Calypte anna isolate BGI_N300 chromosome 23, bCalAnn1_v1.p, whole genome shotgun sequence.
type: Entry
definition: Calypte anna isolate BGI_N300 chromosome 23, bCalAnn1_v1.p, whole genome shotgun sequence.
sequence version: NC_044268.1
sequence date: 2019-08-24
sequence: sequence
division: CON
label: NC_044268.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA558503
dblink: SAMN02265252
keyword: WGS
keyword: RefSeq
source: Calypte anna (Anna's hummingbird)
organism: Calypte anna
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Apodiformes; Trochilidae; Calypte.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM012135.1.\nAssembly name: bCalAnn1_v1.p\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2019/05/16. The original whole-genome shotgun project has the\naccession RRCD00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 26-SEP-2018\nAssembly Method :: FALCON v. 5.1.1; FALCON unzip v. 1.0.2;\n scaff10X v. git 4.28.2018; Bionano Solve\n DLS v. 3.2.1; Salsa2 HiC v. 2.0;\n smrtanalysis Arrow polishing & gap\n filling v. 5.1.0.26412; longranger align\n v. 2.2.2; freebayes v. 1.2.0;\n purge_haplotigs v. bit 7.10.2018; gEVAL\n manual curation v. 2018-09-07\nAssembly Name :: bCalAnn1_v1.p\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 54.0x\nSequencing Technology :: PacBio RSII; 10X Genomics linked reads;\n Bionano Genomics DLS; Arima Genomics HiC\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Calypte anna Annotation Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 6423903
topology: linear
so has quality: SO_0000987
location: 1..6423903
location: region:1-6423903:1
RO_0002162: 9244

NC_044268
type: RefSeq
SIO_000068: refseq

PRJNA558503
type: BioProject
SIO_000068: bioproject

SAMN02265252
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6423903:1
position: 6423903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-6423903:1:source
so part of: sequence
organism: Calypte anna
mol type: genomic DNA
isolate: BGI_N300
chromosome: 23
sex: female
country: USA

9244
type: Taxonomy
SIO_000068: taxonomy

LOC115599589
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599589
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(118871..120993)
location: region:118871-120993:-1
so has part: feature:118871-120993:-1:exon
subclass of: SO_0000011

115599589
type: Gene
SIO_000068: ncbigene

position:118871:-1
position: 118871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120993:-1
position: 120993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118871-120993:-1:exon

LOC115599589
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599589
product: uncharacterized LOC115599589
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988516.1
SIO_010081: LOC115599589
subclass of: SO_0000673
so part of: LOC115599589
location: complement(join(118871..118951,120121..120348,120970..120993))
location: region:118871-120993:-1
so has part: feature:120970-120993:-1:exon
so has part: feature:120121-120348:-1:exon
so has part: feature:118871-118951:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:120970-120993:-1:exon

position:120970:-1
position: 120970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:120121-120348:-1:exon

position:120121:-1
position: 120121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120348:-1
position: 120348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:118871-118951:-1:exon

position:118951:-1
position: 118951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103532689
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103532689
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(170135..175735)
location: region:170135-175735:-1
so has part: feature:170135-175735:-1:exon
subclass of: SO_0000010

103532689
type: Gene
SIO_000068: ncbigene

position:170135:-1
position: 170135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175735:-1
position: 175735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170135-175735:-1:exon

LOC103532689
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103532689
product: endothelin-2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030464394.1
SIO_010081: LOC103532689
subclass of: SO_0000673
so part of: LOC103532689
location: complement(join(170135..172256,173011..173103,173823..173942,175101..175251,175622..175735))
location: region:170135-175735:-1
so has part: feature:175622-175735:-1:exon
so has part: feature:175101-175251:-1:exon
so has part: feature:173823-173942:-1:exon
so has part: feature:173011-173103:-1:exon
so has part: feature:170135-172256:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:175622-175735:-1:exon

position:175622:-1
position: 175622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:175101-175251:-1:exon

position:175101:-1
position: 175101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175251:-1
position: 175251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:173823-173942:-1:exon

position:173823:-1
position: 173823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173942:-1
position: 173942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:173011-173103:-1:exon

position:173011:-1
position: 173011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173103:-1
position: 173103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:170135-172256:-1:exon

position:172256:-1
position: 172256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103532689
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103532689
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endothelin-2
translation: MPSHPAALLLLACALCALLGDGMGSPPPPLGSLLAAASAEHPRTKRCSCNSWMDKECIYFCHLDIIWVNTPGHTAPYGLGSPPRRRKRSLSRCQCSHSRDSICATFCQVKPGYLQSLKQPMNSGASVEPPQRPSHHSLLRALRGLAVSSLLLSKHQHRSQRSAQPVLPWKKNIWKKKR
SIO_010081: LOC103532689
subclass of: SO_0000673
so part of: LOC103532689
location: complement(join(172148..172256,173011..173103,173823..173942,175101..175251,175622..175685))
location: region:172148-175685:-1
so has part: feature:175622-175685:-1:exon
so has part: feature:175101-175251:-1:exon
so has part: feature:173823-173942:-1:exon
so has part: feature:173011-173103:-1:exon
so has part: feature:172148-172256:-1:exon

XP_030320254.1
type: Protein
SIO_000068: ncbiprotein

position:172148:-1
position: 172148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175685:-1
position: 175685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175622-175685:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:175101-175251:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:173823-173942:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:173011-173103:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:172148-172256:-1:exon

HIVEP3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: HIVEP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(212991..265827)
location: region:212991-265827:-1
so has part: feature:212991-265827:-1:exon
subclass of: SO_0000010

103532673
type: Gene
SIO_000068: ncbigene

position:212991:-1
position: 212991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265827:-1
position: 265827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212991-265827:-1:exon

HIVEP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: HIVEP3
product: HIVEP zinc finger 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 1 long SRA read, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030464446.1
SIO_010081: HIVEP3
subclass of: SO_0000673
so part of: HIVEP3
location: complement(join(212991..214324,217076..218136,225193..225291,231181..231356,256365..256510,260590..265827))
location: region:212991-265827:-1
so has part: feature:260590-265827:-1:exon
so has part: feature:256365-256510:-1:exon
so has part: feature:231181-231356:-1:exon
so has part: feature:225193-225291:-1:exon
so has part: feature:217076-218136:-1:exon
so has part: feature:212991-214324:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:260590-265827:-1:exon

position:260590:-1
position: 260590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:256365-256510:-1:exon

position:256365:-1
position: 256365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256510:-1
position: 256510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:231181-231356:-1:exon

position:231181:-1
position: 231181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231356:-1
position: 231356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:225193-225291:-1:exon

position:225193:-1
position: 225193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225291:-1
position: 225291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:217076-218136:-1:exon

position:217076:-1
position: 217076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218136:-1
position: 218136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:212991-214324:-1:exon

position:214324:-1
position: 214324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HIVEP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: HIVEP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor HIVEP3
translation: MDPEQSQKSTKKAEESPRKRLPKGEAFQANISSTATYQGSSAPSQGTPLRDPVPQQHFSGSLAIPREESQEKTGHQKQPKPSSFEHPPHVSQLQQHALSPAFMSPGKPEHVLESPTWQLVDPVRPGPSGSFSSPGLHSHHGQLLPSHSQIIPGEDMPAVQKVYIPRPSQVSLKQAEEVHKKEKKPQKPGKYICQYCSRPCAKPSVLQKHIRSHTGERPYPCIPCGFSFKTKSNLYKHRKSHAHRIKAGLASGIGAEMYPSSLEMERIGGEDFEEPTEGESTDSEEETGAMGHPVELSPRQKHTLLSSSLLSGGSQGSSHDRCSLSHSSMSQSLEDSTQFAEPSSDHALSHKSEDTHTIKQKLALRLSERKKIIDEQAFLSPGSKGSTESGYFSRSESAEQQISPPNTNAKSYAEIIFGKCGRIGQRTAALAANTTQGLPHLSTEEKPSMVPLSVPRTQVIEHITKLITINEAVVDTSEIDSVKPRRSSLSRRSSIESPKSGVYREPFQFDIKSGSSSQLDASKVLTSHGEKMKPEQSLLSLQQSHSATETVPLLRSHSMPSAACTISSPHTFRGSYSFDDHIMEPEVLSRSQAFSSHPRMLKRQPAIELPLGVEYVSEEVSSANKETVPKPPEEPETKESDLTKKSRKGPKVKGFMYECNVCGARYKKRDNYEAHKKYYCSELQLSKPRSSTSHTSSETEKSVADPDTWPQMMHYKLGSSLELTPLRKRRKEKSLGDDEEPPAFELSDTPSSSTGPGTQFANPASSDVALNLTRESIKSSADPGKSAPSDVSASFHSRNTKPAASTEGKERRTTSKEISVIQHTSSFEKSDSIEQVSSLEAEDKPLSQYPSQPTPQHSRPSHSLQPKLVRQPNIQVPEILVTEEPDRPETEPEPPPKEPEKTDEFQWPQRSQTLSQLPAEKLPPKKKRLRLAEMAQSSGESSFESVSLTRSPSQESSVSHSSSHSVSFDREDHSKSESTSQPSETHPKPPGVGSHMLMVPSHHHHHSREMRRSASEQTPNVSHPSQMSETRSKSFDYGSLSSTPASSPGPSASSAPQERRKCFLVRQASLTRHPEHEPDSAPTVRPEAEDTAPSSSKSPSTSLPHQPTSSSPLPSHGTYPSEKSQPKDSPPPAYTQPYTEALQVFHHPIPQLTLHEKQFMSPQVSIFPYQHLLPQPGQSAELFAAHTMSEILSAQFTMPQIPPSIFQAPPLPLPQTLIHPAPLHLAPPLMSHPAEVPFRHPSFLPVHYPGSSPIPSAFFLPLQSQFALQLPGEAGHLPQIKSSLFSAAGTSSLSPCTEYSSDSRLHPLTRTTSPSVSISTSQLLVPTRSDPVVSLVVPVRIQTNMPSYGTAMYTTLSQILVTQSQCSSSSIVLPKFDDHQPKGTLVCSADVPGLGFDLAQVITEDQRSIFQSPYLRVPLPLPERKGYMPLTSPSDSVLGLEGGPSTVGGSKRMLSPAGSLELTMETQQQKRVKEEEVSEAEEKLEVVKPPSAVEEGKKQDKSHFLPESQGRVEVETPPSLSSEQSEPKETPSTLQQAVSHSGSPSFEAPDECKQPTGKQFLTKAPLQPVKKEDSKEPVEQSPPNPPSPAPLSEAARSAMKSREGTETKKVLQFPSLHTTTNVSWCYLNYIKPNHIQQADRRSSVYASWCISLYNPNLPGISTKAALSLLRSKQKVSKETYTMATAPRPEAGRLVPSSSRKPKMTEVHLPSLLSNEGRKDITRAEKEEDKRGKAEEEALVTKRGEPVRIKIFEGGYKSNEEYVYVRGRGRGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKYCNFAFKTKGNLTKHMKSKAHSKKCQEMGVLVSSLVDPEAEEGTSEDLFQDSEGREGSEPIEEHQFSDLEESDDDDDNEDEEDEEEEESQDEPPLKLPEGKNTTLLMHSSGGSPSSQEEGTDTALSLGQETLSSSQKVGEGQQASSSGLETKWSADSSDIAVCHSFLSLHRPALTSTEKLASAERESVTRPQMSLVK…
SIO_010081: HIVEP3
subclass of: SO_0000673
so part of: HIVEP3
location: complement(join(213428..214324,217076..218136,225193..225291,231181..231356,256365..256510,260590..265704))
location: region:213428-265704:-1
so has part: feature:260590-265704:-1:exon
so has part: feature:256365-256510:-1:exon
so has part: feature:231181-231356:-1:exon
so has part: feature:225193-225291:-1:exon
so has part: feature:217076-218136:-1:exon
so has part: feature:213428-214324:-1:exon

XP_030320306.1
type: Protein
SIO_000068: ncbiprotein

position:213428:-1
position: 213428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265704:-1
position: 265704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260590-265704:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:256365-256510:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:231181-231356:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:225193-225291:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:217076-218136:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:213428-214324:-1:exon

LOC115599579
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599579
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(265936..305230)
location: region:265936-305230:-1
so has part: feature:265936-305230:-1:exon
subclass of: SO_0000011

115599579
type: Gene
SIO_000068: ncbigene

position:265936:-1
position: 265936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305230:-1
position: 305230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265936-305230:-1:exon

LOC115599579
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599579
product: uncharacterized LOC115599579
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_003988510.1
SIO_010081: LOC115599579
subclass of: SO_0000673
so part of: LOC115599579
location: complement(join(265936..266250,267518..267583,285703..285797,303822..303916,305146..305230))
location: region:265936-305230:-1
so has part: feature:305146-305230:-1:exon
so has part: feature:303822-303916:-1:exon
so has part: feature:285703-285797:-1:exon
so has part: feature:267518-267583:-1:exon
so has part: feature:265936-266250:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:305146-305230:-1:exon

position:305146:-1
position: 305146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:303822-303916:-1:exon

position:303822:-1
position: 303822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303916:-1
position: 303916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:285703-285797:-1:exon

position:285703:-1
position: 285703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285797:-1
position: 285797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:267518-267583:-1:exon

position:267518:-1
position: 267518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267583:-1
position: 267583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:265936-266250:-1:exon

position:266250:-1
position: 266250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SERINC2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SERINC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(539220..549088)
location: region:539220-549088:-1
so has part: feature:539220-549088:-1:exon
subclass of: SO_0000010

103532672
type: Gene
SIO_000068: ncbigene

position:539220:-1
position: 539220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549088:-1
position: 549088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:539220-549088:-1:exon

SERINC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SERINC2
product: serine incorporator 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030464523.1
SIO_010081: SERINC2
subclass of: SO_0000673
so part of: SERINC2
location: complement(join(539220..539908,540423..540629,541464..541599,541712..541802,541887..542056,542151..542288,542450..542529,542633..542820,543623..543784,548978..549088))
location: region:539220-549088:-1
so has part: feature:548978-549088:-1:exon
so has part: feature:543623-543784:-1:exon
so has part: feature:542633-542820:-1:exon
so has part: feature:542450-542529:-1:exon
so has part: feature:542151-542288:-1:exon
so has part: feature:541887-542056:-1:exon
so has part: feature:541712-541802:-1:exon
so has part: feature:541464-541599:-1:exon
so has part: feature:540423-540629:-1:exon
so has part: feature:539220-539908:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:548978-549088:-1:exon

position:548978:-1
position: 548978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:543623-543784:-1:exon

position:543623:-1
position: 543623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543784:-1
position: 543784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:542633-542820:-1:exon

position:542633:-1
position: 542633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542820:-1
position: 542820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:542450-542529:-1:exon

position:542450:-1
position: 542450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542529:-1
position: 542529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:542151-542288:-1:exon

position:542151:-1
position: 542151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542288:-1
position: 542288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:541887-542056:-1:exon

position:541887:-1
position: 541887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542056:-1
position: 542056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:541712-541802:-1:exon

position:541712:-1
position: 541712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541802:-1
position: 541802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:541464-541599:-1:exon

position:541464:-1
position: 541464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541599:-1
position: 541599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:540423-540629:-1:exon

position:540423:-1
position: 540423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540629:-1
position: 540629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:539220-539908:-1:exon

position:539908:-1
position: 539908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SERINC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SERINC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine incorporator 2
translation: MGACLGVCSLLSCVSCLCGSAPCLLCGCCPSAKNSTISRLLFTFFLFLGTLVSIIMIIPGVEKELHKLPGFCEGTGSVLGVQTHVDCSSFLGHKAVYRMGFSMASFFFLFAVLMVCVRSSKDPRAALQNGFWFFKFLVLVGITVGAFYIPDGAFTSVWFYFGVVGSFLFILIQLILLIDFAHSWSQLWLRNASESNAKGWYAALCIVTFIFYAASIVAVVLLYVYYTKPQGCTEGKVLISINLILCLIVSAVSILPKIQDAQPHSGLLQASLITLYTIYVTWSALANVPTQTCNPTLLVRNSTSSVMANQPLTTWWDAPSIIGLIIFILCTLFISLRSSDHPQVNKLMLTEERRAGGEEGAVEEGLHRAYDNEQDGVTYNYTFFHLCLLLAALYIMMTLTNWYRPDESLQVLRSPWTAVWVKICSSWAGLLLYLWTLVAPLVLPDRDFS
SIO_010081: SERINC2
subclass of: SO_0000673
so part of: SERINC2
location: complement(join(539770..539908,540423..540629,541464..541599,541712..541802,541887..542056,542151..542288,542450..542529,542633..542820,543623..543784,548978..549016))
location: region:539770-549016:-1
so has part: feature:548978-549016:-1:exon
so has part: feature:543623-543784:-1:exon
so has part: feature:542633-542820:-1:exon
so has part: feature:542450-542529:-1:exon
so has part: feature:542151-542288:-1:exon
so has part: feature:541887-542056:-1:exon
so has part: feature:541712-541802:-1:exon
so has part: feature:541464-541599:-1:exon
so has part: feature:540423-540629:-1:exon
so has part: feature:539770-539908:-1:exon

XP_030320383.1
type: Protein
SIO_000068: ncbiprotein

position:539770:-1
position: 539770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549016:-1
position: 549016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548978-549016:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:543623-543784:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:542633-542820:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:542450-542529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:542151-542288:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:541887-542056:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:541712-541802:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:541464-541599:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:540423-540629:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:539770-539908:-1:exon

LOC115599584
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599584
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 558563..566731
location: region:558563-566731:1
so has part: feature:558563-566731:1:exon
subclass of: SO_0000010

115599584
type: Gene
SIO_000068: ncbigene

position:558563:1
position: 558563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566731:1
position: 566731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558563-566731:1:exon

LOC115599584
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC115599584
product: cAMP-dependent protein kinase inhibitor alpha-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 87% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464498.1
SIO_010081: LOC115599584
subclass of: SO_0000673
so part of: LOC115599584
location: join(558563..558599,565295..565378,566269..566420,566514..566731)
location: region:558563-566731:1
so has part: feature:558563-558599:1:exon
so has part: feature:565295-565378:1:exon
so has part: feature:566269-566420:1:exon
so has part: feature:566514-566731:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:558563-558599:1:exon

position:558599:1
position: 558599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:565295-565378:1:exon

position:565295:1
position: 565295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565378:1
position: 565378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:566269-566420:1:exon

position:566269:1
position: 566269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566420:1
position: 566420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:566514-566731:1:exon

position:566514:1
position: 566514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115599584
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC115599584
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: cAMP-dependent protein kinase inhibitor alpha-like
translation: MTEVEPVLDFASSGRTGRRNALPDILGSPAGVNPSDLPLKLAEMSLSAGSAQELQSPSAECPPPQPPSPELKDTS
SIO_010081: LOC115599584
subclass of: SO_0000673
so part of: LOC115599584
location: join(566276..566420,566514..566597)
location: region:566276-566597:1
so has part: feature:566276-566420:1:exon
so has part: feature:566514-566597:1:exon

XP_030320358.1
type: Protein
SIO_000068: ncbiprotein

position:566276:1
position: 566276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566597:1
position: 566597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:566276-566420:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:566514-566597:1:exon

FABP3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: FABP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 569793..573589
location: region:569793-573589:1
so has part: feature:569793-573589:1:exon
subclass of: SO_0000010

103532671
type: Gene
SIO_000068: ncbigene

position:569793:1
position: 569793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573589:1
position: 573589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569793-573589:1:exon

FABP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FABP3
product: fatty acid binding protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 1 EST, 1 long SRA read, 51 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_008498458.2
SIO_010081: FABP3
subclass of: SO_0000673
so part of: FABP3
location: join(569793..569985,570698..570870,573076..573177,573307..573589)
location: region:569793-573589:1
so has part: feature:569793-569985:1:exon
so has part: feature:570698-570870:1:exon
so has part: feature:573076-573177:1:exon
so has part: feature:573307-573589:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:569793-569985:1:exon

position:569985:1
position: 569985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:570698-570870:1:exon

position:570698:1
position: 570698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570870:1
position: 570870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:573076-573177:1:exon

position:573076:1
position: 573076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573177:1
position: 573177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:573307-573589:1:exon

position:573307:1
position: 573307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FABP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FABP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fatty acid-binding protein, heart
translation: MVDAFVGTWKMVDTANFDEYMKALGVGFATRQVAAFTKPTTIIEVAGDKITLKTQSTFKNTEISFKLGEEFDETTADDRHVKSLVTLDGGKLIHVQKWDGKETSLVRELKDGKLILTLTMGNVVSTRTYEKET
SIO_010081: FABP3
subclass of: SO_0000673
so part of: FABP3
location: join(569913..569985,570698..570870,573076..573177,573307..573360)
location: region:569913-573360:1
so has part: feature:569913-569985:1:exon
so has part: feature:570698-570870:1:exon
so has part: feature:573076-573177:1:exon
so has part: feature:573307-573360:1:exon

XP_008496680.1
type: Protein
SIO_000068: ncbiprotein

position:569913:1
position: 569913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573360:1
position: 573360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569913-569985:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:570698-570870:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:573076-573177:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:573307-573360:1:exon

ZCCHC17
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ZCCHC17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(573536..583334)
location: region:573536-583334:-1
so has part: feature:573536-583334:-1:exon
subclass of: SO_0000010

103537571
type: Gene
SIO_000068: ncbigene

position:573536:-1
position: 573536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583334:-1
position: 583334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:573536-583334:-1:exon

ZCCHC17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ZCCHC17
product: zinc finger CCHC-type containing 17, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_030464200.1
SIO_010081: ZCCHC17
subclass of: SO_0000673
so part of: ZCCHC17
location: complement(join(573536..575186,578213..578361,579884..579984,581090..581181,581456..581556,581865..581922,583045..583334))
location: region:573536-583334:-1
so has part: feature:583045-583334:-1:exon
so has part: feature:581865-581922:-1:exon
so has part: feature:581456-581556:-1:exon
so has part: feature:581090-581181:-1:exon
so has part: feature:579884-579984:-1:exon
so has part: feature:578213-578361:-1:exon
so has part: feature:573536-575186:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:583045-583334:-1:exon

position:583045:-1
position: 583045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:581865-581922:-1:exon

position:581865:-1
position: 581865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581922:-1
position: 581922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:581456-581556:-1:exon

position:581456:-1
position: 581456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581556:-1
position: 581556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:581090-581181:-1:exon

position:581090:-1
position: 581090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581181:-1
position: 581181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:579884-579984:-1:exon

position:579884:-1
position: 579884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579984:-1
position: 579984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:578213-578361:-1:exon

position:578213:-1
position: 578213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578361:-1
position: 578361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:573536-575186:-1:exon

position:575186:-1
position: 575186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZCCHC17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ZCCHC17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar protein of 40 kDa isoform X1
translation: MEPLPELYAVFQGEVAAVTEYGAFIKIPGCRKQGLVHRTHMSSCRVDKPSEIVDVGDKVWVKLIGKEMKDDKLKLSLSMKVVNQGTGKDLDPNNVSLDQDERKKRPFRDFTSQKITLEAVLNTVCKKCGCKGHFTKECFMQPGGTKYSLIPEEEEEEVAAGGCERDKKTSVADESSKKRKKEKKKKKHRNKQSSESASESSDSESDGDQPGSKRTKHVGKPSKAQKKKKKKKKHKKKPRD
SIO_010081: ZCCHC17
subclass of: SO_0000673
so part of: ZCCHC17
location: complement(join(575007..575186,578213..578361,579884..579984,581090..581181,581456..581556,581865..581922,583045..583086))
location: region:575007-583086:-1
so has part: feature:583045-583086:-1:exon
so has part: feature:581865-581922:-1:exon
so has part: feature:581456-581556:-1:exon
so has part: feature:581090-581181:-1:exon
so has part: feature:579884-579984:-1:exon
so has part: feature:578213-578361:-1:exon
so has part: feature:575007-575186:-1:exon

XP_030320060.1
type: Protein
SIO_000068: ncbiprotein

position:575007:-1
position: 575007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583086:-1
position: 583086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583045-583086:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:581865-581922:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581456-581556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:581090-581181:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:579884-579984:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:578213-578361:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:575007-575186:-1:exon

ZCCHC17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ZCCHC17
product: zinc finger CCHC-type containing 17, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464201.1
SIO_010081: ZCCHC17
subclass of: SO_0000673
so part of: ZCCHC17
location: complement(join(575069..575183,578206..578361,579884..579984,581090..581181,581456..581556,581865..581922,583045..583333))
location: region:575069-583333:-1
so has part: feature:583045-583333:-1:exon
so has part: feature:581865-581922:-1:exon
so has part: feature:581456-581556:-1:exon
so has part: feature:581090-581181:-1:exon
so has part: feature:579884-579984:-1:exon
so has part: feature:578206-578361:-1:exon
so has part: feature:575069-575183:-1:exon

position:575069:-1
position: 575069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583333:-1
position: 583333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583045-583333:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:581865-581922:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581456-581556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:581090-581181:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:579884-579984:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:578206-578361:-1:exon

position:578206:-1
position: 578206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:575069-575183:-1:exon

position:575183:-1
position: 575183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZCCHC17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ZCCHC17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar protein of 40 kDa isoform X2
translation: MEPLPELYAVFQGEVAAVTEYGAFIKIPGCRKQGLVHRTHMSSCRVDKPSEIVDVGDKVWVKLIGKEMKDDKLKLSLSMKVVNQGTGKDLDPNNVSLDQDERKKRPFRDFTSQKITLEAVLNTVCKKCGCKGHFTKECFMQPGGTKYSLIPEEEEEEVAAGGCERDKKTSVADESSKKRKKVQKEEKEAQE
SIO_010081: ZCCHC17
subclass of: SO_0000673
so part of: ZCCHC17
location: complement(join(575158..575183,578206..578361,579884..579984,581090..581181,581456..581556,581865..581922,583045..583086))
location: region:575158-583086:-1
so has part: feature:583045-583086:-1:exon
so has part: feature:581865-581922:-1:exon
so has part: feature:581456-581556:-1:exon
so has part: feature:581090-581181:-1:exon
so has part: feature:579884-579984:-1:exon
so has part: feature:578206-578361:-1:exon
so has part: feature:575158-575183:-1:exon

XP_030320061.1
type: Protein
SIO_000068: ncbiprotein

position:575158:-1
position: 575158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583045-583086:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:581865-581922:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581456-581556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:581090-581181:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:579884-579984:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:578206-578361:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:575158-575183:-1:exon

SNRNP40
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SNRNP40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 583569..596717
location: region:583569-596717:1
so has part: feature:583569-596717:1:exon
subclass of: SO_0000010

103532687
type: Gene
SIO_000068: ncbigene

position:583569:1
position: 583569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596717:1
position: 596717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583569-596717:1:exon

SNRNP40
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SNRNP40
product: small nuclear ribonucleoprotein U5 subunit 40
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 4 ESTs, 3 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030464199.1
SIO_010081: SNRNP40
subclass of: SO_0000673
so part of: SNRNP40
location: join(583569..583786,584724..584853,585344..585437,586016..586181,587633..587755,588745..588865,589748..589830,590252..590313,593712..593815,596279..596717)
location: region:583569-596717:1
so has part: feature:583569-583786:1:exon
so has part: feature:584724-584853:1:exon
so has part: feature:585344-585437:1:exon
so has part: feature:586016-586181:1:exon
so has part: feature:587633-587755:1:exon
so has part: feature:588745-588865:1:exon
so has part: feature:589748-589830:1:exon
so has part: feature:590252-590313:1:exon
so has part: feature:593712-593815:1:exon
so has part: feature:596279-596717:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:583569-583786:1:exon

position:583786:1
position: 583786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:584724-584853:1:exon

position:584724:1
position: 584724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584853:1
position: 584853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:585344-585437:1:exon

position:585344:1
position: 585344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585437:1
position: 585437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:586016-586181:1:exon

position:586016:1
position: 586016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586181:1
position: 586181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:587633-587755:1:exon

position:587633:1
position: 587633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:587755:1
position: 587755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:588745-588865:1:exon

position:588745:1
position: 588745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:588865:1
position: 588865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:589748-589830:1:exon

position:589748:1
position: 589748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:589830:1
position: 589830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:590252-590313:1:exon

position:590252:1
position: 590252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:590313:1
position: 590313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:593712-593815:1:exon

position:593712:1
position: 593712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:593815:1
position: 593815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:596279-596717:1:exon

position:596279:1
position: 596279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SNRNP40
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SNRNP40
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein 40 kDa protein
translation: MIEQQKRKGPGGGTGTGTGTGTAPAAAPAAAPGPDLPLVPVPAKRPRHELPGAPGGGXGGGQPSGGTGPQTGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGNTLASAGFDRLILLWNVYGDCDNFATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNIHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEEPIILSASSDKRLYMGEIQ
SIO_010081: SNRNP40
subclass of: SO_0000673
so part of: SNRNP40
location: join(583576..583786,584724..584853,585344..585437,586016..586181,587633..587755,588745..588865,589748..589830,590252..590313,593712..593815,596279..596328)
location: region:583576-596328:1
so has part: feature:583576-583786:1:exon
so has part: feature:584724-584853:1:exon
so has part: feature:585344-585437:1:exon
so has part: feature:586016-586181:1:exon
so has part: feature:587633-587755:1:exon
so has part: feature:588745-588865:1:exon
so has part: feature:589748-589830:1:exon
so has part: feature:590252-590313:1:exon
so has part: feature:593712-593815:1:exon
so has part: feature:596279-596328:1:exon

XP_030320059.1
type: Protein
SIO_000068: ncbiprotein

position:583576:1
position: 583576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596328:1
position: 596328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583576-583786:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:584724-584853:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:585344-585437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:586016-586181:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:587633-587755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:588745-588865:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:589748-589830:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:590252-590313:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:593712-593815:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:596279-596328:1:exon

LOC103532686
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103532686
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 597456..607336
location: region:597456-607336:1
so has part: feature:597456-607336:1:exon
subclass of: SO_0000010

103532686
type: Gene
SIO_000068: ncbigene

position:597456:1
position: 597456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607336:1
position: 607336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597456-607336:1:exon

LOC103532686
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103532686
product: bone morphogenetic protein 8B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030464395.1
SIO_010081: LOC103532686
subclass of: SO_0000673
so part of: LOC103532686
location: join(597456..597882,602733..602925,603602..603750,604450..604644,605270..605349,605742..605852,607076..607336)
location: region:597456-607336:1
so has part: feature:597456-597882:1:exon
so has part: feature:602733-602925:1:exon
so has part: feature:603602-603750:1:exon
so has part: feature:604450-604644:1:exon
so has part: feature:605270-605349:1:exon
so has part: feature:605742-605852:1:exon
so has part: feature:607076-607336:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:597456-597882:1:exon

position:597882:1
position: 597882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:602733-602925:1:exon

position:602733:1
position: 602733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602925:1
position: 602925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:603602-603750:1:exon

position:603602:1
position: 603602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603750:1
position: 603750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:604450-604644:1:exon

position:604450:1
position: 604450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604644:1
position: 604644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:605270-605349:1:exon

position:605270:1
position: 605270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:605349:1
position: 605349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:605742-605852:1:exon

position:605742:1
position: 605742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:605852:1
position: 605852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:607076-607336:1:exon

position:607076:1
position: 607076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC103532686
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103532686
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bone morphogenetic protein 8B
translation: MGPGRGAAGGPLGALALLWVAAVLGQLGSGSLLLRRRIHTSGFLQRRLSGGERRDVQREILAVLGLPGRPRPRNHPAARAPSAAAPLFMLDLYHAVAGDEEVEDAEEEAAVSRPVLTGLSTQSPPPGSVVSHADTVVSLVNMVEQDRDIFSPKPYWKEFRFDLTQVPTGESVTAAEFRIYKARGVTRNPNTTLHLSIYEIAAEHSNRESDLFLLDVQDLRAGTEGWLVFDVTAASNHWLVDQKYNLGLRLYVETEDGHSVDPGSAGLLGRRGPRSKQPFMVTFFRASPSPVRVPRAAKPPRRRQPKKTNDLPHPNKLPGIFDDVHAADGRQVCRRHELYVSFQDLGWLDWVIAPQGYSAYYCEGECAFPLDSCMNATNHAILQSLVHLMKPEAVPKACCAPTKLSATSVLYYDSNNNVILKKHRNMVVKSCGCH
SIO_010081: LOC103532686
subclass of: SO_0000673
so part of: LOC103532686
location: join(597456..597882,602733..602925,603602..603750,604450..604644,605270..605349,605742..605852,607076..607225)
location: region:597456-607225:1
so has part: feature:597456-597882:1:exon
so has part: feature:602733-602925:1:exon
so has part: feature:603602-603750:1:exon
so has part: feature:604450-604644:1:exon
so has part: feature:605270-605349:1:exon
so has part: feature:605742-605852:1:exon
so has part: feature:607076-607225:1:exon

XP_030320255.1
type: Protein
SIO_000068: ncbiprotein

position:607225:1
position: 607225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597456-597882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:602733-602925:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:603602-603750:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:604450-604644:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:605270-605349:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:605742-605852:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:607076-607225:1:exon

PPIE
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PPIE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(608226..611854)
location: region:608226-611854:-1
so has part: feature:608226-611854:-1:exon
subclass of: SO_0000010

103532685
type: Gene
SIO_000068: ncbigene

position:608226:-1
position: 608226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611854:-1
position: 611854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:608226-611854:-1:exon

PPIE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PPIE
product: peptidylprolyl isomerase E
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 4 long SRA reads, 53 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030464510.1
SIO_010081: PPIE
subclass of: SO_0000673
so part of: PPIE
location: complement(join(608226..608622,608711..608853,609419..609604,609696..609819,609938..610038,610534..610615,610819..610845,611455..611498,611605..611703,611777..611854))
location: region:608226-611854:-1
so has part: feature:611777-611854:-1:exon
so has part: feature:611605-611703:-1:exon
so has part: feature:611455-611498:-1:exon
so has part: feature:610819-610845:-1:exon
so has part: feature:610534-610615:-1:exon
so has part: feature:609938-610038:-1:exon
so has part: feature:609696-609819:-1:exon
so has part: feature:609419-609604:-1:exon
so has part: feature:608711-608853:-1:exon
so has part: feature:608226-608622:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:611777-611854:-1:exon

position:611777:-1
position: 611777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:611605-611703:-1:exon

position:611605:-1
position: 611605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611703:-1
position: 611703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:611455-611498:-1:exon

position:611455:-1
position: 611455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611498:-1
position: 611498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:610819-610845:-1:exon

position:610819:-1
position: 610819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610845:-1
position: 610845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:610534-610615:-1:exon

position:610534:-1
position: 610534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610615:-1
position: 610615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:609938-610038:-1:exon

position:609938:-1
position: 609938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610038:-1
position: 610038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:609696-609819:-1:exon

position:609696:-1
position: 609696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609819:-1
position: 609819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:609419-609604:-1:exon

position:609419:-1
position: 609419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609604:-1
position: 609604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:608711-608853:-1:exon

position:608711:-1
position: 608711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:608853:-1
position: 608853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:608226-608622:-1:exon

position:608622:-1
position: 608622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPIE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PPIE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase E
translation: MASTKRVLYVGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDEWLKKFSGKTLEENTEEAGAEAPKTEAQEGEPPAKKSRVNPQVFMDIKIGNKPAGRLQILLRSDVVPMTVENFRCLCTHEKGFGFKGSSFHRIIPQFMCQAGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFITCDKTDWLDGKHVVFGEVTEGMDVVRQIEAQGTKDGKPKQKVIISDCGECP
SIO_010081: PPIE
subclass of: SO_0000673
so part of: PPIE
location: complement(join(608554..608622,608711..608853,609419..609604,609696..609819,609938..610038,610534..610615,610819..610845,611455..611498,611605..611703,611777..611807))
location: region:608554-611807:-1
so has part: feature:611777-611807:-1:exon
so has part: feature:611605-611703:-1:exon
so has part: feature:611455-611498:-1:exon
so has part: feature:610819-610845:-1:exon
so has part: feature:610534-610615:-1:exon
so has part: feature:609938-610038:-1:exon
so has part: feature:609696-609819:-1:exon
so has part: feature:609419-609604:-1:exon
so has part: feature:608711-608853:-1:exon
so has part: feature:608554-608622:-1:exon

XP_030320370.1
type: Protein
SIO_000068: ncbiprotein

position:608554:-1
position: 608554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611807:-1
position: 611807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:611777-611807:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:611605-611703:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:611455-611498:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:610819-610845:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:610534-610615:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:609938-610038:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:609696-609819:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:609419-609604:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:608711-608853:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:608554-608622:-1:exon

PABPC4
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PABPC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(613395..627410)
location: region:613395-627410:-1
so has part: feature:613395-627410:-1:exon
subclass of: SO_0000010

103532684
type: Gene
SIO_000068: ncbigene

position:613395:-1
position: 613395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:627410:-1
position: 627410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:613395-627410:-1:exon

PABPC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PABPC4
product: poly(A) binding protein cytoplasmic 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030464435.1
SIO_010081: PABPC4
subclass of: SO_0000673
so part of: PABPC4
location: complement(join(613395..613728,614201..614301,614384..614514,614632..614725,615340..615467,616027..616146,616306..616393,616673..616945,617435..617530,618114..618251,618851..618945,619217..619356,619829..619944,620814..621007,626337..626582,627294..627410))
location: region:613395-627410:-1
so has part: feature:627294-627410:-1:exon
so has part: feature:626337-626582:-1:exon
so has part: feature:620814-621007:-1:exon
so has part: feature:619829-619944:-1:exon
so has part: feature:619217-619356:-1:exon
so has part: feature:618851-618945:-1:exon
so has part: feature:618114-618251:-1:exon
so has part: feature:617435-617530:-1:exon
so has part: feature:616673-616945:-1:exon
so has part: feature:616306-616393:-1:exon
so has part: feature:616027-616146:-1:exon
so has part: feature:615340-615467:-1:exon
so has part: feature:614632-614725:-1:exon
so has part: feature:614384-614514:-1:exon
so has part: feature:614201-614301:-1:exon
so has part: feature:613395-613728:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:627294-627410:-1:exon

position:627294:-1
position: 627294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:626337-626582:-1:exon

position:626337:-1
position: 626337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626582:-1
position: 626582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:620814-621007:-1:exon

position:620814:-1
position: 620814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621007:-1
position: 621007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:619829-619944:-1:exon

position:619829:-1
position: 619829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619944:-1
position: 619944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:619217-619356:-1:exon

position:619217:-1
position: 619217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619356:-1
position: 619356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:618851-618945:-1:exon

position:618851:-1
position: 618851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618945:-1
position: 618945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:618114-618251:-1:exon

position:618114:-1
position: 618114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618251:-1
position: 618251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:617435-617530:-1:exon

position:617435:-1
position: 617435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617530:-1
position: 617530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:616673-616945:-1:exon

position:616673:-1
position: 616673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616945:-1
position: 616945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:616306-616393:-1:exon

position:616306:-1
position: 616306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616393:-1
position: 616393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:616027-616146:-1:exon

position:616027:-1
position: 616027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616146:-1
position: 616146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:615340-615467:-1:exon

position:615340:-1
position: 615340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615467:-1
position: 615467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:614632-614725:-1:exon

position:614632:-1
position: 614632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614725:-1
position: 614725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:614384-614514:-1:exon

position:614384:-1
position: 614384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614514:-1
position: 614514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:614201-614301:-1:exon

position:614201:-1
position: 614201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614301:-1
position: 614301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:613395-613728:-1:exon

position:613728:-1
position: 613728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PABPC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PABPC4
product: poly(A) binding protein cytoplasmic 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030464436.1
SIO_010081: PABPC4
subclass of: SO_0000673
so part of: PABPC4
location: complement(join(613395..613728,614201..614301,614384..614514,614632..614725,615340..615467,616027..616146,616306..616393,616673..616945,617435..617530,618114..618251,618851..618945,619217..619356,619829..619944,620814..621007,626337..626611,627294..627410))
location: region:613395-627410:-1
so has part: feature:627294-627410:-1:exon
so has part: feature:626337-626611:-1:exon
so has part: feature:620814-621007:-1:exon
so has part: feature:619829-619944:-1:exon
so has part: feature:619217-619356:-1:exon
so has part: feature:618851-618945:-1:exon
so has part: feature:618114-618251:-1:exon
so has part: feature:617435-617530:-1:exon
so has part: feature:616673-616945:-1:exon
so has part: feature:616306-616393:-1:exon
so has part: feature:616027-616146:-1:exon
so has part: feature:615340-615467:-1:exon
so has part: feature:614632-614725:-1:exon
so has part: feature:614384-614514:-1:exon
so has part: feature:614201-614301:-1:exon
so has part: feature:613395-613728:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:627294-627410:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626337-626611:-1:exon

position:626611:-1
position: 626611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:620814-621007:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:619829-619944:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:619217-619356:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:618851-618945:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:618114-618251:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:617435-617530:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:616673-616945:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:616306-616393:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:616027-616146:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:615340-615467:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:614632-614725:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:614384-614514:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:614201-614301:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:613395-613728:-1:exon

PABPC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PABPC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyadenylate-binding protein 4
translation: MNAAASSYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSKGFGFVSFEKHEDANKAVEDMNGKDINGKMVFVGRAQKRVERQAELKRRFEQLKQERLSRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRIAGMRALPANTIINQFQPAAGGYFMPAVPQAQSRPTYYAPNQMTQMRPNPRWQQGGRPQGFQGMPNAMRQSGPRPALRHLTPASNAPASRGLPAAAQRVGVGTAAQNLAPRPPVAAPAPRAVPPYKYASSVRSPHPAVQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPESLRSKVEEAVAVLQAHQAKKEAAQKVGVVAATS
SIO_010081: PABPC4
subclass of: SO_0000673
so part of: PABPC4
location: complement(join(614215..614301,614384..614514,614632..614725,615340..615467,616027..616146,616306..616393,616673..616945,617435..617530,618114..618251,618851..618945,619217..619356,619829..619944,620814..621007,626337..626529))
location: region:614215-626529:-1
so has part: feature:626337-626529:-1:exon
so has part: feature:620814-621007:-1:exon
so has part: feature:619829-619944:-1:exon
so has part: feature:619217-619356:-1:exon
so has part: feature:618851-618945:-1:exon
so has part: feature:618114-618251:-1:exon
so has part: feature:617435-617530:-1:exon
so has part: feature:616673-616945:-1:exon
so has part: feature:616306-616393:-1:exon
so has part: feature:616027-616146:-1:exon
so has part: feature:615340-615467:-1:exon
so has part: feature:614632-614725:-1:exon
so has part: feature:614384-614514:-1:exon
so has part: feature:614215-614301:-1:exon

XP_030320295.1
type: Protein
SIO_000068: ncbiprotein

position:614215:-1
position: 614215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626529:-1
position: 626529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:626337-626529:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:620814-621007:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:619829-619944:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:619217-619356:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:618851-618945:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:618114-618251:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:617435-617530:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:616673-616945:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:616306-616393:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:616027-616146:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:615340-615467:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:614632-614725:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:614384-614514:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:614215-614301:-1:exon

PABPC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PABPC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyadenylate-binding protein 4
translation: MNAAASSYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSKGFGFVSFEKHEDANKAVEDMNGKDINGKMVFVGRAQKRVERQAELKRRFEQLKQERLSRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRIAGMRALPANTIINQFQPAAGGYFMPAVPQAQSRPTYYAPNQMTQMRPNPRWQQGGRPQGFQGMPNAMRQSGPRPALRHLTPASNAPASRGLPAAAQRVGVGTAAQNLAPRPPVAAPAPRAVPPYKYASSVRSPHPAVQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPESLRSKVEEAVAVLQAHQAKKEAAQKVGVVAATS
SIO_010081: PABPC4
subclass of: SO_0000673
so part of: PABPC4
location: complement(join(614215..614301,614384..614514,614632..614725,615340..615467,616027..616146,616306..616393,616673..616945,617435..617530,618114..618251,618851..618945,619217..619356,619829..619944,620814..621007,626337..626529))
location: region:614215-626529:-1
so has part: feature:626337-626529:-1:exon
so has part: feature:620814-621007:-1:exon
so has part: feature:619829-619944:-1:exon
so has part: feature:619217-619356:-1:exon
so has part: feature:618851-618945:-1:exon
so has part: feature:618114-618251:-1:exon
so has part: feature:617435-617530:-1:exon
so has part: feature:616673-616945:-1:exon
so has part: feature:616306-616393:-1:exon
so has part: feature:616027-616146:-1:exon
so has part: feature:615340-615467:-1:exon
so has part: feature:614632-614725:-1:exon
so has part: feature:614384-614514:-1:exon
so has part: feature:614215-614301:-1:exon

XP_030320296.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:626337-626529:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:620814-621007:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:619829-619944:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:619217-619356:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:618851-618945:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:618114-618251:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:617435-617530:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:616673-616945:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:616306-616393:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:616027-616146:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:615340-615467:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:614632-614725:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:614384-614514:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:614215-614301:-1:exon

LOC115599592
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599592
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(615755..615898)
location: region:615755-615898:-1
so has part: feature:615755-615898:-1:exon
subclass of: SO_0000578

115599592
type: Gene
SIO_000068: ncbigene

position:615755:-1
position: 615755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615898:-1
position: 615898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615755-615898:-1:exon

LOC115599592
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: snoRNA
gene: LOC115599592
product: small nucleolar RNA SNORA55
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00431
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003988518.1
SIO_010081: LOC115599592
subclass of: SO_0000673
so part of: LOC115599592
location: complement(615755..615898)
location: region:615755-615898:-1
so has part: feature:615755-615898:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:615755-615898:-1:exon

LOC115599597
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599597
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(617044..617174)
location: region:617044-617174:-1
so has part: feature:617044-617174:-1:exon
subclass of: SO_0000578

115599597
type: Gene
SIO_000068: ncbigene

position:617044:-1
position: 617044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617174:-1
position: 617174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:617044-617174:-1:exon

LOC115599597
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: snoRNA
gene: LOC115599597
product: small nucleolar RNA SNORA55
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00431
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003988523.1
SIO_010081: LOC115599597
subclass of: SO_0000673
so part of: LOC115599597
location: complement(617044..617174)
location: region:617044-617174:-1
so has part: feature:617044-617174:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:617044-617174:-1:exon

LOC115599591
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599591
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(617679..617811)
location: region:617679-617811:-1
so has part: feature:617679-617811:-1:exon
subclass of: SO_0000578

115599591
type: Gene
SIO_000068: ncbigene

position:617679:-1
position: 617679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617811:-1
position: 617811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:617679-617811:-1:exon

LOC115599591
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: snoRNA
gene: LOC115599591
product: small nucleolar RNA SNORA55
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00431
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003988517.1
SIO_010081: LOC115599591
subclass of: SO_0000673
so part of: LOC115599591
location: complement(617679..617811)
location: region:617679-617811:-1
so has part: feature:617679-617811:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:617679-617811:-1:exon

NT5C1A
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: NT5C1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(635912..645886)
location: region:635912-645886:-1
so has part: feature:635912-645886:-1:exon
subclass of: SO_0000010

103532682
type: Gene
SIO_000068: ncbigene

position:635912:-1
position: 635912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:645886:-1
position: 645886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:635912-645886:-1:exon

NT5C1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NT5C1A
product: 5'-nucleotidase, cytosolic IA
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_030464352.1
SIO_010081: NT5C1A
subclass of: SO_0000673
so part of: NT5C1A
location: complement(join(635912..637371,637562..637746,638197..638319,638608..638737,639544..639711,645698..645886))
location: region:635912-645886:-1
so has part: feature:645698-645886:-1:exon
so has part: feature:639544-639711:-1:exon
so has part: feature:638608-638737:-1:exon
so has part: feature:638197-638319:-1:exon
so has part: feature:637562-637746:-1:exon
so has part: feature:635912-637371:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:645698-645886:-1:exon

position:645698:-1
position: 645698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:639544-639711:-1:exon

position:639544:-1
position: 639544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:639711:-1
position: 639711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:638608-638737:-1:exon

position:638608:-1
position: 638608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638737:-1
position: 638737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:638197-638319:-1:exon

position:638197:-1
position: 638197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638319:-1
position: 638319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:637562-637746:-1:exon

position:637562:-1
position: 637562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:637746:-1
position: 637746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:635912-637371:-1:exon

position:637371:-1
position: 637371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NT5C1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NT5C1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic 5'-nucleotidase 1A
translation: MEPPGTAGAPGAAERPWEEAKAFYDNLAPKKKPKSPKPENAITIAVSSRALFRMEEEQKIYTEQGVEAYVKYQLDHENEPFLPGAAFPFVKALEAVNTQLRQLYPDSEELFDIVLMTNNHAQVGVRLINSINHYDLFIERFCMTGGNSPICYLKAYHTNLYLSSDAEKVSGAIEEGIAAATIFSPSRDLEVSDNQLRVAFDGDAVLFSDESEQIVKAHGLDMFFEHEKAHENKPLAQGPLKGFLEALGKLQKKFYSKGLRLECPIRTYLVTARSAASSGARALKTLRSWGLETDEALFLAGAPKGPLLKKIRPHIFFDDQMFHVEGAKEMGTVAAHVPYGIAQKPRRPAQEKQTPNSK
SIO_010081: NT5C1A
subclass of: SO_0000673
so part of: NT5C1A
location: complement(join(637006..637371,637562..637746,638197..638319,638608..638737,639544..639711,645698..645802))
location: region:637006-645802:-1
so has part: feature:645698-645802:-1:exon
so has part: feature:639544-639711:-1:exon
so has part: feature:638608-638737:-1:exon
so has part: feature:638197-638319:-1:exon
so has part: feature:637562-637746:-1:exon
so has part: feature:637006-637371:-1:exon

XP_030320212.1
type: Protein
SIO_000068: ncbiprotein

position:637006:-1
position: 637006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:645802:-1
position: 645802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:645698-645802:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:639544-639711:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:638608-638737:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:638197-638319:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:637562-637746:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:637006-637371:-1:exon

HPCAL4
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: HPCAL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(648204..649292)
location: region:648204-649292:-1
so has part: feature:648204-649292:-1:exon
subclass of: SO_0000010

103532669
type: Gene
SIO_000068: ncbigene

position:648204:-1
position: 648204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:649292:-1
position: 649292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:648204-649292:-1:exon

HPCAL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: HPCAL4
product: hippocalcin like 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 55% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008498454.2
SIO_010081: HPCAL4
subclass of: SO_0000673
so part of: HPCAL4
location: complement(join(648204..648526,649131..649292))
location: region:648204-649292:-1
so has part: feature:649131-649292:-1:exon
so has part: feature:648204-648526:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:649131-649292:-1:exon

position:649131:-1
position: 649131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:648204-648526:-1:exon

position:648526:-1
position: 648526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HPCAL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: HPCAL4
product: hippocalcin like 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 Proteins, and 38% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008498455.2
SIO_010081: HPCAL4
subclass of: SO_0000673
so part of: HPCAL4
location: complement(join(648204..648526,648778..648993,649131..649292))
location: region:648204-649292:-1
so has part: feature:649131-649292:-1:exon
so has part: feature:648778-648993:-1:exon
so has part: feature:648204-648526:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:649131-649292:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:648778-648993:-1:exon

position:648778:-1
position: 648778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648993:-1
position: 648993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:648204-648526:-1:exon

HPCAL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: HPCAL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hippocalcin-like protein 4 isoform X2
translation: MGKHNSKLAPEMLDDLVRSTEFSEQELKQWYKGFLKDCPTGILNLEEFQQLYIKAIYKMVGTVIMMRMNQDGLTPQQRVDKIFTKMDKDKDDQISLEEFKEAAKSDPSIVLLLQCDMQK
SIO_010081: HPCAL4
subclass of: SO_0000673
so part of: HPCAL4
location: complement(join(648329..648526,649131..649292))
location: region:648329-649292:-1
so has part: feature:649131-649292:-1:exon
so has part: feature:648329-648526:-1:exon

XP_008496676.1
type: Protein
SIO_000068: ncbiprotein

position:648329:-1
position: 648329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:649131-649292:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:648329-648526:-1:exon

HPCAL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: HPCAL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hippocalcin-like protein 4 isoform X1
translation: MGKHNSKLAPEMLDDLVRSTEFSEQELKQWYKGFLKDCPTGILNLEEFQQLYIKFFPYGDASKFAQHAFRTFDKNGDGTIDFREFICALSVTSRGTFEQKLNWAFEMYDLDGDGKITRLEMLEIIEAIYKMVGTVIMMRMNQDGLTPQQRVDKIFTKMDKDKDDQISLEEFKEAAKSDPSIVLLLQCDMQK
SIO_010081: HPCAL4
subclass of: SO_0000673
so part of: HPCAL4
location: complement(join(648329..648526,648778..648993,649131..649292))
location: region:648329-649292:-1
so has part: feature:649131-649292:-1:exon
so has part: feature:648778-648993:-1:exon
so has part: feature:648329-648526:-1:exon

XP_008496677.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:649131-649292:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:648778-648993:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:648329-648526:-1:exon

LOC103532681
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103532681
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 656754..660666
location: region:656754-660666:1
so has part: feature:656754-660666:1:exon
subclass of: SO_0000010

103532681
type: Gene
SIO_000068: ncbigene

position:656754:1
position: 656754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660666:1
position: 660666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:656754-660666:1:exon

LOC103532681
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103532681
product: protein FAM49A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 Proteins, and 44% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030464417.1
SIO_010081: LOC103532681
subclass of: SO_0000673
so part of: LOC103532681
location: join(656754..656823,658667..658788,658886..658991,659185..659321,659479..659556,659681..659797,659902..659981,660074..660200,660407..660477,660603..660666)
location: region:656754-660666:1
so has part: feature:656754-656823:1:exon
so has part: feature:658667-658788:1:exon
so has part: feature:658886-658991:1:exon
so has part: feature:659185-659321:1:exon
so has part: feature:659479-659556:1:exon
so has part: feature:659681-659797:1:exon
so has part: feature:659902-659981:1:exon
so has part: feature:660074-660200:1:exon
so has part: feature:660407-660477:1:exon
so has part: feature:660603-660666:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:656754-656823:1:exon

position:656823:1
position: 656823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:658667-658788:1:exon

position:658667:1
position: 658667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:658788:1
position: 658788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:658886-658991:1:exon

position:658886:1
position: 658886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:658991:1
position: 658991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:659185-659321:1:exon

position:659185:1
position: 659185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659321:1
position: 659321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:659479-659556:1:exon

position:659479:1
position: 659479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659556:1
position: 659556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:659681-659797:1:exon

position:659681:1
position: 659681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659797:1
position: 659797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:659902-659981:1:exon

position:659902:1
position: 659902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659981:1
position: 659981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:660074-660200:1:exon

position:660074:1
position: 660074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660200:1
position: 660200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:660407-660477:1:exon

position:660407:1
position: 660407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660477:1
position: 660477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:660603-660666:1:exon

position:660603:1
position: 660603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC103532681
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103532681
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM49A isoform X1
translation: MGNLIKVLGKDLENCPHFFLDFENAQPTEAETAVWNQVNAVLEEAQTVLAELQSYTGAGQEIREAIQNPGDLRLQERAWSAVCPLVAKLKRFYEFSLRLENALRSLLEALTSPPYAPTQHLEREQALAKQFAEILHFTLSFDELKMTNPAIQNDFSYYRRTISRNRINNLQLDAESEVNNEMANRMSLFYAEATPMLKTLSNATTKFVSENKTLPIEDTTDCLSTMACVCRVMLETPEYRSRFTNTETLLFCMRVMVGVIILYDHVHPVGAFAKTSKIDMKGCIKVLKDQPSTSTEGLLNALRYTTRHLNDDTTSKQIRALLQ
SIO_010081: LOC103532681
subclass of: SO_0000673
so part of: LOC103532681
location: join(656754..656823,658667..658788,658886..658991,659185..659321,659479..659556,659681..659797,659902..659981,660074..660200,660407..660477,660603..660666)
location: region:656754-660666:1
so has part: feature:656754-656823:1:exon
so has part: feature:658667-658788:1:exon
so has part: feature:658886-658991:1:exon
so has part: feature:659185-659321:1:exon
so has part: feature:659479-659556:1:exon
so has part: feature:659681-659797:1:exon
so has part: feature:659902-659981:1:exon
so has part: feature:660074-660200:1:exon
so has part: feature:660407-660477:1:exon
so has part: feature:660603-660666:1:exon

XP_030320277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:656754-656823:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:658667-658788:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:658886-658991:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:659185-659321:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:659479-659556:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:659681-659797:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:659902-659981:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:660074-660200:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:660407-660477:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:660603-660666:1:exon

LOC103532681
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103532681
product: protein FAM49A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 Proteins, and 43% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030464418.1
SIO_010081: LOC103532681
subclass of: SO_0000673
so part of: LOC103532681
location: join(657962..658061,658667..658788,658886..658991,659185..659321,659479..659556,659681..659797,659902..659981,660074..660200,660407..660477,660603..660666)
location: region:657962-660666:1
so has part: feature:657962-658061:1:exon
so has part: feature:658667-658788:1:exon
so has part: feature:658886-658991:1:exon
so has part: feature:659185-659321:1:exon
so has part: feature:659479-659556:1:exon
so has part: feature:659681-659797:1:exon
so has part: feature:659902-659981:1:exon
so has part: feature:660074-660200:1:exon
so has part: feature:660407-660477:1:exon
so has part: feature:660603-660666:1:exon

position:657962:1
position: 657962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:657962-658061:1:exon

position:658061:1
position: 658061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:658667-658788:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:658886-658991:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:659185-659321:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:659479-659556:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:659681-659797:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:659902-659981:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:660074-660200:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:660407-660477:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:660603-660666:1:exon

LOC103532681
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103532681
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM49A isoform X2
translation: MGNLLKVLTYNELDQGPNFFLDFENAQPTEAETAVWNQVNAVLEEAQTVLAELQSYTGAGQEIREAIQNPGDLRLQERAWSAVCPLVAKLKRFYEFSLRLENALRSLLEALTSPPYAPTQHLEREQALAKQFAEILHFTLSFDELKMTNPAIQNDFSYYRRTISRNRINNLQLDAESEVNNEMANRMSLFYAEATPMLKTLSNATTKFVSENKTLPIEDTTDCLSTMACVCRVMLETPEYRSRFTNTETLLFCMRVMVGVIILYDHVHPVGAFAKTSKIDMKGCIKVLKDQPSTSTEGLLNALRYTTRHLNDDTTSKQIRALLQ
SIO_010081: LOC103532681
subclass of: SO_0000673
so part of: LOC103532681
location: join(657989..658061,658667..658788,658886..658991,659185..659321,659479..659556,659681..659797,659902..659981,660074..660200,660407..660477,660603..660666)
location: region:657989-660666:1
so has part: feature:657989-658061:1:exon
so has part: feature:658667-658788:1:exon
so has part: feature:658886-658991:1:exon
so has part: feature:659185-659321:1:exon
so has part: feature:659479-659556:1:exon
so has part: feature:659681-659797:1:exon
so has part: feature:659902-659981:1:exon
so has part: feature:660074-660200:1:exon
so has part: feature:660407-660477:1:exon
so has part: feature:660603-660666:1:exon

XP_030320278.1
type: Protein
SIO_000068: ncbiprotein

position:657989:1
position: 657989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:657989-658061:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:658667-658788:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:658886-658991:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:659185-659321:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:659479-659556:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:659681-659797:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:659902-659981:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:660074-660200:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:660407-660477:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:660603-660666:1:exon

TRIT1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: TRIT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(665097..679846)
location: region:665097-679846:-1
so has part: feature:665097-679846:-1:exon
subclass of: SO_0000010

103532668
type: Gene
SIO_000068: ncbigene

position:665097:-1
position: 665097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679846:-1
position: 679846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:665097-679846:-1:exon

TRIT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TRIT1
product: tRNA isopentenyltransferase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_030464524.1
SIO_010081: TRIT1
subclass of: SO_0000673
so part of: TRIT1
location: complement(join(665097..665687,668110..668227,668874..668983,670449..670526,671395..671507,671607..671718,671986..672128,672924..673069,673244..673342,673775..673915,679667..679846))
location: region:665097-679846:-1
so has part: feature:679667-679846:-1:exon
so has part: feature:673775-673915:-1:exon
so has part: feature:673244-673342:-1:exon
so has part: feature:672924-673069:-1:exon
so has part: feature:671986-672128:-1:exon
so has part: feature:671607-671718:-1:exon
so has part: feature:671395-671507:-1:exon
so has part: feature:670449-670526:-1:exon
so has part: feature:668874-668983:-1:exon
so has part: feature:668110-668227:-1:exon
so has part: feature:665097-665687:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:679667-679846:-1:exon

position:679667:-1
position: 679667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:673775-673915:-1:exon

position:673775:-1
position: 673775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673915:-1
position: 673915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:673244-673342:-1:exon

position:673244:-1
position: 673244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673342:-1
position: 673342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:672924-673069:-1:exon

position:672924:-1
position: 672924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673069:-1
position: 673069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:671986-672128:-1:exon

position:671986:-1
position: 671986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:672128:-1
position: 672128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:671607-671718:-1:exon

position:671607:-1
position: 671607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:671718:-1
position: 671718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:671395-671507:-1:exon

position:671395:-1
position: 671395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:671507:-1
position: 671507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:670449-670526:-1:exon

position:670449:-1
position: 670449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670526:-1
position: 670526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:668874-668983:-1:exon

position:668874:-1
position: 668874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668983:-1
position: 668983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:668110-668227:-1:exon

position:668110:-1
position: 668110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668227:-1
position: 668227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:665097-665687:-1:exon

position:665687:-1
position: 665687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRIT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TRIT1
product: tRNA isopentenyltransferase 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464528.1
SIO_010081: TRIT1
subclass of: SO_0000673
so part of: TRIT1
location: complement(join(665097..665687,668110..668227,668874..668983,670449..670526,671395..671507,671607..671718,671986..672128,672924..673069,673244..673342,673775..673915,679633..679649))
location: region:665097-679649:-1
so has part: feature:679633-679649:-1:exon
so has part: feature:673775-673915:-1:exon
so has part: feature:673244-673342:-1:exon
so has part: feature:672924-673069:-1:exon
so has part: feature:671986-672128:-1:exon
so has part: feature:671607-671718:-1:exon
so has part: feature:671395-671507:-1:exon
so has part: feature:670449-670526:-1:exon
so has part: feature:668874-668983:-1:exon
so has part: feature:668110-668227:-1:exon
so has part: feature:665097-665687:-1:exon

position:679649:-1
position: 679649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:679633-679649:-1:exon

position:679633:-1
position: 679633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:673775-673915:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:673244-673342:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:672924-673069:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:671986-672128:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:671607-671718:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:671395-671507:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:670449-670526:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:668874-668983:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:668110-668227:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:665097-665687:-1:exon

TRIT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TRIT1
product: tRNA isopentenyltransferase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464526.1
SIO_010081: TRIT1
subclass of: SO_0000673
so part of: TRIT1
location: complement(join(665097..665687,668110..668227,668874..668983,670449..670526,671395..671507,671607..671718,671986..672128,672924..673069,673244..673342,673775..673915,676844..676939))
location: region:665097-676939:-1
so has part: feature:676844-676939:-1:exon
so has part: feature:673775-673915:-1:exon
so has part: feature:673244-673342:-1:exon
so has part: feature:672924-673069:-1:exon
so has part: feature:671986-672128:-1:exon
so has part: feature:671607-671718:-1:exon
so has part: feature:671395-671507:-1:exon
so has part: feature:670449-670526:-1:exon
so has part: feature:668874-668983:-1:exon
so has part: feature:668110-668227:-1:exon
so has part: feature:665097-665687:-1:exon

position:676939:-1
position: 676939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:676844-676939:-1:exon

position:676844:-1
position: 676844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:673775-673915:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:673244-673342:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:672924-673069:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:671986-672128:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:671607-671718:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:671395-671507:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:670449-670526:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:668874-668983:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:668110-668227:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:665097-665687:-1:exon

TRIT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TRIT1
product: tRNA isopentenyltransferase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464527.1
SIO_010081: TRIT1
subclass of: SO_0000673
so part of: TRIT1
location: complement(join(665097..665687,668110..668227,668874..668983,670449..670526,671395..671507,671607..671718,671986..672128,672924..673069,673244..673342,673775..673915,674151..674225))
location: region:665097-674225:-1
so has part: feature:674151-674225:-1:exon
so has part: feature:673775-673915:-1:exon
so has part: feature:673244-673342:-1:exon
so has part: feature:672924-673069:-1:exon
so has part: feature:671986-672128:-1:exon
so has part: feature:671607-671718:-1:exon
so has part: feature:671395-671507:-1:exon
so has part: feature:670449-670526:-1:exon
so has part: feature:668874-668983:-1:exon
so has part: feature:668110-668227:-1:exon
so has part: feature:665097-665687:-1:exon

position:674225:-1
position: 674225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:674151-674225:-1:exon

position:674151:-1
position: 674151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:673775-673915:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:673244-673342:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:672924-673069:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:671986-672128:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:671607-671718:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:671395-671507:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:670449-670526:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:668874-668983:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:668110-668227:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:665097-665687:-1:exon

TRIT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TRIT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA dimethylallyltransferase isoform X1
translation: MAAAGPGRAMAAAALRLGRASAPPRPLVVILGATGTGKSALALQLGLRLGGEIVSADSMQVYKGLDIITNKVSPQEQRLCRHHMISFVDPLVSNYTVVDFRDKAMALIEDIFSRDKIPIVVGGTNYYIESLLWKVLINTKKASTAPSPVTDRKVELEQLDGAELHRRLSQVDPEMAAKLHPHDKRKVARSLQVFEETGIPHSEILHQQQEEEGGGPLGGPLKYPHSCILWLHAEQAALDQRLEKRVDEMLAAGLLEELRDFHRRYNQEKVAENQQDYQHGIFQSIGFKEFHEYLISEGKCSPETSALLLQKGIQALKQVTKRYARRQNKWVRNRFLRRPGPNVPPVYGLEVSDLLRWEEDVLQPALQIVESFIQGREPPAEPVKLECDMNENKRSHHMCELCDRVIIGDREWAAHTRSKSHLHHLKKRRKLEAANPTAEGDIGDTGSLGGDSSLPLP
SIO_010081: TRIT1
subclass of: SO_0000673
so part of: TRIT1
location: complement(join(665554..665687,668110..668227,668874..668983,670449..670526,671395..671507,671607..671718,671986..672128,672924..673069,673244..673342,673775..673915,679667..679846))
location: region:665554-679846:-1
so has part: feature:679667-679846:-1:exon
so has part: feature:673775-673915:-1:exon
so has part: feature:673244-673342:-1:exon
so has part: feature:672924-673069:-1:exon
so has part: feature:671986-672128:-1:exon
so has part: feature:671607-671718:-1:exon
so has part: feature:671395-671507:-1:exon
so has part: feature:670449-670526:-1:exon
so has part: feature:668874-668983:-1:exon
so has part: feature:668110-668227:-1:exon
so has part: feature:665554-665687:-1:exon

XP_030320384.1
type: Protein
SIO_000068: ncbiprotein

position:665554:-1
position: 665554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:679667-679846:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:673775-673915:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:673244-673342:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:672924-673069:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:671986-672128:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:671607-671718:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:671395-671507:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:670449-670526:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:668874-668983:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:668110-668227:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:665554-665687:-1:exon

TRIT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TRIT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA dimethylallyltransferase isoform X3
translation: MISFVDPLVSNYTVVDFRDKAMALIEDIFSRDKIPIVVGGTNYYIESLLWKVLINTKKASTAPSPVTDRKVELEQLDGAELHRRLSQVDPEMAAKLHPHDKRKVARSLQVFEETGIPHSEILHQQQEEEGGGPLGGPLKYPHSCILWLHAEQAALDQRLEKRVDEMLAAGLLEELRDFHRRYNQEKVAENQQDYQHGIFQSIGFKEFHEYLISEGKCSPETSALLLQKGIQALKQVTKRYARRQNKWVRNRFLRRPGPNVPPVYGLEVSDLLRWEEDVLQPALQIVESFIQGREPPAEPVKLECDMNENKRSHHMCELCDRVIIGDREWAAHTRSKSHLHHLKKRRKLEAANPTAEGDIGDTGSLGGDSSLPLP
SIO_010081: TRIT1
subclass of: SO_0000673
so part of: TRIT1
location: complement(join(665554..665687,668110..668227,668874..668983,670449..670526,671395..671507,671607..671718,671986..672128,672924..673069,673244..673342,673775..673846))
location: region:665554-673846:-1
so has part: feature:673775-673846:-1:exon
so has part: feature:673244-673342:-1:exon
so has part: feature:672924-673069:-1:exon
so has part: feature:671986-672128:-1:exon
so has part: feature:671607-671718:-1:exon
so has part: feature:671395-671507:-1:exon
so has part: feature:670449-670526:-1:exon
so has part: feature:668874-668983:-1:exon
so has part: feature:668110-668227:-1:exon
so has part: feature:665554-665687:-1:exon

XP_030320386.1
type: Protein
SIO_000068: ncbiprotein

position:673846:-1
position: 673846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:673775-673846:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:673244-673342:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:672924-673069:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:671986-672128:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:671607-671718:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:671395-671507:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:670449-670526:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:668874-668983:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:668110-668227:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:665554-665687:-1:exon

TRIT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TRIT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA dimethylallyltransferase isoform X3
translation: MISFVDPLVSNYTVVDFRDKAMALIEDIFSRDKIPIVVGGTNYYIESLLWKVLINTKKASTAPSPVTDRKVELEQLDGAELHRRLSQVDPEMAAKLHPHDKRKVARSLQVFEETGIPHSEILHQQQEEEGGGPLGGPLKYPHSCILWLHAEQAALDQRLEKRVDEMLAAGLLEELRDFHRRYNQEKVAENQQDYQHGIFQSIGFKEFHEYLISEGKCSPETSALLLQKGIQALKQVTKRYARRQNKWVRNRFLRRPGPNVPPVYGLEVSDLLRWEEDVLQPALQIVESFIQGREPPAEPVKLECDMNENKRSHHMCELCDRVIIGDREWAAHTRSKSHLHHLKKRRKLEAANPTAEGDIGDTGSLGGDSSLPLP
SIO_010081: TRIT1
subclass of: SO_0000673
so part of: TRIT1
location: complement(join(665554..665687,668110..668227,668874..668983,670449..670526,671395..671507,671607..671718,671986..672128,672924..673069,673244..673342,673775..673846))
location: region:665554-673846:-1
so has part: feature:673775-673846:-1:exon
so has part: feature:673244-673342:-1:exon
so has part: feature:672924-673069:-1:exon
so has part: feature:671986-672128:-1:exon
so has part: feature:671607-671718:-1:exon
so has part: feature:671395-671507:-1:exon
so has part: feature:670449-670526:-1:exon
so has part: feature:668874-668983:-1:exon
so has part: feature:668110-668227:-1:exon
so has part: feature:665554-665687:-1:exon

XP_030320387.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:673775-673846:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:673244-673342:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:672924-673069:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:671986-672128:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:671607-671718:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:671395-671507:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:670449-670526:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:668874-668983:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:668110-668227:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:665554-665687:-1:exon

TRIT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TRIT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA dimethylallyltransferase isoform X3
translation: MISFVDPLVSNYTVVDFRDKAMALIEDIFSRDKIPIVVGGTNYYIESLLWKVLINTKKASTAPSPVTDRKVELEQLDGAELHRRLSQVDPEMAAKLHPHDKRKVARSLQVFEETGIPHSEILHQQQEEEGGGPLGGPLKYPHSCILWLHAEQAALDQRLEKRVDEMLAAGLLEELRDFHRRYNQEKVAENQQDYQHGIFQSIGFKEFHEYLISEGKCSPETSALLLQKGIQALKQVTKRYARRQNKWVRNRFLRRPGPNVPPVYGLEVSDLLRWEEDVLQPALQIVESFIQGREPPAEPVKLECDMNENKRSHHMCELCDRVIIGDREWAAHTRSKSHLHHLKKRRKLEAANPTAEGDIGDTGSLGGDSSLPLP
SIO_010081: TRIT1
subclass of: SO_0000673
so part of: TRIT1
location: complement(join(665554..665687,668110..668227,668874..668983,670449..670526,671395..671507,671607..671718,671986..672128,672924..673069,673244..673342,673775..673846))
location: region:665554-673846:-1
so has part: feature:673775-673846:-1:exon
so has part: feature:673244-673342:-1:exon
so has part: feature:672924-673069:-1:exon
so has part: feature:671986-672128:-1:exon
so has part: feature:671607-671718:-1:exon
so has part: feature:671395-671507:-1:exon
so has part: feature:670449-670526:-1:exon
so has part: feature:668874-668983:-1:exon
so has part: feature:668110-668227:-1:exon
so has part: feature:665554-665687:-1:exon

XP_030320388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:673775-673846:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:673244-673342:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:672924-673069:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:671986-672128:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:671607-671718:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:671395-671507:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:670449-670526:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:668874-668983:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:668110-668227:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:665554-665687:-1:exon

TRIT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TRIT1
product: tRNA isopentenyltransferase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030464525.1
SIO_010081: TRIT1
subclass of: SO_0000673
so part of: TRIT1
location: complement(join(665564..665687,668874..668983,670449..670526,671395..671507,671607..671718,671986..672128,672924..673069,673244..673342,673775..673915,679667..679825))
location: region:665564-679825:-1
so has part: feature:679667-679825:-1:exon
so has part: feature:673775-673915:-1:exon
so has part: feature:673244-673342:-1:exon
so has part: feature:672924-673069:-1:exon
so has part: feature:671986-672128:-1:exon
so has part: feature:671607-671718:-1:exon
so has part: feature:671395-671507:-1:exon
so has part: feature:670449-670526:-1:exon
so has part: feature:668874-668983:-1:exon
so has part: feature:665564-665687:-1:exon

position:665564:-1
position: 665564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679825:-1
position: 679825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:679667-679825:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:673775-673915:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:673244-673342:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:672924-673069:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:671986-672128:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:671607-671718:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:671395-671507:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:670449-670526:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:668874-668983:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:665564-665687:-1:exon

TRIT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TRIT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA dimethylallyltransferase isoform X2
translation: MAAAALRLGRASAPPRPLVVILGATGTGKSALALQLGLRLGGEIVSADSMQVYKGLDIITNKVSPQEQRLCRHHMISFVDPLVSNYTVVDFRDKAMALIEDIFSRDKIPIVVGGTNYYIESLLWKVLINTKKASTAPSPVTDRKVELEQLDGAELHRRLSQVDPEMAAKLHPHDKRKVARSLQVFEETGIPHSEILHQQQEEEGGGPLGGPLKYPHSCILWLHAEQAALDQRLEKRVDEMLAAGLLEELRDFHRRYNQEKVAENQQDYQHGIFQSIGFKEFHEYLISEGKCSPETSALLLQKGIQALKQVTKRYARRQNKWVRNRFLRRPGPNVPPVYGLEVSDLLRWEEDVLQPALQIVESFIQLTHAPNPTCTI
SIO_010081: TRIT1
subclass of: SO_0000673
so part of: TRIT1
location: complement(join(665652..665687,668874..668983,670449..670526,671395..671507,671607..671718,671986..672128,672924..673069,673244..673342,673775..673915,679667..679819))
location: region:665652-679819:-1
so has part: feature:679667-679819:-1:exon
so has part: feature:673775-673915:-1:exon
so has part: feature:673244-673342:-1:exon
so has part: feature:672924-673069:-1:exon
so has part: feature:671986-672128:-1:exon
so has part: feature:671607-671718:-1:exon
so has part: feature:671395-671507:-1:exon
so has part: feature:670449-670526:-1:exon
so has part: feature:668874-668983:-1:exon
so has part: feature:665652-665687:-1:exon

XP_030320385.1
type: Protein
SIO_000068: ncbiprotein

position:665652:-1
position: 665652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679819:-1
position: 679819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:679667-679819:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:673775-673915:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:673244-673342:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:672924-673069:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:671986-672128:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:671607-671718:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:671395-671507:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:670449-670526:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:668874-668983:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:665652-665687:-1:exon

MYCL
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: MYCL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(683196..686890)
location: region:683196-686890:-1
so has part: feature:683196-686890:-1:exon
subclass of: SO_0000010

103532680
type: Gene
SIO_000068: ncbigene

position:683196:-1
position: 683196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686890:-1
position: 686890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:683196-686890:-1:exon

MYCL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MYCL
product: MYCL proto-oncogene, bHLH transcription factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030464416.1
SIO_010081: MYCL
subclass of: SO_0000673
so part of: MYCL
location: complement(join(683196..683872,686164..686890))
location: region:683196-686890:-1
so has part: feature:686164-686890:-1:exon
so has part: feature:683196-683872:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:686164-686890:-1:exon

position:686164:-1
position: 686164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:683196-683872:-1:exon

position:683872:-1
position: 683872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MYCL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MYCL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein L-Myc
translation: MEFDSYQHYFYDHDAQEDFHRSTAPSEDIWKKFELVPTPPLFPLGTPGEKACCSGPEERSGWLSRCCLPGEEPEYLFGTGEIFGNLSAFILKDCMWSGFSTRERLEKAMTEKLASGTQRATPHKPSFAQDLGFSSSVSECVDPAAVFLCPLAESKIPSSSGSEGQSDSEGEEIDVVMVEKRPPLSLRQPVTITLRADPLDPCMKRFHISVHQQQHNYAARSPPDASAPPEPPQQAEDEPPKAPEPSPATPLPEPSLEKASGSSSPGSDSEDVAKRKNHNYLERKRRNDLRSRFLALRDQVPGLASCPKTPKVVILSKSSEYLQSLISAERRMAAEKRQLRLRQTQLLKRIAHLQGQ
SIO_010081: MYCL
subclass of: SO_0000673
so part of: MYCL
location: complement(join(683307..683872,686164..686668))
location: region:683307-686668:-1
so has part: feature:686164-686668:-1:exon
so has part: feature:683307-683872:-1:exon

XP_030320276.1
type: Protein
SIO_000068: ncbiprotein

position:683307:-1
position: 683307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686668:-1
position: 686668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:686164-686668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:683307-683872:-1:exon

MFSD2A
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: MFSD2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 692003..701641
location: region:692003-701641:1
so has part: feature:692003-701641:1:exon
subclass of: SO_0000010

103532679
type: Gene
SIO_000068: ncbigene

position:692003:1
position: 692003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:701641:1
position: 701641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:692003-701641:1:exon

MFSD2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MFSD2A
product: major facilitator superfamily domain containing 2A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 21 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030464396.1
SIO_010081: MFSD2A
subclass of: SO_0000673
so part of: MFSD2A
location: join(692003..692080,692208..692330,692905..693029,696420..696543,696661..696739,697226..697398,697519..697609,698212..698333,698634..698717,699617..699700,699951..700063,700266..700409,700613..700789,701139..701641)
location: region:692003-701641:1
so has part: feature:692003-692080:1:exon
so has part: feature:692208-692330:1:exon
so has part: feature:692905-693029:1:exon
so has part: feature:696420-696543:1:exon
so has part: feature:696661-696739:1:exon
so has part: feature:697226-697398:1:exon
so has part: feature:697519-697609:1:exon
so has part: feature:698212-698333:1:exon
so has part: feature:698634-698717:1:exon
so has part: feature:699617-699700:1:exon
so has part: feature:699951-700063:1:exon
so has part: feature:700266-700409:1:exon
so has part: feature:700613-700789:1:exon
so has part: feature:701139-701641:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:692003-692080:1:exon

position:692080:1
position: 692080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:692208-692330:1:exon

position:692208:1
position: 692208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:692330:1
position: 692330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:692905-693029:1:exon

position:692905:1
position: 692905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:693029:1
position: 693029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:696420-696543:1:exon

position:696420:1
position: 696420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:696543:1
position: 696543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:696661-696739:1:exon

position:696661:1
position: 696661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:696739:1
position: 696739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:697226-697398:1:exon

position:697226:1
position: 697226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:697398:1
position: 697398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:697519-697609:1:exon

position:697519:1
position: 697519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:697609:1
position: 697609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:698212-698333:1:exon

position:698212:1
position: 698212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:698333:1
position: 698333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:698634-698717:1:exon

position:698634:1
position: 698634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:698717:1
position: 698717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:699617-699700:1:exon

position:699617:1
position: 699617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:699700:1
position: 699700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:699951-700063:1:exon

position:699951:1
position: 699951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:700063:1
position: 700063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:700266-700409:1:exon

position:700266:1
position: 700266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:700409:1
position: 700409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:700613-700789:1:exon

position:700613:1
position: 700613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:700789:1
position: 700789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:701139-701641:1:exon

position:701139:1
position: 701139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MFSD2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MFSD2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent lysophosphatidylcholine symporter 1 isoform X1
translation: MAGGGGAERARPGGLLPAACRQPRRRESRERLSVCSKLCYAVGGAPYQTTGCVLGFFLQIYLLDVAQLDPFYASIILFVGRAWDAITDPMVGFFISKTSWTRLGRLMPWIIFSTPFAVISYFLIWFVPDISRGQVLWYLIFYCIFQTLVTCFHVPYSALTMFISREQSERDSATAYRMTVEVLGTVLGTAIQGQIVGKVNTPCIKSPLFISTANSSVAMEELNMTHETGSLTDTRNAYMIAAGVIGGLYILCALILSVGVREKRESSELRSDKPVSFFQGLKLVMNHGAYIKLIAGFLFTSLAFMLLEGNFALFCTYTLGFRNEFQNILLAIMLSATLTIPLWQWFLTRFGKKTAVYVGISSAIPFLIMVAVLDSNLIITYIVAVAAGISVAAAFLLPWSMLPDVIDDFKLQHPESQGHEAIFFSFYVFFTKFTSGVSLGISTLSLDFAGYQTRGCSQPSEVNFTLKMLVSAVPVGLILLGLLLFKLYPIDEEKRKKNKKALQDLREESNSSSESDNTELASIV
SIO_010081: MFSD2A
subclass of: SO_0000673
so part of: MFSD2A
location: join(692003..692080,692208..692330,692905..693029,696420..696543,696661..696739,697226..697398,697519..697609,698212..698333,698634..698717,699617..699700,699951..700063,700266..700409,700613..700789,701139..701196)
location: region:692003-701196:1
so has part: feature:692003-692080:1:exon
so has part: feature:692208-692330:1:exon
so has part: feature:692905-693029:1:exon
so has part: feature:696420-696543:1:exon
so has part: feature:696661-696739:1:exon
so has part: feature:697226-697398:1:exon
so has part: feature:697519-697609:1:exon
so has part: feature:698212-698333:1:exon
so has part: feature:698634-698717:1:exon
so has part: feature:699617-699700:1:exon
so has part: feature:699951-700063:1:exon
so has part: feature:700266-700409:1:exon
so has part: feature:700613-700789:1:exon
so has part: feature:701139-701196:1:exon

XP_030320256.1
type: Protein
SIO_000068: ncbiprotein

position:701196:1
position: 701196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:692003-692080:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:692208-692330:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:692905-693029:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:696420-696543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:696661-696739:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:697226-697398:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:697519-697609:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:698212-698333:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:698634-698717:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:699617-699700:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:699951-700063:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:700266-700409:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:700613-700789:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:701139-701196:1:exon

MFSD2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MFSD2A
product: major facilitator superfamily domain containing 2A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030464397.1
SIO_010081: MFSD2A
subclass of: SO_0000673
so part of: MFSD2A
location: join(692144..692330,692905..693029,696420..696543,696661..696739,697226..697398,697519..697609,698212..698248,698306..698333,698634..698717,699617..699700,699951..700063,700266..700409,700613..700789,701139..701641)
location: region:692144-701641:1
so has part: feature:692144-692330:1:exon
so has part: feature:692905-693029:1:exon
so has part: feature:696420-696543:1:exon
so has part: feature:696661-696739:1:exon
so has part: feature:697226-697398:1:exon
so has part: feature:697519-697609:1:exon
so has part: feature:698212-698248:1:exon
so has part: feature:698306-698333:1:exon
so has part: feature:698634-698717:1:exon
so has part: feature:699617-699700:1:exon
so has part: feature:699951-700063:1:exon
so has part: feature:700266-700409:1:exon
so has part: feature:700613-700789:1:exon
so has part: feature:701139-701641:1:exon

position:692144:1
position: 692144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:692144-692330:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:692905-693029:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:696420-696543:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:696661-696739:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:697226-697398:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:697519-697609:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:698212-698248:1:exon

position:698248:1
position: 698248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:698306-698333:1:exon

position:698306:1
position: 698306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:698634-698717:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:699617-699700:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:699951-700063:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:700266-700409:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:700613-700789:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:701139-701641:1:exon

MFSD2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MFSD2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent lysophosphatidylcholine symporter 1 isoform X2
translation: MVGFFISKTSWTRLGRLMPWIIFSTPFAVISYFLIWFVPDISRGQVLWYLIFYCIFQTLVTCFHVPYSALTMFISREQSERDSATAYRMTVEVLGTVLGTAIQGQIVGKVNTPCIKSPLFISTANSSVAMEELNMTHETGSLTDTRNAYMIAAGVIGGLYILCALILSVGVREKRESSELRSDKPVSFFLFTSLAFMLLEGNFALFCTYTLGFRNEFQNILLAIMLSATLTIPLWQWFLTRFGKKTAVYVGISSAIPFLIMVAVLDSNLIITYIVAVAAGISVAAAFLLPWSMLPDVIDDFKLQHPESQGHEAIFFSFYVFFTKFTSGVSLGISTLSLDFAGYQTRGCSQPSEVNFTLKMLVSAVPVGLILLGLLLFKLYPIDEEKRKKNKKALQDLREESNSSSESDNTELASIV
SIO_010081: MFSD2A
subclass of: SO_0000673
so part of: MFSD2A
location: join(692971..693029,696420..696543,696661..696739,697226..697398,697519..697609,698212..698248,698306..698333,698634..698717,699617..699700,699951..700063,700266..700409,700613..700789,701139..701196)
location: region:692971-701196:1
so has part: feature:692971-693029:1:exon
so has part: feature:696420-696543:1:exon
so has part: feature:696661-696739:1:exon
so has part: feature:697226-697398:1:exon
so has part: feature:697519-697609:1:exon
so has part: feature:698212-698248:1:exon
so has part: feature:698306-698333:1:exon
so has part: feature:698634-698717:1:exon
so has part: feature:699617-699700:1:exon
so has part: feature:699951-700063:1:exon
so has part: feature:700266-700409:1:exon
so has part: feature:700613-700789:1:exon
so has part: feature:701139-701196:1:exon

XP_030320257.1
type: Protein
SIO_000068: ncbiprotein

position:692971:1
position: 692971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:692971-693029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:696420-696543:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:696661-696739:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:697226-697398:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:697519-697609:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:698212-698248:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:698306-698333:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:698634-698717:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:699617-699700:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:699951-700063:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:700266-700409:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:700613-700789:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:701139-701196:1:exon

CAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: CAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 707743..721413
location: region:707743-721413:1
so has part: feature:707743-721413:1:exon
subclass of: SO_0000010

103532666
type: Gene
SIO_000068: ncbigene

position:707743:1
position: 707743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:721413:1
position: 721413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:707743-721413:1:exon

CAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CAP1
product: cyclase associated actin cytoskeleton regulatory protein 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 15 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_008498452.2
SIO_010081: CAP1
subclass of: SO_0000673
so part of: CAP1
location: join(707743..707775,713226..713338,713707..713807,714262..714339,715969..716112,716196..716281,716739..716844,716939..717117,717766..717953,718153..718276,718365..718447,718945..719088,719971..721413)
location: region:707743-721413:1
so has part: feature:707743-707775:1:exon
so has part: feature:713226-713338:1:exon
so has part: feature:713707-713807:1:exon
so has part: feature:714262-714339:1:exon
so has part: feature:715969-716112:1:exon
so has part: feature:716196-716281:1:exon
so has part: feature:716739-716844:1:exon
so has part: feature:716939-717117:1:exon
so has part: feature:717766-717953:1:exon
so has part: feature:718153-718276:1:exon
so has part: feature:718365-718447:1:exon
so has part: feature:718945-719088:1:exon
so has part: feature:719971-721413:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:707743-707775:1:exon

position:707775:1
position: 707775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:713226-713338:1:exon

position:713226:1
position: 713226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:713338:1
position: 713338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:713707-713807:1:exon

position:713707:1
position: 713707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:713807:1
position: 713807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:714262-714339:1:exon

position:714262:1
position: 714262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:714339:1
position: 714339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:715969-716112:1:exon

position:715969:1
position: 715969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:716112:1
position: 716112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:716196-716281:1:exon

position:716196:1
position: 716196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:716281:1
position: 716281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:716739-716844:1:exon

position:716739:1
position: 716739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:716844:1
position: 716844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:716939-717117:1:exon

position:716939:1
position: 716939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:717117:1
position: 717117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:717766-717953:1:exon

position:717766:1
position: 717766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:717953:1
position: 717953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:718153-718276:1:exon

position:718153:1
position: 718153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:718276:1
position: 718276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:718365-718447:1:exon

position:718365:1
position: 718365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:718447:1
position: 718447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:718945-719088:1:exon

position:718945:1
position: 718945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:719088:1
position: 719088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:719971-721413:1:exon

position:719971:1
position: 719971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CAP1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: adenylyl cyclase-associated protein 1
translation: MERLVERLEKAVERLETVCQGPGMCGDGSSKGVAQYVQAFDALLAGPVAEYMKISREVGGDVQKHAEMVHAGLMSERALLVMASQHQQPTENAFSSLLKPISEQIQVVQNFREKNRGSKMFNHLSAVSESIPALGWVAMAPKPGPYVKEMTDAAMFYTNRILKEYKDVDKKQVDWVKAYLSIWMELQAYIKEFHTTGLTWSKTGPVATEGGKSPSSPPGGAAPPPPRPSPPPAPAPPSSSPDDSASRSALFAQINRGEGITSGLRHVSDDMKTHKNPALKNQGGPLRSGPKPFTAPKPACNANSFQKTSPKAPALLELEGKKWRVENQENATDLVISDTELKQVVYVFKCTNSTLQIKGKINSITLDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVPTISINKTDGCHVYLSKNSLDCEIVSAKSSEMNVLVPTEGGDFTEFPVPEQFKTVWNGQKLVTTVTEIAG
SIO_010081: CAP1
subclass of: SO_0000673
so part of: CAP1
location: join(713245..713338,713707..713807,714262..714339,715969..716112,716196..716281,716739..716844,716939..717117,717766..717953,718153..718276,718365..718447,718945..719088,719971..720054)
location: region:713245-720054:1
so has part: feature:713245-713338:1:exon
so has part: feature:713707-713807:1:exon
so has part: feature:714262-714339:1:exon
so has part: feature:715969-716112:1:exon
so has part: feature:716196-716281:1:exon
so has part: feature:716739-716844:1:exon
so has part: feature:716939-717117:1:exon
so has part: feature:717766-717953:1:exon
so has part: feature:718153-718276:1:exon
so has part: feature:718365-718447:1:exon
so has part: feature:718945-719088:1:exon
so has part: feature:719971-720054:1:exon

XP_008496674.2
type: Protein
SIO_000068: ncbiprotein

position:713245:1
position: 713245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720054:1
position: 720054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:713245-713338:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:713707-713807:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:714262-714339:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:715969-716112:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:716196-716281:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:716739-716844:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:716939-717117:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:717766-717953:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:718153-718276:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:718365-718447:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:718945-719088:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:719971-720054:1:exon

PPT1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PPT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(721999..723636)
location: region:721999-723636:-1
so has part: feature:721999-723636:-1:exon
subclass of: SO_0000010

103532665
type: Gene
SIO_000068: ncbigene

position:721999:-1
position: 721999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723636:-1
position: 723636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:721999-723636:-1:exon

PPT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PPT1
product: palmitoyl-protein thioesterase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030464437.1
SIO_010081: PPT1
subclass of: SO_0000673
so part of: PPT1
location: complement(join(721999..722202,722636..722707,722787..722885,723317..723407,723501..723636))
location: region:721999-723636:-1
so has part: feature:723501-723636:-1:exon
so has part: feature:723317-723407:-1:exon
so has part: feature:722787-722885:-1:exon
so has part: feature:722636-722707:-1:exon
so has part: feature:721999-722202:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:723501-723636:-1:exon

position:723501:-1
position: 723501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:723317-723407:-1:exon

position:723317:-1
position: 723317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723407:-1
position: 723407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:722787-722885:-1:exon

position:722787:-1
position: 722787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722885:-1
position: 722885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:722636-722707:-1:exon

position:722636:-1
position: 722636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722707:-1
position: 722707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:721999-722202:-1:exon

position:722202:-1
position: 722202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PPT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyl-protein thioesterase 1
translation: MALKNFVMVKFLNDSMVDPPISEWFGFYRSGQAQVTIPLQETSLYKEDRLGLQEMDKAGKLVFLGVEGDHLRFTEEWFYTTILPFLQ
SIO_010081: PPT1
subclass of: SO_0000673
so part of: PPT1
location: complement(join(722080..722202,722636..722707,722787..722855))
location: region:722080-722855:-1
so has part: feature:722787-722855:-1:exon
so has part: feature:722636-722707:-1:exon
so has part: feature:722080-722202:-1:exon

XP_030320297.1
type: Protein
SIO_000068: ncbiprotein

position:722080:-1
position: 722080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722855:-1
position: 722855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:722787-722855:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:722636-722707:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:722080-722202:-1:exon

LOC103535512
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103535512
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <896231..904060
location: region:896231-904060:1
so has part: feature:896231-904060:1:exon
subclass of: SO_0000010

103535512
type: Gene
SIO_000068: ncbigene

position:896231:1
position: 896231
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:904060:1
position: 904060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:896231-904060:1:exon

LOC103535512
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103535512
product: arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030464236.1
SIO_010081: LOC103535512
subclass of: SO_0000673
so part of: LOC103535512
location: join(<896231..896250,896748..896817,897726..897813,898148..898196,898289..898476,898582..898715,899134..899228,899512..899692,900198..900286,900379..900494,900576..900643,900779..900885,900980..901223,901538..901820,902334..902472,902686..902808,903040..904060)
location: region:896231-904060:1
so has part: feature:896231-896250:1:exon
so has part: feature:896748-896817:1:exon
so has part: feature:897726-897813:1:exon
so has part: feature:898148-898196:1:exon
so has part: feature:898289-898476:1:exon
so has part: feature:898582-898715:1:exon
so has part: feature:899134-899228:1:exon
so has part: feature:899512-899692:1:exon
so has part: feature:900198-900286:1:exon
so has part: feature:900379-900494:1:exon
so has part: feature:900576-900643:1:exon
so has part: feature:900779-900885:1:exon
so has part: feature:900980-901223:1:exon
so has part: feature:901538-901820:1:exon
so has part: feature:902334-902472:1:exon
so has part: feature:902686-902808:1:exon
so has part: feature:903040-904060:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:896231-896250:1:exon

position:896250:1
position: 896250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:896748-896817:1:exon

position:896748:1
position: 896748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:896817:1
position: 896817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:897726-897813:1:exon

position:897726:1
position: 897726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:897813:1
position: 897813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:898148-898196:1:exon

position:898148:1
position: 898148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:898196:1
position: 898196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:898289-898476:1:exon

position:898289:1
position: 898289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:898476:1
position: 898476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:898582-898715:1:exon

position:898582:1
position: 898582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:898715:1
position: 898715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:899134-899228:1:exon

position:899134:1
position: 899134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:899228:1
position: 899228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:899512-899692:1:exon

position:899512:1
position: 899512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:899692:1
position: 899692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:900198-900286:1:exon

position:900198:1
position: 900198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:900286:1
position: 900286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:900379-900494:1:exon

position:900379:1
position: 900379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:900494:1
position: 900494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:900576-900643:1:exon

position:900576:1
position: 900576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:900643:1
position: 900643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:900779-900885:1:exon

position:900779:1
position: 900779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:900885:1
position: 900885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:900980-901223:1:exon

position:900980:1
position: 900980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:901223:1
position: 901223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:901538-901820:1:exon

position:901538:1
position: 901538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:901820:1
position: 901820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:902334-902472:1:exon

position:902334:1
position: 902334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:902472:1
position: 902472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:902686-902808:1:exon

position:902686:1
position: 902686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:902808:1
position: 902808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:903040-904060:1:exon

position:903040:1
position: 903040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC103535512
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103535512
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3
translation: LYKKSDGIRKVWQKRKCGVKYGCLTISHSMINRPPVKLNLLTCQVRPHAEEKKCFDLVTHNRTYHFQAEDEQECVVWVSVLQNSKDEALSNAFRGDPSSSGGAAGGGADGGLQDLTKAVITEVKNMAGNRQCCDCGAPDPTWLSTNLGILTCIECSGIHRELGVHYSRIQSLTLDVLSTSELLLAVSIGNTRFNEIMEATLPTQDCPKPSASSDMAARKEFIVAKYMERRYVQRSSPEDPHRLWEAIQTRDLLALLQAFAEGHDLAKPLASPEGQQDPAELALHMAVRQADRSSLPLVDFIIQNGGTLDRVMPDGNTALHYGALYNQPNCLKLLLKGKAAFSTVNAAGETALEVARRLKHTECEELLEQAQAGKLSPQIHVDYDWEPPXEFPYDSEEELEEKVSPLQRSFKGTSPLATTPLPAAPQPRWSCMGMDITNKTYESVLVPSHPTPRRAHSEEIPPPLPLKNPTRGSARPKPGHSPTERPELPRQASDPHFSGVAEVPAWRGLPSASSLGALDTISSPPSTRSPPETRRAAYWETRSETETNGNRRAPELNPPPGQPPPGTTAPDIPPVKFGSGSTRSYRRISGGGGGKVGSPLSPQSPEDPTLSKTPPVPMPRRFAPAKGKQKRVKAVADCKGDKARELTFSKGEVIVVTREEDEQSWVGFIEGDGSRTGVFPASFVHLLQD
SIO_010081: LOC103535512
subclass of: SO_0000673
so part of: LOC103535512
location: join(<896231..896250,896748..896817,897726..897813,898148..898196,898289..898476,898582..898715,899134..899228,899512..899692,900198..900286,900379..900494,900576..900643,900779..900885,900980..901223,901538..901820,902334..902472,902686..902808,903040..903114)
location: region:896231-903114:1
so has part: feature:896231-896250:1:exon
so has part: feature:896748-896817:1:exon
so has part: feature:897726-897813:1:exon
so has part: feature:898148-898196:1:exon
so has part: feature:898289-898476:1:exon
so has part: feature:898582-898715:1:exon
so has part: feature:899134-899228:1:exon
so has part: feature:899512-899692:1:exon
so has part: feature:900198-900286:1:exon
so has part: feature:900379-900494:1:exon
so has part: feature:900576-900643:1:exon
so has part: feature:900779-900885:1:exon
so has part: feature:900980-901223:1:exon
so has part: feature:901538-901820:1:exon
so has part: feature:902334-902472:1:exon
so has part: feature:902686-902808:1:exon
so has part: feature:903040-903114:1:exon

XP_030320096.1
type: Protein
SIO_000068: ncbiprotein

position:903114:1
position: 903114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:896231-896250:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:896748-896817:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:897726-897813:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:898148-898196:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:898289-898476:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:898582-898715:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:899134-899228:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:899512-899692:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:900198-900286:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:900379-900494:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:900576-900643:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:900779-900885:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:900980-901223:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:901538-901820:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:902334-902472:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:902686-902808:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:903040-903114:1:exon

TCEA3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: TCEA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 905175..913867
location: region:905175-913867:1
so has part: feature:905175-913867:1:exon
subclass of: SO_0000010

103535513
type: Gene
SIO_000068: ncbigene

position:905175:1
position: 905175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913867:1
position: 913867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:905175-913867:1:exon

TCEA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TCEA3
product: transcription elongation factor A3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030464421.1
SIO_010081: TCEA3
subclass of: SO_0000673
so part of: TCEA3
location: join(905175..905391,907198..907260,907385..907490,907796..907964,908216..908284,908448..908516,908635..908697,908947..909024,909198..909286,910351..910407,911158..911312,911903..912049,912153..912224,913338..913867)
location: region:905175-913867:1
so has part: feature:905175-905391:1:exon
so has part: feature:907198-907260:1:exon
so has part: feature:907385-907490:1:exon
so has part: feature:907796-907964:1:exon
so has part: feature:908216-908284:1:exon
so has part: feature:908448-908516:1:exon
so has part: feature:908635-908697:1:exon
so has part: feature:908947-909024:1:exon
so has part: feature:909198-909286:1:exon
so has part: feature:910351-910407:1:exon
so has part: feature:911158-911312:1:exon
so has part: feature:911903-912049:1:exon
so has part: feature:912153-912224:1:exon
so has part: feature:913338-913867:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:905175-905391:1:exon

position:905391:1
position: 905391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:907198-907260:1:exon

position:907198:1
position: 907198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:907260:1
position: 907260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:907385-907490:1:exon

position:907385:1
position: 907385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:907490:1
position: 907490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:907796-907964:1:exon

position:907796:1
position: 907796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:907964:1
position: 907964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:908216-908284:1:exon

position:908216:1
position: 908216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:908284:1
position: 908284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:908448-908516:1:exon

position:908448:1
position: 908448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:908516:1
position: 908516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:908635-908697:1:exon

position:908635:1
position: 908635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:908697:1
position: 908697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:908947-909024:1:exon

position:908947:1
position: 908947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:909024:1
position: 909024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:909198-909286:1:exon

position:909198:1
position: 909198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:909286:1
position: 909286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:910351-910407:1:exon

position:910351:1
position: 910351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:910407:1
position: 910407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:911158-911312:1:exon

position:911158:1
position: 911158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:911312:1
position: 911312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:911903-912049:1:exon

position:911903:1
position: 911903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:912049:1
position: 912049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:912153-912224:1:exon

position:912153:1
position: 912153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:912224:1
position: 912224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:913338-913867:1:exon

position:913338:1
position: 913338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TCEA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TCEA3
product: transcription elongation factor A3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_030464420.1
SIO_010081: TCEA3
subclass of: SO_0000673
so part of: TCEA3
location: join(905176..905391,907198..907260,907385..907490,907796..907964,908216..908284,908448..908516,908635..908697,908947..909024,909132..909286,910351..910407,911158..911312,911903..912049,912153..912224,913338..913867)
location: region:905176-913867:1
so has part: feature:905176-905391:1:exon
so has part: feature:907198-907260:1:exon
so has part: feature:907385-907490:1:exon
so has part: feature:907796-907964:1:exon
so has part: feature:908216-908284:1:exon
so has part: feature:908448-908516:1:exon
so has part: feature:908635-908697:1:exon
so has part: feature:908947-909024:1:exon
so has part: feature:909132-909286:1:exon
so has part: feature:910351-910407:1:exon
so has part: feature:911158-911312:1:exon
so has part: feature:911903-912049:1:exon
so has part: feature:912153-912224:1:exon
so has part: feature:913338-913867:1:exon

position:905176:1
position: 905176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:905176-905391:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:907198-907260:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:907385-907490:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:907796-907964:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:908216-908284:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:908448-908516:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:908635-908697:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:908947-909024:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:909132-909286:1:exon

position:909132:1
position: 909132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:910351-910407:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:911158-911312:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:911903-912049:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:912153-912224:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:913338-913867:1:exon

TCEA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TCEA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation factor A protein 3 isoform X1
translation: MGPAEELVRIAKKLDKMVARKSTEGALDLLKSLTSYTMTIQLLQTTRIGVAVNSVRKHCSDEEVVASAKILIKNWKRLLESSAPPKKEKDVDGKKEKETDGEKKEKKGLEFPSCPKEGVKHPKSPAEKQKEKHKERKASRSSSSATTPGGHPGDSIPERESRDGRSPTVSLKKSSSDGKKERSSSTSAISSSASPQKRPSGERRASLGSSPLPAPSASRRNSSDSKEERVNSSKGKAETPRPPSSPSFSPSPCLLAPCYLTGDSVRDKCIEMLTAALRMEDDYKEFGVNCEKMASEIEDHIFQELKSTDMKYRNRVRSRISNLKDPKNPNLRRNVLCGAIPPSLIARMTAEEMASDELKELRNAMTQEAIREHQMAKTGGTVTDLFQCGKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC
SIO_010081: TCEA3
subclass of: SO_0000673
so part of: TCEA3
location: join(905323..905391,907198..907260,907385..907490,907796..907964,908216..908284,908448..908516,908635..908697,908947..909024,909132..909286,910351..910407,911158..911312,911903..912049,912153..912224,913338..913346)
location: region:905323-913346:1
so has part: feature:905323-905391:1:exon
so has part: feature:907198-907260:1:exon
so has part: feature:907385-907490:1:exon
so has part: feature:907796-907964:1:exon
so has part: feature:908216-908284:1:exon
so has part: feature:908448-908516:1:exon
so has part: feature:908635-908697:1:exon
so has part: feature:908947-909024:1:exon
so has part: feature:909132-909286:1:exon
so has part: feature:910351-910407:1:exon
so has part: feature:911158-911312:1:exon
so has part: feature:911903-912049:1:exon
so has part: feature:912153-912224:1:exon
so has part: feature:913338-913346:1:exon

XP_030320280.1
type: Protein
SIO_000068: ncbiprotein

position:905323:1
position: 905323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913346:1
position: 913346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:905323-905391:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:907198-907260:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:907385-907490:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:907796-907964:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:908216-908284:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:908448-908516:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:908635-908697:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:908947-909024:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:909132-909286:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:910351-910407:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:911158-911312:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:911903-912049:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:912153-912224:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:913338-913346:1:exon

TCEA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TCEA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation factor A protein 3 isoform X2
translation: MGPAEELVRIAKKLDKMVARKSTEGALDLLKSLTSYTMTIQLLQTTRIGVAVNSVRKHCSDEEVVASAKILIKNWKRLLESSAPPKKEKDVDGKKEKETDGEKKEKKGLEFPSCPKEGVKHPKSPAEKQKEKHKERKASRSSSSATTPGGHPGDSIPERESRDGRSPTVSLKKSSSDGKKERSSSTSAISSSASPQKRPSGERRASLGSSPLPAPSASRRNSSDSKEESPCLLAPCYLTGDSVRDKCIEMLTAALRMEDDYKEFGVNCEKMASEIEDHIFQELKSTDMKYRNRVRSRISNLKDPKNPNLRRNVLCGAIPPSLIARMTAEEMASDELKELRNAMTQEAIREHQMAKTGGTVTDLFQCGKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC
SIO_010081: TCEA3
subclass of: SO_0000673
so part of: TCEA3
location: join(905323..905391,907198..907260,907385..907490,907796..907964,908216..908284,908448..908516,908635..908697,908947..909024,909198..909286,910351..910407,911158..911312,911903..912049,912153..912224,913338..913346)
location: region:905323-913346:1
so has part: feature:905323-905391:1:exon
so has part: feature:907198-907260:1:exon
so has part: feature:907385-907490:1:exon
so has part: feature:907796-907964:1:exon
so has part: feature:908216-908284:1:exon
so has part: feature:908448-908516:1:exon
so has part: feature:908635-908697:1:exon
so has part: feature:908947-909024:1:exon
so has part: feature:909198-909286:1:exon
so has part: feature:910351-910407:1:exon
so has part: feature:911158-911312:1:exon
so has part: feature:911903-912049:1:exon
so has part: feature:912153-912224:1:exon
so has part: feature:913338-913346:1:exon

XP_030320281.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:905323-905391:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:907198-907260:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:907385-907490:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:907796-907964:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:908216-908284:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:908448-908516:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:908635-908697:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:908947-909024:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:909198-909286:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:910351-910407:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:911158-911312:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:911903-912049:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:912153-912224:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:913338-913346:1:exon

OPRD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: OPRD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 927299..934255
location: region:927299-934255:1
so has part: feature:927299-934255:1:exon
subclass of: SO_0000010

103535477
type: Gene
SIO_000068: ncbigene

position:927299:1
position: 927299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:934255:1
position: 934255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:927299-934255:1:exon

OPRD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: OPRD1
product: opioid receptor delta 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 70 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464366.1
SIO_010081: OPRD1
subclass of: SO_0000673
so part of: OPRD1
location: join(927299..927515,931804..932153,932828..934255)
location: region:927299-934255:1
so has part: feature:927299-927515:1:exon
so has part: feature:931804-932153:1:exon
so has part: feature:932828-934255:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:927299-927515:1:exon

position:927515:1
position: 927515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:931804-932153:1:exon

position:931804:1
position: 931804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:932153:1
position: 932153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:932828-934255:1:exon

position:932828:1
position: 932828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OPRD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: OPRD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: delta-type opioid receptor
translation: MELPTAGGTGWDNGSVWDPLPGPEGNQTGVQRAKGVSSVLIAIVITALYSVVCVVGLLGNLLVMYGIVRYTKMKTATNIYIFNLALADAVATSTLPFQSAKYLMETWPFGELLCKIILSIDYYNMFTSIFTLTMMSVDRYVAVCHPVKALEFRTPAKAKLINVCIWVLSSLIGVPIMIMAVTKSKDGVVLCTLQFPDPPIYWDRVTKICVFIFAFMIPILVITICYGLMILRLKSVRLLSGSKEKDRNLRRITRMVLVVVAAFIICWTPIHIFVMVWTLVDIDKKNPYVVASLHFCIALGYTNSSLNPVLYAFLDENFKRCFREFCLPLRARRDQTTFSRARNTVREGVSTCTPLEAPSNPA
SIO_010081: OPRD1
subclass of: SO_0000673
so part of: OPRD1
location: join(927310..927515,931804..932153,932828..933360)
location: region:927310-933360:1
so has part: feature:927310-927515:1:exon
so has part: feature:931804-932153:1:exon
so has part: feature:932828-933360:1:exon

XP_030320226.1
type: Protein
SIO_000068: ncbiprotein

position:927310:1
position: 927310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:933360:1
position: 933360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:927310-927515:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:931804-932153:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:932828-933360:1:exon

RCC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: RCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(939010..945342)
location: region:939010-945342:-1
so has part: feature:939010-945342:-1:exon
subclass of: SO_0000010

103535478
type: Gene
SIO_000068: ncbigene

position:939010:-1
position: 939010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945342:-1
position: 945342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:939010-945342:-1:exon

RCC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RCC1
product: regulator of chromosome condensation 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_008501535.2
SIO_010081: RCC1
subclass of: SO_0000673
so part of: RCC1
location: complement(join(939010..940219,940880..941032,941376..941495,942163..942318,942573..942695,943219..943315,943407..943586,943942..944129,944227..944311,945246..945342))
location: region:939010-945342:-1
so has part: feature:945246-945342:-1:exon
so has part: feature:944227-944311:-1:exon
so has part: feature:943942-944129:-1:exon
so has part: feature:943407-943586:-1:exon
so has part: feature:943219-943315:-1:exon
so has part: feature:942573-942695:-1:exon
so has part: feature:942163-942318:-1:exon
so has part: feature:941376-941495:-1:exon
so has part: feature:940880-941032:-1:exon
so has part: feature:939010-940219:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:945246-945342:-1:exon

position:945246:-1
position: 945246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:944227-944311:-1:exon

position:944227:-1
position: 944227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:944311:-1
position: 944311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:943942-944129:-1:exon

position:943942:-1
position: 943942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:944129:-1
position: 944129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:943407-943586:-1:exon

position:943407:-1
position: 943407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:943586:-1
position: 943586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:943219-943315:-1:exon

position:943219:-1
position: 943219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:943315:-1
position: 943315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:942573-942695:-1:exon

position:942573:-1
position: 942573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:942695:-1
position: 942695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:942163-942318:-1:exon

position:942163:-1
position: 942163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:942318:-1
position: 942318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:941376-941495:-1:exon

position:941376:-1
position: 941376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:941495:-1
position: 941495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:940880-941032:-1:exon

position:940880:-1
position: 940880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:941032:-1
position: 941032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:939010-940219:-1:exon

position:940219:-1
position: 940219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RCC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of chromosome condensation
translation: MPGKRAGKKSPVPEDKAPERKKIKICHPSHRTQPGLVLTVGQGDVGQLGLGEEVMERKKPALVQLPEMVVQVEAGGMHTVCLSQTGKIYTFGCNDEGALGRDTSAEGSEATPGLVELQEKVVQVSAGDSHTAALTEDGRVFVWGSFRDNNGVIGLLEPMKTSSIPLLLQLGVPVVKIVSGNDHLVMLTVDGELFTCGCGEQGQLGRVPALFANRGGRKGLERLLVPQRVPVKGKGNRGKIRFQDVFCGAYVTFAVTQEGHIYGFGLSNYHQLGTQSTEPCFSPQNLTCFKNSTKSWVGFSGGQHHTLCVDSEGKAYSLGRAEYGRLGLGAGAEEKSTPTLIPELPNISSVACGASVGYAVSSDGRAFAWGMGTNYQLGTGEEEDVLSPLEMTGKQLENRRVLAVSSGGQHTVLLVQDKEQS
SIO_010081: RCC1
subclass of: SO_0000673
so part of: RCC1
location: complement(join(940044..940219,940880..941032,941376..941495,942163..942318,942573..942695,943219..943315,943407..943586,943942..944129,944227..944299))
location: region:940044-944299:-1
so has part: feature:944227-944299:-1:exon
so has part: feature:943942-944129:-1:exon
so has part: feature:943407-943586:-1:exon
so has part: feature:943219-943315:-1:exon
so has part: feature:942573-942695:-1:exon
so has part: feature:942163-942318:-1:exon
so has part: feature:941376-941495:-1:exon
so has part: feature:940880-941032:-1:exon
so has part: feature:940044-940219:-1:exon

XP_008499757.1
type: Protein
SIO_000068: ncbiprotein

position:940044:-1
position: 940044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:944299:-1
position: 944299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:944227-944299:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:943942-944129:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:943407-943586:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:943219-943315:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:942573-942695:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:942163-942318:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:941376-941495:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:940880-941032:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:940044-940219:-1:exon

LOC115599594
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599594
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(947581..947786)
location: region:947581-947786:-1
so has part: feature:947581-947786:-1:exon
subclass of: SO_0000578

115599594
type: Gene
SIO_000068: ncbigene

position:947581:-1
position: 947581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:947786:-1
position: 947786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:947581-947786:-1:exon

LOC115599594
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: snoRNA
gene: LOC115599594
product: small nucleolar RNA SNORA73 family
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00045
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003988520.1
SIO_010081: LOC115599594
subclass of: SO_0000673
so part of: LOC115599594
location: complement(947581..947786)
location: region:947581-947786:-1
so has part: feature:947581-947786:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:947581-947786:-1:exon

PHACTR4
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PHACTR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(948597..1018228)
location: region:948597-1018228:-1
so has part: feature:948597-1018228:-1:exon
subclass of: SO_0000010

103535514
type: Gene
SIO_000068: ncbigene

position:948597:-1
position: 948597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1018228:-1
position: 1018228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:948597-1018228:-1:exon

PHACTR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PHACTR4
product: phosphatase and actin regulator 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030464456.1
SIO_010081: PHACTR4
subclass of: SO_0000673
so part of: PHACTR4
location: complement(join(948597..950184,950729..950805,951736..951873,952716..952777,953725..953780,954339..954489,954860..955077,955633..956215,960302..960664,960793..960957,963394..963474,963926..964105,995297..995343,1018143..1018228))
location: region:948597-1018228:-1
so has part: feature:1018143-1018228:-1:exon
so has part: feature:995297-995343:-1:exon
so has part: feature:963926-964105:-1:exon
so has part: feature:963394-963474:-1:exon
so has part: feature:960793-960957:-1:exon
so has part: feature:960302-960664:-1:exon
so has part: feature:955633-956215:-1:exon
so has part: feature:954860-955077:-1:exon
so has part: feature:954339-954489:-1:exon
so has part: feature:953725-953780:-1:exon
so has part: feature:952716-952777:-1:exon
so has part: feature:951736-951873:-1:exon
so has part: feature:950729-950805:-1:exon
so has part: feature:948597-950184:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1018143-1018228:-1:exon

position:1018143:-1
position: 1018143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:995297-995343:-1:exon

position:995297:-1
position: 995297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:995343:-1
position: 995343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:963926-964105:-1:exon

position:963926:-1
position: 963926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:964105:-1
position: 964105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:963394-963474:-1:exon

position:963394:-1
position: 963394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:963474:-1
position: 963474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:960793-960957:-1:exon

position:960793:-1
position: 960793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:960957:-1
position: 960957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:960302-960664:-1:exon

position:960302:-1
position: 960302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:960664:-1
position: 960664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:955633-956215:-1:exon

position:955633:-1
position: 955633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:956215:-1
position: 956215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:954860-955077:-1:exon

position:954860:-1
position: 954860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:955077:-1
position: 955077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:954339-954489:-1:exon

position:954339:-1
position: 954339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:954489:-1
position: 954489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:953725-953780:-1:exon

position:953725:-1
position: 953725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:953780:-1
position: 953780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:952716-952777:-1:exon

position:952716:-1
position: 952716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:952777:-1
position: 952777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:951736-951873:-1:exon

position:951736:-1
position: 951736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:951873:-1
position: 951873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:950729-950805:-1:exon

position:950729:-1
position: 950729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:950805:-1
position: 950805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:948597-950184:-1:exon

position:950184:-1
position: 950184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PHACTR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PHACTR4
product: phosphatase and actin regulator 4, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464462.1
SIO_010081: PHACTR4
subclass of: SO_0000673
so part of: PHACTR4
location: complement(join(948597..950184,950729..950805,951736..951873,952716..952777,953725..953780,954339..954489,954860..955077,955633..956215,960302..960664,960793..960957,963394..963474,963926..964105,993531..993601,995297..995343,1018143..1018200))
location: region:948597-1018200:-1
so has part: feature:1018143-1018200:-1:exon
so has part: feature:995297-995343:-1:exon
so has part: feature:993531-993601:-1:exon
so has part: feature:963926-964105:-1:exon
so has part: feature:963394-963474:-1:exon
so has part: feature:960793-960957:-1:exon
so has part: feature:960302-960664:-1:exon
so has part: feature:955633-956215:-1:exon
so has part: feature:954860-955077:-1:exon
so has part: feature:954339-954489:-1:exon
so has part: feature:953725-953780:-1:exon
so has part: feature:952716-952777:-1:exon
so has part: feature:951736-951873:-1:exon
so has part: feature:950729-950805:-1:exon
so has part: feature:948597-950184:-1:exon

position:1018200:-1
position: 1018200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1018143-1018200:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:995297-995343:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:993531-993601:-1:exon

position:993531:-1
position: 993531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:993601:-1
position: 993601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:963926-964105:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:963394-963474:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:960793-960957:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:960302-960664:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:955633-956215:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:954860-955077:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:954339-954489:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:953725-953780:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:952716-952777:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:951736-951873:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:950729-950805:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:948597-950184:-1:exon

PHACTR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PHACTR4
product: phosphatase and actin regulator 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030464453.1
SIO_010081: PHACTR4
subclass of: SO_0000673
so part of: PHACTR4
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PHACTR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PHACTR4
product: phosphatase and actin regulator 4, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030464461.1
SIO_010081: PHACTR4
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PHACTR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PHACTR4
product: phosphatase and actin regulator 4, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464458.1
SIO_010081: PHACTR4
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PHACTR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PHACTR4
product: phosphatase and actin regulator 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464454.1
SIO_010081: PHACTR4
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PHACTR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PHACTR4
product: phosphatase and actin regulator 4, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464460.1
SIO_010081: PHACTR4
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PHACTR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PHACTR4
product: phosphatase and actin regulator 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464457.1
SIO_010081: PHACTR4
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PHACTR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PHACTR4
product: phosphatase and actin regulator 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030464455.1
SIO_010081: PHACTR4
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PHACTR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PHACTR4
product: phosphatase and actin regulator 4, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464463.1
SIO_010081: PHACTR4
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so has part: feature:952716-952777:-1:exon
so has part: feature:951736-951873:-1:exon
so has part: feature:950729-950805:-1:exon
so has part: feature:948597-950184:-1:exon

position:964728:-1
position: 964728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:964710-964728:-1:exon

position:964710:-1
position: 964710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:963926-964105:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:963394-963474:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:960793-960957:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:960302-960664:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:955633-956215:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:954860-955077:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:954339-954489:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:953725-953780:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:952716-952777:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:951736-951873:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:950729-950805:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:948597-950184:-1:exon

PHACTR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PHACTR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatase and actin regulator 4 isoform X2
translation: MDSRNCWESQCARGMEENTAEEFDRHLPSDATMGVDVLESGDTTPPTKRKSKFSGFGKIFKPWKWRKKKSSDKFKETSEVLERKISMRKPREELVKRGVLLEDPEQDGEDSDKLNPPALKNGHTVPIGGPGVGNLASQEEDATKPSSLRKPVPAEEPKNRQGSSSSHSGPELEPPQDLYVPRQPLLPPKRPPPTSQEGTEAPAKDPTPSCSTAKTAPSSTAPVVTKTVTNPTAAPSPAPRTLPPALASANTTAPTSTTSTAPAKQPPVPPPKPVNRNSTSVIAELSQAITSGTTLSKPSPPLPPKRGLLPNTTPDAALPSKPPSDRTVPAPRPALLPMHITSVYPPPSPSPPLPTHIPPEPPRMPLPLSTPVLDPPRSLDLPKETPPPPPEDFKSLEVSKRTAEQGFGDPPLLPRLPQLPLHIRIQQALASPLPVTPPPEGSHRAHSLLFENDGFGEDNNTLGRTRSLPVTIEMLKVPDDEEEDDQEEEQNPGPRVYIGDVPSVTIIPKLVPQVLPEEQEGDEGMSDSDSEGPILYKDEEDEEEDESHNSTLANKVKRKDTLAIKLGNTTIAQEEKVVFPRKSKEEWNEIRQQIGTTLIRRLSQRPTAEELEQRNILQPKNEADRQAEKREIKRRLTRKLSQRPTVAELQARKILRFNEYVEVTDAQDYDRRADKPWTKLTPADKAAIRKELNEFKSCEMEVHEDSKQFTRYHRP
SIO_010081: PHACTR4
subclass of: SO_0000673
so part of: PHACTR4
location: complement(join(950169..950184,950729..950805,951736..951873,952716..952777,953725..953780,954339..954489,954860..955077,955633..956215,960302..960664,960793..960957,963394..963474,963926..964105,995297..995343,1015118..1015128))
location: region:950169-1015128:-1
so has part: feature:1015118-1015128:-1:exon
so has part: feature:995297-995343:-1:exon
so has part: feature:963926-964105:-1:exon
so has part: feature:963394-963474:-1:exon
so has part: feature:960793-960957:-1:exon
so has part: feature:960302-960664:-1:exon
so has part: feature:955633-956215:-1:exon
so has part: feature:954860-955077:-1:exon
so has part: feature:954339-954489:-1:exon
so has part: feature:953725-953780:-1:exon
so has part: feature:952716-952777:-1:exon
so has part: feature:951736-951873:-1:exon
so has part: feature:950729-950805:-1:exon
so has part: feature:950169-950184:-1:exon

XP_030320314.1
type: Protein
SIO_000068: ncbiprotein

position:950169:-1
position: 950169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1015128:-1
position: 1015128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1015118-1015128:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:995297-995343:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:963926-964105:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:963394-963474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:960793-960957:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:960302-960664:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:955633-956215:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:954860-955077:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:954339-954489:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:953725-953780:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:952716-952777:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:951736-951873:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:950729-950805:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:950169-950184:-1:exon

PHACTR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PHACTR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatase and actin regulator 4 isoform X4
translation: MEENTAEEFDRHLPSDATMGVDVLESGDTTPPTKRKSKFSGFGKIFKPWKWRKKKSSDKFKETSEVLERKISMRKPREELVKRGVLLEDPEQDGEDSDKLNPPALKNGHTVPIGGPGVGNLASQEEDATKPSSLRKPVPAEEPKNRQGSSSSHSGPELEPPQDLYVPRQPLLPPKRPPPTSQEGTEAPAKDPTPSCSTAKTAPSSTAPVVTKTVTNPTAAPSPAPRTLPPALASANTTAPTSTTSTAPAKQPPVPPPKPVNRNSTSVIAELSQAITSGTTLSKPSPPLPPKRGLLPNTTPDAALPSKPPSDRTVPAPRPALLPMHITSVYPPPSPSPPLPTHIPPEPPRMPLPLSTPVLDPPRSLDLPKETPPPPPEDFKSLEVSKRTAEQGFGDPPLLPRLPQLPLHIRIQQALASPLPVTPPPEGSHRAHSLLFENDGFGEDNNTLGRTRSLPVTIEMLKVPDDEEEDDQEEEQNPGPRVYIGDVPSVTIIPKLVPQVLPEEQEGDEGMSDSDSEGPILYKDEEDEEEDESHNSTLANKVKRKDTLAIKLGNTTIAQEEKVVFPRKSKEEWNEIRQQIGTTLIRRLSQRPTAEELEQRNILQPKNEADRQAEKREIKRRLTRKLSQRPTVAELQARKILRFNEYVEVTDAQDYDRRADKPWTKLTPADKAAIRKELNEFKSCEMEVHEDSKQFTRYHRP
SIO_010081: PHACTR4
subclass of: SO_0000673
so part of: PHACTR4
location: complement(join(950169..950184,950729..950805,951736..951873,952716..952777,953725..953780,954339..954489,954860..955077,955633..956215,960302..960664,960793..960957,963394..963474,963926..964105,995297..995312))
location: region:950169-995312:-1
so has part: feature:995297-995312:-1:exon
so has part: feature:963926-964105:-1:exon
so has part: feature:963394-963474:-1:exon
so has part: feature:960793-960957:-1:exon
so has part: feature:960302-960664:-1:exon
so has part: feature:955633-956215:-1:exon
so has part: feature:954860-955077:-1:exon
so has part: feature:954339-954489:-1:exon
so has part: feature:953725-953780:-1:exon
so has part: feature:952716-952777:-1:exon
so has part: feature:951736-951873:-1:exon
so has part: feature:950729-950805:-1:exon
so has part: feature:950169-950184:-1:exon

XP_030320316.1
type: Protein
SIO_000068: ncbiprotein

position:995312:-1
position: 995312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:995297-995312:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:963926-964105:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:963394-963474:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:960793-960957:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:960302-960664:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:955633-956215:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:954860-955077:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:954339-954489:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:953725-953780:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:952716-952777:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:951736-951873:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:950729-950805:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:950169-950184:-1:exon

PHACTR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PHACTR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatase and actin regulator 4 isoform X4
translation: MEENTAEEFDRHLPSDATMGVDVLESGDTTPPTKRKSKFSGFGKIFKPWKWRKKKSSDKFKETSEVLERKISMRKPREELVKRGVLLEDPEQDGEDSDKLNPPALKNGHTVPIGGPGVGNLASQEEDATKPSSLRKPVPAEEPKNRQGSSSSHSGPELEPPQDLYVPRQPLLPPKRPPPTSQEGTEAPAKDPTPSCSTAKTAPSSTAPVVTKTVTNPTAAPSPAPRTLPPALASANTTAPTSTTSTAPAKQPPVPPPKPVNRNSTSVIAELSQAITSGTTLSKPSPPLPPKRGLLPNTTPDAALPSKPPSDRTVPAPRPALLPMHITSVYPPPSPSPPLPTHIPPEPPRMPLPLSTPVLDPPRSLDLPKETPPPPPEDFKSLEVSKRTAEQGFGDPPLLPRLPQLPLHIRIQQALASPLPVTPPPEGSHRAHSLLFENDGFGEDNNTLGRTRSLPVTIEMLKVPDDEEEDDQEEEQNPGPRVYIGDVPSVTIIPKLVPQVLPEEQEGDEGMSDSDSEGPILYKDEEDEEEDESHNSTLANKVKRKDTLAIKLGNTTIAQEEKVVFPRKSKEEWNEIRQQIGTTLIRRLSQRPTAEELEQRNILQPKNEADRQAEKREIKRRLTRKLSQRPTVAELQARKILRFNEYVEVTDAQDYDRRADKPWTKLTPADKAAIRKELNEFKSCEMEVHEDSKQFTRYHRP
SIO_010081: PHACTR4
subclass of: SO_0000673
so part of: PHACTR4
location: complement(join(950169..950184,950729..950805,951736..951873,952716..952777,953725..953780,954339..954489,954860..955077,955633..956215,960302..960664,960793..960957,963394..963474,963926..964105,995297..995312))
location: region:950169-995312:-1
so has part: feature:995297-995312:-1:exon
so has part: feature:963926-964105:-1:exon
so has part: feature:963394-963474:-1:exon
so has part: feature:960793-960957:-1:exon
so has part: feature:960302-960664:-1:exon
so has part: feature:955633-956215:-1:exon
so has part: feature:954860-955077:-1:exon
so has part: feature:954339-954489:-1:exon
so has part: feature:953725-953780:-1:exon
so has part: feature:952716-952777:-1:exon
so has part: feature:951736-951873:-1:exon
so has part: feature:950729-950805:-1:exon
so has part: feature:950169-950184:-1:exon

XP_030320317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:995297-995312:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:963926-964105:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:963394-963474:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:960793-960957:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:960302-960664:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:955633-956215:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:954860-955077:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:954339-954489:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:953725-953780:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:952716-952777:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:951736-951873:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:950729-950805:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:950169-950184:-1:exon

PHACTR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PHACTR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatase and actin regulator 4 isoform X4
translation: MEENTAEEFDRHLPSDATMGVDVLESGDTTPPTKRKSKFSGFGKIFKPWKWRKKKSSDKFKETSEVLERKISMRKPREELVKRGVLLEDPEQDGEDSDKLNPPALKNGHTVPIGGPGVGNLASQEEDATKPSSLRKPVPAEEPKNRQGSSSSHSGPELEPPQDLYVPRQPLLPPKRPPPTSQEGTEAPAKDPTPSCSTAKTAPSSTAPVVTKTVTNPTAAPSPAPRTLPPALASANTTAPTSTTSTAPAKQPPVPPPKPVNRNSTSVIAELSQAITSGTTLSKPSPPLPPKRGLLPNTTPDAALPSKPPSDRTVPAPRPALLPMHITSVYPPPSPSPPLPTHIPPEPPRMPLPLSTPVLDPPRSLDLPKETPPPPPEDFKSLEVSKRTAEQGFGDPPLLPRLPQLPLHIRIQQALASPLPVTPPPEGSHRAHSLLFENDGFGEDNNTLGRTRSLPVTIEMLKVPDDEEEDDQEEEQNPGPRVYIGDVPSVTIIPKLVPQVLPEEQEGDEGMSDSDSEGPILYKDEEDEEEDESHNSTLANKVKRKDTLAIKLGNTTIAQEEKVVFPRKSKEEWNEIRQQIGTTLIRRLSQRPTAEELEQRNILQPKNEADRQAEKREIKRRLTRKLSQRPTVAELQARKILRFNEYVEVTDAQDYDRRADKPWTKLTPADKAAIRKELNEFKSCEMEVHEDSKQFTRYHRP
SIO_010081: PHACTR4
subclass of: SO_0000673
so part of: PHACTR4
location: complement(join(950169..950184,950729..950805,951736..951873,952716..952777,953725..953780,954339..954489,954860..955077,955633..956215,960302..960664,960793..960957,963394..963474,963926..964105,995297..995312))
location: region:950169-995312:-1
so has part: feature:995297-995312:-1:exon
so has part: feature:963926-964105:-1:exon
so has part: feature:963394-963474:-1:exon
so has part: feature:960793-960957:-1:exon
so has part: feature:960302-960664:-1:exon
so has part: feature:955633-956215:-1:exon
so has part: feature:954860-955077:-1:exon
so has part: feature:954339-954489:-1:exon
so has part: feature:953725-953780:-1:exon
so has part: feature:952716-952777:-1:exon
so has part: feature:951736-951873:-1:exon
so has part: feature:950729-950805:-1:exon
so has part: feature:950169-950184:-1:exon

XP_030320318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:995297-995312:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:963926-964105:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:963394-963474:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:960793-960957:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:960302-960664:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:955633-956215:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:954860-955077:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:954339-954489:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:953725-953780:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:952716-952777:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:951736-951873:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:950729-950805:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:950169-950184:-1:exon

PHACTR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PHACTR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatase and actin regulator 4 isoform X4
translation: MEENTAEEFDRHLPSDATMGVDVLESGDTTPPTKRKSKFSGFGKIFKPWKWRKKKSSDKFKETSEVLERKISMRKPREELVKRGVLLEDPEQDGEDSDKLNPPALKNGHTVPIGGPGVGNLASQEEDATKPSSLRKPVPAEEPKNRQGSSSSHSGPELEPPQDLYVPRQPLLPPKRPPPTSQEGTEAPAKDPTPSCSTAKTAPSSTAPVVTKTVTNPTAAPSPAPRTLPPALASANTTAPTSTTSTAPAKQPPVPPPKPVNRNSTSVIAELSQAITSGTTLSKPSPPLPPKRGLLPNTTPDAALPSKPPSDRTVPAPRPALLPMHITSVYPPPSPSPPLPTHIPPEPPRMPLPLSTPVLDPPRSLDLPKETPPPPPEDFKSLEVSKRTAEQGFGDPPLLPRLPQLPLHIRIQQALASPLPVTPPPEGSHRAHSLLFENDGFGEDNNTLGRTRSLPVTIEMLKVPDDEEEDDQEEEQNPGPRVYIGDVPSVTIIPKLVPQVLPEEQEGDEGMSDSDSEGPILYKDEEDEEEDESHNSTLANKVKRKDTLAIKLGNTTIAQEEKVVFPRKSKEEWNEIRQQIGTTLIRRLSQRPTAEELEQRNILQPKNEADRQAEKREIKRRLTRKLSQRPTVAELQARKILRFNEYVEVTDAQDYDRRADKPWTKLTPADKAAIRKELNEFKSCEMEVHEDSKQFTRYHRP
SIO_010081: PHACTR4
subclass of: SO_0000673
so part of: PHACTR4
location: complement(join(950169..950184,950729..950805,951736..951873,952716..952777,953725..953780,954339..954489,954860..955077,955633..956215,960302..960664,960793..960957,963394..963474,963926..964105,995297..995312))
location: region:950169-995312:-1
so has part: feature:995297-995312:-1:exon
so has part: feature:963926-964105:-1:exon
so has part: feature:963394-963474:-1:exon
so has part: feature:960793-960957:-1:exon
so has part: feature:960302-960664:-1:exon
so has part: feature:955633-956215:-1:exon
so has part: feature:954860-955077:-1:exon
so has part: feature:954339-954489:-1:exon
so has part: feature:953725-953780:-1:exon
so has part: feature:952716-952777:-1:exon
so has part: feature:951736-951873:-1:exon
so has part: feature:950729-950805:-1:exon
so has part: feature:950169-950184:-1:exon

XP_030320320.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:995297-995312:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:963926-964105:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:963394-963474:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:960793-960957:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:960302-960664:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:955633-956215:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:954860-955077:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:954339-954489:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:953725-953780:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:952716-952777:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:951736-951873:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:950729-950805:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:950169-950184:-1:exon

PHACTR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PHACTR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatase and actin regulator 4 isoform X5
translation: MLIPEDQWKRGLQAAAVKFQSLSLRGYFRTAEEFDRHLPSDATMGVDVLESGDTTPPTKRKSKFSGFGKIFKPWKWRKKKSSDKFKETSEDGEDSDKLNPPALKNGHTVPIGGPGVGNLASQEEDATKPSSLRKPVPAEEPKNRQGSSSSHSGPELEPPQDLYVPRQPLLPPKRPPPTSQEGTEAPAKDPTPSCSTAKTAPSSTAPVVTKTVTNPTAAPSPAPRTLPPALASANTTAPTSTTSTAPAKQPPVPPPKPVNRNSTSVIAELSQAITSGTTLSKPSPPLPPKRGLLPNTTPDAALPSKPPSDRTVPAPRPALLPMHITSVYPPPSPSPPLPTHIPPEPPRMPLPLSTPVLDPPRSLDLPKETPPPPPEDFKSLEVSKRTAEQGFGDPPLLPRLPQLPLHIRIQQALASPLPVTPPPEGSHRAHSLLFENDGFGEDNNTLGRTRSLPVTIEMLKVPDDEEEDDQEEEQNPGPRVYIGDVPSVTIIPKLVPQVLPEEQEGDEGMSDSDSEGPILYKDEEDEEEDESHNSTLANKVKRKDTLAIKLGNTTIAQEEKVVFPRKSKEEWNEIRQQIGTTLIRRLSQRPTAEELEQRNILQPKNEADRQAEKREIKRRLTRKLSQRPTVAELQARKILRFNEYVEVTDAQDYDRRADKPWTKLTPADKAAIRKELNEFKSCEMEVHEDSKQFTRYHRP
SIO_010081: PHACTR4
subclass of: SO_0000673
so part of: PHACTR4
location: complement(join(950169..950184,950729..950805,951736..951873,952716..952777,953725..953780,954339..954489,954860..955077,955633..956215,960302..960664,960793..960957,963926..964105,993105..993195))
location: region:950169-993195:-1
so has part: feature:993105-993195:-1:exon
so has part: feature:963926-964105:-1:exon
so has part: feature:960793-960957:-1:exon
so has part: feature:960302-960664:-1:exon
so has part: feature:955633-956215:-1:exon
so has part: feature:954860-955077:-1:exon
so has part: feature:954339-954489:-1:exon
so has part: feature:953725-953780:-1:exon
so has part: feature:952716-952777:-1:exon
so has part: feature:951736-951873:-1:exon
so has part: feature:950729-950805:-1:exon
so has part: feature:950169-950184:-1:exon

XP_030320321.1
type: Protein
SIO_000068: ncbiprotein

position:993195:-1
position: 993195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:993105-993195:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:963926-964105:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:960793-960957:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:960302-960664:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:955633-956215:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:954860-955077:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:954339-954489:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:953725-953780:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:952716-952777:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:951736-951873:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:950729-950805:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:950169-950184:-1:exon

PHACTR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PHACTR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatase and actin regulator 4 isoform X1
translation: MLIPEDQWKRGLQAAAVKFQSLSLRGYFRTAEEFDRHLPSDATMGVDVLESGDTTPPTKRKSKFSGFGKIFKPWKWRKKKSSDKFKETSEVLERKISMRKPREELVKRGVLLEDPEQDGEDSDKLNPPALKNGHTVPIGGPGVGNLASQEEDATKPSSLRKPVPAEEPKNRQGSSSSHSGPELEPPQDLYVPRQPLLPPKRPPPTSQEGTEAPAKDPTPSCSTAKTAPSSTAPVVTKTVTNPTAAPSPAPRTLPPALASANTTAPTSTTSTAPAKQPPVPPPKPVNRNSTSVIAELSQAITSGTTLSKPSPPLPPKRGLLPNTTPDAALPSKPPSDRTVPAPRPALLPMHITSVYPPPSPSPPLPTHIPPEPPRMPLPLSTPVLDPPRSLDLPKETPPPPPEDFKSLEVSKRTAEQGFGDPPLLPRLPQLPLHIRIQQALASPLPVTPPPEGSHRAHSLLFENDGFGEDNNTLGRTRSLPVTIEMLKVPDDEEEDDQEEEQNPGPRVYIGDVPSVTIIPKLVPQVLPEEQEGDEGMSDSDSEGPILYKDEEDEEEDESHNSTLANKVKRKDTLAIKLGNTTIAQEEKVVFPRKSKEEWNEIRQQIGTTLIRRLSQRPTAEELEQRNILQPKNEADRQAEKREIKRRLTRKLSQRPTVAELQARKILRFNEYVEVTDAQDYDRRADKPWTKLTPADKAAIRKELNEFKSCEMEVHEDSKQFTRYHRP
SIO_010081: PHACTR4
subclass of: SO_0000673
so part of: PHACTR4
location: complement(join(950169..950184,950729..950805,951736..951873,952716..952777,953725..953780,954339..954489,954860..955077,955633..956215,960302..960664,960793..960957,963394..963474,963926..964105,993105..993195))
location: region:950169-993195:-1
so has part: feature:993105-993195:-1:exon
so has part: feature:963926-964105:-1:exon
so has part: feature:963394-963474:-1:exon
so has part: feature:960793-960957:-1:exon
so has part: feature:960302-960664:-1:exon
so has part: feature:955633-956215:-1:exon
so has part: feature:954860-955077:-1:exon
so has part: feature:954339-954489:-1:exon
so has part: feature:953725-953780:-1:exon
so has part: feature:952716-952777:-1:exon
so has part: feature:951736-951873:-1:exon
so has part: feature:950729-950805:-1:exon
so has part: feature:950169-950184:-1:exon

XP_030320313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:993105-993195:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:963926-964105:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:963394-963474:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:960793-960957:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:960302-960664:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:955633-956215:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:954860-955077:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:954339-954489:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:953725-953780:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:952716-952777:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:951736-951873:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:950729-950805:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:950169-950184:-1:exon

PHACTR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PHACTR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatase and actin regulator 4 isoform X3
translation: MGQPHFSRPVNPAASAEEFDRHLPSDATMGVDVLESGDTTPPTKRKSKFSGFGKIFKPWKWRKKKSSDKFKETSEVLERKISMRKPREELVKRGVLLEDPEQDGEDSDKLNPPALKNGHTVPIGGPGVGNLASQEEDATKPSSLRKPVPAEEPKNRQGSSSSHSGPELEPPQDLYVPRQPLLPPKRPPPTSQEGTEAPAKDPTPSCSTAKTAPSSTAPVVTKTVTNPTAAPSPAPRTLPPALASANTTAPTSTTSTAPAKQPPVPPPKPVNRNSTSVIAELSQAITSGTTLSKPSPPLPPKRGLLPNTTPDAALPSKPPSDRTVPAPRPALLPMHITSVYPPPSPSPPLPTHIPPEPPRMPLPLSTPVLDPPRSLDLPKETPPPPPEDFKSLEVSKRTAEQGFGDPPLLPRLPQLPLHIRIQQALASPLPVTPPPEGSHRAHSLLFENDGFGEDNNTLGRTRSLPVTIEMLKVPDDEEEDDQEEEQNPGPRVYIGDVPSVTIIPKLVPQVLPEEQEGDEGMSDSDSEGPILYKDEEDEEEDESHNSTLANKVKRKDTLAIKLGNTTIAQEEKVVFPRKSKEEWNEIRQQIGTTLIRRLSQRPTAEELEQRNILQPKNEADRQAEKREIKRRLTRKLSQRPTVAELQARKILRFNEYVEVTDAQDYDRRADKPWTKLTPADKAAIRKELNEFKSCEMEVHEDSKQFTRYHRP
SIO_010081: PHACTR4
subclass of: SO_0000673
so part of: PHACTR4
location: complement(join(950169..950184,950729..950805,951736..951873,952716..952777,953725..953780,954339..954489,954860..955077,955633..956215,960302..960664,960793..960957,963394..963474,963926..964105,973026..973071))
location: region:950169-973071:-1
so has part: feature:973026-973071:-1:exon
so has part: feature:963926-964105:-1:exon
so has part: feature:963394-963474:-1:exon
so has part: feature:960793-960957:-1:exon
so has part: feature:960302-960664:-1:exon
so has part: feature:955633-956215:-1:exon
so has part: feature:954860-955077:-1:exon
so has part: feature:954339-954489:-1:exon
so has part: feature:953725-953780:-1:exon
so has part: feature:952716-952777:-1:exon
so has part: feature:951736-951873:-1:exon
so has part: feature:950729-950805:-1:exon
so has part: feature:950169-950184:-1:exon

XP_030320315.1
type: Protein
SIO_000068: ncbiprotein

position:973071:-1
position: 973071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:973026-973071:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:963926-964105:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:963394-963474:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:960793-960957:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:960302-960664:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:955633-956215:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:954860-955077:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:954339-954489:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:953725-953780:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:952716-952777:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:951736-951873:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:950729-950805:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:950169-950184:-1:exon

PHACTR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PHACTR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatase and actin regulator 4 isoform X6
translation: MGVDVLESGDTTPPTKRKSKFSGFGKIFKPWKWRKKKSSDKFKETSEVLERKISMRKPREELVKRGVLLEDPEQDGEDSDKLNPPALKNGHTVPIGGPGVGNLASQEEDATKPSSLRKPVPAEEPKNRQGSSSSHSGPELEPPQDLYVPRQPLLPPKRPPPTSQEGTEAPAKDPTPSCSTAKTAPSSTAPVVTKTVTNPTAAPSPAPRTLPPALASANTTAPTSTTSTAPAKQPPVPPPKPVNRNSTSVIAELSQAITSGTTLSKPSPPLPPKRGLLPNTTPDAALPSKPPSDRTVPAPRPALLPMHITSVYPPPSPSPPLPTHIPPEPPRMPLPLSTPVLDPPRSLDLPKETPPPPPEDFKSLEVSKRTAEQGFGDPPLLPRLPQLPLHIRIQQALASPLPVTPPPEGSHRAHSLLFENDGFGEDNNTLGRTRSLPVTIEMLKVPDDEEEDDQEEEQNPGPRVYIGDVPSVTIIPKLVPQVLPEEQEGDEGMSDSDSEGPILYKDEEDEEEDESHNSTLANKVKRKDTLAIKLGNTTIAQEEKVVFPRKSKEEWNEIRQQIGTTLIRRLSQRPTAEELEQRNILQPKNEADRQAEKREIKRRLTRKLSQRPTVAELQARKILRFNEYVEVTDAQDYDRRADKPWTKLTPADKAAIRKELNEFKSCEMEVHEDSKQFTRYHRP
SIO_010081: PHACTR4
subclass of: SO_0000673
so part of: PHACTR4
location: complement(join(950169..950184,950729..950805,951736..951873,952716..952777,953725..953780,954339..954489,954860..955077,955633..956215,960302..960664,960793..960957,963394..963474,963926..964067))
location: region:950169-964067:-1
so has part: feature:963926-964067:-1:exon
so has part: feature:963394-963474:-1:exon
so has part: feature:960793-960957:-1:exon
so has part: feature:960302-960664:-1:exon
so has part: feature:955633-956215:-1:exon
so has part: feature:954860-955077:-1:exon
so has part: feature:954339-954489:-1:exon
so has part: feature:953725-953780:-1:exon
so has part: feature:952716-952777:-1:exon
so has part: feature:951736-951873:-1:exon
so has part: feature:950729-950805:-1:exon
so has part: feature:950169-950184:-1:exon

XP_030320322.1
type: Protein
SIO_000068: ncbiprotein

position:964067:-1
position: 964067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:963926-964067:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:963394-963474:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:960793-960957:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:960302-960664:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:955633-956215:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:954860-955077:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:954339-954489:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:953725-953780:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:952716-952777:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:951736-951873:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:950729-950805:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:950169-950184:-1:exon

PHACTR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PHACTR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatase and actin regulator 4 isoform X6
translation: MGVDVLESGDTTPPTKRKSKFSGFGKIFKPWKWRKKKSSDKFKETSEVLERKISMRKPREELVKRGVLLEDPEQDGEDSDKLNPPALKNGHTVPIGGPGVGNLASQEEDATKPSSLRKPVPAEEPKNRQGSSSSHSGPELEPPQDLYVPRQPLLPPKRPPPTSQEGTEAPAKDPTPSCSTAKTAPSSTAPVVTKTVTNPTAAPSPAPRTLPPALASANTTAPTSTTSTAPAKQPPVPPPKPVNRNSTSVIAELSQAITSGTTLSKPSPPLPPKRGLLPNTTPDAALPSKPPSDRTVPAPRPALLPMHITSVYPPPSPSPPLPTHIPPEPPRMPLPLSTPVLDPPRSLDLPKETPPPPPEDFKSLEVSKRTAEQGFGDPPLLPRLPQLPLHIRIQQALASPLPVTPPPEGSHRAHSLLFENDGFGEDNNTLGRTRSLPVTIEMLKVPDDEEEDDQEEEQNPGPRVYIGDVPSVTIIPKLVPQVLPEEQEGDEGMSDSDSEGPILYKDEEDEEEDESHNSTLANKVKRKDTLAIKLGNTTIAQEEKVVFPRKSKEEWNEIRQQIGTTLIRRLSQRPTAEELEQRNILQPKNEADRQAEKREIKRRLTRKLSQRPTVAELQARKILRFNEYVEVTDAQDYDRRADKPWTKLTPADKAAIRKELNEFKSCEMEVHEDSKQFTRYHRP
SIO_010081: PHACTR4
subclass of: SO_0000673
so part of: PHACTR4
location: complement(join(950169..950184,950729..950805,951736..951873,952716..952777,953725..953780,954339..954489,954860..955077,955633..956215,960302..960664,960793..960957,963394..963474,963926..964067))
location: region:950169-964067:-1
so has part: feature:963926-964067:-1:exon
so has part: feature:963394-963474:-1:exon
so has part: feature:960793-960957:-1:exon
so has part: feature:960302-960664:-1:exon
so has part: feature:955633-956215:-1:exon
so has part: feature:954860-955077:-1:exon
so has part: feature:954339-954489:-1:exon
so has part: feature:953725-953780:-1:exon
so has part: feature:952716-952777:-1:exon
so has part: feature:951736-951873:-1:exon
so has part: feature:950729-950805:-1:exon
so has part: feature:950169-950184:-1:exon

XP_030320323.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:963926-964067:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:963394-963474:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:960793-960957:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:960302-960664:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:955633-956215:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:954860-955077:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:954339-954489:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:953725-953780:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:952716-952777:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:951736-951873:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:950729-950805:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:950169-950184:-1:exon

SESN2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SESN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1023196..1032286)
location: region:1023196-1032286:-1
so has part: feature:1023196-1032286:-1:exon
subclass of: SO_0000010

103535479
type: Gene
SIO_000068: ncbigene

position:1023196:-1
position: 1023196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1032286:-1
position: 1032286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1023196-1032286:-1:exon

SESN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SESN2
product: sestrin 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_030464336.1
SIO_010081: SESN2
subclass of: SO_0000673
so part of: SESN2
location: complement(join(1023196..1024337,1024419..1024563,1025304..1025494,1025703..1025818,1025961..1026111,1026555..1026746,1027022..1027204,1027944..1028141,1029053..1029118,1032030..1032286))
location: region:1023196-1032286:-1
so has part: feature:1032030-1032286:-1:exon
so has part: feature:1029053-1029118:-1:exon
so has part: feature:1027944-1028141:-1:exon
so has part: feature:1027022-1027204:-1:exon
so has part: feature:1026555-1026746:-1:exon
so has part: feature:1025961-1026111:-1:exon
so has part: feature:1025703-1025818:-1:exon
so has part: feature:1025304-1025494:-1:exon
so has part: feature:1024419-1024563:-1:exon
so has part: feature:1023196-1024337:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1032030-1032286:-1:exon

position:1032030:-1
position: 1032030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1029053-1029118:-1:exon

position:1029053:-1
position: 1029053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1029118:-1
position: 1029118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1027944-1028141:-1:exon

position:1027944:-1
position: 1027944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1028141:-1
position: 1028141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1027022-1027204:-1:exon

position:1027022:-1
position: 1027022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1027204:-1
position: 1027204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1026555-1026746:-1:exon

position:1026555:-1
position: 1026555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1026746:-1
position: 1026746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1025961-1026111:-1:exon

position:1025961:-1
position: 1025961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1026111:-1
position: 1026111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1025703-1025818:-1:exon

position:1025703:-1
position: 1025703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1025818:-1
position: 1025818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1025304-1025494:-1:exon

position:1025304:-1
position: 1025304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1025494:-1
position: 1025494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1024419-1024563:-1:exon

position:1024419:-1
position: 1024419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1024563:-1
position: 1024563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1023196-1024337:-1:exon

position:1024337:-1
position: 1024337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SESN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SESN2
product: sestrin 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030464335.1
SIO_010081: SESN2
subclass of: SO_0000673
so part of: SESN2
location: complement(join(1023196..1024337,1024419..1024563,1025304..1025494,1025703..1025818,1025961..1026111,1026555..1026746,1027022..1027204,1027944..1028078,1028296..1028533))
location: region:1023196-1028533:-1
so has part: feature:1028296-1028533:-1:exon
so has part: feature:1027944-1028078:-1:exon
so has part: feature:1027022-1027204:-1:exon
so has part: feature:1026555-1026746:-1:exon
so has part: feature:1025961-1026111:-1:exon
so has part: feature:1025703-1025818:-1:exon
so has part: feature:1025304-1025494:-1:exon
so has part: feature:1024419-1024563:-1:exon
so has part: feature:1023196-1024337:-1:exon

position:1028533:-1
position: 1028533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1028296-1028533:-1:exon

position:1028296:-1
position: 1028296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1027944-1028078:-1:exon

position:1028078:-1
position: 1028078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1027022-1027204:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1026555-1026746:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1025961-1026111:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1025703-1025818:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1025304-1025494:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1024419-1024563:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1023196-1024337:-1:exon

SESN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SESN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sestrin-2 isoform X2
translation: MLLAGSPCCPPGLEEYPAGQDRSVESPRQLGRGPSAFIPLEKILQEGVESTQGQLLIQALVSQGRVDNITMVMGLHPQYLSSFWKTQYLLLRMDGPLPYHKRHYIAIMAAARHRCSYLVGLHMGEFLQVGGNPEWLQGLHCAPQKLRNLNEINKLLAHRPWLITKEHIEALLKTGEDSWSLAELVQALVLLTHYHSLASFVFGCGINPEEEQEGGQSCRPPSPPSEDSMGGSGGKDAMQEVEVLMERLKLLQESQLEEEEVTQEEMATRFELEKTESLLVAPTDLGDHSLQSNVRCFVEDPEFGYKDFTRRGEQAPPTFRAQDYTWEDHGYSLINRLYPDVGQLLDEKFQVVYNLTYNTIAMHCGVDTSMLRRAIWNYVHCVFGIRYDDYDYGEVNQLLERSLKVYIKTVACYPEKTTKRMYTQFWRHFKHSEKVHVNLLLLEARMQAALLYALRAVTRYMT
SIO_010081: SESN2
subclass of: SO_0000673
so part of: SESN2
location: complement(join(1024251..1024337,1024419..1024563,1025304..1025494,1025703..1025818,1025961..1026111,1026555..1026746,1027022..1027204,1027944..1028141,1029053..1029118,1032030..1032089))
location: region:1024251-1032089:-1
so has part: feature:1032030-1032089:-1:exon
so has part: feature:1029053-1029118:-1:exon
so has part: feature:1027944-1028141:-1:exon
so has part: feature:1027022-1027204:-1:exon
so has part: feature:1026555-1026746:-1:exon
so has part: feature:1025961-1026111:-1:exon
so has part: feature:1025703-1025818:-1:exon
so has part: feature:1025304-1025494:-1:exon
so has part: feature:1024419-1024563:-1:exon
so has part: feature:1024251-1024337:-1:exon

XP_030320196.1
type: Protein
SIO_000068: ncbiprotein

position:1024251:-1
position: 1024251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1032089:-1
position: 1032089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1032030-1032089:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1029053-1029118:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1027944-1028141:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1027022-1027204:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1026555-1026746:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1025961-1026111:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1025703-1025818:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1025304-1025494:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1024419-1024563:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1024251-1024337:-1:exon

SESN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SESN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sestrin-2 isoform X1
translation: METPNPPRPPGSSRRCPFRAGRRLSTLDGGRVDNITMVMGLHPQYLSSFWKTQYLLLRMDGPLPYHKRHYIAIMAAARHRCSYLVGLHMGEFLQVGGNPEWLQGLHCAPQKLRNLNEINKLLAHRPWLITKEHIEALLKTGEDSWSLAELVQALVLLTHYHSLASFVFGCGINPEEEQEGGQSCRPPSPPSEDSMGGSGGKDAMQEVEVLMERLKLLQESQLEEEEVTQEEMATRFELEKTESLLVAPTDLGDHSLQSNVRCFVEDPEFGYKDFTRRGEQAPPTFRAQDYTWEDHGYSLINRLYPDVGQLLDEKFQVVYNLTYNTIAMHCGVDTSMLRRAIWNYVHCVFGIRYDDYDYGEVNQLLERSLKVYIKTVACYPEKTTKRMYTQFWRHFKHSEKVHVNLLLLEARMQAALLYALRAVTRYMT
SIO_010081: SESN2
subclass of: SO_0000673
so part of: SESN2
location: complement(join(1024251..1024337,1024419..1024563,1025304..1025494,1025703..1025818,1025961..1026111,1026555..1026746,1027022..1027204,1027944..1028078,1028296..1028382))
location: region:1024251-1028382:-1
so has part: feature:1028296-1028382:-1:exon
so has part: feature:1027944-1028078:-1:exon
so has part: feature:1027022-1027204:-1:exon
so has part: feature:1026555-1026746:-1:exon
so has part: feature:1025961-1026111:-1:exon
so has part: feature:1025703-1025818:-1:exon
so has part: feature:1025304-1025494:-1:exon
so has part: feature:1024419-1024563:-1:exon
so has part: feature:1024251-1024337:-1:exon

XP_030320195.1
type: Protein
SIO_000068: ncbiprotein

position:1028382:-1
position: 1028382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1028296-1028382:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1027944-1028078:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1027022-1027204:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1026555-1026746:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1025961-1026111:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1025703-1025818:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1025304-1025494:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1024419-1024563:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1024251-1024337:-1:exon

FAM76A
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: FAM76A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1039721..1056837)
location: region:1039721-1056837:-1
so has part: feature:1039721-1056837:-1:exon
subclass of: SO_0000010

103535515
type: Gene
SIO_000068: ncbigene

position:1039721:-1
position: 1039721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1056837:-1
position: 1056837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1039721-1056837:-1:exon

FAM76A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FAM76A
product: family with sequence similarity 76 member A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 2 long SRA reads, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030464520.1
SIO_010081: FAM76A
subclass of: SO_0000673
so part of: FAM76A
location: complement(join(1039721..1041710,1044070..1044171,1044891..1045026,1051026..1051112,1051657..1051814,1053069..1053221,1053727..1053781,1054554..1054618,1056714..1056837))
location: region:1039721-1056837:-1
so has part: feature:1056714-1056837:-1:exon
so has part: feature:1054554-1054618:-1:exon
so has part: feature:1053727-1053781:-1:exon
so has part: feature:1053069-1053221:-1:exon
so has part: feature:1051657-1051814:-1:exon
so has part: feature:1051026-1051112:-1:exon
so has part: feature:1044891-1045026:-1:exon
so has part: feature:1044070-1044171:-1:exon
so has part: feature:1039721-1041710:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1056714-1056837:-1:exon

position:1056714:-1
position: 1056714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1054554-1054618:-1:exon

position:1054554:-1
position: 1054554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1054618:-1
position: 1054618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1053727-1053781:-1:exon

position:1053727:-1
position: 1053727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1053781:-1
position: 1053781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1053069-1053221:-1:exon

position:1053069:-1
position: 1053069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1053221:-1
position: 1053221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1051657-1051814:-1:exon

position:1051657:-1
position: 1051657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1051814:-1
position: 1051814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1051026-1051112:-1:exon

position:1051026:-1
position: 1051026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1051112:-1
position: 1051112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1044891-1045026:-1:exon

position:1044891:-1
position: 1044891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1045026:-1
position: 1045026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1044070-1044171:-1:exon

position:1044070:-1
position: 1044070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1044171:-1
position: 1044171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1039721-1041710:-1:exon

position:1041710:-1
position: 1041710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FAM76A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FAM76A
product: family with sequence similarity 76 member A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464518.1
SIO_010081: FAM76A
subclass of: SO_0000673
so part of: FAM76A
location: complement(join(1040127..1041710,1044070..1044171,1044891..1045026,1050249..1050380,1051026..1051112,1051657..1051814,1053069..1053221,1053727..1053781,1054554..1054618,1056714..1056837))
location: region:1040127-1056837:-1
so has part: feature:1056714-1056837:-1:exon
so has part: feature:1054554-1054618:-1:exon
so has part: feature:1053727-1053781:-1:exon
so has part: feature:1053069-1053221:-1:exon
so has part: feature:1051657-1051814:-1:exon
so has part: feature:1051026-1051112:-1:exon
so has part: feature:1050249-1050380:-1:exon
so has part: feature:1044891-1045026:-1:exon
so has part: feature:1044070-1044171:-1:exon
so has part: feature:1040127-1041710:-1:exon

position:1040127:-1
position: 1040127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1056714-1056837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1054554-1054618:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1053727-1053781:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1053069-1053221:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1051657-1051814:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1051026-1051112:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1050249-1050380:-1:exon

position:1050249:-1
position: 1050249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1050380:-1
position: 1050380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1044891-1045026:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1044070-1044171:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1040127-1041710:-1:exon

FAM76A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FAM76A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM76A isoform X2
translation: MAALYACTKCHQRFPFEALSQGQQLCKECRIAHPIVKCTYCRTEFQQESKTNTICKKCAQNVKLYGTPKPCQYCNIIAAFIGNKCQRCTNSEKKYGPPHSCEQCKQQCAFDRKDDRKKVDGKLLCWLCTLSYKRVLQKTKEQCKHLSSSSRASLQEKEQYSRLSSGSHYNSQKTLSTSSIQNEIPKKKAKFDAISANGDSFSPDLALDSPGTDHFVIIAQLKEEVATLKKMLHQKDQMILEKEKKITELKADLQYQESQMRAKMNQMEKTHKEVMEQLQAKNRELLKQAAALSKGKKPEKSGAITSP
SIO_010081: FAM76A
subclass of: SO_0000673
so part of: FAM76A
location: complement(join(1041624..1041710,1044070..1044171,1044891..1045026,1051026..1051112,1051657..1051814,1053069..1053221,1053727..1053781,1054554..1054618,1056714..1056794))
location: region:1041624-1056794:-1
so has part: feature:1056714-1056794:-1:exon
so has part: feature:1054554-1054618:-1:exon
so has part: feature:1053727-1053781:-1:exon
so has part: feature:1053069-1053221:-1:exon
so has part: feature:1051657-1051814:-1:exon
so has part: feature:1051026-1051112:-1:exon
so has part: feature:1044891-1045026:-1:exon
so has part: feature:1044070-1044171:-1:exon
so has part: feature:1041624-1041710:-1:exon

XP_030320380.1
type: Protein
SIO_000068: ncbiprotein

position:1041624:-1
position: 1041624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1056794:-1
position: 1056794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1056714-1056794:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1054554-1054618:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1053727-1053781:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1053069-1053221:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1051657-1051814:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1051026-1051112:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1044891-1045026:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1044070-1044171:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1041624-1041710:-1:exon

FAM76A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FAM76A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM76A isoform X1
translation: MAALYACTKCHQRFPFEALSQGQQLCKECRIAHPIVKCTYCRTEFQQESKTNTICKKCAQNVKLYGTPKPCQYCNIIAAFIGNKCQRCTNSEKKYGPPHSCEQCKQQCAFDRKDDRKKVDGKLLCWLCTLSYKRVLQKTKEQCKHLSSSSRASLQEKEQYSRLSSGSHYNSQKTLSTSSIQNEIPKKKAKFDAISANGDSVPSSPEMLCPPTQSVPAPLVQWAASQQSLGAHHCPVAQGTDILNFSPDLALDSPGTDHFVIIAQLKEEVATLKKMLHQKDQMILEKEKKITELKADLQYQESQMRAKMNQMEKTHKEVMEQLQAKNRELLKQAAALSKGKKPEKSGAITSP
SIO_010081: FAM76A
subclass of: SO_0000673
so part of: FAM76A
location: complement(join(1041624..1041710,1044070..1044171,1044891..1045026,1050249..1050380,1051026..1051112,1051657..1051814,1053069..1053221,1053727..1053781,1054554..1054618,1056714..1056794))
location: region:1041624-1056794:-1
so has part: feature:1056714-1056794:-1:exon
so has part: feature:1054554-1054618:-1:exon
so has part: feature:1053727-1053781:-1:exon
so has part: feature:1053069-1053221:-1:exon
so has part: feature:1051657-1051814:-1:exon
so has part: feature:1051026-1051112:-1:exon
so has part: feature:1050249-1050380:-1:exon
so has part: feature:1044891-1045026:-1:exon
so has part: feature:1044070-1044171:-1:exon
so has part: feature:1041624-1041710:-1:exon

XP_030320378.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1056714-1056794:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1054554-1054618:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1053727-1053781:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1053069-1053221:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1051657-1051814:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1051026-1051112:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1050249-1050380:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1044891-1045026:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1044070-1044171:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1041624-1041710:-1:exon

LOC103535480
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103535480
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1065079..1071649)
location: region:1065079-1071649:-1
so has part: feature:1065079-1071649:-1:exon
subclass of: SO_0000010

103535480
type: Gene
SIO_000068: ncbigene

position:1065079:-1
position: 1065079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1071649:-1
position: 1071649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1065079-1071649:-1:exon

LOC103535480
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103535480
product: digestive cysteine proteinase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_008501537.2
SIO_010081: LOC103535480
subclass of: SO_0000673
so part of: LOC103535480
location: complement(join(1065079..1065535,1065958..1066147,1066722..1066883,1066961..1067052,1067796..1067989,1068074..1068269,1068805..1069048,1070012..1070184,1070290..1070382,1070578..1070637,1071522..1071649))
location: region:1065079-1071649:-1
so has part: feature:1071522-1071649:-1:exon
so has part: feature:1070578-1070637:-1:exon
so has part: feature:1070290-1070382:-1:exon
so has part: feature:1070012-1070184:-1:exon
so has part: feature:1068805-1069048:-1:exon
so has part: feature:1068074-1068269:-1:exon
so has part: feature:1067796-1067989:-1:exon
so has part: feature:1066961-1067052:-1:exon
so has part: feature:1066722-1066883:-1:exon
so has part: feature:1065958-1066147:-1:exon
so has part: feature:1065079-1065535:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1071522-1071649:-1:exon

position:1071522:-1
position: 1071522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1070578-1070637:-1:exon

position:1070578:-1
position: 1070578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1070637:-1
position: 1070637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1070290-1070382:-1:exon

position:1070290:-1
position: 1070290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1070382:-1
position: 1070382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1070012-1070184:-1:exon

position:1070012:-1
position: 1070012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1070184:-1
position: 1070184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1068805-1069048:-1:exon

position:1068805:-1
position: 1068805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1069048:-1
position: 1069048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1068074-1068269:-1:exon

position:1068074:-1
position: 1068074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1068269:-1
position: 1068269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1067796-1067989:-1:exon

position:1067796:-1
position: 1067796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067989:-1
position: 1067989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1066961-1067052:-1:exon

position:1066961:-1
position: 1066961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067052:-1
position: 1067052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1066722-1066883:-1:exon

position:1066722:-1
position: 1066722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1066883:-1
position: 1066883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1065958-1066147:-1:exon

position:1065958:-1
position: 1065958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1066147:-1
position: 1066147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1065079-1065535:-1:exon

position:1065535:-1
position: 1065535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103535480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103535480
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: digestive cysteine proteinase 1
translation: MGALCWLVASALCIAIRGQDQGFSRPHPQFGSIYHVQGVINLPYAEIEEPFEAWYNQTGNKSRIQYYDGQVITYQLAGVKPYGMLYKITPETTEKEVNTRKCFQLPGSKEDVVKAQSVFPSMDGFKFLREEYFQGRYCAVWQNITHWAQKKNVYTMWVTNSSCGVAPVHYEMRGYNTLLGSHYDKYEISYTDFDNSFPPSIFDPPINETKKCGVLPGSVAEHRVLANPMEDLVGRHQPRAHRVFHQYHRRLGRNYSSVRELEHRQSIFIHNMRFVHSKNRAALSYTLALNHLADRTAQELSALRGHRPSGTPNHGQPFPTHLYTGLILPESLDWRMYGAVTPVKDQAVCGSCWSFATTGAMEGALFLKTGVLTPLSQQVLIDCSWGFGNYACDGGEEWRAYEWIKKHGGISSTESYGTYKGQNGLCHYNQSEMLAKITGYVNVTSGNITAVKAAIYKHGPVAVSIDASHKTFSFYSNGVYYEPKCGNVSGTLDHAVLAVGYGVLQGETYWLIKNSWSTYWGNDGYILMAMKDNNCGVATEATYPILA
SIO_010081: LOC103535480
subclass of: SO_0000673
so part of: LOC103535480
location: complement(join(1065348..1065535,1065958..1066147,1066722..1066883,1066961..1067052,1067796..1067989,1068074..1068269,1068805..1069048,1070012..1070184,1070290..1070382,1070578..1070637,1071522..1071573))
location: region:1065348-1071573:-1
so has part: feature:1071522-1071573:-1:exon
so has part: feature:1070578-1070637:-1:exon
so has part: feature:1070290-1070382:-1:exon
so has part: feature:1070012-1070184:-1:exon
so has part: feature:1068805-1069048:-1:exon
so has part: feature:1068074-1068269:-1:exon
so has part: feature:1067796-1067989:-1:exon
so has part: feature:1066961-1067052:-1:exon
so has part: feature:1066722-1066883:-1:exon
so has part: feature:1065958-1066147:-1:exon
so has part: feature:1065348-1065535:-1:exon

XP_008499759.1
type: Protein
SIO_000068: ncbiprotein

position:1065348:-1
position: 1065348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1071573:-1
position: 1071573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1071522-1071573:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1070578-1070637:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1070290-1070382:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1070012-1070184:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1068805-1069048:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1068074-1068269:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1067796-1067989:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1066961-1067052:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1066722-1066883:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1065958-1066147:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1065348-1065535:-1:exon

FGR
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: FGR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1073718..1085552
location: region:1073718-1085552:1
so has part: feature:1073718-1085552:1:exon
subclass of: SO_0000010

103535481
type: Gene
SIO_000068: ncbigene

position:1073718:1
position: 1073718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1085552:1
position: 1085552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1073718-1085552:1:exon

FGR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FGR
product: FGR proto-oncogene, Src family tyrosine kinase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030464472.1
SIO_010081: FGR
subclass of: SO_0000673
so part of: FGR
location: join(1073718..1073868,1077830..1077890,1078077..1078329,1078435..1078537,1078777..1078875,1079059..1079162,1079252..1079401,1080167..1080331,1081360..1081539,1082357..1082433,1082516..1082669,1084237..1084368,1084703..1085552)
location: region:1073718-1085552:1
so has part: feature:1073718-1073868:1:exon
so has part: feature:1077830-1077890:1:exon
so has part: feature:1078077-1078329:1:exon
so has part: feature:1078435-1078537:1:exon
so has part: feature:1078777-1078875:1:exon
so has part: feature:1079059-1079162:1:exon
so has part: feature:1079252-1079401:1:exon
so has part: feature:1080167-1080331:1:exon
so has part: feature:1081360-1081539:1:exon
so has part: feature:1082357-1082433:1:exon
so has part: feature:1082516-1082669:1:exon
so has part: feature:1084237-1084368:1:exon
so has part: feature:1084703-1085552:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1073718-1073868:1:exon

position:1073868:1
position: 1073868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1077830-1077890:1:exon

position:1077830:1
position: 1077830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1077890:1
position: 1077890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1078077-1078329:1:exon

position:1078077:1
position: 1078077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1078329:1
position: 1078329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1078435-1078537:1:exon

position:1078435:1
position: 1078435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1078537:1
position: 1078537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1078777-1078875:1:exon

position:1078777:1
position: 1078777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1078875:1
position: 1078875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1079059-1079162:1:exon

position:1079059:1
position: 1079059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1079162:1
position: 1079162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1079252-1079401:1:exon

position:1079252:1
position: 1079252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1079401:1
position: 1079401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1080167-1080331:1:exon

position:1080167:1
position: 1080167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1080331:1
position: 1080331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1081360-1081539:1:exon

position:1081360:1
position: 1081360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1081539:1
position: 1081539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1082357-1082433:1:exon

position:1082357:1
position: 1082357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1082433:1
position: 1082433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1082516-1082669:1:exon

position:1082516:1
position: 1082516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1082669:1
position: 1082669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1084237-1084368:1:exon

position:1084237:1
position: 1084237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1084368:1
position: 1084368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1084703-1085552:1:exon

position:1084703:1
position: 1084703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FGR
product: FGR proto-oncogene, Src family tyrosine kinase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464473.1
SIO_010081: FGR
subclass of: SO_0000673
so part of: FGR
location: join(1073718..1073868,1077830..1077890,1078077..1078329,1078435..1078537,1078777..1078875,1079059..1079162,1079252..1079401,1080744..1080899,1081360..1081539,1082357..1082433,1082516..1082669,1084237..1084368,1084703..1085552)
location: region:1073718-1085552:1
so has part: feature:1073718-1073868:1:exon
so has part: feature:1077830-1077890:1:exon
so has part: feature:1078077-1078329:1:exon
so has part: feature:1078435-1078537:1:exon
so has part: feature:1078777-1078875:1:exon
so has part: feature:1079059-1079162:1:exon
so has part: feature:1079252-1079401:1:exon
so has part: feature:1080744-1080899:1:exon
so has part: feature:1081360-1081539:1:exon
so has part: feature:1082357-1082433:1:exon
so has part: feature:1082516-1082669:1:exon
so has part: feature:1084237-1084368:1:exon
so has part: feature:1084703-1085552:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1073718-1073868:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1077830-1077890:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1078077-1078329:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1078435-1078537:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1078777-1078875:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1079059-1079162:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1079252-1079401:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1080744-1080899:1:exon

position:1080744:1
position: 1080744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1080899:1
position: 1080899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1081360-1081539:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1082357-1082433:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1082516-1082669:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1084237-1084368:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1084703-1085552:1:exon

FGR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FGR
product: FGR proto-oncogene, Src family tyrosine kinase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464474.1
SIO_010081: FGR
subclass of: SO_0000673
so part of: FGR
location: join(1073718..1073868,1077830..1077890,1078077..1078329,1078435..1078537,1078777..1078875,1079059..1079162,1079252..1079401,1081360..1081539,1082357..1082433,1082516..1082669,1084237..1084368,1084703..1085552)
location: region:1073718-1085552:1
so has part: feature:1073718-1073868:1:exon
so has part: feature:1077830-1077890:1:exon
so has part: feature:1078077-1078329:1:exon
so has part: feature:1078435-1078537:1:exon
so has part: feature:1078777-1078875:1:exon
so has part: feature:1079059-1079162:1:exon
so has part: feature:1079252-1079401:1:exon
so has part: feature:1081360-1081539:1:exon
so has part: feature:1082357-1082433:1:exon
so has part: feature:1082516-1082669:1:exon
so has part: feature:1084237-1084368:1:exon
so has part: feature:1084703-1085552:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1073718-1073868:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1077830-1077890:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1078077-1078329:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1078435-1078537:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1078777-1078875:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1079059-1079162:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1079252-1079401:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1081360-1081539:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1082357-1082433:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1082516-1082669:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1084237-1084368:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1084703-1085552:1:exon

FGR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FGR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase Fgr isoform X1
translation: MGCVPCKEKESGKGQVGGEGGASPPPASQYDPDPTQPGSAFTRIPDFNNFHGTGVPSAPTFGGLGGFTPNTLRKRSGGITGGGVTLFIALYDYEARTEDDLTFQKGEKFHIINNTEGDWWEARSLSSGATGYIPSNYVAPVDSIQAEEWYFGKIGRKDAERQLLCHGNCRGTFLIRESETTKGAYSLSIRDWDEAKGDHVKHYKIRKLDIGGYYITTRAQFDTVQQLVQHYIERAAGLCCRLAVPCPKGTPKLADLSVKTKDVWEIPRESLQLLKKLGNGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLEEAQIMKRLRHDKLVQLYAVVSEEPIYIVTEFMSQGSLLDFLKDGDGRYLKLPQLVDMAAQIAAGMAYIERMNYIHRDLRAANILVGENLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALFGKFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMQCPGSCPPSLHEVMVQCWKREPEERPTFEYLQSFLEDYFTATEPQYQPGDNQ
SIO_010081: FGR
subclass of: SO_0000673
so part of: FGR
location: join(1078089..1078329,1078435..1078537,1078777..1078875,1079059..1079162,1079252..1079401,1080167..1080331,1081360..1081539,1082357..1082433,1082516..1082669,1084237..1084368,1084703..1084911)
location: region:1078089-1084911:1
so has part: feature:1078089-1078329:1:exon
so has part: feature:1078435-1078537:1:exon
so has part: feature:1078777-1078875:1:exon
so has part: feature:1079059-1079162:1:exon
so has part: feature:1079252-1079401:1:exon
so has part: feature:1080167-1080331:1:exon
so has part: feature:1081360-1081539:1:exon
so has part: feature:1082357-1082433:1:exon
so has part: feature:1082516-1082669:1:exon
so has part: feature:1084237-1084368:1:exon
so has part: feature:1084703-1084911:1:exon

XP_030320332.1
type: Protein
SIO_000068: ncbiprotein

position:1078089:1
position: 1078089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1084911:1
position: 1084911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1078089-1078329:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1078435-1078537:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1078777-1078875:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1079059-1079162:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1079252-1079401:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1080167-1080331:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1081360-1081539:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1082357-1082433:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1082516-1082669:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1084237-1084368:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1084703-1084911:1:exon

FGR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FGR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase Fgr isoform X2
translation: MGCVPCKEKESGKGQVGGEGGASPPPASQYDPDPTQPGSAFTRIPDFNNFHGTGVPSAPTFGGLGGFTPNTLRKRSGGITGGGVTLFIALYDYEARTEDDLTFQKGEKFHIINNTEGDWWEARSLSSGATGYIPSNYVAPVDSIQAEEWYFGKIGRKDAERQLLCHGNCRGTFLIRESETTKGAYSLSIRDWDEAKGDHVKHYKIRKLDIGGYYITTRAQFDTVQQLVQHYIEYNDGLCHLLTHPCPTMKPQTLGLAKDAWEIARESISLNQKVGMGFFGDVWMGTWNGTTKVAVKTLKPGTMSPEAFLEEAQIMKRLRHDKLVQLYAVVSEEPIYIVTEFMSQGSLLDFLKDGDGRYLKLPQLVDMAAQIAAGMAYIERMNYIHRDLRAANILVGENLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALFGKFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMQCPGSCPPSLHEVMVQCWKREPEERPTFEYLQSFLEDYFTATEPQYQPGDNQ
SIO_010081: FGR
subclass of: SO_0000673
so part of: FGR
location: join(1078089..1078329,1078435..1078537,1078777..1078875,1079059..1079162,1079252..1079401,1080744..1080899,1081360..1081539,1082357..1082433,1082516..1082669,1084237..1084368,1084703..1084911)
location: region:1078089-1084911:1
so has part: feature:1078089-1078329:1:exon
so has part: feature:1078435-1078537:1:exon
so has part: feature:1078777-1078875:1:exon
so has part: feature:1079059-1079162:1:exon
so has part: feature:1079252-1079401:1:exon
so has part: feature:1080744-1080899:1:exon
so has part: feature:1081360-1081539:1:exon
so has part: feature:1082357-1082433:1:exon
so has part: feature:1082516-1082669:1:exon
so has part: feature:1084237-1084368:1:exon
so has part: feature:1084703-1084911:1:exon

XP_030320333.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1078089-1078329:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1078435-1078537:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1078777-1078875:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1079059-1079162:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1079252-1079401:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1080744-1080899:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1081360-1081539:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1082357-1082433:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1082516-1082669:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1084237-1084368:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1084703-1084911:1:exon

FGR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FGR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase Fgr isoform X3
translation: MGCVPCKEKESGKGQVGGEGGASPPPASQYDPDPTQPGSAFTRIPDFNNFHGTGVPSAPTFGGLGGFTPNTLRKRSGGITGGGVTLFIALYDYEARTEDDLTFQKGEKFHIINNTEGDWWEARSLSSGATGYIPSNYVAPVDSIQAEEWYFGKIGRKDAERQLLCHGNCRGTFLIRESETTKGAYSLSIRDWDEAKGDHVKHYKIRKLDIGGYYITTRAQFDTVQQLVQHYIGTWNGTTKVAVKTLKPGTMSPEAFLEEAQIMKRLRHDKLVQLYAVVSEEPIYIVTEFMSQGSLLDFLKDGDGRYLKLPQLVDMAAQIAAGMAYIERMNYIHRDLRAANILVGENLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALFGKFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMQCPGSCPPSLHEVMVQCWKREPEERPTFEYLQSFLEDYFTATEPQYQPGDNQ
SIO_010081: FGR
subclass of: SO_0000673
so part of: FGR
location: join(1078089..1078329,1078435..1078537,1078777..1078875,1079059..1079162,1079252..1079401,1081360..1081539,1082357..1082433,1082516..1082669,1084237..1084368,1084703..1084911)
location: region:1078089-1084911:1
so has part: feature:1078089-1078329:1:exon
so has part: feature:1078435-1078537:1:exon
so has part: feature:1078777-1078875:1:exon
so has part: feature:1079059-1079162:1:exon
so has part: feature:1079252-1079401:1:exon
so has part: feature:1081360-1081539:1:exon
so has part: feature:1082357-1082433:1:exon
so has part: feature:1082516-1082669:1:exon
so has part: feature:1084237-1084368:1:exon
so has part: feature:1084703-1084911:1:exon

XP_030320334.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1078089-1078329:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1078435-1078537:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1078777-1078875:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1079059-1079162:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1079252-1079401:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1081360-1081539:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1082357-1082433:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1082516-1082669:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1084237-1084368:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1084703-1084911:1:exon

AHDC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: AHDC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1093130..1142824
location: region:1093130-1142824:1
so has part: feature:1093130-1142824:1:exon
subclass of: SO_0000010

103535516
type: Gene
SIO_000068: ncbigene

position:1093130:1
position: 1093130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1142824:1
position: 1142824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1093130-1142824:1:exon

AHDC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: AHDC1
product: AT-hook DNA binding motif containing 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030464517.1
SIO_010081: AHDC1
subclass of: SO_0000673
so part of: AHDC1
location: join(1093130..1093271,1136282..1136447,1137169..1137209,1137519..1142607,1142733..1142824)
location: region:1093130-1142824:1
so has part: feature:1093130-1093271:1:exon
so has part: feature:1136282-1136447:1:exon
so has part: feature:1137169-1137209:1:exon
so has part: feature:1137519-1142607:1:exon
so has part: feature:1142733-1142824:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1093130-1093271:1:exon

position:1093271:1
position: 1093271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1136282-1136447:1:exon

position:1136282:1
position: 1136282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1136447:1
position: 1136447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1137169-1137209:1:exon

position:1137169:1
position: 1137169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1137209:1
position: 1137209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1137519-1142607:1:exon

position:1137519:1
position: 1137519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1142607:1
position: 1142607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1142733-1142824:1:exon

position:1142733:1
position: 1142733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AHDC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: AHDC1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: AT-hook DNA-binding motif-containing protein 1
translation: MLSLKVASGAEGSGTPAAGPEVAPADSRSLPKRAGSGGLGTQQPVDGSSVACQPLALENGASPPAAEQCPHSQGPGPRQPGSDGDSSTFPVNLHCKHPRPRELKCNSRSSSKAEGPGPTFPDPHVSNCSAKRHAGEEEVRMRVKPPGPVVTTSVVRGSPDYVREPKFYPPGHPAQRPPACPAEKALSCSVLSFPEGSCPALGREHQAGSLLHGDPADRCQSVHGGTKAAEELLGCAGEPRILGGSAEEAAARDRAPKTFPDATLASGRCNVDGILALLRSKCGNGHINLHPVVQLIDIMKDLNRLSEDLKSSGVHLDCGSLRGGGRGGGGGGGGHEDNRLLPADRDLQYSFFSSPSLANSIRSPEERGVHCKTEPPRHPRPPARDGEAEGGGGSTPQPPGHSGGVSKAPAEEAGCSQPDAGDYSDLAEADILNELASLACPGTQLLESQAMEPQPQLLPAQELDSQSRLLDSQSLESQPQLLDSQSLEPLPESLELQNLEPLGLQSLEPLSESLELQSLEPLSESLELQSLEPLAEPLGLQTLEPLPGALEPPLLDARAPLLPTEPSLLEPQPLGPVSELLEAQPGAGDPMRPHGLQPRLGGCPLSSVVKRGPCGGRGAGRCGEDHRKYALRRTDKPKMLCRRRRAGRGRRADIPSESRVLSPLALPAEVPPGPEEPSTPLLTPPLPPPTAMDPDEVPKAPPPGKKSKCRGVRKMVVKMAKIPVSLGRRNKTTYKVSSLSSNLNLEGKELATSSSMEPTPLLKMKNNGRNVVVVFPPGEMPIILKRKRGRPPKNLLLGQAKPKEPVPEVKKRRRRKQKLASPQPSYIADTNDSKADYSDVLAKLAFLNRQSQCSGRCSPPRCWTPSEPESIHQAPDTQSISHFLHRVQGFRRRGGKAGGFGGRGGGHAARAARCSFSDFFEGIGKKKKAPAAALHADAVHPRKRGRPEPDPVGKPKRKRRARKNGALFPEPNPGQSFGDGPTEWAGGEKGSPWAPHHGHPGGQAGRNGGYQGAEARPFHAAGLESGSSGRAGFYGGSAASSQAEAGPERHSLFTGYFRSLLDSDDSSDLLDFALSASRSESRKSAAAYTAPPAALPGQRGMATYPARGGKVAAATPGAEAAFHAAMQGRTAFPPGRTAATGYSVSQGSSECRGAEAFPKLAPPSAVSRSPTAHLATSGTTGFSPYGNYGTGQSVAPASVFPPGKQYPSAQDCPNSKDCSFAYGSGSSLPSSPSSAHSAGYAPPTAGPSLPLGKAAFFNSAEQGGQFSSAAHTPLRCDSRASTVSPGGYMVPKGSASFQPSPENCRQFPSATPWAFRQGYGGLDWSSEAFSQLYNPGFECHLNEPNVILDISNYTPQKAKQQTVSETFSESSSDSTQFNQPAGYRRANSEASSSEGQSSLSSLEKLMMDWNEASSAPGYNWNQSVLFQSNSKPGRGRRKKVDMFDTSHLNFSSSSSSSSVYPSKRSTGPRQPRGSRGACASKKERGTGKAKFPTKSQAVNPLFQESTDLGLDYYSGDSSMSPLPSQSRGFGMGERDPCDYAGPYSMNPSTPSDGTFVQGFQSDSPGLGQPDLESKHFPALPHQLAAPGQQTVFEAGLQKAFSPNCSPTLAFKEDLRAGDIRKLPACDSLKHSMQGGALPHAPHLPCRDLPMPQPHYDSPSCKNPPYWYSPNASTRSPSYDGKGGAGMLVDFMGRTDPPCLNPHLSSPSSTHPSKGEKEPLEMSRAHHRGPYACPLINDLNISPVPRDSMLQLQDNYRYPSFAPQGHPVMAPTQKSGFLGPMVEQQHPEDTFTVTSL
SIO_010081: AHDC1
subclass of: SO_0000673
so part of: AHDC1
location: join(1093136..1093271,1136282..1136447,1137169..1137209,1137519..1142564)
location: region:1093136-1142564:1
so has part: feature:1093136-1093271:1:exon
so has part: feature:1136282-1136447:1:exon
so has part: feature:1137169-1137209:1:exon
so has part: feature:1137519-1142564:1:exon

XP_030320377.1
type: Protein
SIO_000068: ncbiprotein

position:1093136:1
position: 1093136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1142564:1
position: 1142564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1093136-1093271:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1136282-1136447:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1137169-1137209:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1137519-1142564:1:exon

WASF2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: WASF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1156955..1189649
location: region:1156955-1189649:1
so has part: feature:1156955-1189649:1:exon
subclass of: SO_0000010

103535517
type: Gene
SIO_000068: ncbigene

position:1156955:1
position: 1156955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1189649:1
position: 1189649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1156955-1189649:1:exon

WASF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: WASF2
product: WASP family member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 2 long SRA reads, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030464252.1
SIO_010081: WASF2
subclass of: SO_0000673
so part of: WASF2
location: join(1156955..1157061,1173716..1173869,1177752..1177886,1178400..1178553,1179683..1179800,1180923..1181053,1182599..1182754,1184454..1184974,1185462..1189649)
location: region:1156955-1189649:1
so has part: feature:1156955-1157061:1:exon
so has part: feature:1173716-1173869:1:exon
so has part: feature:1177752-1177886:1:exon
so has part: feature:1178400-1178553:1:exon
so has part: feature:1179683-1179800:1:exon
so has part: feature:1180923-1181053:1:exon
so has part: feature:1182599-1182754:1:exon
so has part: feature:1184454-1184974:1:exon
so has part: feature:1185462-1189649:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1156955-1157061:1:exon

position:1157061:1
position: 1157061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1173716-1173869:1:exon

position:1173716:1
position: 1173716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1173869:1
position: 1173869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1177752-1177886:1:exon

position:1177752:1
position: 1177752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1177886:1
position: 1177886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1178400-1178553:1:exon

position:1178400:1
position: 1178400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1178553:1
position: 1178553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1179683-1179800:1:exon

position:1179683:1
position: 1179683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1179800:1
position: 1179800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1180923-1181053:1:exon

position:1180923:1
position: 1180923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1181053:1
position: 1181053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1182599-1182754:1:exon

position:1182599:1
position: 1182599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1182754:1
position: 1182754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1184454-1184974:1:exon

position:1184454:1
position: 1184454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1184974:1
position: 1184974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1185462-1189649:1:exon

position:1185462:1
position: 1185462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WASF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: WASF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: wiskott-Aldrich syndrome protein family member 2
translation: MPLVTRNIEPRHLCRQTLPSVPSELECMTNITLANVIRQLGSLSKFAEDIFGELFTQAKTFASRVSVLVERVDRLQVKVTQLDPKEEEVSLQGINTRKAFKSSTTQDQKLFDRDSLPVPVLETYKTCNTPPPLNILSPYRDDGKEALKFYTDPSYFFDLWKEKMLQDTKDIMKEKRKHRKEKKENPNRGNVNPRKIKTRKEEWEKLKMGQEFVESKDKHGPGGYPSNMVYQNGSIGSNESMDGNCYPPPPQTDSIVPPPPSFPDDSLPPPPVEFSYPVDNQRGSGSGGTKRSSLVSPSHPPPAPPIGSPSAARPGFAPPPAPPPPLPLIGNPSPPPPPMGFPSPGTPPPPSPPSFPPHPEFAAPPPPPPPPAVDYASVLPPPLPQLTGGSAPPPPPPPPPPGPPPLSSGGLDGPPPPPPPSDTSTSKPKSSLPAVSDARSDLLSAIRQGFQLRKVEEQREQEKRDVVGNDVATILSRRIAVEYSDSEDDSSEFDEDEWSD
SIO_010081: WASF2
subclass of: SO_0000673
so part of: WASF2
location: join(1173740..1173869,1177752..1177886,1178400..1178553,1179683..1179800,1180923..1181053,1182599..1182754,1184454..1184974,1185462..1185619)
location: region:1173740-1185619:1
so has part: feature:1173740-1173869:1:exon
so has part: feature:1177752-1177886:1:exon
so has part: feature:1178400-1178553:1:exon
so has part: feature:1179683-1179800:1:exon
so has part: feature:1180923-1181053:1:exon
so has part: feature:1182599-1182754:1:exon
so has part: feature:1184454-1184974:1:exon
so has part: feature:1185462-1185619:1:exon

XP_030320112.1
type: Protein
SIO_000068: ncbiprotein

position:1173740:1
position: 1173740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1185619:1
position: 1185619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1173740-1173869:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1177752-1177886:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1178400-1178553:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1179683-1179800:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1180923-1181053:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1182599-1182754:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1184454-1184974:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1185462-1185619:1:exon

GPR3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: GPR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1196472..1198381)
location: region:1196472-1198381:-1
so has part: feature:1196472-1198381:-1:exon
subclass of: SO_0000010

103535483
type: Gene
SIO_000068: ncbigene

position:1196472:-1
position: 1196472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1198381:-1
position: 1198381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1196472-1198381:-1:exon

GPR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: GPR3
product: G protein-coupled receptor 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030464505.1
SIO_010081: GPR3
subclass of: SO_0000673
so part of: GPR3
location: complement(join(1196472..1197465,1198305..1198381))
location: region:1196472-1198381:-1
so has part: feature:1198305-1198381:-1:exon
so has part: feature:1196472-1197465:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1198305-1198381:-1:exon

position:1198305:-1
position: 1198305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1196472-1197465:-1:exon

position:1197465:-1
position: 1197465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: GPR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 3
translation: MIEDGPPSSSHGRFAAQNGTSSSLDLESVVQPLALNPWDVVLCISGTIISCENAIVVVVIFYTPAFRAPTFLLIGSLATADLLAGLGLILHFAFVYLVPSEAVSLLTVGLLVTSFTASISSLLTITIDRYLSLYNALTYYSERTVTRTYIMLILTWGGSICLGLLPIMGWNCLEEPSSCSIVKPLMKNHLIILSISFFMVFGVMLQLYVQICKIVCRHAHQIAVQRHFLATSHYVTTRKGIATLALILGTFASCWLPFTIYCLLGDYTYPALYTYLTLLPATYNSMINPIIYAFRNQEIQKVLWAICCCCFSSAVPFRSRSPSDV
SIO_010081: GPR3
subclass of: SO_0000673
so part of: GPR3
location: complement(1196472..1197449)
location: region:1196472-1197449:-1
so has part: feature:1196472-1197449:-1:exon

XP_030320365.1
type: Protein
SIO_000068: ncbiprotein

position:1197449:-1
position: 1197449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1196472-1197449:-1:exon

CD164L2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: CD164L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1199638..1204896
location: region:1199638-1204896:1
so has part: feature:1199638-1204896:1:exon
subclass of: SO_0000010

103535518
type: Gene
SIO_000068: ncbigene

position:1199638:1
position: 1199638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1204896:1
position: 1204896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1199638-1204896:1:exon

CD164L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CD164L2
product: CD164 molecule like 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030464506.1
SIO_010081: CD164L2
subclass of: SO_0000673
so part of: CD164L2
location: join(1199638..1199822,1201404..1201508,1201755..1201832,1202025..1202090,1202727..1202889,1204408..1204896)
location: region:1199638-1204896:1
so has part: feature:1199638-1199822:1:exon
so has part: feature:1201404-1201508:1:exon
so has part: feature:1201755-1201832:1:exon
so has part: feature:1202025-1202090:1:exon
so has part: feature:1202727-1202889:1:exon
so has part: feature:1204408-1204896:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1199638-1199822:1:exon

position:1199822:1
position: 1199822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1201404-1201508:1:exon

position:1201404:1
position: 1201404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1201508:1
position: 1201508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1201755-1201832:1:exon

position:1201755:1
position: 1201755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1201832:1
position: 1201832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1202025-1202090:1:exon

position:1202025:1
position: 1202025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1202090:1
position: 1202090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1202727-1202889:1:exon

position:1202727:1
position: 1202727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1202889:1
position: 1202889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1204408-1204896:1:exon

position:1204408:1
position: 1204408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CD164L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CD164L2
product: CD164 molecule like 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030464507.1
SIO_010081: CD164L2
subclass of: SO_0000673
so part of: CD164L2
location: join(1199639..1199822,1201404..1201508,1201755..1201832,1202028..1202090,1202727..1202889,1204408..1204819)
location: region:1199639-1204819:1
so has part: feature:1199639-1199822:1:exon
so has part: feature:1201404-1201508:1:exon
so has part: feature:1201755-1201832:1:exon
so has part: feature:1202028-1202090:1:exon
so has part: feature:1202727-1202889:1:exon
so has part: feature:1204408-1204819:1:exon

position:1199639:1
position: 1199639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1204819:1
position: 1204819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1199639-1199822:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1201404-1201508:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1201755-1201832:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1202028-1202090:1:exon

position:1202028:1
position: 1202028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1202727-1202889:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1204408-1204819:1:exon

CD164L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CD164L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD164 sialomucin-like 2 protein isoform X1
translation: MAPPCGGAMLCALLCALLCAPTRAGGCRELRSCETCTASTASHNSSGCVWVGCGTPEEPGAGSCMQRGVAARETCELYNTSTLCPAALKSPTEEPPRSHSKEPTHPPRTTTSAPLTGSPEFHPPGFDTASFIGGIVLVLSVQAVVFFIIKFIKSKDSTYQTLI
SIO_010081: CD164L2
subclass of: SO_0000673
so part of: CD164L2
location: join(1199750..1199822,1201404..1201508,1201755..1201832,1202025..1202090,1202727..1202889,1204408..1204414)
location: region:1199750-1204414:1
so has part: feature:1199750-1199822:1:exon
so has part: feature:1201404-1201508:1:exon
so has part: feature:1201755-1201832:1:exon
so has part: feature:1202025-1202090:1:exon
so has part: feature:1202727-1202889:1:exon
so has part: feature:1204408-1204414:1:exon

XP_030320366.1
type: Protein
SIO_000068: ncbiprotein

position:1199750:1
position: 1199750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1204414:1
position: 1204414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1199750-1199822:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1201404-1201508:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1201755-1201832:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1202025-1202090:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1202727-1202889:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1204408-1204414:1:exon

CD164L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CD164L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD164 sialomucin-like 2 protein isoform X2
translation: MAPPCGGAMLCALLCALLCAPTRAGGCRELRSCETCTASTASHNSSGCVWVGCGTPEEPGAGSCMQRGVAARETCELYNTSTLCPALKSPTEEPPRSHSKEPTHPPRTTTSAPLTGSPEFHPPGFDTASFIGGIVLVLSVQAVVFFIIKFIKSKDSTYQTLI
SIO_010081: CD164L2
subclass of: SO_0000673
so part of: CD164L2
location: join(1199750..1199822,1201404..1201508,1201755..1201832,1202028..1202090,1202727..1202889,1204408..1204414)
location: region:1199750-1204414:1
so has part: feature:1199750-1199822:1:exon
so has part: feature:1201404-1201508:1:exon
so has part: feature:1201755-1201832:1:exon
so has part: feature:1202028-1202090:1:exon
so has part: feature:1202727-1202889:1:exon
so has part: feature:1204408-1204414:1:exon

XP_030320367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1199750-1199822:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1201404-1201508:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1201755-1201832:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1202028-1202090:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1202727-1202889:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1204408-1204414:1:exon

SYTL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SYTL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1205262..1211667)
location: region:1205262-1211667:-1
so has part: feature:1205262-1211667:-1:exon
subclass of: SO_0000010

103535519
type: Gene
SIO_000068: ncbigene

position:1205262:-1
position: 1205262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1211667:-1
position: 1211667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1205262-1211667:-1:exon

SYTL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SYTL1
product: synaptotagmin like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030464504.1
SIO_010081: SYTL1
subclass of: SO_0000673
so part of: SYTL1
location: complement(join(1205262..1205600,1205670..1205875,1205972..1206071,1206148..1206226,1206297..1206458,1206559..1206661,1206753..1206919,1207011..1207133,1207531..1207625,1207834..1207933,1208217..1208256,1208617..1208707,1208793..1208938,1209322..1209618,1211481..1211667))
location: region:1205262-1211667:-1
so has part: feature:1211481-1211667:-1:exon
so has part: feature:1209322-1209618:-1:exon
so has part: feature:1208793-1208938:-1:exon
so has part: feature:1208617-1208707:-1:exon
so has part: feature:1208217-1208256:-1:exon
so has part: feature:1207834-1207933:-1:exon
so has part: feature:1207531-1207625:-1:exon
so has part: feature:1207011-1207133:-1:exon
so has part: feature:1206753-1206919:-1:exon
so has part: feature:1206559-1206661:-1:exon
so has part: feature:1206297-1206458:-1:exon
so has part: feature:1206148-1206226:-1:exon
so has part: feature:1205972-1206071:-1:exon
so has part: feature:1205670-1205875:-1:exon
so has part: feature:1205262-1205600:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1211481-1211667:-1:exon

position:1211481:-1
position: 1211481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1209322-1209618:-1:exon

position:1209322:-1
position: 1209322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1209618:-1
position: 1209618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1208793-1208938:-1:exon

position:1208793:-1
position: 1208793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208938:-1
position: 1208938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1208617-1208707:-1:exon

position:1208617:-1
position: 1208617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208707:-1
position: 1208707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1208217-1208256:-1:exon

position:1208217:-1
position: 1208217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208256:-1
position: 1208256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1207834-1207933:-1:exon

position:1207834:-1
position: 1207834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207933:-1
position: 1207933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1207531-1207625:-1:exon

position:1207531:-1
position: 1207531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207625:-1
position: 1207625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1207011-1207133:-1:exon

position:1207011:-1
position: 1207011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207133:-1
position: 1207133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1206753-1206919:-1:exon

position:1206753:-1
position: 1206753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206919:-1
position: 1206919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1206559-1206661:-1:exon

position:1206559:-1
position: 1206559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206661:-1
position: 1206661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1206297-1206458:-1:exon

position:1206297:-1
position: 1206297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206458:-1
position: 1206458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1206148-1206226:-1:exon

position:1206148:-1
position: 1206148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206226:-1
position: 1206226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1205972-1206071:-1:exon

position:1205972:-1
position: 1205972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206071:-1
position: 1206071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1205670-1205875:-1:exon

position:1205670:-1
position: 1205670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205875:-1
position: 1205875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1205262-1205600:-1:exon

position:1205600:-1
position: 1205600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SYTL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SYTL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-like protein 1
translation: MLASLVHARHAEHPRLQPPTSQHPPGPVPRGDPAVSPRPTMALELGTEALLDLSFLTEEEQIAITEVLRRDWQLRRREEGRISKLRKSVSDPVRLRILTGDWFCDARAQRHRHHLGSDLVRASIRRRRRPRGDTERGFSLGELEEPLAEEKEDEDGVEQEESPPLEQTQAATEPQPNPAAPALEGTPLSQPLWQGDIPVREQDSPAQPGGTEGGNPFDSSSAEEEEDEPNTTHSGPDAGQGLETPQMDQAPSGWVSPSNGHTSPGSVLTTSSSISSLSSSTLSGSLMSLYSEGELGRVAVRGCVQFSLCYDGAKKELQVHVLRCRELAEAKRQRSDPYIKTYLLPDKSNRSKRKTTVRKRSLDPIFNETLKYKLEKRDLQGRTLNLSVWHHDSLGRNLFLGEVEIALGAWDWANTRPEWFSLQPRMPISSNGLASRGNLNLALKFIPAGSEGKGLPPTGELHIWVKDAQSLVPLQSSTVDAFVQCYVLPDDSKASRQKTRVVKRSLNPLFNHTMVYDGFQAKDLAEACAEFTLWHHEAFSKRQLGGIRLSLGTGSSYGLPVGWMDSTAEERGVWGKLLQQPGHWVEALLPLRTNLVPRG
SIO_010081: SYTL1
subclass of: SO_0000673
so part of: SYTL1
location: complement(join(1205461..1205600,1205670..1205875,1205972..1206071,1206148..1206226,1206297..1206458,1206559..1206661,1206753..1206919,1207011..1207133,1207531..1207625,1207834..1207933,1208217..1208256,1208617..1208707,1208793..1208938,1209322..1209569))
location: region:1205461-1209569:-1
so has part: feature:1209322-1209569:-1:exon
so has part: feature:1208793-1208938:-1:exon
so has part: feature:1208617-1208707:-1:exon
so has part: feature:1208217-1208256:-1:exon
so has part: feature:1207834-1207933:-1:exon
so has part: feature:1207531-1207625:-1:exon
so has part: feature:1207011-1207133:-1:exon
so has part: feature:1206753-1206919:-1:exon
so has part: feature:1206559-1206661:-1:exon
so has part: feature:1206297-1206458:-1:exon
so has part: feature:1206148-1206226:-1:exon
so has part: feature:1205972-1206071:-1:exon
so has part: feature:1205670-1205875:-1:exon
so has part: feature:1205461-1205600:-1:exon

XP_030320364.1
type: Protein
SIO_000068: ncbiprotein

position:1205461:-1
position: 1205461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1209569:-1
position: 1209569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1209322-1209569:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1208793-1208938:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1208617-1208707:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1208217-1208256:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1207834-1207933:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1207531-1207625:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1207011-1207133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1206753-1206919:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1206559-1206661:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1206297-1206458:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1206148-1206226:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1205972-1206071:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1205670-1205875:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1205461-1205600:-1:exon

TMEM222
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: TMEM222
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1215490..1225307)
location: region:1215490-1225307:-1
so has part: feature:1215490-1225307:-1:exon
subclass of: SO_0000010

103535484
type: Gene
SIO_000068: ncbigene

position:1215490:-1
position: 1215490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1225307:-1
position: 1225307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1215490-1225307:-1:exon

TMEM222
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TMEM222
product: transmembrane protein 222, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 long SRA read, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030464495.1
SIO_010081: TMEM222
subclass of: SO_0000673
so part of: TMEM222
location: complement(join(1215490..1218306,1219111..1219241,1219411..1219507,1220241..1220272,1220931..1221015,1225174..1225307))
location: region:1215490-1225307:-1
so has part: feature:1225174-1225307:-1:exon
so has part: feature:1220931-1221015:-1:exon
so has part: feature:1220241-1220272:-1:exon
so has part: feature:1219411-1219507:-1:exon
so has part: feature:1219111-1219241:-1:exon
so has part: feature:1215490-1218306:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1225174-1225307:-1:exon

position:1225174:-1
position: 1225174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1220931-1221015:-1:exon

position:1220931:-1
position: 1220931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1221015:-1
position: 1221015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1220241-1220272:-1:exon

position:1220241:-1
position: 1220241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1220272:-1
position: 1220272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1219411-1219507:-1:exon

position:1219411:-1
position: 1219411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1219507:-1
position: 1219507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1219111-1219241:-1:exon

position:1219111:-1
position: 1219111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1219241:-1
position: 1219241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1215490-1218306:-1:exon

position:1218306:-1
position: 1218306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM222
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TMEM222
product: transmembrane protein 222, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464494.1
SIO_010081: TMEM222
subclass of: SO_0000673
so part of: TMEM222
location: complement(join(1215490..1216282,1219111..1219241,1219411..1219507,1220241..1220272,1220931..1221015,1225174..1225299))
location: region:1215490-1225299:-1
so has part: feature:1225174-1225299:-1:exon
so has part: feature:1220931-1221015:-1:exon
so has part: feature:1220241-1220272:-1:exon
so has part: feature:1219411-1219507:-1:exon
so has part: feature:1219111-1219241:-1:exon
so has part: feature:1215490-1216282:-1:exon

position:1225299:-1
position: 1225299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1225174-1225299:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1220931-1221015:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1220241-1220272:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1219411-1219507:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1219111-1219241:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1215490-1216282:-1:exon

position:1216282:-1
position: 1216282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM222
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TMEM222
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 222 isoform X1
translation: MAEAEAKMKQFNGGGGGSGLDTERGRFPYCVVWTPIPVLTWLFPIIGHMGICTSTGVIRDFAGPYFVSEDNMAFGKPVKYWKLDPNKVYSTGPNAWDTAVHDASEEYKHRMHNLCCDNCHSHVALALNLMRYDNSTSWNMVKLCFFSLLYGKYVREDFSVLPKMHSESLALGLQPNPSSAVAITLRLLGAVSHLGSVFYGFICTRVAKAQAWSWWGKPGAGLLVTLPAPGTCKNPVECHFPPPRGNPPPAPKALVVCFFTRSGVQMETSGAVNVPCRWWGCWLGREGRVSPQSQLNTPFQPRTPGFGRWGKG
SIO_010081: TMEM222
subclass of: SO_0000673
so part of: TMEM222
location: complement(join(1215808..1216282,1219111..1219241,1219411..1219507,1220241..1220272,1220931..1221015,1225174..1225292))
location: region:1215808-1225292:-1
so has part: feature:1225174-1225292:-1:exon
so has part: feature:1220931-1221015:-1:exon
so has part: feature:1220241-1220272:-1:exon
so has part: feature:1219411-1219507:-1:exon
so has part: feature:1219111-1219241:-1:exon
so has part: feature:1215808-1216282:-1:exon

XP_030320354.1
type: Protein
SIO_000068: ncbiprotein

position:1215808:-1
position: 1215808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1225292:-1
position: 1225292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1225174-1225292:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1220931-1221015:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1220241-1220272:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1219411-1219507:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1219111-1219241:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1215808-1216282:-1:exon

TMEM222
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TMEM222
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 222 isoform X2
translation: MAEAEAKMKQFNGGGGGSGLDTERGRFPYCVVWTPIPVLTWLFPIIGHMGICTSTGVIRDFAGPYFVSEDNMAFGKPVKYWKLDPNKVYSTGPNAWDTAVHDASEEYKHRMHNLCCDNCHSHVALALNLMRYDNSTSWNMVKLCFFSLLYGKYVSVGGFVKTWLPFVLFLGVIVTVVLTLHLR
SIO_010081: TMEM222
subclass of: SO_0000673
so part of: TMEM222
location: complement(join(1218219..1218306,1219111..1219241,1219411..1219507,1220241..1220272,1220931..1221015,1225174..1225292))
location: region:1218219-1225292:-1
so has part: feature:1225174-1225292:-1:exon
so has part: feature:1220931-1221015:-1:exon
so has part: feature:1220241-1220272:-1:exon
so has part: feature:1219411-1219507:-1:exon
so has part: feature:1219111-1219241:-1:exon
so has part: feature:1218219-1218306:-1:exon

XP_030320355.1
type: Protein
SIO_000068: ncbiprotein

position:1218219:-1
position: 1218219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1225174-1225292:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1220931-1221015:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1220241-1220272:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1219411-1219507:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1219111-1219241:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1218219-1218306:-1:exon

WDTC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: WDTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1231233..1257319)
location: region:1231233-1257319:-1
so has part: feature:1231233-1257319:-1:exon
subclass of: SO_0000010

103535520
type: Gene
SIO_000068: ncbigene

position:1231233:-1
position: 1231233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1257319:-1
position: 1257319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1231233-1257319:-1:exon

WDTC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: WDTC1
product: WD and tetratricopeptide repeats 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 23 ESTs, 7 long SRA reads, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030464389.1
SIO_010081: WDTC1
subclass of: SO_0000673
so part of: WDTC1
location: complement(join(1231233..1234310,1234466..1234658,1235085..1235253,1235615..1235850,1238949..1239122,1240276..1240372,1242295..1242370,1243490..1243605,1244870..1244964,1245264..1245446,1246502..1246689,1246822..1246933,1248079..1248125,1249069..1249152,1251339..1251486,1257038..1257319))
location: region:1231233-1257319:-1
so has part: feature:1257038-1257319:-1:exon
so has part: feature:1251339-1251486:-1:exon
so has part: feature:1249069-1249152:-1:exon
so has part: feature:1248079-1248125:-1:exon
so has part: feature:1246822-1246933:-1:exon
so has part: feature:1246502-1246689:-1:exon
so has part: feature:1245264-1245446:-1:exon
so has part: feature:1244870-1244964:-1:exon
so has part: feature:1243490-1243605:-1:exon
so has part: feature:1242295-1242370:-1:exon
so has part: feature:1240276-1240372:-1:exon
so has part: feature:1238949-1239122:-1:exon
so has part: feature:1235615-1235850:-1:exon
so has part: feature:1235085-1235253:-1:exon
so has part: feature:1234466-1234658:-1:exon
so has part: feature:1231233-1234310:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1257038-1257319:-1:exon

position:1257038:-1
position: 1257038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1251339-1251486:-1:exon

position:1251339:-1
position: 1251339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1251486:-1
position: 1251486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1249069-1249152:-1:exon

position:1249069:-1
position: 1249069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1249152:-1
position: 1249152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1248079-1248125:-1:exon

position:1248079:-1
position: 1248079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1248125:-1
position: 1248125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1246822-1246933:-1:exon

position:1246822:-1
position: 1246822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1246933:-1
position: 1246933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1246502-1246689:-1:exon

position:1246502:-1
position: 1246502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1246689:-1
position: 1246689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1245264-1245446:-1:exon

position:1245264:-1
position: 1245264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1245446:-1
position: 1245446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1244870-1244964:-1:exon

position:1244870:-1
position: 1244870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1244964:-1
position: 1244964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1243490-1243605:-1:exon

position:1243490:-1
position: 1243490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1243605:-1
position: 1243605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1242295-1242370:-1:exon

position:1242295:-1
position: 1242295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1242370:-1
position: 1242370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1240276-1240372:-1:exon

position:1240276:-1
position: 1240276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1240372:-1
position: 1240372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1238949-1239122:-1:exon

position:1238949:-1
position: 1238949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1239122:-1
position: 1239122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1235615-1235850:-1:exon

position:1235615:-1
position: 1235615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1235850:-1
position: 1235850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1235085-1235253:-1:exon

position:1235085:-1
position: 1235085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1235253:-1
position: 1235253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1234466-1234658:-1:exon

position:1234466:-1
position: 1234466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1234658:-1
position: 1234658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1231233-1234310:-1:exon

position:1234310:-1
position: 1234310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WDTC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: WDTC1
product: WD and tetratricopeptide repeats 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 23 ESTs, 1 long SRA read, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030464390.1
SIO_010081: WDTC1
subclass of: SO_0000673
so part of: WDTC1
location: complement(join(1231233..1234310,1234466..1234658,1235085..1235253,1235615..1235850,1238949..1239122,1240276..1240372,1242295..1242370,1243490..1243605,1244870..1244964,1245264..1245446,1246502..1246689,1246822..1246933,1248079..1248125,1249069..1249152,1251339..1251486,1256496..1256699))
location: region:1231233-1256699:-1
so has part: feature:1256496-1256699:-1:exon
so has part: feature:1251339-1251486:-1:exon
so has part: feature:1249069-1249152:-1:exon
so has part: feature:1248079-1248125:-1:exon
so has part: feature:1246822-1246933:-1:exon
so has part: feature:1246502-1246689:-1:exon
so has part: feature:1245264-1245446:-1:exon
so has part: feature:1244870-1244964:-1:exon
so has part: feature:1243490-1243605:-1:exon
so has part: feature:1242295-1242370:-1:exon
so has part: feature:1240276-1240372:-1:exon
so has part: feature:1238949-1239122:-1:exon
so has part: feature:1235615-1235850:-1:exon
so has part: feature:1235085-1235253:-1:exon
so has part: feature:1234466-1234658:-1:exon
so has part: feature:1231233-1234310:-1:exon

position:1256699:-1
position: 1256699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1256496-1256699:-1:exon

position:1256496:-1
position: 1256496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1251339-1251486:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1249069-1249152:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1248079-1248125:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1246822-1246933:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1246502-1246689:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1245264-1245446:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1244870-1244964:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1243490-1243605:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1242295-1242370:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1240276-1240372:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1238949-1239122:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1235615-1235850:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1235085-1235253:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1234466-1234658:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1231233-1234310:-1:exon

WDTC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: WDTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD and tetratricopeptide repeats protein 1
translation: MLGCTAALPIAPFHLPHCTKMAKANITRDIIHRQIKERGALGFERHYHVTDPFIRRLGLEAELQGHSGCVNCLEWNEKGDLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANIFSVKFLPHSGDRILITGAADSKVHVHDLTVKETIHMFGDHTNRVKRIATAPMWPNTFWSAAEDGLIRQYDLRENSKRSEVLIDLTEYCGQLVEAKCLTVNPQDNNYLAVGASGPFVRLYDIRMIHNHRKSMKQSPSAGVHTFCDRQKPLPDGAAQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPDGTELLVNMGGEQVYLFDLTYKQRPYTFLLPKKCHTSGEVQNGKTSTNGVSNGIHLHSNGFRLSEGRAHVSPQVELPPYLERIKQQANEAFACQLWTQAIQLYSKAVQKAPNNAMLYGNRAAAYMKRKWDGDHYDALRDCLKAISLNPCHLKAHFRLARCLFELKYVAEALECLDDFKGKFPEQAHSSACDALDRDINAALFSKSDNTEDKKGGGPIRLRATGRKDSISEDEMVLRERSYDYKFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPHPSYCFLATSGIDPVVRLWNPRPESETLNGRVVVDMEGASQANQRRMNADPLEVMLLNMGYRITGLTSGGAGGSDDEDSSEGQVQCRPS
SIO_010081: WDTC1
subclass of: SO_0000673
so part of: WDTC1
location: complement(join(1234113..1234310,1234466..1234658,1235085..1235253,1235615..1235850,1238949..1239122,1240276..1240372,1242295..1242370,1243490..1243605,1244870..1244964,1245264..1245446,1246502..1246689,1246822..1246933,1248079..1248125,1249069..1249152,1251339..1251446))
location: region:1234113-1251446:-1
so has part: feature:1251339-1251446:-1:exon
so has part: feature:1249069-1249152:-1:exon
so has part: feature:1248079-1248125:-1:exon
so has part: feature:1246822-1246933:-1:exon
so has part: feature:1246502-1246689:-1:exon
so has part: feature:1245264-1245446:-1:exon
so has part: feature:1244870-1244964:-1:exon
so has part: feature:1243490-1243605:-1:exon
so has part: feature:1242295-1242370:-1:exon
so has part: feature:1240276-1240372:-1:exon
so has part: feature:1238949-1239122:-1:exon
so has part: feature:1235615-1235850:-1:exon
so has part: feature:1235085-1235253:-1:exon
so has part: feature:1234466-1234658:-1:exon
so has part: feature:1234113-1234310:-1:exon

XP_030320249.1
type: Protein
SIO_000068: ncbiprotein

position:1234113:-1
position: 1234113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1251446:-1
position: 1251446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1251339-1251446:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1249069-1249152:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1248079-1248125:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1246822-1246933:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1246502-1246689:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1245264-1245446:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1244870-1244964:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1243490-1243605:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1242295-1242370:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1240276-1240372:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1238949-1239122:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1235615-1235850:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1235085-1235253:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1234466-1234658:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1234113-1234310:-1:exon

WDTC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: WDTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD and tetratricopeptide repeats protein 1
translation: MLGCTAALPIAPFHLPHCTKMAKANITRDIIHRQIKERGALGFERHYHVTDPFIRRLGLEAELQGHSGCVNCLEWNEKGDLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANIFSVKFLPHSGDRILITGAADSKVHVHDLTVKETIHMFGDHTNRVKRIATAPMWPNTFWSAAEDGLIRQYDLRENSKRSEVLIDLTEYCGQLVEAKCLTVNPQDNNYLAVGASGPFVRLYDIRMIHNHRKSMKQSPSAGVHTFCDRQKPLPDGAAQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPDGTELLVNMGGEQVYLFDLTYKQRPYTFLLPKKCHTSGEVQNGKTSTNGVSNGIHLHSNGFRLSEGRAHVSPQVELPPYLERIKQQANEAFACQLWTQAIQLYSKAVQKAPNNAMLYGNRAAAYMKRKWDGDHYDALRDCLKAISLNPCHLKAHFRLARCLFELKYVAEALECLDDFKGKFPEQAHSSACDALDRDINAALFSKSDNTEDKKGGGPIRLRATGRKDSISEDEMVLRERSYDYKFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPHPSYCFLATSGIDPVVRLWNPRPESETLNGRVVVDMEGASQANQRRMNADPLEVMLLNMGYRITGLTSGGAGGSDDEDSSEGQVQCRPS
SIO_010081: WDTC1
subclass of: SO_0000673
so part of: WDTC1
location: complement(join(1234113..1234310,1234466..1234658,1235085..1235253,1235615..1235850,1238949..1239122,1240276..1240372,1242295..1242370,1243490..1243605,1244870..1244964,1245264..1245446,1246502..1246689,1246822..1246933,1248079..1248125,1249069..1249152,1251339..1251446))
location: region:1234113-1251446:-1
so has part: feature:1251339-1251446:-1:exon
so has part: feature:1249069-1249152:-1:exon
so has part: feature:1248079-1248125:-1:exon
so has part: feature:1246822-1246933:-1:exon
so has part: feature:1246502-1246689:-1:exon
so has part: feature:1245264-1245446:-1:exon
so has part: feature:1244870-1244964:-1:exon
so has part: feature:1243490-1243605:-1:exon
so has part: feature:1242295-1242370:-1:exon
so has part: feature:1240276-1240372:-1:exon
so has part: feature:1238949-1239122:-1:exon
so has part: feature:1235615-1235850:-1:exon
so has part: feature:1235085-1235253:-1:exon
so has part: feature:1234466-1234658:-1:exon
so has part: feature:1234113-1234310:-1:exon

XP_030320250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1251339-1251446:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1249069-1249152:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1248079-1248125:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1246822-1246933:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1246502-1246689:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1245264-1245446:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1244870-1244964:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1243490-1243605:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1242295-1242370:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1240276-1240372:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1238949-1239122:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1235615-1235850:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1235085-1235253:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1234466-1234658:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1234113-1234310:-1:exon

LOC115599576
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599576
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1257551..1258956
location: region:1257551-1258956:1
so has part: feature:1257551-1258956:1:exon
subclass of: SO_0000011

115599576
type: Gene
SIO_000068: ncbigene

position:1257551:1
position: 1257551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1258956:1
position: 1258956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1257551-1258956:1:exon

LOC115599576
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599576
product: uncharacterized LOC115599576
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003988504.1
SIO_010081: LOC115599576
subclass of: SO_0000673
so part of: LOC115599576
location: join(1257551..1257984,1258364..1258482,1258867..1258956)
location: region:1257551-1258956:1
so has part: feature:1257551-1257984:1:exon
so has part: feature:1258364-1258482:1:exon
so has part: feature:1258867-1258956:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1257551-1257984:1:exon

position:1257984:1
position: 1257984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1258364-1258482:1:exon

position:1258364:1
position: 1258364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1258482:1
position: 1258482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1258867-1258956:1:exon

position:1258867:1
position: 1258867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115599577
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599577
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1258778..1264704)
location: region:1258778-1264704:-1
so has part: feature:1258778-1264704:-1:exon
subclass of: SO_0000011

115599577
type: Gene
SIO_000068: ncbigene

position:1258778:-1
position: 1258778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1264704:-1
position: 1264704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1258778-1264704:-1:exon

LOC115599577
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599577
product: uncharacterized LOC115599577, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003988508.1
SIO_010081: LOC115599577
subclass of: SO_0000673
so part of: LOC115599577
location: complement(join(1258778..1260794,1260976..1261369,1264458..1264704))
location: region:1258778-1264704:-1
so has part: feature:1264458-1264704:-1:exon
so has part: feature:1260976-1261369:-1:exon
so has part: feature:1258778-1260794:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1264458-1264704:-1:exon

position:1264458:-1
position: 1264458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1260976-1261369:-1:exon

position:1260976:-1
position: 1260976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1261369:-1
position: 1261369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1258778-1260794:-1:exon

position:1260794:-1
position: 1260794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115599577
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599577
product: uncharacterized LOC115599577, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_003988505.1
SIO_010081: LOC115599577
subclass of: SO_0000673
so part of: LOC115599577
location: complement(join(1258778..1261369,1264458..1264704))
location: region:1258778-1264704:-1
so has part: feature:1264458-1264704:-1:exon
so has part: feature:1258778-1261369:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1264458-1264704:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1258778-1261369:-1:exon

LOC115599577
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599577
product: uncharacterized LOC115599577, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_003988507.1
SIO_010081: LOC115599577
subclass of: SO_0000673
so part of: LOC115599577
location: complement(join(1258778..1261369,1263693..1263763))
location: region:1258778-1263763:-1
so has part: feature:1263693-1263763:-1:exon
so has part: feature:1258778-1261369:-1:exon

position:1263763:-1
position: 1263763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1263693-1263763:-1:exon

position:1263693:-1
position: 1263693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1258778-1261369:-1:exon

LOC115599577
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599577
product: uncharacterized LOC115599577, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988506.1
SIO_010081: LOC115599577
subclass of: SO_0000673
so part of: LOC115599577
location: complement(join(1258778..1261369,1261570..1261710))
location: region:1258778-1261710:-1
so has part: feature:1261570-1261710:-1:exon
so has part: feature:1258778-1261369:-1:exon

position:1261710:-1
position: 1261710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1261570-1261710:-1:exon

position:1261570:-1
position: 1261570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1258778-1261369:-1:exon

SLC9A1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SLC9A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1262641..1292121
location: region:1262641-1292121:1
so has part: feature:1262641-1292121:1:exon
subclass of: SO_0000010

103535521
type: Gene
SIO_000068: ncbigene

position:1262641:1
position: 1262641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1292121:1
position: 1292121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1262641-1292121:1:exon

SLC9A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SLC9A1
product: solute carrier family 9 member A1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 1 long SRA read, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_030464388.1
SIO_010081: SLC9A1
subclass of: SO_0000673
so part of: SLC9A1
location: join(1262641..1262953,1283636..1284096,1285325..1285575,1286057..1286274,1286618..1286820,1287270..1287359,1287743..1287813,1288258..1288431,1288562..1288676,1289151..1289252,1289542..1289614,1290402..1292121)
location: region:1262641-1292121:1
so has part: feature:1262641-1262953:1:exon
so has part: feature:1283636-1284096:1:exon
so has part: feature:1285325-1285575:1:exon
so has part: feature:1286057-1286274:1:exon
so has part: feature:1286618-1286820:1:exon
so has part: feature:1287270-1287359:1:exon
so has part: feature:1287743-1287813:1:exon
so has part: feature:1288258-1288431:1:exon
so has part: feature:1288562-1288676:1:exon
so has part: feature:1289151-1289252:1:exon
so has part: feature:1289542-1289614:1:exon
so has part: feature:1290402-1292121:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1262641-1262953:1:exon

position:1262953:1
position: 1262953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1283636-1284096:1:exon

position:1283636:1
position: 1283636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1284096:1
position: 1284096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1285325-1285575:1:exon

position:1285325:1
position: 1285325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1285575:1
position: 1285575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1286057-1286274:1:exon

position:1286057:1
position: 1286057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1286274:1
position: 1286274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1286618-1286820:1:exon

position:1286618:1
position: 1286618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1286820:1
position: 1286820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1287270-1287359:1:exon

position:1287270:1
position: 1287270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1287359:1
position: 1287359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1287743-1287813:1:exon

position:1287743:1
position: 1287743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1287813:1
position: 1287813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1288258-1288431:1:exon

position:1288258:1
position: 1288258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1288431:1
position: 1288431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1288562-1288676:1:exon

position:1288562:1
position: 1288562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1288676:1
position: 1288676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1289151-1289252:1:exon

position:1289151:1
position: 1289151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1289252:1
position: 1289252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1289542-1289614:1:exon

position:1289542:1
position: 1289542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1289614:1
position: 1289614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1290402-1292121:1:exon

position:1290402:1
position: 1290402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC9A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SLC9A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/hydrogen exchanger 1
translation: MGAAALRALPWALLLVLGPLLPGQGLQASEPPQGQPDPVPGGFTPAPPASAQEIHPLNKQPANGSGEGHAKPRKAFPVLGIDYDHVRTPFEISLWILLACLMKLGFHVIPSVSNIVPESCLLIVVGLLVGGLIKGVGEKPPILNSDIFFLFLLPPIILDAGYFLPLRQFTENLGTILIFAVVGTLWNAFFLGGLMYAVCQLGGPGLNHIGLLANLLFGSIISAVDPVAVLAVFEEIHINELLHILVFGESLLNDAVTVVLYHLFEEFATFEQVTIIDILLGFFSFFVVSLGGVFVGVIYGVITAFTSRFTSHIRVIEPLFVFLYSYMAYLSAELFHLSGIMALIASGVVMRPYVEANISHKSHTTIKYFLKMWSSVSETLIFIFLGVSTVAGHHYWNWTFVISTLLFCLIARVLGVLVLTWFINKFRIVKLTPKDQFIIAYGGLRGAIAFSLCYLLDYKHFGMRDMFLTAIITVIFFTVFVQGMTIRPLVDLLAVKKKQETKRSINEEIHTQFLDHLLTGIEDICGHYGHHHWKDKLNRFNKKYVKKCLIAGERSKEPQLIAFYHKMEMKQAIELVESGGIGKIPSAVSTVSIQNINPKTLPVERILPALSKDKEEEIRKILRNNLQKTRQRLRSYNRHTLVADPYEEAWNQMLLRRQKARQLEQKMNNYLTVPAHRLDSPTMSRARIGSDPLAYEPKADSENLPIITIDPASPQSPESVDLMNEEPKGCGGLPPSPEEDEEGLVMRVKEPSSPGTDDVFTPGTGDSPSNQRMLRCLSDPGPRPEPEEGEPFIPKGQ
SIO_010081: SLC9A1
subclass of: SO_0000673
so part of: SLC9A1
location: join(1262641..1262953,1283636..1284096,1285325..1285575,1286057..1286274,1286618..1286820,1287270..1287359,1287743..1287813,1288258..1288431,1288562..1288676,1289151..1289252,1289542..1289614,1290402..1290724)
location: region:1262641-1290724:1
so has part: feature:1262641-1262953:1:exon
so has part: feature:1283636-1284096:1:exon
so has part: feature:1285325-1285575:1:exon
so has part: feature:1286057-1286274:1:exon
so has part: feature:1286618-1286820:1:exon
so has part: feature:1287270-1287359:1:exon
so has part: feature:1287743-1287813:1:exon
so has part: feature:1288258-1288431:1:exon
so has part: feature:1288562-1288676:1:exon
so has part: feature:1289151-1289252:1:exon
so has part: feature:1289542-1289614:1:exon
so has part: feature:1290402-1290724:1:exon

XP_030320248.1
type: Protein
SIO_000068: ncbiprotein

position:1290724:1
position: 1290724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1262641-1262953:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1283636-1284096:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1285325-1285575:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1286057-1286274:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1286618-1286820:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1287270-1287359:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1287743-1287813:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1288258-1288431:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1288562-1288676:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1289151-1289252:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1289542-1289614:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1290402-1290724:1:exon

TENT5B
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: TENT5B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1298229..1303291
location: region:1298229-1303291:1
so has part: feature:1298229-1303291:1:exon
subclass of: SO_0000010

103535523
type: Gene
SIO_000068: ncbigene

position:1298229:1
position: 1298229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1303291:1
position: 1303291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1298229-1303291:1:exon

TENT5B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TENT5B
product: terminal nucleotidyltransferase 5B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030464237.1
SIO_010081: TENT5B
subclass of: SO_0000673
so part of: TENT5B
location: join(1298229..1298432,1302205..1303291)
location: region:1298229-1303291:1
so has part: feature:1298229-1298432:1:exon
so has part: feature:1302205-1303291:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1298229-1298432:1:exon

position:1298432:1
position: 1298432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1302205-1303291:1:exon

position:1302205:1
position: 1302205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TENT5B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TENT5B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: terminal nucleotidyltransferase 5B
translation: MLAAAAAEEAAAGGGGPSAGSSEQSGGRFSVLSWEQVQRLDQILGEAVPIHGRGNFPTLSVRPRTIVQVVRSRLEKKGILVHNVRLNGSAASHVLHQDSGLGYKDLDLIFGVDLKTEDVFQLVKDVVMDCLLDFLPEGVNKDKITPMTLKEAYVQKLVKVCNETDRWSLISLSNNSGKNVELKFVDSLRRQFEFSVDSFQIILDSLLLFGECSENPMAENFHPTVTGESMYGDFEEAMDHLRNRTIATRNPEEIRGGGLLKYCNLLVRGFKPKSEVDMKALQRYMCSRFFIDFSDIGEQQRKLECYLQSHFVGMESKRYDYLMTLHRVVNESTVCLMGHERRQTLNLIAMLAVRVLAEQNIIPTVTNVTCYYQPAPYISEINFNYYVTHVQPFLPCNQSYPTWLPCN
SIO_010081: TENT5B
subclass of: SO_0000673
so part of: TENT5B
location: join(1298229..1298432,1302205..1303224)
location: region:1298229-1303224:1
so has part: feature:1298229-1298432:1:exon
so has part: feature:1302205-1303224:1:exon

XP_030320097.1
type: Protein
SIO_000068: ncbiprotein

position:1303224:1
position: 1303224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1298229-1298432:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1302205-1303224:1:exon

TRNP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: TRNP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1312369..1312881)
location: region:1312369-1312881:-1
so has part: feature:1312369-1312881:-1:exon
subclass of: SO_0000010

115599569
type: Gene
SIO_000068: ncbigene

position:1312369:-1
position: 1312369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1312881:-1
position: 1312881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1312369-1312881:-1:exon

TRNP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TRNP1
product: TMF1 regulated nuclear protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 69% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030464238.1
SIO_010081: TRNP1
subclass of: SO_0000673
so part of: TRNP1
location: complement(1312369..1312881)
location: region:1312369-1312881:-1
so has part: feature:1312369-1312881:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1312369-1312881:-1:exon

TRNP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TRNP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TMF-regulated nuclear protein 1
translation: MAAAADPAAGGHQGPDSSARGSGNTNTGTGGTGNGSNGDGTGGPGSVELAAARRRLIAAEGRRRAAAELEGRVRQVHCALLHAELRLAARAEALGRLGAGVAQAQLALAAQSQRLQKGLRRRPRPRPAALLAAARALRSCVPWAPSRTRPATSAATAGRRLPAAPRGTA
SIO_010081: TRNP1
subclass of: SO_0000673
so part of: TRNP1
location: complement(1312369..1312878)
location: region:1312369-1312878:-1
so has part: feature:1312369-1312878:-1:exon

XP_030320098.1
type: Protein
SIO_000068: ncbiprotein

position:1312878:-1
position: 1312878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1312369-1312878:-1:exon

KDF1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: KDF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1316601..1325123
location: region:1316601-1325123:1
so has part: feature:1316601-1325123:1:exon
subclass of: SO_0000010

103535524
type: Gene
SIO_000068: ncbigene

position:1316601:1
position: 1316601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1325123:1
position: 1325123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1316601-1325123:1:exon

KDF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: KDF1
product: keratinocyte differentiation factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030464579.1
SIO_010081: KDF1
subclass of: SO_0000673
so part of: KDF1
location: join(1316601..1316672,1317695..1317855,1319756..1320865,1321741..1321815,1322845..1325123)
location: region:1316601-1325123:1
so has part: feature:1316601-1316672:1:exon
so has part: feature:1317695-1317855:1:exon
so has part: feature:1319756-1320865:1:exon
so has part: feature:1321741-1321815:1:exon
so has part: feature:1322845-1325123:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1316601-1316672:1:exon

position:1316672:1
position: 1316672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1317695-1317855:1:exon

position:1317695:1
position: 1317695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1317855:1
position: 1317855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1319756-1320865:1:exon

position:1319756:1
position: 1319756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1320865:1
position: 1320865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1321741-1321815:1:exon

position:1321741:1
position: 1321741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1321815:1
position: 1321815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1322845-1325123:1:exon

position:1322845:1
position: 1322845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KDF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: KDF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: keratinocyte differentiation factor 1
translation: MLGRRTRPPHDLHSPRQLSPPPPEALSLRPRASQEVDVSLEVFSGSTPELKQSRSTRAQQQRERRGRRAELKDSNGREAETITFIPGPTEAPPNQSVCCSSLAQAWNTYKAVFCCIVTCGGCFQDCSVCIPYPGPAETSPEEGKNGDYNGRLPNSPASASPAEKNGNQIKKSSMGSSFSYPDVKLKGIPVYQNRSPSHHLEADSCCKDLLADKPLRNSIEKPPLPSSHRSSEEYYSFHESDLDISELNGSMSSREIDVLIFKKLTELFSVHQIDELAKCTSDTVFLEKTNKISDLINSITQDYNLDEQDAECRLVRGIIRISTRKSRVRPQISIPASQSHQEKSSRGNAPDSGNETMLESMVISQDDLAVQISEETPADVMARNMRRHSRAGSPTSRDSSFQDTETDSSGAPLLQVYC
SIO_010081: KDF1
subclass of: SO_0000673
so part of: KDF1
location: join(1319767..1320865,1321741..1321815,1322845..1322927)
location: region:1319767-1322927:1
so has part: feature:1319767-1320865:1:exon
so has part: feature:1321741-1321815:1:exon
so has part: feature:1322845-1322927:1:exon

XP_030320439.1
type: Protein
SIO_000068: ncbiprotein

position:1319767:1
position: 1319767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1322927:1
position: 1322927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1319767-1320865:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1321741-1321815:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1322845-1322927:1:exon

NUDC
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: NUDC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1329941..1339161)
location: region:1329941-1339161:-1
so has part: feature:1329941-1339161:-1:exon
subclass of: SO_0000010

103535485
type: Gene
SIO_000068: ncbigene

position:1329941:-1
position: 1329941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1339161:-1
position: 1339161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1329941-1339161:-1:exon

NUDC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NUDC
product: nuclear distribution C, dynein complex regulator
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 1 long SRA read, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030464471.1
SIO_010081: NUDC
subclass of: SO_0000673
so part of: NUDC
location: complement(join(1329941..1330897,1332418..1332536,1332731..1332814,1333425..1333619,1334013..1334126,1334437..1334520,1335703..1335903,1338292..1338369,1339017..1339161))
location: region:1329941-1339161:-1
so has part: feature:1339017-1339161:-1:exon
so has part: feature:1338292-1338369:-1:exon
so has part: feature:1335703-1335903:-1:exon
so has part: feature:1334437-1334520:-1:exon
so has part: feature:1334013-1334126:-1:exon
so has part: feature:1333425-1333619:-1:exon
so has part: feature:1332731-1332814:-1:exon
so has part: feature:1332418-1332536:-1:exon
so has part: feature:1329941-1330897:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1339017-1339161:-1:exon

position:1339017:-1
position: 1339017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1338292-1338369:-1:exon

position:1338292:-1
position: 1338292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1338369:-1
position: 1338369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1335703-1335903:-1:exon

position:1335703:-1
position: 1335703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1335903:-1
position: 1335903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1334437-1334520:-1:exon

position:1334437:-1
position: 1334437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1334520:-1
position: 1334520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1334013-1334126:-1:exon

position:1334013:-1
position: 1334013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1334126:-1
position: 1334126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1333425-1333619:-1:exon

position:1333425:-1
position: 1333425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1333619:-1
position: 1333619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1332731-1332814:-1:exon

position:1332731:-1
position: 1332731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1332814:-1
position: 1332814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1332418-1332536:-1:exon

position:1332418:-1
position: 1332418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1332536:-1
position: 1332536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1329941-1330897:-1:exon

position:1330897:-1
position: 1330897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NUDC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NUDC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear migration protein nudC
translation: MGLSAEEAAEQEDRFDGMLLAMAQQHQGGVRELVNTFFSFLRRKTDFFTGGEDGIAEKLITETFNHHNKLAQKERKEKKARQEAERREKAERAAKLAKEKQEANEPRIKELTDEEAERLQLEIEQKKEVQGQVNNVPVKPSEDGGESPDSNKQETDDEEEDEKDKGKLKPNSGNGADLPNYRWTQTLSELDLAIPFKVNFRLKGKDLVVDIQRRRLRVGLKGHSPLIDGELFNEVKVEESSWLIEDGKTVTVHLEKINKMEWWNKLVSTDPEINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQDILKKFMEQHPEMDFSKAKFN
SIO_010081: NUDC
subclass of: SO_0000673
so part of: NUDC
location: complement(join(1330846..1330897,1332418..1332536,1332731..1332814,1333425..1333619,1334013..1334126,1334437..1334520,1335703..1335903,1338292..1338369,1339017..1339112))
location: region:1330846-1339112:-1
so has part: feature:1339017-1339112:-1:exon
so has part: feature:1338292-1338369:-1:exon
so has part: feature:1335703-1335903:-1:exon
so has part: feature:1334437-1334520:-1:exon
so has part: feature:1334013-1334126:-1:exon
so has part: feature:1333425-1333619:-1:exon
so has part: feature:1332731-1332814:-1:exon
so has part: feature:1332418-1332536:-1:exon
so has part: feature:1330846-1330897:-1:exon

XP_030320331.1
type: Protein
SIO_000068: ncbiprotein

position:1330846:-1
position: 1330846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1339112:-1
position: 1339112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1339017-1339112:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1338292-1338369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1335703-1335903:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1334437-1334520:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1334013-1334126:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1333425-1333619:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1332731-1332814:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1332418-1332536:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1330846-1330897:-1:exon

NR0B2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: NR0B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1340980..1343243
location: region:1340980-1343243:1
so has part: feature:1340980-1343243:1:exon
subclass of: SO_0000010

103535525
type: Gene
SIO_000068: ncbigene

position:1340980:1
position: 1340980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1343243:1
position: 1343243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1340980-1343243:1:exon

NR0B2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NR0B2
product: nuclear receptor subfamily 0 group B member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_008501587.2
SIO_010081: NR0B2
subclass of: SO_0000673
so part of: NR0B2
location: join(1340980..1341640,1342267..1343243)
location: region:1340980-1343243:1
so has part: feature:1340980-1341640:1:exon
so has part: feature:1342267-1343243:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1340980-1341640:1:exon

position:1341640:1
position: 1341640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1342267-1343243:1:exon

position:1342267:1
position: 1342267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NR0B2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NR0B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 0 group B member 2
translation: MEVECQRCRCHGEDKPSAILYTLLSQNLHQTPSPGHQRCLCPQPRTVCLRTPRLTCQEASSVLVKTLSFLQNLPSFHLLPREDQLLLLGSCWVPLFLLGLVQEMVTFEVMETPAPSMLKKILLDGQRKGQEPERTQPTLAAVQRLQCCLNTFWSLDLSPKEYAYLRGAILFNPDIPGLRASPYIQSLQREAQRALQEVLQPLHPEAQARFARILLISSTLQSIPPALITDLFFRPLIGNTDIVELMAEMLYQRSCGQLAPR
SIO_010081: NR0B2
subclass of: SO_0000673
so part of: NR0B2
location: join(1341121..1341640,1342267..1342532)
location: region:1341121-1342532:1
so has part: feature:1341121-1341640:1:exon
so has part: feature:1342267-1342532:1:exon

XP_008499809.1
type: Protein
SIO_000068: ncbiprotein

position:1341121:1
position: 1341121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1342532:1
position: 1342532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1341121-1341640:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1342267-1342532:1:exon

GPATCH3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: GPATCH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1344894..1350664
location: region:1344894-1350664:1
so has part: feature:1344894-1350664:1:exon
subclass of: SO_0000010

103535526
type: Gene
SIO_000068: ncbigene

position:1344894:1
position: 1344894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1350664:1
position: 1350664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1344894-1350664:1:exon

GPATCH3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: GPATCH3
product: G-patch domain containing 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030464392.1
SIO_010081: GPATCH3
subclass of: SO_0000673
so part of: GPATCH3
location: join(1344894..1345263,1345524..1345936,1347771..1347945,1348346..1348405,1348657..1348778,1348912..1349039,1350438..1350664)
location: region:1344894-1350664:1
so has part: feature:1344894-1345263:1:exon
so has part: feature:1345524-1345936:1:exon
so has part: feature:1347771-1347945:1:exon
so has part: feature:1348346-1348405:1:exon
so has part: feature:1348657-1348778:1:exon
so has part: feature:1348912-1349039:1:exon
so has part: feature:1350438-1350664:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1344894-1345263:1:exon

position:1345263:1
position: 1345263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1345524-1345936:1:exon

position:1345524:1
position: 1345524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1345936:1
position: 1345936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1347771-1347945:1:exon

position:1347771:1
position: 1347771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1347945:1
position: 1347945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1348346-1348405:1:exon

position:1348346:1
position: 1348346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1348405:1
position: 1348405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1348657-1348778:1:exon

position:1348657:1
position: 1348657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1348778:1
position: 1348778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1348912-1349039:1:exon

position:1348912:1
position: 1348912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1349039:1
position: 1349039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1350438-1350664:1:exon

position:1350438:1
position: 1350438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GPATCH3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: GPATCH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain-containing protein 3
translation: MAAPSGTPGNGGPAAARYCLVSGIPAALRSAQLRAYFSQFLEEGGFLCFHYRHRPERPPPPAEEEEAAASASAPRTCCCLVAVRPGRARRFLRMYSGKRWVGPGGSWLPGRCLIRRVRLGPGTGPETFPYSGDKVTSSDLVADFKGLPEFNPPSFMPYGNVGTPLKTFLELIRACRLPPWIIKKLQLDFPKTGSSRRYGNVPFEYQDTETVTEEEERVYTATGDEITAAEGAVAAAAQVTHPAGAEQDEEEQEEEEWHSEDDNDTCEEWERHEALHEDVTKQERVEERLFEEEIELKWEKGGSGLVFYTDAQYWQEQNGDFDEQTADDWDVDMSIYYDKDGGDKDARDSVRMCLEQRLRDGLEDGAVSGQQIGTFERHTKGFGRKVLEQQGWTEGLGLGSSNSGMAEALDNEGQNPRCKRGLGYHGEKLPTFKQVKKARRGDGPILISTIYDDPEPQDSGDQLLRRQPPTSMKYRKDMSFVRASRGVLQNFGIQ
SIO_010081: GPATCH3
subclass of: SO_0000673
so part of: GPATCH3
location: join(1344894..1345263,1345524..1345936,1347771..1347945,1348346..1348405,1348657..1348778,1348912..1349039,1350438..1350654)
location: region:1344894-1350654:1
so has part: feature:1344894-1345263:1:exon
so has part: feature:1345524-1345936:1:exon
so has part: feature:1347771-1347945:1:exon
so has part: feature:1348346-1348405:1:exon
so has part: feature:1348657-1348778:1:exon
so has part: feature:1348912-1349039:1:exon
so has part: feature:1350438-1350654:1:exon

XP_030320252.1
type: Protein
SIO_000068: ncbiprotein

position:1350654:1
position: 1350654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1344894-1345263:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1345524-1345936:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1347771-1347945:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1348346-1348405:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1348657-1348778:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1348912-1349039:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1350438-1350654:1:exon

GPN2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: GPN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1350814..1357993
location: region:1350814-1357993:1
so has part: feature:1350814-1357993:1:exon
subclass of: SO_0000010

103535486
type: Gene
SIO_000068: ncbigene

position:1350814:1
position: 1350814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1357993:1
position: 1357993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1350814-1357993:1:exon

GPN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: GPN2
product: GPN-loop GTPase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 1 long SRA read, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_008501543.2
SIO_010081: GPN2
subclass of: SO_0000673
so part of: GPN2
location: join(1350814..1350895,1351904..1352345,1355719..1355875,1355963..1356123,1356834..1356964,1357389..1357993)
location: region:1350814-1357993:1
so has part: feature:1350814-1350895:1:exon
so has part: feature:1351904-1352345:1:exon
so has part: feature:1355719-1355875:1:exon
so has part: feature:1355963-1356123:1:exon
so has part: feature:1356834-1356964:1:exon
so has part: feature:1357389-1357993:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1350814-1350895:1:exon

position:1350895:1
position: 1350895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1351904-1352345:1:exon

position:1351904:1
position: 1351904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1352345:1
position: 1352345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1355719-1355875:1:exon

position:1355719:1
position: 1355719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1355875:1
position: 1355875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1355963-1356123:1:exon

position:1355963:1
position: 1355963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1356123:1
position: 1356123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1356834-1356964:1:exon

position:1356834:1
position: 1356834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1356964:1
position: 1356964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1357389-1357993:1:exon

position:1357389:1
position: 1357389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GPN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: GPN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GPN-loop GTPase 2
translation: MSEGCQGSSLAFGQVVIGPPGSGKTTYCLGMQEFLGRIGRKVTVVNLDPANEVVPYPCSLDISELITLPDVMENLKLGPNGGLLYCMEYLEANSDWLHQKLAASKGHYYLFDCPGQVELYTHHNALKNVFSQLAKWNFRLAAVHLVDSHYCTDPGKFISVLCTSLSTMLHVELPHVNVLSKMDLLEQYGKLAFNLDYYTEVLDLSYLVEHLASDPFFRNYRRLNEKLVEVIEDYSLVSFVPLNVQDKESMRQVMQAVDKANGYSFGDQEHRSLEALMSAAVGADFHFTSTLAVQERYVQSQDKTVEEEAMEL
SIO_010081: GPN2
subclass of: SO_0000673
so part of: GPN2
location: join(1351929..1352345,1355719..1355875,1355963..1356123,1356834..1356964,1357389..1357461)
location: region:1351929-1357461:1
so has part: feature:1351929-1352345:1:exon
so has part: feature:1355719-1355875:1:exon
so has part: feature:1355963-1356123:1:exon
so has part: feature:1356834-1356964:1:exon
so has part: feature:1357389-1357461:1:exon

XP_008499765.1
type: Protein
SIO_000068: ncbiprotein

position:1351929:1
position: 1351929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1357461:1
position: 1357461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1351929-1352345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1355719-1355875:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1355963-1356123:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1356834-1356964:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1357389-1357461:1:exon

SFN
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SFN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1362710..1367925)
location: region:1362710-1367925:-1
so has part: feature:1362710-1367925:-1:exon
subclass of: SO_0000010

103535487
type: Gene
SIO_000068: ncbigene

position:1362710:-1
position: 1362710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1367925:-1
position: 1367925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1362710-1367925:-1:exon

SFN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SFN
product: stratifin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008501544.2
SIO_010081: SFN
subclass of: SO_0000673
so part of: SFN
location: complement(join(1362710..1363491,1367899..1367925))
location: region:1362710-1367925:-1
so has part: feature:1367899-1367925:-1:exon
so has part: feature:1362710-1363491:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1367899-1367925:-1:exon

position:1367899:-1
position: 1367899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1362710-1363491:-1:exon

position:1363491:-1
position: 1363491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SFN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SFN
product: stratifin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 46 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008501545.2
SIO_010081: SFN
subclass of: SO_0000673
so part of: SFN
location: complement(1362710..1363644)
location: region:1362710-1363644:-1
so has part: feature:1362710-1363644:-1:exon

position:1363644:-1
position: 1363644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1362710-1363644:-1:exon

SFN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SFN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 14-3-3 protein sigma isoform X1
translation: MEERDSLSFKAKLAEQAERYEDMADFMKAVVEHGDELSNEERNLLSVAYKNVVGCQRSAWRVISSIEHKTEEGDDKAQLVNEYREKVERELNGVCKNVLNLLDKYLIKKATDAESKVFYLKMKGDYFRYLAEVAIGDNRKTAIDNAQQAYQEAMDISKKEMQPTNPIRLGLALNFSVFHYEIANAPEQAISLAKTTFDEAMGDLHTLSEDSYKDSTLIMQLLRDNLTLWTAECAGEDGGEAGEEPKN
SIO_010081: SFN
subclass of: SO_0000673
so part of: SFN
location: complement(join(1362775..1363491,1367899..1367925))
location: region:1362775-1367925:-1
so has part: feature:1367899-1367925:-1:exon
so has part: feature:1362775-1363491:-1:exon

XP_008499766.1
type: Protein
SIO_000068: ncbiprotein

position:1362775:-1
position: 1362775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1367899-1367925:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1362775-1363491:-1:exon

SFN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SFN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 14-3-3 protein sigma isoform X2
translation: MARNHQVQKAKLAEQAERYEDMADFMKAVVEHGDELSNEERNLLSVAYKNVVGCQRSAWRVISSIEHKTEEGDDKAQLVNEYREKVERELNGVCKNVLNLLDKYLIKKATDAESKVFYLKMKGDYFRYLAEVAIGDNRKTAIDNAQQAYQEAMDISKKEMQPTNPIRLGLALNFSVFHYEIANAPEQAISLAKTTFDEAMGDLHTLSEDSYKDSTLIMQLLRDNLTLWTAECAGEDGGEAGEEPKN
SIO_010081: SFN
subclass of: SO_0000673
so part of: SFN
location: complement(1362775..1363515)
location: region:1362775-1363515:-1
so has part: feature:1362775-1363515:-1:exon

XP_008499767.1
type: Protein
SIO_000068: ncbiprotein

position:1363515:-1
position: 1363515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1362775-1363515:-1:exon

ZDHHC18
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ZDHHC18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1366371..1380777)
location: region:1366371-1380777:-1
so has part: feature:1366371-1380777:-1:exon
subclass of: SO_0000010

103535527
type: Gene
SIO_000068: ncbigene

position:1366371:-1
position: 1366371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1380777:-1
position: 1380777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1366371-1380777:-1:exon

ZDHHC18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ZDHHC18
product: zinc finger DHHC-type containing 18, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030464466.1
SIO_010081: ZDHHC18
subclass of: SO_0000673
so part of: ZDHHC18
location: complement(join(1366371..1367152,1368058..1368150,1370481..1370580,1371535..1371644,1373133..1373235,1373690..1373738,1374197..1374334,1375637..1375786,1377729..1377889,1380474..1380777))
location: region:1366371-1380777:-1
so has part: feature:1380474-1380777:-1:exon
so has part: feature:1377729-1377889:-1:exon
so has part: feature:1375637-1375786:-1:exon
so has part: feature:1374197-1374334:-1:exon
so has part: feature:1373690-1373738:-1:exon
so has part: feature:1373133-1373235:-1:exon
so has part: feature:1371535-1371644:-1:exon
so has part: feature:1370481-1370580:-1:exon
so has part: feature:1368058-1368150:-1:exon
so has part: feature:1366371-1367152:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1380474-1380777:-1:exon

position:1380474:-1
position: 1380474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1377729-1377889:-1:exon

position:1377729:-1
position: 1377729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1377889:-1
position: 1377889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1375637-1375786:-1:exon

position:1375637:-1
position: 1375637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1375786:-1
position: 1375786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1374197-1374334:-1:exon

position:1374197:-1
position: 1374197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1374334:-1
position: 1374334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1373690-1373738:-1:exon

position:1373690:-1
position: 1373690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1373738:-1
position: 1373738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1373133-1373235:-1:exon

position:1373133:-1
position: 1373133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1373235:-1
position: 1373235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1371535-1371644:-1:exon

position:1371535:-1
position: 1371535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1371644:-1
position: 1371644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1370481-1370580:-1:exon

position:1370481:-1
position: 1370481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1370580:-1
position: 1370580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1368058-1368150:-1:exon

position:1368058:-1
position: 1368058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1368150:-1
position: 1368150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1366371-1367152:-1:exon

position:1367152:-1
position: 1367152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZDHHC18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ZDHHC18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC18 isoform X2
translation: MKDCEYRQIPPGLTGQATGTGISSPPLTAGTERSAETRRPRRKWEVFPGRNRFYCGGRLMLARHSGVFALTLVLILATSGLFFAFDCPFLASHLTLAIPIIAAILFFFVISCLLQTSFRDPGILPRATPSEAADLEKQIDNMGNSSYRPPARTMEVVINKYVVKLKYCYTCKMFRPPRTSHCSVCDNCVERFDHHCPWVGNCVGKRNYRYFYAFILSLSFLTAFIFACVVTHLTLRSQRDGFLNTLKMTPASVLELVICFFSVWSILGLSGFHTYLVASNLTTNEDIKGSWSNKRGSEFANPYSHKSILTNCCAVLCGPFHPSLIDRRGFIQPDVGTPSSPKSEIPSFGAKTDTSMEDACQDFAISCAA
SIO_010081: ZDHHC18
subclass of: SO_0000673
so part of: ZDHHC18
location: complement(join(1368109..1368150,1370481..1370580,1371535..1371644,1373133..1373235,1373690..1373738,1374197..1374334,1375637..1375786,1377729..1377889,1380474..1380730))
location: region:1368109-1380730:-1
so has part: feature:1380474-1380730:-1:exon
so has part: feature:1377729-1377889:-1:exon
so has part: feature:1375637-1375786:-1:exon
so has part: feature:1374197-1374334:-1:exon
so has part: feature:1373690-1373738:-1:exon
so has part: feature:1373133-1373235:-1:exon
so has part: feature:1371535-1371644:-1:exon
so has part: feature:1370481-1370580:-1:exon
so has part: feature:1368109-1368150:-1:exon

XP_030320326.1
type: Protein
SIO_000068: ncbiprotein

position:1368109:-1
position: 1368109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1380730:-1
position: 1380730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1380474-1380730:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1377729-1377889:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1375637-1375786:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1374197-1374334:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1373690-1373738:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1373133-1373235:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1371535-1371644:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1370481-1370580:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1368109-1368150:-1:exon

ZDHHC18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ZDHHC18
product: zinc finger DHHC-type containing 18, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464468.1
SIO_010081: ZDHHC18
subclass of: SO_0000673
so part of: ZDHHC18
location: complement(join(1368487..1370221,1370481..1370580,1371535..1371644,1373133..1373235,1373690..1373738,1374197..1374334,1375637..1375786,1377729..1377814,1380474..1380777))
location: region:1368487-1380777:-1
so has part: feature:1380474-1380777:-1:exon
so has part: feature:1377729-1377814:-1:exon
so has part: feature:1375637-1375786:-1:exon
so has part: feature:1374197-1374334:-1:exon
so has part: feature:1373690-1373738:-1:exon
so has part: feature:1373133-1373235:-1:exon
so has part: feature:1371535-1371644:-1:exon
so has part: feature:1370481-1370580:-1:exon
so has part: feature:1368487-1370221:-1:exon

position:1368487:-1
position: 1368487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1380474-1380777:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1377729-1377814:-1:exon

position:1377814:-1
position: 1377814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1375637-1375786:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1374197-1374334:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1373690-1373738:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1373133-1373235:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1371535-1371644:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1370481-1370580:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1368487-1370221:-1:exon

position:1370221:-1
position: 1370221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZDHHC18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ZDHHC18
product: zinc finger DHHC-type containing 18, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030464465.1
SIO_010081: ZDHHC18
subclass of: SO_0000673
so part of: ZDHHC18
location: complement(join(1368487..1370221,1370481..1370580,1371535..1371644,1373133..1373235,1373690..1373738,1374197..1374334,1375637..1375786,1377729..1377889,1380474..1380777))
location: region:1368487-1380777:-1
so has part: feature:1380474-1380777:-1:exon
so has part: feature:1377729-1377889:-1:exon
so has part: feature:1375637-1375786:-1:exon
so has part: feature:1374197-1374334:-1:exon
so has part: feature:1373690-1373738:-1:exon
so has part: feature:1373133-1373235:-1:exon
so has part: feature:1371535-1371644:-1:exon
so has part: feature:1370481-1370580:-1:exon
so has part: feature:1368487-1370221:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1380474-1380777:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1377729-1377889:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1375637-1375786:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1374197-1374334:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1373690-1373738:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1373133-1373235:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1371535-1371644:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1370481-1370580:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1368487-1370221:-1:exon

ZDHHC18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ZDHHC18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC18 isoform X4
translation: MKDCEYRQIPPGLTGQATGTGISSPPLTAGTERSAETRRPRRKWEVFPGRNRFYCGGRLMLARHSGVFALTLVLILATSGLFFAFDCLLQTSFRDPGILPRATPSEAADLEKQIDNMGNSSYRPPARTMEVVINKYVVKLKYCYTCKMFRPPRTSHCSVCDNCVERFDHHCPWVGNCVGKRNYRYFYAFILSLSFLTAFIFACVVTHLTLRSQRDGFLNTLKMTPASVLELVICFFSVWSILGLSGFHTYLVASNLTTNEDIKGSWSNKRGSEFANPYSHKSILTNCCAVLCGPFHPSLIDRRGFIQPDVGTPSSPKSEIPSFGAKTDTSMSPTACKTLRLVQKAGGALLDPGSR
SIO_010081: ZDHHC18
subclass of: SO_0000673
so part of: ZDHHC18
location: complement(join(1370147..1370221,1370481..1370580,1371535..1371644,1373133..1373235,1373690..1373738,1374197..1374334,1375637..1375786,1377729..1377814,1380474..1380730))
location: region:1370147-1380730:-1
so has part: feature:1380474-1380730:-1:exon
so has part: feature:1377729-1377814:-1:exon
so has part: feature:1375637-1375786:-1:exon
so has part: feature:1374197-1374334:-1:exon
so has part: feature:1373690-1373738:-1:exon
so has part: feature:1373133-1373235:-1:exon
so has part: feature:1371535-1371644:-1:exon
so has part: feature:1370481-1370580:-1:exon
so has part: feature:1370147-1370221:-1:exon

XP_030320328.1
type: Protein
SIO_000068: ncbiprotein

position:1370147:-1
position: 1370147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1380474-1380730:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1377729-1377814:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1375637-1375786:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1374197-1374334:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1373690-1373738:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1373133-1373235:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1371535-1371644:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1370481-1370580:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1370147-1370221:-1:exon

ZDHHC18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ZDHHC18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC18 isoform X1
translation: MKDCEYRQIPPGLTGQATGTGISSPPLTAGTERSAETRRPRRKWEVFPGRNRFYCGGRLMLARHSGVFALTLVLILATSGLFFAFDCPFLASHLTLAIPIIAAILFFFVISCLLQTSFRDPGILPRATPSEAADLEKQIDNMGNSSYRPPARTMEVVINKYVVKLKYCYTCKMFRPPRTSHCSVCDNCVERFDHHCPWVGNCVGKRNYRYFYAFILSLSFLTAFIFACVVTHLTLRSQRDGFLNTLKMTPASVLELVICFFSVWSILGLSGFHTYLVASNLTTNEDIKGSWSNKRGSEFANPYSHKSILTNCCAVLCGPFHPSLIDRRGFIQPDVGTPSSPKSEIPSFGAKTDTSMSPTACKTLRLVQKAGGALLDPGSR
SIO_010081: ZDHHC18
subclass of: SO_0000673
so part of: ZDHHC18
location: complement(join(1370147..1370221,1370481..1370580,1371535..1371644,1373133..1373235,1373690..1373738,1374197..1374334,1375637..1375786,1377729..1377889,1380474..1380730))
location: region:1370147-1380730:-1
so has part: feature:1380474-1380730:-1:exon
so has part: feature:1377729-1377889:-1:exon
so has part: feature:1375637-1375786:-1:exon
so has part: feature:1374197-1374334:-1:exon
so has part: feature:1373690-1373738:-1:exon
so has part: feature:1373133-1373235:-1:exon
so has part: feature:1371535-1371644:-1:exon
so has part: feature:1370481-1370580:-1:exon
so has part: feature:1370147-1370221:-1:exon

XP_030320325.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1380474-1380730:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1377729-1377889:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1375637-1375786:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1374197-1374334:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1373690-1373738:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1373133-1373235:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1371535-1371644:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1370481-1370580:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1370147-1370221:-1:exon

ZDHHC18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ZDHHC18
product: zinc finger DHHC-type containing 18, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs, 17 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_008501590.2
SIO_010081: ZDHHC18
subclass of: SO_0000673
so part of: ZDHHC18
location: complement(join(1370254..1370580,1371535..1371644,1373133..1373235,1373690..1373738,1374197..1374334,1375637..1375786,1377729..1377889,1380474..1380777))
location: region:1370254-1380777:-1
so has part: feature:1380474-1380777:-1:exon
so has part: feature:1377729-1377889:-1:exon
so has part: feature:1375637-1375786:-1:exon
so has part: feature:1374197-1374334:-1:exon
so has part: feature:1373690-1373738:-1:exon
so has part: feature:1373133-1373235:-1:exon
so has part: feature:1371535-1371644:-1:exon
so has part: feature:1370254-1370580:-1:exon

position:1370254:-1
position: 1370254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1380474-1380777:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1377729-1377889:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1375637-1375786:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1374197-1374334:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1373690-1373738:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1373133-1373235:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1371535-1371644:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1370254-1370580:-1:exon

ZDHHC18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ZDHHC18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC18 isoform X3
translation: MKDCEYRQIPPGLTGQATGTGISSPPLTAGTERSAETRRPRRKWEVFPGRNRFYCGGRLMLARHSGVFALTLVLILATSGLFFAFDCPFLASHLTLAIPIIAAILFFFVISCLLQTSFRDPGILPRATPSEAADLEKQIDNMGNSSYRPPARTMEVVINKYVVKLKYCYTCKMFRPPRTSHCSVCDNCVERFDHHCPWVGNCVGKRNYRYFYAFILSLSFLTAFIFACVVTHLTLRSQRDGFLNTLKMTPASVLELVICFFSVWSILGLSGFHTYLVASNLTTNEDIKGSWSNKRGSEFANPYSHKSILTNCCAVLCGPFHPSLIDRRGFIQPDVGTPSSPKSEIPSFGAKTDTSMVGGIP
SIO_010081: ZDHHC18
subclass of: SO_0000673
so part of: ZDHHC18
location: complement(join(1370463..1370580,1371535..1371644,1373133..1373235,1373690..1373738,1374197..1374334,1375637..1375786,1377729..1377889,1380474..1380730))
location: region:1370463-1380730:-1
so has part: feature:1380474-1380730:-1:exon
so has part: feature:1377729-1377889:-1:exon
so has part: feature:1375637-1375786:-1:exon
so has part: feature:1374197-1374334:-1:exon
so has part: feature:1373690-1373738:-1:exon
so has part: feature:1373133-1373235:-1:exon
so has part: feature:1371535-1371644:-1:exon
so has part: feature:1370463-1370580:-1:exon

XP_008499812.2
type: Protein
SIO_000068: ncbiprotein

position:1370463:-1
position: 1370463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1380474-1380730:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1377729-1377889:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1375637-1375786:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1374197-1374334:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1373690-1373738:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1373133-1373235:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1371535-1371644:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1370463-1370580:-1:exon

PIGV
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PIGV
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1381103..1389689)
location: region:1381103-1389689:-1
so has part: feature:1381103-1389689:-1:exon
subclass of: SO_0000010

103535488
type: Gene
SIO_000068: ncbigene

position:1381103:-1
position: 1381103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1389689:-1
position: 1389689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1381103-1389689:-1:exon

PIGV
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PIGV
product: phosphatidylinositol glycan anchor biosynthesis class V, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464555.1
SIO_010081: PIGV
subclass of: SO_0000673
so part of: PIGV
location: complement(join(1381103..1381452,1382482..1383633,1384872..1385030,1389559..1389689))
location: region:1381103-1389689:-1
so has part: feature:1389559-1389689:-1:exon
so has part: feature:1384872-1385030:-1:exon
so has part: feature:1382482-1383633:-1:exon
so has part: feature:1381103-1381452:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1389559-1389689:-1:exon

position:1389559:-1
position: 1389559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1384872-1385030:-1:exon

position:1384872:-1
position: 1384872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1385030:-1
position: 1385030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1382482-1383633:-1:exon

position:1382482:-1
position: 1382482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1383633:-1
position: 1383633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1381103-1381452:-1:exon

position:1381452:-1
position: 1381452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PIGV
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PIGV
product: phosphatidylinositol glycan anchor biosynthesis class V, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030464556.1
SIO_010081: PIGV
subclass of: SO_0000673
so part of: PIGV
location: complement(join(1381103..1381452,1382482..1382916,1383031..1383633,1384872..1385030,1388387..1388453))
location: region:1381103-1388453:-1
so has part: feature:1388387-1388453:-1:exon
so has part: feature:1384872-1385030:-1:exon
so has part: feature:1383031-1383633:-1:exon
so has part: feature:1382482-1382916:-1:exon
so has part: feature:1381103-1381452:-1:exon

position:1388453:-1
position: 1388453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1388387-1388453:-1:exon

position:1388387:-1
position: 1388387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1384872-1385030:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1383031-1383633:-1:exon

position:1383031:-1
position: 1383031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1382482-1382916:-1:exon

position:1382916:-1
position: 1382916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1381103-1381452:-1:exon

PIGV
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PIGV
product: phosphatidylinositol glycan anchor biosynthesis class V, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_030464554.1
SIO_010081: PIGV
subclass of: SO_0000673
so part of: PIGV
location: complement(join(1381103..1381452,1382482..1383633,1384872..1385030,1388387..1388453))
location: region:1381103-1388453:-1
so has part: feature:1388387-1388453:-1:exon
so has part: feature:1384872-1385030:-1:exon
so has part: feature:1382482-1383633:-1:exon
so has part: feature:1381103-1381452:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1388387-1388453:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1384872-1385030:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1382482-1383633:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1381103-1381452:-1:exon

PIGV
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PIGV
product: phosphatidylinositol glycan anchor biosynthesis class V, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030464558.1
SIO_010081: PIGV
subclass of: SO_0000673
so part of: PIGV
location: complement(join(1381103..1381452,1382482..1383317,1383473..1383633,1384872..1384955))
location: region:1381103-1384955:-1
so has part: feature:1384872-1384955:-1:exon
so has part: feature:1383473-1383633:-1:exon
so has part: feature:1382482-1383317:-1:exon
so has part: feature:1381103-1381452:-1:exon

position:1384955:-1
position: 1384955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1384872-1384955:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1383473-1383633:-1:exon

position:1383473:-1
position: 1383473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1382482-1383317:-1:exon

position:1383317:-1
position: 1383317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1381103-1381452:-1:exon

PIGV
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PIGV
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GPI mannosyltransferase 2 isoform X2
translation: MELGSRQDPQLREVVRFAVCCRALTLLLQALFNFLIPDHAADAFSPPRLSDPGPWDLLVEQLLGGLSHWDAEHFLFIAERGYLYEHNCAFFPLYPLCLRAVAEAAPGPLRQLLRLRSRLLLSVVLLNSLFSILAAAALFKLGCSVLRCRGTAFLAALLFSISPANVFMAAAYSESVFAVLSFSAMWQLEQGWGSLSGVLFSLASGARANGVLNAGFFLYSRGRRFALQLQYYAYMKFCGPSPERDVPEPLLQLALDKGYRLAATEGVQPPWCSQRLPVVYSYIQDVYWNVGFLRYFELRQIPNFLLASPVTLLGLWAAWTYVTSNPRHCLTLGLERRKAEGEDKPRAGFCSPAVFVYVVHATVLLVFGFFCMHVQVLTRFLCSSSPVLYWFCAHLLQEHEPLLWNEGTSDQTVTPLTGNAPGPGGESSCGNPLLVLLRGRGSIAPLSRGLLGFFLTYCLLGLALHCNSLPWT
SIO_010081: PIGV
subclass of: SO_0000673
so part of: PIGV
location: complement(join(1381159..1381452,1382482..1382916,1383031..1383633,1384872..1384958))
location: region:1381159-1384958:-1
so has part: feature:1384872-1384958:-1:exon
so has part: feature:1383031-1383633:-1:exon
so has part: feature:1382482-1382916:-1:exon
so has part: feature:1381159-1381452:-1:exon

XP_030320416.1
type: Protein
SIO_000068: ncbiprotein

position:1381159:-1
position: 1381159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1384958:-1
position: 1384958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1384872-1384958:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1383031-1383633:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1382482-1382916:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1381159-1381452:-1:exon

PIGV
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PIGV
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GPI mannosyltransferase 2 isoform X1
translation: MELGSRQDPQLREVVRFAVCCRALTLLLQALFNFLIPDHAADAFSPPRLSDPGPWDLLVEQLLGGLSHWDAEHFLFIAERGYLYEHNCAFFPLYPLCLRAVAEAAPGPLRQLLRLRSRLLLSVVLLNSLFSILAAAALFKLGCSVLRCRGTAFLAALLFSISPANVFMAAAYSESVFAVLSFSAMWQLEQGWGSLSGVLFSLASGARANGVLNAGFFLYSRGRRFALQLQVGSGAPRTFPPLWKRLLSLVSSSLLLCAAVFLPFALFQYYAYMKFCGPSPERDVPEPLLQLALDKGYRLAATEGVQPPWCSQRLPVVYSYIQDVYWNVGFLRYFELRQIPNFLLASPVTLLGLWAAWTYVTSNPRHCLTLGLERRKAEGEDKPRAGFCSPAVFVYVVHATVLLVFGFFCMHVQVLTRFLCSSSPVLYWFCAHLLQEHEPLLWNEGTSDQTVTPLTGNAPGPGGESSCGNPLLVLLRGRGSIAPLSRGLLGFFLTYCLLGLALHCNSLPWT
SIO_010081: PIGV
subclass of: SO_0000673
so part of: PIGV
location: complement(join(1381159..1381452,1382482..1383633,1384872..1384958))
location: region:1381159-1384958:-1
so has part: feature:1384872-1384958:-1:exon
so has part: feature:1382482-1383633:-1:exon
so has part: feature:1381159-1381452:-1:exon

XP_030320414.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1384872-1384958:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1382482-1383633:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1381159-1381452:-1:exon

PIGV
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PIGV
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GPI mannosyltransferase 2 isoform X1
translation: MELGSRQDPQLREVVRFAVCCRALTLLLQALFNFLIPDHAADAFSPPRLSDPGPWDLLVEQLLGGLSHWDAEHFLFIAERGYLYEHNCAFFPLYPLCLRAVAEAAPGPLRQLLRLRSRLLLSVVLLNSLFSILAAAALFKLGCSVLRCRGTAFLAALLFSISPANVFMAAAYSESVFAVLSFSAMWQLEQGWGSLSGVLFSLASGARANGVLNAGFFLYSRGRRFALQLQVGSGAPRTFPPLWKRLLSLVSSSLLLCAAVFLPFALFQYYAYMKFCGPSPERDVPEPLLQLALDKGYRLAATEGVQPPWCSQRLPVVYSYIQDVYWNVGFLRYFELRQIPNFLLASPVTLLGLWAAWTYVTSNPRHCLTLGLERRKAEGEDKPRAGFCSPAVFVYVVHATVLLVFGFFCMHVQVLTRFLCSSSPVLYWFCAHLLQEHEPLLWNEGTSDQTVTPLTGNAPGPGGESSCGNPLLVLLRGRGSIAPLSRGLLGFFLTYCLLGLALHCNSLPWT
SIO_010081: PIGV
subclass of: SO_0000673
so part of: PIGV
location: complement(join(1381159..1381452,1382482..1383633,1384872..1384958))
location: region:1381159-1384958:-1
so has part: feature:1384872-1384958:-1:exon
so has part: feature:1382482-1383633:-1:exon
so has part: feature:1381159-1381452:-1:exon

XP_030320415.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1384872-1384958:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1382482-1383633:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1381159-1381452:-1:exon

PIGV
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PIGV
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GPI mannosyltransferase 2 isoform X3
translation: MLQTPSPPLACQILAPGTCWWSSCWAGSPTGMLSTSSSSLSGVTSAALFKLGCSVLRCRGTAFLAALLFSISPANVFMAAAYSESVFAVLSFSAMWQLEQGWGSLSGVLFSLASGARANGVLNAGFFLYSRGRRFALQLQVGSGAPRTFPPLWKRLLSLVSSSLLLCAAVFLPFALFQYYAYMKFCGPSPERDVPEPLLQLALDKGYRLAATEGVQPPWCSQRLPVVYSYIQDVYWNVGFLRYFELRQIPNFLLASPVTLLGLWAAWTYVTSNPRHCLTLGLERRKAEGEDKPRAGFCSPAVFVYVVHATVLLVFGFFCMHVQVLTRFLCSSSPVLYWFCAHLLQEHEPLLWNEGTSDQTVTPLTGNAPGPGGESSCGNPLLVLLRGRGSIAPLSRGLLGFFLTYCLLGLALHCNSLPWT
SIO_010081: PIGV
subclass of: SO_0000673
so part of: PIGV
location: complement(join(1381159..1381452,1382482..1383317,1383473..1383605))
location: region:1381159-1383605:-1
so has part: feature:1383473-1383605:-1:exon
so has part: feature:1382482-1383317:-1:exon
so has part: feature:1381159-1381452:-1:exon

XP_030320418.1
type: Protein
SIO_000068: ncbiprotein

position:1383605:-1
position: 1383605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1383473-1383605:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1382482-1383317:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1381159-1381452:-1:exon

ARID1A
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ARID1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1391912..1453515)
location: region:1391912-1453515:-1
so has part: feature:1391912-1453515:-1:exon
subclass of: SO_0000010

103535528
type: Gene
SIO_000068: ncbigene

position:1391912:-1
position: 1391912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1453515:-1
position: 1453515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1391912-1453515:-1:exon

ARID1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ARID1A
product: AT-rich interaction domain 1A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 ESTs, 5 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464598.1
SIO_010081: ARID1A
subclass of: SO_0000673
so part of: ARID1A
location: complement(join(1391912..1394166,1395024..1395154,1395456..1396329,1398064..1398160,1398272..1398403,1398562..1398712,1398910..1399082,1399407..1399539,1403299..1403506,1404036..1404245,1406454..1406563,1406651..1406796,1408032..1408347,1408921..1409088,1409789..1409878,1410198..1410438,1426422..1426535,1427425..1427895,1428592..1428804,1452855..1453001,1453437..1453515))
location: region:1391912-1453515:-1
so has part: feature:1453437-1453515:-1:exon
so has part: feature:1452855-1453001:-1:exon
so has part: feature:1428592-1428804:-1:exon
so has part: feature:1427425-1427895:-1:exon
so has part: feature:1426422-1426535:-1:exon
so has part: feature:1410198-1410438:-1:exon
so has part: feature:1409789-1409878:-1:exon
so has part: feature:1408921-1409088:-1:exon
so has part: feature:1408032-1408347:-1:exon
so has part: feature:1406651-1406796:-1:exon
so has part: feature:1406454-1406563:-1:exon
so has part: feature:1404036-1404245:-1:exon
so has part: feature:1403299-1403506:-1:exon
so has part: feature:1399407-1399539:-1:exon
so has part: feature:1398910-1399082:-1:exon
so has part: feature:1398562-1398712:-1:exon
so has part: feature:1398272-1398403:-1:exon
so has part: feature:1398064-1398160:-1:exon
so has part: feature:1395456-1396329:-1:exon
so has part: feature:1395024-1395154:-1:exon
so has part: feature:1391912-1394166:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1453437-1453515:-1:exon

position:1453437:-1
position: 1453437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1452855-1453001:-1:exon

position:1452855:-1
position: 1452855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1453001:-1
position: 1453001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1428592-1428804:-1:exon

position:1428592:-1
position: 1428592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1428804:-1
position: 1428804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1427425-1427895:-1:exon

position:1427425:-1
position: 1427425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1427895:-1
position: 1427895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1426422-1426535:-1:exon

position:1426422:-1
position: 1426422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1426535:-1
position: 1426535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1410198-1410438:-1:exon

position:1410198:-1
position: 1410198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1410438:-1
position: 1410438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1409789-1409878:-1:exon

position:1409789:-1
position: 1409789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1409878:-1
position: 1409878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1408921-1409088:-1:exon

position:1408921:-1
position: 1408921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1409088:-1
position: 1409088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1408032-1408347:-1:exon

position:1408032:-1
position: 1408032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1408347:-1
position: 1408347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1406651-1406796:-1:exon

position:1406651:-1
position: 1406651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1406796:-1
position: 1406796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1406454-1406563:-1:exon

position:1406454:-1
position: 1406454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1406563:-1
position: 1406563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1404036-1404245:-1:exon

position:1404036:-1
position: 1404036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1404245:-1
position: 1404245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1403299-1403506:-1:exon

position:1403299:-1
position: 1403299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1403506:-1
position: 1403506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1399407-1399539:-1:exon

position:1399407:-1
position: 1399407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1399539:-1
position: 1399539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1398910-1399082:-1:exon

position:1398910:-1
position: 1398910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1399082:-1
position: 1399082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1398562-1398712:-1:exon

position:1398562:-1
position: 1398562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1398712:-1
position: 1398712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1398272-1398403:-1:exon

position:1398272:-1
position: 1398272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1398403:-1
position: 1398403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1398064-1398160:-1:exon

position:1398064:-1
position: 1398064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1398160:-1
position: 1398160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1395456-1396329:-1:exon

position:1395456:-1
position: 1395456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1396329:-1
position: 1396329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1395024-1395154:-1:exon

position:1395024:-1
position: 1395024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1395154:-1
position: 1395154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1391912-1394166:-1:exon

position:1394166:-1
position: 1394166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARID1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ARID1A
product: AT-rich interaction domain 1A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 ESTs, 6 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030464594.1
SIO_010081: ARID1A
subclass of: SO_0000673
so part of: ARID1A
location: complement(join(1391912..1394166,1395024..1395154,1395456..1396329,1398064..1398160,1398272..1398403,1398562..1398712,1398910..1399082,1399407..1399539,1403299..1403506,1404036..1404245,1406454..1406563,1406651..1406796,1408032..1408347,1408921..1409088,1409789..1409878,1410198..1410438,1426422..1426535,1427425..1427895,1428592..1428804,1450926..1452094))
location: region:1391912-1452094:-1
so has part: feature:1450926-1452094:-1:exon
so has part: feature:1428592-1428804:-1:exon
so has part: feature:1427425-1427895:-1:exon
so has part: feature:1426422-1426535:-1:exon
so has part: feature:1410198-1410438:-1:exon
so has part: feature:1409789-1409878:-1:exon
so has part: feature:1408921-1409088:-1:exon
so has part: feature:1408032-1408347:-1:exon
so has part: feature:1406651-1406796:-1:exon
so has part: feature:1406454-1406563:-1:exon
so has part: feature:1404036-1404245:-1:exon
so has part: feature:1403299-1403506:-1:exon
so has part: feature:1399407-1399539:-1:exon
so has part: feature:1398910-1399082:-1:exon
so has part: feature:1398562-1398712:-1:exon
so has part: feature:1398272-1398403:-1:exon
so has part: feature:1398064-1398160:-1:exon
so has part: feature:1395456-1396329:-1:exon
so has part: feature:1395024-1395154:-1:exon
so has part: feature:1391912-1394166:-1:exon

position:1452094:-1
position: 1452094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1450926-1452094:-1:exon

position:1450926:-1
position: 1450926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1428592-1428804:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1427425-1427895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1426422-1426535:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1410198-1410438:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1409789-1409878:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1408921-1409088:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1408032-1408347:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1406651-1406796:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1406454-1406563:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1404036-1404245:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1403299-1403506:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1399407-1399539:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1398910-1399082:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1398562-1398712:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1398272-1398403:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1398064-1398160:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1395456-1396329:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1395024-1395154:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1391912-1394166:-1:exon

ARID1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ARID1A
product: AT-rich interaction domain 1A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030464597.1
SIO_010081: ARID1A
subclass of: SO_0000673
so part of: ARID1A
location: complement(join(1392439..1394166,1395024..1395154,1395456..1396329,1398064..1398160,1398272..1398403,1398562..1398712,1398910..1399082,1399407..1399539,1403299..1403506,1404036..1404245,1406454..1406563,1406651..1406796,1408032..1408347,1408921..1409088,1410198..1410438,1426422..1426535,1427425..1427895,1428592..1428804,1450926..1452096))
location: region:1392439-1452096:-1
so has part: feature:1450926-1452096:-1:exon
so has part: feature:1428592-1428804:-1:exon
so has part: feature:1427425-1427895:-1:exon
so has part: feature:1426422-1426535:-1:exon
so has part: feature:1410198-1410438:-1:exon
so has part: feature:1408921-1409088:-1:exon
so has part: feature:1408032-1408347:-1:exon
so has part: feature:1406651-1406796:-1:exon
so has part: feature:1406454-1406563:-1:exon
so has part: feature:1404036-1404245:-1:exon
so has part: feature:1403299-1403506:-1:exon
so has part: feature:1399407-1399539:-1:exon
so has part: feature:1398910-1399082:-1:exon
so has part: feature:1398562-1398712:-1:exon
so has part: feature:1398272-1398403:-1:exon
so has part: feature:1398064-1398160:-1:exon
so has part: feature:1395456-1396329:-1:exon
so has part: feature:1395024-1395154:-1:exon
so has part: feature:1392439-1394166:-1:exon

position:1392439:-1
position: 1392439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1452096:-1
position: 1452096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1450926-1452096:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1428592-1428804:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1427425-1427895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1426422-1426535:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1410198-1410438:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1408921-1409088:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1408032-1408347:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1406651-1406796:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1406454-1406563:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1404036-1404245:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1403299-1403506:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1399407-1399539:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1398910-1399082:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1398562-1398712:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1398272-1398403:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1398064-1398160:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1395456-1396329:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1395024-1395154:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1392439-1394166:-1:exon

ARID1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ARID1A
product: AT-rich interaction domain 1A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030464596.1
SIO_010081: ARID1A
subclass of: SO_0000673
so part of: ARID1A
location: complement(join(1392439..1394166,1395024..1395154,1395456..1396329,1398064..1398160,1398272..1398403,1398562..1398712,1398910..1399082,1399407..1399539,1403299..1403506,1404036..1404242,1406454..1406563,1406651..1406796,1408032..1408347,1408921..1409088,1409789..1409878,1410198..1410438,1426422..1426535,1427425..1427895,1428592..1428804,1450926..1452095))
location: region:1392439-1452095:-1
so has part: feature:1450926-1452095:-1:exon
so has part: feature:1428592-1428804:-1:exon
so has part: feature:1427425-1427895:-1:exon
so has part: feature:1426422-1426535:-1:exon
so has part: feature:1410198-1410438:-1:exon
so has part: feature:1409789-1409878:-1:exon
so has part: feature:1408921-1409088:-1:exon
so has part: feature:1408032-1408347:-1:exon
so has part: feature:1406651-1406796:-1:exon
so has part: feature:1406454-1406563:-1:exon
so has part: feature:1404036-1404242:-1:exon
so has part: feature:1403299-1403506:-1:exon
so has part: feature:1399407-1399539:-1:exon
so has part: feature:1398910-1399082:-1:exon
so has part: feature:1398562-1398712:-1:exon
so has part: feature:1398272-1398403:-1:exon
so has part: feature:1398064-1398160:-1:exon
so has part: feature:1395456-1396329:-1:exon
so has part: feature:1395024-1395154:-1:exon
so has part: feature:1392439-1394166:-1:exon

position:1452095:-1
position: 1452095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1450926-1452095:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1428592-1428804:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1427425-1427895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1426422-1426535:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1410198-1410438:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1409789-1409878:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1408921-1409088:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1408032-1408347:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1406651-1406796:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1406454-1406563:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1404036-1404242:-1:exon

position:1404242:-1
position: 1404242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1403299-1403506:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1399407-1399539:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1398910-1399082:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1398562-1398712:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1398272-1398403:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1398064-1398160:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1395456-1396329:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1395024-1395154:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1392439-1394166:-1:exon

ARID1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ARID1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-rich interactive domain-containing protein 1A isoform X3
translation: MAAQVAPAAASSLGAPAPSELKKAEAQQRDCPPEEAGGEAASERGGGGEKQAESEGPTGKELQDGAESNGGGAGAESDLKSSNGNPGPRPAAAAATLNNNLPEPPGGGGSSDGVGAPQQQQPPQQPPPSHPAALPPPAYGFGQPYGRGVQAAAAAAAAAAAAAFHQHGGQQSPGMAALQSGGLEQSYPGPAGAPAGPPPPQNSHGGAEHGFPNHQYNSYYAAGAGRSAGSYPPPPQAYALSSPRGSAQSSAPAVAGAKSPAAAAAFQQQRFGVMGPSAAGGAGGGGATPQPTATPTLNQLLTSPSSARGYQGYPGGDYSGGPQDGGTATKGPAAAEMVSQYGGGNSQGWAAASGGAPPRSHHAPMSPGSSGGGGGGQSLGRSQQPSSPMDQMGKMRPQPYGGNNPYTQQQGPQAGPQQGHGYPGQPYGPQTPQRYPMGMQSRTQSTMGSISYAQQIPPYGQQGPSAYGQQSQTPYYNQQSPHPQQQQQPPYSQQPPSQTPHSQPSYQQQQQQQPQSQPPQLQTSQPAYSQQQSQPPHQQSPTPYPQQQPTAQQHQQNQPPYSQQQSQSPYQQQQQTQQTPSSALSQQSSPYPASQPQQQQSAYSQQRFPPPQELSQDSFGSQTSSAPSMASSKGQEDMNLNLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGYMQRNPQMPQYSSPQPGSALSPRQSSGGQMHAGMGPYQQNSMGSYGPQGGQYGPQGGYPRQPNYNAMSNANYPSPGMGGSMNPMAAGSQMHGQTGVPPYSGLPPGRMSHATMGNRPYGPNMANMPPQVGTGMCPPPAGMNRKAQEAAAAAMHAAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYPMGGNMANNSAGMAASPEMMGLGDVKLTPATKMNNKADGTPKAESKSKKSSSSTTTNEKITKLYELGGEPERKIWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYISVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQTKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQMPPLPGIRSNSVGLQDAFADGSDPTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYSSMRKAPGSDPFMSSGQGPNSGMGDPYNRAAGPGMGNMAMGQRQHYSYGGPYDRVRTEPGMGPEGNLATGTPQPNILPSTPDSGMYSPSRYPQQQQQQQRHDSYGNQFSTQGTSSGSPFPSQQTTMYQQQQQNYKRPMDGSYGPPAKRHEGEMYNVPYSSGQGQTQQQLPPAQPQQPNQQQTAQPSPQQDLYNQYGSSYPAADRRAAGGPQNQFPFQFGRERVSAPPGSNAQQNIPPQMMGGPIQPAPEGPQQGAMWQGRNEMGYSYPNRQSTGSAPQGPAYHGVTRTDEILHSDQRVNHEGPWPSHGNRQPPYGPSAPVPPMTRPPQSNYQTPPSMQNHIPQVSSPAPLPRPLENRTSPSKSPFLHSGMKMQKAGPPVPASHITPAAVQPPLIRRDITFPPGSVEATQPVLKQRRRLTAKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPERFCKSSASSHEEGEEEEDEPRSLNCEEDEEDEEEEEAAFSSKDKAPLESSEEKLVSKFDKLPVKVVQKNDPFVVDYSDKLGRVQEFESGLLHWRIGGGDTTEHIQTHFESKTELPLTHKRASCSSALRKRSAAESNPSTREGETPPSDSSSEKRITATMDDMLSARPGSLAGEEEEVKPLETAKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCICVSNIIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLT…
SIO_010081: ARID1A
subclass of: SO_0000673
so part of: ARID1A
location: complement(join(1392439..1394166,1395024..1395154,1395456..1396329,1398064..1398160,1398272..1398403,1398562..1398712,1398910..1399082,1399407..1399539,1403299..1403506,1404036..1404245,1406454..1406563,1406651..1406796,1408032..1408347,1408921..1409088,1410198..1410438,1426422..1426535,1427425..1427895,1428592..1428804,1450926..1452077))
location: region:1392439-1452077:-1
so has part: feature:1450926-1452077:-1:exon
so has part: feature:1428592-1428804:-1:exon
so has part: feature:1427425-1427895:-1:exon
so has part: feature:1426422-1426535:-1:exon
so has part: feature:1410198-1410438:-1:exon
so has part: feature:1408921-1409088:-1:exon
so has part: feature:1408032-1408347:-1:exon
so has part: feature:1406651-1406796:-1:exon
so has part: feature:1406454-1406563:-1:exon
so has part: feature:1404036-1404245:-1:exon
so has part: feature:1403299-1403506:-1:exon
so has part: feature:1399407-1399539:-1:exon
so has part: feature:1398910-1399082:-1:exon
so has part: feature:1398562-1398712:-1:exon
so has part: feature:1398272-1398403:-1:exon
so has part: feature:1398064-1398160:-1:exon
so has part: feature:1395456-1396329:-1:exon
so has part: feature:1395024-1395154:-1:exon
so has part: feature:1392439-1394166:-1:exon

XP_030320457.1
type: Protein
SIO_000068: ncbiprotein

position:1452077:-1
position: 1452077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1450926-1452077:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1428592-1428804:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1427425-1427895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1426422-1426535:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1410198-1410438:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1408921-1409088:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1408032-1408347:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1406651-1406796:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1406454-1406563:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1404036-1404245:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1403299-1403506:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1399407-1399539:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1398910-1399082:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1398562-1398712:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1398272-1398403:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1398064-1398160:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1395456-1396329:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1395024-1395154:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1392439-1394166:-1:exon

ARID1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ARID1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-rich interactive domain-containing protein 1A isoform X2
translation: MAAQVAPAAASSLGAPAPSELKKAEAQQRDCPPEEAGGEAASERGGGGEKQAESEGPTGKELQDGAESNGGGAGAESDLKSSNGNPGPRPAAAAATLNNNLPEPPGGGGSSDGVGAPQQQQPPQQPPPSHPAALPPPAYGFGQPYGRGVQAAAAAAAAAAAAAFHQHGGQQSPGMAALQSGGLEQSYPGPAGAPAGPPPPQNSHGGAEHGFPNHQYNSYYAAGAGRSAGSYPPPPQAYALSSPRGSAQSSAPAVAGAKSPAAAAAFQQQRFGVMGPSAAGGAGGGGATPQPTATPTLNQLLTSPSSARGYQGYPGGDYSGGPQDGGTATKGPAAAEMVSQYGGGNSQGWAAASGGAPPRSHHAPMSPGSSGGGGGGQSLGRSQQPSSPMDQMGKMRPQPYGGNNPYTQQQGPQAGPQQGHGYPGQPYGPQTPQRYPMGMQSRTQSTMGSISYAQQIPPYGQQGPSAYGQQSQTPYYNQQSPHPQQQQQPPYSQQPPSQTPHSQPSYQQQQQQQPQSQPPQLQTSQPAYSQQQSQPPHQQSPTPYPQQQPTAQQHQQNQPPYSQQQSQSPYQQQQQTQQTPSSALSQQSSPYPASQPQQQQSAYSQQRFPPPQELSQDSFGSQTSSAPSMASSKGQEDMNLNLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPAMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQSSGGQMHAGMGPYQQNSMGSYGPQGGQYGPQGGYPRQPNYNAMSNANYPSPGMGGSMNPMAAGSQMHGQTGVPPYSGLPPGRMSHATMGNRPYGPNMANMPPQVGTGMCPPPAGMNRKAQEAAAAAMHAAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYPMGGNMANNSAGMAASPEMMGLGDVKLTPATKMNNKADGTPKAESKSKSSSSTTTNEKITKLYELGGEPERKIWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYISVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQTKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQMPPLPGIRSNSVGLQDAFADGSDPTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYSSMRKAPGSDPFMSSGQGPNSGMGDPYNRAAGPGMGNMAMGQRQHYSYGGPYDRVRTEPGMGPEGNLATGTPQPNILPSTPDSGMYSPSRYPQQQQQQQRHDSYGNQFSTQGTSSGSPFPSQQTTMYQQQQQNYKRPMDGSYGPPAKRHEGEMYNVPYSSGQGQTQQQLPPAQPQQPNQQQTAQPSPQQDLYNQYGSSYPAADRRAAGGPQNQFPFQFGRERVSAPPGSNAQQNIPPQMMGGPIQPAPEGPQQGAMWQGRNEMGYSYPNRQSTGSAPQGPAYHGVTRTDEILHSDQRVNHEGPWPSHGNRQPPYGPSAPVPPMTRPPQSNYQTPPSMQNHIPQVSSPAPLPRPLENRTSPSKSPFLHSGMKMQKAGPPVPASHITPAAVQPPLIRRDITFPPGSVEATQPVLKQRRRLTAKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPERFCKSSASSHEEGEEEEDEPRSLNCEEDEEDEEEEEAAFSSKDKAPLESSEEKLVSKFDKLPVKVVQKNDPFVVDYSDKLGRVQEFESGLLHWRIGGGDTTEHIQTHFESKTELPLTHKRASCSSALRKRSAAESNPSTREGETPPSDSSSEKRITATMDDMLSARPGSLAGEEEEVKPLETAKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCICVSNIIRSLSFVPGNDFEM…
SIO_010081: ARID1A
subclass of: SO_0000673
so part of: ARID1A
location: complement(join(1392439..1394166,1395024..1395154,1395456..1396329,1398064..1398160,1398272..1398403,1398562..1398712,1398910..1399082,1399407..1399539,1403299..1403506,1404036..1404242,1406454..1406563,1406651..1406796,1408032..1408347,1408921..1409088,1409789..1409878,1410198..1410438,1426422..1426535,1427425..1427895,1428592..1428804,1450926..1452077))
location: region:1392439-1452077:-1
so has part: feature:1450926-1452077:-1:exon
so has part: feature:1428592-1428804:-1:exon
so has part: feature:1427425-1427895:-1:exon
so has part: feature:1426422-1426535:-1:exon
so has part: feature:1410198-1410438:-1:exon
so has part: feature:1409789-1409878:-1:exon
so has part: feature:1408921-1409088:-1:exon
so has part: feature:1408032-1408347:-1:exon
so has part: feature:1406651-1406796:-1:exon
so has part: feature:1406454-1406563:-1:exon
so has part: feature:1404036-1404242:-1:exon
so has part: feature:1403299-1403506:-1:exon
so has part: feature:1399407-1399539:-1:exon
so has part: feature:1398910-1399082:-1:exon
so has part: feature:1398562-1398712:-1:exon
so has part: feature:1398272-1398403:-1:exon
so has part: feature:1398064-1398160:-1:exon
so has part: feature:1395456-1396329:-1:exon
so has part: feature:1395024-1395154:-1:exon
so has part: feature:1392439-1394166:-1:exon

XP_030320456.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1450926-1452077:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1428592-1428804:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1427425-1427895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1426422-1426535:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1410198-1410438:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1409789-1409878:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1408921-1409088:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1408032-1408347:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1406651-1406796:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1406454-1406563:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1404036-1404242:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1403299-1403506:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1399407-1399539:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1398910-1399082:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1398562-1398712:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1398272-1398403:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1398064-1398160:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1395456-1396329:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1395024-1395154:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1392439-1394166:-1:exon

ARID1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ARID1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-rich interactive domain-containing protein 1A isoform X1
translation: MAAQVAPAAASSLGAPAPSELKKAEAQQRDCPPEEAGGEAASERGGGGEKQAESEGPTGKELQDGAESNGGGAGAESDLKSSNGNPGPRPAAAAATLNNNLPEPPGGGGSSDGVGAPQQQQPPQQPPPSHPAALPPPAYGFGQPYGRGVQAAAAAAAAAAAAAFHQHGGQQSPGMAALQSGGLEQSYPGPAGAPAGPPPPQNSHGGAEHGFPNHQYNSYYAAGAGRSAGSYPPPPQAYALSSPRGSAQSSAPAVAGAKSPAAAAAFQQQRFGVMGPSAAGGAGGGGATPQPTATPTLNQLLTSPSSARGYQGYPGGDYSGGPQDGGTATKGPAAAEMVSQYGGGNSQGWAAASGGAPPRSHHAPMSPGSSGGGGGGQSLGRSQQPSSPMDQMGKMRPQPYGGNNPYTQQQGPQAGPQQGHGYPGQPYGPQTPQRYPMGMQSRTQSTMGSISYAQQIPPYGQQGPSAYGQQSQTPYYNQQSPHPQQQQQPPYSQQPPSQTPHSQPSYQQQQQQQPQSQPPQLQTSQPAYSQQQSQPPHQQSPTPYPQQQPTAQQHQQNQPPYSQQQSQSPYQQQQQTQQTPSSALSQQSSPYPASQPQQQQSAYSQQRFPPPQELSQDSFGSQTSSAPSMASSKGQEDMNLNLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPAMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQSSGGQMHAGMGPYQQNSMGSYGPQGGQYGPQGGYPRQPNYNAMSNANYPSPGMGGSMNPMAAGSQMHGQTGVPPYSGLPPGRMSHATMGNRPYGPNMANMPPQVGTGMCPPPAGMNRKAQEAAAAAMHAAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYPMGGNMANNSAGMAASPEMMGLGDVKLTPATKMNNKADGTPKAESKSKKSSSSTTTNEKITKLYELGGEPERKIWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYISVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQTKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQMPPLPGIRSNSVGLQDAFADGSDPTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYSSMRKAPGSDPFMSSGQGPNSGMGDPYNRAAGPGMGNMAMGQRQHYSYGGPYDRVRTEPGMGPEGNLATGTPQPNILPSTPDSGMYSPSRYPQQQQQQQRHDSYGNQFSTQGTSSGSPFPSQQTTMYQQQQQNYKRPMDGSYGPPAKRHEGEMYNVPYSSGQGQTQQQLPPAQPQQPNQQQTAQPSPQQDLYNQYGSSYPAADRRAAGGPQNQFPFQFGRERVSAPPGSNAQQNIPPQMMGGPIQPAPEGPQQGAMWQGRNEMGYSYPNRQSTGSAPQGPAYHGVTRTDEILHSDQRVNHEGPWPSHGNRQPPYGPSAPVPPMTRPPQSNYQTPPSMQNHIPQVSSPAPLPRPLENRTSPSKSPFLHSGMKMQKAGPPVPASHITPAAVQPPLIRRDITFPPGSVEATQPVLKQRRRLTAKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPERFCKSSASSHEEGEEEEDEPRSLNCEEDEEDEEEEEAAFSSKDKAPLESSEEKLVSKFDKLPVKVVQKNDPFVVDYSDKLGRVQEFESGLLHWRIGGGDTTEHIQTHFESKTELPLTHKRASCSSALRKRSAAESNPSTREGETPPSDSSSEKRITATMDDMLSARPGSLAGEEEEVKPLETAKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCICVSNIIRSLSFVPGNDFE…
SIO_010081: ARID1A
subclass of: SO_0000673
so part of: ARID1A
location: complement(join(1392439..1394166,1395024..1395154,1395456..1396329,1398064..1398160,1398272..1398403,1398562..1398712,1398910..1399082,1399407..1399539,1403299..1403506,1404036..1404245,1406454..1406563,1406651..1406796,1408032..1408347,1408921..1409088,1409789..1409878,1410198..1410438,1426422..1426535,1427425..1427895,1428592..1428804,1450926..1452077))
location: region:1392439-1452077:-1
so has part: feature:1450926-1452077:-1:exon
so has part: feature:1428592-1428804:-1:exon
so has part: feature:1427425-1427895:-1:exon
so has part: feature:1426422-1426535:-1:exon
so has part: feature:1410198-1410438:-1:exon
so has part: feature:1409789-1409878:-1:exon
so has part: feature:1408921-1409088:-1:exon
so has part: feature:1408032-1408347:-1:exon
so has part: feature:1406651-1406796:-1:exon
so has part: feature:1406454-1406563:-1:exon
so has part: feature:1404036-1404245:-1:exon
so has part: feature:1403299-1403506:-1:exon
so has part: feature:1399407-1399539:-1:exon
so has part: feature:1398910-1399082:-1:exon
so has part: feature:1398562-1398712:-1:exon
so has part: feature:1398272-1398403:-1:exon
so has part: feature:1398064-1398160:-1:exon
so has part: feature:1395456-1396329:-1:exon
so has part: feature:1395024-1395154:-1:exon
so has part: feature:1392439-1394166:-1:exon

XP_030320454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1450926-1452077:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1428592-1428804:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1427425-1427895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1426422-1426535:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1410198-1410438:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1409789-1409878:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1408921-1409088:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1408032-1408347:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1406651-1406796:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1406454-1406563:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1404036-1404245:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1403299-1403506:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1399407-1399539:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1398910-1399082:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1398562-1398712:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1398272-1398403:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1398064-1398160:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1395456-1396329:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1395024-1395154:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1392439-1394166:-1:exon

ARID1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ARID1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-rich interactive domain-containing protein 1A isoform X4
translation: MDQMGKMRPQPYGGNNPYTQQQGPQAGPQQGHGYPGQPYGPQTPQRYPMGMQSRTQSTMGSISYAQQIPPYGQQGPSAYGQQSQTPYYNQQSPHPQQQQQPPYSQQPPSQTPHSQPSYQQQQQQQPQSQPPQLQTSQPAYSQQQSQPPHQQSPTPYPQQQPTAQQHQQNQPPYSQQQSQSPYQQQQQTQQTPSSALSQQSSPYPASQPQQQQSAYSQQRFPPPQELSQDSFGSQTSSAPSMASSKGQEDMNLNLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPAMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQSSGGQMHAGMGPYQQNSMGSYGPQGGQYGPQGGYPRQPNYNAMSNANYPSPGMGGSMNPMAAGSQMHGQTGVPPYSGLPPGRMSHATMGNRPYGPNMANMPPQVGTGMCPPPAGMNRKAQEAAAAAMHAAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYPMGGNMANNSAGMAASPEMMGLGDVKLTPATKMNNKADGTPKAESKSKKSSSSTTTNEKITKLYELGGEPERKIWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYISVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQTKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQMPPLPGIRSNSVGLQDAFADGSDPTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYSSMRKAPGSDPFMSSGQGPNSGMGDPYNRAAGPGMGNMAMGQRQHYSYGGPYDRVRTEPGMGPEGNLATGTPQPNILPSTPDSGMYSPSRYPQQQQQQQRHDSYGNQFSTQGTSSGSPFPSQQTTMYQQQQQNYKRPMDGSYGPPAKRHEGEMYNVPYSSGQGQTQQQLPPAQPQQPNQQQTAQPSPQQDLYNQYGSSYPAADRRAAGGPQNQFPFQFGRERVSAPPGSNAQQNIPPQMMGGPIQPAPEGPQQGAMWQGRNEMGYSYPNRQSTGSAPQGPAYHGVTRTDEILHSDQRVNHEGPWPSHGNRQPPYGPSAPVPPMTRPPQSNYQTPPSMQNHIPQVSSPAPLPRPLENRTSPSKSPFLHSGMKMQKAGPPVPASHITPAAVQPPLIRRDITFPPGSVEATQPVLKQRRRLTAKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPERFCKSSASSHEEGEEEEDEPRSLNCEEDEEDEEEEEAAFSSKDKAPLESSEEKLVSKFDKLPVKVVQKNDPFVVDYSDKLGRVQEFESGLLHWRIGGGDTTEHIQTHFESKTELPLTHKRASCSSALRKRSAAESNPSTREGETPPSDSSSEKRITATMDDMLSARPGSLAGEEEEVKPLETAKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCICVSNIIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPILDGLLHWAVCPSAEAQDPFPTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQAGLMHMQNPPFESTSVDMMRRAARALLALAKVEENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
SIO_010081: ARID1A
subclass of: SO_0000673
so part of: ARID1A
location: complement(join(1392439..1394166,1395024..1395154,1395456..1396329,1398064..1398160,1398272..1398403,1398562..1398712,1398910..1399082,1399407..1399539,1403299..1403506,1404036..1404245,1406454..1406563,1406651..1406796,1408032..1408347,1408921..1409088,1409789..1409878,1410198..1410438,1426422..1426535,1427425..1427895,1428592..1428792))
location: region:1392439-1428792:-1
so has part: feature:1428592-1428792:-1:exon
so has part: feature:1427425-1427895:-1:exon
so has part: feature:1426422-1426535:-1:exon
so has part: feature:1410198-1410438:-1:exon
so has part: feature:1409789-1409878:-1:exon
so has part: feature:1408921-1409088:-1:exon
so has part: feature:1408032-1408347:-1:exon
so has part: feature:1406651-1406796:-1:exon
so has part: feature:1406454-1406563:-1:exon
so has part: feature:1404036-1404245:-1:exon
so has part: feature:1403299-1403506:-1:exon
so has part: feature:1399407-1399539:-1:exon
so has part: feature:1398910-1399082:-1:exon
so has part: feature:1398562-1398712:-1:exon
so has part: feature:1398272-1398403:-1:exon
so has part: feature:1398064-1398160:-1:exon
so has part: feature:1395456-1396329:-1:exon
so has part: feature:1395024-1395154:-1:exon
so has part: feature:1392439-1394166:-1:exon

XP_030320458.1
type: Protein
SIO_000068: ncbiprotein

position:1428792:-1
position: 1428792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1428592-1428792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1427425-1427895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1426422-1426535:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1410198-1410438:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1409789-1409878:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1408921-1409088:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1408032-1408347:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1406651-1406796:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1406454-1406563:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1404036-1404245:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1403299-1403506:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1399407-1399539:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1398910-1399082:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1398562-1398712:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1398272-1398403:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1398064-1398160:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1395456-1396329:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1395024-1395154:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1392439-1394166:-1:exon

RPS6KA1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: RPS6KA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1487057..1523148)
location: region:1487057-1523148:-1
so has part: feature:1487057-1523148:-1:exon
subclass of: SO_0000010

103535529
type: Gene
SIO_000068: ncbigene

position:1487057:-1
position: 1487057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1523148:-1
position: 1523148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1487057-1523148:-1:exon

RPS6KA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RPS6KA1
product: ribosomal protein S6 kinase A1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030464522.1
SIO_010081: RPS6KA1
subclass of: SO_0000673
so part of: RPS6KA1
location: complement(join(1487057..1488077,1488344..1488481,1489199..1489316,1489447..1489523,1490121..1490282,1490488..1490646,1490850..1490939,1491252..1491377,1492342..1492469,1493264..1493366,1494502..1494566,1494771..1494859,1495211..1495281,1495760..1495902,1496029..1496066,1496750..1496856,1497447..1497526,1498072..1498152,1498434..1498515,1499545..1499661,1504362..1504415,1517271..1517315,1522983..1523148))
location: region:1487057-1523148:-1
so has part: feature:1522983-1523148:-1:exon
so has part: feature:1517271-1517315:-1:exon
so has part: feature:1504362-1504415:-1:exon
so has part: feature:1499545-1499661:-1:exon
so has part: feature:1498434-1498515:-1:exon
so has part: feature:1498072-1498152:-1:exon
so has part: feature:1497447-1497526:-1:exon
so has part: feature:1496750-1496856:-1:exon
so has part: feature:1496029-1496066:-1:exon
so has part: feature:1495760-1495902:-1:exon
so has part: feature:1495211-1495281:-1:exon
so has part: feature:1494771-1494859:-1:exon
so has part: feature:1494502-1494566:-1:exon
so has part: feature:1493264-1493366:-1:exon
so has part: feature:1492342-1492469:-1:exon
so has part: feature:1491252-1491377:-1:exon
so has part: feature:1490850-1490939:-1:exon
so has part: feature:1490488-1490646:-1:exon
so has part: feature:1490121-1490282:-1:exon
so has part: feature:1489447-1489523:-1:exon
so has part: feature:1489199-1489316:-1:exon
so has part: feature:1488344-1488481:-1:exon
so has part: feature:1487057-1488077:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1522983-1523148:-1:exon

position:1522983:-1
position: 1522983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1517271-1517315:-1:exon

position:1517271:-1
position: 1517271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1517315:-1
position: 1517315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1504362-1504415:-1:exon

position:1504362:-1
position: 1504362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1504415:-1
position: 1504415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1499545-1499661:-1:exon

position:1499545:-1
position: 1499545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1499661:-1
position: 1499661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1498434-1498515:-1:exon

position:1498434:-1
position: 1498434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1498515:-1
position: 1498515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1498072-1498152:-1:exon

position:1498072:-1
position: 1498072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1498152:-1
position: 1498152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1497447-1497526:-1:exon

position:1497447:-1
position: 1497447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1497526:-1
position: 1497526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1496750-1496856:-1:exon

position:1496750:-1
position: 1496750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1496856:-1
position: 1496856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1496029-1496066:-1:exon

position:1496029:-1
position: 1496029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1496066:-1
position: 1496066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1495760-1495902:-1:exon

position:1495760:-1
position: 1495760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1495902:-1
position: 1495902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1495211-1495281:-1:exon

position:1495211:-1
position: 1495211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1495281:-1
position: 1495281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1494771-1494859:-1:exon

position:1494771:-1
position: 1494771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1494859:-1
position: 1494859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1494502-1494566:-1:exon

position:1494502:-1
position: 1494502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1494566:-1
position: 1494566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1493264-1493366:-1:exon

position:1493264:-1
position: 1493264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1493366:-1
position: 1493366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1492342-1492469:-1:exon

position:1492342:-1
position: 1492342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1492469:-1
position: 1492469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1491252-1491377:-1:exon

position:1491252:-1
position: 1491252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1491377:-1
position: 1491377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1490850-1490939:-1:exon

position:1490850:-1
position: 1490850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1490939:-1
position: 1490939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1490488-1490646:-1:exon

position:1490488:-1
position: 1490488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1490646:-1
position: 1490646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1490121-1490282:-1:exon

position:1490121:-1
position: 1490121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1490282:-1
position: 1490282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1489447-1489523:-1:exon

position:1489447:-1
position: 1489447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1489523:-1
position: 1489523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1489199-1489316:-1:exon

position:1489199:-1
position: 1489199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1489316:-1
position: 1489316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1488344-1488481:-1:exon

position:1488344:-1
position: 1488344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1488481:-1
position: 1488481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1487057-1488077:-1:exon

position:1488077:-1
position: 1488077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPS6KA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RPS6KA1
product: ribosomal protein S6 kinase A1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464521.1
SIO_010081: RPS6KA1
subclass of: SO_0000673
so part of: RPS6KA1
location: complement(join(1487057..1488077,1488344..1488481,1489199..1489316,1489447..1489523,1490121..1490282,1490488..1490646,1490850..1490939,1491252..1491377,1492342..1492469,1493264..1493366,1494502..1494566,1494771..1494859,1495211..1495281,1495760..1495902,1496029..1496066,1496750..1496856,1497447..1497526,1498072..1498152,1498434..1498515,1499545..1499661,1502276..1502450,1502541..1502716,1504362..1504415,1517271..1517315,1522983..1523148))
location: region:1487057-1523148:-1
so has part: feature:1522983-1523148:-1:exon
so has part: feature:1517271-1517315:-1:exon
so has part: feature:1504362-1504415:-1:exon
so has part: feature:1502541-1502716:-1:exon
so has part: feature:1502276-1502450:-1:exon
so has part: feature:1499545-1499661:-1:exon
so has part: feature:1498434-1498515:-1:exon
so has part: feature:1498072-1498152:-1:exon
so has part: feature:1497447-1497526:-1:exon
so has part: feature:1496750-1496856:-1:exon
so has part: feature:1496029-1496066:-1:exon
so has part: feature:1495760-1495902:-1:exon
so has part: feature:1495211-1495281:-1:exon
so has part: feature:1494771-1494859:-1:exon
so has part: feature:1494502-1494566:-1:exon
so has part: feature:1493264-1493366:-1:exon
so has part: feature:1492342-1492469:-1:exon
so has part: feature:1491252-1491377:-1:exon
so has part: feature:1490850-1490939:-1:exon
so has part: feature:1490488-1490646:-1:exon
so has part: feature:1490121-1490282:-1:exon
so has part: feature:1489447-1489523:-1:exon
so has part: feature:1489199-1489316:-1:exon
so has part: feature:1488344-1488481:-1:exon
so has part: feature:1487057-1488077:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1522983-1523148:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1517271-1517315:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1504362-1504415:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1502541-1502716:-1:exon

position:1502541:-1
position: 1502541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1502716:-1
position: 1502716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1502276-1502450:-1:exon

position:1502276:-1
position: 1502276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1502450:-1
position: 1502450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1499545-1499661:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1498434-1498515:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1498072-1498152:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1497447-1497526:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1496750-1496856:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1496029-1496066:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1495760-1495902:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1495211-1495281:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1494771-1494859:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1494502-1494566:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1493264-1493366:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1492342-1492469:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1491252-1491377:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1490850-1490939:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1490488-1490646:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1490121-1490282:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1489447-1489523:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1489199-1489316:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1488344-1488481:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1487057-1488077:-1:exon

RPS6KA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RPS6KA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal protein S6 kinase alpha-1 isoform X2
translation: MPLAQLAEPWPNMELVHLDTENGQVAPEEGGNPPAKAKSDITWIEKDLVDSADKGEGVVKEINITHHVKEGSEKADPSQFELLKVLGQGSFGKVFLVRKITPPDSNHLYAMKVLKKATLKVRDRLRTKIERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLSSEAQSLLRALFKRNPGNRLGSGPDGAEEIKRHPFYSTIDWNKLYRREIKPPFKPAVGQPDDTFYFDTEFTSRTPKDSPGMPPSAGAHQLFRGFSFVATGLMEDGKVKAAPSPLHSVVQQLHGKNLQLSDGYVVKEAIGSGSYSVCKRCIHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKYVYLVTELMRGGELLDKILRQKFFSEREASSVLHTICKTVEYLHSQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGVLLYTMLAGCTPFANGPSDTPEEILTRIGGGKFSISGGNWDTISDMAKDLVSKMLHVDPHQRLTAKQVLQHPWITQKDSLPQSQLNHQDVQLVKGAMAATYSALNSSKPSPQLKPIESSILAQRRVKKLPSTTL
SIO_010081: RPS6KA1
subclass of: SO_0000673
so part of: RPS6KA1
location: complement(join(1487955..1488077,1488344..1488481,1489199..1489316,1489447..1489523,1490121..1490282,1490488..1490646,1490850..1490939,1491252..1491377,1492342..1492469,1493264..1493366,1494502..1494566,1494771..1494859,1495211..1495281,1495760..1495902,1496029..1496066,1496750..1496856,1497447..1497526,1498072..1498152,1498434..1498515,1499545..1499661,1504362..1504415,1517271..1517315,1522983..1523045))
location: region:1487955-1523045:-1
so has part: feature:1522983-1523045:-1:exon
so has part: feature:1517271-1517315:-1:exon
so has part: feature:1504362-1504415:-1:exon
so has part: feature:1499545-1499661:-1:exon
so has part: feature:1498434-1498515:-1:exon
so has part: feature:1498072-1498152:-1:exon
so has part: feature:1497447-1497526:-1:exon
so has part: feature:1496750-1496856:-1:exon
so has part: feature:1496029-1496066:-1:exon
so has part: feature:1495760-1495902:-1:exon
so has part: feature:1495211-1495281:-1:exon
so has part: feature:1494771-1494859:-1:exon
so has part: feature:1494502-1494566:-1:exon
so has part: feature:1493264-1493366:-1:exon
so has part: feature:1492342-1492469:-1:exon
so has part: feature:1491252-1491377:-1:exon
so has part: feature:1490850-1490939:-1:exon
so has part: feature:1490488-1490646:-1:exon
so has part: feature:1490121-1490282:-1:exon
so has part: feature:1489447-1489523:-1:exon
so has part: feature:1489199-1489316:-1:exon
so has part: feature:1488344-1488481:-1:exon
so has part: feature:1487955-1488077:-1:exon

XP_030320382.1
type: Protein
SIO_000068: ncbiprotein

position:1487955:-1
position: 1487955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1523045:-1
position: 1523045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1522983-1523045:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1517271-1517315:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1504362-1504415:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1499545-1499661:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1498434-1498515:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1498072-1498152:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1497447-1497526:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1496750-1496856:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1496029-1496066:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1495760-1495902:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1495211-1495281:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1494771-1494859:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1494502-1494566:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1493264-1493366:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1492342-1492469:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1491252-1491377:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1490850-1490939:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1490488-1490646:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1490121-1490282:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1489447-1489523:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1489199-1489316:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1488344-1488481:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1487955-1488077:-1:exon

RPS6KA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RPS6KA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal protein S6 kinase alpha-1 isoform X1
translation: MPLAQLAEPWPNMELVHLDTENGQVAPEEGGNPPAKAKSDITWIEKDLVDSADKLGCNHLHLHPATSSVGFPCSQRSLPDPQDPSLLPWTHLFFPRTHLCFFGAIGASPRPHRSWWGWQFLGLCIGDGDKRMERDPKLPRICTLVMLWLQRRPRAKPCHQALPAPSPLPTLGEGVVKEINITHHVKEGSEKADPSQFELLKVLGQGSFGKVFLVRKITPPDSNHLYAMKVLKKATLKVRDRLRTKIERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLSSEAQSLLRALFKRNPGNRLGSGPDGAEEIKRHPFYSTIDWNKLYRREIKPPFKPAVGQPDDTFYFDTEFTSRTPKDSPGMPPSAGAHQLFRGFSFVATGLMEDGKVKAAPSPLHSVVQQLHGKNLQLSDGYVVKEAIGSGSYSVCKRCIHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKYVYLVTELMRGGELLDKILRQKFFSEREASSVLHTICKTVEYLHSQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGVLLYTMLAGCTPFANGPSDTPEEILTRIGGGKFSISGGNWDTISDMAKDLVSKMLHVDPHQRLTAKQVLQHPWITQKDSLPQSQLNHQDVQLVKGAMAATYSALNSSKPSPQLKPIESSILAQRRVKKLPSTTL
SIO_010081: RPS6KA1
subclass of: SO_0000673
so part of: RPS6KA1
location: complement(join(1487955..1488077,1488344..1488481,1489199..1489316,1489447..1489523,1490121..1490282,1490488..1490646,1490850..1490939,1491252..1491377,1492342..1492469,1493264..1493366,1494502..1494566,1494771..1494859,1495211..1495281,1495760..1495902,1496029..1496066,1496750..1496856,1497447..1497526,1498072..1498152,1498434..1498515,1499545..1499661,1502276..1502450,1502541..1502716,1504362..1504415,1517271..1517315,1522983..1523045))
location: region:1487955-1523045:-1
so has part: feature:1522983-1523045:-1:exon
so has part: feature:1517271-1517315:-1:exon
so has part: feature:1504362-1504415:-1:exon
so has part: feature:1502541-1502716:-1:exon
so has part: feature:1502276-1502450:-1:exon
so has part: feature:1499545-1499661:-1:exon
so has part: feature:1498434-1498515:-1:exon
so has part: feature:1498072-1498152:-1:exon
so has part: feature:1497447-1497526:-1:exon
so has part: feature:1496750-1496856:-1:exon
so has part: feature:1496029-1496066:-1:exon
so has part: feature:1495760-1495902:-1:exon
so has part: feature:1495211-1495281:-1:exon
so has part: feature:1494771-1494859:-1:exon
so has part: feature:1494502-1494566:-1:exon
so has part: feature:1493264-1493366:-1:exon
so has part: feature:1492342-1492469:-1:exon
so has part: feature:1491252-1491377:-1:exon
so has part: feature:1490850-1490939:-1:exon
so has part: feature:1490488-1490646:-1:exon
so has part: feature:1490121-1490282:-1:exon
so has part: feature:1489447-1489523:-1:exon
so has part: feature:1489199-1489316:-1:exon
so has part: feature:1488344-1488481:-1:exon
so has part: feature:1487955-1488077:-1:exon

XP_030320381.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1522983-1523045:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1517271-1517315:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1504362-1504415:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1502541-1502716:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1502276-1502450:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1499545-1499661:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1498434-1498515:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1498072-1498152:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1497447-1497526:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1496750-1496856:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1496029-1496066:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1495760-1495902:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1495211-1495281:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1494771-1494859:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1494502-1494566:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1493264-1493366:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1492342-1492469:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1491252-1491377:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1490850-1490939:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1490488-1490646:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1490121-1490282:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1489447-1489523:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1489199-1489316:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1488344-1488481:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1487955-1488077:-1:exon

HMGN2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: HMGN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1538885..1542667)
location: region:1538885-1542667:-1
so has part: feature:1538885-1542667:-1:exon
subclass of: SO_0000010

103535530
type: Gene
SIO_000068: ncbigene

position:1538885:-1
position: 1538885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1542667:-1
position: 1542667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1538885-1542667:-1:exon

HMGN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: HMGN2
product: high mobility group nucleosomal binding domain 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 long SRA read, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030464559.1
SIO_010081: HMGN2
subclass of: SO_0000673
so part of: HMGN2
location: complement(join(1538885..1539827,1540257..1540352,1540694..1540744,1541067..1541096,1541447..1541491,1542290..1542667))
location: region:1538885-1542667:-1
so has part: feature:1542290-1542667:-1:exon
so has part: feature:1541447-1541491:-1:exon
so has part: feature:1541067-1541096:-1:exon
so has part: feature:1540694-1540744:-1:exon
so has part: feature:1540257-1540352:-1:exon
so has part: feature:1538885-1539827:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1542290-1542667:-1:exon

position:1542290:-1
position: 1542290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1541447-1541491:-1:exon

position:1541447:-1
position: 1541447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1541491:-1
position: 1541491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1541067-1541096:-1:exon

position:1541067:-1
position: 1541067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1541096:-1
position: 1541096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1540694-1540744:-1:exon

position:1540694:-1
position: 1540694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1540744:-1
position: 1540744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1540257-1540352:-1:exon

position:1540257:-1
position: 1540257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1540352:-1
position: 1540352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1538885-1539827:-1:exon

position:1539827:-1
position: 1539827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HMGN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: HMGN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: non-histone chromosomal protein HMG-17
translation: MPKRKAEGDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPKPKKAAPKKSEKLPKGKKGKADAGKEGNNPAENGDAKTDQAQKAEGAGEAK
SIO_010081: HMGN2
subclass of: SO_0000673
so part of: HMGN2
location: complement(join(1539792..1539827,1540257..1540352,1540694..1540744,1541067..1541096,1541447..1541491,1542290..1542304))
location: region:1539792-1542304:-1
so has part: feature:1542290-1542304:-1:exon
so has part: feature:1541447-1541491:-1:exon
so has part: feature:1541067-1541096:-1:exon
so has part: feature:1540694-1540744:-1:exon
so has part: feature:1540257-1540352:-1:exon
so has part: feature:1539792-1539827:-1:exon

XP_030320419.1
type: Protein
SIO_000068: ncbiprotein

position:1539792:-1
position: 1539792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1542304:-1
position: 1542304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1542290-1542304:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1541447-1541491:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1541067-1541096:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1540694-1540744:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1540257-1540352:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1539792-1539827:-1:exon

DHDDS
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: DHDDS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1544422..1556813)
location: region:1544422-1556813:-1
so has part: feature:1544422-1556813:-1:exon
subclass of: SO_0000010

103535489
type: Gene
SIO_000068: ncbigene

position:1544422:-1
position: 1544422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1556813:-1
position: 1556813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1544422-1556813:-1:exon

DHDDS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: DHDDS
product: dehydrodolichyl diphosphate synthase subunit, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030464484.1
SIO_010081: DHDDS
subclass of: SO_0000673
so part of: DHDDS
location: complement(join(1544422..1545945,1548661..1548768,1550634..1550748,1551404..1551505,1551698..1551814,1552997..1553139,1554311..1554423,1555348..1555428))
location: region:1544422-1555428:-1
so has part: feature:1555348-1555428:-1:exon
so has part: feature:1554311-1554423:-1:exon
so has part: feature:1552997-1553139:-1:exon
so has part: feature:1551698-1551814:-1:exon
so has part: feature:1551404-1551505:-1:exon
so has part: feature:1550634-1550748:-1:exon
so has part: feature:1548661-1548768:-1:exon
so has part: feature:1544422-1545945:-1:exon

position:1555428:-1
position: 1555428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1555348-1555428:-1:exon

position:1555348:-1
position: 1555348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1554311-1554423:-1:exon

position:1554311:-1
position: 1554311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1554423:-1
position: 1554423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1552997-1553139:-1:exon

position:1552997:-1
position: 1552997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1553139:-1
position: 1553139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1551698-1551814:-1:exon

position:1551698:-1
position: 1551698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1551814:-1
position: 1551814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1551404-1551505:-1:exon

position:1551404:-1
position: 1551404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1551505:-1
position: 1551505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1550634-1550748:-1:exon

position:1550634:-1
position: 1550634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1550748:-1
position: 1550748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1548661-1548768:-1:exon

position:1548661:-1
position: 1548661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1548768:-1
position: 1548768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1544422-1545945:-1:exon

position:1545945:-1
position: 1545945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DHDDS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: DHDDS
product: dehydrodolichyl diphosphate synthase subunit, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_030464483.1
SIO_010081: DHDDS
subclass of: SO_0000673
so part of: DHDDS
location: complement(join(1544423..1545945,1548661..1548768,1550634..1550748,1551404..1551505,1551698..1551814,1552997..1553139,1554311..1554427,1555348..1555423,1556718..1556813))
location: region:1544423-1556813:-1
so has part: feature:1556718-1556813:-1:exon
so has part: feature:1555348-1555423:-1:exon
so has part: feature:1554311-1554427:-1:exon
so has part: feature:1552997-1553139:-1:exon
so has part: feature:1551698-1551814:-1:exon
so has part: feature:1551404-1551505:-1:exon
so has part: feature:1550634-1550748:-1:exon
so has part: feature:1548661-1548768:-1:exon
so has part: feature:1544423-1545945:-1:exon

position:1544423:-1
position: 1544423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1556718-1556813:-1:exon

position:1556718:-1
position: 1556718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1555348-1555423:-1:exon

position:1555423:-1
position: 1555423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1554311-1554427:-1:exon

position:1554427:-1
position: 1554427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1552997-1553139:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1551698-1551814:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1551404-1551505:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1550634-1550748:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1548661-1548768:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1544423-1545945:-1:exon

DHDDS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: DHDDS
product: dehydrodolichyl diphosphate synthase subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 1 long SRA read, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_030464481.1
SIO_010081: DHDDS
subclass of: SO_0000673
so part of: DHDDS
location: complement(join(1544423..1545945,1548661..1548768,1550634..1550748,1551404..1551505,1551698..1551814,1552997..1553139,1554311..1554427,1555348..1555426,1556718..1556813))
location: region:1544423-1556813:-1
so has part: feature:1556718-1556813:-1:exon
so has part: feature:1555348-1555426:-1:exon
so has part: feature:1554311-1554427:-1:exon
so has part: feature:1552997-1553139:-1:exon
so has part: feature:1551698-1551814:-1:exon
so has part: feature:1551404-1551505:-1:exon
so has part: feature:1550634-1550748:-1:exon
so has part: feature:1548661-1548768:-1:exon
so has part: feature:1544423-1545945:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1556718-1556813:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1555348-1555426:-1:exon

position:1555426:-1
position: 1555426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1554311-1554427:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1552997-1553139:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1551698-1551814:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1551404-1551505:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1550634-1550748:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1548661-1548768:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1544423-1545945:-1:exon

DHDDS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: DHDDS
product: dehydrodolichyl diphosphate synthase subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464482.1
SIO_010081: DHDDS
subclass of: SO_0000673
so part of: DHDDS
location: complement(join(1544423..1545945,1548661..1548768,1550634..1550748,1551404..1551505,1551698..1551814,1552997..1553139,1554311..1554427,1555348..1555426,1555510..1555612))
location: region:1544423-1555612:-1
so has part: feature:1555510-1555612:-1:exon
so has part: feature:1555348-1555426:-1:exon
so has part: feature:1554311-1554427:-1:exon
so has part: feature:1552997-1553139:-1:exon
so has part: feature:1551698-1551814:-1:exon
so has part: feature:1551404-1551505:-1:exon
so has part: feature:1550634-1550748:-1:exon
so has part: feature:1548661-1548768:-1:exon
so has part: feature:1544423-1545945:-1:exon

position:1555612:-1
position: 1555612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1555510-1555612:-1:exon

position:1555510:-1
position: 1555510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1555348-1555426:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1554311-1554427:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1552997-1553139:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1551698-1551814:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1551404-1551505:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1550634-1550748:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1548661-1548768:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1544423-1545945:-1:exon

DHDDS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: DHDDS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dehydrodolichyl diphosphate synthase complex subunit DHDDS isoform X1
translation: MSWIREGELTIIERFCANIIKAGPMPKHVAFIMDGNRRYAQKCHVERQQGHSQGFDKLAQTLRWCLNLGIQEVTVYAFSIENFKRSKEEVDGLMELARQKFSRLLEEQENLKKHGVCIRVLGDLPLLPLDIQELIAQAVLATRNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLEPSDVSESLLEKCLYTNNSPDPDLLIRTSGEVRLSDFLLWQTSHSCLVFQSVLWPEYSFWNLCEAILRFQMNYSALQKARNSYLEERRRQEMEKDQAYVTKKLQQEGFASHGDSRRRQTLLQKCTAMKEERIQGFLQALEHKRADFFERLCTVSA
SIO_010081: DHDDS
subclass of: SO_0000673
so part of: DHDDS
location: complement(join(1545709..1545945,1548661..1548768,1550634..1550748,1551404..1551505,1551698..1551814,1552997..1553139,1554311..1554427,1555348..1555410))
location: region:1545709-1555410:-1
so has part: feature:1555348-1555410:-1:exon
so has part: feature:1554311-1554427:-1:exon
so has part: feature:1552997-1553139:-1:exon
so has part: feature:1551698-1551814:-1:exon
so has part: feature:1551404-1551505:-1:exon
so has part: feature:1550634-1550748:-1:exon
so has part: feature:1548661-1548768:-1:exon
so has part: feature:1545709-1545945:-1:exon

XP_030320341.1
type: Protein
SIO_000068: ncbiprotein

position:1545709:-1
position: 1545709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1555410:-1
position: 1555410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1555348-1555410:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1554311-1554427:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1552997-1553139:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1551698-1551814:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1551404-1551505:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1550634-1550748:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1548661-1548768:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1545709-1545945:-1:exon

DHDDS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: DHDDS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dehydrodolichyl diphosphate synthase complex subunit DHDDS isoform X1
translation: MSWIREGELTIIERFCANIIKAGPMPKHVAFIMDGNRRYAQKCHVERQQGHSQGFDKLAQTLRWCLNLGIQEVTVYAFSIENFKRSKEEVDGLMELARQKFSRLLEEQENLKKHGVCIRVLGDLPLLPLDIQELIAQAVLATRNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLEPSDVSESLLEKCLYTNNSPDPDLLIRTSGEVRLSDFLLWQTSHSCLVFQSVLWPEYSFWNLCEAILRFQMNYSALQKARNSYLEERRRQEMEKDQAYVTKKLQQEGFASHGDSRRRQTLLQKCTAMKEERIQGFLQALEHKRADFFERLCTVSA
SIO_010081: DHDDS
subclass of: SO_0000673
so part of: DHDDS
location: complement(join(1545709..1545945,1548661..1548768,1550634..1550748,1551404..1551505,1551698..1551814,1552997..1553139,1554311..1554427,1555348..1555410))
location: region:1545709-1555410:-1
so has part: feature:1555348-1555410:-1:exon
so has part: feature:1554311-1554427:-1:exon
so has part: feature:1552997-1553139:-1:exon
so has part: feature:1551698-1551814:-1:exon
so has part: feature:1551404-1551505:-1:exon
so has part: feature:1550634-1550748:-1:exon
so has part: feature:1548661-1548768:-1:exon
so has part: feature:1545709-1545945:-1:exon

XP_030320342.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1555348-1555410:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1554311-1554427:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1552997-1553139:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1551698-1551814:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1551404-1551505:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1550634-1550748:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1548661-1548768:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1545709-1545945:-1:exon

DHDDS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: DHDDS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dehydrodolichyl diphosphate synthase complex subunit DHDDS isoform X1
translation: MSWIREGELTIIERFCANIIKAGPMPKHVAFIMDGNRRYAQKCHVERQQGHSQGFDKLAQTLRWCLNLGIQEVTVYAFSIENFKRSKEEVDGLMELARQKFSRLLEEQENLKKHGVCIRVLGDLPLLPLDIQELIAQAVLATRNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLEPSDVSESLLEKCLYTNNSPDPDLLIRTSGEVRLSDFLLWQTSHSCLVFQSVLWPEYSFWNLCEAILRFQMNYSALQKARNSYLEERRRQEMEKDQAYVTKKLQQEGFASHGDSRRRQTLLQKCTAMKEERIQGFLQALEHKRADFFERLCTVSA
SIO_010081: DHDDS
subclass of: SO_0000673
so part of: DHDDS
location: complement(join(1545709..1545945,1548661..1548768,1550634..1550748,1551404..1551505,1551698..1551814,1552997..1553139,1554311..1554427,1555348..1555410))
location: region:1545709-1555410:-1
so has part: feature:1555348-1555410:-1:exon
so has part: feature:1554311-1554427:-1:exon
so has part: feature:1552997-1553139:-1:exon
so has part: feature:1551698-1551814:-1:exon
so has part: feature:1551404-1551505:-1:exon
so has part: feature:1550634-1550748:-1:exon
so has part: feature:1548661-1548768:-1:exon
so has part: feature:1545709-1545945:-1:exon

XP_030320343.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1555348-1555410:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1554311-1554427:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1552997-1553139:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1551698-1551814:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1551404-1551505:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1550634-1550748:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1548661-1548768:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1545709-1545945:-1:exon

DHDDS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: DHDDS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dehydrodolichyl diphosphate synthase complex subunit DHDDS isoform X2
translation: MPKHVAFIMDGNRRYAQKCHVERQQGHSQGFDKLAQTLRWCLNLGIQEVTVYAFSIENFKRSKEEVDGLMELARQKFSRLLEEQENLKKHGVCIRVLGDLPLLPLDIQELIAQAVLATRNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLEPSDVSESLLEKCLYTNNSPDPDLLIRTSGEVRLSDFLLWQTSHSCLVFQSVLWPEYSFWNLCEAILRFQMNYSALQKARNSYLEERRRQEMEKDQAYVTKKLQQEGFASHGDSRRRQTLLQKCTAMKEERIQGFLQALEHKRADFFERLCTVSA
SIO_010081: DHDDS
subclass of: SO_0000673
so part of: DHDDS
location: complement(join(1545709..1545945,1548661..1548768,1550634..1550748,1551404..1551505,1551698..1551814,1552997..1553139,1554311..1554418))
location: region:1545709-1554418:-1
so has part: feature:1554311-1554418:-1:exon
so has part: feature:1552997-1553139:-1:exon
so has part: feature:1551698-1551814:-1:exon
so has part: feature:1551404-1551505:-1:exon
so has part: feature:1550634-1550748:-1:exon
so has part: feature:1548661-1548768:-1:exon
so has part: feature:1545709-1545945:-1:exon

XP_030320344.1
type: Protein
SIO_000068: ncbiprotein

position:1554418:-1
position: 1554418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1554311-1554418:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1552997-1553139:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1551698-1551814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1551404-1551505:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1550634-1550748:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1548661-1548768:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1545709-1545945:-1:exon

LIN28A
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LIN28A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1561926..1573704)
location: region:1561926-1573704:-1
so has part: feature:1561926-1573704:-1:exon
subclass of: SO_0000010

103535531
type: Gene
SIO_000068: ncbigene

position:1561926:-1
position: 1561926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1573704:-1
position: 1573704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1561926-1573704:-1:exon

LIN28A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LIN28A
product: lin-28 homolog A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
transcript id: XM_030464480.1
SIO_010081: LIN28A
subclass of: SO_0000673
so part of: LIN28A
location: complement(join(1561926..1562139,1563181..1563365,1572676..1572854,1573674..1573704))
location: region:1561926-1573704:-1
so has part: feature:1573674-1573704:-1:exon
so has part: feature:1572676-1572854:-1:exon
so has part: feature:1563181-1563365:-1:exon
so has part: feature:1561926-1562139:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1573674-1573704:-1:exon

position:1573674:-1
position: 1573674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1572676-1572854:-1:exon

position:1572676:-1
position: 1572676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1572854:-1
position: 1572854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1563181-1563365:-1:exon

position:1563181:-1
position: 1563181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1563365:-1
position: 1563365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1561926-1562139:-1:exon

position:1562139:-1
position: 1562139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LIN28A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LIN28A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein lin-28 homolog A
translation: MGSVSNQQFAGAKPGEEPAGDSPKAENEPQPLHGSGICKWFNVRMGFGFLSMTAKGGATLDSPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKKSSKGLESIRVTGPGGVFCIGSERRPKGKSLQKRRSKGDRCYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVANCPSKAQQSPSSQGKPGYFREEEEMHSSALLPETRE
SIO_010081: LIN28A
subclass of: SO_0000673
so part of: LIN28A
location: complement(join(1561926..1562139,1563181..1563365,1572676..1572854,1573674..1573704))
location: region:1561926-1573704:-1
so has part: feature:1573674-1573704:-1:exon
so has part: feature:1572676-1572854:-1:exon
so has part: feature:1563181-1563365:-1:exon
so has part: feature:1561926-1562139:-1:exon

XP_030320340.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1573674-1573704:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1572676-1572854:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1563181-1563365:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1561926-1562139:-1:exon

CRYBG2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: CRYBG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1583456..1591297
location: region:1583456-1591297:1
so has part: feature:1583456-1591297:1:exon
subclass of: SO_0000010

103535532
type: Gene
SIO_000068: ncbigene

position:1583456:1
position: 1583456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1591297:1
position: 1591297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1583456-1591297:1:exon

CRYBG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CRYBG2
product: crystallin beta-gamma domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_030464240.1
SIO_010081: CRYBG2
subclass of: SO_0000673
so part of: CRYBG2
location: join(1583456..1585450,1585935..1585982,1586075..1586193,1586485..1586641,1586743..1586882,1586971..1587097,1587328..1587363,1587442..1587569,1587765..1587891,1588165..1588307,1588389..1588515,1588665..1588697,1588816..1588928,1589108..1589237,1589413..1589552,1589648..1589771,1590447..1590605,1590912..1591071,1591209..1591297)
location: region:1583456-1591297:1
so has part: feature:1583456-1585450:1:exon
so has part: feature:1585935-1585982:1:exon
so has part: feature:1586075-1586193:1:exon
so has part: feature:1586485-1586641:1:exon
so has part: feature:1586743-1586882:1:exon
so has part: feature:1586971-1587097:1:exon
so has part: feature:1587328-1587363:1:exon
so has part: feature:1587442-1587569:1:exon
so has part: feature:1587765-1587891:1:exon
so has part: feature:1588165-1588307:1:exon
so has part: feature:1588389-1588515:1:exon
so has part: feature:1588665-1588697:1:exon
so has part: feature:1588816-1588928:1:exon
so has part: feature:1589108-1589237:1:exon
so has part: feature:1589413-1589552:1:exon
so has part: feature:1589648-1589771:1:exon
so has part: feature:1590447-1590605:1:exon
so has part: feature:1590912-1591071:1:exon
so has part: feature:1591209-1591297:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1583456-1585450:1:exon

position:1585450:1
position: 1585450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1585935-1585982:1:exon

position:1585935:1
position: 1585935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1585982:1
position: 1585982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1586075-1586193:1:exon

position:1586075:1
position: 1586075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1586193:1
position: 1586193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1586485-1586641:1:exon

position:1586485:1
position: 1586485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1586641:1
position: 1586641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1586743-1586882:1:exon

position:1586743:1
position: 1586743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1586882:1
position: 1586882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1586971-1587097:1:exon

position:1586971:1
position: 1586971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1587097:1
position: 1587097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1587328-1587363:1:exon

position:1587328:1
position: 1587328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1587363:1
position: 1587363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1587442-1587569:1:exon

position:1587442:1
position: 1587442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1587569:1
position: 1587569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1587765-1587891:1:exon

position:1587765:1
position: 1587765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1587891:1
position: 1587891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1588165-1588307:1:exon

position:1588165:1
position: 1588165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1588307:1
position: 1588307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1588389-1588515:1:exon

position:1588389:1
position: 1588389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1588515:1
position: 1588515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1588665-1588697:1:exon

position:1588665:1
position: 1588665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1588697:1
position: 1588697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1588816-1588928:1:exon

position:1588816:1
position: 1588816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1588928:1
position: 1588928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1589108-1589237:1:exon

position:1589108:1
position: 1589108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1589237:1
position: 1589237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1589413-1589552:1:exon

position:1589413:1
position: 1589413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1589552:1
position: 1589552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1589648-1589771:1:exon

position:1589648:1
position: 1589648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1589771:1
position: 1589771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1590447-1590605:1:exon

position:1590447:1
position: 1590447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1590605:1
position: 1590605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1590912-1591071:1:exon

position:1590912:1
position: 1590912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1591071:1
position: 1591071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1591209-1591297:1:exon

position:1591209:1
position: 1591209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CRYBG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CRYBG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta/gamma crystallin domain-containing protein 2
translation: MDSPLQHSKSRGFVSNTELSMKQAVPRAPGPEGRSCFQKVSLVSRRLENSRSTGGREGSPSRVSLLLQAWEREIVEKAASSPTTLTHRDRSPSSSSSSSINLKDFSTHGPIFSQVYSPAQKPRRQDERGKVEDGVPPPVGAPRDTGVHRESYVHGTLLPIRSAKHHSGGPGAGSGAGPGAGPGAPCVAEPGCVSGLPRARQVTVLRTGRDTARSEPGLVGGREAQNRVHDTAGATMAPSQSQEQDSSGFTAAVVGSESSPGTVETPEPLAEASPGEKESPQAGAAPQNATPKDGDSPGDPQSIRASCPQCPSEDTGGQADPAGVGEGSMADGDGTGSAMSPRTKSTPGADGTPENSSLELSDPKPSSEPPAPPKAELELEGGKKLENPQGTVQSSPESIPEPSSELPAPDSRSESPLSATEEDPELLVDMEIFVDTLRNMEPSEMRKAPKAPRQPRPSSLGRCTPLPPIQEDRVAPRGPLPLPEALRELLAQGTMGDSPEEEEVIENPYLSPEERALSGTLPRDSVGGDGQAEEDSLLGTLRKVVEEEKANVVSERNVLFRGNVLKGMALLSHFMEQRAATAEEAKPYSRLDNSVLYSRFVTPSTVPGGDGGCMGSPTHGDHNGLGPGGHPSLEMAVLEAPSPGSISPATEELENTMSLSLADIPQEDEEGFEKINTRPGKIILFSEAGFTGQKREIWGDVPDATSWELSHTISIRVIRGGWVMYEKPRFHGRKCVLAEGDVEINNPWTAYGQSGQRAGNHPFRIGSFKRVVRDYRIPRISLFAEENGEGARVEFSDSAEDTRTRGQPLAAASIIVHSGLWLMYSKPFFDDDPYVLEPGGYPNLKAWGAKDPSICSMHPIRLGCPVVERPGEPQVLIYEAASFQGSSFTISRDIYDLKSLPGLALPTVGSLRVLGGCWVGYEKEGFRGHQYLLEEGEYQDWKQWGGHDKELLSLRLIRTDFSDPALVLFEAMDFEEGPSVELSEALPDTQLAGYGTVTQSIHVLSGVWVAYEGTNFSGEQYILEKGVYRNCEDWGATDCRIASAQPILQVGEHNLHFVSKILLFSESDFLGDHVTFKEDQETLPDAFIPRSCRVRGGSWILFDGQNFAGEQHVLSEGEYPTLSAMGCLSSTTICSLKKVPVFFSEPSIFLHGLECFEGKEIELNTEVRSLQAEGFNNHVLSVRVKGGIWVLCEHGDFRGRQWLLDCTEITNWLTYSGLQHVGSLYPIRQRRIHFRIRSRELQLYLFVPDDVEDMKAGRVVVSSLSEQSSFVWYYEDGMIKNQVAPNMSLQVIGPAGKGAKAVLWSETRMPRQTWSIDSQGRIHSQMFEDMILDIKGGRSYDRDHAIVWDIAEDRPTQIWDIQVL
SIO_010081: CRYBG2
subclass of: SO_0000673
so part of: CRYBG2
location: join(1583456..1585450,1585935..1585982,1586075..1586193,1586485..1586641,1586743..1586882,1586971..1587097,1587328..1587363,1587442..1587569,1587765..1587891,1588165..1588307,1588389..1588515,1588665..1588697,1588816..1588928,1589108..1589237,1589413..1589552,1589648..1589771,1590447..1590605,1590912..1591071,1591209..1591297)
location: region:1583456-1591297:1
so has part: feature:1583456-1585450:1:exon
so has part: feature:1585935-1585982:1:exon
so has part: feature:1586075-1586193:1:exon
so has part: feature:1586485-1586641:1:exon
so has part: feature:1586743-1586882:1:exon
so has part: feature:1586971-1587097:1:exon
so has part: feature:1587328-1587363:1:exon
so has part: feature:1587442-1587569:1:exon
so has part: feature:1587765-1587891:1:exon
so has part: feature:1588165-1588307:1:exon
so has part: feature:1588389-1588515:1:exon
so has part: feature:1588665-1588697:1:exon
so has part: feature:1588816-1588928:1:exon
so has part: feature:1589108-1589237:1:exon
so has part: feature:1589413-1589552:1:exon
so has part: feature:1589648-1589771:1:exon
so has part: feature:1590447-1590605:1:exon
so has part: feature:1590912-1591071:1:exon
so has part: feature:1591209-1591297:1:exon

XP_030320100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1583456-1585450:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1585935-1585982:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1586075-1586193:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1586485-1586641:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1586743-1586882:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1586971-1587097:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1587328-1587363:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1587442-1587569:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1587765-1587891:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1588165-1588307:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1588389-1588515:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1588665-1588697:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1588816-1588928:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1589108-1589237:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1589413-1589552:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1589648-1589771:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1590447-1590605:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1590912-1591071:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1591209-1591297:1:exon

LOC115599581
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599581
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1592721..1594920)
location: region:1592721-1594920:-1
so has part: feature:1592721-1594920:-1:exon
subclass of: SO_0000011

115599581
type: Gene
SIO_000068: ncbigene

position:1592721:-1
position: 1592721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1594920:-1
position: 1594920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1592721-1594920:-1:exon

LOC115599581
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599581
product: uncharacterized LOC115599581
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_003988512.1
SIO_010081: LOC115599581
subclass of: SO_0000673
so part of: LOC115599581
location: complement(join(1592721..1592847,1594813..1594920))
location: region:1592721-1594920:-1
so has part: feature:1594813-1594920:-1:exon
so has part: feature:1592721-1592847:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1594813-1594920:-1:exon

position:1594813:-1
position: 1594813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1592721-1592847:-1:exon

position:1592847:-1
position: 1592847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UBXN11
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: UBXN11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1596446..1607222
location: region:1596446-1607222:1
so has part: feature:1596446-1607222:1:exon
subclass of: SO_0000010

103535534
type: Gene
SIO_000068: ncbigene

position:1596446:1
position: 1596446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1607222:1
position: 1607222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1596446-1607222:1:exon

UBXN11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: UBXN11
product: UBX domain protein 11
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030464241.1
SIO_010081: UBXN11
subclass of: SO_0000673
so part of: UBXN11
location: join(1596446..1596488,1597763..1597863,1598577..1598631,1599676..1599734,1600456..1600570,1601890..1602107,1602450..1602527,1603715..1603835,1604997..1605097,1605312..1605379,1606083..1606229,1606970..1607222)
location: region:1596446-1607222:1
so has part: feature:1596446-1596488:1:exon
so has part: feature:1597763-1597863:1:exon
so has part: feature:1598577-1598631:1:exon
so has part: feature:1599676-1599734:1:exon
so has part: feature:1600456-1600570:1:exon
so has part: feature:1601890-1602107:1:exon
so has part: feature:1602450-1602527:1:exon
so has part: feature:1603715-1603835:1:exon
so has part: feature:1604997-1605097:1:exon
so has part: feature:1605312-1605379:1:exon
so has part: feature:1606083-1606229:1:exon
so has part: feature:1606970-1607222:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1596446-1596488:1:exon

position:1596488:1
position: 1596488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1597763-1597863:1:exon

position:1597763:1
position: 1597763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1597863:1
position: 1597863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1598577-1598631:1:exon

position:1598577:1
position: 1598577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1598631:1
position: 1598631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1599676-1599734:1:exon

position:1599676:1
position: 1599676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1599734:1
position: 1599734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1600456-1600570:1:exon

position:1600456:1
position: 1600456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1600570:1
position: 1600570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1601890-1602107:1:exon

position:1601890:1
position: 1601890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1602107:1
position: 1602107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1602450-1602527:1:exon

position:1602450:1
position: 1602450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1602527:1
position: 1602527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1603715-1603835:1:exon

position:1603715:1
position: 1603715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1603835:1
position: 1603835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1604997-1605097:1:exon

position:1604997:1
position: 1604997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1605097:1
position: 1605097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1605312-1605379:1:exon

position:1605312:1
position: 1605312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1605379:1
position: 1605379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1606083-1606229:1:exon

position:1606083:1
position: 1606083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1606229:1
position: 1606229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1606970-1607222:1:exon

position:1606970:1
position: 1606970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBXN11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: UBXN11
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: UBX domain-containing protein 11
translation: MPGLVVLRGLSRLPHAACADTELMSSMMQKITLLEQKIEKQAEEIKLKDKRITELEEKMKTLQKREDAEELEMRCLELQTQVWEMERFLNDYGLIWVGERHEQLEDDELLKNEEELPVRSFWKPGEAVVSKPQIDFDQILENVKDLNVLAGEGTSQIEHTPGGARLRQAEPLSLTLYQNGIITFNGTFRPYEDPSTQQCLQDIMDGYFPSELQARYPDGIPLQVTDRRDVVFRERHLPGSFPGHGQVVGHSKSSELQETTKMPDPKLPLEQVNKLSKALKHGEEVTGTQDSAQAAQEGSNGVWSRKGILAETSRLSALERMKTAEEAEAPAPALCTLRIKSESGEQTYTIRMLLTETIGDLRQHLTHARGGDSDSYEIISTFPQRVYTDNSRSLQDCGLTPNTSLLLRRKDPSQQDGTELETASNKSCSPPALPGEGAASH
SIO_010081: UBXN11
subclass of: SO_0000673
so part of: UBXN11
location: join(1596446..1596488,1597763..1597863,1598577..1598631,1599676..1599734,1600456..1600570,1601890..1602107,1602450..1602527,1603715..1603835,1604997..1605097,1605312..1605379,1606083..1606229,1606970..1607190)
location: region:1596446-1607190:1
so has part: feature:1596446-1596488:1:exon
so has part: feature:1597763-1597863:1:exon
so has part: feature:1598577-1598631:1:exon
so has part: feature:1599676-1599734:1:exon
so has part: feature:1600456-1600570:1:exon
so has part: feature:1601890-1602107:1:exon
so has part: feature:1602450-1602527:1:exon
so has part: feature:1603715-1603835:1:exon
so has part: feature:1604997-1605097:1:exon
so has part: feature:1605312-1605379:1:exon
so has part: feature:1606083-1606229:1:exon
so has part: feature:1606970-1607190:1:exon

XP_030320101.1
type: Protein
SIO_000068: ncbiprotein

position:1607190:1
position: 1607190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1596446-1596488:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1597763-1597863:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1598577-1598631:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1599676-1599734:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1600456-1600570:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1601890-1602107:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1602450-1602527:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1603715-1603835:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1604997-1605097:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1605312-1605379:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1606083-1606229:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1606970-1607190:1:exon

SH3BGRL3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SH3BGRL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1608633..1610633)
location: region:1608633-1610633:-1
so has part: feature:1608633-1610633:-1:exon
subclass of: SO_0000010

103535491
type: Gene
SIO_000068: ncbigene

position:1608633:-1
position: 1608633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1610633:-1
position: 1610633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1608633-1610633:-1:exon

SH3BGRL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SH3BGRL3
product: SH3 domain binding glutamate rich protein like 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 32 ESTs, 1 long SRA read, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_008501551.2
SIO_010081: SH3BGRL3
subclass of: SO_0000673
so part of: SH3BGRL3
location: complement(join(1608633..1609588,1609941..1610108,1610426..1610633))
location: region:1608633-1610633:-1
so has part: feature:1610426-1610633:-1:exon
so has part: feature:1609941-1610108:-1:exon
so has part: feature:1608633-1609588:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1610426-1610633:-1:exon

position:1610426:-1
position: 1610426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1609941-1610108:-1:exon

position:1609941:-1
position: 1609941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1610108:-1
position: 1610108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1608633-1609588:-1:exon

position:1609588:-1
position: 1609588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SH3BGRL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SH3BGRL3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: SH3 domain-binding glutamic acid-rich-like protein 3
translation: MPGTAGPIGPRSHMQGGGGAAXDPSFPPSFPSQPLPSAGLSAGSGRDRSMSTLKVYSTSVTGSREIKSQQSEVTRILDGKNIKYELVDISQDNALREEMRAKAGNPKAIPPQIVNGDHYCGDYELFVEAVEQNTLQEFLKLA
SIO_010081: SH3BGRL3
subclass of: SO_0000673
so part of: SH3BGRL3
location: complement(join(1609523..1609588,1609941..1610108,1610426..1610618))
location: region:1609523-1610618:-1
so has part: feature:1610426-1610618:-1:exon
so has part: feature:1609941-1610108:-1:exon
so has part: feature:1609523-1609588:-1:exon

XP_008499773.2
type: Protein
SIO_000068: ncbiprotein

position:1609523:-1
position: 1609523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1610618:-1
position: 1610618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1610426-1610618:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1609941-1610108:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1609523-1609588:-1:exon

CEP85
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: CEP85
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1612067..1623523)
location: region:1612067-1623523:-1
so has part: feature:1612067-1623523:-1:exon
subclass of: SO_0000010

103535492
type: Gene
SIO_000068: ncbigene

position:1612067:-1
position: 1612067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1623523:-1
position: 1623523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1612067-1623523:-1:exon

CEP85
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CEP85
product: centrosomal protein 85, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008501553.2
SIO_010081: CEP85
subclass of: SO_0000673
so part of: CEP85
location: complement(join(1612067..1612875,1613282..1613510,1614115..1614222,1614306..1614356,1614777..1614897,1615372..1615526,1615773..1615925,1616288..1616473,1616834..1616951,1617379..1617509,1618109..1618827,1620977..1621129,1621762..1621833,1623465..1623523))
location: region:1612067-1623523:-1
so has part: feature:1623465-1623523:-1:exon
so has part: feature:1621762-1621833:-1:exon
so has part: feature:1620977-1621129:-1:exon
so has part: feature:1618109-1618827:-1:exon
so has part: feature:1617379-1617509:-1:exon
so has part: feature:1616834-1616951:-1:exon
so has part: feature:1616288-1616473:-1:exon
so has part: feature:1615773-1615925:-1:exon
so has part: feature:1615372-1615526:-1:exon
so has part: feature:1614777-1614897:-1:exon
so has part: feature:1614306-1614356:-1:exon
so has part: feature:1614115-1614222:-1:exon
so has part: feature:1613282-1613510:-1:exon
so has part: feature:1612067-1612875:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1623465-1623523:-1:exon

position:1623465:-1
position: 1623465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1621762-1621833:-1:exon

position:1621762:-1
position: 1621762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1621833:-1
position: 1621833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1620977-1621129:-1:exon

position:1620977:-1
position: 1620977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1621129:-1
position: 1621129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1618109-1618827:-1:exon

position:1618109:-1
position: 1618109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1618827:-1
position: 1618827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1617379-1617509:-1:exon

position:1617379:-1
position: 1617379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1617509:-1
position: 1617509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1616834-1616951:-1:exon

position:1616834:-1
position: 1616834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1616951:-1
position: 1616951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1616288-1616473:-1:exon

position:1616288:-1
position: 1616288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1616473:-1
position: 1616473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1615773-1615925:-1:exon

position:1615773:-1
position: 1615773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1615925:-1
position: 1615925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1615372-1615526:-1:exon

position:1615372:-1
position: 1615372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1615526:-1
position: 1615526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition