPKAERQTLIQHFQAMVKSLEKEAASEKQQLVETHLARVEAMLNDRRRIALENYLAALQADPPRPHRILQALKRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLHVIEERMNQSLSLLYKVPYVAEEIQDEIDELLQEQRADMDQFTSSISESQVDVRVSSEESEEIPLEGGKPFRPFQVKTFPALPESEDPQPDLYHPMRKGSGMTELDGLIGAEEKVINSKNKVDENVVIDETLDVKEMIFNAERVGGLVDEPDNDNSLRDDFSFSSSALIGLLVIAVAIATVIVISLVMLRKRQYGTISHGIVEVDPMLTPEERHLSKMQNHGYENPTYKYLEQMQI
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: join(123307..123387,143938..144111,145000..145129,148368..148480,150359..150540,151076..151293,155065..155180,155552..155626,156783..156941,157433..157561,159509..159608,160111..160284,160870..160905,163724..163806,164644..164718,165146..165301,167105..167206)
location: region:123307-167206:1
so has part: feature:123307-123387:1:exon
so has part: feature:143938-144111:1:exon
so has part: feature:145000-145129:1:exon
so has part: feature:148368-148480:1:exon
so has part: feature:150359-150540:1:exon
so has part: feature:151076-151293:1:exon
so has part: feature:155065-155180:1:exon
so has part: feature:155552-155626:1:exon
so has part: feature:156783-156941:1:exon
so has part: feature:157433-157561:1:exon
so has part: feature:159509-159608:1:exon
so has part: feature:160111-160284:1:exon
so has part: feature:160870-160905:1:exon
so has part: feature:163724-163806:1:exon
so has part: feature:164644-164718:1:exon
so has part: feature:165146-165301:1:exon
so has part: feature:167105-167206:1:exon

XP_030320740.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123307-123387:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143938-144111:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145000-145129:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148368-148480:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:150359-150540:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:151076-151293:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:155065-155180:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:155552-155626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:156783-156941:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:157433-157561:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:159509-159608:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:160111-160284:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:160870-160905:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:163724-163806:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:164644-164718:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:165146-165301:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:167105-167206:1:exon

APLP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: APLP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-like protein 2 isoform X6
translation: MGSALHFPLLLLLALSGPAATLGGYIEALAANAGTGFAVAEPQIAMFCGKLNMHVNIQTGKWEPDPSGTKSCFGRKEEILQYCQEMYPDLQITNVVEANQPVGIDSWCKRGKKQCKDHAHIVVPYKCLVGEFVSDVLLVPEKCRFFHKERMDVCESHQHWHTVAKEACLTEGMILHSYGMLLPCGVDQFHGTEYVCCPQTKVVDEALSKEEEEEDEDEDEDYDVYKSEFPTEAGVEDFTGTAVEEDEDEEDEGEEEEEVAEDRDYYYDSYKVDDYNEEIPTEPTSDKAASEKEVSSDMKLPTDDVDVYFETPADDNEHARFQKAKEQLEVRHHNRMDRVKKEWEEAEHQAVNLPKAERQTLIQHFQAMVKSLEKEAASEKQQLVETHLARVEAMLNDRRRIALENYLAALQADPPRPHRILQALKRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLHVIEERMNQSLSLLYKVPYVAEEIQDEIDELLQEQRADMDQFTSSISESQVDVRVSSEESEEIPLEGGKPFRPFQVKTFPALPESEGSGMTELDGLIGAEEKVINSKNKVDENVVIDETLDVKEMIFNAERVGGLVDEPDNDNSLRDDFSFSSSALIGLLVIAVAIATVIVISLVMLRKRQYGTISHGIVEVDPMLTPEERHLSKMQNHGYENPTYKYLEQMQI
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: join(123307..123387,143938..144111,145000..145129,148368..148480,150359..150540,151076..151293,155065..155180,155552..155626,156783..156941,157433..157561,159509..159608,160111..160284,163724..163806,164644..164718,165146..165301,167105..167206)
location: region:123307-167206:1
so has part: feature:123307-123387:1:exon
so has part: feature:143938-144111:1:exon
so has part: feature:145000-145129:1:exon
so has part: feature:148368-148480:1:exon
so has part: feature:150359-150540:1:exon
so has part: feature:151076-151293:1:exon
so has part: feature:155065-155180:1:exon
so has part: feature:155552-155626:1:exon
so has part: feature:156783-156941:1:exon
so has part: feature:157433-157561:1:exon
so has part: feature:159509-159608:1:exon
so has part: feature:160111-160284:1:exon
so has part: feature:163724-163806:1:exon
so has part: feature:164644-164718:1:exon
so has part: feature:165146-165301:1:exon
so has part: feature:167105-167206:1:exon

XP_030320741.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123307-123387:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143938-144111:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145000-145129:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148368-148480:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:150359-150540:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:151076-151293:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:155065-155180:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:155552-155626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:156783-156941:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:157433-157561:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:159509-159608:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:160111-160284:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:163724-163806:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:164644-164718:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:165146-165301:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:167105-167206:1:exon

LOC103532708
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103532708
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(176887..180199)
location: region:176887-180199:-1
so has part: feature:176887-180199:-1:exon
subclass of: SO_0000010

103532708
type: Gene
SIO_000068: ncbigene

position:176887:-1
position: 176887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180199:-1
position: 180199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176887-180199:-1:exon

LOC103532708
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103532708
product: transmembrane protein 45B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 31% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008498496.2
SIO_010081: LOC103532708
subclass of: SO_0000673
so part of: LOC103532708
location: complement(join(176887..177016,177293..177438,178521..178705,179000..179212,180013..180199))
location: region:176887-180199:-1
so has part: feature:180013-180199:-1:exon
so has part: feature:179000-179212:-1:exon
so has part: feature:178521-178705:-1:exon
so has part: feature:177293-177438:-1:exon
so has part: feature:176887-177016:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:180013-180199:-1:exon

position:180013:-1
position: 180013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:179000-179212:-1:exon

position:179000:-1
position: 179000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179212:-1
position: 179212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:178521-178705:-1:exon

position:178521:-1
position: 178521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178705:-1
position: 178705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:177293-177438:-1:exon

position:177293:-1
position: 177293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177438:-1
position: 177438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:176887-177016:-1:exon

position:177016:-1
position: 177016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103532708
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103532708
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 45B
translation: MPASFLGSALRGSFFFIFGLWWSMRYPLRYLRRKSNAESQPSHGVQQVEVFEGAVKAFFALAGILAEQFVPAGPHLQLYSPKTHSWVDLIPWHYTTIYLFFLLSGLVDIASHSPLKLPLGWDRLLLSLALLVEGLLFCFHDYSDAVLDHHLHSLLAVAAFAGAFCALLEVFLRDHIILETFRTSSFLLQGSWLWQIGFVLSPPWGGPGWDQSDLSNLEFLPMCFCWHYVGVLAVLAANSVASRCCNESCQLKFGDIDVELDCGFCLRRNKMGSRGALLPESSSDDK
SIO_010081: LOC103532708
subclass of: SO_0000673
so part of: LOC103532708
location: complement(join(176887..177016,177293..177438,178521..178705,179000..179212,180013..180199))
location: region:176887-180199:-1
so has part: feature:180013-180199:-1:exon
so has part: feature:179000-179212:-1:exon
so has part: feature:178521-178705:-1:exon
so has part: feature:177293-177438:-1:exon
so has part: feature:176887-177016:-1:exon

XP_008496718.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:180013-180199:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:179000-179212:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:178521-178705:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:177293-177438:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:176887-177016:-1:exon

LOC103532707
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103532707
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(189688..198638)
location: region:189688-198638:-1
so has part: feature:189688-198638:-1:exon
subclass of: SO_0000010

103532707
type: Gene
SIO_000068: ncbigene

position:189688:-1
position: 189688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198638:-1
position: 198638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189688-198638:-1:exon

LOC103532707
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103532707
product: transmembrane protein 45B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 20 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464811.1
SIO_010081: LOC103532707
subclass of: SO_0000673
so part of: LOC103532707
location: complement(join(189688..189805,190252..190394,190797..190981,191911..192126,192655..192856,196245..196327,198601..198638))
location: region:189688-198638:-1
so has part: feature:198601-198638:-1:exon
so has part: feature:196245-196327:-1:exon
so has part: feature:192655-192856:-1:exon
so has part: feature:191911-192126:-1:exon
so has part: feature:190797-190981:-1:exon
so has part: feature:190252-190394:-1:exon
so has part: feature:189688-189805:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:198601-198638:-1:exon

position:198601:-1
position: 198601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:196245-196327:-1:exon

position:196245:-1
position: 196245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196327:-1
position: 196327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:192655-192856:-1:exon

position:192655:-1
position: 192655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192856:-1
position: 192856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:191911-192126:-1:exon

position:191911:-1
position: 191911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192126:-1
position: 192126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:190797-190981:-1:exon

position:190797:-1
position: 190797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190981:-1
position: 190981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:190252-190394:-1:exon

position:190252:-1
position: 190252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190394:-1
position: 190394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:189688-189805:-1:exon

position:189805:-1
position: 189805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103532707
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103532707
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 45B
translation: MANFQGHALPGSFFLLFGLWWSVKYPLRYLNQKATKKSHRIYCFQRLDAIEGSIKIIFALIGMLAEQFVPDGPHLYLYIGESRDWVKLMNWQHTTMYLFYGLSGVVDVLTYTSPSVVPRGLDHLMLSLAVFVEGFLFYYHIFHRPMLDQHIHTLLLIAIFSGACSIMLEVFLRDNIILEMFRAGITIVQGTWFWQIGIVLFQPWGGPAWDEDHSNIMFLTMCFFWHWAAAVAILAINYTLAFCCIQQCQRHSREPYIGLGVRRQEGDPSSQTAFLNGSDEE
SIO_010081: LOC103532707
subclass of: SO_0000673
so part of: LOC103532707
location: complement(join(189688..189805,190252..190394,190797..190981,191911..192126,192655..192838))
location: region:189688-192838:-1
so has part: feature:192655-192838:-1:exon
so has part: feature:191911-192126:-1:exon
so has part: feature:190797-190981:-1:exon
so has part: feature:190252-190394:-1:exon
so has part: feature:189688-189805:-1:exon

XP_030320671.1
type: Protein
SIO_000068: ncbiprotein

position:192838:-1
position: 192838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192655-192838:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:191911-192126:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:190797-190981:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:190252-190394:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:189688-189805:-1:exon

BARX2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: BARX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(243807..276441)
location: region:243807-276441:-1
so has part: feature:243807-276441:-1:exon
subclass of: SO_0000010

103532740
type: Gene
SIO_000068: ncbigene

position:243807:-1
position: 243807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276441:-1
position: 276441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243807-276441:-1:exon

BARX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: BARX2
product: BARX homeobox 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 4 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464816.1
SIO_010081: BARX2
subclass of: SO_0000673
so part of: BARX2
location: complement(join(243807..244082,245260..245344,247689..247986,276055..276441))
location: region:243807-276441:-1
so has part: feature:276055-276441:-1:exon
so has part: feature:247689-247986:-1:exon
so has part: feature:245260-245344:-1:exon
so has part: feature:243807-244082:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:276055-276441:-1:exon

position:276055:-1
position: 276055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:247689-247986:-1:exon

position:247689:-1
position: 247689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247986:-1
position: 247986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:245260-245344:-1:exon

position:245260:-1
position: 245260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245344:-1
position: 245344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:243807-244082:-1:exon

position:244082:-1
position: 244082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BARX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: BARX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein BarH-like 2
translation: MHSQPQPRPQPRLRAARRRYKTFMIDEILSKETCDYFEKLSLYSVCPSLLVRPKPLHSCAGSPSLRTYPLISVITRQPSLVPHLIPAATSSRGLPAQSSSGSASSEAPTSEPQASSESEAEQPTPRLKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLKGGQEAPTKPKGRPKKNSIPTSEEIEAEEKMNSQAQSQSQEGSQAPEEPELIEEKPEVSLETEKPPEHVAEPYSEETTPLS
SIO_010081: BARX2
subclass of: SO_0000673
so part of: BARX2
location: complement(join(243831..244082,245260..245344,247689..247986,276055..276235))
location: region:243831-276235:-1
so has part: feature:276055-276235:-1:exon
so has part: feature:247689-247986:-1:exon
so has part: feature:245260-245344:-1:exon
so has part: feature:243831-244082:-1:exon

XP_030320676.1
type: Protein
SIO_000068: ncbiprotein

position:243831:-1
position: 243831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276235:-1
position: 276235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276055-276235:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:247689-247986:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:245260-245344:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:243831-244082:-1:exon

LOC115599602
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599602
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 312269..440667
location: region:312269-440667:1
so has part: feature:312269-440667:1:exon
subclass of: SO_0000010

115599602
type: Gene
SIO_000068: ncbigene

position:312269:1
position: 312269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440667:1
position: 440667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312269-440667:1:exon

LOC115599602
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC115599602
product: rho GTPase-activating protein 32-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464703.1
SIO_010081: LOC115599602
subclass of: SO_0000673
so part of: LOC115599602
location: join(312269..312382,388522..388630,400871..400962,402048..402089,402462..402546,431830..431916,440618..440667)
location: region:312269-440667:1
so has part: feature:312269-312382:1:exon
so has part: feature:388522-388630:1:exon
so has part: feature:400871-400962:1:exon
so has part: feature:402048-402089:1:exon
so has part: feature:402462-402546:1:exon
so has part: feature:431830-431916:1:exon
so has part: feature:440618-440667:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:312269-312382:1:exon

position:312382:1
position: 312382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:388522-388630:1:exon

position:388522:1
position: 388522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388630:1
position: 388630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:400871-400962:1:exon

position:400871:1
position: 400871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400962:1
position: 400962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:402048-402089:1:exon

position:402048:1
position: 402048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402089:1
position: 402089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:402462-402546:1:exon

position:402462:1
position: 402462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402546:1
position: 402546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:431830-431916:1:exon

position:431830:1
position: 431830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431916:1
position: 431916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:440618-440667:1:exon

position:440618:1
position: 440618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115599602
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC115599602
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 32-like
translation: MMKSSIHTEEDDFVPELQRSIHPRERPDWEETLSAMARGADIPDLPGELPLRTCGSTASMKVKNVKKYINPGLMGCDAFHRLSFTKGHFPKMAECAHFHYENVDFGNIQLSLPEEQNEVTRNGCESKELVYLVQISCQTLWLTF
SIO_010081: LOC115599602
subclass of: SO_0000673
so part of: LOC115599602
location: join(388523..388630,400871..400962,402048..402089,402462..402546,431830..431916,440618..440638)
location: region:388523-440638:1
so has part: feature:388523-388630:1:exon
so has part: feature:400871-400962:1:exon
so has part: feature:402048-402089:1:exon
so has part: feature:402462-402546:1:exon
so has part: feature:431830-431916:1:exon
so has part: feature:440618-440638:1:exon

XP_030320563.1
type: Protein
SIO_000068: ncbiprotein

position:388523:1
position: 388523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440638:1
position: 440638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:388523-388630:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:400871-400962:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:402048-402089:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:402462-402546:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:431830-431916:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:440618-440638:1:exon

ARHGAP32
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ARHGAP32
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 465726..511633
location: region:465726-511633:1
so has part: feature:465726-511633:1:exon
subclass of: SO_0000010

103532706
type: Gene
SIO_000068: ncbigene

position:465726:1
position: 465726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511633:1
position: 511633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465726-511633:1:exon

ARHGAP32
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ARHGAP32
product: Rho GTPase activating protein 32, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 13 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464694.1
SIO_010081: ARHGAP32
subclass of: SO_0000673
so part of: ARHGAP32
location: join(465726..465800,483481..483631,494430..494532,496973..497117,497648..497730,499330..499437,499889..500034,501685..501886,502620..502765,503758..503832,504196..505050,505699..506615,507457..511633)
location: region:465726-511633:1
so has part: feature:465726-465800:1:exon
so has part: feature:483481-483631:1:exon
so has part: feature:494430-494532:1:exon
so has part: feature:496973-497117:1:exon
so has part: feature:497648-497730:1:exon
so has part: feature:499330-499437:1:exon
so has part: feature:499889-500034:1:exon
so has part: feature:501685-501886:1:exon
so has part: feature:502620-502765:1:exon
so has part: feature:503758-503832:1:exon
so has part: feature:504196-505050:1:exon
so has part: feature:505699-506615:1:exon
so has part: feature:507457-511633:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:465726-465800:1:exon

position:465800:1
position: 465800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:483481-483631:1:exon

position:483481:1
position: 483481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483631:1
position: 483631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:494430-494532:1:exon

position:494430:1
position: 494430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494532:1
position: 494532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:496973-497117:1:exon

position:496973:1
position: 496973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497117:1
position: 497117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:497648-497730:1:exon

position:497648:1
position: 497648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497730:1
position: 497730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:499330-499437:1:exon

position:499330:1
position: 499330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499437:1
position: 499437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:499889-500034:1:exon

position:499889:1
position: 499889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500034:1
position: 500034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:501685-501886:1:exon

position:501685:1
position: 501685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501886:1
position: 501886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:502620-502765:1:exon

position:502620:1
position: 502620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502765:1
position: 502765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:503758-503832:1:exon

position:503758:1
position: 503758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503832:1
position: 503832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:504196-505050:1:exon

position:504196:1
position: 504196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505050:1
position: 505050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:505699-506615:1:exon

position:505699:1
position: 505699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506615:1
position: 506615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:507457-511633:1:exon

position:507457:1
position: 507457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARHGAP32
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ARHGAP32
product: Rho GTPase activating protein 32, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 14 long SRA reads, 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030464693.1
SIO_010081: ARHGAP32
subclass of: SO_0000673
so part of: ARHGAP32
location: join(473516..473732,483481..483631,494430..494532,496973..497117,497648..497730,499330..499437,499889..500034,501685..501886,502620..502765,503758..503832,504196..505050,505699..506615,507457..511633)
location: region:473516-511633:1
so has part: feature:473516-473732:1:exon
so has part: feature:483481-483631:1:exon
so has part: feature:494430-494532:1:exon
so has part: feature:496973-497117:1:exon
so has part: feature:497648-497730:1:exon
so has part: feature:499330-499437:1:exon
so has part: feature:499889-500034:1:exon
so has part: feature:501685-501886:1:exon
so has part: feature:502620-502765:1:exon
so has part: feature:503758-503832:1:exon
so has part: feature:504196-505050:1:exon
so has part: feature:505699-506615:1:exon
so has part: feature:507457-511633:1:exon

position:473516:1
position: 473516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473516-473732:1:exon

position:473732:1
position: 473732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:483481-483631:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:494430-494532:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:496973-497117:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:497648-497730:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:499330-499437:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:499889-500034:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:501685-501886:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:502620-502765:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:503758-503832:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:504196-505050:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:505699-506615:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:507457-511633:1:exon

ARHGAP32
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ARHGAP32
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 32
translation: MKSRPTKQKLKQRGILKERVFGCDLGEHLLNSGHDVPQVLKSCTEFIEKHGIVDGIYRLSGIASNIQKLRHEFDSEQIPDLTKDIYIQDIHCVGSLCKLYFRELPNPLLTYQLYEKFSDAVSAATDEERLVKIHDVIQQLPPPHYRTLEFLMRHLARLADYCSITNMHTKNLAIVWAPNLLRSKQIESACFSGTAAFMEVRIQSVVVEFILNHVDVLFSSKLSSVIRDGAGHSSLSRPKSLLVSSPSTKLLTLEEAQARTQAQINSPIVADSKYIEVGEGPAALQGKFHTVIDFPSERKRPPSKMKKSPVGSWRSFFNLGKSSSVSKRKLQRNPSEPSEMKAIALAGGRGDSGTLRSAKSEESLTSLHAVDGESKLFRPRRPRSSSDALSASFNGELLGNMNRCNSYDNLPHDDSDGDEGLIHVPALISPRSAEDVDLSPPDIGVASLDFDPMSFQCSPPQAESECLDSSTSLLESIGINKEKPSLLKRDFESGSQSQTPGSATSSEPVSPFQEKMSPFFTLDLSPTEEKASKPQAFSPKMGRKPIKSPPLTASEPVSFTLPSRMAEAIGGVPITPRNSSASSWSKGIGITEITNRSPTQMSLPLKNSESEAGEGAHRELQHAQLVAAGKPELPEEGERPMSSSQNKTVPSGHTQPGAVALDSPQDPVPVSSVSLIPPPPPKNAARMLALALAESAQQASAQSQKRPGDAHSESTNCGEAEAGTALEKLHLSAGAPDKLHLYTGLPENCLHFQTGAPLEQDFQGSSSTPGEQNHPPGAPGNRDPPPLHPSMPGDMPGSRDAEQEQPSFHPGKAGDKDLFPSHGGDWEHPAQHPAGALPDWEPPTAEVSLDKPHLHTRLSGDKHHVPICTADDKLQSPPVLTAGEKSTPAPMPYLTTIPPAAAAEPNCRTPAAPAAAPADVTVLPAQRPLATGQPGPAPRQDHQAATGQVPAASTKASSGSNQVWGTTAPEKPPEPAPGFVPESGCTTRCSSSVPSSHQSHLEKPRETTRAPPLHLRSESVPTHSSYSFTPPVPPVRTLESKIAAAMHSNNTDAINNSNYHAFLSSSMLASSVEEALLPPPPPPPPKHSSLQSVYVPHPKPESIPEPSGPDSYLHHKAASIHQYRPESVPPHISYHPKPDQHQAYPPRSETPTAANTRYNTYTTQGKSTSTLHSKPRSRTEFVSSVSPTGLRNASYAEEAPPYPTIRRVQSLHVPTPAASTIRSVPISRTEVPPDDEPVYCPRPLYQYKPYQPHSDYHVTQLQPYFENGRVHYRYSPYSSSSGSSYYTTADGSFYDLDPYSTVRVRPFHPLPSRDFASYASRLQSKGLYRYPGLSAYPRGGLISHLAGKEHSFVSRDVPPAPDIKHMYMSWDLEDMEKYRMQSIRRESRTRQKVKGPVMSQYDNVAPLLQEELGGLDVIHLRSKSDPGKTGLLTVAEGKEGRYPAKAATPEGDERYYMQHPEPELERAHYHGAYGNGQAEKPSLPQKQSSTRSRKLHEPGCNTNEHRTHLQQEASHRQPSESKNGPPYPEYRPKGGPEPSDPITYQHSGAKYIPATQETLRLNHKEVRLAEDRPDLERSRARPTTSMEKHSRDCYKEEDHTASPMAPPPKPERSHSLRMQHPETMERDSALLYPYQTLGKRQSTMTVVSQYDNLEDYHTMPQHQRGGYVGGGGFVPPSFTHVHSRTYATALGQGAFLPTELCLQRPETEVHVE
SIO_010081: ARHGAP32
subclass of: SO_0000673
so part of: ARHGAP32
location: join(483526..483631,494430..494532,496973..497117,497648..497730,499330..499437,499889..500034,501685..501886,502620..502765,503758..503832,504196..505050,505699..506615,507457..509709)
location: region:483526-509709:1
so has part: feature:483526-483631:1:exon
so has part: feature:494430-494532:1:exon
so has part: feature:496973-497117:1:exon
so has part: feature:497648-497730:1:exon
so has part: feature:499330-499437:1:exon
so has part: feature:499889-500034:1:exon
so has part: feature:501685-501886:1:exon
so has part: feature:502620-502765:1:exon
so has part: feature:503758-503832:1:exon
so has part: feature:504196-505050:1:exon
so has part: feature:505699-506615:1:exon
so has part: feature:507457-509709:1:exon

XP_030320553.1
type: Protein
SIO_000068: ncbiprotein

position:483526:1
position: 483526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509709:1
position: 509709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483526-483631:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:494430-494532:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:496973-497117:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:497648-497730:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:499330-499437:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:499889-500034:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:501685-501886:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:502620-502765:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:503758-503832:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:504196-505050:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:505699-506615:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:507457-509709:1:exon

ARHGAP32
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ARHGAP32
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 32
translation: MKSRPTKQKLKQRGILKERVFGCDLGEHLLNSGHDVPQVLKSCTEFIEKHGIVDGIYRLSGIASNIQKLRHEFDSEQIPDLTKDIYIQDIHCVGSLCKLYFRELPNPLLTYQLYEKFSDAVSAATDEERLVKIHDVIQQLPPPHYRTLEFLMRHLARLADYCSITNMHTKNLAIVWAPNLLRSKQIESACFSGTAAFMEVRIQSVVVEFILNHVDVLFSSKLSSVIRDGAGHSSLSRPKSLLVSSPSTKLLTLEEAQARTQAQINSPIVADSKYIEVGEGPAALQGKFHTVIDFPSERKRPPSKMKKSPVGSWRSFFNLGKSSSVSKRKLQRNPSEPSEMKAIALAGGRGDSGTLRSAKSEESLTSLHAVDGESKLFRPRRPRSSSDALSASFNGELLGNMNRCNSYDNLPHDDSDGDEGLIHVPALISPRSAEDVDLSPPDIGVASLDFDPMSFQCSPPQAESECLDSSTSLLESIGINKEKPSLLKRDFESGSQSQTPGSATSSEPVSPFQEKMSPFFTLDLSPTEEKASKPQAFSPKMGRKPIKSPPLTASEPVSFTLPSRMAEAIGGVPITPRNSSASSWSKGIGITEITNRSPTQMSLPLKNSESEAGEGAHRELQHAQLVAAGKPELPEEGERPMSSSQNKTVPSGHTQPGAVALDSPQDPVPVSSVSLIPPPPPKNAARMLALALAESAQQASAQSQKRPGDAHSESTNCGEAEAGTALEKLHLSAGAPDKLHLYTGLPENCLHFQTGAPLEQDFQGSSSTPGEQNHPPGAPGNRDPPPLHPSMPGDMPGSRDAEQEQPSFHPGKAGDKDLFPSHGGDWEHPAQHPAGALPDWEPPTAEVSLDKPHLHTRLSGDKHHVPICTADDKLQSPPVLTAGEKSTPAPMPYLTTIPPAAAAEPNCRTPAAPAAAPADVTVLPAQRPLATGQPGPAPRQDHQAATGQVPAASTKASSGSNQVWGTTAPEKPPEPAPGFVPESGCTTRCSSSVPSSHQSHLEKPRETTRAPPLHLRSESVPTHSSYSFTPPVPPVRTLESKIAAAMHSNNTDAINNSNYHAFLSSSMLASSVEEALLPPPPPPPPKHSSLQSVYVPHPKPESIPEPSGPDSYLHHKAASIHQYRPESVPPHISYHPKPDQHQAYPPRSETPTAANTRYNTYTTQGKSTSTLHSKPRSRTEFVSSVSPTGLRNASYAEEAPPYPTIRRVQSLHVPTPAASTIRSVPISRTEVPPDDEPVYCPRPLYQYKPYQPHSDYHVTQLQPYFENGRVHYRYSPYSSSSGSSYYTTADGSFYDLDPYSTVRVRPFHPLPSRDFASYASRLQSKGLYRYPGLSAYPRGGLISHLAGKEHSFVSRDVPPAPDIKHMYMSWDLEDMEKYRMQSIRRESRTRQKVKGPVMSQYDNVAPLLQEELGGLDVIHLRSKSDPGKTGLLTVAEGKEGRYPAKAATPEGDERYYMQHPEPELERAHYHGAYGNGQAEKPSLPQKQSSTRSRKLHEPGCNTNEHRTHLQQEASHRQPSESKNGPPYPEYRPKGGPEPSDPITYQHSGAKYIPATQETLRLNHKEVRLAEDRPDLERSRARPTTSMEKHSRDCYKEEDHTASPMAPPPKPERSHSLRMQHPETMERDSALLYPYQTLGKRQSTMTVVSQYDNLEDYHTMPQHQRGGYVGGGGFVPPSFTHVHSRTYATALGQGAFLPTELCLQRPETEVHVE
SIO_010081: ARHGAP32
subclass of: SO_0000673
so part of: ARHGAP32
location: join(483526..483631,494430..494532,496973..497117,497648..497730,499330..499437,499889..500034,501685..501886,502620..502765,503758..503832,504196..505050,505699..506615,507457..509709)
location: region:483526-509709:1
so has part: feature:483526-483631:1:exon
so has part: feature:494430-494532:1:exon
so has part: feature:496973-497117:1:exon
so has part: feature:497648-497730:1:exon
so has part: feature:499330-499437:1:exon
so has part: feature:499889-500034:1:exon
so has part: feature:501685-501886:1:exon
so has part: feature:502620-502765:1:exon
so has part: feature:503758-503832:1:exon
so has part: feature:504196-505050:1:exon
so has part: feature:505699-506615:1:exon
so has part: feature:507457-509709:1:exon

XP_030320554.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:483526-483631:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:494430-494532:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:496973-497117:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:497648-497730:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:499330-499437:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:499889-500034:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:501685-501886:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:502620-502765:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:503758-503832:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:504196-505050:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:505699-506615:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:507457-509709:1:exon

KCNJ5
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: KCNJ5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(545939..586266)
location: region:545939-586266:-1
so has part: feature:545939-586266:-1:exon
subclass of: SO_0000010

103532705
type: Gene
SIO_000068: ncbigene

position:545939:-1
position: 545939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586266:-1
position: 586266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:545939-586266:-1:exon

KCNJ5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: KCNJ5
product: potassium inwardly rectifying channel subfamily J member 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 71 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_008498493.2
SIO_010081: KCNJ5
subclass of: SO_0000673
so part of: KCNJ5
location: complement(join(545939..546691,555091..556040,563779..563953,586212..586266))
location: region:545939-586266:-1
so has part: feature:586212-586266:-1:exon
so has part: feature:563779-563953:-1:exon
so has part: feature:555091-556040:-1:exon
so has part: feature:545939-546691:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:586212-586266:-1:exon

position:586212:-1
position: 586212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:563779-563953:-1:exon

position:563779:-1
position: 563779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563953:-1
position: 563953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:555091-556040:-1:exon

position:555091:-1
position: 555091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556040:-1
position: 556040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:545939-546691:-1:exon

position:546691:-1
position: 546691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KCNJ5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: KCNJ5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein-activated inward rectifier potassium channel 4
translation: MAGDSRIFMNQDMDIGVTSREPKKIPKQARDDVPIATDRTRLISAEGGKKPRQRYMEKSGKCNVHHGNVQETYRYLSDLFTTLVDLKWRFNLLVFTMVYTITWLFFGFIWWLIAYIRGDLDHLEDENWIPCVENLSGFVSAFLFSIETETTIGYGYRVITEKCPEGIILLLIQAILGSIVNAFMVGCMFVKISQPKKRAETLMFSNNAVISMRDEKLCLMFRVGDLRNSHIVEASIRAKLIKSKQTKEGEFIPLNQTDINVGFDTGDDRLFLVSPLIISHEINEKSPFWEMSRTQLEKEEFEIVVILEGMVEATGMTCQARSSYMDTEVLWGHRFTPVLTLEKDFYEVDYNSFHSTYETNTPVCCAKELAESRREGQLLSHLSSATLLSGGREAETPKGEEEEEEEEEAGGSEPAGLNGANGTAGEGKEDLPV
SIO_010081: KCNJ5
subclass of: SO_0000673
so part of: KCNJ5
location: complement(join(546333..546691,555091..556033))
location: region:546333-556033:-1
so has part: feature:555091-556033:-1:exon
so has part: feature:546333-546691:-1:exon

XP_008496715.1
type: Protein
SIO_000068: ncbiprotein

position:546333:-1
position: 546333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556033:-1
position: 556033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555091-556033:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:546333-546691:-1:exon

KCNJ1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: KCNJ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 584298..592995
location: region:584298-592995:1
so has part: feature:584298-592995:1:exon
subclass of: SO_0000010

103532704
type: Gene
SIO_000068: ncbigene

position:584298:1
position: 584298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592995:1
position: 592995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584298-592995:1:exon

KCNJ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: KCNJ1
product: potassium inwardly rectifying channel subfamily J member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins
transcript id: XM_008498492.2
SIO_010081: KCNJ1
subclass of: SO_0000673
so part of: KCNJ1
location: join(584298..584310,591875..592995)
location: region:584298-592995:1
so has part: feature:584298-584310:1:exon
so has part: feature:591875-592995:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:584298-584310:1:exon

position:584310:1
position: 584310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:591875-592995:1:exon

position:591875:1
position: 591875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCNJ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: KCNJ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-sensitive inward rectifier potassium channel 1
translation: MFNYLRKRFTRHIRERSRRRARLVSKDGRCNIEFGNVEQSRFVFLIDIWTTILDLRWRYKMTIFISAFLGSWFLFGLLWYVVAYIHKDLPEFNPSINHTPCVENINGLTSAFLFSLETQVTIGYGFRCVTEQCATAIFLLIFQSILGVIINSFMCGAILAKISRSKNRAKTITFSKNAVISKRGGKLCLLIRVANLRKSLLIGSHIYGKLLKTTITPEGETIILDQVNIEFIVDAGNENLFFISPLTIYHIIDKNSPFFHMAAETILQQDFELVVFLDGTVEATSATCQVRTSYIPEEVLWGYRFAPIVSKTKEGKYRVDFQNFSKTVAVETPHCAFCLYNEKAKAKEKKGYDNPGFVLSEVSETSDTKM
SIO_010081: KCNJ1
subclass of: SO_0000673
so part of: KCNJ1
location: 591883..592995
location: region:591883-592995:1
so has part: feature:591883-592995:1:exon

XP_008496714.1
type: Protein
SIO_000068: ncbiprotein

position:591883:1
position: 591883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:591883-592995:1:exon

FLI1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: FLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(602451..686699)
location: region:602451-686699:-1
so has part: feature:602451-686699:-1:exon
subclass of: SO_0000010

103532702
type: Gene
SIO_000068: ncbigene

position:602451:-1
position: 602451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686699:-1
position: 686699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:602451-686699:-1:exon

FLI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FLI1
product: Fli-1 proto-oncogene, ETS transcription factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464697.1
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: complement(join(602451..605040,605970..606017,607264..607326,608625..608690,620675..620743,627431..627634,630993..631147,638526..638737,684383..684464,686461..686699))
location: region:602451-686699:-1
so has part: feature:686461-686699:-1:exon
so has part: feature:684383-684464:-1:exon
so has part: feature:638526-638737:-1:exon
so has part: feature:630993-631147:-1:exon
so has part: feature:627431-627634:-1:exon
so has part: feature:620675-620743:-1:exon
so has part: feature:608625-608690:-1:exon
so has part: feature:607264-607326:-1:exon
so has part: feature:605970-606017:-1:exon
so has part: feature:602451-605040:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:686461-686699:-1:exon

position:686461:-1
position: 686461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:684383-684464:-1:exon

position:684383:-1
position: 684383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684464:-1
position: 684464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:638526-638737:-1:exon

position:638526:-1
position: 638526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638737:-1
position: 638737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:630993-631147:-1:exon

position:630993:-1
position: 630993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:631147:-1
position: 631147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:627431-627634:-1:exon

position:627431:-1
position: 627431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:627634:-1
position: 627634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:620675-620743:-1:exon

position:620675:-1
position: 620675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620743:-1
position: 620743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:608625-608690:-1:exon

position:608625:-1
position: 608625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:608690:-1
position: 608690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:607264-607326:-1:exon

position:607264:-1
position: 607264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607326:-1
position: 607326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:605970-606017:-1:exon

position:605970:-1
position: 605970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606017:-1
position: 606017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:602451-605040:-1:exon

position:605040:-1
position: 605040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FLI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FLI1
product: Fli-1 proto-oncogene, ETS transcription factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464695.1
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: complement(join(602451..605040,605970..606017,607264..607326,608625..608690,620675..620743,627431..627634,630993..631147,638526..638737,684356..684371))
location: region:602451-684371:-1
so has part: feature:684356-684371:-1:exon
so has part: feature:638526-638737:-1:exon
so has part: feature:630993-631147:-1:exon
so has part: feature:627431-627634:-1:exon
so has part: feature:620675-620743:-1:exon
so has part: feature:608625-608690:-1:exon
so has part: feature:607264-607326:-1:exon
so has part: feature:605970-606017:-1:exon
so has part: feature:602451-605040:-1:exon

position:684371:-1
position: 684371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:684356-684371:-1:exon

position:684356:-1
position: 684356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:638526-638737:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:630993-631147:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:627431-627634:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:620675-620743:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:608625-608690:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:607264-607326:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:605970-606017:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:602451-605040:-1:exon

FLI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FLI1
product: Fli-1 proto-oncogene, ETS transcription factor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 18 ESTs, 7 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_008498491.2
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: complement(join(602451..605040,605970..606017,607264..607326,620675..620743,627431..627634,630993..631147,638526..638737,674742..675071))
location: region:602451-675071:-1
so has part: feature:674742-675071:-1:exon
so has part: feature:638526-638737:-1:exon
so has part: feature:630993-631147:-1:exon
so has part: feature:627431-627634:-1:exon
so has part: feature:620675-620743:-1:exon
so has part: feature:607264-607326:-1:exon
so has part: feature:605970-606017:-1:exon
so has part: feature:602451-605040:-1:exon

position:675071:-1
position: 675071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:674742-675071:-1:exon

position:674742:-1
position: 674742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:638526-638737:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:630993-631147:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:627431-627634:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:620675-620743:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:607264-607326:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:605970-606017:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:602451-605040:-1:exon

FLI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FLI1
product: Fli-1 proto-oncogene, ETS transcription factor, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464699.1
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: complement(join(602451..605040,605970..606017,607264..607326,608625..608690,620675..620743,627431..627634,630993..631147,638526..638737,674742..674813))
location: region:602451-674813:-1
so has part: feature:674742-674813:-1:exon
so has part: feature:638526-638737:-1:exon
so has part: feature:630993-631147:-1:exon
so has part: feature:627431-627634:-1:exon
so has part: feature:620675-620743:-1:exon
so has part: feature:608625-608690:-1:exon
so has part: feature:607264-607326:-1:exon
so has part: feature:605970-606017:-1:exon
so has part: feature:602451-605040:-1:exon

position:674813:-1
position: 674813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:674742-674813:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638526-638737:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:630993-631147:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:627431-627634:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:620675-620743:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:608625-608690:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:607264-607326:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:605970-606017:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:602451-605040:-1:exon

FLI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FLI1
product: Fli-1 proto-oncogene, ETS transcription factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464698.1
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: complement(join(602451..605040,605970..606017,607264..607326,608625..608690,620675..620743,627431..627634,630993..631147,638526..638737,673096..673274))
location: region:602451-673274:-1
so has part: feature:673096-673274:-1:exon
so has part: feature:638526-638737:-1:exon
so has part: feature:630993-631147:-1:exon
so has part: feature:627431-627634:-1:exon
so has part: feature:620675-620743:-1:exon
so has part: feature:608625-608690:-1:exon
so has part: feature:607264-607326:-1:exon
so has part: feature:605970-606017:-1:exon
so has part: feature:602451-605040:-1:exon

position:673274:-1
position: 673274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:673096-673274:-1:exon

position:673096:-1
position: 673096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:638526-638737:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:630993-631147:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:627431-627634:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:620675-620743:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:608625-608690:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:607264-607326:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:605970-606017:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:602451-605040:-1:exon

FLI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Friend leukemia integration 1 transcription factor isoform X2
translation: MFQTVPDTSSYVKEALSVVSDDQSLFDSTYGAATQLPKADMTASGNPDYGQPHKINPLPPQQEWINQPVRVNVKREYDHMNGSRESPVDCSVNKCSKLVGAGTESNPMSYSTYMDEKNGPPPNMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYGLMEIDTTIFQNMDGKELCKMNKDDFLRTTSLYNTEVLLSHLSYLRESSSLLVYNTPSHTEASSRLATKEDPSYDAVRRTGWGNNMNSGLTKSPPVAGTQNVNKTTEQQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSSNASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESSMYKYPSDLPYMPSYHAHQQKVNFVPSHPSSMPVTSSSFFGAASPYWTPPAGSIYPNPNVPRHPNAHVSPHLGSYY
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: complement(join(604511..605040,605970..606017,607264..607326,608625..608690,620675..620743,627431..627634,630993..631147,638526..638737,684383..684421))
location: region:604511-684421:-1
so has part: feature:684383-684421:-1:exon
so has part: feature:638526-638737:-1:exon
so has part: feature:630993-631147:-1:exon
so has part: feature:627431-627634:-1:exon
so has part: feature:620675-620743:-1:exon
so has part: feature:608625-608690:-1:exon
so has part: feature:607264-607326:-1:exon
so has part: feature:605970-606017:-1:exon
so has part: feature:604511-605040:-1:exon

XP_030320557.1
type: Protein
SIO_000068: ncbiprotein

position:604511:-1
position: 604511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684421:-1
position: 684421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:684383-684421:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638526-638737:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:630993-631147:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:627431-627634:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:620675-620743:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:608625-608690:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:607264-607326:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:605970-606017:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:604511-605040:-1:exon

FLI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Friend leukemia integration 1 transcription factor isoform X3
translation: MDGTIKEALSVVSDDQSLFDSTYGAATQLPKADMTASGNPDYGQPHKINPLPPQQEWINQPVRVNVKREYDHMNGSRESPVDCSVNKCSKLVGAGTESNPMSYSTYMDEKNGPPPNMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYGLMEIDTTIFQNMDGKELCKMNKDDFLRTTSLYNTEVLLSHLSYLRESSSLLVYNTPSHTEASSRLATKEDPSYDAVRRTGWGNNMNSGLTKSPPVAGTQNVNKTTEQQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSSNASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESSMYKYPSDLPYMPSYHAHQQKVNFVPSHPSSMPVTSSSFFGAASPYWTPPAGSIYPNPNVPRHPNAHVSPHLGSYY
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: complement(join(604511..605040,605970..606017,607264..607326,608625..608690,620675..620743,627431..627634,630993..631147,638526..638737,673096..673113))
location: region:604511-673113:-1
so has part: feature:673096-673113:-1:exon
so has part: feature:638526-638737:-1:exon
so has part: feature:630993-631147:-1:exon
so has part: feature:627431-627634:-1:exon
so has part: feature:620675-620743:-1:exon
so has part: feature:608625-608690:-1:exon
so has part: feature:607264-607326:-1:exon
so has part: feature:605970-606017:-1:exon
so has part: feature:604511-605040:-1:exon

XP_030320558.1
type: Protein
SIO_000068: ncbiprotein

position:673113:-1
position: 673113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:673096-673113:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638526-638737:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:630993-631147:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:627431-627634:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:620675-620743:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:608625-608690:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:607264-607326:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:605970-606017:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:604511-605040:-1:exon

FLI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Friend leukemia integration 1 transcription factor isoform X4
translation: MTASGNPDYGQPHKINPLPPQQEWINQPVRVNVKREYDHMNGSRESPVDCSVNKCSKLVGAGTESNPMSYSTYMDEKNGPPPNMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYGLMEIDTTIFQNMDGKELCKMNKDDFLRTTSLYNTEVLLSHLSYLRESSSLLVYNTPSHTEASSRLATKEGPPVAGTQNVNKTTEQQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSSNASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESSMYKYPSDLPYMPSYHAHQQKVNFVPSHPSSMPVTSSSFFGAASPYWTPPAGSIYPNPNVPRHPNAHVSPHLGSYY
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: complement(join(604511..605040,605970..606017,607264..607326,620675..620743,627431..627634,630993..631147,638526..638656))
location: region:604511-638656:-1
so has part: feature:638526-638656:-1:exon
so has part: feature:630993-631147:-1:exon
so has part: feature:627431-627634:-1:exon
so has part: feature:620675-620743:-1:exon
so has part: feature:607264-607326:-1:exon
so has part: feature:605970-606017:-1:exon
so has part: feature:604511-605040:-1:exon

XP_008496713.2
type: Protein
SIO_000068: ncbiprotein

position:638656:-1
position: 638656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:638526-638656:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:630993-631147:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:627431-627634:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:620675-620743:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:607264-607326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:605970-606017:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:604511-605040:-1:exon

FLI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Friend leukemia integration 1 transcription factor isoform X1
translation: MTASGNPDYGQPHKINPLPPQQEWINQPVRVNVKREYDHMNGSRESPVDCSVNKCSKLVGAGTESNPMSYSTYMDEKNGPPPNMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYGLMEIDTTIFQNMDGKELCKMNKDDFLRTTSLYNTEVLLSHLSYLRESSSLLVYNTPSHTEASSRLATKEDPSYDAVRRTGWGNNMNSGLTKSPPVAGTQNVNKTTEQQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSSNASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESSMYKYPSDLPYMPSYHAHQQKVNFVPSHPSSMPVTSSSFFGAASPYWTPPAGSIYPNPNVPRHPNAHVSPHLGSYY
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: complement(join(604511..605040,605970..606017,607264..607326,608625..608690,620675..620743,627431..627634,630993..631147,638526..638656))
location: region:604511-638656:-1
so has part: feature:638526-638656:-1:exon
so has part: feature:630993-631147:-1:exon
so has part: feature:627431-627634:-1:exon
so has part: feature:620675-620743:-1:exon
so has part: feature:608625-608690:-1:exon
so has part: feature:607264-607326:-1:exon
so has part: feature:605970-606017:-1:exon
so has part: feature:604511-605040:-1:exon

XP_030320555.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:638526-638656:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:630993-631147:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:627431-627634:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:620675-620743:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:608625-608690:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:607264-607326:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:605970-606017:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:604511-605040:-1:exon

FLI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Friend leukemia integration 1 transcription factor isoform X1
translation: MTASGNPDYGQPHKINPLPPQQEWINQPVRVNVKREYDHMNGSRESPVDCSVNKCSKLVGAGTESNPMSYSTYMDEKNGPPPNMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYGLMEIDTTIFQNMDGKELCKMNKDDFLRTTSLYNTEVLLSHLSYLRESSSLLVYNTPSHTEASSRLATKEDPSYDAVRRTGWGNNMNSGLTKSPPVAGTQNVNKTTEQQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSSNASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESSMYKYPSDLPYMPSYHAHQQKVNFVPSHPSSMPVTSSSFFGAASPYWTPPAGSIYPNPNVPRHPNAHVSPHLGSYY
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: complement(join(604511..605040,605970..606017,607264..607326,608625..608690,620675..620743,627431..627634,630993..631147,638526..638656))
location: region:604511-638656:-1
so has part: feature:638526-638656:-1:exon
so has part: feature:630993-631147:-1:exon
so has part: feature:627431-627634:-1:exon
so has part: feature:620675-620743:-1:exon
so has part: feature:608625-608690:-1:exon
so has part: feature:607264-607326:-1:exon
so has part: feature:605970-606017:-1:exon
so has part: feature:604511-605040:-1:exon

XP_030320559.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:638526-638656:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:630993-631147:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:627431-627634:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:620675-620743:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:608625-608690:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:607264-607326:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:605970-606017:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:604511-605040:-1:exon

ETS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ETS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 753022..798093
location: region:753022-798093:1
so has part: feature:753022-798093:1:exon
subclass of: SO_0000010

103532701
type: Gene
SIO_000068: ncbigene

position:753022:1
position: 753022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:798093:1
position: 798093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:753022-798093:1:exon

ETS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ETS1
product: ETS proto-oncogene 1, transcription factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464702.1
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: join(753022..753179,774688..774782,775404..775599,778907..778984,779757..780005,783481..783741,792469..792587,793297..798093)
location: region:753022-798093:1
so has part: feature:753022-753179:1:exon
so has part: feature:774688-774782:1:exon
so has part: feature:775404-775599:1:exon
so has part: feature:778907-778984:1:exon
so has part: feature:779757-780005:1:exon
so has part: feature:783481-783741:1:exon
so has part: feature:792469-792587:1:exon
so has part: feature:793297-798093:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:753022-753179:1:exon

position:753179:1
position: 753179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:774688-774782:1:exon

position:774688:1
position: 774688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:774782:1
position: 774782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:775404-775599:1:exon

position:775404:1
position: 775404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:775599:1
position: 775599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:778907-778984:1:exon

position:778907:1
position: 778907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:778984:1
position: 778984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:779757-780005:1:exon

position:779757:1
position: 779757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:780005:1
position: 780005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:783481-783741:1:exon

position:783481:1
position: 783481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783741:1
position: 783741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:792469-792587:1:exon

position:792469:1
position: 792469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:792587:1
position: 792587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:793297-798093:1:exon

position:793297:1
position: 793297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ETS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ETS1
product: ETS proto-oncogene 1, transcription factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 7 ESTs, 27 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030464701.1
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: join(753023..753179,774688..774807,775399..775599,778907..778984,779757..780005,783481..783741,792469..792587,793297..798093)
location: region:753023-798093:1
so has part: feature:753023-753179:1:exon
so has part: feature:774688-774807:1:exon
so has part: feature:775399-775599:1:exon
so has part: feature:778907-778984:1:exon
so has part: feature:779757-780005:1:exon
so has part: feature:783481-783741:1:exon
so has part: feature:792469-792587:1:exon
so has part: feature:793297-798093:1:exon

position:753023:1
position: 753023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:753023-753179:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:774688-774807:1:exon

position:774807:1
position: 774807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:775399-775599:1:exon

position:775399:1
position: 775399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:778907-778984:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:779757-780005:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:783481-783741:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:792469-792587:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:793297-798093:1:exon

ETS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ETS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C-ets-1 isoform X1
translation: MKAAVDLTIIKTEKVDIELFPSPDMECADVPLLTPSSKEMMSQALKATFSGFAKEQQRLGIPKDPQQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKECFLELAPDFVGDILWEHLEILQKEEVKPYPANGANTTYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPISSEELLSLKYENDYPSVILRDPGQTDSLQTDYFTIKQEVVTPDNMCMGRASRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFQSLQRVPSYDSFDSEDYPTALPNHKPKGTFKDYVRDRADMNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: join(753110..753179,774688..774807,775399..775599,778907..778984,779757..780005,783481..783741,792469..792587,793297..793512)
location: region:753110-793512:1
so has part: feature:753110-753179:1:exon
so has part: feature:774688-774807:1:exon
so has part: feature:775399-775599:1:exon
so has part: feature:778907-778984:1:exon
so has part: feature:779757-780005:1:exon
so has part: feature:783481-783741:1:exon
so has part: feature:792469-792587:1:exon
so has part: feature:793297-793512:1:exon

XP_030320561.1
type: Protein
SIO_000068: ncbiprotein

position:753110:1
position: 753110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793512:1
position: 793512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:753110-753179:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:774688-774807:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:775399-775599:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:778907-778984:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:779757-780005:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:783481-783741:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:792469-792587:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:793297-793512:1:exon

ETS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ETS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C-ets-1 isoform X2
translation: MKAAVDLTIIKTEKVDIELFPSPDMECADVPLLTPSSKEMMSQALKATFSGFAKEQQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKECFLELAPDFVGDILWEHLEILQKEEVKPYPANGANTTYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPISSEELLSLKYENDYPSVILRDPGQTDSLQTDYFTIKQEVVTPDNMCMGRASRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFQSLQRVPSYDSFDSEDYPTALPNHKPKGTFKDYVRDRADMNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: join(753110..753179,774688..774782,775404..775599,778907..778984,779757..780005,783481..783741,792469..792587,793297..793512)
location: region:753110-793512:1
so has part: feature:753110-753179:1:exon
so has part: feature:774688-774782:1:exon
so has part: feature:775404-775599:1:exon
so has part: feature:778907-778984:1:exon
so has part: feature:779757-780005:1:exon
so has part: feature:783481-783741:1:exon
so has part: feature:792469-792587:1:exon
so has part: feature:793297-793512:1:exon

XP_030320562.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:753110-753179:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:774688-774782:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:775404-775599:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:778907-778984:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:779757-780005:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:783481-783741:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:792469-792587:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:793297-793512:1:exon

KIRREL3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: KIRREL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 956586..1227187
location: region:956586-1227187:1
so has part: feature:956586-1227187:1:exon
subclass of: SO_0000010

103532739
type: Gene
SIO_000068: ncbigene

position:956586:1
position: 956586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1227187:1
position: 1227187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:956586-1227187:1:exon

KIRREL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: KIRREL3
product: kirre like nephrin family adhesion molecule 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 51% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030464796.1
SIO_010081: KIRREL3
subclass of: SO_0000673
so part of: KIRREL3
location: join(956586..956664,1143313..1143390,1164611..1164760,1166419..1166568,1190824..1190981,1193030..1193180,1199279..1199384,1212129..1212277,1212650..1212777,1214428..1214554,1217377..1217477,1217571..1217769,1218702..1218737,1220534..1220641,1222589..1222698,1226281..1226366,1226743..1227187)
location: region:956586-1227187:1
so has part: feature:956586-956664:1:exon
so has part: feature:1143313-1143390:1:exon
so has part: feature:1164611-1164760:1:exon
so has part: feature:1166419-1166568:1:exon
so has part: feature:1190824-1190981:1:exon
so has part: feature:1193030-1193180:1:exon
so has part: feature:1199279-1199384:1:exon
so has part: feature:1212129-1212277:1:exon
so has part: feature:1212650-1212777:1:exon
so has part: feature:1214428-1214554:1:exon
so has part: feature:1217377-1217477:1:exon
so has part: feature:1217571-1217769:1:exon
so has part: feature:1218702-1218737:1:exon
so has part: feature:1220534-1220641:1:exon
so has part: feature:1222589-1222698:1:exon
so has part: feature:1226281-1226366:1:exon
so has part: feature:1226743-1227187:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:956586-956664:1:exon

position:956664:1
position: 956664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1143313-1143390:1:exon

position:1143313:1
position: 1143313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1143390:1
position: 1143390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1164611-1164760:1:exon

position:1164611:1
position: 1164611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1164760:1
position: 1164760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1166419-1166568:1:exon

position:1166419:1
position: 1166419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1166568:1
position: 1166568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1190824-1190981:1:exon

position:1190824:1
position: 1190824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1190981:1
position: 1190981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1193030-1193180:1:exon

position:1193030:1
position: 1193030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1193180:1
position: 1193180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1199279-1199384:1:exon

position:1199279:1
position: 1199279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1199384:1
position: 1199384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1212129-1212277:1:exon

position:1212129:1
position: 1212129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1212277:1
position: 1212277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1212650-1212777:1:exon

position:1212650:1
position: 1212650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1212777:1
position: 1212777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1214428-1214554:1:exon

position:1214428:1
position: 1214428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1214554:1
position: 1214554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1217377-1217477:1:exon

position:1217377:1
position: 1217377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1217477:1
position: 1217477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1217571-1217769:1:exon

position:1217571:1
position: 1217571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1217769:1
position: 1217769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1218702-1218737:1:exon

position:1218702:1
position: 1218702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1218737:1
position: 1218737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1220534-1220641:1:exon

position:1220534:1
position: 1220534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1220641:1
position: 1220641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1222589-1222698:1:exon

position:1222589:1
position: 1222589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1222698:1
position: 1222698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1226281-1226366:1:exon

position:1226281:1
position: 1226281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1226366:1
position: 1226366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1226743-1227187:1:exon

position:1226743:1
position: 1226743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KIRREL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: KIRREL3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: kin of IRRE-like protein 3
translation: MSAFQADLLLLLLGCFLLSHELGLPGRGCCLVLGFMYKEKYRRMTEGQASSFTQQPQDQVVIAGQAVTLPCAIPEYNGIVLWIKDGLALGVGRDLSSYPRYLVVGDHLSGEHHLKILRADLQDDAVYECQAIQAAIRSRPARLTVLVPPDDPVILGGPVISMRAGDPLNLTCHADNAKPAASILWLRKGEVINGATYSKTLLRDGKRESIMSTLFISPSDIENGESIVCRATNKAIPSGKETSVTIDIQHPPLVNLSVEPQPVLEDNTVKFHCSAKANPAVTQYRWAKKGQVIKEASGDFYETIVDHTFFSEPVSCEVTNALGSTNISRTVDVYFGPRMATEPQSLLVDLGSDAIFNCAWTGNPSLTIVWMKRGSGVVLSNENKLTLKSVRQEDAGKYVCRAVVPRVGAGEREVTLTVNGPPIISSTQTQHALHGQKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETVSTDEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQGTEMKSGAGIQAESVPMAVIIGVAVGAGVAFLVLMATIVAFCCARSQRNLKGVVSAKNDIRVEIVHKEPASGREAEEHPTIKQLMMDRGEFQQDSVLKQLEXLKEEEKEFQNLKDPTNGYYSVNTFKEHHSTPTISLSGCPADLRPTGKQRVPTGMSFTNIYSTLSGQSRLYDYSQRFVLGMGSSSIELCEREFQRGSLSDSSSFLDTQCDSSISSSGKQDTYVQFDKASKASASSSHHSQSSSQNSDPSRPLQRRMQTHV
SIO_010081: KIRREL3
subclass of: SO_0000673
so part of: KIRREL3
location: join(956604..956664,1143313..1143390,1164611..1164760,1166419..1166568,1190824..1190981,1193030..1193180,1199279..1199384,1212129..1212277,1212650..1212777,1214428..1214554,1217377..1217477,1217571..1217769,1218702..1218737,1220534..1220641,1222589..1222698,1226281..1226366,1226743..1227187)
location: region:956604-1227187:1
so has part: feature:956604-956664:1:exon
so has part: feature:1143313-1143390:1:exon
so has part: feature:1164611-1164760:1:exon
so has part: feature:1166419-1166568:1:exon
so has part: feature:1190824-1190981:1:exon
so has part: feature:1193030-1193180:1:exon
so has part: feature:1199279-1199384:1:exon
so has part: feature:1212129-1212277:1:exon
so has part: feature:1212650-1212777:1:exon
so has part: feature:1214428-1214554:1:exon
so has part: feature:1217377-1217477:1:exon
so has part: feature:1217571-1217769:1:exon
so has part: feature:1218702-1218737:1:exon
so has part: feature:1220534-1220641:1:exon
so has part: feature:1222589-1222698:1:exon
so has part: feature:1226281-1226366:1:exon
so has part: feature:1226743-1227187:1:exon

XP_030320656.1
type: Protein
SIO_000068: ncbiprotein

position:956604:1
position: 956604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:956604-956664:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1143313-1143390:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1164611-1164760:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1166419-1166568:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1190824-1190981:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1193030-1193180:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1199279-1199384:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1212129-1212277:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1212650-1212777:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1214428-1214554:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1217377-1217477:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1217571-1217769:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1218702-1218737:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1220534-1220641:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1222589-1222698:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1226281-1226366:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1226743-1227187:1:exon

ST3GAL4
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ST3GAL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1229298..1245210)
location: region:1229298-1245210:-1
so has part: feature:1229298-1245210:-1:exon
subclass of: SO_0000010

103532700
type: Gene
SIO_000068: ncbigene

position:1229298:-1
position: 1229298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1245210:-1
position: 1245210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1229298-1245210:-1:exon

ST3GAL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ST3GAL4
product: ST3 beta-galactoside alpha-2,3-sialyltransferase 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464858.1
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: complement(join(1229298..1229440,1229774..1229917,1230055..1230198,1230284..1230473,1230574..1230669,1230996..1231056,1231347..1231444,1231534..1231614,1232142..1232211,1232494..1232575,1237305..1237365,1245113..1245210))
location: region:1229298-1245210:-1
so has part: feature:1245113-1245210:-1:exon
so has part: feature:1237305-1237365:-1:exon
so has part: feature:1232494-1232575:-1:exon
so has part: feature:1232142-1232211:-1:exon
so has part: feature:1231534-1231614:-1:exon
so has part: feature:1231347-1231444:-1:exon
so has part: feature:1230996-1231056:-1:exon
so has part: feature:1230574-1230669:-1:exon
so has part: feature:1230284-1230473:-1:exon
so has part: feature:1230055-1230198:-1:exon
so has part: feature:1229774-1229917:-1:exon
so has part: feature:1229298-1229440:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1245113-1245210:-1:exon

position:1245113:-1
position: 1245113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1237305-1237365:-1:exon

position:1237305:-1
position: 1237305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1237365:-1
position: 1237365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1232494-1232575:-1:exon

position:1232494:-1
position: 1232494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1232575:-1
position: 1232575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1232142-1232211:-1:exon

position:1232142:-1
position: 1232142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1232211:-1
position: 1232211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1231534-1231614:-1:exon

position:1231534:-1
position: 1231534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1231614:-1
position: 1231614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1231347-1231444:-1:exon

position:1231347:-1
position: 1231347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1231444:-1
position: 1231444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1230996-1231056:-1:exon

position:1230996:-1
position: 1230996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1231056:-1
position: 1231056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1230574-1230669:-1:exon

position:1230574:-1
position: 1230574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1230669:-1
position: 1230669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1230284-1230473:-1:exon

position:1230284:-1
position: 1230284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1230473:-1
position: 1230473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1230055-1230198:-1:exon

position:1230055:-1
position: 1230055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1230198:-1
position: 1230198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1229774-1229917:-1:exon

position:1229774:-1
position: 1229774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1229917:-1
position: 1229917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1229298-1229440:-1:exon

position:1229440:-1
position: 1229440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ST3GAL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ST3GAL4
product: ST3 beta-galactoside alpha-2,3-sialyltransferase 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464857.1
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: complement(join(1229298..1229440,1229774..1229917,1230055..1230198,1230284..1230473,1230574..1230669,1230996..1231056,1231347..1231444,1231534..1231614,1232130..1232211,1232494..1232575,1237305..1237365,1245113..1245210))
location: region:1229298-1245210:-1
so has part: feature:1245113-1245210:-1:exon
so has part: feature:1237305-1237365:-1:exon
so has part: feature:1232494-1232575:-1:exon
so has part: feature:1232130-1232211:-1:exon
so has part: feature:1231534-1231614:-1:exon
so has part: feature:1231347-1231444:-1:exon
so has part: feature:1230996-1231056:-1:exon
so has part: feature:1230574-1230669:-1:exon
so has part: feature:1230284-1230473:-1:exon
so has part: feature:1230055-1230198:-1:exon
so has part: feature:1229774-1229917:-1:exon
so has part: feature:1229298-1229440:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1245113-1245210:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1237305-1237365:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1232494-1232575:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1232130-1232211:-1:exon

position:1232130:-1
position: 1232130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1231534-1231614:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1231347-1231444:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1230996-1231056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1230574-1230669:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1230284-1230473:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1230055-1230198:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1229774-1229917:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1229298-1229440:-1:exon

ST3GAL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ST3GAL4
product: ST3 beta-galactoside alpha-2,3-sialyltransferase 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464861.1
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: complement(join(1229298..1229440,1229774..1229917,1230055..1230198,1230284..1230473,1230574..1230669,1230996..1231056,1231347..1231444,1231534..1231614,1232142..1232211,1232494..1232575,1237305..1237365,1244212..1244265))
location: region:1229298-1244265:-1
so has part: feature:1244212-1244265:-1:exon
so has part: feature:1237305-1237365:-1:exon
so has part: feature:1232494-1232575:-1:exon
so has part: feature:1232142-1232211:-1:exon
so has part: feature:1231534-1231614:-1:exon
so has part: feature:1231347-1231444:-1:exon
so has part: feature:1230996-1231056:-1:exon
so has part: feature:1230574-1230669:-1:exon
so has part: feature:1230284-1230473:-1:exon
so has part: feature:1230055-1230198:-1:exon
so has part: feature:1229774-1229917:-1:exon
so has part: feature:1229298-1229440:-1:exon

position:1244265:-1
position: 1244265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1244212-1244265:-1:exon

position:1244212:-1
position: 1244212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1237305-1237365:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1232494-1232575:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1232142-1232211:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1231534-1231614:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1231347-1231444:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1230996-1231056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1230574-1230669:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1230284-1230473:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1230055-1230198:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1229774-1229917:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1229298-1229440:-1:exon

ST3GAL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ST3GAL4
product: ST3 beta-galactoside alpha-2,3-sialyltransferase 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464860.1
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: complement(join(1229298..1229440,1229774..1229917,1230055..1230198,1230284..1230473,1230574..1230669,1230996..1231056,1231347..1231444,1231534..1231614,1232130..1232211,1232494..1232575,1237305..1237365,1244212..1244265))
location: region:1229298-1244265:-1
so has part: feature:1244212-1244265:-1:exon
so has part: feature:1237305-1237365:-1:exon
so has part: feature:1232494-1232575:-1:exon
so has part: feature:1232130-1232211:-1:exon
so has part: feature:1231534-1231614:-1:exon
so has part: feature:1231347-1231444:-1:exon
so has part: feature:1230996-1231056:-1:exon
so has part: feature:1230574-1230669:-1:exon
so has part: feature:1230284-1230473:-1:exon
so has part: feature:1230055-1230198:-1:exon
so has part: feature:1229774-1229917:-1:exon
so has part: feature:1229298-1229440:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1244212-1244265:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1237305-1237365:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1232494-1232575:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1232130-1232211:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1231534-1231614:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1231347-1231444:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1230996-1231056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1230574-1230669:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1230284-1230473:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1230055-1230198:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1229774-1229917:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1229298-1229440:-1:exon

ST3GAL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ST3GAL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X2
translation: MPPPVLMKMINKSRGKLLGVLALFLVMVWYSLYREDSFYFPVQENKTTCAMGEVEKKAAQLIGNYTRDHPLFLQLKDYFWVKTPSPYELPYGTKGSEDVLLRLLAITRYSLPESIQSLKCRRCAVVGNGHRLRNSSMGETINTYDVVIRLNNAPVHGYEQDVGSKTTMRLFYPESAHFNPQMENNPDTLLVLVPFKPMDFQWMEAILNDKKRVRKGFWKQPPLIWDANPERVRVLNPYYMEVTAAKLLNLPMKQPRKVKQKPTTGLLAITLALHFCDLVHIAGFGYPDSANKKQTIHYYEQITLKSMAASEHNVSHEAVAIKKMLELGLVKNLTYF
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: complement(join(1229354..1229440,1229774..1229917,1230055..1230198,1230284..1230473,1230574..1230669,1230996..1231056,1231347..1231444,1231534..1231614,1232142..1232211,1232494..1232533))
location: region:1229354-1232533:-1
so has part: feature:1232494-1232533:-1:exon
so has part: feature:1232142-1232211:-1:exon
so has part: feature:1231534-1231614:-1:exon
so has part: feature:1231347-1231444:-1:exon
so has part: feature:1230996-1231056:-1:exon
so has part: feature:1230574-1230669:-1:exon
so has part: feature:1230284-1230473:-1:exon
so has part: feature:1230055-1230198:-1:exon
so has part: feature:1229774-1229917:-1:exon
so has part: feature:1229354-1229440:-1:exon

XP_030320718.1
type: Protein
SIO_000068: ncbiprotein

position:1229354:-1
position: 1229354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1232533:-1
position: 1232533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1232494-1232533:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1232142-1232211:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1231534-1231614:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1231347-1231444:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1230996-1231056:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1230574-1230669:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1230284-1230473:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1230055-1230198:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1229774-1229917:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1229354-1229440:-1:exon

ST3GAL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ST3GAL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X2
translation: MPPPVLMKMINKSRGKLLGVLALFLVMVWYSLYREDSFYFPVQENKTTCAMGEVEKKAAQLIGNYTRDHPLFLQLKDYFWVKTPSPYELPYGTKGSEDVLLRLLAITRYSLPESIQSLKCRRCAVVGNGHRLRNSSMGETINTYDVVIRLNNAPVHGYEQDVGSKTTMRLFYPESAHFNPQMENNPDTLLVLVPFKPMDFQWMEAILNDKKRVRKGFWKQPPLIWDANPERVRVLNPYYMEVTAAKLLNLPMKQPRKVKQKPTTGLLAITLALHFCDLVHIAGFGYPDSANKKQTIHYYEQITLKSMAASEHNVSHEAVAIKKMLELGLVKNLTYF
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: complement(join(1229354..1229440,1229774..1229917,1230055..1230198,1230284..1230473,1230574..1230669,1230996..1231056,1231347..1231444,1231534..1231614,1232142..1232211,1232494..1232533))
location: region:1229354-1232533:-1
so has part: feature:1232494-1232533:-1:exon
so has part: feature:1232142-1232211:-1:exon
so has part: feature:1231534-1231614:-1:exon
so has part: feature:1231347-1231444:-1:exon
so has part: feature:1230996-1231056:-1:exon
so has part: feature:1230574-1230669:-1:exon
so has part: feature:1230284-1230473:-1:exon
so has part: feature:1230055-1230198:-1:exon
so has part: feature:1229774-1229917:-1:exon
so has part: feature:1229354-1229440:-1:exon

XP_030320721.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1232494-1232533:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1232142-1232211:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1231534-1231614:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1231347-1231444:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1230996-1231056:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1230574-1230669:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1230284-1230473:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1230055-1230198:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1229774-1229917:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1229354-1229440:-1:exon

ST3GAL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ST3GAL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X1
translation: MPPPVLMKMINKSRGKLLGVLALFLVMVWYSLYREDRYIRLFYFPVQENKTTCAMGEVEKKAAQLIGNYTRDHPLFLQLKDYFWVKTPSPYELPYGTKGSEDVLLRLLAITRYSLPESIQSLKCRRCAVVGNGHRLRNSSMGETINTYDVVIRLNNAPVHGYEQDVGSKTTMRLFYPESAHFNPQMENNPDTLLVLVPFKPMDFQWMEAILNDKKRVRKGFWKQPPLIWDANPERVRVLNPYYMEVTAAKLLNLPMKQPRKVKQKPTTGLLAITLALHFCDLVHIAGFGYPDSANKKQTIHYYEQITLKSMAASEHNVSHEAVAIKKMLELGLVKNLTYF
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: complement(join(1229354..1229440,1229774..1229917,1230055..1230198,1230284..1230473,1230574..1230669,1230996..1231056,1231347..1231444,1231534..1231614,1232130..1232211,1232494..1232533))
location: region:1229354-1232533:-1
so has part: feature:1232494-1232533:-1:exon
so has part: feature:1232130-1232211:-1:exon
so has part: feature:1231534-1231614:-1:exon
so has part: feature:1231347-1231444:-1:exon
so has part: feature:1230996-1231056:-1:exon
so has part: feature:1230574-1230669:-1:exon
so has part: feature:1230284-1230473:-1:exon
so has part: feature:1230055-1230198:-1:exon
so has part: feature:1229774-1229917:-1:exon
so has part: feature:1229354-1229440:-1:exon

XP_030320717.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1232494-1232533:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1232130-1232211:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1231534-1231614:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1231347-1231444:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1230996-1231056:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1230574-1230669:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1230284-1230473:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1230055-1230198:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1229774-1229917:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1229354-1229440:-1:exon

ST3GAL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ST3GAL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4 isoform X1
translation: MPPPVLMKMINKSRGKLLGVLALFLVMVWYSLYREDRYIRLFYFPVQENKTTCAMGEVEKKAAQLIGNYTRDHPLFLQLKDYFWVKTPSPYELPYGTKGSEDVLLRLLAITRYSLPESIQSLKCRRCAVVGNGHRLRNSSMGETINTYDVVIRLNNAPVHGYEQDVGSKTTMRLFYPESAHFNPQMENNPDTLLVLVPFKPMDFQWMEAILNDKKRVRKGFWKQPPLIWDANPERVRVLNPYYMEVTAAKLLNLPMKQPRKVKQKPTTGLLAITLALHFCDLVHIAGFGYPDSANKKQTIHYYEQITLKSMAASEHNVSHEAVAIKKMLELGLVKNLTYF
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: complement(join(1229354..1229440,1229774..1229917,1230055..1230198,1230284..1230473,1230574..1230669,1230996..1231056,1231347..1231444,1231534..1231614,1232130..1232211,1232494..1232533))
location: region:1229354-1232533:-1
so has part: feature:1232494-1232533:-1:exon
so has part: feature:1232130-1232211:-1:exon
so has part: feature:1231534-1231614:-1:exon
so has part: feature:1231347-1231444:-1:exon
so has part: feature:1230996-1231056:-1:exon
so has part: feature:1230574-1230669:-1:exon
so has part: feature:1230284-1230473:-1:exon
so has part: feature:1230055-1230198:-1:exon
so has part: feature:1229774-1229917:-1:exon
so has part: feature:1229354-1229440:-1:exon

XP_030320720.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1232494-1232533:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1232130-1232211:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1231534-1231614:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1231347-1231444:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1230996-1231056:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1230574-1230669:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1230284-1230473:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1230055-1230198:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1229774-1229917:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1229354-1229440:-1:exon

DCPS
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: DCPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1247770..1258143)
location: region:1247770-1258143:-1
so has part: feature:1247770-1258143:-1:exon
subclass of: SO_0000010

103532738
type: Gene
SIO_000068: ncbigene

position:1247770:-1
position: 1247770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1258143:-1
position: 1258143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1247770-1258143:-1:exon

DCPS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: DCPS
product: decapping enzyme, scavenger
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_030464862.1
SIO_010081: DCPS
subclass of: SO_0000673
so part of: DCPS
location: complement(join(1247770..1248098,1248596..1248706,1251548..1251661,1253737..1253882,1257059..1257227,1257935..1258143))
location: region:1247770-1258143:-1
so has part: feature:1257935-1258143:-1:exon
so has part: feature:1257059-1257227:-1:exon
so has part: feature:1253737-1253882:-1:exon
so has part: feature:1251548-1251661:-1:exon
so has part: feature:1248596-1248706:-1:exon
so has part: feature:1247770-1248098:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1257935-1258143:-1:exon

position:1257935:-1
position: 1257935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1257059-1257227:-1:exon

position:1257059:-1
position: 1257059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1257227:-1
position: 1257227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1253737-1253882:-1:exon

position:1253737:-1
position: 1253737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1253882:-1
position: 1253882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1251548-1251661:-1:exon

position:1251548:-1
position: 1251548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1251661:-1
position: 1251661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1248596-1248706:-1:exon

position:1248596:-1
position: 1248596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1248706:-1
position: 1248706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1247770-1248098:-1:exon

position:1248098:-1
position: 1248098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DCPS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: DCPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: m7GpppX diphosphatase
translation: MAEELPRGKRRRPQEEEEEEGAGGDTPGEGTNSTSTTNTPLPFPLAQLQLRRVLRESARDKAVFLHGEITNPSGEGTDAVIILEKTPFREEKVLELLKKHRKLELQMSNDIYSTYHLFPPPELSEIKTTVVYPATEKHLQKYLRQEIHLVRETWEDYRDITLPFIQAQSFSTQWVYNILEKKAEADRILHENPDPRDGFVLLPDFKWNQNQLDDLYLIALVHRRDIKSLRDLTAEHLPLLRNILQEGKEAITKRFGVPGSQLRIYLHYQPSYYHLHVHFTALGYEAPGSWVERAHLLADVIDNLLTDPSYYQKRALTFALRADELLLKRFQEAGRV
SIO_010081: DCPS
subclass of: SO_0000673
so part of: DCPS
location: complement(join(1247832..1248098,1248596..1248706,1251548..1251661,1253737..1253882,1257059..1257227,1257935..1258138))
location: region:1247832-1258138:-1
so has part: feature:1257935-1258138:-1:exon
so has part: feature:1257059-1257227:-1:exon
so has part: feature:1253737-1253882:-1:exon
so has part: feature:1251548-1251661:-1:exon
so has part: feature:1248596-1248706:-1:exon
so has part: feature:1247832-1248098:-1:exon

XP_030320722.1
type: Protein
SIO_000068: ncbiprotein

position:1247832:-1
position: 1247832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1258138:-1
position: 1258138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1257935-1258138:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1257059-1257227:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1253737-1253882:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1251548-1251661:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1248596-1248706:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1247832-1248098:-1:exon

TIRAP
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: TIRAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1259468..1262749)
location: region:1259468-1262749:-1
so has part: feature:1259468-1262749:-1:exon
subclass of: SO_0000010

103532737
type: Gene
SIO_000068: ncbigene

position:1259468:-1
position: 1259468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1262749:-1
position: 1262749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1259468-1262749:-1:exon

TIRAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TIRAP
product: TIR domain containing adaptor protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030464919.1
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: complement(join(1259468..1259740,1259836..1260423,1260569..1260638,1260787..1260854,1260941..1261009,1262624..1262749))
location: region:1259468-1262749:-1
so has part: feature:1262624-1262749:-1:exon
so has part: feature:1260941-1261009:-1:exon
so has part: feature:1260787-1260854:-1:exon
so has part: feature:1260569-1260638:-1:exon
so has part: feature:1259836-1260423:-1:exon
so has part: feature:1259468-1259740:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1262624-1262749:-1:exon

position:1262624:-1
position: 1262624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1260941-1261009:-1:exon

position:1260941:-1
position: 1260941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1261009:-1
position: 1261009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1260787-1260854:-1:exon

position:1260787:-1
position: 1260787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1260854:-1
position: 1260854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1260569-1260638:-1:exon

position:1260569:-1
position: 1260569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1260638:-1
position: 1260638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1259836-1260423:-1:exon

position:1259836:-1
position: 1259836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1260423:-1
position: 1260423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1259468-1259740:-1:exon

position:1259740:-1
position: 1259740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TIRAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TIRAP
product: TIR domain containing adaptor protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464921.1
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: complement(join(1259468..1259740,1259836..1260423,1260569..1260638,1260787..1260854,1260941..1261009,1262509..1262603))
location: region:1259468-1262603:-1
so has part: feature:1262509-1262603:-1:exon
so has part: feature:1260941-1261009:-1:exon
so has part: feature:1260787-1260854:-1:exon
so has part: feature:1260569-1260638:-1:exon
so has part: feature:1259836-1260423:-1:exon
so has part: feature:1259468-1259740:-1:exon

position:1262603:-1
position: 1262603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1262509-1262603:-1:exon

position:1262509:-1
position: 1262509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1260941-1261009:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1260787-1260854:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1260569-1260638:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1259836-1260423:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1259468-1259740:-1:exon

TIRAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TIRAP
product: TIR domain containing adaptor protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_008498526.2
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: complement(join(1259468..1259740,1259836..1260423,1260569..1260618,1260787..1260854,1260941..1261219))
location: region:1259468-1261219:-1
so has part: feature:1260941-1261219:-1:exon
so has part: feature:1260787-1260854:-1:exon
so has part: feature:1260569-1260618:-1:exon
so has part: feature:1259836-1260423:-1:exon
so has part: feature:1259468-1259740:-1:exon

position:1261219:-1
position: 1261219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1260941-1261219:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1260787-1260854:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1260569-1260618:-1:exon

position:1260618:-1
position: 1260618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1259836-1260423:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1259468-1259740:-1:exon

TIRAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TIRAP
product: TIR domain containing adaptor protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030464918.1
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: complement(join(1259468..1259740,1259836..1260423,1260569..1260638,1260787..1260854,1260941..1261219))
location: region:1259468-1261219:-1
so has part: feature:1260941-1261219:-1:exon
so has part: feature:1260787-1260854:-1:exon
so has part: feature:1260569-1260638:-1:exon
so has part: feature:1259836-1260423:-1:exon
so has part: feature:1259468-1259740:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1260941-1261219:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1260787-1260854:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1260569-1260638:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1259836-1260423:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1259468-1259740:-1:exon

TIRAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TIRAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: toll/interleukin-1 receptor domain-containing adapter protein
translation: MAGWFRRFLHKPKPSSVESTPSASSPPPSSSSSTQSSISSPTPALVRSPQPSPIPDISAGGSARWAKSYDVCICHSPGDLEVVEELVSFLEGQPQRFRCFLHPRDAVPGGAVVTELCEAVHNSHCWVMLITPSFLGDPWCRYQMHQALAEAPVGNGRTIPVLKDVERKDYPRELRNLYYISMELKEKSFRQIRDTVVRYLQELCRGSWSGME
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: complement(join(1259697..1259740,1259836..1260423,1260569..1260575))
location: region:1259697-1260575:-1
so has part: feature:1260569-1260575:-1:exon
so has part: feature:1259836-1260423:-1:exon
so has part: feature:1259697-1259740:-1:exon

XP_030320778.1
type: Protein
SIO_000068: ncbiprotein

position:1259697:-1
position: 1259697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1260575:-1
position: 1260575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1260569-1260575:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1259836-1260423:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1259697-1259740:-1:exon

TIRAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TIRAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: toll/interleukin-1 receptor domain-containing adapter protein
translation: MAGWFRRFLHKPKPSSVESTPSASSPPPSSSSSTQSSISSPTPALVRSPQPSPIPDISAGGSARWAKSYDVCICHSPGDLEVVEELVSFLEGQPQRFRCFLHPRDAVPGGAVVTELCEAVHNSHCWVMLITPSFLGDPWCRYQMHQALAEAPVGNGRTIPVLKDVERKDYPRELRNLYYISMELKEKSFRQIRDTVVRYLQELCRGSWSGME
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: complement(join(1259697..1259740,1259836..1260423,1260569..1260575))
location: region:1259697-1260575:-1
so has part: feature:1260569-1260575:-1:exon
so has part: feature:1259836-1260423:-1:exon
so has part: feature:1259697-1259740:-1:exon

XP_030320779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1260569-1260575:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1259836-1260423:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1259697-1259740:-1:exon

TIRAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TIRAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: toll/interleukin-1 receptor domain-containing adapter protein
translation: MAGWFRRFLHKPKPSSVESTPSASSPPPSSSSSTQSSISSPTPALVRSPQPSPIPDISAGGSARWAKSYDVCICHSPGDLEVVEELVSFLEGQPQRFRCFLHPRDAVPGGAVVTELCEAVHNSHCWVMLITPSFLGDPWCRYQMHQALAEAPVGNGRTIPVLKDVERKDYPRELRNLYYISMELKEKSFRQIRDTVVRYLQELCRGSWSGME
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: complement(join(1259697..1259740,1259836..1260423,1260569..1260575))
location: region:1259697-1260575:-1
so has part: feature:1260569-1260575:-1:exon
so has part: feature:1259836-1260423:-1:exon
so has part: feature:1259697-1259740:-1:exon

XP_030320781.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1260569-1260575:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1259836-1260423:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1259697-1259740:-1:exon

TIRAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TIRAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: toll/interleukin-1 receptor domain-containing adapter protein
translation: MAGWFRRFLHKPKPSSVESTPSASSPPPSSSSSTQSSISSPTPALVRSPQPSPIPDISAGGSARWAKSYDVCICHSPGDLEVVEELVSFLEGQPQRFRCFLHPRDAVPGGAVVTELCEAVHNSHCWVMLITPSFLGDPWCRYQMHQALAEAPVGNGRTIPVLKDVERKDYPRELRNLYYISMELKEKSFRQIRDTVVRYLQELCRGSWSGME
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: complement(join(1259697..1259740,1259836..1260423,1260569..1260575))
location: region:1259697-1260575:-1
so has part: feature:1260569-1260575:-1:exon
so has part: feature:1259836-1260423:-1:exon
so has part: feature:1259697-1259740:-1:exon

XP_008496748.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1260569-1260575:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1259836-1260423:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1259697-1259740:-1:exon

FAM118B
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: FAM118B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1262967..1270098
location: region:1262967-1270098:1
so has part: feature:1262967-1270098:1:exon
subclass of: SO_0000010

103532736
type: Gene
SIO_000068: ncbigene

position:1262967:1
position: 1262967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1270098:1
position: 1270098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1262967-1270098:1:exon

FAM118B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FAM118B
product: family with sequence similarity 118 member B, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464715.1
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: join(1262967..1262989,1265772..1265849,1267175..1267427,1267784..1268011,1268511..1268639,1269064..1269349,1269711..1269761,1269876..1270098)
location: region:1262967-1270098:1
so has part: feature:1262967-1262989:1:exon
so has part: feature:1265772-1265849:1:exon
so has part: feature:1267175-1267427:1:exon
so has part: feature:1267784-1268011:1:exon
so has part: feature:1268511-1268639:1:exon
so has part: feature:1269064-1269349:1:exon
so has part: feature:1269711-1269761:1:exon
so has part: feature:1269876-1270098:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1262967-1262989:1:exon

position:1262989:1
position: 1262989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1265772-1265849:1:exon

position:1265772:1
position: 1265772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1265849:1
position: 1265849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1267175-1267427:1:exon

position:1267175:1
position: 1267175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1267427:1
position: 1267427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1267784-1268011:1:exon

position:1267784:1
position: 1267784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1268011:1
position: 1268011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1268511-1268639:1:exon

position:1268511:1
position: 1268511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1268639:1
position: 1268639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1269064-1269349:1:exon

position:1269064:1
position: 1269064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1269349:1
position: 1269349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1269711-1269761:1:exon

position:1269711:1
position: 1269711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1269761:1
position: 1269761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1269876-1270098:1:exon

position:1269876:1
position: 1269876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FAM118B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FAM118B
product: family with sequence similarity 118 member B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464714.1
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: join(1262970..1262989,1263363..1263408,1265772..1265849,1267175..1267427,1267784..1268011,1268511..1268639,1269064..1269349,1269711..1269761,1269876..1270098)
location: region:1262970-1270098:1
so has part: feature:1262970-1262989:1:exon
so has part: feature:1263363-1263408:1:exon
so has part: feature:1265772-1265849:1:exon
so has part: feature:1267175-1267427:1:exon
so has part: feature:1267784-1268011:1:exon
so has part: feature:1268511-1268639:1:exon
so has part: feature:1269064-1269349:1:exon
so has part: feature:1269711-1269761:1:exon
so has part: feature:1269876-1270098:1:exon

position:1262970:1
position: 1262970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1262970-1262989:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1263363-1263408:1:exon

position:1263363:1
position: 1263363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1263408:1
position: 1263408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1265772-1265849:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1267175-1267427:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1267784-1268011:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1268511-1268639:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1269064-1269349:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1269711-1269761:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1269876-1270098:1:exon

FAM118B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FAM118B
product: family with sequence similarity 118 member B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464713.1
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: join(1263722..1263783,1265772..1265849,1267175..1267427,1267784..1268011,1268511..1268639,1269064..1269349,1269711..1269761,1269876..1270098)
location: region:1263722-1270098:1
so has part: feature:1263722-1263783:1:exon
so has part: feature:1265772-1265849:1:exon
so has part: feature:1267175-1267427:1:exon
so has part: feature:1267784-1268011:1:exon
so has part: feature:1268511-1268639:1:exon
so has part: feature:1269064-1269349:1:exon
so has part: feature:1269711-1269761:1:exon
so has part: feature:1269876-1270098:1:exon

position:1263722:1
position: 1263722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1263722-1263783:1:exon

position:1263783:1
position: 1263783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1265772-1265849:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1267175-1267427:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1267784-1268011:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1268511-1268639:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1269064-1269349:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1269711-1269761:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1269876-1270098:1:exon

FAM118B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FAM118B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM118B isoform X3
translation: MSAACPFPGGQSLGNWMASTVSLGKETALGDGMPPAKKPRKLLPSLKTKKPQELVLVIGTGISAAVAPQVPALKSWKGLIQALLDAAIDFDLLEDEESKRFQKCLHEDKNLVHLAHDLIQKLSPRTSNVRSTFFKDCLYEVFDDLESKMEDSGKQLLQSVLDLMENGALVLTTNFDNLLELYASHQGKHLESLDLTDEKKVLEWAQEKRRLSVLHIHGVYTNPSGIVLHPAGYQNVLRNTEVMRAIQKLYENKSFLFLGCGWTVDDTTFQALFLEAVKHKSDLEHFMLVRRGDVDEFKKLRENMLDKGIKVISYGDDYADLPQYFERLASEITTRGRAGVPKEGQQLNGSAGDLTGHRS
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: join(1263743..1263783,1265772..1265849,1267175..1267427,1267784..1268011,1268511..1268639,1269064..1269349,1269711..1269761,1269876..1269889)
location: region:1263743-1269889:1
so has part: feature:1263743-1263783:1:exon
so has part: feature:1265772-1265849:1:exon
so has part: feature:1267175-1267427:1:exon
so has part: feature:1267784-1268011:1:exon
so has part: feature:1268511-1268639:1:exon
so has part: feature:1269064-1269349:1:exon
so has part: feature:1269711-1269761:1:exon
so has part: feature:1269876-1269889:1:exon

XP_030320573.1
type: Protein
SIO_000068: ncbiprotein

position:1263743:1
position: 1263743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1269889:1
position: 1269889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1263743-1263783:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1265772-1265849:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1267175-1267427:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1267784-1268011:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1268511-1268639:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1269064-1269349:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1269711-1269761:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1269876-1269889:1:exon

FAM118B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FAM118B
product: family with sequence similarity 118 member B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464711.1
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: join(1264249..1264419,1265772..1265849,1267175..1267427,1267784..1268011,1268511..1268639,1269064..1269349,1269711..1269761,1269876..1270098)
location: region:1264249-1270098:1
so has part: feature:1264249-1264419:1:exon
so has part: feature:1265772-1265849:1:exon
so has part: feature:1267175-1267427:1:exon
so has part: feature:1267784-1268011:1:exon
so has part: feature:1268511-1268639:1:exon
so has part: feature:1269064-1269349:1:exon
so has part: feature:1269711-1269761:1:exon
so has part: feature:1269876-1270098:1:exon

position:1264249:1
position: 1264249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1264249-1264419:1:exon

position:1264419:1
position: 1264419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1265772-1265849:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1267175-1267427:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1267784-1268011:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1268511-1268639:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1269064-1269349:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1269711-1269761:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1269876-1270098:1:exon

FAM118B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FAM118B
product: family with sequence similarity 118 member B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464712.1
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: join(1264249..1264419,1265772..1265849,1267175..1267427,1267784..1268011,1268511..1268639,1269145..1269349,1269711..1269761,1269876..1270098)
location: region:1264249-1270098:1
so has part: feature:1264249-1264419:1:exon
so has part: feature:1265772-1265849:1:exon
so has part: feature:1267175-1267427:1:exon
so has part: feature:1267784-1268011:1:exon
so has part: feature:1268511-1268639:1:exon
so has part: feature:1269145-1269349:1:exon
so has part: feature:1269711-1269761:1:exon
so has part: feature:1269876-1270098:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1264249-1264419:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1265772-1265849:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1267175-1267427:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1267784-1268011:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1268511-1268639:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1269145-1269349:1:exon

position:1269145:1
position: 1269145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1269711-1269761:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1269876-1270098:1:exon

FAM118B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FAM118B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM118B isoform X1
translation: MLRWGHSWISVPPGQQSCRAGAAPCLAESPGFVLRRNKHFFGDRRQLRNWMASTVSLGKETALGDGMPPAKKPRKLLPSLKTKKPQELVLVIGTGISAAVAPQVPALKSWKGLIQALLDAAIDFDLLEDEESKRFQKCLHEDKNLVHLAHDLIQKLSPRTSNVRSTFFKDCLYEVFDDLESKMEDSGKQLLQSVLDLMENGALVLTTNFDNLLELYASHQGKHLESLDLTDEKKVLEWAQEKRRLSVLHIHGVYTNPSGIVLHPAGYQNVLRNTEVMRAIQKLYENKSFLFLGCGWTVDDTTFQALFLEAVKHKSDLEHFMLVRRGDVDEFKKLRENMLDKGIKVISYGDDYADLPQYFERLASEITTRGRAGVPKEGQQLNGSAGDLTGHRS
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: join(1264277..1264419,1265772..1265849,1267175..1267427,1267784..1268011,1268511..1268639,1269064..1269349,1269711..1269761,1269876..1269889)
location: region:1264277-1269889:1
so has part: feature:1264277-1264419:1:exon
so has part: feature:1265772-1265849:1:exon
so has part: feature:1267175-1267427:1:exon
so has part: feature:1267784-1268011:1:exon
so has part: feature:1268511-1268639:1:exon
so has part: feature:1269064-1269349:1:exon
so has part: feature:1269711-1269761:1:exon
so has part: feature:1269876-1269889:1:exon

XP_030320571.1
type: Protein
SIO_000068: ncbiprotein

position:1264277:1
position: 1264277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1264277-1264419:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1265772-1265849:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1267175-1267427:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1267784-1268011:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1268511-1268639:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1269064-1269349:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1269711-1269761:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1269876-1269889:1:exon

FAM118B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FAM118B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM118B isoform X2
translation: MLRWGHSWISVPPGQQSCRAGAAPCLAESPGFVLRRNKHFFGDRRQLRNWMASTVSLGKETALGDGMPPAKKPRKLLPSLKTKKPQELVLVIGTGISAAVAPQVPALKSWKGLIQALLDAAIDFDLLEDEESKRFQKCLHEDKNLVHLAHDLIQKLSPRTSNVRSTFFKDCLYEVFDDLESKMEDSGKQLLQSVLDLMENGALVLTTNFDNLLELYASHQGKHLESLDLTDEKKVLEWAQEKRRLSVLHIHGVYTNPSGIVLHPAGYQNVLRNTEVMALFLEAVKHKSDLEHFMLVRRGDVDEFKKLRENMLDKGIKVISYGDDYADLPQYFERLASEITTRGRAGVPKEGQQLNGSAGDLTGHRS
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: join(1264277..1264419,1265772..1265849,1267175..1267427,1267784..1268011,1268511..1268639,1269145..1269349,1269711..1269761,1269876..1269889)
location: region:1264277-1269889:1
so has part: feature:1264277-1264419:1:exon
so has part: feature:1265772-1265849:1:exon
so has part: feature:1267175-1267427:1:exon
so has part: feature:1267784-1268011:1:exon
so has part: feature:1268511-1268639:1:exon
so has part: feature:1269145-1269349:1:exon
so has part: feature:1269711-1269761:1:exon
so has part: feature:1269876-1269889:1:exon

XP_030320572.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1264277-1264419:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1265772-1265849:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1267175-1267427:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1267784-1268011:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1268511-1268639:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1269145-1269349:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1269711-1269761:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1269876-1269889:1:exon

FAM118B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FAM118B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM118B isoform X4
translation: MASTVSLGKETALGDGMPPAKKPRKLLPSLKTKKPQELVLVIGTGISAAVAPQVPALKSWKGLIQALLDAAIDFDLLEDEESKRFQKCLHEDKNLVHLAHDLIQKLSPRTSNVRSTFFKDCLYEVFDDLESKMEDSGKQLLQSVLDLMENGALVLTTNFDNLLELYASHQGKHLESLDLTDEKKVLEWAQEKRRLSVLHIHGVYTNPSGIVLHPAGYQNVLRNTEVMRAIQKLYENKSFLFLGCGWTVDDTTFQALFLEAVKHKSDLEHFMLVRRGDVDEFKKLRENMLDKGIKVISYGDDYADLPQYFERLASEITTRGRAGVPKEGQQLNGSAGDLTGHRS
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: join(1265779..1265849,1267175..1267427,1267784..1268011,1268511..1268639,1269064..1269349,1269711..1269761,1269876..1269889)
location: region:1265779-1269889:1
so has part: feature:1265779-1265849:1:exon
so has part: feature:1267175-1267427:1:exon
so has part: feature:1267784-1268011:1:exon
so has part: feature:1268511-1268639:1:exon
so has part: feature:1269064-1269349:1:exon
so has part: feature:1269711-1269761:1:exon
so has part: feature:1269876-1269889:1:exon

XP_030320574.1
type: Protein
SIO_000068: ncbiprotein

position:1265779:1
position: 1265779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1265779-1265849:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1267175-1267427:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1267784-1268011:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1268511-1268639:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1269064-1269349:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1269711-1269761:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1269876-1269889:1:exon

FAM118B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FAM118B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM118B isoform X4
translation: MASTVSLGKETALGDGMPPAKKPRKLLPSLKTKKPQELVLVIGTGISAAVAPQVPALKSWKGLIQALLDAAIDFDLLEDEESKRFQKCLHEDKNLVHLAHDLIQKLSPRTSNVRSTFFKDCLYEVFDDLESKMEDSGKQLLQSVLDLMENGALVLTTNFDNLLELYASHQGKHLESLDLTDEKKVLEWAQEKRRLSVLHIHGVYTNPSGIVLHPAGYQNVLRNTEVMRAIQKLYENKSFLFLGCGWTVDDTTFQALFLEAVKHKSDLEHFMLVRRGDVDEFKKLRENMLDKGIKVISYGDDYADLPQYFERLASEITTRGRAGVPKEGQQLNGSAGDLTGHRS
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: join(1265779..1265849,1267175..1267427,1267784..1268011,1268511..1268639,1269064..1269349,1269711..1269761,1269876..1269889)
location: region:1265779-1269889:1
so has part: feature:1265779-1265849:1:exon
so has part: feature:1267175-1267427:1:exon
so has part: feature:1267784-1268011:1:exon
so has part: feature:1268511-1268639:1:exon
so has part: feature:1269064-1269349:1:exon
so has part: feature:1269711-1269761:1:exon
so has part: feature:1269876-1269889:1:exon

XP_030320575.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1265779-1265849:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1267175-1267427:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1267784-1268011:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1268511-1268639:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1269064-1269349:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1269711-1269761:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1269876-1269889:1:exon

SRPRA
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SRPRA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1270574..1276034)
location: region:1270574-1276034:-1
so has part: feature:1270574-1276034:-1:exon
subclass of: SO_0000010

103532735
type: Gene
SIO_000068: ncbigene

position:1270574:-1
position: 1270574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1276034:-1
position: 1276034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1270574-1276034:-1:exon

SRPRA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SRPRA
product: SRP receptor subunit alpha
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030464710.1
SIO_010081: SRPRA
subclass of: SO_0000673
so part of: SRPRA
location: complement(join(1270574..1271366,1271594..1271692,1271781..1271944,1272066..1272279,1272361..1272533,1272617..1272703,1272889..1273007,1273155..1273261,1273477..1273627,1273776..1273932,1274023..1274183,1274270..1274433,1275148..1275231,1275851..1276034))
location: region:1270574-1276034:-1
so has part: feature:1275851-1276034:-1:exon
so has part: feature:1275148-1275231:-1:exon
so has part: feature:1274270-1274433:-1:exon
so has part: feature:1274023-1274183:-1:exon
so has part: feature:1273776-1273932:-1:exon
so has part: feature:1273477-1273627:-1:exon
so has part: feature:1273155-1273261:-1:exon
so has part: feature:1272889-1273007:-1:exon
so has part: feature:1272617-1272703:-1:exon
so has part: feature:1272361-1272533:-1:exon
so has part: feature:1272066-1272279:-1:exon
so has part: feature:1271781-1271944:-1:exon
so has part: feature:1271594-1271692:-1:exon
so has part: feature:1270574-1271366:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1275851-1276034:-1:exon

position:1275851:-1
position: 1275851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1275148-1275231:-1:exon

position:1275148:-1
position: 1275148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1275231:-1
position: 1275231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1274270-1274433:-1:exon

position:1274270:-1
position: 1274270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1274433:-1
position: 1274433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1274023-1274183:-1:exon

position:1274023:-1
position: 1274023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1274183:-1
position: 1274183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1273776-1273932:-1:exon

position:1273776:-1
position: 1273776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1273932:-1
position: 1273932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1273477-1273627:-1:exon

position:1273477:-1
position: 1273477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1273627:-1
position: 1273627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1273155-1273261:-1:exon

position:1273155:-1
position: 1273155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1273261:-1
position: 1273261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1272889-1273007:-1:exon

position:1272889:-1
position: 1272889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1273007:-1
position: 1273007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1272617-1272703:-1:exon

position:1272617:-1
position: 1272617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1272703:-1
position: 1272703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1272361-1272533:-1:exon

position:1272361:-1
position: 1272361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1272533:-1
position: 1272533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1272066-1272279:-1:exon

position:1272066:-1
position: 1272066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1272279:-1
position: 1272279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1271781-1271944:-1:exon

position:1271781:-1
position: 1271781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1271944:-1
position: 1271944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1271594-1271692:-1:exon

position:1271594:-1
position: 1271594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1271692:-1
position: 1271692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1270574-1271366:-1:exon

position:1271366:-1
position: 1271366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SRPRA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SRPRA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal recognition particle receptor subunit alpha
translation: MLDFFTIFSKGGLVLWCFQGVRGPAATAPVNALIRSVLLQERGGNNSFTHEALTLKYKLDNQFELVFVVGFQKILTLTYVDKLIDDVHKEFRDKYRNEFQQKGTLGILNGTFDFKDDFMRLLREAEESSKVRAPTVMKTFEQSLKSQKTVKCMIETRGEKPKEKVKNKKNKGSKKEGTEAVAAAGKASGGEKQAPSASGDREELTKDEILQKNREEFFKRHSKAGEKSRSPKPEAQKEKGKKPRVWDLGNSNAKVLDYSNSAANGSTEASPLKEFDPETALGDRNREPGRLYDLEYESDDEAEEEKVVQNPSKPSAKKGGLGGMFGMLKGLVGSKSLTREDMDPVLEKMKDHLIAKNVAAEIAVQLCESVAKKLEGKVMGTFTTVTSTVKQALQEALVQILQPQRRVDVLRDVMDAQRHRRPYVVTFCGVNGVGKSTNLAKISFWLIENGFSVLIAACDTFRAGAVEQLRTHTRRLNALHPPESHGGRTMVQLYEKGYGKDAAGIAMEAISYARNQGFDVVLVDTAGRMQDNAPLMTALAKLIAVNAPDLVLFVGEALVGNEAVDQLVKFNKALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAALMKA
SIO_010081: SRPRA
subclass of: SO_0000673
so part of: SRPRA
location: complement(join(1271238..1271366,1271594..1271692,1271781..1271944,1272066..1272279,1272361..1272533,1272617..1272703,1272889..1273007,1273155..1273261,1273477..1273627,1273776..1273932,1274023..1274183,1274270..1274433,1275148..1275231,1275851..1275970))
location: region:1271238-1275970:-1
so has part: feature:1275851-1275970:-1:exon
so has part: feature:1275148-1275231:-1:exon
so has part: feature:1274270-1274433:-1:exon
so has part: feature:1274023-1274183:-1:exon
so has part: feature:1273776-1273932:-1:exon
so has part: feature:1273477-1273627:-1:exon
so has part: feature:1273155-1273261:-1:exon
so has part: feature:1272889-1273007:-1:exon
so has part: feature:1272617-1272703:-1:exon
so has part: feature:1272361-1272533:-1:exon
so has part: feature:1272066-1272279:-1:exon
so has part: feature:1271781-1271944:-1:exon
so has part: feature:1271594-1271692:-1:exon
so has part: feature:1271238-1271366:-1:exon

XP_030320570.1
type: Protein
SIO_000068: ncbiprotein

position:1271238:-1
position: 1271238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1275970:-1
position: 1275970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1275851-1275970:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1275148-1275231:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1274270-1274433:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1274023-1274183:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1273776-1273932:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1273477-1273627:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1273155-1273261:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1272889-1273007:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1272617-1272703:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1272361-1272533:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1272066-1272279:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1271781-1271944:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1271594-1271692:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1271238-1271366:-1:exon

FOXRED1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: FOXRED1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1276466..1280972
location: region:1276466-1280972:1
so has part: feature:1276466-1280972:1:exon
subclass of: SO_0000010

103532734
type: Gene
SIO_000068: ncbigene

position:1276466:1
position: 1276466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1280972:1
position: 1280972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1276466-1280972:1:exon

FOXRED1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FOXRED1
product: FAD dependent oxidoreductase domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030464716.1
SIO_010081: FOXRED1
subclass of: SO_0000673
so part of: FOXRED1
location: join(1276466..1276596,1277257..1277524,1277608..1277718,1277848..1277966,1278072..1278166,1278375..1278476,1278575..1278636,1278723..1278871,1280246..1280375,1280465..1280972)
location: region:1276466-1280972:1
so has part: feature:1276466-1276596:1:exon
so has part: feature:1277257-1277524:1:exon
so has part: feature:1277608-1277718:1:exon
so has part: feature:1277848-1277966:1:exon
so has part: feature:1278072-1278166:1:exon
so has part: feature:1278375-1278476:1:exon
so has part: feature:1278575-1278636:1:exon
so has part: feature:1278723-1278871:1:exon
so has part: feature:1280246-1280375:1:exon
so has part: feature:1280465-1280972:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1276466-1276596:1:exon

position:1276596:1
position: 1276596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1277257-1277524:1:exon

position:1277257:1
position: 1277257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1277524:1
position: 1277524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1277608-1277718:1:exon

position:1277608:1
position: 1277608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1277718:1
position: 1277718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1277848-1277966:1:exon

position:1277848:1
position: 1277848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1277966:1
position: 1277966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1278072-1278166:1:exon

position:1278072:1
position: 1278072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1278166:1
position: 1278166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1278375-1278476:1:exon

position:1278375:1
position: 1278375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1278476:1
position: 1278476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1278575-1278636:1:exon

position:1278575:1
position: 1278575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1278636:1
position: 1278636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1278723-1278871:1:exon

position:1278723:1
position: 1278723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1278871:1
position: 1278871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1280246-1280375:1:exon

position:1280246:1
position: 1280246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1280375:1
position: 1280375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1280465-1280972:1:exon

position:1280465:1
position: 1280465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FOXRED1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FOXRED1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FAD-dependent oxidoreductase domain-containing protein 1
translation: MLGSRRALCGLRGLPRYRGGSRTPSAPQHRHPPPQHRHFPPPLPTFPSELGPGLKSFVQTLKNQLPPLDGGIPGEGWTPPWTSLGPRPPEEADVVVVGGGVVGWSVAYWLKVLEGRRHGMKVLVVERDPTYSRASTVLSVGGIRQQFSLPENIRMSLFSASFLRNINEYLGVPNEPPIDLQFQPSGYLFLASPKDAAELEAAVQLQRKEGAQVALLSPTQLKEKFPWMSTEDVAVGSYGLENEGWFDPWTLLHAFRRKATSMGVCSCCGEVRGFVTSADNPQDPEAARITYVHVHMADSLEYQPVACAVVVNAAGAWAGELLRAKGLPGGLQGPPLPIQPRKRYVFSWHCPDGPGFSCPFLIDTSGAYFRRDGIAGNYLGGMSPPEEEEPDPSDLSVDDAFFQEQLWPRLARRVPAFESLKPRGSWAGYYDHNSFDQNGVLGPHPKLENLYVAAGFSGHGLQHAPAAGRAVAELVVRGGFQSLDLQRLGWERLREGQPLQEGGVV
SIO_010081: FOXRED1
subclass of: SO_0000673
so part of: FOXRED1
location: join(1276475..1276596,1277257..1277524,1277608..1277718,1277848..1277966,1278072..1278166,1278375..1278476,1278575..1278636,1278723..1278871,1280246..1280375,1280465..1280824)
location: region:1276475-1280824:1
so has part: feature:1276475-1276596:1:exon
so has part: feature:1277257-1277524:1:exon
so has part: feature:1277608-1277718:1:exon
so has part: feature:1277848-1277966:1:exon
so has part: feature:1278072-1278166:1:exon
so has part: feature:1278375-1278476:1:exon
so has part: feature:1278575-1278636:1:exon
so has part: feature:1278723-1278871:1:exon
so has part: feature:1280246-1280375:1:exon
so has part: feature:1280465-1280824:1:exon

XP_030320576.1
type: Protein
SIO_000068: ncbiprotein

position:1276475:1
position: 1276475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1280824:1
position: 1280824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1276475-1276596:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1277257-1277524:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1277608-1277718:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1277848-1277966:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1278072-1278166:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1278375-1278476:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1278575-1278636:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1278723-1278871:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1280246-1280375:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1280465-1280824:1:exon

EI24
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: EI24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1281821..1285879
location: region:1281821-1285879:1
so has part: feature:1281821-1285879:1:exon
subclass of: SO_0000010

103532698
type: Gene
SIO_000068: ncbigene

position:1281821:1
position: 1281821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1285879:1
position: 1285879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1281821-1285879:1:exon

EI24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: EI24
product: EI24 autophagy associated transmembrane protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 long SRA reads, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030464867.1
SIO_010081: EI24
subclass of: SO_0000673
so part of: EI24
location: join(1281821..1281918,1282626..1282773,1282860..1283005,1283311..1283371,1283689..1283755,1283840..1283964,1284062..1284181,1284706..1284817,1284910..1285021,1285121..1285195,1285314..1285879)
location: region:1281821-1285879:1
so has part: feature:1281821-1281918:1:exon
so has part: feature:1282626-1282773:1:exon
so has part: feature:1282860-1283005:1:exon
so has part: feature:1283311-1283371:1:exon
so has part: feature:1283689-1283755:1:exon
so has part: feature:1283840-1283964:1:exon
so has part: feature:1284062-1284181:1:exon
so has part: feature:1284706-1284817:1:exon
so has part: feature:1284910-1285021:1:exon
so has part: feature:1285121-1285195:1:exon
so has part: feature:1285314-1285879:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1281821-1281918:1:exon

position:1281918:1
position: 1281918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1282626-1282773:1:exon

position:1282626:1
position: 1282626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1282773:1
position: 1282773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1282860-1283005:1:exon

position:1282860:1
position: 1282860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1283005:1
position: 1283005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1283311-1283371:1:exon

position:1283311:1
position: 1283311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1283371:1
position: 1283371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1283689-1283755:1:exon

position:1283689:1
position: 1283689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1283755:1
position: 1283755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1283840-1283964:1:exon

position:1283840:1
position: 1283840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1283964:1
position: 1283964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1284062-1284181:1:exon

position:1284062:1
position: 1284062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1284181:1
position: 1284181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1284706-1284817:1:exon

position:1284706:1
position: 1284706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1284817:1
position: 1284817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1284910-1285021:1:exon

position:1284910:1
position: 1284910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1285021:1
position: 1285021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1285121-1285195:1:exon

position:1285121:1
position: 1285121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1285195:1
position: 1285195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1285314-1285879:1:exon

position:1285314:1
position: 1285314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EI24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: EI24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: etoposide-induced protein 2.4 homolog
translation: MADSVKTFLQDLVRGIKDSIWGICTISKLDARIQQKREEQRRRRANSALAQRRLHMEEKKQEAEPRIVSRIFQCCAWNGGVFWLSLFLFYRVFIPILQSVTAQIIGDPSLHGDVWSWLEFILTSIFSALWVLPLFVLSKVVNAIWFQDIADLAFEVSGRKPHPFPSVSKIIADMLFNLLLQALFLIQGMIVSLFPIDLVGQLIGLLHMALLYSLYCFEYRWFNKGIEMHQRLSNIERNWPYYFGFGLPLAFLTAMQSSYIISGCLFSILFPLFIISANEARTPAKTYHFQLRLFSLVVFLSNRLFHKTVYLQSALSAASSSSSSSSSSSSSPSPSKLPSAPGH
SIO_010081: EI24
subclass of: SO_0000673
so part of: EI24
location: join(1282732..1282773,1282860..1283005,1283311..1283371,1283689..1283755,1283840..1283964,1284062..1284181,1284706..1284817,1284910..1285021,1285121..1285195,1285314..1285485)
location: region:1282732-1285485:1
so has part: feature:1282732-1282773:1:exon
so has part: feature:1282860-1283005:1:exon
so has part: feature:1283311-1283371:1:exon
so has part: feature:1283689-1283755:1:exon
so has part: feature:1283840-1283964:1:exon
so has part: feature:1284062-1284181:1:exon
so has part: feature:1284706-1284817:1:exon
so has part: feature:1284910-1285021:1:exon
so has part: feature:1285121-1285195:1:exon
so has part: feature:1285314-1285485:1:exon

XP_030320727.1
type: Protein
SIO_000068: ncbiprotein

position:1282732:1
position: 1282732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1285485:1
position: 1285485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1282732-1282773:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1282860-1283005:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1283311-1283371:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1283689-1283755:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1283840-1283964:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1284062-1284181:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1284706-1284817:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1284910-1285021:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1285121-1285195:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1285314-1285485:1:exon

STT3A
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: STT3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1286307..1293392
location: region:1286307-1293392:1
so has part: feature:1286307-1293392:1:exon
subclass of: SO_0000010

103532697
type: Gene
SIO_000068: ncbigene

position:1286307:1
position: 1286307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1293392:1
position: 1293392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1286307-1293392:1:exon

STT3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: STT3A
product: STT3 oligosaccharyltransferase complex catalytic subunit A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 11 ESTs, 2 long SRA reads, 19 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030464812.1
SIO_010081: STT3A
subclass of: SO_0000673
so part of: STT3A
location: join(1286307..1286371,1287187..1287269,1287398..1287517,1287973..1288033,1288193..1288314,1288407..1288552,1288647..1288737,1289506..1289612,1289948..1290112,1290196..1290376,1290601..1290756,1290865..1290956,1291517..1291672,1291757..1291945,1292027..1292143,1292227..1292329,1292568..1292756,1292855..1292970,1293057..1293392)
location: region:1286307-1293392:1
so has part: feature:1286307-1286371:1:exon
so has part: feature:1287187-1287269:1:exon
so has part: feature:1287398-1287517:1:exon
so has part: feature:1287973-1288033:1:exon
so has part: feature:1288193-1288314:1:exon
so has part: feature:1288407-1288552:1:exon
so has part: feature:1288647-1288737:1:exon
so has part: feature:1289506-1289612:1:exon
so has part: feature:1289948-1290112:1:exon
so has part: feature:1290196-1290376:1:exon
so has part: feature:1290601-1290756:1:exon
so has part: feature:1290865-1290956:1:exon
so has part: feature:1291517-1291672:1:exon
so has part: feature:1291757-1291945:1:exon
so has part: feature:1292027-1292143:1:exon
so has part: feature:1292227-1292329:1:exon
so has part: feature:1292568-1292756:1:exon
so has part: feature:1292855-1292970:1:exon
so has part: feature:1293057-1293392:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1286307-1286371:1:exon

position:1286371:1
position: 1286371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1287187-1287269:1:exon

position:1287187:1
position: 1287187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1287269:1
position: 1287269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1287398-1287517:1:exon

position:1287398:1
position: 1287398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1287517:1
position: 1287517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1287973-1288033:1:exon

position:1287973:1
position: 1287973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1288033:1
position: 1288033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1288193-1288314:1:exon

position:1288193:1
position: 1288193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1288314:1
position: 1288314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1288407-1288552:1:exon

position:1288407:1
position: 1288407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1288552:1
position: 1288552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1288647-1288737:1:exon

position:1288647:1
position: 1288647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1288737:1
position: 1288737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1289506-1289612:1:exon

position:1289506:1
position: 1289506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1289612:1
position: 1289612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1289948-1290112:1:exon

position:1289948:1
position: 1289948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1290112:1
position: 1290112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1290196-1290376:1:exon

position:1290196:1
position: 1290196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1290376:1
position: 1290376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1290601-1290756:1:exon

position:1290601:1
position: 1290601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1290756:1
position: 1290756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1290865-1290956:1:exon

position:1290865:1
position: 1290865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1290956:1
position: 1290956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1291517-1291672:1:exon

position:1291517:1
position: 1291517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1291672:1
position: 1291672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1291757-1291945:1:exon

position:1291757:1
position: 1291757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1291945:1
position: 1291945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1292027-1292143:1:exon

position:1292027:1
position: 1292027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1292143:1
position: 1292143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1292227-1292329:1:exon

position:1292227:1
position: 1292227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1292329:1
position: 1292329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1292568-1292756:1:exon

position:1292568:1
position: 1292568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1292756:1
position: 1292756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1292855-1292970:1:exon

position:1292855:1
position: 1292855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1292970:1
position: 1292970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1293057-1293392:1:exon

position:1293057:1
position: 1293057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STT3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: STT3A
product: STT3 oligosaccharyltransferase complex catalytic subunit A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 11 ESTs, 1 long SRA read, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030464813.1
SIO_010081: STT3A
subclass of: SO_0000673
so part of: STT3A
location: join(1286311..1286371,1287187..1287269,1287410..1287517,1287973..1288033,1288193..1288314,1288407..1288552,1288647..1288737,1289506..1289612,1289948..1290112,1290196..1290376,1290601..1290756,1290865..1290956,1291517..1291672,1291757..1291945,1292027..1292143,1292227..1292329,1292568..1292756,1292855..1292970,1293057..1293392)
location: region:1286311-1293392:1
so has part: feature:1286311-1286371:1:exon
so has part: feature:1287187-1287269:1:exon
so has part: feature:1287410-1287517:1:exon
so has part: feature:1287973-1288033:1:exon
so has part: feature:1288193-1288314:1:exon
so has part: feature:1288407-1288552:1:exon
so has part: feature:1288647-1288737:1:exon
so has part: feature:1289506-1289612:1:exon
so has part: feature:1289948-1290112:1:exon
so has part: feature:1290196-1290376:1:exon
so has part: feature:1290601-1290756:1:exon
so has part: feature:1290865-1290956:1:exon
so has part: feature:1291517-1291672:1:exon
so has part: feature:1291757-1291945:1:exon
so has part: feature:1292027-1292143:1:exon
so has part: feature:1292227-1292329:1:exon
so has part: feature:1292568-1292756:1:exon
so has part: feature:1292855-1292970:1:exon
so has part: feature:1293057-1293392:1:exon

position:1286311:1
position: 1286311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1286311-1286371:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1287187-1287269:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1287410-1287517:1:exon

position:1287410:1
position: 1287410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1287973-1288033:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288193-1288314:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288407-1288552:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1288647-1288737:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1289506-1289612:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1289948-1290112:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1290196-1290376:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1290601-1290756:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1290865-1290956:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1291517-1291672:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1291757-1291945:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1292027-1292143:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1292227-1292329:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1292568-1292756:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1292855-1292970:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1293057-1293392:1:exon

STT3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: STT3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A
translation: MTKLGFLRLSYEKQDTLLKLLILSMAAVLSFSTRLFSVLRFESVIHEFDPYFNYRTTRFLAEEGFYKFHNWFDDRAWYPLGRIIGGTIYPGLMITSAAIYHVLHFFHITIDIRNVCVFLAPLFSSFTTIVTYHLTKELKDAGAGLLAAAMIAVVPGYISRSVAGSYDNEGIAIFCMLLTYYMWIKAVKTGSIYWAAMCALAYFYMVSSWGGYVFLINLIPLHVLVLMLTGRFSHRIYVAYCTVYCLGTILSMQISFVGFQPVLSSEHMAALGVFGLCQIHAFVDYLRSKLNPQQFEILFRSVISLVGFILLSIGAVLMLTGKISPWTGRFYSLLDPSYAKNNIPIIASVSEHQPTTWSSYYFDLQLLVFMFPVGLYYCFSNLSDARIFIIMYGVTSMYFSAVMVRLMLVLAPVMCILSGIGVSQVLSTYMKNLDISRPDKKSKKQQDSTYPIKNEVASGMILVMAFFLITYTFHSTWVTSEAYSSPSIVLSARGGDGSRIIFDDFREAYYWLRHNTPEDAKVMSWWDYGYQITAMANRTILVDNNTWNNTHISRVGQAMASTEEKAYEIMRELDVSYVLVIFGGLTGYSSDDINKFLWMVRIGGSTDTGRHIKEHDYYTPTGEFRVDREGSPVLLNCLMYKMCYYRFGQVYTEAKRPPGYDRVRNAEIGNKDFELDVLEEAYTTEHWLVRIYKVKDLDNRGLSRT
SIO_010081: STT3A
subclass of: SO_0000673
so part of: STT3A
location: join(1287430..1287517,1287973..1288033,1288193..1288314,1288407..1288552,1288647..1288737,1289506..1289612,1289948..1290112,1290196..1290376,1290601..1290756,1290865..1290956,1291517..1291672,1291757..1291945,1292027..1292143,1292227..1292329,1292568..1292756,1292855..1292970,1293057..1293095)
location: region:1287430-1293095:1
so has part: feature:1287430-1287517:1:exon
so has part: feature:1287973-1288033:1:exon
so has part: feature:1288193-1288314:1:exon
so has part: feature:1288407-1288552:1:exon
so has part: feature:1288647-1288737:1:exon
so has part: feature:1289506-1289612:1:exon
so has part: feature:1289948-1290112:1:exon
so has part: feature:1290196-1290376:1:exon
so has part: feature:1290601-1290756:1:exon
so has part: feature:1290865-1290956:1:exon
so has part: feature:1291517-1291672:1:exon
so has part: feature:1291757-1291945:1:exon
so has part: feature:1292027-1292143:1:exon
so has part: feature:1292227-1292329:1:exon
so has part: feature:1292568-1292756:1:exon
so has part: feature:1292855-1292970:1:exon
so has part: feature:1293057-1293095:1:exon

XP_030320672.1
type: Protein
SIO_000068: ncbiprotein

position:1287430:1
position: 1287430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1293095:1
position: 1293095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1287430-1287517:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1287973-1288033:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288193-1288314:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288407-1288552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288647-1288737:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1289506-1289612:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1289948-1290112:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1290196-1290376:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1290601-1290756:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1290865-1290956:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1291517-1291672:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1291757-1291945:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1292027-1292143:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1292227-1292329:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1292568-1292756:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1292855-1292970:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1293057-1293095:1:exon

STT3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: STT3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A
translation: MTKLGFLRLSYEKQDTLLKLLILSMAAVLSFSTRLFSVLRFESVIHEFDPYFNYRTTRFLAEEGFYKFHNWFDDRAWYPLGRIIGGTIYPGLMITSAAIYHVLHFFHITIDIRNVCVFLAPLFSSFTTIVTYHLTKELKDAGAGLLAAAMIAVVPGYISRSVAGSYDNEGIAIFCMLLTYYMWIKAVKTGSIYWAAMCALAYFYMVSSWGGYVFLINLIPLHVLVLMLTGRFSHRIYVAYCTVYCLGTILSMQISFVGFQPVLSSEHMAALGVFGLCQIHAFVDYLRSKLNPQQFEILFRSVISLVGFILLSIGAVLMLTGKISPWTGRFYSLLDPSYAKNNIPIIASVSEHQPTTWSSYYFDLQLLVFMFPVGLYYCFSNLSDARIFIIMYGVTSMYFSAVMVRLMLVLAPVMCILSGIGVSQVLSTYMKNLDISRPDKKSKKQQDSTYPIKNEVASGMILVMAFFLITYTFHSTWVTSEAYSSPSIVLSARGGDGSRIIFDDFREAYYWLRHNTPEDAKVMSWWDYGYQITAMANRTILVDNNTWNNTHISRVGQAMASTEEKAYEIMRELDVSYVLVIFGGLTGYSSDDINKFLWMVRIGGSTDTGRHIKEHDYYTPTGEFRVDREGSPVLLNCLMYKMCYYRFGQVYTEAKRPPGYDRVRNAEIGNKDFELDVLEEAYTTEHWLVRIYKVKDLDNRGLSRT
SIO_010081: STT3A
subclass of: SO_0000673
so part of: STT3A
location: join(1287430..1287517,1287973..1288033,1288193..1288314,1288407..1288552,1288647..1288737,1289506..1289612,1289948..1290112,1290196..1290376,1290601..1290756,1290865..1290956,1291517..1291672,1291757..1291945,1292027..1292143,1292227..1292329,1292568..1292756,1292855..1292970,1293057..1293095)
location: region:1287430-1293095:1
so has part: feature:1287430-1287517:1:exon
so has part: feature:1287973-1288033:1:exon
so has part: feature:1288193-1288314:1:exon
so has part: feature:1288407-1288552:1:exon
so has part: feature:1288647-1288737:1:exon
so has part: feature:1289506-1289612:1:exon
so has part: feature:1289948-1290112:1:exon
so has part: feature:1290196-1290376:1:exon
so has part: feature:1290601-1290756:1:exon
so has part: feature:1290865-1290956:1:exon
so has part: feature:1291517-1291672:1:exon
so has part: feature:1291757-1291945:1:exon
so has part: feature:1292027-1292143:1:exon
so has part: feature:1292227-1292329:1:exon
so has part: feature:1292568-1292756:1:exon
so has part: feature:1292855-1292970:1:exon
so has part: feature:1293057-1293095:1:exon

XP_030320673.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1287430-1287517:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1287973-1288033:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288193-1288314:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288407-1288552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288647-1288737:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1289506-1289612:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1289948-1290112:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1290196-1290376:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1290601-1290756:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1290865-1290956:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1291517-1291672:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1291757-1291945:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1292027-1292143:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1292227-1292329:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1292568-1292756:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1292855-1292970:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1293057-1293095:1:exon

CHEK1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: CHEK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1293972..1300147
location: region:1293972-1300147:1
so has part: feature:1293972-1300147:1:exon
subclass of: SO_0000010

103532696
type: Gene
SIO_000068: ncbigene

position:1293972:1
position: 1293972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1300147:1
position: 1300147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1293972-1300147:1:exon

CHEK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CHEK1
product: checkpoint kinase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030464798.1
SIO_010081: CHEK1
subclass of: SO_0000673
so part of: CHEK1
location: join(1293972..1294103,1294634..1294857,1294955..1295019,1295500..1295569,1295677..1295865,1296355..1296459,1296966..1297061,1297315..1297423,1298164..1298332,1299330..1299461,1299571..1299672,1299904..1300147)
location: region:1293972-1300147:1
so has part: feature:1293972-1294103:1:exon
so has part: feature:1294634-1294857:1:exon
so has part: feature:1294955-1295019:1:exon
so has part: feature:1295500-1295569:1:exon
so has part: feature:1295677-1295865:1:exon
so has part: feature:1296355-1296459:1:exon
so has part: feature:1296966-1297061:1:exon
so has part: feature:1297315-1297423:1:exon
so has part: feature:1298164-1298332:1:exon
so has part: feature:1299330-1299461:1:exon
so has part: feature:1299571-1299672:1:exon
so has part: feature:1299904-1300147:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1293972-1294103:1:exon

position:1294103:1
position: 1294103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1294634-1294857:1:exon

position:1294634:1
position: 1294634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1294857:1
position: 1294857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1294955-1295019:1:exon

position:1294955:1
position: 1294955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1295019:1
position: 1295019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1295500-1295569:1:exon

position:1295500:1
position: 1295500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1295569:1
position: 1295569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1295677-1295865:1:exon

position:1295677:1
position: 1295677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1295865:1
position: 1295865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1296355-1296459:1:exon

position:1296355:1
position: 1296355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1296459:1
position: 1296459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1296966-1297061:1:exon

position:1296966:1
position: 1296966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1297061:1
position: 1297061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1297315-1297423:1:exon

position:1297315:1
position: 1297315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1297423:1
position: 1297423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1298164-1298332:1:exon

position:1298164:1
position: 1298164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1298332:1
position: 1298332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1299330-1299461:1:exon

position:1299330:1
position: 1299330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1299461:1
position: 1299461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1299571-1299672:1:exon

position:1299571:1
position: 1299571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1299672:1
position: 1299672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1299904-1300147:1:exon

position:1299904:1
position: 1299904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHEK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CHEK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase Chk1
translation: MAVPFVEDWDLVQTLGEGAYGEVQLAVNRRTEEAVAVKIVDMKRAAECPENIKKEICINKMLNHENVVKFYGHRREGATQYLFLEYCSGGELFDRIEPDIGMPEHEAQRFFQQLIAGVVYLHSMGITHRDLKPENLLLDERDTLKISDFGLATVFRHQGRERRLSRMCGTLPYVAPELLRRPEFRAEPVDVWACGVVLTAMLAGELPWDQPSDTCQEYSDWKEHKTYLPPWKKIDSAPLALLHKILMESPSARITIPDIKKDRWFSRPLKKGVKRAQGSSGGVCDSPGGFSKPVRSDMDFSPGKSVLGEDRAGYSTSQPELGTLWDSGANTIDRLVQGISFSQPARPEHMLLSSQLLGTPGSSQSPWQRLVKRMTRFFTKLDAEGSYRALREACEKMGYGWKKSCTNQVTISTTDRRNNQLLFKVSLVEMESKILVDFRLSKGDGLEFKRHFLKIKGKLSDIISTQKVWLPAT
SIO_010081: CHEK1
subclass of: SO_0000673
so part of: CHEK1
location: join(1294039..1294103,1294634..1294857,1294955..1295019,1295500..1295569,1295677..1295865,1296355..1296459,1296966..1297061,1297315..1297423,1298164..1298332,1299330..1299461,1299571..1299672,1299904..1299999)
location: region:1294039-1299999:1
so has part: feature:1294039-1294103:1:exon
so has part: feature:1294634-1294857:1:exon
so has part: feature:1294955-1295019:1:exon
so has part: feature:1295500-1295569:1:exon
so has part: feature:1295677-1295865:1:exon
so has part: feature:1296355-1296459:1:exon
so has part: feature:1296966-1297061:1:exon
so has part: feature:1297315-1297423:1:exon
so has part: feature:1298164-1298332:1:exon
so has part: feature:1299330-1299461:1:exon
so has part: feature:1299571-1299672:1:exon
so has part: feature:1299904-1299999:1:exon

XP_030320658.1
type: Protein
SIO_000068: ncbiprotein

position:1294039:1
position: 1294039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1299999:1
position: 1299999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1294039-1294103:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1294634-1294857:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1294955-1295019:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1295500-1295569:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1295677-1295865:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1296355-1296459:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1296966-1297061:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1297315-1297423:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1298164-1298332:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1299330-1299461:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1299571-1299672:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1299904-1299999:1:exon

CDON
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: CDON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1305571..1352953
location: region:1305571-1352953:1
so has part: feature:1305571-1352953:1:exon
subclass of: SO_0000010

103532732
type: Gene
SIO_000068: ncbigene

position:1305571:1
position: 1305571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1352953:1
position: 1352953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1305571-1352953:1:exon

CDON
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CDON
product: cell adhesion associated, oncogene regulated, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030464863.1
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: join(1305571..1305716,1321663..1321799,1323846..1324118,1325206..1325352,1325595..1325750,1326144..1326434,1327315..1327584,1328421..1328750,1332019..1332266,1334422..1334596,1336024..1336152,1337285..1337491,1338166..1338347,1339141..1339246,1342750..1342872,1344297..1344524,1345763..1345992,1348817..1348896,1352088..1352344,1352554..1352953)
location: region:1305571-1352953:1
so has part: feature:1305571-1305716:1:exon
so has part: feature:1321663-1321799:1:exon
so has part: feature:1323846-1324118:1:exon
so has part: feature:1325206-1325352:1:exon
so has part: feature:1325595-1325750:1:exon
so has part: feature:1326144-1326434:1:exon
so has part: feature:1327315-1327584:1:exon
so has part: feature:1328421-1328750:1:exon
so has part: feature:1332019-1332266:1:exon
so has part: feature:1334422-1334596:1:exon
so has part: feature:1336024-1336152:1:exon
so has part: feature:1337285-1337491:1:exon
so has part: feature:1338166-1338347:1:exon
so has part: feature:1339141-1339246:1:exon
so has part: feature:1342750-1342872:1:exon
so has part: feature:1344297-1344524:1:exon
so has part: feature:1345763-1345992:1:exon
so has part: feature:1348817-1348896:1:exon
so has part: feature:1352088-1352344:1:exon
so has part: feature:1352554-1352953:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1305571-1305716:1:exon

position:1305716:1
position: 1305716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1321663-1321799:1:exon

position:1321663:1
position: 1321663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1321799:1
position: 1321799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1323846-1324118:1:exon

position:1323846:1
position: 1323846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1324118:1
position: 1324118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1325206-1325352:1:exon

position:1325206:1
position: 1325206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1325352:1
position: 1325352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1325595-1325750:1:exon

position:1325595:1
position: 1325595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1325750:1
position: 1325750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1326144-1326434:1:exon

position:1326144:1
position: 1326144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1326434:1
position: 1326434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1327315-1327584:1:exon

position:1327315:1
position: 1327315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1327584:1
position: 1327584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1328421-1328750:1:exon

position:1328421:1
position: 1328421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1328750:1
position: 1328750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1332019-1332266:1:exon

position:1332019:1
position: 1332019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1332266:1
position: 1332266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1334422-1334596:1:exon

position:1334422:1
position: 1334422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1334596:1
position: 1334596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1336024-1336152:1:exon

position:1336024:1
position: 1336024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1336152:1
position: 1336152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1337285-1337491:1:exon

position:1337285:1
position: 1337285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1337491:1
position: 1337491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1338166-1338347:1:exon

position:1338166:1
position: 1338166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1338347:1
position: 1338347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1339141-1339246:1:exon

position:1339141:1
position: 1339141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1339246:1
position: 1339246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1342750-1342872:1:exon

position:1342750:1
position: 1342750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1342872:1
position: 1342872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1344297-1344524:1:exon

position:1344297:1
position: 1344297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1344524:1
position: 1344524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1345763-1345992:1:exon

position:1345763:1
position: 1345763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1345992:1
position: 1345992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1348817-1348896:1:exon

position:1348817:1
position: 1348817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1348896:1
position: 1348896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1352088-1352344:1:exon

position:1352088:1
position: 1352088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1352344:1
position: 1352344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1352554-1352953:1:exon

position:1352554:1
position: 1352554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CDON
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CDON
product: cell adhesion associated, oncogene regulated, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030464864.1
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: join(1305571..1305716,1321663..1321799,1323846..1324118,1325206..1325352,1325595..1325738,1326144..1326434,1327315..1327584,1328421..1328750,1332019..1332266,1334422..1334596,1336024..1336152,1337285..1337491,1338166..1338347,1339141..1339246,1342750..1342872,1344297..1344524,1345763..1345992,1348817..1348896,1352088..1352344,1352554..1352953)
location: region:1305571-1352953:1
so has part: feature:1305571-1305716:1:exon
so has part: feature:1321663-1321799:1:exon
so has part: feature:1323846-1324118:1:exon
so has part: feature:1325206-1325352:1:exon
so has part: feature:1325595-1325738:1:exon
so has part: feature:1326144-1326434:1:exon
so has part: feature:1327315-1327584:1:exon
so has part: feature:1328421-1328750:1:exon
so has part: feature:1332019-1332266:1:exon
so has part: feature:1334422-1334596:1:exon
so has part: feature:1336024-1336152:1:exon
so has part: feature:1337285-1337491:1:exon
so has part: feature:1338166-1338347:1:exon
so has part: feature:1339141-1339246:1:exon
so has part: feature:1342750-1342872:1:exon
so has part: feature:1344297-1344524:1:exon
so has part: feature:1345763-1345992:1:exon
so has part: feature:1348817-1348896:1:exon
so has part: feature:1352088-1352344:1:exon
so has part: feature:1352554-1352953:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1305571-1305716:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1321663-1321799:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1323846-1324118:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1325206-1325352:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1325595-1325738:1:exon

position:1325738:1
position: 1325738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1326144-1326434:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1327315-1327584:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1328421-1328750:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1332019-1332266:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1334422-1334596:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1336024-1336152:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1337285-1337491:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1338166-1338347:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1339141-1339246:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1342750-1342872:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1344297-1344524:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1345763-1345992:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1348817-1348896:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1352088-1352344:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1352554-1352953:1:exon

CDON
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CDON
product: cell adhesion associated, oncogene regulated, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464865.1
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: join(1305571..1305716,1321663..1321799,1323846..1324118,1325206..1325352,1325595..1325750,1326144..1326434,1327315..1327584,1328421..1328750,1332019..1332266,1334422..1334596,1336024..1336152,1337285..1337491,1338166..1338347,1339141..1339246,1342750..1342872,1344297..1344524,1345763..1345992,1346126..1346225)
location: region:1305571-1346225:1
so has part: feature:1305571-1305716:1:exon
so has part: feature:1321663-1321799:1:exon
so has part: feature:1323846-1324118:1:exon
so has part: feature:1325206-1325352:1:exon
so has part: feature:1325595-1325750:1:exon
so has part: feature:1326144-1326434:1:exon
so has part: feature:1327315-1327584:1:exon
so has part: feature:1328421-1328750:1:exon
so has part: feature:1332019-1332266:1:exon
so has part: feature:1334422-1334596:1:exon
so has part: feature:1336024-1336152:1:exon
so has part: feature:1337285-1337491:1:exon
so has part: feature:1338166-1338347:1:exon
so has part: feature:1339141-1339246:1:exon
so has part: feature:1342750-1342872:1:exon
so has part: feature:1344297-1344524:1:exon
so has part: feature:1345763-1345992:1:exon
so has part: feature:1346126-1346225:1:exon

position:1346225:1
position: 1346225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1305571-1305716:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1321663-1321799:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1323846-1324118:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1325206-1325352:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1325595-1325750:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1326144-1326434:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1327315-1327584:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1328421-1328750:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1332019-1332266:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1334422-1334596:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1336024-1336152:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1337285-1337491:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1338166-1338347:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1339141-1339246:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1342750-1342872:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1344297-1344524:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1345763-1345992:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1346126-1346225:1:exon

position:1346126:1
position: 1346126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CDON
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CDON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule-related/down-regulated by oncogenes isoform X1
translation: MHPHPGHFQALLCITALTTALTTATRSDLTPHFLSEPLSTVQKPGGPVHLHCSAAPSTAGLSWLFNGEPLANKVGEVEIQSGSLTILSLSLSTSGQYQCVANSSTGAVLSSPATVSMASLGDFALAVKAAVSAEEGSSALISCKVPVSHPKAQVRFQVQGRWLEQSTDNYLILPSGNLQILNVSLEDKGSYKCAAYNPVTHDFRVEPTGQKLIVTREYSGPSSGGFHILHPLSPQSLAVPQHSPLTLECVVGGSPPPASLRWVKDGRDALRRGRWKLLHSHLVTDRLEASDSGNYSCLVGSGSGEVKYVNYSLTVLEPVSISKGLQDETTTAGATVTFWCEAQGSPAPTWTWLHNAAPLLPSPRHQLLGSRLRIRGVTPGDSGCYQCLAGNGLGFAHSTGRLHVQTGKGSRPVIVSPPVSVTVRDGGDVTFSCNATGLPLPLIRWYDSRGLLHHHPSQVLPSKPQPLPLDPTSSSLSQPGWSSLHVRNVTPERAGEYRCEAINQHGSTVSKAFLTVVPPETAELPVEVAQRDESEGDLGAETAFPSVPPARSPLGAAPPEAPIILSPPQTLKPDVYHLLWRSGRDGGSPINAYFVKYRKLEDSVSSAGGWQTVRVPGSENELRLTELEPSSLYEVLMVARSAAGEGQPAMLTFRTSKERTSSSKNTQPPSPPLGLPKHSVVHEGTNNFGVILPDLSRHSGVPEAPDRPTISTASESSVYVTWIPRANGGSPITAFKVEYKRLGRSSDWMVAADNISPSKLSVEVRSLEPGEMYRFRVIAVNTYGESPRSAASRPYQVSGFTGRFSNRPIAGPHIAYTEAISDTQIMLKWTYITSSNNNTPIQGFYIYYRPTDSDNDSDYKRDIVEGTKQWHLINHLQPETSYDIKMQCYNEGGESEYSNVMICETKVKRVPGASEYPLRDLSTLPSPPERVGGSGSSASHGPVRSSDMLYLIVGCVLGVMVLILIIFIAMCLWKNRQQNTMQKYDSPGCLYQGAEQMLDYTTLPGTSRVTGSIHSSFLGNGCPHLHHQVGNGTNGMMKGGSGLYPGTHVDCEHPHQLLNGGGLYTAVPQADPSECISCRNCHNNNRCFTKTNGTFGSTTLPAVPIVAPYQQEGLEMKPLNPHVMVAMCLASSIPECSAQLEEDGKEKIEQPSTQHSCCWEGRNHLSGDCTGGDSCVHSETSNPILSWSPLILHPLSKDCKEKPGWNSSGVILNGSGDLRQLQLQET
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: join(1321718..1321799,1323846..1324118,1325206..1325352,1325595..1325750,1326144..1326434,1327315..1327584,1328421..1328750,1332019..1332266,1334422..1334596,1336024..1336152,1337285..1337491,1338166..1338347,1339141..1339246,1342750..1342872,1344297..1344524,1345763..1345992,1348817..1348896,1352088..1352344,1352554..1352720)
location: region:1321718-1352720:1
so has part: feature:1321718-1321799:1:exon
so has part: feature:1323846-1324118:1:exon
so has part: feature:1325206-1325352:1:exon
so has part: feature:1325595-1325750:1:exon
so has part: feature:1326144-1326434:1:exon
so has part: feature:1327315-1327584:1:exon
so has part: feature:1328421-1328750:1:exon
so has part: feature:1332019-1332266:1:exon
so has part: feature:1334422-1334596:1:exon
so has part: feature:1336024-1336152:1:exon
so has part: feature:1337285-1337491:1:exon
so has part: feature:1338166-1338347:1:exon
so has part: feature:1339141-1339246:1:exon
so has part: feature:1342750-1342872:1:exon
so has part: feature:1344297-1344524:1:exon
so has part: feature:1345763-1345992:1:exon
so has part: feature:1348817-1348896:1:exon
so has part: feature:1352088-1352344:1:exon
so has part: feature:1352554-1352720:1:exon

XP_030320723.1
type: Protein
SIO_000068: ncbiprotein

position:1321718:1
position: 1321718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1352720:1
position: 1352720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1321718-1321799:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1323846-1324118:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1325206-1325352:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1325595-1325750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1326144-1326434:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1327315-1327584:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1328421-1328750:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1332019-1332266:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1334422-1334596:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1336024-1336152:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1337285-1337491:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1338166-1338347:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1339141-1339246:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1342750-1342872:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1344297-1344524:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1345763-1345992:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1348817-1348896:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1352088-1352344:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1352554-1352720:1:exon

CDON
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CDON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule-related/down-regulated by oncogenes isoform X2
translation: MHPHPGHFQALLCITALTTALTTATRSDLTPHFLSEPLSTVQKPGGPVHLHCSAAPSTAGLSWLFNGEPLANKVGEVEIQSGSLTILSLSLSTSGQYQCVANSSTGAVLSSPATVSMASLGDFALAVKAAVSAEEGSSALISCKVPVSHPKAQVRFQVQGRWLEQSTDNYLILPSGNLQILNVSLEDKGSYKCAAYNPVTHDFRVEPTGQKLIVTRPSSGGFHILHPLSPQSLAVPQHSPLTLECVVGGSPPPASLRWVKDGRDALRRGRWKLLHSHLVTDRLEASDSGNYSCLVGSGSGEVKYVNYSLTVLEPVSISKGLQDETTTAGATVTFWCEAQGSPAPTWTWLHNAAPLLPSPRHQLLGSRLRIRGVTPGDSGCYQCLAGNGLGFAHSTGRLHVQTGKGSRPVIVSPPVSVTVRDGGDVTFSCNATGLPLPLIRWYDSRGLLHHHPSQVLPSKPQPLPLDPTSSSLSQPGWSSLHVRNVTPERAGEYRCEAINQHGSTVSKAFLTVVPPETAELPVEVAQRDESEGDLGAETAFPSVPPARSPLGAAPPEAPIILSPPQTLKPDVYHLLWRSGRDGGSPINAYFVKYRKLEDSVSSAGGWQTVRVPGSENELRLTELEPSSLYEVLMVARSAAGEGQPAMLTFRTSKERTSSSKNTQPPSPPLGLPKHSVVHEGTNNFGVILPDLSRHSGVPEAPDRPTISTASESSVYVTWIPRANGGSPITAFKVEYKRLGRSSDWMVAADNISPSKLSVEVRSLEPGEMYRFRVIAVNTYGESPRSAASRPYQVSGFTGRFSNRPIAGPHIAYTEAISDTQIMLKWTYITSSNNNTPIQGFYIYYRPTDSDNDSDYKRDIVEGTKQWHLINHLQPETSYDIKMQCYNEGGESEYSNVMICETKVKRVPGASEYPLRDLSTLPSPPERVGGSGSSASHGPVRSSDMLYLIVGCVLGVMVLILIIFIAMCLWKNRQQNTMQKYDSPGCLYQGAEQMLDYTTLPGTSRVTGSIHSSFLGNGCPHLHHQVGNGTNGMMKGGSGLYPGTHVDCEHPHQLLNGGGLYTAVPQADPSECISCRNCHNNNRCFTKTNGTFGSTTLPAVPIVAPYQQEGLEMKPLNPHVMVAMCLASSIPECSAQLEEDGKEKIEQPSTQHSCCWEGRNHLSGDCTGGDSCVHSETSNPILSWSPLILHPLSKDCKEKPGWNSSGVILNGSGDLRQLQLQET
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: join(1321718..1321799,1323846..1324118,1325206..1325352,1325595..1325738,1326144..1326434,1327315..1327584,1328421..1328750,1332019..1332266,1334422..1334596,1336024..1336152,1337285..1337491,1338166..1338347,1339141..1339246,1342750..1342872,1344297..1344524,1345763..1345992,1348817..1348896,1352088..1352344,1352554..1352720)
location: region:1321718-1352720:1
so has part: feature:1321718-1321799:1:exon
so has part: feature:1323846-1324118:1:exon
so has part: feature:1325206-1325352:1:exon
so has part: feature:1325595-1325738:1:exon
so has part: feature:1326144-1326434:1:exon
so has part: feature:1327315-1327584:1:exon
so has part: feature:1328421-1328750:1:exon
so has part: feature:1332019-1332266:1:exon
so has part: feature:1334422-1334596:1:exon
so has part: feature:1336024-1336152:1:exon
so has part: feature:1337285-1337491:1:exon
so has part: feature:1338166-1338347:1:exon
so has part: feature:1339141-1339246:1:exon
so has part: feature:1342750-1342872:1:exon
so has part: feature:1344297-1344524:1:exon
so has part: feature:1345763-1345992:1:exon
so has part: feature:1348817-1348896:1:exon
so has part: feature:1352088-1352344:1:exon
so has part: feature:1352554-1352720:1:exon

XP_030320724.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1321718-1321799:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1323846-1324118:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1325206-1325352:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1325595-1325738:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1326144-1326434:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1327315-1327584:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1328421-1328750:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1332019-1332266:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1334422-1334596:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1336024-1336152:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1337285-1337491:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1338166-1338347:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1339141-1339246:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1342750-1342872:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1344297-1344524:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1345763-1345992:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1348817-1348896:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1352088-1352344:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1352554-1352720:1:exon

CDON
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CDON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule-related/down-regulated by oncogenes isoform X3
translation: MHPHPGHFQALLCITALTTALTTATRSDLTPHFLSEPLSTVQKPGGPVHLHCSAAPSTAGLSWLFNGEPLANKVGEVEIQSGSLTILSLSLSTSGQYQCVANSSTGAVLSSPATVSMASLGDFALAVKAAVSAEEGSSALISCKVPVSHPKAQVRFQVQGRWLEQSTDNYLILPSGNLQILNVSLEDKGSYKCAAYNPVTHDFRVEPTGQKLIVTREYSGPSSGGFHILHPLSPQSLAVPQHSPLTLECVVGGSPPPASLRWVKDGRDALRRGRWKLLHSHLVTDRLEASDSGNYSCLVGSGSGEVKYVNYSLTVLEPVSISKGLQDETTTAGATVTFWCEAQGSPAPTWTWLHNAAPLLPSPRHQLLGSRLRIRGVTPGDSGCYQCLAGNGLGFAHSTGRLHVQTGKGSRPVIVSPPVSVTVRDGGDVTFSCNATGLPLPLIRWYDSRGLLHHHPSQVLPSKPQPLPLDPTSSSLSQPGWSSLHVRNVTPERAGEYRCEAINQHGSTVSKAFLTVVPPETAELPVEVAQRDESEGDLGAETAFPSVPPARSPLGAAPPEAPIILSPPQTLKPDVYHLLWRSGRDGGSPINAYFVKYRKLEDSVSSAGGWQTVRVPGSENELRLTELEPSSLYEVLMVARSAAGEGQPAMLTFRTSKERTSSSKNTQPPSPPLGLPKHSVVHEGTNNFGVILPDLSRHSGVPEAPDRPTISTASESSVYVTWIPRANGGSPITAFKVEYKRLGRSSDWMVAADNISPSKLSVEVRSLEPGEMYRFRVIAVNTYGESPRSAASRPYQVSGFTGRFSNRPIAGPHIAYTEAISDTQIMLKWTYITSSNNNTPIQGFYIYYRPTDSDNDSDYKRDIVEGTKQWHLINHLQPETSYDIKMQCYNEGGESEYSNVMICETKVKRVPGASEYPLRDLSTLPSPPERVGGSGSSASHGPVRSSDMLYLIVGCVLGVMVLILIIFIAMCLWKNRQQNTMQKYDSPGCLYQGAEQMLDYTTLPGTSRVTGSIHSSFLGNGCPHLHHQVGNGTNGMMKGGSGLYPGTHVDCEHPHQLLNRKQLG
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: join(1321718..1321799,1323846..1324118,1325206..1325352,1325595..1325750,1326144..1326434,1327315..1327584,1328421..1328750,1332019..1332266,1334422..1334596,1336024..1336152,1337285..1337491,1338166..1338347,1339141..1339246,1342750..1342872,1344297..1344524,1345763..1345992,1346126..1346143)
location: region:1321718-1346143:1
so has part: feature:1321718-1321799:1:exon
so has part: feature:1323846-1324118:1:exon
so has part: feature:1325206-1325352:1:exon
so has part: feature:1325595-1325750:1:exon
so has part: feature:1326144-1326434:1:exon
so has part: feature:1327315-1327584:1:exon
so has part: feature:1328421-1328750:1:exon
so has part: feature:1332019-1332266:1:exon
so has part: feature:1334422-1334596:1:exon
so has part: feature:1336024-1336152:1:exon
so has part: feature:1337285-1337491:1:exon
so has part: feature:1338166-1338347:1:exon
so has part: feature:1339141-1339246:1:exon
so has part: feature:1342750-1342872:1:exon
so has part: feature:1344297-1344524:1:exon
so has part: feature:1345763-1345992:1:exon
so has part: feature:1346126-1346143:1:exon

XP_030320725.1
type: Protein
SIO_000068: ncbiprotein

position:1346143:1
position: 1346143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1321718-1321799:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1323846-1324118:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1325206-1325352:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1325595-1325750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1326144-1326434:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1327315-1327584:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1328421-1328750:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1332019-1332266:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1334422-1334596:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1336024-1336152:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1337285-1337491:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1338166-1338347:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1339141-1339246:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1342750-1342872:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1344297-1344524:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1345763-1345992:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1346126-1346143:1:exon

VSIG10L2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: VSIG10L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1354162..1360019)
location: region:1354162-1360019:-1
so has part: feature:1354162-1360019:-1:exon
subclass of: SO_0000010

103532731
type: Gene
SIO_000068: ncbigene

position:1354162:-1
position: 1354162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1360019:-1
position: 1360019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1354162-1360019:-1:exon

VSIG10L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: VSIG10L2
product: V-set and immunoglobulin domain containing 10 like 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 33% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030464642.1
SIO_010081: VSIG10L2
subclass of: SO_0000673
so part of: VSIG10L2
location: complement(join(1354162..1354674,1354761..1354861,1354936..1354960,1355039..1355161,1355423..1355726,1356957..1357250,1357348..1357608,1357757..1358035,1358207..1358482,1359026..1359310,1359503..1359853,1359974..1360019))
location: region:1354162-1360019:-1
so has part: feature:1359974-1360019:-1:exon
so has part: feature:1359503-1359853:-1:exon
so has part: feature:1359026-1359310:-1:exon
so has part: feature:1358207-1358482:-1:exon
so has part: feature:1357757-1358035:-1:exon
so has part: feature:1357348-1357608:-1:exon
so has part: feature:1356957-1357250:-1:exon
so has part: feature:1355423-1355726:-1:exon
so has part: feature:1355039-1355161:-1:exon
so has part: feature:1354936-1354960:-1:exon
so has part: feature:1354761-1354861:-1:exon
so has part: feature:1354162-1354674:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1359974-1360019:-1:exon

position:1359974:-1
position: 1359974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1359503-1359853:-1:exon

position:1359503:-1
position: 1359503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1359853:-1
position: 1359853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1359026-1359310:-1:exon

position:1359026:-1
position: 1359026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1359310:-1
position: 1359310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1358207-1358482:-1:exon

position:1358207:-1
position: 1358207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1358482:-1
position: 1358482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1357757-1358035:-1:exon

position:1357757:-1
position: 1357757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1358035:-1
position: 1358035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1357348-1357608:-1:exon

position:1357348:-1
position: 1357348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1357608:-1
position: 1357608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1356957-1357250:-1:exon

position:1356957:-1
position: 1356957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1357250:-1
position: 1357250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1355423-1355726:-1:exon

position:1355423:-1
position: 1355423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1355726:-1
position: 1355726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1355039-1355161:-1:exon

position:1355039:-1
position: 1355039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1355161:-1
position: 1355161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1354936-1354960:-1:exon

position:1354936:-1
position: 1354936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1354960:-1
position: 1354960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1354761-1354861:-1:exon

position:1354761:-1
position: 1354761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1354861:-1
position: 1354861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1354162-1354674:-1:exon

position:1354674:-1
position: 1354674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VSIG10L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: VSIG10L2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: V-set and immunoglobulin domain-containing protein 10-like 2
translation: MRGPWILCLLPALVGGQPLGAVSGNYEERRVTGVRGQAVELRCGPPGLTPSVVFWSFTGGPGPPRAVAVGNGAEVAVAPGAGALLGRVTLSNGSLELRELRVGAHGRFLCQGLFPEPGHLRVGYGAVLLSVLVPVSKPFVRPTASAAVEGTSVALRCTVREGTEPLSFSWQHQDPRGAPLASPPTPRGSGDHLDLSPANRSHAGWYACTVGNQVNNQTSEPIYLDIIYGPDEPTISVEPFSPEPGGFSAGEGEEVVLSCVAPSNPPSGYIWLHNSSQVHTGQTYIMASITRTQAGTYTCLAENTQLQTRTQATILLTVYYPPPGSPSCSALATNDHRAVALRCHWPGGFPPARLRWVGPGPPWEEEEDAEEGMSFSRATSIQPGVATKNGSSFSCLASHPALPQGAACGTTLWVPDGGPSCAAAATKGDDYVMLRCCWEGGTPPATLRWWDGQGKALSDPGPSTALLVLSASGSLRGEDFICVATHPLRPAGAQCRLRLEVPVLEVERSEVEVLEGGEARLACRRGGGIDLGATMAWYDPQEREVTPGMAKYRVEQGEAWLNLTVRDAEWPADTGTYRCAAANAVGTASCPVHLRVERYPPPPNVTISKLRYTRARTEVRLEWRTQGAGNLTGFVVQRRQAKGPPRRVPGPWETAAGDIEPHSRDRRLGGLDPAVVYAFRVLAVNHRRAGHPSEVQTPAEPPFEAYPAVTGAAVAGMLVATAASLLAVRWVAQHPDTLPRLHHLLFRTAGAQEPIHTPEDAEAAAGSEEGAEPAPSPVPAAEPPSAPPEPTEDPISVTTAVTAAP
SIO_010081: VSIG10L2
subclass of: SO_0000673
so part of: VSIG10L2
location: complement(join(1354601..1354674,1354761..1354861,1354936..1354960,1355039..1355161,1355423..1355726,1356957..1357250,1357348..1357608,1357757..1358035,1358207..1358482,1359026..1359310,1359503..1359853,1359974..1360019))
location: region:1354601-1360019:-1
so has part: feature:1359974-1360019:-1:exon
so has part: feature:1359503-1359853:-1:exon
so has part: feature:1359026-1359310:-1:exon
so has part: feature:1358207-1358482:-1:exon
so has part: feature:1357757-1358035:-1:exon
so has part: feature:1357348-1357608:-1:exon
so has part: feature:1356957-1357250:-1:exon
so has part: feature:1355423-1355726:-1:exon
so has part: feature:1355039-1355161:-1:exon
so has part: feature:1354936-1354960:-1:exon
so has part: feature:1354761-1354861:-1:exon
so has part: feature:1354601-1354674:-1:exon

XP_030320502.1
type: Protein
SIO_000068: ncbiprotein

position:1354601:-1
position: 1354601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1359974-1360019:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1359503-1359853:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1359026-1359310:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1358207-1358482:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1357757-1358035:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1357348-1357608:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1356957-1357250:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1355423-1355726:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1355039-1355161:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1354936-1354960:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1354761-1354861:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1354601-1354674:-1:exon

DDX25
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: DDX25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1360599..1365450)
location: region:1360599-1365450:-1
so has part: feature:1360599-1365450:-1:exon
subclass of: SO_0000010

103532729
type: Gene
SIO_000068: ncbigene

position:1360599:-1
position: 1360599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1365450:-1
position: 1365450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1360599-1365450:-1:exon

DDX25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: DDX25
product: DEAD-box helicase 25, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 23 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030464875.1
SIO_010081: DDX25
subclass of: SO_0000673
so part of: DDX25
location: complement(join(1360599..1361208,1361974..1362162,1362290..1362452,1362669..1362906,1363056..1363233,1363551..1363665,1364120..1364222,1364314..1364406,1364492..1364627,1365241..1365450))
location: region:1360599-1365450:-1
so has part: feature:1365241-1365450:-1:exon
so has part: feature:1364492-1364627:-1:exon
so has part: feature:1364314-1364406:-1:exon
so has part: feature:1364120-1364222:-1:exon
so has part: feature:1363551-1363665:-1:exon
so has part: feature:1363056-1363233:-1:exon
so has part: feature:1362669-1362906:-1:exon
so has part: feature:1362290-1362452:-1:exon
so has part: feature:1361974-1362162:-1:exon
so has part: feature:1360599-1361208:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1365241-1365450:-1:exon

position:1365241:-1
position: 1365241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1364492-1364627:-1:exon

position:1364492:-1
position: 1364492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1364627:-1
position: 1364627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1364314-1364406:-1:exon

position:1364314:-1
position: 1364314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1364406:-1
position: 1364406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1364120-1364222:-1:exon

position:1364120:-1
position: 1364120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1364222:-1
position: 1364222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1363551-1363665:-1:exon

position:1363551:-1
position: 1363551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1363665:-1
position: 1363665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1363056-1363233:-1:exon

position:1363056:-1
position: 1363056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1363233:-1
position: 1363233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1362669-1362906:-1:exon

position:1362669:-1
position: 1362669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1362906:-1
position: 1362906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1362290-1362452:-1:exon

position:1362290:-1
position: 1362290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1362452:-1
position: 1362452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1361974-1362162:-1:exon

position:1361974:-1
position: 1361974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1362162:-1
position: 1362162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1360599-1361208:-1:exon

position:1361208:-1
position: 1361208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DDX25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: DDX25
product: DEAD-box helicase 25, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030464874.1
SIO_010081: DDX25
subclass of: SO_0000673
so part of: DDX25
location: complement(join(1360599..1361779,1361974..1362162,1362290..1362452,1362669..1362906,1363056..1363233,1363551..1363665,1364120..1364222,1364314..1364406,1364492..1364627,1365241..1365441))
location: region:1360599-1365441:-1
so has part: feature:1365241-1365441:-1:exon
so has part: feature:1364492-1364627:-1:exon
so has part: feature:1364314-1364406:-1:exon
so has part: feature:1364120-1364222:-1:exon
so has part: feature:1363551-1363665:-1:exon
so has part: feature:1363056-1363233:-1:exon
so has part: feature:1362669-1362906:-1:exon
so has part: feature:1362290-1362452:-1:exon
so has part: feature:1361974-1362162:-1:exon
so has part: feature:1360599-1361779:-1:exon

position:1365441:-1
position: 1365441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1365241-1365441:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1364492-1364627:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1364314-1364406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1364120-1364222:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1363551-1363665:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1363056-1363233:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1362669-1362906:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1362290-1362452:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1361974-1362162:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1360599-1361779:-1:exon

position:1361779:-1
position: 1361779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DDX25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: DDX25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase DDX25 isoform X2
translation: MRRPSPGARFAMAAAFPRLWAPPKRPDTHPGSHRGVGKERASPQPHATGNGEGDEEEEEEEERVAAAEASLLNKLLRTALVESNHRVEILQQDPTSPLFSVKSFEELPLKKELLKGIYMMGFNRPSKIQETALPIMLAYPPQNLIAQSQSGTGKTAAFVLAMLSRVSAAEKHPQCLCLAPTYELALQIGHVVETIGRFCPDLRVTYAVRGNRVPRGTVLEEQLVIGTPGTVLDWCFKWKFLDIKKIKLFVLDEADIMIDTQGLACQSIRVQRALPQGCQMLLFSATFKETVRAFAIQIISNPIVIKLREDELTLANIRQFYFICQGREEKYRALCNIYGGITIGQAIIFCQTRRSAQWLAMMMNDDGHQVGVLTAELSVSQRADIIQRFRDGKEKVLIATNVCARGIDVQQVTIVVNFQLPTTSRNKPDFETYLHRIGRTGRFGKDGIAFSMVEKHSIPLIQMIEEHFQTTIKQLDPDDMDEIEKLQS
SIO_010081: DDX25
subclass of: SO_0000673
so part of: DDX25
location: complement(join(1361147..1361208,1361974..1362162,1362290..1362452,1362669..1362906,1363056..1363233,1363551..1363665,1364120..1364222,1364314..1364406,1364492..1364627,1365241..1365430))
location: region:1361147-1365430:-1
so has part: feature:1365241-1365430:-1:exon
so has part: feature:1364492-1364627:-1:exon
so has part: feature:1364314-1364406:-1:exon
so has part: feature:1364120-1364222:-1:exon
so has part: feature:1363551-1363665:-1:exon
so has part: feature:1363056-1363233:-1:exon
so has part: feature:1362669-1362906:-1:exon
so has part: feature:1362290-1362452:-1:exon
so has part: feature:1361974-1362162:-1:exon
so has part: feature:1361147-1361208:-1:exon

XP_030320735.1
type: Protein
SIO_000068: ncbiprotein

position:1361147:-1
position: 1361147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1365430:-1
position: 1365430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1365241-1365430:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1364492-1364627:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1364314-1364406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1364120-1364222:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1363551-1363665:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1363056-1363233:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1362669-1362906:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1362290-1362452:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1361974-1362162:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1361147-1361208:-1:exon

DDX25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: DDX25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase DDX25 isoform X1
translation: MRRPSPGARFAMAAAFPRLWAPPKRPDTHPGSHRGVGKERASPQPHATGNGEGDEEEEEEEERVAAAEASLLNKLLRTALVESNHRVEILQQDPTSPLFSVKSFEELPLKKELLKGIYMMGFNRPSKIQETALPIMLAYPPQNLIAQSQSGTGKTAAFVLAMLSRVSAAEKHPQCLCLAPTYELALQIGHVVETIGRFCPDLRVTYAVRGNRVPRGTVLEEQLVIGTPGTVLDWCFKWKFLDIKKIKLFVLDEADIMIDTQGLACQSIRVQRALPQGCQMLLFSATFKETVRAFAIQIISNPIVIKLREDELTLANIRQFYFICQGREEKYRALCNIYGGITIGQAIIFCQTRRSAQWLAMMMNDDGHQVGVLTAELSVSQRADIIQRFRDGKEKVLIATNVCARGIDVQQVTIVVNFQLPTTSRNKPDFETYLHRIGRTGRFGKDGIAFSMVEKHSIPLIQMIEEHFRIFSAFTLPSPEPVAHPWLWESRSHQGPFRAQTHHHSSTSRGFSEEDTWGFFPNPSEFLKEKKVLESFLHGRKPLPCLILILGVAESSWPSLNFSFILYI
SIO_010081: DDX25
subclass of: SO_0000673
so part of: DDX25
location: complement(join(1361478..1361779,1361974..1362162,1362290..1362452,1362669..1362906,1363056..1363233,1363551..1363665,1364120..1364222,1364314..1364406,1364492..1364627,1365241..1365430))
location: region:1361478-1365430:-1
so has part: feature:1365241-1365430:-1:exon
so has part: feature:1364492-1364627:-1:exon
so has part: feature:1364314-1364406:-1:exon
so has part: feature:1364120-1364222:-1:exon
so has part: feature:1363551-1363665:-1:exon
so has part: feature:1363056-1363233:-1:exon
so has part: feature:1362669-1362906:-1:exon
so has part: feature:1362290-1362452:-1:exon
so has part: feature:1361974-1362162:-1:exon
so has part: feature:1361478-1361779:-1:exon

XP_030320734.1
type: Protein
SIO_000068: ncbiprotein

position:1361478:-1
position: 1361478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1365241-1365430:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1364492-1364627:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1364314-1364406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1364120-1364222:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1363551-1363665:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1363056-1363233:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1362669-1362906:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1362290-1362452:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1361974-1362162:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1361478-1361779:-1:exon

PUS3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PUS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1365643..1370519
location: region:1365643-1370519:1
so has part: feature:1365643-1370519:1:exon
subclass of: SO_0000010

103532727
type: Gene
SIO_000068: ncbigene

position:1365643:1
position: 1365643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1370519:1
position: 1370519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1365643-1370519:1:exon

PUS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PUS3
product: pseudouridine synthase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030464916.1
SIO_010081: PUS3
subclass of: SO_0000673
so part of: PUS3
location: join(1365643..1365674,1367803..1368194,1369031..1369563,1369824..1370014,1370114..1370519)
location: region:1365643-1370519:1
so has part: feature:1365643-1365674:1:exon
so has part: feature:1367803-1368194:1:exon
so has part: feature:1369031-1369563:1:exon
so has part: feature:1369824-1370014:1:exon
so has part: feature:1370114-1370519:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1365643-1365674:1:exon

position:1365674:1
position: 1365674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1367803-1368194:1:exon

position:1367803:1
position: 1367803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1368194:1
position: 1368194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1369031-1369563:1:exon

position:1369031:1
position: 1369031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1369563:1
position: 1369563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1369824-1370014:1:exon

position:1369824:1
position: 1369824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1370014:1
position: 1370014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1370114-1370519:1:exon

position:1370114:1
position: 1370114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HYLS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: HYLS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1366423..1371049)
location: region:1366423-1371049:-1
so has part: feature:1366423-1371049:-1:exon
subclass of: SO_0000010

103532728
type: Gene
SIO_000068: ncbigene

position:1366423:-1
position: 1366423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1371049:-1
position: 1371049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1366423-1371049:-1:exon

HYLS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: HYLS1
product: HYLS1 centriolar and ciliogenesis associated
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464917.1
SIO_010081: HYLS1
subclass of: SO_0000673
so part of: HYLS1
location: complement(join(1366423..1367273,1370993..1371049))
location: region:1366423-1371049:-1
so has part: feature:1370993-1371049:-1:exon
so has part: feature:1366423-1367273:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1370993-1371049:-1:exon

position:1370993:-1
position: 1370993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1366423-1367273:-1:exon

position:1367273:-1
position: 1367273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HYLS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: HYLS1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: hydrolethalus syndrome protein 1
translation: MMEENRGLEEYPWDDELLAMLTHSKQPPPHHHPCDQVSVPSEAPPAPPQATNRQLVMKRKVLRHRADGGTEVWDEPAGGEVTSSPQIHPDDDDDISEGEMGSSSSSLEDSLCHQWPQDSPISLPEDFEEPSFLSSQDITVEQPKSFIPPRLELLNRAKTDPVNKYFEYKRDWEKFCIPGEVPRQELRWSVREQMLCPPPAPPRPQPTLHPNTYTIPTQKKRAALRWGVRWDLAHGLLPRKNT
SIO_010081: HYLS1
subclass of: SO_0000673
so part of: HYLS1
location: complement(1366523..1367252)
location: region:1366523-1367252:-1
so has part: feature:1366523-1367252:-1:exon

XP_030320777.1
type: Protein
SIO_000068: ncbiprotein

position:1366523:-1
position: 1366523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1367252:-1
position: 1367252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1366523-1367252:-1:exon

PUS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PUS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA pseudouridine(38/39) synthase
translation: MAEGSVVTDPEQLLRKVRELEEEVKRLQEKLGQDEKGAEGKEAPAAASKGRKRQRRPFDFGAHGQRHVALRVAYLGWNYQGFASQENTSNTIEEKLFEALKKTRLVEERQSSNYHRCGRTDKGVSAFGQVISLDLRSNLSEGKQLKGQEELRYTHMLNRVLPPDIRVLAWAPVEPHFSARFSCLRRTYRYFFPCADLDVALMQAAAQRYVGTHDFRNLCKMDVANGVVNFQRTILRAEVTWVEGGGGTELQDPFRLCQFEVTGQAFLYHQVRCMMAILFLIGQRMESPEIIDQLLDVEKNPRKPQYSMAVEFPLVLYDCEFENLQWFYDPEVQEFNITHLQQLWANQAVKTQVLRNMLQGLDAAPVAAGKRPGNTTTVPWGDMKPPLHSQVSGFVEGVKARTYKPLLARPKCEGLEQRIRHFVRRGRIETPPGLELGGNKEEKKEEEEDEPPMDSKRSQGSHGPAGDTEQPSKRVCKDKE
SIO_010081: PUS3
subclass of: SO_0000673
so part of: PUS3
location: join(1367808..1368194,1369031..1369563,1369824..1370014,1370114..1370445)
location: region:1367808-1370445:1
so has part: feature:1367808-1368194:1:exon
so has part: feature:1369031-1369563:1:exon
so has part: feature:1369824-1370014:1:exon
so has part: feature:1370114-1370445:1:exon

XP_030320776.1
type: Protein
SIO_000068: ncbiprotein

position:1367808:1
position: 1367808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1370445:1
position: 1370445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1367808-1368194:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1369031-1369563:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1369824-1370014:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1370114-1370445:1:exon

RPUSD4
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: RPUSD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1371194..1373549
location: region:1371194-1373549:1
so has part: feature:1371194-1373549:1:exon
subclass of: SO_0000010

103532726
type: Gene
SIO_000068: ncbigene

position:1371194:1
position: 1371194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1373549:1
position: 1373549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1371194-1373549:1:exon

RPUSD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RPUSD4
product: RNA pseudouridine synthase D4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030464643.1
SIO_010081: RPUSD4
subclass of: SO_0000673
so part of: RPUSD4
location: join(1371194..1371352,1371713..1371878,1372055..1372256,1372427..1372520,1372602..1372752,1372930..1373027,1373142..1373549)
location: region:1371194-1373549:1
so has part: feature:1371194-1371352:1:exon
so has part: feature:1371713-1371878:1:exon
so has part: feature:1372055-1372256:1:exon
so has part: feature:1372427-1372520:1:exon
so has part: feature:1372602-1372752:1:exon
so has part: feature:1372930-1373027:1:exon
so has part: feature:1373142-1373549:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1371194-1371352:1:exon

position:1371352:1
position: 1371352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1371713-1371878:1:exon

position:1371713:1
position: 1371713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1371878:1
position: 1371878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1372055-1372256:1:exon

position:1372055:1
position: 1372055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1372256:1
position: 1372256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1372427-1372520:1:exon

position:1372427:1
position: 1372427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1372520:1
position: 1372520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1372602-1372752:1:exon

position:1372602:1
position: 1372602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1372752:1
position: 1372752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1372930-1373027:1:exon

position:1372930:1
position: 1372930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1373027:1
position: 1373027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1373142-1373549:1:exon

position:1373142:1
position: 1373142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPUSD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RPUSD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial RNA pseudouridine synthase RPUSD4
translation: MAAASGGGLWLGAAVGLCRAVRSVCGRAAEPELRAEQLAERLRERRSEGEKQEVPKDPAQRRVQEFAKLSKKLQQVHPNVLAKVLKQETIYQNEEIVVINKPYGIPVHGGPRIKNCISDVLPVLAKMLENMRAEPLHLCHRLDKETTGLMVLARNKEVADKIRLLFKTRQVEKFYWAISLGDPEPSEGTVEIPIVEREVQSHQPHYKMTLAPNYRLSPEEGKVLRTRRNRHAETAVTRYRLLARSAACSLLELQPITGVKHQLRVHLAYGLGCPILGDHKYSHWSKLAPQKLPEITLKRLKLEQSKARHLPLHLHAHRLSLPLGQGINLVCKPPLFFQKTLKKLELEVPDD
SIO_010081: RPUSD4
subclass of: SO_0000673
so part of: RPUSD4
location: join(1371194..1371352,1371713..1371878,1372055..1372256,1372427..1372520,1372602..1372752,1372930..1373027,1373142..1373327)
location: region:1371194-1373327:1
so has part: feature:1371194-1371352:1:exon
so has part: feature:1371713-1371878:1:exon
so has part: feature:1372055-1372256:1:exon
so has part: feature:1372427-1372520:1:exon
so has part: feature:1372602-1372752:1:exon
so has part: feature:1372930-1373027:1:exon
so has part: feature:1373142-1373327:1:exon

XP_030320503.1
type: Protein
SIO_000068: ncbiprotein

position:1373327:1
position: 1373327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1371194-1371352:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1371713-1371878:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1372055-1372256:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1372427-1372520:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1372602-1372752:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1372930-1373027:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1373142-1373327:1:exon

PANX3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PANX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1374389..1376633
location: region:1374389-1376633:1
so has part: feature:1374389-1376633:1:exon
subclass of: SO_0000010

103532725
type: Gene
SIO_000068: ncbigene

position:1374389:1
position: 1374389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1376633:1
position: 1376633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1374389-1376633:1:exon

PANX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PANX3
product: pannexin 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030464644.1
SIO_010081: PANX3
subclass of: SO_0000673
so part of: PANX3
location: join(1374389..1374569,1375084..1375226,1375309..1375523,1375614..1376251,1376545..1376633)
location: region:1374389-1376633:1
so has part: feature:1374389-1374569:1:exon
so has part: feature:1375084-1375226:1:exon
so has part: feature:1375309-1375523:1:exon
so has part: feature:1375614-1376251:1:exon
so has part: feature:1376545-1376633:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1374389-1374569:1:exon

position:1374569:1
position: 1374569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1375084-1375226:1:exon

position:1375084:1
position: 1375084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1375226:1
position: 1375226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1375309-1375523:1:exon

position:1375309:1
position: 1375309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1375523:1
position: 1375523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1375614-1376251:1:exon

position:1375614:1
position: 1375614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1376251:1
position: 1376251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1376545-1376633:1:exon

position:1376545:1
position: 1376545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PANX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PANX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pannexin-3
translation: MSLSHTAAEFMLSDALLPDPGGSHSRALRLELPSDRLLKFVTVGLPLLLVSLAFAREFSTGSQISCFPPTNFTGKQSAYVDTACWDSLLHHGLDTEGHMVTKSLWALRVFPYSLLVVGVLMYLPYLLWRYAAAPSLRSDLLFVMDELDKSYNRSVRLVQHMRKVQQDSAEPERFWEEYERARQERYFEFPLLERYLICKQHTHSLTFIFMLRNLLLLVLLAATCLYLIFLHLNIAFQDEFSCSIKTGLLQVEPHIPLLIPCKLAFFFIFQLLSLTVGSVYVLLLPVVIYNALQLCQWDKGLLSVYEMLPAFDLLSRKMLTCPLNDLNLLLLFLRANISQVTSFSRLNAVSALKEATPNQGDIDTVVDFMTLLAGLETTKPKHHPEANGAGAPVPPFPSLALGPKPGAEAMGKASHDSLGSA
SIO_010081: PANX3
subclass of: SO_0000673
so part of: PANX3
location: join(1374389..1374569,1375084..1375226,1375309..1375523,1375614..1376251,1376545..1376633)
location: region:1374389-1376633:1
so has part: feature:1374389-1374569:1:exon
so has part: feature:1375084-1375226:1:exon
so has part: feature:1375309-1375523:1:exon
so has part: feature:1375614-1376251:1:exon
so has part: feature:1376545-1376633:1:exon

XP_030320504.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1374389-1374569:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1375084-1375226:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1375309-1375523:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1375614-1376251:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1376545-1376633:1:exon

SIAE
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SIAE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1376865..1381797)
location: region:1376865-1381797:-1
so has part: feature:1376865-1381797:-1:exon
subclass of: SO_0000010

103532724
type: Gene
SIO_000068: ncbigene

position:1376865:-1
position: 1376865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1381797:-1
position: 1381797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1376865-1381797:-1:exon

SIAE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SIAE
product: sialic acid acetylesterase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030464736.1
SIO_010081: SIAE
subclass of: SO_0000673
so part of: SIAE
location: complement(join(1376865..1377512,1377606..1377801,1377924..1378078,1378190..1378323,1378405..1378496,1378680..1378863,1378968..1379106,1379185..1379348,1381704..1381797))
location: region:1376865-1381797:-1
so has part: feature:1381704-1381797:-1:exon
so has part: feature:1379185-1379348:-1:exon
so has part: feature:1378968-1379106:-1:exon
so has part: feature:1378680-1378863:-1:exon
so has part: feature:1378405-1378496:-1:exon
so has part: feature:1378190-1378323:-1:exon
so has part: feature:1377924-1378078:-1:exon
so has part: feature:1377606-1377801:-1:exon
so has part: feature:1376865-1377512:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1381704-1381797:-1:exon

position:1381704:-1
position: 1381704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1379185-1379348:-1:exon

position:1379185:-1
position: 1379185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1379348:-1
position: 1379348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1378968-1379106:-1:exon

position:1378968:-1
position: 1378968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1379106:-1
position: 1379106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1378680-1378863:-1:exon

position:1378680:-1
position: 1378680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1378863:-1
position: 1378863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1378405-1378496:-1:exon

position:1378405:-1
position: 1378405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1378496:-1
position: 1378496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1378190-1378323:-1:exon

position:1378190:-1
position: 1378190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1378323:-1
position: 1378323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1377924-1378078:-1:exon

position:1377924:-1
position: 1377924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1378078:-1
position: 1378078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1377606-1377801:-1:exon

position:1377606:-1
position: 1377606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1377801:-1
position: 1377801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1376865-1377512:-1:exon

position:1377512:-1
position: 1377512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SIAE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SIAE
product: sialic acid acetylesterase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030464734.1
SIO_010081: SIAE
subclass of: SO_0000673
so part of: SIAE
location: complement(join(1376865..1377512,1377606..1377801,1377924..1378078,1378190..1378323,1378405..1378496,1378680..1378863,1378968..1379106,1379185..1379348,1380128..1380292,1381704..1381797))
location: region:1376865-1381797:-1
so has part: feature:1381704-1381797:-1:exon
so has part: feature:1380128-1380292:-1:exon
so has part: feature:1379185-1379348:-1:exon
so has part: feature:1378968-1379106:-1:exon
so has part: feature:1378680-1378863:-1:exon
so has part: feature:1378405-1378496:-1:exon
so has part: feature:1378190-1378323:-1:exon
so has part: feature:1377924-1378078:-1:exon
so has part: feature:1377606-1377801:-1:exon
so has part: feature:1376865-1377512:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1381704-1381797:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1380128-1380292:-1:exon

position:1380128:-1
position: 1380128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1380292:-1
position: 1380292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1379185-1379348:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1378968-1379106:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1378680-1378863:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1378405-1378496:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1378190-1378323:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1377924-1378078:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1377606-1377801:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1376865-1377512:-1:exon

SIAE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SIAE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sialate O-acetylesterase isoform X2
translation: MAAWALLLALLAPAGPSGTWTTLLDPMEPGGPYELTARQGTENVTLQDVYFGDVWLCSGQSNMAMTVLQITNASQELAAASQYPYVRLFAVAPTRSDHELEDLEGIDLPWSIPTPEILGHGNFTYFSAICWLLGQRLYETLGYPVGLVEAAWGGTPIEAWSSPRALRACGLLEEMGSPSGPHAPSVLWNAMIHPLLNLTLQGVAWYQGEENTLLNTDLYNCTFPALIADWRRAFHAGSAGQTHPLLPFGFVQLSTYRRQSPQDTFPRLRWHQTADLGVVPNTRMPNTFMAVAMDLGDERSPYGSIHPRDKQNVAHRLHLGARAVAYGEKNLVFQGPYPTRALLEVTRALLNITYTQELVWRSRDMPAFEVCCSRQASPCEWVLAPVVTVQSHQVTLSVAGCGRLVLGLRYAWAEWPCDYQACVLYNPGGLPAPPFLLHTSGDRELLLQPSFGI
SIO_010081: SIAE
subclass of: SO_0000673
so part of: SIAE
location: complement(join(1377258..1377512,1377606..1377801,1377924..1378078,1378190..1378323,1378405..1378496,1378680..1378863,1378968..1379106,1379185..1379348,1381704..1381746))
location: region:1377258-1381746:-1
so has part: feature:1381704-1381746:-1:exon
so has part: feature:1379185-1379348:-1:exon
so has part: feature:1378968-1379106:-1:exon
so has part: feature:1378680-1378863:-1:exon
so has part: feature:1378405-1378496:-1:exon
so has part: feature:1378190-1378323:-1:exon
so has part: feature:1377924-1378078:-1:exon
so has part: feature:1377606-1377801:-1:exon
so has part: feature:1377258-1377512:-1:exon

XP_030320596.1
type: Protein
SIO_000068: ncbiprotein

position:1377258:-1
position: 1377258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1381746:-1
position: 1381746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1381704-1381746:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1379185-1379348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1378968-1379106:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1378680-1378863:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1378405-1378496:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1378190-1378323:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1377924-1378078:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1377606-1377801:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1377258-1377512:-1:exon

SIAE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SIAE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sialate O-acetylesterase isoform X1
translation: MAAWALLLALLAPAGAMLGFASYYGHHMVLQKEPVGALVWGYGELGTTVTVALSGDGGLVVMKKTAEVKGPSGTWTTLLDPMEPGGPYELTARQGTENVTLQDVYFGDVWLCSGQSNMAMTVLQITNASQELAAASQYPYVRLFAVAPTRSDHELEDLEGIDLPWSIPTPEILGHGNFTYFSAICWLLGQRLYETLGYPVGLVEAAWGGTPIEAWSSPRALRACGLLEEMGSPSGPHAPSVLWNAMIHPLLNLTLQGVAWYQGEENTLLNTDLYNCTFPALIADWRRAFHAGSAGQTHPLLPFGFVQLSTYRRQSPQDTFPRLRWHQTADLGVVPNTRMPNTFMAVAMDLGDERSPYGSIHPRDKQNVAHRLHLGARAVAYGEKNLVFQGPYPTRALLEVTRALLNITYTQELVWRSRDMPAFEVCCSRQASPCEWVLAPVVTVQSHQVTLSVAGCGRLVLGLRYAWAEWPCDYQACVLYNPGGLPAPPFLLHTSGDRELLLQPSFGI
SIO_010081: SIAE
subclass of: SO_0000673
so part of: SIAE
location: complement(join(1377258..1377512,1377606..1377801,1377924..1378078,1378190..1378323,1378405..1378496,1378680..1378863,1378968..1379106,1379185..1379348,1380128..1380292,1381704..1381746))
location: region:1377258-1381746:-1
so has part: feature:1381704-1381746:-1:exon
so has part: feature:1380128-1380292:-1:exon
so has part: feature:1379185-1379348:-1:exon
so has part: feature:1378968-1379106:-1:exon
so has part: feature:1378680-1378863:-1:exon
so has part: feature:1378405-1378496:-1:exon
so has part: feature:1378190-1378323:-1:exon
so has part: feature:1377924-1378078:-1:exon
so has part: feature:1377606-1377801:-1:exon
so has part: feature:1377258-1377512:-1:exon

XP_030320594.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1381704-1381746:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1380128-1380292:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1379185-1379348:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1378968-1379106:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1378680-1378863:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1378405-1378496:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1378190-1378323:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1377924-1378078:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1377606-1377801:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1377258-1377512:-1:exon

SPA17
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SPA17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1382129..1383608
location: region:1382129-1383608:1
so has part: feature:1382129-1383608:1:exon
subclass of: SO_0000010

103532723
type: Gene
SIO_000068: ncbigene

position:1382129:1
position: 1382129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1383608:1
position: 1383608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1382129-1383608:1:exon

SPA17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SPA17
product: sperm autoantigenic protein 17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464873.1
SIO_010081: SPA17
subclass of: SO_0000673
so part of: SPA17
location: join(1382129..1382406,1382713..1382816,1383426..1383608)
location: region:1382129-1383608:1
so has part: feature:1382129-1382406:1:exon
so has part: feature:1382713-1382816:1:exon
so has part: feature:1383426-1383608:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1382129-1382406:1:exon

position:1382406:1
position: 1382406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1382713-1382816:1:exon

position:1382713:1
position: 1382713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1382816:1
position: 1382816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1383426-1383608:1:exon

position:1383426:1
position: 1383426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPA17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SPA17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sperm surface protein Sp17
translation: MNPECAAAGGPEEHNMATSFCSSSLRLPEGFQDLLEGLALEVLRAQPSDVVAFAAQHYQALLERREGEKQEKEKADKERDELKEAAEQDKESGDSTTSLGAGKQEGWMEEKKNDANQDPTSPACTAPLSASNVPFYFYFYFFF
SIO_010081: SPA17
subclass of: SO_0000673
so part of: SPA17
location: join(1382208..1382406,1382713..1382816,1383426..1383554)
location: region:1382208-1383554:1
so has part: feature:1382208-1382406:1:exon
so has part: feature:1382713-1382816:1:exon
so has part: feature:1383426-1383554:1:exon

XP_030320733.1
type: Protein
SIO_000068: ncbiprotein

position:1382208:1
position: 1382208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1383554:1
position: 1383554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1382208-1382406:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1382713-1382816:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1383426-1383554:1:exon

NRGN
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: NRGN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1385665..1391600
location: region:1385665-1391600:1
so has part: feature:1385665-1391600:1:exon
subclass of: SO_0000010

115599626
type: Gene
SIO_000068: ncbigene

position:1385665:1
position: 1385665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1391600:1
position: 1391600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1385665-1391600:1:exon

NRGN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NRGN
product: neurogranin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 9 long SRA reads, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030464882.1
SIO_010081: NRGN
subclass of: SO_0000673
so part of: NRGN
location: join(1385665..1385831,1388874..1389080,1391456..1391600)
location: region:1385665-1391600:1
so has part: feature:1385665-1385831:1:exon
so has part: feature:1388874-1389080:1:exon
so has part: feature:1391456-1391600:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1385665-1385831:1:exon

position:1385831:1
position: 1385831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1388874-1389080:1:exon

position:1388874:1
position: 1388874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1389080:1
position: 1389080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1391456-1391600:1:exon

position:1391456:1
position: 1391456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NRGN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NRGN
product: neurogranin, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464884.1
SIO_010081: NRGN
subclass of: SO_0000673
so part of: NRGN
location: join(1385726..1385831,1388874..1389080,1389817..1389823)
location: region:1385726-1389823:1
so has part: feature:1385726-1385831:1:exon
so has part: feature:1388874-1389080:1:exon
so has part: feature:1389817-1389823:1:exon

position:1385726:1
position: 1385726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1389823:1
position: 1389823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1385726-1385831:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1388874-1389080:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1389817-1389823:1:exon

position:1389817:1
position: 1389817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NRGN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NRGN
product: neurogranin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464883.1
SIO_010081: NRGN
subclass of: SO_0000673
so part of: NRGN
location: join(1385726..1385831,1388874..1389080,1389760..1389812)
location: region:1385726-1389812:1
so has part: feature:1385726-1385831:1:exon
so has part: feature:1388874-1389080:1:exon
so has part: feature:1389760-1389812:1:exon

position:1389812:1
position: 1389812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1385726-1385831:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1388874-1389080:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1389760-1389812:1:exon

position:1389760:1
position: 1389760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NRGN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NRGN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurogranin
translation: MDCCNEGACTKLDEDILDIPLDDPDANAAAAKIQASFRGHMTRKKIKGGEMERKTKEAECANSPRGGDLRNGD
SIO_010081: NRGN
subclass of: SO_0000673
so part of: NRGN
location: join(1385817..1385831,1388874..1389080)
location: region:1385817-1389080:1
so has part: feature:1385817-1385831:1:exon
so has part: feature:1388874-1389080:1:exon

XP_030320742.1
type: Protein
SIO_000068: ncbiprotein

position:1385817:1
position: 1385817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1385817-1385831:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1388874-1389080:1:exon

NRGN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NRGN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurogranin
translation: MDCCNEGACTKLDEDILDIPLDDPDANAAAAKIQASFRGHMTRKKIKGGEMERKTKEAECANSPRGGDLRNGD
SIO_010081: NRGN
subclass of: SO_0000673
so part of: NRGN
location: join(1385817..1385831,1388874..1389080)
location: region:1385817-1389080:1
so has part: feature:1385817-1385831:1:exon
so has part: feature:1388874-1389080:1:exon

XP_030320743.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1385817-1385831:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1388874-1389080:1:exon

NRGN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NRGN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurogranin
translation: MDCCNEGACTKLDEDILDIPLDDPDANAAAAKIQASFRGHMTRKKIKGGEMERKTKEAECANSPRGGDLRNGD
SIO_010081: NRGN
subclass of: SO_0000673
so part of: NRGN
location: join(1385817..1385831,1388874..1389080)
location: region:1385817-1389080:1
so has part: feature:1385817-1385831:1:exon
so has part: feature:1388874-1389080:1:exon

XP_030320744.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1385817-1385831:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1388874-1389080:1:exon

ESAM
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ESAM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1392772..1394739)
location: region:1392772-1394739:-1
so has part: feature:1392772-1394739:-1:exon
subclass of: SO_0000010

103532722
type: Gene
SIO_000068: ncbigene

position:1392772:-1
position: 1392772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1394739:-1
position: 1394739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1392772-1394739:-1:exon

ESAM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ESAM
product: endothelial cell adhesion molecule
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 70% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030464645.1
SIO_010081: ESAM
subclass of: SO_0000673
so part of: ESAM
location: complement(join(1392772..1393077,1393296..1393439,1393539..1393666,1393744..1393898,1393983..1394166,1394600..1394739))
location: region:1392772-1394739:-1
so has part: feature:1394600-1394739:-1:exon
so has part: feature:1393983-1394166:-1:exon
so has part: feature:1393744-1393898:-1:exon
so has part: feature:1393539-1393666:-1:exon
so has part: feature:1393296-1393439:-1:exon
so has part: feature:1392772-1393077:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1394600-1394739:-1:exon

position:1394600:-1
position: 1394600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1393983-1394166:-1:exon

position:1393983:-1
position: 1393983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1394166:-1
position: 1394166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1393744-1393898:-1:exon

position:1393744:-1
position: 1393744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1393898:-1
position: 1393898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1393539-1393666:-1:exon

position:1393539:-1
position: 1393539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1393666:-1
position: 1393666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1393296-1393439:-1:exon

position:1393296:-1
position: 1393296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1393439:-1
position: 1393439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1392772-1393077:-1:exon

position:1393077:-1
position: 1393077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ESAM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ESAM
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: endothelial cell-selective adhesion molecule
translation: MMEVMISWYPTMGRVRDGEVSMTGCSPGGGAHHGVVEVVGKCSRCPWWRETELKPRLGFLYPVPSHNISLFINAXQERDSGQYLCTVNVVDDVTSTGKNVGVINLTVLVPPAPPXCRLQGHPTVGANITLSCTSEKGKPSPTYQWHRTAPTTQIFFPPAQDQAKGILKLTNLSMDMAGLYVCMAENRAGSAECSVLLEVHSSDSQRQSPSSPGAVLGSLGAIATVVFFTRRVVGYRQKKRDSQEEVANEIKEDAIAPKTPSWARSPPADAVSKTSTLSSLASSARGRPYGAHPLPDTHRGTPQRLGGRPGHPQTLNGTPPRRHPNPPSLARAGAIPVMVPAQSRAGSLV
SIO_010081: ESAM
subclass of: SO_0000673
so part of: ESAM
location: complement(join(1392780..1393077,1393296..1393439,1393539..1393666,1393744..1393898,1393983..1394166,1394600..1394739))
location: region:1392780-1394739:-1
so has part: feature:1394600-1394739:-1:exon
so has part: feature:1393983-1394166:-1:exon
so has part: feature:1393744-1393898:-1:exon
so has part: feature:1393539-1393666:-1:exon
so has part: feature:1393296-1393439:-1:exon
so has part: feature:1392780-1393077:-1:exon

XP_030320505.1
type: Protein
SIO_000068: ncbiprotein

position:1392780:-1
position: 1392780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1394600-1394739:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1393983-1394166:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1393744-1393898:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1393539-1393666:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1393296-1393439:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1392780-1393077:-1:exon

MSANTD2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: MSANTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1403168..1414226)
location: region:1403168-1414226:-1
so has part: feature:1403168-1414226:-1:exon
subclass of: SO_0000010

103532721
type: Gene
SIO_000068: ncbigene

position:1403168:-1
position: 1403168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1414226:-1
position: 1414226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1403168-1414226:-1:exon

MSANTD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 17 bases in 15 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 51% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030464925.1
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: complement(join(1403168..1404702,1407986..1408047,1408911..1409166,1409621..1409662,1413725..1414226))
location: region:1403168-1414226:-1
so has part: feature:1413725-1414226:-1:exon
so has part: feature:1409621-1409662:-1:exon
so has part: feature:1408911-1409166:-1:exon
so has part: feature:1407986-1408047:-1:exon
so has part: feature:1403168-1404702:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1413725-1414226:-1:exon

position:1413725:-1
position: 1413725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1409621-1409662:-1:exon

position:1409621:-1
position: 1409621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1409662:-1
position: 1409662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1408911-1409166:-1:exon

position:1408911:-1
position: 1408911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1409166:-1
position: 1409166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1407986-1408047:-1:exon

position:1407986:-1
position: 1407986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1408047:-1
position: 1408047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1403168-1404702:-1:exon

position:1404702:-1
position: 1404702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MSANTD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MSANTD2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 17 bases in 15 codons; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(1408018..1408020),aa:OTHER)
transl except: (pos:complement(1404427..1404429),aa:OTHER)
product: LOW QUALITY PROTEIN: myb/SANT-like DNA-binding domain-containing protein 2
translation: MAAPCGSSPLPPAEPPLKIPKMEVLSPGSPAALSDGNPSLSDPSTPSGASPLGPGPAAGGAGLGGRGGASPSVSFSPGGAAAAAAAAACRGMSWTPAETNALIAVWGNERLVEARYQQLEGAGTVFGSKAPGPAMYERVSRALAELGYERTPSQCRERIKQLQRSQSELVRKAERTLRRCYSRVKEHGVXKESSYTFEQLEQVFGQXGWDSQPCQPVLINSSGLYQELESDGSTMEEYSQEDWGNHSQELHCYQTGEQELDEMPTTKGHXRSNQESSEDTQKRDVMQNIMQILESVQLKWELFQSWTDFSRLHLSNKLAIFGIGYNTRWKEDIRYHYAEISSQVPLGKRLREYFNSEKPQGRVIMTRVQKXNWKNVYYKFLEITISEARCLELHMEIDWIPIAHSKPTGGNVVQYLLPGGIPKSPGLYAIGYEECHEKPPSPLAEPQGRPDPGNETPGELEVPSPQSPSGVDMESARIIYCYLGIAEVRTLQQCLFLHFQANTKTFSKDWVGINAFLSQNWLVEPGVSPKSIYIKFVEVERDFLSAGSLVECLEKAIGYPLKFNN
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: complement(join(1403830..1404702,1407986..1408047,1408911..1409166,1409621..1409662,1413725..1414204))
location: region:1403830-1414204:-1
so has part: feature:1413725-1414204:-1:exon
so has part: feature:1409621-1409662:-1:exon
so has part: feature:1408911-1409166:-1:exon
so has part: feature:1407986-1408047:-1:exon
so has part: feature:1403830-1404702:-1:exon

XP_030320785.1
type: Protein
SIO_000068: ncbiprotein

position:1403830:-1
position: 1403830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1414204:-1
position: 1414204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1413725-1414204:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1409621-1409662:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1408911-1409166:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1407986-1408047:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1403830-1404702:-1:exon

ROBO3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ROBO3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1420101..1432198
location: region:1420101-1432198:1
so has part: feature:1420101-1432198:1:exon
subclass of: SO_0000010

103532720
type: Gene
SIO_000068: ncbigene

position:1420101:1
position: 1420101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1432198:1
position: 1432198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1420101-1432198:1:exon

ROBO3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ROBO3
product: roundabout guidance receptor 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 15% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030464646.1
SIO_010081: ROBO3
subclass of: SO_0000673
so part of: ROBO3
location: join(1420101..1420254,1422517..1422843,1423237..1423397,1423495..1423615,1423935..1424073,1425508..1425635,1425719..1425843,1426213..1426617,1427103..1427187,1427277..1427442,1427521..1427719,1428461..1428535,1428623..1428848,1428929..1429041,1429124..1429295,1429399..1429584,1429665..1429776,1429878..1429957,1430028..1430189,1430282..1430456,1430534..1430695,1431471..1431553,1431630..1431707,1431785..1431871,1431954..1432198)
location: region:1420101-1432198:1
so has part: feature:1420101-1420254:1:exon
so has part: feature:1422517-1422843:1:exon
so has part: feature:1423237-1423397:1:exon
so has part: feature:1423495-1423615:1:exon
so has part: feature:1423935-1424073:1:exon
so has part: feature:1425508-1425635:1:exon
so has part: feature:1425719-1425843:1:exon
so has part: feature:1426213-1426617:1:exon
so has part: feature:1427103-1427187:1:exon
so has part: feature:1427277-1427442:1:exon
so has part: feature:1427521-1427719:1:exon
so has part: feature:1428461-1428535:1:exon
so has part: feature:1428623-1428848:1:exon
so has part: feature:1428929-1429041:1:exon
so has part: feature:1429124-1429295:1:exon
so has part: feature:1429399-1429584:1:exon
so has part: feature:1429665-1429776:1:exon
so has part: feature:1429878-1429957:1:exon
so has part: feature:1430028-1430189:1:exon
so has part: feature:1430282-1430456:1:exon
so has part: feature:1430534-1430695:1:exon
so has part: feature:1431471-1431553:1:exon
so has part: feature:1431630-1431707:1:exon
so has part: feature:1431785-1431871:1:exon
so has part: feature:1431954-1432198:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1420101-1420254:1:exon

position:1420254:1
position: 1420254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1422517-1422843:1:exon

position:1422517:1
position: 1422517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1422843:1
position: 1422843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1423237-1423397:1:exon

position:1423237:1
position: 1423237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1423397:1
position: 1423397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1423495-1423615:1:exon

position:1423495:1
position: 1423495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1423615:1
position: 1423615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1423935-1424073:1:exon

position:1423935:1
position: 1423935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1424073:1
position: 1424073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1425508-1425635:1:exon

position:1425508:1
position: 1425508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1425635:1
position: 1425635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1425719-1425843:1:exon

position:1425719:1
position: 1425719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1425843:1
position: 1425843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1426213-1426617:1:exon

position:1426213:1
position: 1426213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1426617:1
position: 1426617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1427103-1427187:1:exon

position:1427103:1
position: 1427103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1427187:1
position: 1427187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1427277-1427442:1:exon

position:1427277:1
position: 1427277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1427442:1
position: 1427442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1427521-1427719:1:exon

position:1427521:1
position: 1427521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1427719:1
position: 1427719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1428461-1428535:1:exon

position:1428461:1
position: 1428461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1428535:1
position: 1428535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1428623-1428848:1:exon

position:1428623:1
position: 1428623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1428848:1
position: 1428848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1428929-1429041:1:exon

position:1428929:1
position: 1428929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1429041:1
position: 1429041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1429124-1429295:1:exon

position:1429124:1
position: 1429124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1429295:1
position: 1429295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1429399-1429584:1:exon

position:1429399:1
position: 1429399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1429584:1
position: 1429584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1429665-1429776:1:exon

position:1429665:1
position: 1429665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1429776:1
position: 1429776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1429878-1429957:1:exon

position:1429878:1
position: 1429878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1429957:1
position: 1429957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1430028-1430189:1:exon

position:1430028:1
position: 1430028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1430189:1
position: 1430189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1430282-1430456:1:exon

position:1430282:1
position: 1430282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1430456:1
position: 1430456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1430534-1430695:1:exon

position:1430534:1
position: 1430534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1430695:1
position: 1430695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1431471-1431553:1:exon

position:1431471:1
position: 1431471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1431553:1
position: 1431553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1431630-1431707:1:exon

position:1431630:1
position: 1431630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1431707:1
position: 1431707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1431785-1431871:1:exon

position:1431785:1
position: 1431785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1431871:1
position: 1431871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1431954-1432198:1:exon

position:1431954:1
position: 1431954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ROBO3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ROBO3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 3
translation: MLRYLLKTLLQMNLFADSLGTEGSNSSGLLPGPYPNGTGPPGPPLLLGLGNGSHPLLEDTAPRIIQHPTDLLVSRGDPATLHCRAEGRPAPTVEWYKDGERVGTGREDPRSHRTLLPGGSLYLPRTLPGRRGRTDEGVYVCVARNYLGVATSRNASLELAVLREDFRQPPGDVAVASGDPAVLECVPPRGHPEPSISWKKDGARLGDRDNERLTIRGGKLMVAPTRKSDTGLYVCVATNVAGERDSAPARLLVLERPAFSRRPQDQAVLVGVTAQFPCQAGGDPQPDVRWHKEEGTMPAGRWDILPDNTLRLRALRPEDRGTYTCTADNGVGRVQASATLTVHVPPQLVTGPRDQSVIPGQNVTFPCRSRGNPPPAIFWQKEGTQTLLFPGQLHLPSTHLWVSSTGTLTITNVTHVDAGSYLCQALSVAGSLMARATLQVAQGESLSLQTSPTPPAPMAPTAHPPVTHRGPTNRRVPCRGVGHGDPPTKGGMQKDGSTLGTTQASTNLLESSTLQSSELRQVMDLGNYECMATSLEGETPWGGSLEVPGDGFNLSPPSESGVLPGPPSTPVITNVTESSVTLSWKGNVDSSATNVTSYVVEAFSQAAGGPWQTVAADVEGETHTVSGLVPSTVYLFLVRAANAHGLSDPSGLSEPVRTQGETWRHPLGGGELAQVTVHLQDPVVLPPGTVRLSWTVEHPAPFLAGYRVLLRRGGSGHWEEARAARAVPGDQGVLLTHLRHGQDYQVKVQPYFHHLHGPDSAVRALRTPEAAPSAPPRAVTVAWNGTSVRISWQPPPVAEQNGIIRHYQIWCLGNESRFHINQSVEGTVLATILRGLVPGVPYHAQVAAATGAGLGARSAPVPIPMAPPAERDVGPAGVLSVAQRWAEVARRPVFIAGVGVAAWLLLAAFAVWLYSRRRRKKELSHFTASFAYTPAGDPMGAARTRLGTSPPPLSSVSFPAHGGSRAAGGGGHPWLADAWHGGLGTAERYYNDAGITRYIAQTELFGARGEEPGTFPRPFSQHGTLYPTGSSQPMEVPVPHSWTEHGAKGTKLGQSVKPPIVNWMEVKPPVVSWTDLLPPPPSASELSHCAQEEEEDEEEEAAGGLGMEQWCPGEDVPCTTTPSSPTVSSPSTATLTPSPCATEDVPHLRDFHSPHLLRTTPPGAEPPSPDAVGPSVPQAQRPPGRGTTRGDTSKCRPKPKCSRYRREKQLGELPPPPVPPPGQPPGHPLEPNGAHHHVSLDEVVPYGKALGPPWGQASGGGSTTGSVSSRGSTSSRGHSSGHAWTPGDHGQGAGHRSQGTGHRSQGTGHHRQPGPQAQEKR
SIO_010081: ROBO3
subclass of: SO_0000673
so part of: ROBO3
location: join(1420101..1420254,1422517..1422843,1423237..1423397,1423495..1423615,1423935..1424073,1425508..1425635,1425719..1425843,1426213..1426617,1427103..1427187,1427277..1427442,1427521..1427719,1428461..1428535,1428623..1428848,1428929..1429041,1429124..1429295,1429399..1429584,1429665..1429776,1429878..1429957,1430028..1430189,1430282..1430456,1430534..1430695,1431471..1431553,1431630..1431707,1431785..1431871,1431954..1432198)
location: region:1420101-1432198:1
so has part: feature:1420101-1420254:1:exon
so has part: feature:1422517-1422843:1:exon
so has part: feature:1423237-1423397:1:exon
so has part: feature:1423495-1423615:1:exon
so has part: feature:1423935-1424073:1:exon
so has part: feature:1425508-1425635:1:exon
so has part: feature:1425719-1425843:1:exon
so has part: feature:1426213-1426617:1:exon
so has part: feature:1427103-1427187:1:exon
so has part: feature:1427277-1427442:1:exon
so has part: feature:1427521-1427719:1:exon
so has part: feature:1428461-1428535:1:exon
so has part: feature:1428623-1428848:1:exon
so has part: feature:1428929-1429041:1:exon
so has part: feature:1429124-1429295:1:exon
so has part: feature:1429399-1429584:1:exon
so has part: feature:1429665-1429776:1:exon
so has part: feature:1429878-1429957:1:exon
so has part: feature:1430028-1430189:1:exon
so has part: feature:1430282-1430456:1:exon
so has part: feature:1430534-1430695:1:exon
so has part: feature:1431471-1431553:1:exon
so has part: feature:1431630-1431707:1:exon
so has part: feature:1431785-1431871:1:exon
so has part: feature:1431954-1432198:1:exon

XP_030320506.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1420101-1420254:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1422517-1422843:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1423237-1423397:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1423495-1423615:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1423935-1424073:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1425508-1425635:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1425719-1425843:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1426213-1426617:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1427103-1427187:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1427277-1427442:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1427521-1427719:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1428461-1428535:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1428623-1428848:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1428929-1429041:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1429124-1429295:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1429399-1429584:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1429665-1429776:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1429878-1429957:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1430028-1430189:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1430282-1430456:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1430534-1430695:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1431471-1431553:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1431630-1431707:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1431785-1431871:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1431954-1432198:1:exon

ROBO4
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ROBO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1432264..1439627)
location: region:1432264-1439627:-1
so has part: feature:1432264-1439627:-1:exon
subclass of: SO_0000010

103532718
type: Gene
SIO_000068: ncbigene

position:1432264:-1
position: 1432264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1439627:-1
position: 1439627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1432264-1439627:-1:exon

ROBO4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ROBO4
product: roundabout guidance receptor 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464890.1
SIO_010081: ROBO4
subclass of: SO_0000673
so part of: ROBO4
location: complement(join(1432264..1433118,1433204..1433303,1433413..1433960,1434052..1434636,1434729..1434960,1435350..1435526,1435933..1436054,1436141..1436291,1436380..1436551,1437139..1437254,1437341..1437560,1437863..1437975,1438711..1438838,1438914..1439052,1439130..1439411,1439490..1439627))
location: region:1432264-1439627:-1
so has part: feature:1439490-1439627:-1:exon
so has part: feature:1439130-1439411:-1:exon
so has part: feature:1438914-1439052:-1:exon
so has part: feature:1438711-1438838:-1:exon
so has part: feature:1437863-1437975:-1:exon
so has part: feature:1437341-1437560:-1:exon
so has part: feature:1437139-1437254:-1:exon
so has part: feature:1436380-1436551:-1:exon
so has part: feature:1436141-1436291:-1:exon
so has part: feature:1435933-1436054:-1:exon
so has part: feature:1435350-1435526:-1:exon
so has part: feature:1434729-1434960:-1:exon
so has part: feature:1434052-1434636:-1:exon
so has part: feature:1433413-1433960:-1:exon
so has part: feature:1433204-1433303:-1:exon
so has part: feature:1432264-1433118:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1439490-1439627:-1:exon

position:1439490:-1
position: 1439490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1439130-1439411:-1:exon

position:1439130:-1
position: 1439130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1439411:-1
position: 1439411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1438914-1439052:-1:exon

position:1438914:-1
position: 1438914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1439052:-1
position: 1439052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1438711-1438838:-1:exon

position:1438711:-1
position: 1438711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1438838:-1
position: 1438838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1437863-1437975:-1:exon

position:1437863:-1
position: 1437863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1437975:-1
position: 1437975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1437341-1437560:-1:exon

position:1437341:-1
position: 1437341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1437560:-1
position: 1437560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1437139-1437254:-1:exon

position:1437139:-1
position: 1437139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1437254:-1
position: 1437254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1436380-1436551:-1:exon

position:1436380:-1
position: 1436380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1436551:-1
position: 1436551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1436141-1436291:-1:exon

position:1436141:-1
position: 1436141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1436291:-1
position: 1436291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1435933-1436054:-1:exon

position:1435933:-1
position: 1435933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1436054:-1
position: 1436054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1435350-1435526:-1:exon

position:1435350:-1
position: 1435350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1435526:-1
position: 1435526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1434729-1434960:-1:exon

position:1434729:-1
position: 1434729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1434960:-1
position: 1434960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1434052-1434636:-1:exon

position:1434052:-1
position: 1434052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1434636:-1
position: 1434636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1433413-1433960:-1:exon

position:1433413:-1
position: 1433413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1433960:-1
position: 1433960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1433204-1433303:-1:exon

position:1433204:-1
position: 1433204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1433303:-1
position: 1433303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1432264-1433118:-1:exon

position:1433118:-1
position: 1433118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ROBO4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ROBO4
product: roundabout guidance receptor 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464889.1
SIO_010081: ROBO4
subclass of: SO_0000673
so part of: ROBO4
location: complement(join(1432264..1433118,1433204..1433303,1433413..1433960,1434052..1434636,1434729..1434960,1435350..1435526,1435933..1436054,1436141..1436291,1436380..1436551,1437139..1437254,1437341..1437560,1437863..1437975,1438711..1438838,1438914..1439052,1439130..1439627))
location: region:1432264-1439627:-1
so has part: feature:1439130-1439627:-1:exon
so has part: feature:1438914-1439052:-1:exon
so has part: feature:1438711-1438838:-1:exon
so has part: feature:1437863-1437975:-1:exon
so has part: feature:1437341-1437560:-1:exon
so has part: feature:1437139-1437254:-1:exon
so has part: feature:1436380-1436551:-1:exon
so has part: feature:1436141-1436291:-1:exon
so has part: feature:1435933-1436054:-1:exon
so has part: feature:1435350-1435526:-1:exon
so has part: feature:1434729-1434960:-1:exon
so has part: feature:1434052-1434636:-1:exon
so has part: feature:1433413-1433960:-1:exon
so has part: feature:1433204-1433303:-1:exon
so has part: feature:1432264-1433118:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1439130-1439627:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1438914-1439052:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1438711-1438838:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1437863-1437975:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1437341-1437560:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1437139-1437254:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1436380-1436551:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1436141-1436291:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1435933-1436054:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1435350-1435526:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1434729-1434960:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1434052-1434636:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1433413-1433960:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1433204-1433303:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1432264-1433118:-1:exon

ROBO4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ROBO4
product: roundabout guidance receptor 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464891.1
SIO_010081: ROBO4
subclass of: SO_0000673
so part of: ROBO4
location: complement(join(1432264..1433118,1433204..1433303,1433413..1433960,1434052..1434636,1434729..1434960,1435350..1435526,1435933..1436054,1436141..1436291,1436380..1436551,1437139..1437254,1437341..1437560,1437863..1437970,1438711..1438838,1438914..1439001))
location: region:1432264-1439001:-1
so has part: feature:1438914-1439001:-1:exon
so has part: feature:1438711-1438838:-1:exon
so has part: feature:1437863-1437970:-1:exon
so has part: feature:1437341-1437560:-1:exon
so has part: feature:1437139-1437254:-1:exon
so has part: feature:1436380-1436551:-1:exon
so has part: feature:1436141-1436291:-1:exon
so has part: feature:1435933-1436054:-1:exon
so has part: feature:1435350-1435526:-1:exon
so has part: feature:1434729-1434960:-1:exon
so has part: feature:1434052-1434636:-1:exon
so has part: feature:1433413-1433960:-1:exon
so has part: feature:1433204-1433303:-1:exon
so has part: feature:1432264-1433118:-1:exon

position:1439001:-1
position: 1439001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1438914-1439001:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1438711-1438838:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1437863-1437970:-1:exon

position:1437970:-1
position: 1437970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1437341-1437560:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1437139-1437254:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1436380-1436551:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1436141-1436291:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1435933-1436054:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1435350-1435526:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1434729-1434960:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1434052-1434636:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1433413-1433960:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1433204-1433303:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1432264-1433118:-1:exon

ROBO4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ROBO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 4 isoform X2
translation: MVGSWAAVLGLALCLAAGAEHVPPQPAAALLRDNFRLQPGDLVATVGQELELDCVPPSGHPEPRVTWKKDGVTLDPSGERYVVTEGKLRVMAAQRSDSGLYVCMATNTAGQRESRGARVTVLEKPTITRHPSDTVAVVGGTVELGCGAQGDPVPRVQWHKERGDLPWGRHEVDQEHTLHLYAVTPADAGTYVCTAQSQLGTAAATAHLHVQDQLPPGRREPTPQDLLAMRLHLENGTTLPAGTVWLRWRMVTPVPAPEGYMVLYRSLLPASTSWAQHNAGKELSTTIPALRRGHQYEFKVRPYSGGTQGLDSNSRNLWIPEEVPSAAPQSVTVAEKGNGTVVVSWEPPPPEAHNGIIRGYKVWSTSEGWQHPTNRTVYGGTRHLEAPLPTSGVEFCVQVAAFTSVGAGVPSNVTCSLLGWSAGSSRVVQVLRQPAVIAATSSLLWVALVLLLLLLCQRRAGQDNTTRGGLVASDSPWLGGPWKPGCAPHNLSSSSSLSSRLLGSDPHPSSLSLEHPSLGPPTPPPHSSCSGGHLAAPEDTGTCGRGHFGVHSSPSTPTPAPWERGHKKAHPELHPVHSTPVLTGGPGHVPVTGSRDKGGTDLGLGARWPWPRGSEGDTGGDPWRLPAFSSPRAPRPPHAWHPPVTRSPATVCPSDIFLVTGCPKDISLVIRRPKDVSSVTGIPKDVSPVTRHPKDVSPVTGIPRDMSPTTQCPKDTFLVTESPQDVSPVTRHPRDMSPTTRHKKDKISATRPPDEMSPVTRHLRNMSSVPGHCRDMVLGSRYSNDMSPATRHPRDPSVVTKQQRDTFLPSRYPEDMSPVTRHPEEMSPASSHRKDTFLSSRYPKDTRTRLPQDGSPLPGRLSPVLSDGVLTPQQVAEDLEMDQATTCPRSAPSSWDTTTVADDLKMDQATTMSPCSPPVLRSFSPTHTYGYIYGPPASELDEGEEEEEEEEEEEEQPGMRGSLGGSLLNGWGSVSEDNLASARCSLVSSCDGSFLLDASFARALAVAVDGLCFSLEDTDESYRGPSPSLSPLERIFSPDVPIPPLGLGDSAGGSTAGWSQDRDQQHLGWGR
SIO_010081: ROBO4
subclass of: SO_0000673
so part of: ROBO4
location: complement(join(1433073..1433118,1433204..1433303,1433413..1433960,1434052..1434636,1434729..1434960,1435350..1435526,1435933..1436054,1436141..1436291,1436380..1436551,1437139..1437254,1437341..1437560,1437863..1437975,1438711..1438838,1438914..1439052,1439130..1439411,1439490..1439574))
location: region:1433073-1439574:-1
so has part: feature:1439490-1439574:-1:exon
so has part: feature:1439130-1439411:-1:exon
so has part: feature:1438914-1439052:-1:exon
so has part: feature:1438711-1438838:-1:exon
so has part: feature:1437863-1437975:-1:exon
so has part: feature:1437341-1437560:-1:exon
so has part: feature:1437139-1437254:-1:exon
so has part: feature:1436380-1436551:-1:exon
so has part: feature:1436141-1436291:-1:exon
so has part: feature:1435933-1436054:-1:exon
so has part: feature:1435350-1435526:-1:exon
so has part: feature:1434729-1434960:-1:exon
so has part: feature:1434052-1434636:-1:exon
so has part: feature:1433413-1433960:-1:exon
so has part: feature:1433204-1433303:-1:exon
so has part: feature:1433073-1433118:-1:exon

XP_030320750.1
type: Protein
SIO_000068: ncbiprotein

position:1433073:-1
position: 1433073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1439574:-1
position: 1439574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1439490-1439574:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1439130-1439411:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1438914-1439052:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438711-1438838:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1437863-1437975:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1437341-1437560:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1437139-1437254:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1436380-1436551:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1436141-1436291:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1435933-1436054:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1435350-1435526:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1434729-1434960:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1434052-1434636:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1433413-1433960:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1433204-1433303:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1433073-1433118:-1:exon

ROBO4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ROBO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 4 isoform X1
translation: MVGSWAAVLGLALCLAAGAEHVPPQPAAGKDSPASGGTPKGPTPPHLAMSLPAAALLRDNFRLQPGDLVATVGQELELDCVPPSGHPEPRVTWKKDGVTLDPSGERYVVTEGKLRVMAAQRSDSGLYVCMATNTAGQRESRGARVTVLEKPTITRHPSDTVAVVGGTVELGCGAQGDPVPRVQWHKERGDLPWGRHEVDQEHTLHLYAVTPADAGTYVCTAQSQLGTAAATAHLHVQDQLPPGRREPTPQDLLAMRLHLENGTTLPAGTVWLRWRMVTPVPAPEGYMVLYRSLLPASTSWAQHNAGKELSTTIPALRRGHQYEFKVRPYSGGTQGLDSNSRNLWIPEEVPSAAPQSVTVAEKGNGTVVVSWEPPPPEAHNGIIRGYKVWSTSEGWQHPTNRTVYGGTRHLEAPLPTSGVEFCVQVAAFTSVGAGVPSNVTCSLLGWSAGSSRVVQVLRQPAVIAATSSLLWVALVLLLLLLCQRRAGQDNTTRGGLVASDSPWLGGPWKPGCAPHNLSSSSSLSSRLLGSDPHPSSLSLEHPSLGPPTPPPHSSCSGGHLAAPEDTGTCGRGHFGVHSSPSTPTPAPWERGHKKAHPELHPVHSTPVLTGGPGHVPVTGSRDKGGTDLGLGARWPWPRGSEGDTGGDPWRLPAFSSPRAPRPPHAWHPPVTRSPATVCPSDIFLVTGCPKDISLVIRRPKDVSSVTGIPKDVSPVTRHPKDVSPVTGIPRDMSPTTQCPKDTFLVTESPQDVSPVTRHPRDMSPTTRHKKDKISATRPPDEMSPVTRHLRNMSSVPGHCRDMVLGSRYSNDMSPATRHPRDPSVVTKQQRDTFLPSRYPEDMSPVTRHPEEMSPASSHRKDTFLSSRYPKDTRTRLPQDGSPLPGRLSPVLSDGVLTPQQVAEDLEMDQATTCPRSAPSSWDTTTVADDLKMDQATTMSPCSPPVLRSFSPTHTYGYIYGPPASELDEGEEEEEEEEEEEEQPGMRGSLGGSLLNGWGSVSEDNLASARCSLVSSCDGSFLLDASFARALAVAVDGLCFSLEDTDESYRGPSPSLSPLERIFSPDVPIPPLGLGDSAGGSTAGWSQDRDQQHLGWGR
SIO_010081: ROBO4
subclass of: SO_0000673
so part of: ROBO4
location: complement(join(1433073..1433118,1433204..1433303,1433413..1433960,1434052..1434636,1434729..1434960,1435350..1435526,1435933..1436054,1436141..1436291,1436380..1436551,1437139..1437254,1437341..1437560,1437863..1437975,1438711..1438838,1438914..1439052,1439130..1439574))
location: region:1433073-1439574:-1
so has part: feature:1439130-1439574:-1:exon
so has part: feature:1438914-1439052:-1:exon
so has part: feature:1438711-1438838:-1:exon
so has part: feature:1437863-1437975:-1:exon
so has part: feature:1437341-1437560:-1:exon
so has part: feature:1437139-1437254:-1:exon
so has part: feature:1436380-1436551:-1:exon
so has part: feature:1436141-1436291:-1:exon
so has part: feature:1435933-1436054:-1:exon
so has part: feature:1435350-1435526:-1:exon
so has part: feature:1434729-1434960:-1:exon
so has part: feature:1434052-1434636:-1:exon
so has part: feature:1433413-1433960:-1:exon
so has part: feature:1433204-1433303:-1:exon
so has part: feature:1433073-1433118:-1:exon

XP_030320749.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1439130-1439574:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1438914-1439052:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1438711-1438838:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1437863-1437975:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1437341-1437560:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1437139-1437254:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1436380-1436551:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1436141-1436291:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1435933-1436054:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1435350-1435526:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1434729-1434960:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1434052-1434636:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1433413-1433960:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1433204-1433303:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1433073-1433118:-1:exon

ROBO4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ROBO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 4 isoform X3
translation: MPAPTSARRRASWAPPPPPPTYTCRLPPGRREPTPQDLLAMRLHLENGTTLPAGTVWLRWRMVTPVPAPEGYMVLYRSLLPASTSWAQHNAGKELSTTIPALRRGHQYEFKVRPYSGGTQGLDSNSRNLWIPEEVPSAAPQSVTVAEKGNGTVVVSWEPPPPEAHNGIIRGYKVWSTSEGWQHPTNRTVYGGTRHLEAPLPTSGVEFCVQVAAFTSVGAGVPSNVTCSLLGWSAGSSRVVQVLRQPAVIAATSSLLWVALVLLLLLLCQRRAGQDNTTRGGLVASDSPWLGGPWKPGCAPHNLSSSSSLSSRLLGSDPHPSSLSLEHPSLGPPTPPPHSSCSGGHLAAPEDTGTCGRGHFGVHSSPSTPTPAPWERGHKKAHPELHPVHSTPVLTGGPGHVPVTGSRDKGGTDLGLGARWPWPRGSEGDTGGDPWRLPAFSSPRAPRPPHAWHPPVTRSPATVCPSDIFLVTGCPKDISLVIRRPKDVSSVTGIPKDVSPVTRHPKDVSPVTGIPRDMSPTTQCPKDTFLVTESPQDVSPVTRHPRDMSPTTRHKKDKISATRPPDEMSPVTRHLRNMSSVPGHCRDMVLGSRYSNDMSPATRHPRDPSVVTKQQRDTFLPSRYPEDMSPVTRHPEEMSPASSHRKDTFLSSRYPKDTRTRLPQDGSPLPGRLSPVLSDGVLTPQQVAEDLEMDQATTCPRSAPSSWDTTTVADDLKMDQATTMSPCSPPVLRSFSPTHTYGYIYGPPASELDEGEEEEEEEEEEEEQPGMRGSLGGSLLNGWGSVSEDNLASARCSLVSSCDGSFLLDASFARALAVAVDGLCFSLEDTDESYRGPSPSLSPLERIFSPDVPIPPLGLGDSAGGSTAGWSQDRDQQHLGWGR
SIO_010081: ROBO4
subclass of: SO_0000673
so part of: ROBO4
location: complement(join(1433073..1433118,1433204..1433303,1433413..1433960,1434052..1434636,1434729..1434960,1435350..1435526,1435933..1436054,1436141..1436291,1436380..1436551,1437139..1437254,1437341..1437560,1437863..1437970,1438711..1438785))
location: region:1433073-1438785:-1
so has part: feature:1438711-1438785:-1:exon
so has part: feature:1437863-1437970:-1:exon
so has part: feature:1437341-1437560:-1:exon
so has part: feature:1437139-1437254:-1:exon
so has part: feature:1436380-1436551:-1:exon
so has part: feature:1436141-1436291:-1:exon
so has part: feature:1435933-1436054:-1:exon
so has part: feature:1435350-1435526:-1:exon
so has part: feature:1434729-1434960:-1:exon
so has part: feature:1434052-1434636:-1:exon
so has part: feature:1433413-1433960:-1:exon
so has part: feature:1433204-1433303:-1:exon
so has part: feature:1433073-1433118:-1:exon

XP_030320751.1
type: Protein
SIO_000068: ncbiprotein

position:1438785:-1
position: 1438785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1438711-1438785:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1437863-1437970:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1437341-1437560:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1437139-1437254:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1436380-1436551:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1436141-1436291:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1435933-1436054:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1435350-1435526:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1434729-1434960:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1434052-1434636:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1433413-1433960:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1433204-1433303:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1433073-1433118:-1:exon

HEPACAM
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: HEPACAM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1441112..1445670)
location: region:1441112-1445670:-1
so has part: feature:1441112-1445670:-1:exon
subclass of: SO_0000010

103532695
type: Gene
SIO_000068: ncbigene

position:1441112:-1
position: 1441112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1445670:-1
position: 1445670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1441112-1445670:-1:exon

HEPACAM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: HEPACAM
product: hepatic and glial cell adhesion molecule
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 69% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008498482.2
SIO_010081: HEPACAM
subclass of: SO_0000673
so part of: HEPACAM
location: complement(join(1441112..1441402,1441486..1441556,1442008..1442081,1442443..1442536,1442647..1442928,1443153..1443494,1445586..1445670))
location: region:1441112-1445670:-1
so has part: feature:1445586-1445670:-1:exon
so has part: feature:1443153-1443494:-1:exon
so has part: feature:1442647-1442928:-1:exon
so has part: feature:1442443-1442536:-1:exon
so has part: feature:1442008-1442081:-1:exon
so has part: feature:1441486-1441556:-1:exon
so has part: feature:1441112-1441402:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1445586-1445670:-1:exon

position:1445586:-1
position: 1445586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1443153-1443494:-1:exon

position:1443153:-1
position: 1443153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1443494:-1
position: 1443494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1442647-1442928:-1:exon

position:1442647:-1
position: 1442647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1442928:-1
position: 1442928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1442443-1442536:-1:exon

position:1442443:-1
position: 1442443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1442536:-1
position: 1442536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1442008-1442081:-1:exon

position:1442008:-1
position: 1442008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1442081:-1
position: 1442081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1441486-1441556:-1:exon

position:1441486:-1
position: 1441486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1441556:-1
position: 1441556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1441112-1441402:-1:exon

position:1441402:-1
position: 1441402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HEPACAM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: HEPACAM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatocyte cell adhesion molecule
translation: MWGAPITPGGHPTPPGLLPLTCLLALHAGLLAGVNITSPTALVRGTAGKAALLSVRYASASADKPVVKWQVKRDKPVTVVQSIGTEIIGNLRPDYRDRIRVLENGSLLISPLQLADEGAYEVEVSITDDTFTGEKTINLTVDIPISKPQVLVASSTVLELSEFFTLNCSHENGTKPTYTWLKDGRPLSNDSRLLLSPDQKILTITRVLMADDDVYSCLVENPISHGRSVPVKLTVYRRSSLYIILSTGGIFLLVTLVTVCACWKPSKKEKRQAESQPSPEFSEQDEERLKHEAEGVPRSGDHDRKNPVALYILKDKDSPEAEEDSLPEPRVAVEPGYTSSPCPTAGRSPGPPVARSTRRYHRSPARSPASTRTHRSPPGSPARSRGAPRLLRTAGVHVIREQEEANAVEISA
SIO_010081: HEPACAM
subclass of: SO_0000673
so part of: HEPACAM
location: complement(join(1441112..1441402,1441486..1441556,1442008..1442081,1442443..1442536,1442647..1442928,1443153..1443494,1445586..1445670))
location: region:1441112-1445670:-1
so has part: feature:1445586-1445670:-1:exon
so has part: feature:1443153-1443494:-1:exon
so has part: feature:1442647-1442928:-1:exon
so has part: feature:1442443-1442536:-1:exon
so has part: feature:1442008-1442081:-1:exon
so has part: feature:1441486-1441556:-1:exon
so has part: feature:1441112-1441402:-1:exon

XP_008496704.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1445586-1445670:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1443153-1443494:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1442647-1442928:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1442443-1442536:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1442008-1442081:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1441486-1441556:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1441112-1441402:-1:exon

CCDC15
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: CCDC15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1446326..1459588
location: region:1446326-1459588:1
so has part: feature:1446326-1459588:1:exon
subclass of: SO_0000010

115599616
type: Gene
SIO_000068: ncbigene

position:1446326:1
position: 1446326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1459588:1
position: 1459588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1446326-1459588:1:exon

CCDC15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CCDC15
product: coiled-coil domain containing 15, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464769.1
SIO_010081: CCDC15
subclass of: SO_0000673
so part of: CCDC15
location: join(1446326..1446391,1447714..1447875,1448878..1449027,1450492..1450662,1451790..1451894,1454639..1454785,1455202..1455321,1456376..1456479,1458275..1458454,1458529..1458677,1459307..1459588)
location: region:1446326-1459588:1
so has part: feature:1446326-1446391:1:exon
so has part: feature:1447714-1447875:1:exon
so has part: feature:1448878-1449027:1:exon
so has part: feature:1450492-1450662:1:exon
so has part: feature:1451790-1451894:1:exon
so has part: feature:1454639-1454785:1:exon
so has part: feature:1455202-1455321:1:exon
so has part: feature:1456376-1456479:1:exon
so has part: feature:1458275-1458454:1:exon
so has part: feature:1458529-1458677:1:exon
so has part: feature:1459307-1459588:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1446326-1446391:1:exon

position:1446391:1
position: 1446391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1447714-1447875:1:exon

position:1447714:1
position: 1447714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1447875:1
position: 1447875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1448878-1449027:1:exon

position:1448878:1
position: 1448878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1449027:1
position: 1449027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1450492-1450662:1:exon

position:1450492:1
position: 1450492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1450662:1
position: 1450662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1451790-1451894:1:exon

position:1451790:1
position: 1451790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1451894:1
position: 1451894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1454639-1454785:1:exon

position:1454639:1
position: 1454639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1454785:1
position: 1454785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1455202-1455321:1:exon

position:1455202:1
position: 1455202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1455321:1
position: 1455321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1456376-1456479:1:exon

position:1456376:1
position: 1456376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1456479:1
position: 1456479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1458275-1458454:1:exon

position:1458275:1
position: 1458275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1458454:1
position: 1458454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1458529-1458677:1:exon

position:1458529:1
position: 1458529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1458677:1
position: 1458677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1459307-1459588:1:exon

position:1459307:1
position: 1459307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CCDC15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CCDC15
product: coiled-coil domain containing 15, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464772.1
SIO_010081: CCDC15
subclass of: SO_0000673
so part of: CCDC15
location: join(1446326..1446391,1447714..1447764,1448878..1449027,1450492..1450662,1451790..1451894,1454639..1454785,1455202..1455321,1456376..1456479,1458275..1458454,1458529..1458677,1459307..1459588)
location: region:1446326-1459588:1
so has part: feature:1446326-1446391:1:exon
so has part: feature:1447714-1447764:1:exon
so has part: feature:1448878-1449027:1:exon
so has part: feature:1450492-1450662:1:exon
so has part: feature:1451790-1451894:1:exon
so has part: feature:1454639-1454785:1:exon
so has part: feature:1455202-1455321:1:exon
so has part: feature:1456376-1456479:1:exon
so has part: feature:1458275-1458454:1:exon
so has part: feature:1458529-1458677:1:exon
so has part: feature:1459307-1459588:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1446326-1446391:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1447714-1447764:1:exon

position:1447764:1
position: 1447764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1448878-1449027:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1450492-1450662:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1451790-1451894:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1454639-1454785:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1455202-1455321:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1456376-1456479:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1458275-1458454:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1458529-1458677:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1459307-1459588:1:exon

CCDC15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CCDC15
product: coiled-coil domain containing 15, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464770.1
SIO_010081: CCDC15
subclass of: SO_0000673
so part of: CCDC15
location: join(1446719..1446773,1447714..1447875,1448878..1449027,1450492..1450662,1451790..1451894,1454639..1454785,1455202..1455321,1456376..1456479,1458275..1458454,1458529..1458677,1459307..1459588)
location: region:1446719-1459588:1
so has part: feature:1446719-1446773:1:exon
so has part: feature:1447714-1447875:1:exon
so has part: feature:1448878-1449027:1:exon
so has part: feature:1450492-1450662:1:exon
so has part: feature:1451790-1451894:1:exon
so has part: feature:1454639-1454785:1:exon
so has part: feature:1455202-1455321:1:exon
so has part: feature:1456376-1456479:1:exon
so has part: feature:1458275-1458454:1:exon
so has part: feature:1458529-1458677:1:exon
so has part: feature:1459307-1459588:1:exon

position:1446719:1
position: 1446719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1446719-1446773:1:exon

position:1446773:1
position: 1446773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1447714-1447875:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1448878-1449027:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1450492-1450662:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1451790-1451894:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1454639-1454785:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1455202-1455321:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1456376-1456479:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1458275-1458454:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1458529-1458677:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1459307-1459588:1:exon

CCDC15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CCDC15
product: coiled-coil domain containing 15, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464771.1
SIO_010081: CCDC15
subclass of: SO_0000673
so part of: CCDC15
location: join(1447513..1447523,1447714..1447875,1448878..1449027,1450492..1450662,1451790..1451894,1454639..1454785,1455202..1455321,1456376..1456479,1458275..1458454,1458529..1458677,1459307..1459588)
location: region:1447513-1459588:1
so has part: feature:1447513-1447523:1:exon
so has part: feature:1447714-1447875:1:exon
so has part: feature:1448878-1449027:1:exon
so has part: feature:1450492-1450662:1:exon
so has part: feature:1451790-1451894:1:exon
so has part: feature:1454639-1454785:1:exon
so has part: feature:1455202-1455321:1:exon
so has part: feature:1456376-1456479:1:exon
so has part: feature:1458275-1458454:1:exon
so has part: feature:1458529-1458677:1:exon
so has part: feature:1459307-1459588:1:exon

position:1447513:1
position: 1447513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1447513-1447523:1:exon

position:1447523:1
position: 1447523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1447714-1447875:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1448878-1449027:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1450492-1450662:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1451790-1451894:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1454639-1454785:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1455202-1455321:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1456376-1456479:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1458275-1458454:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1458529-1458677:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1459307-1459588:1:exon

CCDC15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CCDC15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 15 isoform X1
translation: MLPPCRDQRVRPPAPSRVLAPRSPSVVPVGVWVESALGQPQQSLAYVSALRVEEELKKQEKEKAARLRCFQVEVKRRVNQQVRLRRKQQLQRSYEAAERESCVAAQYAGSGLGRSPRKDTCLFRSHPTPTICCPSPAQHHGMQSEPFQQRATQLSKAMKQVRRRLVSCRTISAGAGPTQLPGGLWRREKAEPPLEEESEELLLVGHHDLPAELQDQDVALPRAEQEEDFYIKIEFKKSWDGSVKDSHSPESPQRPHTYGQTPLMLWAGADQEETKKQRQSEFLRHRRLFMSIEREQVKEQQRQRESQKRVTEIKGKKENQRRVEEQRLQEAADQTKLPQEEGIWEALAQHQLEERRVRKVKEKQQQNKENVRYIEALRAHLREKIKLSNIDLPPLCSCGSNFWDSHPDTCANNCVFYRNHRAYSHALQSLVLSCIPAARSPTARLRLRDLAALYARWGQHL
SIO_010081: CCDC15
subclass of: SO_0000673
so part of: CCDC15
location: join(1447738..1447875,1448878..1449027,1450492..1450662,1451790..1451894,1454639..1454785,1455202..1455321,1456376..1456479,1458275..1458454,1458529..1458677,1459307..1459428)
location: region:1447738-1459428:1
so has part: feature:1447738-1447875:1:exon
so has part: feature:1448878-1449027:1:exon
so has part: feature:1450492-1450662:1:exon
so has part: feature:1451790-1451894:1:exon
so has part: feature:1454639-1454785:1:exon
so has part: feature:1455202-1455321:1:exon
so has part: feature:1456376-1456479:1:exon
so has part: feature:1458275-1458454:1:exon
so has part: feature:1458529-1458677:1:exon
so has part: feature:1459307-1459428:1:exon

XP_030320629.1
type: Protein
SIO_000068: ncbiprotein

position:1447738:1
position: 1447738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1459428:1
position: 1459428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1447738-1447875:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1448878-1449027:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1450492-1450662:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1451790-1451894:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1454639-1454785:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1455202-1455321:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1456376-1456479:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1458275-1458454:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1458529-1458677:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1459307-1459428:1:exon

CCDC15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CCDC15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 15 isoform X1
translation: MLPPCRDQRVRPPAPSRVLAPRSPSVVPVGVWVESALGQPQQSLAYVSALRVEEELKKQEKEKAARLRCFQVEVKRRVNQQVRLRRKQQLQRSYEAAERESCVAAQYAGSGLGRSPRKDTCLFRSHPTPTICCPSPAQHHGMQSEPFQQRATQLSKAMKQVRRRLVSCRTISAGAGPTQLPGGLWRREKAEPPLEEESEELLLVGHHDLPAELQDQDVALPRAEQEEDFYIKIEFKKSWDGSVKDSHSPESPQRPHTYGQTPLMLWAGADQEETKKQRQSEFLRHRRLFMSIEREQVKEQQRQRESQKRVTEIKGKKENQRRVEEQRLQEAADQTKLPQEEGIWEALAQHQLEERRVRKVKEKQQQNKENVRYIEALRAHLREKIKLSNIDLPPLCSCGSNFWDSHPDTCANNCVFYRNHRAYSHALQSLVLSCIPAARSPTARLRLRDLAALYARWGQHL
SIO_010081: CCDC15
subclass of: SO_0000673
so part of: CCDC15
location: join(1447738..1447875,1448878..1449027,1450492..1450662,1451790..1451894,1454639..1454785,1455202..1455321,1456376..1456479,1458275..1458454,1458529..1458677,1459307..1459428)
location: region:1447738-1459428:1
so has part: feature:1447738-1447875:1:exon
so has part: feature:1448878-1449027:1:exon
so has part: feature:1450492-1450662:1:exon
so has part: feature:1451790-1451894:1:exon
so has part: feature:1454639-1454785:1:exon
so has part: feature:1455202-1455321:1:exon
so has part: feature:1456376-1456479:1:exon
so has part: feature:1458275-1458454:1:exon
so has part: feature:1458529-1458677:1:exon
so has part: feature:1459307-1459428:1:exon

XP_030320630.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1447738-1447875:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1448878-1449027:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1450492-1450662:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1451790-1451894:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1454639-1454785:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1455202-1455321:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1456376-1456479:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1458275-1458454:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1458529-1458677:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1459307-1459428:1:exon

CCDC15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CCDC15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 15 isoform X1
translation: MLPPCRDQRVRPPAPSRVLAPRSPSVVPVGVWVESALGQPQQSLAYVSALRVEEELKKQEKEKAARLRCFQVEVKRRVNQQVRLRRKQQLQRSYEAAERESCVAAQYAGSGLGRSPRKDTCLFRSHPTPTICCPSPAQHHGMQSEPFQQRATQLSKAMKQVRRRLVSCRTISAGAGPTQLPGGLWRREKAEPPLEEESEELLLVGHHDLPAELQDQDVALPRAEQEEDFYIKIEFKKSWDGSVKDSHSPESPQRPHTYGQTPLMLWAGADQEETKKQRQSEFLRHRRLFMSIEREQVKEQQRQRESQKRVTEIKGKKENQRRVEEQRLQEAADQTKLPQEEGIWEALAQHQLEERRVRKVKEKQQQNKENVRYIEALRAHLREKIKLSNIDLPPLCSCGSNFWDSHPDTCANNCVFYRNHRAYSHALQSLVLSCIPAARSPTARLRLRDLAALYARWGQHL
SIO_010081: CCDC15
subclass of: SO_0000673
so part of: CCDC15
location: join(1447738..1447875,1448878..1449027,1450492..1450662,1451790..1451894,1454639..1454785,1455202..1455321,1456376..1456479,1458275..1458454,1458529..1458677,1459307..1459428)
location: region:1447738-1459428:1
so has part: feature:1447738-1447875:1:exon
so has part: feature:1448878-1449027:1:exon
so has part: feature:1450492-1450662:1:exon
so has part: feature:1451790-1451894:1:exon
so has part: feature:1454639-1454785:1:exon
so has part: feature:1455202-1455321:1:exon
so has part: feature:1456376-1456479:1:exon
so has part: feature:1458275-1458454:1:exon
so has part: feature:1458529-1458677:1:exon
so has part: feature:1459307-1459428:1:exon

XP_030320631.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1447738-1447875:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1448878-1449027:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1450492-1450662:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1451790-1451894:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1454639-1454785:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1455202-1455321:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1456376-1456479:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1458275-1458454:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1458529-1458677:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1459307-1459428:1:exon

CCDC15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CCDC15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 15 isoform X2
translation: MLPPCRDQRVSALRVEEELKKQEKEKAARLRCFQVEVKRRVNQQVRLRRKQQLQRSYEAAERESCVAAQYAGSGLGRSPRKDTCLFRSHPTPTICCPSPAQHHGMQSEPFQQRATQLSKAMKQVRRRLVSCRTISAGAGPTQLPGGLWRREKAEPPLEEESEELLLVGHHDLPAELQDQDVALPRAEQEEDFYIKIEFKKSWDGSVKDSHSPESPQRPHTYGQTPLMLWAGADQEETKKQRQSEFLRHRRLFMSIEREQVKEQQRQRESQKRVTEIKGKKENQRRVEEQRLQEAADQTKLPQEEGIWEALAQHQLEERRVRKVKEKQQQNKENVRYIEALRAHLREKIKLSNIDLPPLCSCGSNFWDSHPDTCANNCVFYRNHRAYSHALQSLVLSCIPAARSPTARLRLRDLAALYARWGQHL
SIO_010081: CCDC15
subclass of: SO_0000673
so part of: CCDC15
location: join(1447738..1447764,1448878..1449027,1450492..1450662,1451790..1451894,1454639..1454785,1455202..1455321,1456376..1456479,1458275..1458454,1458529..1458677,1459307..1459428)
location: region:1447738-1459428:1
so has part: feature:1447738-1447764:1:exon
so has part: feature:1448878-1449027:1:exon
so has part: feature:1450492-1450662:1:exon
so has part: feature:1451790-1451894:1:exon
so has part: feature:1454639-1454785:1:exon
so has part: feature:1455202-1455321:1:exon
so has part: feature:1456376-1456479:1:exon
so has part: feature:1458275-1458454:1:exon
so has part: feature:1458529-1458677:1:exon
so has part: feature:1459307-1459428:1:exon

XP_030320632.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1447738-1447764:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1448878-1449027:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1450492-1450662:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1451790-1451894:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1454639-1454785:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1455202-1455321:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1456376-1456479:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1458275-1458454:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1458529-1458677:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1459307-1459428:1:exon

SLC37A2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SLC37A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1461398..1470435
location: region:1461398-1470435:1
so has part: feature:1461398-1470435:1:exon
subclass of: SO_0000010

103532717
type: Gene
SIO_000068: ncbigene

position:1461398:1
position: 1461398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1470435:1
position: 1470435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1461398-1470435:1:exon

SLC37A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SLC37A2
product: solute carrier family 37 member 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464737.1
SIO_010081: SLC37A2
subclass of: SO_0000673
so part of: SLC37A2
location: join(1461398..1461477,1463452..1463533,1463624..1463711,1463988..1464066,1464219..1464354,1464766..1464842,1464927..1465092,1465487..1465524,1465857..1466030,1466185..1466274,1466353..1466415,1466627..1466713,1467530..1467578,1467854..1467927,1468394..1468472,1468554..1468651,1468951..1469015,1469272..1469320,1469755..1469787,1470211..1470435)
location: region:1461398-1470435:1
so has part: feature:1461398-1461477:1:exon
so has part: feature:1463452-1463533:1:exon
so has part: feature:1463624-1463711:1:exon
so has part: feature:1463988-1464066:1:exon
so has part: feature:1464219-1464354:1:exon
so has part: feature:1464766-1464842:1:exon
so has part: feature:1464927-1465092:1:exon
so has part: feature:1465487-1465524:1:exon
so has part: feature:1465857-1466030:1:exon
so has part: feature:1466185-1466274:1:exon
so has part: feature:1466353-1466415:1:exon
so has part: feature:1466627-1466713:1:exon
so has part: feature:1467530-1467578:1:exon
so has part: feature:1467854-1467927:1:exon
so has part: feature:1468394-1468472:1:exon
so has part: feature:1468554-1468651:1:exon
so has part: feature:1468951-1469015:1:exon
so has part: feature:1469272-1469320:1:exon
so has part: feature:1469755-1469787:1:exon
so has part: feature:1470211-1470435:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1461398-1461477:1:exon

position:1461477:1
position: 1461477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1463452-1463533:1:exon

position:1463452:1
position: 1463452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1463533:1
position: 1463533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1463624-1463711:1:exon

position:1463624:1
position: 1463624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1463711:1
position: 1463711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1463988-1464066:1:exon

position:1463988:1
position: 1463988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1464066:1
position: 1464066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1464219-1464354:1:exon

position:1464219:1
position: 1464219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1464354:1
position: 1464354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1464766-1464842:1:exon

position:1464766:1
position: 1464766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1464842:1
position: 1464842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1464927-1465092:1:exon

position:1464927:1
position: 1464927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1465092:1
position: 1465092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1465487-1465524:1:exon

position:1465487:1
position: 1465487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1465524:1
position: 1465524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1465857-1466030:1:exon

position:1465857:1
position: 1465857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1466030:1
position: 1466030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1466185-1466274:1:exon

position:1466185:1
position: 1466185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1466274:1
position: 1466274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1466353-1466415:1:exon

position:1466353:1
position: 1466353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1466415:1
position: 1466415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1466627-1466713:1:exon

position:1466627:1
position: 1466627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1466713:1
position: 1466713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1467530-1467578:1:exon

position:1467530:1
position: 1467530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1467578:1
position: 1467578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1467854-1467927:1:exon

position:1467854:1
position: 1467854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1467927:1
position: 1467927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1468394-1468472:1:exon

position:1468394:1
position: 1468394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1468472:1
position: 1468472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1468554-1468651:1:exon

position:1468554:1
position: 1468554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1468651:1
position: 1468651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1468951-1469015:1:exon

position:1468951:1
position: 1468951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1469015:1
position: 1469015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1469272-1469320:1:exon

position:1469272:1
position: 1469272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1469320:1
position: 1469320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1469755-1469787:1:exon

position:1469755:1
position: 1469755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1469787:1
position: 1469787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1470211-1470435:1:exon

position:1470211:1
position: 1470211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC37A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SLC37A2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: glucose-6-phosphate exchanger SLC37A2
translation: MRAALAPGIRLLRAVPRDSRYRGLTLVLTFFCYTSYHLSRKPISIVKSQLHPNCTALGPSPHNDSNSSAWCSWAPFDGDNYKELFGALDNAFLVAYAIGMFISGIFGERLPLRYYLSGGMVLSGLFTALFGLGYFWDIHVLWYFIIVQVCNGLVQTTGWPSVVACVGNWFGKGKRGLIMGIWNSHTSVGNIXGSLIAGVWVSSTWGLSFVVPGVIIVVVGIICFFFLVEYPEDVGCSPPLHHMASDEEDARGVTSNQKDPEGIIPNEGPLSITGQSSVDRSDSPKEEPEAISFLGALRIPGVVEFSLCLLFAKLVSYTFLYWLPXYIVNIAHFSAKEAGDLSTLFDVGGILGGIFAGLISEYTGGRATTCCVMLVAAAPMLFLYNHVGQNGIGTSIAMLIICGALVNGPYALITTAVSADLGTHESLKGNSRALSTVTAIIDGTGSVGAALGPLLAGLISPTGWNNVFYMLIAADVLACLLLTRVVVKEVRGWCGFMVRKRGSSVQLTESVLDWK
SIO_010081: SLC37A2
subclass of: SO_0000673
so part of: SLC37A2
location: join(1461419..1461477,1463452..1463533,1463624..1463711,1463988..1464066,1464219..1464354,1464766..1464842,1464927..1465092,1465487..1465524,1465857..1466030,1466185..1466274,1466353..1466415,1466627..1466713,1467530..1467578,1467854..1467927,1468394..1468472,1468554..1468651,1468951..1469015,1469272..1469314)
location: region:1461419-1469314:1
so has part: feature:1461419-1461477:1:exon
so has part: feature:1463452-1463533:1:exon
so has part: feature:1463624-1463711:1:exon
so has part: feature:1463988-1464066:1:exon
so has part: feature:1464219-1464354:1:exon
so has part: feature:1464766-1464842:1:exon
so has part: feature:1464927-1465092:1:exon
so has part: feature:1465487-1465524:1:exon
so has part: feature:1465857-1466030:1:exon
so has part: feature:1466185-1466274:1:exon
so has part: feature:1466353-1466415:1:exon
so has part: feature:1466627-1466713:1:exon
so has part: feature:1467530-1467578:1:exon
so has part: feature:1467854-1467927:1:exon
so has part: feature:1468394-1468472:1:exon
so has part: feature:1468554-1468651:1:exon
so has part: feature:1468951-1469015:1:exon
so has part: feature:1469272-1469314:1:exon

XP_030320597.1
type: Protein
SIO_000068: ncbiprotein

position:1461419:1
position: 1461419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1469314:1
position: 1469314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1461419-1461477:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1463452-1463533:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1463624-1463711:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1463988-1464066:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1464219-1464354:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1464766-1464842:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1464927-1465092:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1465487-1465524:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1465857-1466030:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1466185-1466274:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1466353-1466415:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1466627-1466713:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1467530-1467578:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1467854-1467927:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1468394-1468472:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1468554-1468651:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1468951-1469015:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1469272-1469314:1:exon

TMEM218
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: TMEM218
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1474572..1476859)
location: region:1474572-1476859:-1
so has part: feature:1474572-1476859:-1:exon
subclass of: SO_0000010

103532716
type: Gene
SIO_000068: ncbigene

position:1474572:-1
position: 1474572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1476859:-1
position: 1476859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1474572-1476859:-1:exon

TMEM218
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TMEM218
product: transmembrane protein 218
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_008498505.2
SIO_010081: TMEM218
subclass of: SO_0000673
so part of: TMEM218
location: complement(join(1474572..1474780,1476536..1476638,1476750..1476859))
location: region:1474572-1476859:-1
so has part: feature:1476750-1476859:-1:exon
so has part: feature:1476536-1476638:-1:exon
so has part: feature:1474572-1474780:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1476750-1476859:-1:exon

position:1476750:-1
position: 1476750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1476536-1476638:-1:exon

position:1476536:-1
position: 1476536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1476638:-1
position: 1476638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1474572-1474780:-1:exon

position:1474780:-1
position: 1474780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM218
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TMEM218
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 218
translation: MAAMALGPGAWGAAPDAALGLALLLGVALTRAAGEARFAVVPVVLGAAVLSAALLLFPREGEHPVTAAADEIVDTFFHRPLCPPGCDEFGLPWCLFLLLVHHLTEPVVCQATPQELAATGGQ
SIO_010081: TMEM218
subclass of: SO_0000673
so part of: TMEM218
location: complement(join(1474625..1474780,1476536..1476638,1476750..1476859))
location: region:1474625-1476859:-1
so has part: feature:1476750-1476859:-1:exon
so has part: feature:1476536-1476638:-1:exon
so has part: feature:1474625-1474780:-1:exon

XP_008496727.2
type: Protein
SIO_000068: ncbiprotein

position:1474625:-1
position: 1474625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1476750-1476859:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1476536-1476638:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1474625-1474780:-1:exon

PKNOX2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PKNOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1483413..1553678
location: region:1483413-1553678:1
so has part: feature:1483413-1553678:1:exon
subclass of: SO_0000010

103532694
type: Gene
SIO_000068: ncbigene

position:1483413:1
position: 1483413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1553678:1
position: 1553678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1483413-1553678:1:exon

PKNOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PKNOX2
product: PBX/knotted 1 homeobox 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030464782.1
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: join(1483413..1483464,1521052..1521194,1521498..1521583,1528956..1529064,1534266..1534399,1538396..1538567,1541580..1541768,1547467..1547599,1547686..1547783,1549817..1549936,1551134..1551210,1551613..1551791,1552592..1553678)
location: region:1483413-1553678:1
so has part: feature:1483413-1483464:1:exon
so has part: feature:1521052-1521194:1:exon
so has part: feature:1521498-1521583:1:exon
so has part: feature:1528956-1529064:1:exon
so has part: feature:1534266-1534399:1:exon
so has part: feature:1538396-1538567:1:exon
so has part: feature:1541580-1541768:1:exon
so has part: feature:1547467-1547599:1:exon
so has part: feature:1547686-1547783:1:exon
so has part: feature:1549817-1549936:1:exon
so has part: feature:1551134-1551210:1:exon
so has part: feature:1551613-1551791:1:exon
so has part: feature:1552592-1553678:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1483413-1483464:1:exon

position:1483464:1
position: 1483464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1521052-1521194:1:exon

position:1521052:1
position: 1521052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1521194:1
position: 1521194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1521498-1521583:1:exon

position:1521498:1
position: 1521498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1521583:1
position: 1521583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1528956-1529064:1:exon

position:1528956:1
position: 1528956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1529064:1
position: 1529064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1534266-1534399:1:exon

position:1534266:1
position: 1534266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1534399:1
position: 1534399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1538396-1538567:1:exon

position:1538396:1
position: 1538396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1538567:1
position: 1538567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1541580-1541768:1:exon

position:1541580:1
position: 1541580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1541768:1
position: 1541768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1547467-1547599:1:exon

position:1547467:1
position: 1547467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1547599:1
position: 1547599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1547686-1547783:1:exon

position:1547686:1
position: 1547686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1547783:1
position: 1547783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1549817-1549936:1:exon

position:1549817:1
position: 1549817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1549936:1
position: 1549936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1551134-1551210:1:exon

position:1551134:1
position: 1551134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1551210:1
position: 1551210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1551613-1551791:1:exon

position:1551613:1
position: 1551613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1551791:1
position: 1551791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1552592-1553678:1:exon

position:1552592:1
position: 1552592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PKNOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PKNOX2
product: PBX/knotted 1 homeobox 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030464784.1
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
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position:1504423:1
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type: ForwardStrandPosition
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urn:…
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position:1504461:1
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reference: sequence
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urn:…
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PKNOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PKNOX2
product: PBX/knotted 1 homeobox 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464780.1
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
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location: region:1504446-1553678:1
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position:1504446:1
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urn:…
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urn:…
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position:1519847:1
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reference: sequence
type: ForwardStrandPosition
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position:1519980:1
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PKNOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PKNOX2
product: PBX/knotted 1 homeobox 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464781.1
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
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location: region:1515311-1553678:1
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position:1515311:1
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SIO_000300: 1
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position:1515325:1
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PKNOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PKNOX2
product: PBX/knotted 1 homeobox 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030464785.1
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
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location: region:1517051-1553678:1
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PKNOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PKNOX2
product: PBX/knotted 1 homeobox 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030464786.1
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
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urn:…
SIO_000300: 1
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PKNOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PKNOX2
product: PBX/knotted 1 homeobox 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030464779.1
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: join(1517051..1517104,1519847..1519980,1521052..1521194,1521498..1521583,1528956..1529064,1534266..1534399,1538396..1538567,1541580..1541768,1547467..1547599,1547686..1547783,1549817..1549936,1551134..1551210,1551613..1551791,1552592..1553678)
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urn:…
SIO_000300: 1
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urn:…
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PKNOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PKNOX2
product: PBX/knotted 1 homeobox 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030464783.1
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: join(1517055..1517104,1521052..1521194,1521498..1521583,1528956..1529064,1534266..1534399,1538396..1538567,1541580..1541768,1547467..1547599,1547686..1547783,1549817..1549936,1551134..1551210,1551613..1551791,1552592..1553678)
location: region:1517055-1553678:1
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position:1517055:1
position: 1517055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
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urn:…
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urn:…
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urn:…
SIO_000300: 13
SIO_000628: feature:1552592-1553678:1:exon

PKNOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PKNOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein PKNOX2
translation: MHHVSPAPALTMMATQTVPPPPYQDTPQMTATTQQPTKAQPVHLPTSATTAPVPAAAGDHQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDLGGPYSPNPSSITLHPQEMLQSSPAALPPASNPPPGIVVPAAALTPGNLAMSSGSGSPAVPGGALYQPVTMVTSQGQVLAQAIAPGTLQIPNTQVNLDITSLLDGEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAPKTKKIKSQHRPTQRFWPNSIAAGVLQQQGGNSGTNPDGSLSVDNLQPLSSATATIAMQQAMLVAHDDSLDGTEEEEEEEEEEEEEEEMEEEEEEEELQEEPGGLPAAPGADLGLDHSDSLE
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: join(1528981..1529064,1534266..1534399,1538396..1538567,1541580..1541768,1547467..1547599,1547686..1547783,1549817..1549936,1551134..1551210,1551613..1551791,1552592..1552845)
location: region:1528981-1552845:1
so has part: feature:1528981-1529064:1:exon
so has part: feature:1534266-1534399:1:exon
so has part: feature:1538396-1538567:1:exon
so has part: feature:1541580-1541768:1:exon
so has part: feature:1547467-1547599:1:exon
so has part: feature:1547686-1547783:1:exon
so has part: feature:1549817-1549936:1:exon
so has part: feature:1551134-1551210:1:exon
so has part: feature:1551613-1551791:1:exon
so has part: feature:1552592-1552845:1:exon

XP_030320639.1
type: Protein
SIO_000068: ncbiprotein

position:1528981:1
position: 1528981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1552845:1
position: 1552845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1528981-1529064:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1534266-1534399:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1538396-1538567:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1541580-1541768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1547467-1547599:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1547686-1547783:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1549817-1549936:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1551134-1551210:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1551613-1551791:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1552592-1552845:1:exon

PKNOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PKNOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein PKNOX2
translation: MHHVSPAPALTMMATQTVPPPPYQDTPQMTATTQQPTKAQPVHLPTSATTAPVPAAAGDHQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDLGGPYSPNPSSITLHPQEMLQSSPAALPPASNPPPGIVVPAAALTPGNLAMSSGSGSPAVPGGALYQPVTMVTSQGQVLAQAIAPGTLQIPNTQVNLDITSLLDGEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAPKTKKIKSQHRPTQRFWPNSIAAGVLQQQGGNSGTNPDGSLSVDNLQPLSSATATIAMQQAMLVAHDDSLDGTEEEEEEEEEEEEEEEMEEEEEEEELQEEPGGLPAAPGADLGLDHSDSLE
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: join(1528981..1529064,1534266..1534399,1538396..1538567,1541580..1541768,1547467..1547599,1547686..1547783,1549817..1549936,1551134..1551210,1551613..1551791,1552592..1552845)
location: region:1528981-1552845:1
so has part: feature:1528981-1529064:1:exon
so has part: feature:1534266-1534399:1:exon
so has part: feature:1538396-1538567:1:exon
so has part: feature:1541580-1541768:1:exon
so has part: feature:1547467-1547599:1:exon
so has part: feature:1547686-1547783:1:exon
so has part: feature:1549817-1549936:1:exon
so has part: feature:1551134-1551210:1:exon
so has part: feature:1551613-1551791:1:exon
so has part: feature:1552592-1552845:1:exon

XP_030320640.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1528981-1529064:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1534266-1534399:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1538396-1538567:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1541580-1541768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1547467-1547599:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1547686-1547783:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1549817-1549936:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1551134-1551210:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1551613-1551791:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1552592-1552845:1:exon

PKNOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PKNOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein PKNOX2
translation: MHHVSPAPALTMMATQTVPPPPYQDTPQMTATTQQPTKAQPVHLPTSATTAPVPAAAGDHQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDLGGPYSPNPSSITLHPQEMLQSSPAALPPASNPPPGIVVPAAALTPGNLAMSSGSGSPAVPGGALYQPVTMVTSQGQVLAQAIAPGTLQIPNTQVNLDITSLLDGEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAPKTKKIKSQHRPTQRFWPNSIAAGVLQQQGGNSGTNPDGSLSVDNLQPLSSATATIAMQQAMLVAHDDSLDGTEEEEEEEEEEEEEEEMEEEEEEEELQEEPGGLPAAPGADLGLDHSDSLE
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: join(1528981..1529064,1534266..1534399,1538396..1538567,1541580..1541768,1547467..1547599,1547686..1547783,1549817..1549936,1551134..1551210,1551613..1551791,1552592..1552845)
location: region:1528981-1552845:1
so has part: feature:1528981-1529064:1:exon
so has part: feature:1534266-1534399:1:exon
so has part: feature:1538396-1538567:1:exon
so has part: feature:1541580-1541768:1:exon
so has part: feature:1547467-1547599:1:exon
so has part: feature:1547686-1547783:1:exon
so has part: feature:1549817-1549936:1:exon
so has part: feature:1551134-1551210:1:exon
so has part: feature:1551613-1551791:1:exon
so has part: feature:1552592-1552845:1:exon

XP_030320641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1528981-1529064:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1534266-1534399:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1538396-1538567:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1541580-1541768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1547467-1547599:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1547686-1547783:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1549817-1549936:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1551134-1551210:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1551613-1551791:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1552592-1552845:1:exon

PKNOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PKNOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein PKNOX2
translation: MHHVSPAPALTMMATQTVPPPPYQDTPQMTATTQQPTKAQPVHLPTSATTAPVPAAAGDHQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDLGGPYSPNPSSITLHPQEMLQSSPAALPPASNPPPGIVVPAAALTPGNLAMSSGSGSPAVPGGALYQPVTMVTSQGQVLAQAIAPGTLQIPNTQVNLDITSLLDGEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAPKTKKIKSQHRPTQRFWPNSIAAGVLQQQGGNSGTNPDGSLSVDNLQPLSSATATIAMQQAMLVAHDDSLDGTEEEEEEEEEEEEEEEMEEEEEEEELQEEPGGLPAAPGADLGLDHSDSLE
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: join(1528981..1529064,1534266..1534399,1538396..1538567,1541580..1541768,1547467..1547599,1547686..1547783,1549817..1549936,1551134..1551210,1551613..1551791,1552592..1552845)
location: region:1528981-1552845:1
so has part: feature:1528981-1529064:1:exon
so has part: feature:1534266-1534399:1:exon
so has part: feature:1538396-1538567:1:exon
so has part: feature:1541580-1541768:1:exon
so has part: feature:1547467-1547599:1:exon
so has part: feature:1547686-1547783:1:exon
so has part: feature:1549817-1549936:1:exon
so has part: feature:1551134-1551210:1:exon
so has part: feature:1551613-1551791:1:exon
so has part: feature:1552592-1552845:1:exon

XP_030320642.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1528981-1529064:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1534266-1534399:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1538396-1538567:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1541580-1541768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1547467-1547599:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1547686-1547783:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1549817-1549936:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1551134-1551210:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1551613-1551791:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1552592-1552845:1:exon

PKNOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PKNOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein PKNOX2
translation: MHHVSPAPALTMMATQTVPPPPYQDTPQMTATTQQPTKAQPVHLPTSATTAPVPAAAGDHQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDLGGPYSPNPSSITLHPQEMLQSSPAALPPASNPPPGIVVPAAALTPGNLAMSSGSGSPAVPGGALYQPVTMVTSQGQVLAQAIAPGTLQIPNTQVNLDITSLLDGEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAPKTKKIKSQHRPTQRFWPNSIAAGVLQQQGGNSGTNPDGSLSVDNLQPLSSATATIAMQQAMLVAHDDSLDGTEEEEEEEEEEEEEEEMEEEEEEEELQEEPGGLPAAPGADLGLDHSDSLE
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: join(1528981..1529064,1534266..1534399,1538396..1538567,1541580..1541768,1547467..1547599,1547686..1547783,1549817..1549936,1551134..1551210,1551613..1551791,1552592..1552845)
location: region:1528981-1552845:1
so has part: feature:1528981-1529064:1:exon
so has part: feature:1534266-1534399:1:exon
so has part: feature:1538396-1538567:1:exon
so has part: feature:1541580-1541768:1:exon
so has part: feature:1547467-1547599:1:exon
so has part: feature:1547686-1547783:1:exon
so has part: feature:1549817-1549936:1:exon
so has part: feature:1551134-1551210:1:exon
so has part: feature:1551613-1551791:1:exon
so has part: feature:1552592-1552845:1:exon

XP_030320643.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1528981-1529064:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1534266-1534399:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1538396-1538567:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1541580-1541768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1547467-1547599:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1547686-1547783:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1549817-1549936:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1551134-1551210:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1551613-1551791:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1552592-1552845:1:exon

PKNOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PKNOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein PKNOX2
translation: MHHVSPAPALTMMATQTVPPPPYQDTPQMTATTQQPTKAQPVHLPTSATTAPVPAAAGDHQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDLGGPYSPNPSSITLHPQEMLQSSPAALPPASNPPPGIVVPAAALTPGNLAMSSGSGSPAVPGGALYQPVTMVTSQGQVLAQAIAPGTLQIPNTQVNLDITSLLDGEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAPKTKKIKSQHRPTQRFWPNSIAAGVLQQQGGNSGTNPDGSLSVDNLQPLSSATATIAMQQAMLVAHDDSLDGTEEEEEEEEEEEEEEEMEEEEEEEELQEEPGGLPAAPGADLGLDHSDSLE
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: join(1528981..1529064,1534266..1534399,1538396..1538567,1541580..1541768,1547467..1547599,1547686..1547783,1549817..1549936,1551134..1551210,1551613..1551791,1552592..1552845)
location: region:1528981-1552845:1
so has part: feature:1528981-1529064:1:exon
so has part: feature:1534266-1534399:1:exon
so has part: feature:1538396-1538567:1:exon
so has part: feature:1541580-1541768:1:exon
so has part: feature:1547467-1547599:1:exon
so has part: feature:1547686-1547783:1:exon
so has part: feature:1549817-1549936:1:exon
so has part: feature:1551134-1551210:1:exon
so has part: feature:1551613-1551791:1:exon
so has part: feature:1552592-1552845:1:exon

XP_030320644.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1528981-1529064:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1534266-1534399:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1538396-1538567:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1541580-1541768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1547467-1547599:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1547686-1547783:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1549817-1549936:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1551134-1551210:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1551613-1551791:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1552592-1552845:1:exon

PKNOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PKNOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein PKNOX2
translation: MHHVSPAPALTMMATQTVPPPPYQDTPQMTATTQQPTKAQPVHLPTSATTAPVPAAAGDHQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDLGGPYSPNPSSITLHPQEMLQSSPAALPPASNPPPGIVVPAAALTPGNLAMSSGSGSPAVPGGALYQPVTMVTSQGQVLAQAIAPGTLQIPNTQVNLDITSLLDGEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAPKTKKIKSQHRPTQRFWPNSIAAGVLQQQGGNSGTNPDGSLSVDNLQPLSSATATIAMQQAMLVAHDDSLDGTEEEEEEEEEEEEEEEMEEEEEEEELQEEPGGLPAAPGADLGLDHSDSLE
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: join(1528981..1529064,1534266..1534399,1538396..1538567,1541580..1541768,1547467..1547599,1547686..1547783,1549817..1549936,1551134..1551210,1551613..1551791,1552592..1552845)
location: region:1528981-1552845:1
so has part: feature:1528981-1529064:1:exon
so has part: feature:1534266-1534399:1:exon
so has part: feature:1538396-1538567:1:exon
so has part: feature:1541580-1541768:1:exon
so has part: feature:1547467-1547599:1:exon
so has part: feature:1547686-1547783:1:exon
so has part: feature:1549817-1549936:1:exon
so has part: feature:1551134-1551210:1:exon
so has part: feature:1551613-1551791:1:exon
so has part: feature:1552592-1552845:1:exon

XP_030320645.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1528981-1529064:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1534266-1534399:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1538396-1538567:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1541580-1541768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1547467-1547599:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1547686-1547783:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1549817-1549936:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1551134-1551210:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1551613-1551791:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1552592-1552845:1:exon

PKNOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PKNOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein PKNOX2
translation: MHHVSPAPALTMMATQTVPPPPYQDTPQMTATTQQPTKAQPVHLPTSATTAPVPAAAGDHQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDLGGPYSPNPSSITLHPQEMLQSSPAALPPASNPPPGIVVPAAALTPGNLAMSSGSGSPAVPGGALYQPVTMVTSQGQVLAQAIAPGTLQIPNTQVNLDITSLLDGEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAPKTKKIKSQHRPTQRFWPNSIAAGVLQQQGGNSGTNPDGSLSVDNLQPLSSATATIAMQQAMLVAHDDSLDGTEEEEEEEEEEEEEEEMEEEEEEEELQEEPGGLPAAPGADLGLDHSDSLE
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: join(1528981..1529064,1534266..1534399,1538396..1538567,1541580..1541768,1547467..1547599,1547686..1547783,1549817..1549936,1551134..1551210,1551613..1551791,1552592..1552845)
location: region:1528981-1552845:1
so has part: feature:1528981-1529064:1:exon
so has part: feature:1534266-1534399:1:exon
so has part: feature:1538396-1538567:1:exon
so has part: feature:1541580-1541768:1:exon
so has part: feature:1547467-1547599:1:exon
so has part: feature:1547686-1547783:1:exon
so has part: feature:1549817-1549936:1:exon
so has part: feature:1551134-1551210:1:exon
so has part: feature:1551613-1551791:1:exon
so has part: feature:1552592-1552845:1:exon

XP_030320646.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1528981-1529064:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1534266-1534399:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1538396-1538567:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1541580-1541768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1547467-1547599:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1547686-1547783:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1549817-1549936:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1551134-1551210:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1551613-1551791:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1552592-1552845:1:exon

FEZ1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: FEZ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1555242..1567479)
location: region:1555242-1567479:-1
so has part: feature:1555242-1567479:-1:exon
subclass of: SO_0000010

103532715
type: Gene
SIO_000068: ncbigene

position:1555242:-1
position: 1555242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1567479:-1
position: 1567479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1555242-1567479:-1:exon

FEZ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FEZ1
product: fasciculation and elongation protein zeta 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 7 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030464747.1
SIO_010081: FEZ1
subclass of: SO_0000673
so part of: FEZ1
location: complement(join(1555242..1555437,1556574..1556639,1557082..1557157,1557475..1557555,1557942..1558213,1560471..1560660,1561554..1561649,1562824..1562920,1565003..1565305,1567369..1567479))
location: region:1555242-1567479:-1
so has part: feature:1567369-1567479:-1:exon
so has part: feature:1565003-1565305:-1:exon
so has part: feature:1562824-1562920:-1:exon
so has part: feature:1561554-1561649:-1:exon
so has part: feature:1560471-1560660:-1:exon
so has part: feature:1557942-1558213:-1:exon
so has part: feature:1557475-1557555:-1:exon
so has part: feature:1557082-1557157:-1:exon
so has part: feature:1556574-1556639:-1:exon
so has part: feature:1555242-1555437:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1567369-1567479:-1:exon

position:1567369:-1
position: 1567369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1565003-1565305:-1:exon

position:1565003:-1
position: 1565003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1565305:-1
position: 1565305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1562824-1562920:-1:exon

position:1562824:-1
position: 1562824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1562920:-1
position: 1562920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1561554-1561649:-1:exon