Calypte anna isolate BGI_N300 chromosome 22, bCalAnn1_v1.p, whole genome shotgun sequence.
type: Entry
definition: Calypte anna isolate BGI_N300 chromosome 22, bCalAnn1_v1.p, whole genome shotgun sequence.
sequence version: NC_044267.1
sequence date: 2019-08-24
sequence: sequence
division: CON
label: NC_044267.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA558503
dblink: SAMN02265252
keyword: WGS
keyword: RefSeq
source: Calypte anna (Anna's hummingbird)
organism: Calypte anna
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Apodiformes; Trochilidae; Calypte.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM012134.1.\nAssembly name: bCalAnn1_v1.p\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2019/05/16. The original whole-genome shotgun project has the\naccession RRCD00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 26-SEP-2018\nAssembly Method :: FALCON v. 5.1.1; FALCON unzip v. 1.0.2;\n scaff10X v. git 4.28.2018; Bionano Solve\n DLS v. 3.2.1; Salsa2 HiC v. 2.0;\n smrtanalysis Arrow polishing & gap\n filling v. 5.1.0.26412; longranger align\n v. 2.2.2; freebayes v. 1.2.0;\n purge_haplotigs v. bit 7.10.2018; gEVAL\n manual curation v. 2018-09-07\nAssembly Name :: bCalAnn1_v1.p\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 54.0x\nSequencing Technology :: PacBio RSII; 10X Genomics linked reads;\n Bionano Genomics DLS; Arima Genomics HiC\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Calypte anna Annotation Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 5198135
topology: linear
so has quality: SO_0000987
location: 1..5198135
location: region:1-5198135:1
RO_0002162: 9244

NC_044267
type: RefSeq
SIO_000068: refseq

PRJNA558503
type: BioProject
SIO_000068: bioproject

SAMN02265252
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5198135:1
position: 5198135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-5198135:1:source
so part of: sequence
organism: Calypte anna
mol type: genomic DNA
isolate: BGI_N300
chromosome: 22
sex: female
country: USA

9244
type: Taxonomy
SIO_000068: taxonomy

LOC115599559
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599559
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(33230..37557)
location: region:33230-37557:-1
so has part: feature:33230-37557:-1:exon
subclass of: SO_0000010

115599559
type: Gene
SIO_000068: ncbigene

position:33230:-1
position: 33230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37557:-1
position: 37557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33230-37557:-1:exon

LOC115599559
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC115599559
product: 3 beta-hydroxysteroid dehydrogenase type 7-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464125.1
SIO_010081: LOC115599559
subclass of: SO_0000673
so part of: LOC115599559
location: complement(join(33230..33569,34866..35027,35486..35585,36013..36121,36593..36621,36801..36937,37520..37557))
location: region:33230-37557:-1
so has part: feature:37520-37557:-1:exon
so has part: feature:36801-36937:-1:exon
so has part: feature:36593-36621:-1:exon
so has part: feature:36013-36121:-1:exon
so has part: feature:35486-35585:-1:exon
so has part: feature:34866-35027:-1:exon
so has part: feature:33230-33569:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:37520-37557:-1:exon

position:37520:-1
position: 37520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:36801-36937:-1:exon

position:36801:-1
position: 36801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36937:-1
position: 36937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:36593-36621:-1:exon

position:36593:-1
position: 36593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36621:-1
position: 36621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:36013-36121:-1:exon

position:36013:-1
position: 36013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36121:-1
position: 36121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:35486-35585:-1:exon

position:35486:-1
position: 35486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35585:-1
position: 35585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:34866-35027:-1:exon

position:34866:-1
position: 34866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35027:-1
position: 35027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:33230-33569:-1:exon

position:33569:-1
position: 33569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115599559
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC115599559
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 3 beta-hydroxysteroid dehydrogenase type 7-like
translation: MERGDPPDLRGRVVVVTGGAGFPGDAFGADAAGGGTGTEGAAGAGPGGTQRAATPGPSRAVAPWGRTLNVLAGCRSGGVKVLIYTSSMEVVGPNALGDPFLRGEEQTPYPVRHSHPYGRSKAQAERRVLEGNGMEVAGGGFPGVPVPAPHGDLWGGGLPLLAQIYREGKAGGGCPTPCPPTRSTDGCMWLLGLPPGGHFLPRVLLLLWAHLNSFLARFLPHFHPLLTPSTLAIASAPFTVRSSKAQRLLGYRPRYSWEEAQERTRKWSRSLD
SIO_010081: LOC115599559
subclass of: SO_0000673
so part of: LOC115599559
location: complement(join(33318..33569,34866..35027,35486..35585,36013..36121,36593..36621,36801..36937,37520..37549))
location: region:33318-37549:-1
so has part: feature:37520-37549:-1:exon
so has part: feature:36801-36937:-1:exon
so has part: feature:36593-36621:-1:exon
so has part: feature:36013-36121:-1:exon
so has part: feature:35486-35585:-1:exon
so has part: feature:34866-35027:-1:exon
so has part: feature:33318-33569:-1:exon

XP_030319985.1
type: Protein
SIO_000068: ncbiprotein

position:33318:-1
position: 33318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37549:-1
position: 37549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37520-37549:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:36801-36937:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:36593-36621:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:36013-36121:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:35486-35585:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:34866-35027:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:33318-33569:-1:exon

LOC115599560
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599560
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 34049..34349
location: region:34049-34349:1
so has part: feature:34049-34349:1:exon
subclass of: SO_0000011

115599560
type: Gene
SIO_000068: ncbigene

position:34049:1
position: 34049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34349:1
position: 34349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34049-34349:1:exon

LOC115599560
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599560
product: uncharacterized LOC115599560
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003988494.1
SIO_010081: LOC115599560
subclass of: SO_0000673
so part of: LOC115599560
location: join(34049..34090,34296..34349)
location: region:34049-34349:1
so has part: feature:34049-34090:1:exon
so has part: feature:34296-34349:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:34049-34090:1:exon

position:34090:1
position: 34090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:34296-34349:1:exon

position:34296:1
position: 34296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPIA
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PPIA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(48088..50568)
location: region:48088-50568:-1
so has part: feature:48088-50568:-1:exon
subclass of: SO_0000010

103525698
type: Gene
SIO_000068: ncbigene

position:48088:-1
position: 48088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50568:-1
position: 50568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48088-50568:-1:exon

PPIA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PPIA
product: peptidylprolyl isomerase A
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 4 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030464127.1
SIO_010081: PPIA
subclass of: SO_0000673
so part of: PPIA
location: complement(join(48088..48406,48516..48689,48858..48970,49056..49087,50407..50568))
location: region:48088-50568:-1
so has part: feature:50407-50568:-1:exon
so has part: feature:49056-49087:-1:exon
so has part: feature:48858-48970:-1:exon
so has part: feature:48516-48689:-1:exon
so has part: feature:48088-48406:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:50407-50568:-1:exon

position:50407:-1
position: 50407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:49056-49087:-1:exon

position:49056:-1
position: 49056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49087:-1
position: 49087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:48858-48970:-1:exon

position:48858:-1
position: 48858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48970:-1
position: 48970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:48516-48689:-1:exon

position:48516:-1
position: 48516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48689:-1
position: 48689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:48088-48406:-1:exon

position:48406:-1
position: 48406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPIA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PPIA
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 4 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase A
translation: MANPVVFFDISASGEPLGRVTFELFADKVPKDSSEMPFLLLENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFPDENFILKHTGPGILSMAMLGPTPTVPSSFICTAKTEWLDGKHVVFGRVKEGMNVVEAMERCGSKDGKTSKKITITDCGQLS
SIO_010081: PPIA
subclass of: SO_0000673
so part of: PPIA
location: complement(join(48269..48406,48516..48689,48858..48970,49056..49087,50407..50475))
location: region:48269-50475:-1
so has part: feature:50407-50475:-1:exon
so has part: feature:49056-49087:-1:exon
so has part: feature:48858-48970:-1:exon
so has part: feature:48516-48689:-1:exon
so has part: feature:48269-48406:-1:exon

XP_030319987.1
type: Protein
SIO_000068: ncbiprotein

position:48269:-1
position: 48269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50475:-1
position: 50475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50407-50475:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49056-49087:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48858-48970:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:48516-48689:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:48269-48406:-1:exon

ZMIZ2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ZMIZ2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(51817..58513)
location: region:51817-58513:-1
so has part: feature:51817-58513:-1:exon
subclass of: SO_0000010

103525697
type: Gene
SIO_000068: ncbigene

position:51817:-1
position: 51817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58513:-1
position: 58513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51817-58513:-1:exon

ZMIZ2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ZMIZ2
product: zinc finger MIZ-type containing 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 long SRA read, 11 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030463946.1
SIO_010081: ZMIZ2
subclass of: SO_0000673
so part of: ZMIZ2
location: complement(join(51817..52311,52433..52624,52717..52883,52964..53208,53302..53370,53460..53527,53619..53767,53972..54077,54151..54361,55062..55206,55649..55820,55903..55968,56050..56223,56306..56560,56642..56834,56921..57123,57229..57342,57432..57528,58278..58513))
location: region:51817-58513:-1
so has part: feature:58278-58513:-1:exon
so has part: feature:57432-57528:-1:exon
so has part: feature:57229-57342:-1:exon
so has part: feature:56921-57123:-1:exon
so has part: feature:56642-56834:-1:exon
so has part: feature:56306-56560:-1:exon
so has part: feature:56050-56223:-1:exon
so has part: feature:55903-55968:-1:exon
so has part: feature:55649-55820:-1:exon
so has part: feature:55062-55206:-1:exon
so has part: feature:54151-54361:-1:exon
so has part: feature:53972-54077:-1:exon
so has part: feature:53619-53767:-1:exon
so has part: feature:53460-53527:-1:exon
so has part: feature:53302-53370:-1:exon
so has part: feature:52964-53208:-1:exon
so has part: feature:52717-52883:-1:exon
so has part: feature:52433-52624:-1:exon
so has part: feature:51817-52311:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:58278-58513:-1:exon

position:58278:-1
position: 58278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:57432-57528:-1:exon

position:57432:-1
position: 57432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57528:-1
position: 57528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:57229-57342:-1:exon

position:57229:-1
position: 57229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57342:-1
position: 57342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:56921-57123:-1:exon

position:56921:-1
position: 56921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57123:-1
position: 57123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:56642-56834:-1:exon

position:56642:-1
position: 56642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56834:-1
position: 56834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:56306-56560:-1:exon

position:56306:-1
position: 56306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56560:-1
position: 56560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:56050-56223:-1:exon

position:56050:-1
position: 56050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56223:-1
position: 56223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:55903-55968:-1:exon

position:55903:-1
position: 55903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55968:-1
position: 55968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:55649-55820:-1:exon

position:55649:-1
position: 55649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55820:-1
position: 55820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:55062-55206:-1:exon

position:55062:-1
position: 55062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55206:-1
position: 55206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:54151-54361:-1:exon

position:54151:-1
position: 54151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54361:-1
position: 54361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:53972-54077:-1:exon

position:53972:-1
position: 53972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54077:-1
position: 54077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:53619-53767:-1:exon

position:53619:-1
position: 53619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53767:-1
position: 53767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:53460-53527:-1:exon

position:53460:-1
position: 53460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53527:-1
position: 53527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:53302-53370:-1:exon

position:53302:-1
position: 53302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53370:-1
position: 53370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:52964-53208:-1:exon

position:52964:-1
position: 52964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53208:-1
position: 53208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:52717-52883:-1:exon

position:52717:-1
position: 52717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52883:-1
position: 52883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:52433-52624:-1:exon

position:52433:-1
position: 52433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52624:-1
position: 52624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:51817-52311:-1:exon

position:52311:-1
position: 52311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZMIZ2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ZMIZ2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: zinc finger MIZ domain-containing protein 2
translation: MSSMNPMKPSLPPAPHGDGSFAYEAVPWQPSTNQPAGSLSVVXTVWGVSNTSQSQVFGSPMGPGGSSSSTPLLPGMAGTGSGMSSPPFMPQQPFTEGAPGKGYMQPGVYGRSAYPGGPGFTASYAGSPGTPAGMGIPSHTSRPPADFTQAAAAAAVAAAAATATATATATVAALQEKQSQELSQFSAMGAGQPFSSQFLPHAGPRGPATMSPAGIAGIMAPSSISPMNMSPARASGASPLYGGQRVPQHAYPGSPANQQLSRQGLKRAYSSEGYPAQQYLQGAQYAAAGAQYIPSAPQPSAPSPSFPGHRLQQGMSQYLSASGTAGPYYKTAEQFDGQSTGFSSYSQVAVTGPGRALPGYPSSPLAGNPTSPMTPGSGLPPYASPGQDVKSPFLPDMKPSVTSLHSSPSGPAPGEELRLTFPVRDGVVLEPFRLQHNLAVSNHVFQLRDSVYKTLMMRPDLELQFKCYHHEDRQMNTNWPASVQVSVNATPLTIERGDNKTSHKPLYLKHVCQPGRNTIQITVTACCCSHLFVLQLVHRPSVRSVLQGLIKKRLLPAEHCITKIKRNFSSGTIPGPNGEDGVEQTAIKVSLKCPITFRRIQLPARGHDCRHVQCFDLESYLQLNCERGTWRCPVCNKTALLEGLEVDQYMLGILIYIQNSDHEEITIDPTCSWKPVPVKPDLYVKEEPEGPALKRCRTLSPTHMVLPNIMEMIAALGPGSAPFPALAPPPAGAAADYGTTGSSFPAPGGFPEPFPTPGAPGTPTLSDFAPGHPPISYQPDIPGGLLAPEKPPLPAQLPPTGRMDPSHPPVQPGLHNPSPAQPLHHRSTPARPPLGLSGPTHAAELPFPATTGDGPEPALDLLPELTNPDELLSYLGPPDLPSSSNDDLLSLFENN
SIO_010081: ZMIZ2
subclass of: SO_0000673
so part of: ZMIZ2
location: complement(join(52204..52311,52433..52624,52717..52883,52964..53208,53302..53370,53460..53527,53619..53767,53972..54077,54151..54361,55062..55206,55649..55820,55903..55968,56050..56223,56306..56560,56642..56834,56921..57123,57229..57342,57432..57481))
location: region:52204-57481:-1
so has part: feature:57432-57481:-1:exon
so has part: feature:57229-57342:-1:exon
so has part: feature:56921-57123:-1:exon
so has part: feature:56642-56834:-1:exon
so has part: feature:56306-56560:-1:exon
so has part: feature:56050-56223:-1:exon
so has part: feature:55903-55968:-1:exon
so has part: feature:55649-55820:-1:exon
so has part: feature:55062-55206:-1:exon
so has part: feature:54151-54361:-1:exon
so has part: feature:53972-54077:-1:exon
so has part: feature:53619-53767:-1:exon
so has part: feature:53460-53527:-1:exon
so has part: feature:53302-53370:-1:exon
so has part: feature:52964-53208:-1:exon
so has part: feature:52717-52883:-1:exon
so has part: feature:52433-52624:-1:exon
so has part: feature:52204-52311:-1:exon

XP_030319806.1
type: Protein
SIO_000068: ncbiprotein

position:52204:-1
position: 52204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57481:-1
position: 57481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57432-57481:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:57229-57342:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:56921-57123:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:56642-56834:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:56306-56560:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:56050-56223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:55903-55968:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:55649-55820:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:55062-55206:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:54151-54361:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:53972-54077:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:53619-53767:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:53460-53527:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:53302-53370:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:52964-53208:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:52717-52883:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:52433-52624:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:52204-52311:-1:exon

OGDH
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: OGDH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(59765..93733)
location: region:59765-93733:-1
so has part: feature:59765-93733:-1:exon
subclass of: SO_0000010

103525681
type: Gene
SIO_000068: ncbigene

position:59765:-1
position: 59765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93733:-1
position: 93733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59765-93733:-1:exon

OGDH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: OGDH
product: oxoglutarate dehydrogenase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030463947.1
SIO_010081: OGDH
subclass of: SO_0000673
so part of: OGDH
location: complement(join(59765..59989,60074..60228,60320..60483,60974..61046,61546..61668,62129..62200,62337..62515,62596..62723,62801..62951,64646..64774,64961..65063,65703..65855,66204..66383,67329..67457,68399..68578,69425..69515,69983..70129,70561..70715,71878..71993,78386..78488,82273..82461,90310..90558,93630..93733))
location: region:59765-93733:-1
so has part: feature:93630-93733:-1:exon
so has part: feature:90310-90558:-1:exon
so has part: feature:82273-82461:-1:exon
so has part: feature:78386-78488:-1:exon
so has part: feature:71878-71993:-1:exon
so has part: feature:70561-70715:-1:exon
so has part: feature:69983-70129:-1:exon
so has part: feature:69425-69515:-1:exon
so has part: feature:68399-68578:-1:exon
so has part: feature:67329-67457:-1:exon
so has part: feature:66204-66383:-1:exon
so has part: feature:65703-65855:-1:exon
so has part: feature:64961-65063:-1:exon
so has part: feature:64646-64774:-1:exon
so has part: feature:62801-62951:-1:exon
so has part: feature:62596-62723:-1:exon
so has part: feature:62337-62515:-1:exon
so has part: feature:62129-62200:-1:exon
so has part: feature:61546-61668:-1:exon
so has part: feature:60974-61046:-1:exon
so has part: feature:60320-60483:-1:exon
so has part: feature:60074-60228:-1:exon
so has part: feature:59765-59989:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:93630-93733:-1:exon

position:93630:-1
position: 93630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:90310-90558:-1:exon

position:90310:-1
position: 90310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90558:-1
position: 90558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:82273-82461:-1:exon

position:82273:-1
position: 82273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82461:-1
position: 82461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:78386-78488:-1:exon

position:78386:-1
position: 78386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78488:-1
position: 78488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:71878-71993:-1:exon

position:71878:-1
position: 71878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71993:-1
position: 71993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:70561-70715:-1:exon

position:70561:-1
position: 70561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70715:-1
position: 70715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:69983-70129:-1:exon

position:69983:-1
position: 69983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70129:-1
position: 70129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:69425-69515:-1:exon

position:69425:-1
position: 69425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69515:-1
position: 69515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:68399-68578:-1:exon

position:68399:-1
position: 68399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68578:-1
position: 68578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:67329-67457:-1:exon

position:67329:-1
position: 67329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67457:-1
position: 67457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:66204-66383:-1:exon

position:66204:-1
position: 66204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66383:-1
position: 66383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:65703-65855:-1:exon

position:65703:-1
position: 65703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65855:-1
position: 65855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:64961-65063:-1:exon

position:64961:-1
position: 64961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65063:-1
position: 65063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:64646-64774:-1:exon

position:64646:-1
position: 64646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64774:-1
position: 64774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:62801-62951:-1:exon

position:62801:-1
position: 62801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62951:-1
position: 62951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:62596-62723:-1:exon

position:62596:-1
position: 62596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62723:-1
position: 62723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:62337-62515:-1:exon

position:62337:-1
position: 62337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62515:-1
position: 62515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:62129-62200:-1:exon

position:62129:-1
position: 62129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62200:-1
position: 62200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:61546-61668:-1:exon

position:61546:-1
position: 61546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61668:-1
position: 61668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:60974-61046:-1:exon

position:60974:-1
position: 60974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61046:-1
position: 61046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:60320-60483:-1:exon

position:60320:-1
position: 60320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60483:-1
position: 60483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:60074-60228:-1:exon

position:60074:-1
position: 60074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60228:-1
position: 60228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:59765-59989:-1:exon

position:59989:-1
position: 59989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OGDH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: OGDH
product: oxoglutarate dehydrogenase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030463949.1
SIO_010081: OGDH
subclass of: SO_0000673
so part of: OGDH
location: complement(join(59765..59989,60074..60228,60320..60483,60974..61046,61546..61668,62129..62200,62337..62515,62596..62723,62801..62951,64646..64774,64961..65063,65703..65855,66204..66383,67329..67457,68399..68578,69425..69515,69983..70129,70561..70715,71878..71993,78616..78706,82273..82461,90310..90558,93630..93733))
location: region:59765-93733:-1
so has part: feature:93630-93733:-1:exon
so has part: feature:90310-90558:-1:exon
so has part: feature:82273-82461:-1:exon
so has part: feature:78616-78706:-1:exon
so has part: feature:71878-71993:-1:exon
so has part: feature:70561-70715:-1:exon
so has part: feature:69983-70129:-1:exon
so has part: feature:69425-69515:-1:exon
so has part: feature:68399-68578:-1:exon
so has part: feature:67329-67457:-1:exon
so has part: feature:66204-66383:-1:exon
so has part: feature:65703-65855:-1:exon
so has part: feature:64961-65063:-1:exon
so has part: feature:64646-64774:-1:exon
so has part: feature:62801-62951:-1:exon
so has part: feature:62596-62723:-1:exon
so has part: feature:62337-62515:-1:exon
so has part: feature:62129-62200:-1:exon
so has part: feature:61546-61668:-1:exon
so has part: feature:60974-61046:-1:exon
so has part: feature:60320-60483:-1:exon
so has part: feature:60074-60228:-1:exon
so has part: feature:59765-59989:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:93630-93733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90310-90558:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82273-82461:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:78616-78706:-1:exon

position:78616:-1
position: 78616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78706:-1
position: 78706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:71878-71993:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:70561-70715:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:69983-70129:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:69425-69515:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:68399-68578:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:67329-67457:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:66204-66383:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:65703-65855:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:64961-65063:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:64646-64774:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:62801-62951:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:62596-62723:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:62337-62515:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:62129-62200:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:61546-61668:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:60974-61046:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:60320-60483:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:60074-60228:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:59765-59989:-1:exon

OGDH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: OGDH
product: oxoglutarate dehydrogenase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 1 long SRA read, 21 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030463948.1
SIO_010081: OGDH
subclass of: SO_0000673
so part of: OGDH
location: complement(join(59765..59989,60074..60228,60320..60483,60974..61046,61546..61668,62129..62200,62337..62515,62596..62723,62801..62951,64646..64774,64961..65063,65703..65855,66204..66383,67329..67457,68399..68578,69425..69515,69983..70129,70561..70715,71878..71993,78386..78488,82273..82461,90310..90558,93621..93730))
location: region:59765-93730:-1
so has part: feature:93621-93730:-1:exon
so has part: feature:90310-90558:-1:exon
so has part: feature:82273-82461:-1:exon
so has part: feature:78386-78488:-1:exon
so has part: feature:71878-71993:-1:exon
so has part: feature:70561-70715:-1:exon
so has part: feature:69983-70129:-1:exon
so has part: feature:69425-69515:-1:exon
so has part: feature:68399-68578:-1:exon
so has part: feature:67329-67457:-1:exon
so has part: feature:66204-66383:-1:exon
so has part: feature:65703-65855:-1:exon
so has part: feature:64961-65063:-1:exon
so has part: feature:64646-64774:-1:exon
so has part: feature:62801-62951:-1:exon
so has part: feature:62596-62723:-1:exon
so has part: feature:62337-62515:-1:exon
so has part: feature:62129-62200:-1:exon
so has part: feature:61546-61668:-1:exon
so has part: feature:60974-61046:-1:exon
so has part: feature:60320-60483:-1:exon
so has part: feature:60074-60228:-1:exon
so has part: feature:59765-59989:-1:exon

position:93730:-1
position: 93730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93621-93730:-1:exon

position:93621:-1
position: 93621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:90310-90558:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82273-82461:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:78386-78488:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:71878-71993:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:70561-70715:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:69983-70129:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:69425-69515:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:68399-68578:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:67329-67457:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:66204-66383:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:65703-65855:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:64961-65063:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:64646-64774:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:62801-62951:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:62596-62723:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:62337-62515:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:62129-62200:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:61546-61668:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:60974-61046:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:60320-60483:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:60074-60228:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:59765-59989:-1:exon

OGDH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: OGDH
product: oxoglutarate dehydrogenase, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 1 long SRA read, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030463950.1
SIO_010081: OGDH
subclass of: SO_0000673
so part of: OGDH
location: complement(join(59765..59989,60074..60228,60320..60483,60974..61046,61546..61668,62129..62200,62337..62515,62596..62723,62801..62951,64646..64774,64961..65063,65703..65855,66204..66383,67329..67457,68399..68578,69425..69515,69983..70129,70561..70715,71878..71993,78616..78706,82273..82461,90310..90558,93621..93721))
location: region:59765-93721:-1
so has part: feature:93621-93721:-1:exon
so has part: feature:90310-90558:-1:exon
so has part: feature:82273-82461:-1:exon
so has part: feature:78616-78706:-1:exon
so has part: feature:71878-71993:-1:exon
so has part: feature:70561-70715:-1:exon
so has part: feature:69983-70129:-1:exon
so has part: feature:69425-69515:-1:exon
so has part: feature:68399-68578:-1:exon
so has part: feature:67329-67457:-1:exon
so has part: feature:66204-66383:-1:exon
so has part: feature:65703-65855:-1:exon
so has part: feature:64961-65063:-1:exon
so has part: feature:64646-64774:-1:exon
so has part: feature:62801-62951:-1:exon
so has part: feature:62596-62723:-1:exon
so has part: feature:62337-62515:-1:exon
so has part: feature:62129-62200:-1:exon
so has part: feature:61546-61668:-1:exon
so has part: feature:60974-61046:-1:exon
so has part: feature:60320-60483:-1:exon
so has part: feature:60074-60228:-1:exon
so has part: feature:59765-59989:-1:exon

position:93721:-1
position: 93721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93621-93721:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90310-90558:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82273-82461:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:78616-78706:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:71878-71993:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:70561-70715:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:69983-70129:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:69425-69515:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:68399-68578:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:67329-67457:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:66204-66383:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:65703-65855:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:64961-65063:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:64646-64774:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:62801-62951:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:62596-62723:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:62337-62515:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:62129-62200:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:61546-61668:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:60974-61046:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:60320-60483:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:60074-60228:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:59765-59989:-1:exon

OGDH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: OGDH
product: oxoglutarate dehydrogenase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_008490646.2
SIO_010081: OGDH
subclass of: SO_0000673
so part of: OGDH
location: complement(join(59765..59989,60074..60228,60320..60483,60974..61046,61546..61668,62129..62200,62337..62515,62596..62723,62801..62951,64646..64774,64961..65063,65703..65855,66204..66383,67329..67457,68399..68578,69425..69515,69983..70129,70561..70715,71878..71993,78386..78488,82273..82461,90310..90561))
location: region:59765-90561:-1
so has part: feature:90310-90561:-1:exon
so has part: feature:82273-82461:-1:exon
so has part: feature:78386-78488:-1:exon
so has part: feature:71878-71993:-1:exon
so has part: feature:70561-70715:-1:exon
so has part: feature:69983-70129:-1:exon
so has part: feature:69425-69515:-1:exon
so has part: feature:68399-68578:-1:exon
so has part: feature:67329-67457:-1:exon
so has part: feature:66204-66383:-1:exon
so has part: feature:65703-65855:-1:exon
so has part: feature:64961-65063:-1:exon
so has part: feature:64646-64774:-1:exon
so has part: feature:62801-62951:-1:exon
so has part: feature:62596-62723:-1:exon
so has part: feature:62337-62515:-1:exon
so has part: feature:62129-62200:-1:exon
so has part: feature:61546-61668:-1:exon
so has part: feature:60974-61046:-1:exon
so has part: feature:60320-60483:-1:exon
so has part: feature:60074-60228:-1:exon
so has part: feature:59765-59989:-1:exon

position:90561:-1
position: 90561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90310-90561:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82273-82461:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78386-78488:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:71878-71993:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:70561-70715:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:69983-70129:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:69425-69515:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:68399-68578:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:67329-67457:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:66204-66383:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:65703-65855:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:64961-65063:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:64646-64774:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:62801-62951:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:62596-62723:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:62337-62515:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:62129-62200:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:61546-61668:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:60974-61046:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:60320-60483:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:60074-60228:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:59765-59989:-1:exon

OGDH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: OGDH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 2-oxoglutarate dehydrogenase, mitochondrial isoform X1
translation: MLNLRTCAAKLRPLTASQTVKTLSQHRPAAPRTFQQVRCYSAPVAAEPFLSGTSSNYVEEMYYAWLENPKSVHKSWDIFFRNANAGAVPGTAYQSPPPLSTSLSTLSQAQFLVQAQPSVDKLVEDHLAVQSLIRAYQIRGHHVAQLDPLGILDADLDSTLPADIITSTDKLGFYGLDESDLDKVFQLPTTTFIGGNESALPLREIIRRLEMAYCQHIGVEFMFINDLEQCQWIRQKFETPGIMQFTNEEKRTLLARLVRSTRFEEFLHRKWSSEKRFGLEGCEVLIPALKTIIDKSSEKGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDRNITLSLVANPSHLEAADPVVQGKTKAEQFYCGDTEGKKVMSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVVYVCNVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEPMFTQPLMYKQIRKQKPVLQKYAELLISQGVVNQPEYEEEIAKYDKICEEAHARSKDEKILHIKHWLDSPWPGFFTLDGQPRSMTCPSTGLNEEDLTHIGQVASSVPVEDFTIHGGLSRILKTRGEMVKNRTVDWALAEYMAFGSLLKEGIHIRLSGQDVERGTFSHRHHVLHDQNVDKRTCIPMNHLWPNQAPYTVCNSSLSEYGVLGFELGFAMASPNALVLWEAQFGDFHNTAQCIIDQFICPGQAKWVRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDPDVFPKLDDFDVRQLYECNWIVVNCSTPANFFHVLRRQILLPFRKPLIIFTPKSLLRHPEARSSFDDMLPGTHFLRVIPDTGPAAQNPEQVKRVLFCTGKVYYDLTRERKARQMEADVAITRVEQLSPFPFDLLQREAQKYPAAELVWCQEEHKNQGYYDYVKPRLRTTINRAKPVWYAGREPAAAPATGNKKTHLTELQRLLDTAFNLDAFKDLA
SIO_010081: OGDH
subclass of: SO_0000673
so part of: OGDH
location: complement(join(59869..59989,60074..60228,60320..60483,60974..61046,61546..61668,62129..62200,62337..62515,62596..62723,62801..62951,64646..64774,64961..65063,65703..65855,66204..66383,67329..67457,68399..68578,69425..69515,69983..70129,70561..70715,71878..71993,78386..78488,82273..82461,90310..90531))
location: region:59869-90531:-1
so has part: feature:90310-90531:-1:exon
so has part: feature:82273-82461:-1:exon
so has part: feature:78386-78488:-1:exon
so has part: feature:71878-71993:-1:exon
so has part: feature:70561-70715:-1:exon
so has part: feature:69983-70129:-1:exon
so has part: feature:69425-69515:-1:exon
so has part: feature:68399-68578:-1:exon
so has part: feature:67329-67457:-1:exon
so has part: feature:66204-66383:-1:exon
so has part: feature:65703-65855:-1:exon
so has part: feature:64961-65063:-1:exon
so has part: feature:64646-64774:-1:exon
so has part: feature:62801-62951:-1:exon
so has part: feature:62596-62723:-1:exon
so has part: feature:62337-62515:-1:exon
so has part: feature:62129-62200:-1:exon
so has part: feature:61546-61668:-1:exon
so has part: feature:60974-61046:-1:exon
so has part: feature:60320-60483:-1:exon
so has part: feature:60074-60228:-1:exon
so has part: feature:59869-59989:-1:exon

XP_030319807.1
type: Protein
SIO_000068: ncbiprotein

position:59869:-1
position: 59869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90531:-1
position: 90531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90310-90531:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82273-82461:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78386-78488:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:71878-71993:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:70561-70715:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:69983-70129:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:69425-69515:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:68399-68578:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:67329-67457:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:66204-66383:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:65703-65855:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:64961-65063:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:64646-64774:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:62801-62951:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:62596-62723:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:62337-62515:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:62129-62200:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:61546-61668:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:60974-61046:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:60320-60483:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:60074-60228:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:59869-59989:-1:exon

OGDH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: OGDH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 2-oxoglutarate dehydrogenase, mitochondrial isoform X1
translation: MLNLRTCAAKLRPLTASQTVKTLSQHRPAAPRTFQQVRCYSAPVAAEPFLSGTSSNYVEEMYYAWLENPKSVHKSWDIFFRNANAGAVPGTAYQSPPPLSTSLSTLSQAQFLVQAQPSVDKLVEDHLAVQSLIRAYQIRGHHVAQLDPLGILDADLDSTLPADIITSTDKLGFYGLDESDLDKVFQLPTTTFIGGNESALPLREIIRRLEMAYCQHIGVEFMFINDLEQCQWIRQKFETPGIMQFTNEEKRTLLARLVRSTRFEEFLHRKWSSEKRFGLEGCEVLIPALKTIIDKSSEKGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDRNITLSLVANPSHLEAADPVVQGKTKAEQFYCGDTEGKKVMSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVVYVCNVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEPMFTQPLMYKQIRKQKPVLQKYAELLISQGVVNQPEYEEEIAKYDKICEEAHARSKDEKILHIKHWLDSPWPGFFTLDGQPRSMTCPSTGLNEEDLTHIGQVASSVPVEDFTIHGGLSRILKTRGEMVKNRTVDWALAEYMAFGSLLKEGIHIRLSGQDVERGTFSHRHHVLHDQNVDKRTCIPMNHLWPNQAPYTVCNSSLSEYGVLGFELGFAMASPNALVLWEAQFGDFHNTAQCIIDQFICPGQAKWVRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDPDVFPKLDDFDVRQLYECNWIVVNCSTPANFFHVLRRQILLPFRKPLIIFTPKSLLRHPEARSSFDDMLPGTHFLRVIPDTGPAAQNPEQVKRVLFCTGKVYYDLTRERKARQMEADVAITRVEQLSPFPFDLLQREAQKYPAAELVWCQEEHKNQGYYDYVKPRLRTTINRAKPVWYAGREPAAAPATGNKKTHLTELQRLLDTAFNLDAFKDLA
SIO_010081: OGDH
subclass of: SO_0000673
so part of: OGDH
location: complement(join(59869..59989,60074..60228,60320..60483,60974..61046,61546..61668,62129..62200,62337..62515,62596..62723,62801..62951,64646..64774,64961..65063,65703..65855,66204..66383,67329..67457,68399..68578,69425..69515,69983..70129,70561..70715,71878..71993,78386..78488,82273..82461,90310..90531))
location: region:59869-90531:-1
so has part: feature:90310-90531:-1:exon
so has part: feature:82273-82461:-1:exon
so has part: feature:78386-78488:-1:exon
so has part: feature:71878-71993:-1:exon
so has part: feature:70561-70715:-1:exon
so has part: feature:69983-70129:-1:exon
so has part: feature:69425-69515:-1:exon
so has part: feature:68399-68578:-1:exon
so has part: feature:67329-67457:-1:exon
so has part: feature:66204-66383:-1:exon
so has part: feature:65703-65855:-1:exon
so has part: feature:64961-65063:-1:exon
so has part: feature:64646-64774:-1:exon
so has part: feature:62801-62951:-1:exon
so has part: feature:62596-62723:-1:exon
so has part: feature:62337-62515:-1:exon
so has part: feature:62129-62200:-1:exon
so has part: feature:61546-61668:-1:exon
so has part: feature:60974-61046:-1:exon
so has part: feature:60320-60483:-1:exon
so has part: feature:60074-60228:-1:exon
so has part: feature:59869-59989:-1:exon

XP_030319808.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90310-90531:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82273-82461:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78386-78488:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:71878-71993:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:70561-70715:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:69983-70129:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:69425-69515:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:68399-68578:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:67329-67457:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:66204-66383:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:65703-65855:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:64961-65063:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:64646-64774:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:62801-62951:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:62596-62723:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:62337-62515:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:62129-62200:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:61546-61668:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:60974-61046:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:60320-60483:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:60074-60228:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:59869-59989:-1:exon

OGDH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: OGDH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 2-oxoglutarate dehydrogenase, mitochondrial isoform X1
translation: MLNLRTCAAKLRPLTASQTVKTLSQHRPAAPRTFQQVRCYSAPVAAEPFLSGTSSNYVEEMYYAWLENPKSVHKSWDIFFRNANAGAVPGTAYQSPPPLSTSLSTLSQAQFLVQAQPSVDKLVEDHLAVQSLIRAYQIRGHHVAQLDPLGILDADLDSTLPADIITSTDKLGFYGLDESDLDKVFQLPTTTFIGGNESALPLREIIRRLEMAYCQHIGVEFMFINDLEQCQWIRQKFETPGIMQFTNEEKRTLLARLVRSTRFEEFLHRKWSSEKRFGLEGCEVLIPALKTIIDKSSEKGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDRNITLSLVANPSHLEAADPVVQGKTKAEQFYCGDTEGKKVMSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVVYVCNVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEPMFTQPLMYKQIRKQKPVLQKYAELLISQGVVNQPEYEEEIAKYDKICEEAHARSKDEKILHIKHWLDSPWPGFFTLDGQPRSMTCPSTGLNEEDLTHIGQVASSVPVEDFTIHGGLSRILKTRGEMVKNRTVDWALAEYMAFGSLLKEGIHIRLSGQDVERGTFSHRHHVLHDQNVDKRTCIPMNHLWPNQAPYTVCNSSLSEYGVLGFELGFAMASPNALVLWEAQFGDFHNTAQCIIDQFICPGQAKWVRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDPDVFPKLDDFDVRQLYECNWIVVNCSTPANFFHVLRRQILLPFRKPLIIFTPKSLLRHPEARSSFDDMLPGTHFLRVIPDTGPAAQNPEQVKRVLFCTGKVYYDLTRERKARQMEADVAITRVEQLSPFPFDLLQREAQKYPAAELVWCQEEHKNQGYYDYVKPRLRTTINRAKPVWYAGREPAAAPATGNKKTHLTELQRLLDTAFNLDAFKDLA
SIO_010081: OGDH
subclass of: SO_0000673
so part of: OGDH
location: complement(join(59869..59989,60074..60228,60320..60483,60974..61046,61546..61668,62129..62200,62337..62515,62596..62723,62801..62951,64646..64774,64961..65063,65703..65855,66204..66383,67329..67457,68399..68578,69425..69515,69983..70129,70561..70715,71878..71993,78386..78488,82273..82461,90310..90531))
location: region:59869-90531:-1
so has part: feature:90310-90531:-1:exon
so has part: feature:82273-82461:-1:exon
so has part: feature:78386-78488:-1:exon
so has part: feature:71878-71993:-1:exon
so has part: feature:70561-70715:-1:exon
so has part: feature:69983-70129:-1:exon
so has part: feature:69425-69515:-1:exon
so has part: feature:68399-68578:-1:exon
so has part: feature:67329-67457:-1:exon
so has part: feature:66204-66383:-1:exon
so has part: feature:65703-65855:-1:exon
so has part: feature:64961-65063:-1:exon
so has part: feature:64646-64774:-1:exon
so has part: feature:62801-62951:-1:exon
so has part: feature:62596-62723:-1:exon
so has part: feature:62337-62515:-1:exon
so has part: feature:62129-62200:-1:exon
so has part: feature:61546-61668:-1:exon
so has part: feature:60974-61046:-1:exon
so has part: feature:60320-60483:-1:exon
so has part: feature:60074-60228:-1:exon
so has part: feature:59869-59989:-1:exon

XP_008488868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90310-90531:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82273-82461:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78386-78488:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:71878-71993:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:70561-70715:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:69983-70129:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:69425-69515:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:68399-68578:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:67329-67457:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:66204-66383:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:65703-65855:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:64961-65063:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:64646-64774:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:62801-62951:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:62596-62723:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:62337-62515:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:62129-62200:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:61546-61668:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:60974-61046:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:60320-60483:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:60074-60228:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:59869-59989:-1:exon

OGDH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: OGDH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 2-oxoglutarate dehydrogenase, mitochondrial isoform X2
translation: MLNLRTCAAKLRPLTASQTVKTLSQHRPAAPRTFQQVRCYSAPVAAEPFLSGTSSNYVEEMYYAWLENPKSVHKSWDIFFRNANAGAVPGTAYQSPPPLSTSLSTLSQAQFLVQAQPSVDKLVEDHLAVQSLIRAYQVRGHHIAKLDPLGISCVNFDDAPVTVSPNVGFYGLDESDLDKVFQLPTTTFIGGNESALPLREIIRRLEMAYCQHIGVEFMFINDLEQCQWIRQKFETPGIMQFTNEEKRTLLARLVRSTRFEEFLHRKWSSEKRFGLEGCEVLIPALKTIIDKSSEKGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDRNITLSLVANPSHLEAADPVVQGKTKAEQFYCGDTEGKKVMSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVVYVCNVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEPMFTQPLMYKQIRKQKPVLQKYAELLISQGVVNQPEYEEEIAKYDKICEEAHARSKDEKILHIKHWLDSPWPGFFTLDGQPRSMTCPSTGLNEEDLTHIGQVASSVPVEDFTIHGGLSRILKTRGEMVKNRTVDWALAEYMAFGSLLKEGIHIRLSGQDVERGTFSHRHHVLHDQNVDKRTCIPMNHLWPNQAPYTVCNSSLSEYGVLGFELGFAMASPNALVLWEAQFGDFHNTAQCIIDQFICPGQAKWVRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDPDVFPKLDDFDVRQLYECNWIVVNCSTPANFFHVLRRQILLPFRKPLIIFTPKSLLRHPEARSSFDDMLPGTHFLRVIPDTGPAAQNPEQVKRVLFCTGKVYYDLTRERKARQMEADVAITRVEQLSPFPFDLLQREAQKYPAAELVWCQEEHKNQGYYDYVKPRLRTTINRAKPVWYAGREPAAAPATGNKKTHLTELQRLLDTAFNLDAFKDLA
SIO_010081: OGDH
subclass of: SO_0000673
so part of: OGDH
location: complement(join(59869..59989,60074..60228,60320..60483,60974..61046,61546..61668,62129..62200,62337..62515,62596..62723,62801..62951,64646..64774,64961..65063,65703..65855,66204..66383,67329..67457,68399..68578,69425..69515,69983..70129,70561..70715,71878..71993,78616..78706,82273..82461,90310..90531))
location: region:59869-90531:-1
so has part: feature:90310-90531:-1:exon
so has part: feature:82273-82461:-1:exon
so has part: feature:78616-78706:-1:exon
so has part: feature:71878-71993:-1:exon
so has part: feature:70561-70715:-1:exon
so has part: feature:69983-70129:-1:exon
so has part: feature:69425-69515:-1:exon
so has part: feature:68399-68578:-1:exon
so has part: feature:67329-67457:-1:exon
so has part: feature:66204-66383:-1:exon
so has part: feature:65703-65855:-1:exon
so has part: feature:64961-65063:-1:exon
so has part: feature:64646-64774:-1:exon
so has part: feature:62801-62951:-1:exon
so has part: feature:62596-62723:-1:exon
so has part: feature:62337-62515:-1:exon
so has part: feature:62129-62200:-1:exon
so has part: feature:61546-61668:-1:exon
so has part: feature:60974-61046:-1:exon
so has part: feature:60320-60483:-1:exon
so has part: feature:60074-60228:-1:exon
so has part: feature:59869-59989:-1:exon

XP_030319809.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90310-90531:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82273-82461:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78616-78706:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:71878-71993:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:70561-70715:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:69983-70129:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:69425-69515:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:68399-68578:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:67329-67457:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:66204-66383:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:65703-65855:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:64961-65063:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:64646-64774:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:62801-62951:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:62596-62723:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:62337-62515:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:62129-62200:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:61546-61668:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:60974-61046:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:60320-60483:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:60074-60228:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:59869-59989:-1:exon

OGDH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: OGDH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 2-oxoglutarate dehydrogenase, mitochondrial isoform X2
translation: MLNLRTCAAKLRPLTASQTVKTLSQHRPAAPRTFQQVRCYSAPVAAEPFLSGTSSNYVEEMYYAWLENPKSVHKSWDIFFRNANAGAVPGTAYQSPPPLSTSLSTLSQAQFLVQAQPSVDKLVEDHLAVQSLIRAYQVRGHHIAKLDPLGISCVNFDDAPVTVSPNVGFYGLDESDLDKVFQLPTTTFIGGNESALPLREIIRRLEMAYCQHIGVEFMFINDLEQCQWIRQKFETPGIMQFTNEEKRTLLARLVRSTRFEEFLHRKWSSEKRFGLEGCEVLIPALKTIIDKSSEKGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDRNITLSLVANPSHLEAADPVVQGKTKAEQFYCGDTEGKKVMSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVVYVCNVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEPMFTQPLMYKQIRKQKPVLQKYAELLISQGVVNQPEYEEEIAKYDKICEEAHARSKDEKILHIKHWLDSPWPGFFTLDGQPRSMTCPSTGLNEEDLTHIGQVASSVPVEDFTIHGGLSRILKTRGEMVKNRTVDWALAEYMAFGSLLKEGIHIRLSGQDVERGTFSHRHHVLHDQNVDKRTCIPMNHLWPNQAPYTVCNSSLSEYGVLGFELGFAMASPNALVLWEAQFGDFHNTAQCIIDQFICPGQAKWVRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDPDVFPKLDDFDVRQLYECNWIVVNCSTPANFFHVLRRQILLPFRKPLIIFTPKSLLRHPEARSSFDDMLPGTHFLRVIPDTGPAAQNPEQVKRVLFCTGKVYYDLTRERKARQMEADVAITRVEQLSPFPFDLLQREAQKYPAAELVWCQEEHKNQGYYDYVKPRLRTTINRAKPVWYAGREPAAAPATGNKKTHLTELQRLLDTAFNLDAFKDLA
SIO_010081: OGDH
subclass of: SO_0000673
so part of: OGDH
location: complement(join(59869..59989,60074..60228,60320..60483,60974..61046,61546..61668,62129..62200,62337..62515,62596..62723,62801..62951,64646..64774,64961..65063,65703..65855,66204..66383,67329..67457,68399..68578,69425..69515,69983..70129,70561..70715,71878..71993,78616..78706,82273..82461,90310..90531))
location: region:59869-90531:-1
so has part: feature:90310-90531:-1:exon
so has part: feature:82273-82461:-1:exon
so has part: feature:78616-78706:-1:exon
so has part: feature:71878-71993:-1:exon
so has part: feature:70561-70715:-1:exon
so has part: feature:69983-70129:-1:exon
so has part: feature:69425-69515:-1:exon
so has part: feature:68399-68578:-1:exon
so has part: feature:67329-67457:-1:exon
so has part: feature:66204-66383:-1:exon
so has part: feature:65703-65855:-1:exon
so has part: feature:64961-65063:-1:exon
so has part: feature:64646-64774:-1:exon
so has part: feature:62801-62951:-1:exon
so has part: feature:62596-62723:-1:exon
so has part: feature:62337-62515:-1:exon
so has part: feature:62129-62200:-1:exon
so has part: feature:61546-61668:-1:exon
so has part: feature:60974-61046:-1:exon
so has part: feature:60320-60483:-1:exon
so has part: feature:60074-60228:-1:exon
so has part: feature:59869-59989:-1:exon

XP_030319810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90310-90531:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82273-82461:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78616-78706:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:71878-71993:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:70561-70715:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:69983-70129:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:69425-69515:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:68399-68578:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:67329-67457:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:66204-66383:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:65703-65855:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:64961-65063:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:64646-64774:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:62801-62951:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:62596-62723:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:62337-62515:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:62129-62200:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:61546-61668:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:60974-61046:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:60320-60483:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:60074-60228:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:59869-59989:-1:exon

LOC103525680
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103525680
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 95121..96771
location: region:95121-96771:1
so has part: feature:95121-96771:1:exon
subclass of: SO_0000010

103525680
type: Gene
SIO_000068: ncbigene

position:95121:1
position: 95121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96771:1
position: 96771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95121-96771:1:exon

LOC103525680
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103525680
product: interleukin-1 receptor antagonist protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_008490643.2
SIO_010081: LOC103525680
subclass of: SO_0000673
so part of: LOC103525680
location: join(95121..95201,95315..95363,95447..95636,95723..95893,96007..96152,96282..96771)
location: region:95121-96771:1
so has part: feature:95121-95201:1:exon
so has part: feature:95315-95363:1:exon
so has part: feature:95447-95636:1:exon
so has part: feature:95723-95893:1:exon
so has part: feature:96007-96152:1:exon
so has part: feature:96282-96771:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:95121-95201:1:exon

position:95201:1
position: 95201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:95315-95363:1:exon

position:95315:1
position: 95315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95363:1
position: 95363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:95447-95636:1:exon

position:95447:1
position: 95447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95636:1
position: 95636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:95723-95893:1:exon

position:95723:1
position: 95723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95893:1
position: 95893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:96007-96152:1:exon

position:96007:1
position: 96007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96152:1
position: 96152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:96282-96771:1:exon

position:96282:1
position: 96282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC103525680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103525680
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-1 receptor antagonist protein-like
translation: MAFVPDLDTLESSSLNEEIFYSTEGLCPQKKLRLDSEMTSSEVDIQVTVTNEHPTWTFRRAAVLVVATAKLLKRPAYEDFVDSDLGGFLDRVFEPVSFQRMEVSCAGAPVYRYTRSQSFDIFDIDHKCFVLESPTQLVALHLQGPSAGRKVKLNIALYRPQASEGGLGAGRVPVALGIKGYHLYMSCVMSGAEPVLQLEEADIRRDIESVELTRFIFYRLDSPTEGTTRFESAAFPGWFICTSLQPRQPVSITNHPDQVNIATYELSGH
SIO_010081: LOC103525680
subclass of: SO_0000673
so part of: LOC103525680
location: join(95161..95201,95315..95363,95447..95636,95723..95893,96007..96152,96282..96494)
location: region:95161-96494:1
so has part: feature:95161-95201:1:exon
so has part: feature:95315-95363:1:exon
so has part: feature:95447-95636:1:exon
so has part: feature:95723-95893:1:exon
so has part: feature:96007-96152:1:exon
so has part: feature:96282-96494:1:exon

XP_008488865.1
type: Protein
SIO_000068: ncbiprotein

position:95161:1
position: 95161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96494:1
position: 96494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95161-95201:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:95315-95363:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:95447-95636:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95723-95893:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:96007-96152:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:96282-96494:1:exon

CKAP2L
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: CKAP2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 97891..105206
location: region:97891-105206:1
so has part: feature:97891-105206:1:exon
subclass of: SO_0000010

103525696
type: Gene
SIO_000068: ncbigene

position:97891:1
position: 97891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105206:1
position: 105206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97891-105206:1:exon

CKAP2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CKAP2L
product: cytoskeleton associated protein 2 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030463999.1
SIO_010081: CKAP2L
subclass of: SO_0000673
so part of: CKAP2L
location: join(97891..98021,99041..99107,100884..100950,101296..102404,102825..103017,103685..103840,104319..104382,104663..104810,104907..105206)
location: region:97891-105206:1
so has part: feature:97891-98021:1:exon
so has part: feature:99041-99107:1:exon
so has part: feature:100884-100950:1:exon
so has part: feature:101296-102404:1:exon
so has part: feature:102825-103017:1:exon
so has part: feature:103685-103840:1:exon
so has part: feature:104319-104382:1:exon
so has part: feature:104663-104810:1:exon
so has part: feature:104907-105206:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:97891-98021:1:exon

position:98021:1
position: 98021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:99041-99107:1:exon

position:99041:1
position: 99041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99107:1
position: 99107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:100884-100950:1:exon

position:100884:1
position: 100884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100950:1
position: 100950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:101296-102404:1:exon

position:101296:1
position: 101296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102404:1
position: 102404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:102825-103017:1:exon

position:102825:1
position: 102825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103017:1
position: 103017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:103685-103840:1:exon

position:103685:1
position: 103685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103840:1
position: 103840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:104319-104382:1:exon

position:104319:1
position: 104319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104382:1
position: 104382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:104663-104810:1:exon

position:104663:1
position: 104663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104810:1
position: 104810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:104907-105206:1:exon

position:104907:1
position: 104907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CKAP2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CKAP2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoskeleton-associated protein 2-like isoform X2
translation: MERDGAAAAAAAGGERRRWFQDDVTAKERLKCSNAKPYLKNQTNCLDPALAPVSKLQHVDRNKKDVSRNVVKGPQRNGKPGVKSTQHVGHTAQQKPSNTSQRAAVVQPEQPRRGTKLPLGHVPSMSHPTQPRGRLLTSTSTRPNPKRTKKPSQETVTTAAPLANSDHALPRAPSSLNQGLQDRLVCNKENLQAQGSAQPVLNRVFKSDGNNLGNKRVLAHKQSSVMMSRTVTGPKDRISSHQARQEPSQDKFRKPLPGSKSMSQKPSVKTQLLQPPWSLSASTNLLHKKMGANQEKTHPAREAGVKPQGRLPVGGLEHHSGPPQVKRNSIKPPASSRLWRPTNPTPSLKAGGTLQWQRPLEKGAVKDAKAASQVTVTQNQPGSTHSSKTPSLVSGLRSGGDRLKAEAHKPGGIQARRVPRTPSAADRKKQLQEWLASKGKTYKRPPMMLLQKQPAKLSWRSTKEKEKQEKPEQLLLEKINNIFTECLKLIEEGAQAEEVSALLSRVPQAEKFAKFWICKAKLLSQNGPFDVTGLYKAAVCAGAAPLQELREVVLDILKATDQTSGGDEAVHPLPLEPTTPCSSEKQHVAATPCPTRRPPLSLPLSIKLQVKSASRGKEFLEGQELKFVTPVRRSLRIDGAGSHYPDMLKDHDPVVSSLSELLDAEEETQFFFRKNKALPEVAELEGLSLYPPEFS
SIO_010081: CKAP2L
subclass of: SO_0000673
so part of: CKAP2L
location: join(97982..98021,99041..99107,100884..100950,101296..102404,102825..103017,103685..103840,104319..104382,104663..104810,104907..105150)
location: region:97982-105150:1
so has part: feature:97982-98021:1:exon
so has part: feature:99041-99107:1:exon
so has part: feature:100884-100950:1:exon
so has part: feature:101296-102404:1:exon
so has part: feature:102825-103017:1:exon
so has part: feature:103685-103840:1:exon
so has part: feature:104319-104382:1:exon
so has part: feature:104663-104810:1:exon
so has part: feature:104907-105150:1:exon

XP_030319859.1
type: Protein
SIO_000068: ncbiprotein

position:97982:1
position: 97982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105150:1
position: 105150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97982-98021:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:99041-99107:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:100884-100950:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:101296-102404:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:102825-103017:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:103685-103840:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:104319-104382:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:104663-104810:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:104907-105150:1:exon

CKAP2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CKAP2L
product: cytoskeleton associated protein 2 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030463998.1
SIO_010081: CKAP2L
subclass of: SO_0000673
so part of: CKAP2L
location: join(100966..102404,102825..103017,103685..103840,104319..104382,104663..104810,104907..105206)
location: region:100966-105206:1
so has part: feature:100966-102404:1:exon
so has part: feature:102825-103017:1:exon
so has part: feature:103685-103840:1:exon
so has part: feature:104319-104382:1:exon
so has part: feature:104663-104810:1:exon
so has part: feature:104907-105206:1:exon

position:100966:1
position: 100966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100966-102404:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:102825-103017:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:103685-103840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:104319-104382:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:104663-104810:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:104907-105206:1:exon

CKAP2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CKAP2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoskeleton-associated protein 2-like isoform X1
translation: MAIIQLIIFQRNLALEDPPTHPPTHTLVGAVLLFCQHLLCHCRPSPGVHRQDQAFRFAPAEVSSGLRFSLSLQVDRNKKDVSRNVVKGPQRNGKPGVKSTQHVGHTAQQKPSNTSQRAAVVQPEQPRRGTKLPLGHVPSMSHPTQPRGRLLTSTSTRPNPKRTKKPSQETVTTAAPLANSDHALPRAPSSLNQGLQDRLVCNKENLQAQGSAQPVLNRVFKSDGNNLGNKRVLAHKQSSVMMSRTVTGPKDRISSHQARQEPSQDKFRKPLPGSKSMSQKPSVKTQLLQPPWSLSASTNLLHKKMGANQEKTHPAREAGVKPQGRLPVGGLEHHSGPPQVKRNSIKPPASSRLWRPTNPTPSLKAGGTLQWQRPLEKGAVKDAKAASQVTVTQNQPGSTHSSKTPSLVSGLRSGGDRLKAEAHKPGGIQARRVPRTPSAADRKKQLQEWLASKGKTYKRPPMMLLQKQPAKLSWRSTKEKEKQEKPEQLLLEKINNIFTECLKLIEEGAQAEEVSALLSRVPQAEKFAKFWICKAKLLSQNGPFDVTGLYKAAVCAGAAPLQELREVVLDILKATDQTSGGDEAVHPLPLEPTTPCSSEKQHVAATPCPTRRPPLSLPLSIKLQVKSASRGKEFLEGQELKFVTPVRRSLRIDGAGSHYPDMLKDHDPVVSSLSELLDAEEETQFFFRKNKALPEVAELEGLSLYPPEFS
SIO_010081: CKAP2L
subclass of: SO_0000673
so part of: CKAP2L
location: join(101077..102404,102825..103017,103685..103840,104319..104382,104663..104810,104907..105150)
location: region:101077-105150:1
so has part: feature:101077-102404:1:exon
so has part: feature:102825-103017:1:exon
so has part: feature:103685-103840:1:exon
so has part: feature:104319-104382:1:exon
so has part: feature:104663-104810:1:exon
so has part: feature:104907-105150:1:exon

XP_030319858.1
type: Protein
SIO_000068: ncbiprotein

position:101077:1
position: 101077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101077-102404:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:102825-103017:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:103685-103840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:104319-104382:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:104663-104810:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:104907-105150:1:exon

LOC103525695
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103525695
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(106371..110500)
location: region:106371-110500:-1
so has part: feature:106371-110500:-1:exon
subclass of: SO_0000010

103525695
type: Gene
SIO_000068: ncbigene

position:106371:-1
position: 106371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110500:-1
position: 110500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106371-110500:-1:exon

LOC103525695
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103525695
product: cytosolic purine 5'-nucleotidase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464001.1
SIO_010081: LOC103525695
subclass of: SO_0000673
so part of: LOC103525695
location: complement(join(106371..106581,106661..106762,106879..107055,107146..107206,107293..107344,107519..107689,107776..107842,107930..108037,108122..108163,108308..108391,108506..108559,108884..109016,109224..109319,109410..109527,110165..110500))
location: region:106371-110500:-1
so has part: feature:110165-110500:-1:exon
so has part: feature:109410-109527:-1:exon
so has part: feature:109224-109319:-1:exon
so has part: feature:108884-109016:-1:exon
so has part: feature:108506-108559:-1:exon
so has part: feature:108308-108391:-1:exon
so has part: feature:108122-108163:-1:exon
so has part: feature:107930-108037:-1:exon
so has part: feature:107776-107842:-1:exon
so has part: feature:107519-107689:-1:exon
so has part: feature:107293-107344:-1:exon
so has part: feature:107146-107206:-1:exon
so has part: feature:106879-107055:-1:exon
so has part: feature:106661-106762:-1:exon
so has part: feature:106371-106581:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110165-110500:-1:exon

position:110165:-1
position: 110165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:109410-109527:-1:exon

position:109410:-1
position: 109410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109527:-1
position: 109527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:109224-109319:-1:exon

position:109224:-1
position: 109224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109319:-1
position: 109319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:108884-109016:-1:exon

position:108884:-1
position: 108884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109016:-1
position: 109016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:108506-108559:-1:exon

position:108506:-1
position: 108506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108559:-1
position: 108559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:108308-108391:-1:exon

position:108308:-1
position: 108308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108391:-1
position: 108391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:108122-108163:-1:exon

position:108122:-1
position: 108122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108163:-1
position: 108163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:107930-108037:-1:exon

position:107930:-1
position: 107930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108037:-1
position: 108037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:107776-107842:-1:exon

position:107776:-1
position: 107776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107842:-1
position: 107842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:107519-107689:-1:exon

position:107519:-1
position: 107519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107689:-1
position: 107689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:107293-107344:-1:exon

position:107293:-1
position: 107293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107344:-1
position: 107344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:107146-107206:-1:exon

position:107146:-1
position: 107146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107206:-1
position: 107206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:106879-107055:-1:exon

position:106879:-1
position: 106879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107055:-1
position: 107055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:106661-106762:-1:exon

position:106661:-1
position: 106661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106762:-1
position: 106762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:106371-106581:-1:exon

position:106581:-1
position: 106581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103525695
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103525695
product: cytosolic purine 5'-nucleotidase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030464000.1
SIO_010081: LOC103525695
subclass of: SO_0000673
so part of: LOC103525695
location: complement(join(106371..106581,106661..106762,106879..107055,107146..107206,107293..107344,107519..107689,107776..107842,107930..108037,108122..108163,108308..108391,108506..108559,108671..108764,108884..108941,109046..109137,109224..109319,109410..109527,110165..110492))
location: region:106371-110492:-1
so has part: feature:110165-110492:-1:exon
so has part: feature:109410-109527:-1:exon
so has part: feature:109224-109319:-1:exon
so has part: feature:109046-109137:-1:exon
so has part: feature:108884-108941:-1:exon
so has part: feature:108671-108764:-1:exon
so has part: feature:108506-108559:-1:exon
so has part: feature:108308-108391:-1:exon
so has part: feature:108122-108163:-1:exon
so has part: feature:107930-108037:-1:exon
so has part: feature:107776-107842:-1:exon
so has part: feature:107519-107689:-1:exon
so has part: feature:107293-107344:-1:exon
so has part: feature:107146-107206:-1:exon
so has part: feature:106879-107055:-1:exon
so has part: feature:106661-106762:-1:exon
so has part: feature:106371-106581:-1:exon

position:110492:-1
position: 110492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110165-110492:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:109410-109527:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:109224-109319:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:109046-109137:-1:exon

position:109046:-1
position: 109046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109137:-1
position: 109137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:108884-108941:-1:exon

position:108941:-1
position: 108941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:108671-108764:-1:exon

position:108671:-1
position: 108671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108764:-1
position: 108764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:108506-108559:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108308-108391:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:108122-108163:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:107930-108037:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:107776-107842:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:107519-107689:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:107293-107344:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:107146-107206:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:106879-107055:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:106661-106762:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:106371-106581:-1:exon

LOC103525695
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103525695
product: cytosolic purine 5'-nucleotidase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030464002.1
SIO_010081: LOC103525695
subclass of: SO_0000673
so part of: LOC103525695
location: complement(join(106371..106581,106661..106762,106879..107055,107146..107206,107293..107344,107519..107689,107776..107842,107930..108037,108122..108163,108308..108391,108506..108559,108671..108764,108884..108941,109046..109137,109224..109319,109410..109527,109608..109681,110165..110489))
location: region:106371-110489:-1
so has part: feature:110165-110489:-1:exon
so has part: feature:109608-109681:-1:exon
so has part: feature:109410-109527:-1:exon
so has part: feature:109224-109319:-1:exon
so has part: feature:109046-109137:-1:exon
so has part: feature:108884-108941:-1:exon
so has part: feature:108671-108764:-1:exon
so has part: feature:108506-108559:-1:exon
so has part: feature:108308-108391:-1:exon
so has part: feature:108122-108163:-1:exon
so has part: feature:107930-108037:-1:exon
so has part: feature:107776-107842:-1:exon
so has part: feature:107519-107689:-1:exon
so has part: feature:107293-107344:-1:exon
so has part: feature:107146-107206:-1:exon
so has part: feature:106879-107055:-1:exon
so has part: feature:106661-106762:-1:exon
so has part: feature:106371-106581:-1:exon

position:110489:-1
position: 110489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110165-110489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:109608-109681:-1:exon

position:109608:-1
position: 109608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109681:-1
position: 109681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:109410-109527:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:109224-109319:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:109046-109137:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108884-108941:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108671-108764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108506-108559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:108308-108391:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:108122-108163:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:107930-108037:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:107776-107842:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:107519-107689:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:107293-107344:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:107146-107206:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:106879-107055:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:106661-106762:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:106371-106581:-1:exon

LOC103525695
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103525695
product: cytosolic purine 5'-nucleotidase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030464003.1
SIO_010081: LOC103525695
subclass of: SO_0000673
so part of: LOC103525695
location: complement(join(106371..106581,106661..106762,106879..107055,107146..107206,107293..107344,107519..107689,107776..107842,107930..108037,108122..108163,108308..108391,108506..108559,108671..108764,108884..109016,109224..109319,109410..109546,109608..109682))
location: region:106371-109682:-1
so has part: feature:109608-109682:-1:exon
so has part: feature:109410-109546:-1:exon
so has part: feature:109224-109319:-1:exon
so has part: feature:108884-109016:-1:exon
so has part: feature:108671-108764:-1:exon
so has part: feature:108506-108559:-1:exon
so has part: feature:108308-108391:-1:exon
so has part: feature:108122-108163:-1:exon
so has part: feature:107930-108037:-1:exon
so has part: feature:107776-107842:-1:exon
so has part: feature:107519-107689:-1:exon
so has part: feature:107293-107344:-1:exon
so has part: feature:107146-107206:-1:exon
so has part: feature:106879-107055:-1:exon
so has part: feature:106661-106762:-1:exon
so has part: feature:106371-106581:-1:exon

position:109682:-1
position: 109682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109608-109682:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:109410-109546:-1:exon

position:109546:-1
position: 109546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:109224-109319:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:108884-109016:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108671-108764:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108506-108559:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108308-108391:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108122-108163:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:107930-108037:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:107776-107842:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:107519-107689:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:107293-107344:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:107146-107206:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:106879-107055:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:106661-106762:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:106371-106581:-1:exon

LOC103525695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103525695
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic purine 5'-nucleotidase isoform X2
translation: MCARWGFLPQFGDALGAGTEHPAPCEGALPCFGGCMGRPRPASGFPTPGPLRLLLPGGRAGAVLRSPVKAAAAGGGPRRRRWAARGSGARRRPRGRATLGRCGGTVSIVYKSPDYEELAFALLLEHLVSIGYPQEILSYKYDPTFPTRGLVFDALYGNLLKVDSHGNLLVCAHGFRFLKGPPQPLLTPTGGWCPHLPPHGPLPGRGPPLCLSCGLLHQLLQIPEGCLKEKTLENIEKYVVKDPCVPLLLSRMKEVGKVFLATNSDYNYTDAIMSYLFDFSEGKKAGTQQRPWRSYFDLIVVDTRKPLFFAEGTVLRQVDTDTGKLRVGTYTGPLQHCAIYSGGSSDLVCDLLGVKGKDILYMGDHIFGDILKSKKRQGWRTFLVVPELARELQVWTEKSELFEELRSLDLFLAELYQHLDSGSSERPDISSIKRRIQKVTHEMDMCYGKMGSLFRCGSRQTLFASQLMRYADLYAASFINFLYYPFSYLFRAPPVLMAHESTVEHGLRDSAEAGTALAPWLAQQSHPGQQVAGGIQDASGGEEEEEDGEA
SIO_010081: LOC103525695
subclass of: SO_0000673
so part of: LOC103525695
location: complement(join(106519..106581,106661..106762,106879..107055,107146..107206,107293..107344,107519..107689,107776..107842,107930..108037,108122..108163,108308..108391,108506..108559,108884..109016,109224..109319,109410..109527,110165..110489))
location: region:106519-110489:-1
so has part: feature:110165-110489:-1:exon
so has part: feature:109410-109527:-1:exon
so has part: feature:109224-109319:-1:exon
so has part: feature:108884-109016:-1:exon
so has part: feature:108506-108559:-1:exon
so has part: feature:108308-108391:-1:exon
so has part: feature:108122-108163:-1:exon
so has part: feature:107930-108037:-1:exon
so has part: feature:107776-107842:-1:exon
so has part: feature:107519-107689:-1:exon
so has part: feature:107293-107344:-1:exon
so has part: feature:107146-107206:-1:exon
so has part: feature:106879-107055:-1:exon
so has part: feature:106661-106762:-1:exon
so has part: feature:106519-106581:-1:exon

XP_030319861.1
type: Protein
SIO_000068: ncbiprotein

position:106519:-1
position: 106519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110165-110489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:109410-109527:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:109224-109319:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:108884-109016:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108506-108559:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108308-108391:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108122-108163:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:107930-108037:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:107776-107842:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:107519-107689:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:107293-107344:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:107146-107206:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:106879-107055:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:106661-106762:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:106519-106581:-1:exon

LOC103525695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103525695
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic purine 5'-nucleotidase isoform X1
translation: MCARWGFLPQFGDALGAGTEHPAPCEGALPCFGGCMGRPRPASGFPTPGPLRLLLPGGRAGAVLRSPVKAAAAGGGPRRRRWAARGSGARRRPRGRATLGRCGGTVSIVYKSPDYEELAFALLLEHLVSIGYPQEILSYKYDPTFPTRGLVFDALYGNLLKVDSHGNLLVCAHGFRFLKGPEILHYYPNKFIQRDDMKRFHILNTLFNLTEAHLYACLVDFFTNCSRYLNCDTGYKHGNLFMSFLSMFQDVREAMDHVHLSGCLKEKTLENIEKYVVKDPCVPLLLSRMKEVGKVFLATNSDYNYTDAIMSYLFDFSEGKKAGTQQRPWRSYFDLIVVDTRKPLFFAEGTVLRQVDTDTGKLRVGTYTGPLQHCAIYSGGSSDLVCDLLGVKGKDILYMGDHIFGDILKSKKRQGWRTFLVVPELARELQVWTEKSELFEELRSLDLFLAELYQHLDSGSSERPDISSIKRRIQKVTHEMDMCYGKMGSLFRCGSRQTLFASQLMRYADLYAASFINFLYYPFSYLFRAPPVLMAHESTVEHGLRDSAEAGTALAPWLAQQSHPGQQVAGGIQDASGGEEEEEDGEA
SIO_010081: LOC103525695
subclass of: SO_0000673
so part of: LOC103525695
location: complement(join(106519..106581,106661..106762,106879..107055,107146..107206,107293..107344,107519..107689,107776..107842,107930..108037,108122..108163,108308..108391,108506..108559,108671..108764,108884..108941,109046..109137,109224..109319,109410..109527,110165..110489))
location: region:106519-110489:-1
so has part: feature:110165-110489:-1:exon
so has part: feature:109410-109527:-1:exon
so has part: feature:109224-109319:-1:exon
so has part: feature:109046-109137:-1:exon
so has part: feature:108884-108941:-1:exon
so has part: feature:108671-108764:-1:exon
so has part: feature:108506-108559:-1:exon
so has part: feature:108308-108391:-1:exon
so has part: feature:108122-108163:-1:exon
so has part: feature:107930-108037:-1:exon
so has part: feature:107776-107842:-1:exon
so has part: feature:107519-107689:-1:exon
so has part: feature:107293-107344:-1:exon
so has part: feature:107146-107206:-1:exon
so has part: feature:106879-107055:-1:exon
so has part: feature:106661-106762:-1:exon
so has part: feature:106519-106581:-1:exon

XP_030319860.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110165-110489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:109410-109527:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:109224-109319:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:109046-109137:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108884-108941:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108671-108764:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108506-108559:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108308-108391:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:108122-108163:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:107930-108037:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:107776-107842:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:107519-107689:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:107293-107344:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:107146-107206:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:106879-107055:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:106661-106762:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:106519-106581:-1:exon

LOC103525695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103525695
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic purine 5'-nucleotidase isoform X3
translation: MGSEGQRGPAAAPGQGDPRALRRDCQHRIFVNRSLALEKIKCFGFDMDYTLAMYKSPDYEELAFALLLEHLVSIGYPQEILSYKYDPTFPTRGLVFDALYGNLLKVDSHGNLLVCAHGFRFLKGPEILHYYPNKFIQRDDMKRFHILNTLFNLTEAHLYACLVDFFTNCSRYLNCDTGYKHGNLFMSFLSMFQDVREAMDHVHLSGCLKEKTLENIEKYVVKDPCVPLLLSRMKEVGKVFLATNSDYNYTDAIMSYLFDFSEGKKAGTQQRPWRSYFDLIVVDTRKPLFFAEGTVLRQVDTDTGKLRVGTYTGPLQHCAIYSGGSSDLVCDLLGVKGKDILYMGDHIFGDILKSKKRQGWRTFLVVPELARELQVWTEKSELFEELRSLDLFLAELYQHLDSGSSERPDISSIKRRIQKVTHEMDMCYGKMGSLFRCGSRQTLFASQLMRYADLYAASFINFLYYPFSYLFRAPPVLMAHESTVEHGLRDSAEAGTALAPWLAQQSHPGQQVAGGIQDASGGEEEEEDGEA
SIO_010081: LOC103525695
subclass of: SO_0000673
so part of: LOC103525695
location: complement(join(106519..106581,106661..106762,106879..107055,107146..107206,107293..107344,107519..107689,107776..107842,107930..108037,108122..108163,108308..108391,108506..108559,108671..108764,108884..108941,109046..109137,109224..109319,109410..109527,109608..109681,110165..110247))
location: region:106519-110247:-1
so has part: feature:110165-110247:-1:exon
so has part: feature:109608-109681:-1:exon
so has part: feature:109410-109527:-1:exon
so has part: feature:109224-109319:-1:exon
so has part: feature:109046-109137:-1:exon
so has part: feature:108884-108941:-1:exon
so has part: feature:108671-108764:-1:exon
so has part: feature:108506-108559:-1:exon
so has part: feature:108308-108391:-1:exon
so has part: feature:108122-108163:-1:exon
so has part: feature:107930-108037:-1:exon
so has part: feature:107776-107842:-1:exon
so has part: feature:107519-107689:-1:exon
so has part: feature:107293-107344:-1:exon
so has part: feature:107146-107206:-1:exon
so has part: feature:106879-107055:-1:exon
so has part: feature:106661-106762:-1:exon
so has part: feature:106519-106581:-1:exon

XP_030319862.1
type: Protein
SIO_000068: ncbiprotein

position:110247:-1
position: 110247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110165-110247:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:109608-109681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:109410-109527:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:109224-109319:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:109046-109137:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108884-108941:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108671-108764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108506-108559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:108308-108391:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:108122-108163:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:107930-108037:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:107776-107842:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:107519-107689:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:107293-107344:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:107146-107206:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:106879-107055:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:106661-106762:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:106519-106581:-1:exon

LOC103525695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103525695
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic purine 5'-nucleotidase isoform X4
translation: MAPSLAEAHLYACLVDFFTNCSRYLNCDTGYKHGNLFMSFLSMFQDVREAMDHVHLSGCLKEKTLENIEKYVVKDPCVPLLLSRMKEVGKVFLATNSDYNYTDAIMSYLFDFSEGKKAGTQQRPWRSYFDLIVVDTRKPLFFAEGTVLRQVDTDTGKLRVGTYTGPLQHCAIYSGGSSDLVCDLLGVKGKDILYMGDHIFGDILKSKKRQGWRTFLVVPELARELQVWTEKSELFEELRSLDLFLAELYQHLDSGSSERPDISSIKRRIQKVTHEMDMCYGKMGSLFRCGSRQTLFASQLMRYADLYAASFINFLYYPFSYLFRAPPVLMAHESTVEHGLRDSAEAGTALAPWLAQQSHPGQQVAGGIQDASGGEEEEEDGEA
SIO_010081: LOC103525695
subclass of: SO_0000673
so part of: LOC103525695
location: complement(join(106519..106581,106661..106762,106879..107055,107146..107206,107293..107344,107519..107689,107776..107842,107930..108037,108122..108163,108308..108391,108506..108559,108671..108764,108884..108960))
location: region:106519-108960:-1
so has part: feature:108884-108960:-1:exon
so has part: feature:108671-108764:-1:exon
so has part: feature:108506-108559:-1:exon
so has part: feature:108308-108391:-1:exon
so has part: feature:108122-108163:-1:exon
so has part: feature:107930-108037:-1:exon
so has part: feature:107776-107842:-1:exon
so has part: feature:107519-107689:-1:exon
so has part: feature:107293-107344:-1:exon
so has part: feature:107146-107206:-1:exon
so has part: feature:106879-107055:-1:exon
so has part: feature:106661-106762:-1:exon
so has part: feature:106519-106581:-1:exon

XP_030319863.1
type: Protein
SIO_000068: ncbiprotein

position:108960:-1
position: 108960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108884-108960:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108671-108764:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108506-108559:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:108308-108391:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108122-108163:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:107930-108037:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:107776-107842:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:107519-107689:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:107293-107344:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:107146-107206:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:106879-107055:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:106661-106762:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:106519-106581:-1:exon

SLC20A1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SLC20A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(111464..120037)
location: region:111464-120037:-1
so has part: feature:111464-120037:-1:exon
subclass of: SO_0000010

103525679
type: Gene
SIO_000068: ncbigene

position:111464:-1
position: 111464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120037:-1
position: 120037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111464-120037:-1:exon

SLC20A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SLC20A1
product: solute carrier family 20 member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030463975.1
SIO_010081: SLC20A1
subclass of: SO_0000673
so part of: SLC20A1
location: complement(join(111464..112158,112594..112678,113004..113189,113284..113833,113921..114169,115660..115779,117376..117472,118882..118967,119069..119209,119306..119769,119921..120037))
location: region:111464-120037:-1
so has part: feature:119921-120037:-1:exon
so has part: feature:119306-119769:-1:exon
so has part: feature:119069-119209:-1:exon
so has part: feature:118882-118967:-1:exon
so has part: feature:117376-117472:-1:exon
so has part: feature:115660-115779:-1:exon
so has part: feature:113921-114169:-1:exon
so has part: feature:113284-113833:-1:exon
so has part: feature:113004-113189:-1:exon
so has part: feature:112594-112678:-1:exon
so has part: feature:111464-112158:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:119921-120037:-1:exon

position:119921:-1
position: 119921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:119306-119769:-1:exon

position:119306:-1
position: 119306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119769:-1
position: 119769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:119069-119209:-1:exon

position:119069:-1
position: 119069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119209:-1
position: 119209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:118882-118967:-1:exon

position:118882:-1
position: 118882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118967:-1
position: 118967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:117376-117472:-1:exon

position:117376:-1
position: 117376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117472:-1
position: 117472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:115660-115779:-1:exon

position:115660:-1
position: 115660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115779:-1
position: 115779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:113921-114169:-1:exon

position:113921:-1
position: 113921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114169:-1
position: 114169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:113284-113833:-1:exon

position:113284:-1
position: 113284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113833:-1
position: 113833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:113004-113189:-1:exon

position:113004:-1
position: 113004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113189:-1
position: 113189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:112594-112678:-1:exon

position:112594:-1
position: 112594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112678:-1
position: 112678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:111464-112158:-1:exon

position:112158:-1
position: 112158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC20A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SLC20A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent phosphate transporter 1
translation: MTTPLFNFIPNLLTTPLPTMEPTPTVPPAPMAAFLWMLILGFIIAFVLAFSVGANDVANSFGTAVGSGVVTLRQACVLASIFETVGSVLLGAKVSETIRKGLIDVEMYNSTPQLLMAGSISAMFGSAVWQLVASFLKLPISGTHCIVGATIGFSLVAKGQEGVKWSELLKIVLSWFISPLLSGIMSAVLFFLVRRFILLKADPVPNGLRALPVFYACTVGINLFSIMYTGAPLLGFDKLPLWGILLISAGSAVVCALVVWFFVCPRMKKKIEREIKSSPSESPLMEKNISPKEDQEEPKVPLGDAKGPVADEGSAAPPRAVLEERTVSFKLGDPEEAPEQERLPSLDLKETNIDSGAVPLPNGNLVQFSQAVGHQLSSGGQYQYHTVHKDSGLYKELLHKLHLAKMGDCMGDSGDKPLRRNNSYTSYTMAICGMPLDSLRAREGEEGEKLPWPAAEAKKRVRMDSYTSYCNAVADAHSAAEVDLNTAQVEMGVGNRKGSSGSLEEWQDQDKPEVSLLFQFLQILTACFGSFAHGGNDVSNAIGPLVALYLVYQTRDVSTKAATPIWLLLYGGAGICIGLWVWGRRVIQTMGKDLTPITPSSGFSIELASALTVVIASNVGLPISTTHCKVGSVVSVGWLRSRKAVDWRLFRNIFMAWFVTVPISGLISAAIMAVLKLLT
SIO_010081: SLC20A1
subclass of: SO_0000673
so part of: SLC20A1
location: complement(join(112006..112158,112594..112678,113004..113189,113284..113833,113921..114169,115660..115779,117376..117472,118882..118967,119069..119209,119306..119678))
location: region:112006-119678:-1
so has part: feature:119306-119678:-1:exon
so has part: feature:119069-119209:-1:exon
so has part: feature:118882-118967:-1:exon
so has part: feature:117376-117472:-1:exon
so has part: feature:115660-115779:-1:exon
so has part: feature:113921-114169:-1:exon
so has part: feature:113284-113833:-1:exon
so has part: feature:113004-113189:-1:exon
so has part: feature:112594-112678:-1:exon
so has part: feature:112006-112158:-1:exon

XP_030319835.1
type: Protein
SIO_000068: ncbiprotein

position:112006:-1
position: 112006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119678:-1
position: 119678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119306-119678:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:119069-119209:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:118882-118967:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:117376-117472:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:115660-115779:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:113921-114169:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:113284-113833:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:113004-113189:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:112594-112678:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:112006-112158:-1:exon

NUDCD3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: NUDCD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 133979..162356
location: region:133979-162356:1
so has part: feature:133979-162356:1:exon
subclass of: SO_0000010

103525693
type: Gene
SIO_000068: ncbigene

position:133979:1
position: 133979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162356:1
position: 162356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133979-162356:1:exon

NUDCD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NUDCD3
product: NudC domain containing 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 ESTs, 2 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030464090.1
SIO_010081: NUDCD3
subclass of: SO_0000673
so part of: NUDCD3
location: join(133979..134213,136305..136597,150197..150329,154308..154451,159810..159998,161330..162356)
location: region:133979-162356:1
so has part: feature:133979-134213:1:exon
so has part: feature:136305-136597:1:exon
so has part: feature:150197-150329:1:exon
so has part: feature:154308-154451:1:exon
so has part: feature:159810-159998:1:exon
so has part: feature:161330-162356:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:133979-134213:1:exon

position:134213:1
position: 134213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:136305-136597:1:exon

position:136305:1
position: 136305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136597:1
position: 136597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:150197-150329:1:exon

position:150197:1
position: 150197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150329:1
position: 150329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:154308-154451:1:exon

position:154308:1
position: 154308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154451:1
position: 154451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:159810-159998:1:exon

position:159810:1
position: 159810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159998:1
position: 159998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:161330-162356:1:exon

position:161330:1
position: 161330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NUDCD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NUDCD3
product: NudC domain containing 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464091.1
SIO_010081: NUDCD3
subclass of: SO_0000673
so part of: NUDCD3
location: join(133979..134213,136305..136597,150197..150329,159810..159998,161330..162356)
location: region:133979-162356:1
so has part: feature:133979-134213:1:exon
so has part: feature:136305-136597:1:exon
so has part: feature:150197-150329:1:exon
so has part: feature:159810-159998:1:exon
so has part: feature:161330-162356:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:133979-134213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:136305-136597:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150197-150329:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:159810-159998:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:161330-162356:1:exon

NUDCD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NUDCD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nudC domain-containing protein 3 isoform X1
translation: MEALTDLYDQALLGILQHVGNVEEFLRVLFGFLYRKTDFYRLLLRPGDRLGFPPGAAQTMALQAFRVFERMARQDDEKRQLELEAKLRKKEEEEEATVCAEGVELSPAAQEVEVETTVEAVPAAAAGGAAGTQDSAVAQDAAPSPGLAEPPGATAPAALPTKQEQFQTNPDSYNGAVRENYAWSQDYSDLEIKVPVPQHILKGKQVSVDISSSRIRVAVLEGSSQRILMEGKLTHKINTESSLWSLEPGKCILINLNKGDEYWWNAILEGEEQIDIDKINKERSMATVDEEEHAVLDRLTFDYHQKLQGKPQSHELKVHEMLKKGWDTEGSPFRGQKFDPSMFNISPGAVQF
SIO_010081: NUDCD3
subclass of: SO_0000673
so part of: NUDCD3
location: join(134025..134213,136305..136597,150197..150329,154308..154451,159810..159998,161330..161440)
location: region:134025-161440:1
so has part: feature:134025-134213:1:exon
so has part: feature:136305-136597:1:exon
so has part: feature:150197-150329:1:exon
so has part: feature:154308-154451:1:exon
so has part: feature:159810-159998:1:exon
so has part: feature:161330-161440:1:exon

XP_030319950.1
type: Protein
SIO_000068: ncbiprotein

position:134025:1
position: 134025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161440:1
position: 161440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134025-134213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:136305-136597:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150197-150329:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:154308-154451:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:159810-159998:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:161330-161440:1:exon

NUDCD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NUDCD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nudC domain-containing protein 3 isoform X2
translation: MEALTDLYDQALLGILQHVGNVEEFLRVLFGFLYRKTDFYRLLLRPGDRLGFPPGAAQTMALQAFRVFERMARQDDEKRQLELEAKLRKKEEEEEATVCAEGVELSPAAQEVEVETTVEAVPAAAAGGAAGTQDSAVAQDAAPSPGLAEPPGATAPAALPTKQEQFQTNPDSYNGAVRENYAWSQDYSDLEIKVPVPQHILKGKQINLNKGDEYWWNAILEGEEQIDIDKINKERSMATVDEEEHAVLDRLTFDYHQKLQGKPQSHELKVHEMLKKGWDTEGSPFRGQKFDPSMFNISPGAVQF
SIO_010081: NUDCD3
subclass of: SO_0000673
so part of: NUDCD3
location: join(134025..134213,136305..136597,150197..150329,159810..159998,161330..161440)
location: region:134025-161440:1
so has part: feature:134025-134213:1:exon
so has part: feature:136305-136597:1:exon
so has part: feature:150197-150329:1:exon
so has part: feature:159810-159998:1:exon
so has part: feature:161330-161440:1:exon

XP_030319951.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:134025-134213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:136305-136597:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150197-150329:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:159810-159998:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:161330-161440:1:exon

LOC115599561
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599561
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(309256..309579)
location: region:309256-309579:-1
so has part: feature:309256-309579:-1:exon
subclass of: SO_0000011

115599561
type: Gene
SIO_000068: ncbigene

position:309256:-1
position: 309256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309579:-1
position: 309579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309256-309579:-1:exon

LOC115599561
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599561
product: uncharacterized LOC115599561
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988495.1
SIO_010081: LOC115599561
subclass of: SO_0000673
so part of: LOC115599561
location: complement(join(309256..309299,309371..309426,309515..309579))
location: region:309256-309579:-1
so has part: feature:309515-309579:-1:exon
so has part: feature:309371-309426:-1:exon
so has part: feature:309256-309299:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:309515-309579:-1:exon

position:309515:-1
position: 309515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:309371-309426:-1:exon

position:309371:-1
position: 309371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309426:-1
position: 309426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:309256-309299:-1:exon

position:309299:-1
position: 309299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

POLB
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: POLB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 314198..322033
location: region:314198-322033:1
so has part: feature:314198-322033:1:exon
subclass of: SO_0000010

103535368
type: Gene
SIO_000068: ncbigene

position:314198:1
position: 314198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322033:1
position: 322033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314198-322033:1:exon

POLB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: POLB
product: DNA polymerase beta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 1 long SRA read, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030463991.1
SIO_010081: POLB
subclass of: SO_0000673
so part of: POLB
location: join(314198..314321,314401..314458,314549..314615,314962..315036,315509..315567,316607..316656,317076..317127,317413..317467,317556..317628,318106..318176,318476..318562,319690..319754,320284..320423,321017..321123,321922..322033)
location: region:314198-322033:1
so has part: feature:314198-314321:1:exon
so has part: feature:314401-314458:1:exon
so has part: feature:314549-314615:1:exon
so has part: feature:314962-315036:1:exon
so has part: feature:315509-315567:1:exon
so has part: feature:316607-316656:1:exon
so has part: feature:317076-317127:1:exon
so has part: feature:317413-317467:1:exon
so has part: feature:317556-317628:1:exon
so has part: feature:318106-318176:1:exon
so has part: feature:318476-318562:1:exon
so has part: feature:319690-319754:1:exon
so has part: feature:320284-320423:1:exon
so has part: feature:321017-321123:1:exon
so has part: feature:321922-322033:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:314198-314321:1:exon

position:314321:1
position: 314321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:314401-314458:1:exon

position:314401:1
position: 314401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314458:1
position: 314458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:314549-314615:1:exon

position:314549:1
position: 314549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314615:1
position: 314615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:314962-315036:1:exon

position:314962:1
position: 314962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315036:1
position: 315036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:315509-315567:1:exon

position:315509:1
position: 315509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315567:1
position: 315567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:316607-316656:1:exon

position:316607:1
position: 316607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316656:1
position: 316656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:317076-317127:1:exon

position:317076:1
position: 317076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317127:1
position: 317127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:317413-317467:1:exon

position:317413:1
position: 317413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317467:1
position: 317467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:317556-317628:1:exon

position:317556:1
position: 317556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317628:1
position: 317628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:318106-318176:1:exon

position:318106:1
position: 318106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318176:1
position: 318176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:318476-318562:1:exon

position:318476:1
position: 318476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318562:1
position: 318562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:319690-319754:1:exon

position:319690:1
position: 319690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319754:1
position: 319754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:320284-320423:1:exon

position:320284:1
position: 320284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320423:1
position: 320423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:321017-321123:1:exon

position:321017:1
position: 321017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321123:1
position: 321123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:321922-322033:1:exon

position:321922:1
position: 321922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

POLB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: POLB
product: DNA polymerase beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030463992.1
SIO_010081: POLB
subclass of: SO_0000673
so part of: POLB
location: join(314198..314321,314401..314458,314549..314615,314962..315036,315509..315567,316607..316656,317076..317127,317413..317467,317556..317628,318106..318176,318476..318562,319690..319754,320284..320423,320967..321052)
location: region:314198-321052:1
so has part: feature:314198-314321:1:exon
so has part: feature:314401-314458:1:exon
so has part: feature:314549-314615:1:exon
so has part: feature:314962-315036:1:exon
so has part: feature:315509-315567:1:exon
so has part: feature:316607-316656:1:exon
so has part: feature:317076-317127:1:exon
so has part: feature:317413-317467:1:exon
so has part: feature:317556-317628:1:exon
so has part: feature:318106-318176:1:exon
so has part: feature:318476-318562:1:exon
so has part: feature:319690-319754:1:exon
so has part: feature:320284-320423:1:exon
so has part: feature:320967-321052:1:exon

position:321052:1
position: 321052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314198-314321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:314401-314458:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:314549-314615:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:314962-315036:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:315509-315567:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:316607-316656:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:317076-317127:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:317413-317467:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:317556-317628:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:318106-318176:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:318476-318562:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:319690-319754:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:320284-320423:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:320967-321052:1:exon

position:320967:1
position: 320967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

POLB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: POLB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA polymerase beta isoform X1
translation: MSKRKAPQESPNQGITDFLTELANYERNVNRAIHKYNAYRKAASVIARYPSKIQSGAEAKKLDGVGAKIAEKIDEFLSTGKLRKLEKIRQDDTSASINFLTRVTGIGPAAARKFVEEGIKTLEDLRKNEHKLTHHQRIGLKYFEDFEKRIPREEMLQMQEIVLKEIKKLDPNYIATVCGSFRRGAESSGDMDVLLTHPSFTSESPKQPKLLRQVVEQLEKVHFVTDMLSKGDTKFMGVCQLPNKEDGTAYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEMGFTINEYTIRPLGVTGVAGEPLPVECEEDIFDYIQWKYREPKDRSE
SIO_010081: POLB
subclass of: SO_0000673
so part of: POLB
location: join(314261..314321,314401..314458,314549..314615,314962..315036,315509..315567,316607..316656,317076..317127,317413..317467,317556..317628,318106..318176,318476..318562,319690..319754,320284..320423,321017..321111)
location: region:314261-321111:1
so has part: feature:314261-314321:1:exon
so has part: feature:314401-314458:1:exon
so has part: feature:314549-314615:1:exon
so has part: feature:314962-315036:1:exon
so has part: feature:315509-315567:1:exon
so has part: feature:316607-316656:1:exon
so has part: feature:317076-317127:1:exon
so has part: feature:317413-317467:1:exon
so has part: feature:317556-317628:1:exon
so has part: feature:318106-318176:1:exon
so has part: feature:318476-318562:1:exon
so has part: feature:319690-319754:1:exon
so has part: feature:320284-320423:1:exon
so has part: feature:321017-321111:1:exon

XP_030319851.1
type: Protein
SIO_000068: ncbiprotein

position:314261:1
position: 314261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321111:1
position: 321111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314261-314321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:314401-314458:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:314549-314615:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:314962-315036:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:315509-315567:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:316607-316656:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:317076-317127:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:317413-317467:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:317556-317628:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:318106-318176:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:318476-318562:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:319690-319754:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:320284-320423:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:321017-321111:1:exon

POLB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: POLB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA polymerase beta isoform X2
translation: MSKRKAPQESPNQGITDFLTELANYERNVNRAIHKYNAYRKAASVIARYPSKIQSGAEAKKLDGVGAKIAEKIDEFLSTGKLRKLEKIRQDDTSASINFLTRVTGIGPAAARKFVEEGIKTLEDLRKNEHKLTHHQRIGLKYFEDFEKRIPREEMLQMQEIVLKEIKKLDPNYIATVCGSFRRGAESSGDMDVLLTHPSFTSESPKQPKLLRQVVEQLEKVHFVTDMLSKGDTKFMGVCQLPNKEDGTAYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEMGFTINEYTIRPLGVTGLHRPSTFQTASVIYL
SIO_010081: POLB
subclass of: SO_0000673
so part of: POLB
location: join(314261..314321,314401..314458,314549..314615,314962..315036,315509..315567,316607..316656,317076..317127,317413..317467,317556..317628,318106..318176,318476..318562,319690..319754,320284..320423,320967..321016)
location: region:314261-321016:1
so has part: feature:314261-314321:1:exon
so has part: feature:314401-314458:1:exon
so has part: feature:314549-314615:1:exon
so has part: feature:314962-315036:1:exon
so has part: feature:315509-315567:1:exon
so has part: feature:316607-316656:1:exon
so has part: feature:317076-317127:1:exon
so has part: feature:317413-317467:1:exon
so has part: feature:317556-317628:1:exon
so has part: feature:318106-318176:1:exon
so has part: feature:318476-318562:1:exon
so has part: feature:319690-319754:1:exon
so has part: feature:320284-320423:1:exon
so has part: feature:320967-321016:1:exon

XP_030319852.1
type: Protein
SIO_000068: ncbiprotein

position:321016:1
position: 321016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314261-314321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:314401-314458:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:314549-314615:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:314962-315036:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:315509-315567:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:316607-316656:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:317076-317127:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:317413-317467:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:317556-317628:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:318106-318176:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:318476-318562:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:319690-319754:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:320284-320423:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:320967-321016:1:exon

VDAC3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: VDAC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 322811..334302
location: region:322811-334302:1
so has part: feature:322811-334302:1:exon
subclass of: SO_0000010

103535357
type: Gene
SIO_000068: ncbigene

position:322811:1
position: 322811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334302:1
position: 334302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322811-334302:1:exon

VDAC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: VDAC3
product: voltage dependent anion channel 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, 2 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_030463993.1
SIO_010081: VDAC3
subclass of: SO_0000673
so part of: VDAC3
location: join(322811..322914,324424..324495,325550..325599,326716..326718,328617..328769,329905..329957,331264..331491,332383..332533,333508..333565,333806..334302)
location: region:322811-334302:1
so has part: feature:322811-322914:1:exon
so has part: feature:324424-324495:1:exon
so has part: feature:325550-325599:1:exon
so has part: feature:326716-326718:1:exon
so has part: feature:328617-328769:1:exon
so has part: feature:329905-329957:1:exon
so has part: feature:331264-331491:1:exon
so has part: feature:332383-332533:1:exon
so has part: feature:333508-333565:1:exon
so has part: feature:333806-334302:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:322811-322914:1:exon

position:322914:1
position: 322914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:324424-324495:1:exon

position:324424:1
position: 324424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324495:1
position: 324495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:325550-325599:1:exon

position:325550:1
position: 325550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325599:1
position: 325599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:326716-326718:1:exon

position:326716:1
position: 326716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326718:1
position: 326718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:328617-328769:1:exon

position:328617:1
position: 328617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328769:1
position: 328769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:329905-329957:1:exon

position:329905:1
position: 329905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329957:1
position: 329957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:331264-331491:1:exon

position:331264:1
position: 331264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331491:1
position: 331491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:332383-332533:1:exon

position:332383:1
position: 332383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332533:1
position: 332533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:333508-333565:1:exon

position:333508:1
position: 333508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333565:1
position: 333565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:333806-334302:1:exon

position:333806:1
position: 333806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VDAC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: VDAC3
product: voltage dependent anion channel 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 19 ESTs, 1 long SRA read, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030463995.1
SIO_010081: VDAC3
subclass of: SO_0000673
so part of: VDAC3
location: join(322811..322914,324424..324495,325550..325599,328617..328769,329905..329957,331264..331491,332383..332533,333508..333565,333806..334302)
location: region:322811-334302:1
so has part: feature:322811-322914:1:exon
so has part: feature:324424-324495:1:exon
so has part: feature:325550-325599:1:exon
so has part: feature:328617-328769:1:exon
so has part: feature:329905-329957:1:exon
so has part: feature:331264-331491:1:exon
so has part: feature:332383-332533:1:exon
so has part: feature:333508-333565:1:exon
so has part: feature:333806-334302:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:322811-322914:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:324424-324495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:325550-325599:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:328617-328769:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:329905-329957:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:331264-331491:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:332383-332533:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:333508-333565:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:333806-334302:1:exon

VDAC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: VDAC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent anion-selective channel protein 3 isoform X1
translation: MRARGHRDLSPGSAADPMAVPPSYSDLGKSARDVFNKGYGFGMVKLELKTKSSTGVLEFTATGSSNTDTGKASGSLETKYKVKDYGLTFTQKWNTDNTLGTEVSVEDQLAEGLKVALDTIFVPNTGKKSGKLKTSYKRDYVNLGCNIDIDLSGPTIYGWAVLGYEGWLAGYQMAFDTAKSKLSQNNFALGYKAGDFQLHTNVNDGTEFGGSIYQKVNNKVETSVNLAWTAGSNNTRFGIAAKYQMDEKTSVVAKVNNASLIGIGYTHALRPGVKLTLSGLIDGKNFSAGGHKVGLGFELEA
SIO_010081: VDAC3
subclass of: SO_0000673
so part of: VDAC3
location: join(322869..322914,324424..324495,325550..325599,326716..326718,328617..328769,329905..329957,331264..331491,332383..332533,333508..333565,333806..333897)
location: region:322869-333897:1
so has part: feature:322869-322914:1:exon
so has part: feature:324424-324495:1:exon
so has part: feature:325550-325599:1:exon
so has part: feature:326716-326718:1:exon
so has part: feature:328617-328769:1:exon
so has part: feature:329905-329957:1:exon
so has part: feature:331264-331491:1:exon
so has part: feature:332383-332533:1:exon
so has part: feature:333508-333565:1:exon
so has part: feature:333806-333897:1:exon

XP_030319853.1
type: Protein
SIO_000068: ncbiprotein

position:322869:1
position: 322869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333897:1
position: 333897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322869-322914:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:324424-324495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:325550-325599:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:326716-326718:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:328617-328769:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:329905-329957:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:331264-331491:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:332383-332533:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:333508-333565:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:333806-333897:1:exon

VDAC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: VDAC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent anion-selective channel protein 3 isoform X2
translation: MRARGHRDLSPGSAADPMAVPPSYSDLGKSARDVFNKGYGFGMVKLELKTKSSTGVEFTATGSSNTDTGKASGSLETKYKVKDYGLTFTQKWNTDNTLGTEVSVEDQLAEGLKVALDTIFVPNTGKKSGKLKTSYKRDYVNLGCNIDIDLSGPTIYGWAVLGYEGWLAGYQMAFDTAKSKLSQNNFALGYKAGDFQLHTNVNDGTEFGGSIYQKVNNKVETSVNLAWTAGSNNTRFGIAAKYQMDEKTSVVAKVNNASLIGIGYTHALRPGVKLTLSGLIDGKNFSAGGHKVGLGFELEA
SIO_010081: VDAC3
subclass of: SO_0000673
so part of: VDAC3
location: join(322869..322914,324424..324495,325550..325599,328617..328769,329905..329957,331264..331491,332383..332533,333508..333565,333806..333897)
location: region:322869-333897:1
so has part: feature:322869-322914:1:exon
so has part: feature:324424-324495:1:exon
so has part: feature:325550-325599:1:exon
so has part: feature:328617-328769:1:exon
so has part: feature:329905-329957:1:exon
so has part: feature:331264-331491:1:exon
so has part: feature:332383-332533:1:exon
so has part: feature:333508-333565:1:exon
so has part: feature:333806-333897:1:exon

XP_030319855.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:322869-322914:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:324424-324495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:325550-325599:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:328617-328769:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:329905-329957:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:331264-331491:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:332383-332533:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:333508-333565:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:333806-333897:1:exon

VDAC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: VDAC3
product: voltage dependent anion channel 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, 1 long SRA read, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030463996.1
SIO_010081: VDAC3
subclass of: SO_0000673
so part of: VDAC3
location: join(323430..323453,324424..324495,325550..325599,326716..326718,328617..328769,329905..329957,331264..331491,332383..332533,333508..333565,333806..334302)
location: region:323430-334302:1
so has part: feature:323430-323453:1:exon
so has part: feature:324424-324495:1:exon
so has part: feature:325550-325599:1:exon
so has part: feature:326716-326718:1:exon
so has part: feature:328617-328769:1:exon
so has part: feature:329905-329957:1:exon
so has part: feature:331264-331491:1:exon
so has part: feature:332383-332533:1:exon
so has part: feature:333508-333565:1:exon
so has part: feature:333806-334302:1:exon

position:323430:1
position: 323430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323430-323453:1:exon

position:323453:1
position: 323453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:324424-324495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:325550-325599:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:326716-326718:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:328617-328769:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:329905-329957:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:331264-331491:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:332383-332533:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:333508-333565:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:333806-334302:1:exon

VDAC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: VDAC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent anion-selective channel protein 3 isoform X3
translation: MAVPPSYSDLGKSARDVFNKGYGFGMVKLELKTKSSTGVLEFTATGSSNTDTGKASGSLETKYKVKDYGLTFTQKWNTDNTLGTEVSVEDQLAEGLKVALDTIFVPNTGKKSGKLKTSYKRDYVNLGCNIDIDLSGPTIYGWAVLGYEGWLAGYQMAFDTAKSKLSQNNFALGYKAGDFQLHTNVNDGTEFGGSIYQKVNNKVETSVNLAWTAGSNNTRFGIAAKYQMDEKTSVVAKVNNASLIGIGYTHALRPGVKLTLSGLIDGKNFSAGGHKVGLGFELEA
SIO_010081: VDAC3
subclass of: SO_0000673
so part of: VDAC3
location: join(324429..324495,325550..325599,326716..326718,328617..328769,329905..329957,331264..331491,332383..332533,333508..333565,333806..333897)
location: region:324429-333897:1
so has part: feature:324429-324495:1:exon
so has part: feature:325550-325599:1:exon
so has part: feature:326716-326718:1:exon
so has part: feature:328617-328769:1:exon
so has part: feature:329905-329957:1:exon
so has part: feature:331264-331491:1:exon
so has part: feature:332383-332533:1:exon
so has part: feature:333508-333565:1:exon
so has part: feature:333806-333897:1:exon

XP_030319856.1
type: Protein
SIO_000068: ncbiprotein

position:324429:1
position: 324429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324429-324495:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:325550-325599:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:326716-326718:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:328617-328769:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:329905-329957:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:331264-331491:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:332383-332533:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:333508-333565:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:333806-333897:1:exon

VDAC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: VDAC3
product: voltage dependent anion channel 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030463997.1
SIO_010081: VDAC3
subclass of: SO_0000673
so part of: VDAC3
location: join(325570..325599,326818..326883,328617..328769,329905..329957,331264..331491,332383..332533,333508..333565,333806..334302)
location: region:325570-334302:1
so has part: feature:325570-325599:1:exon
so has part: feature:326818-326883:1:exon
so has part: feature:328617-328769:1:exon
so has part: feature:329905-329957:1:exon
so has part: feature:331264-331491:1:exon
so has part: feature:332383-332533:1:exon
so has part: feature:333508-333565:1:exon
so has part: feature:333806-334302:1:exon

position:325570:1
position: 325570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325570-325599:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:326818-326883:1:exon

position:326818:1
position: 326818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326883:1
position: 326883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:328617-328769:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:329905-329957:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:331264-331491:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:332383-332533:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:333508-333565:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:333806-334302:1:exon

VDAC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: VDAC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent anion-selective channel protein 3 isoform X4
translation: MIHEFTATGSSNTDTGKASGSLETKYKVKDYGLTFTQKWNTDNTLGTEVSVEDQLAEGLKVALDTIFVPNTGKKSGKLKTSYKRDYVNLGCNIDIDLSGPTIYGWAVLGYEGWLAGYQMAFDTAKSKLSQNNFALGYKAGDFQLHTNVNDGTEFGGSIYQKVNNKVETSVNLAWTAGSNNTRFGIAAKYQMDEKTSVVAKVNNASLIGIGYTHALRPGVKLTLSGLIDGKNFSAGGHKVGLGFELEA
SIO_010081: VDAC3
subclass of: SO_0000673
so part of: VDAC3
location: join(326875..326883,328617..328769,329905..329957,331264..331491,332383..332533,333508..333565,333806..333897)
location: region:326875-333897:1
so has part: feature:326875-326883:1:exon
so has part: feature:328617-328769:1:exon
so has part: feature:329905-329957:1:exon
so has part: feature:331264-331491:1:exon
so has part: feature:332383-332533:1:exon
so has part: feature:333508-333565:1:exon
so has part: feature:333806-333897:1:exon

XP_030319857.1
type: Protein
SIO_000068: ncbiprotein

position:326875:1
position: 326875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326875-326883:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328617-328769:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:329905-329957:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:331264-331491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:332383-332533:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:333508-333565:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:333806-333897:1:exon

IKBKB
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: IKBKB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(334150..345891)
location: region:334150-345891:-1
so has part: feature:334150-345891:-1:exon
subclass of: SO_0000010

103535369
type: Gene
SIO_000068: ncbigene

position:334150:-1
position: 334150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345891:-1
position: 345891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334150-345891:-1:exon

IKBKB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: IKBKB
product: inhibitor of nuclear factor kappa B kinase subunit beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 2 long SRA reads, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030463988.1
SIO_010081: IKBKB
subclass of: SO_0000673
so part of: IKBKB
location: complement(join(334150..335124,335688..335778,336482..336609,336775..336922,337128..337227,337739..337788,337990..338099,339151..339212,339325..339476,339742..339865,340204..340318,340515..340709,341187..341316,341594..341701,342007..342131,342493..342582,343053..343141,343917..343986,344755..344872,345568..345662,345740..345891))
location: region:334150-345891:-1
so has part: feature:345740-345891:-1:exon
so has part: feature:345568-345662:-1:exon
so has part: feature:344755-344872:-1:exon
so has part: feature:343917-343986:-1:exon
so has part: feature:343053-343141:-1:exon
so has part: feature:342493-342582:-1:exon
so has part: feature:342007-342131:-1:exon
so has part: feature:341594-341701:-1:exon
so has part: feature:341187-341316:-1:exon
so has part: feature:340515-340709:-1:exon
so has part: feature:340204-340318:-1:exon
so has part: feature:339742-339865:-1:exon
so has part: feature:339325-339476:-1:exon
so has part: feature:339151-339212:-1:exon
so has part: feature:337990-338099:-1:exon
so has part: feature:337739-337788:-1:exon
so has part: feature:337128-337227:-1:exon
so has part: feature:336775-336922:-1:exon
so has part: feature:336482-336609:-1:exon
so has part: feature:335688-335778:-1:exon
so has part: feature:334150-335124:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:345740-345891:-1:exon

position:345740:-1
position: 345740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:345568-345662:-1:exon

position:345568:-1
position: 345568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345662:-1
position: 345662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:344755-344872:-1:exon

position:344755:-1
position: 344755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344872:-1
position: 344872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:343917-343986:-1:exon

position:343917:-1
position: 343917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343986:-1
position: 343986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:343053-343141:-1:exon

position:343053:-1
position: 343053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343141:-1
position: 343141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:342493-342582:-1:exon

position:342493:-1
position: 342493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342582:-1
position: 342582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:342007-342131:-1:exon

position:342007:-1
position: 342007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342131:-1
position: 342131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:341594-341701:-1:exon

position:341594:-1
position: 341594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341701:-1
position: 341701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:341187-341316:-1:exon

position:341187:-1
position: 341187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341316:-1
position: 341316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:340515-340709:-1:exon

position:340515:-1
position: 340515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340709:-1
position: 340709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:340204-340318:-1:exon

position:340204:-1
position: 340204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340318:-1
position: 340318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:339742-339865:-1:exon

position:339742:-1
position: 339742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339865:-1
position: 339865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:339325-339476:-1:exon

position:339325:-1
position: 339325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339476:-1
position: 339476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:339151-339212:-1:exon

position:339151:-1
position: 339151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339212:-1
position: 339212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:337990-338099:-1:exon

position:337990:-1
position: 337990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338099:-1
position: 338099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:337739-337788:-1:exon

position:337739:-1
position: 337739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337788:-1
position: 337788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:337128-337227:-1:exon

position:337128:-1
position: 337128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337227:-1
position: 337227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:336775-336922:-1:exon

position:336775:-1
position: 336775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336922:-1
position: 336922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:336482-336609:-1:exon

position:336482:-1
position: 336482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336609:-1
position: 336609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:335688-335778:-1:exon

position:335688:-1
position: 335688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335778:-1
position: 335778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:334150-335124:-1:exon

position:335124:-1
position: 335124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IKBKB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: IKBKB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inhibitor of nuclear factor kappa-B kinase subunit beta
translation: MSRPPALQAQTCGPWEMKERLGTGGFGNVIRWHNKETGEQVAIKQCRQELSPRNRDRWALEIQIMKRLNHPNVVAARDVPEGMQKLAPNDLPLLAMEYCQGGDLRKYLNQLENCCGLREESILILLSDIASALRYLHENRIIHRDLKPENIVLQQGEQRLIHKIIDLGYAKELDQGSLCTSFVGTLQYLAPELLEQQKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHTKVRQKSELDIVVSEDLSGEVKFSSSLPYPNNLNSILAARLEKWLQLMLMWHPWRRGTDPTYGPNGCFKALDDILNLKLLHVLNMVTGTVHTYPVTEEDTLQTVKARIQSDTGIPEQDQELLQEAGLELLSQKLATTHLADSRVNDTAAADTDLLFLFDNQKVAYEAQVALRPHPESVDCILQDPKRNLHFFQLRKVWGQIWHTIRMLKEDCNRLQQGQRAAMMNLLRYNSTLSKMKNSMASLSQQLKAKLDFFKTSIQIDLEKYKEQIEFGITSEKLLFAWKEMEQAVELCGREDDVDELVKKMMALQTDIVDLQRSPLGRKQGGTLEDLEEQARELYRRLREKPRDQRTSGDSQEIVRLLLQAIQTFEKKVRVIYAQLSKTVVCKQKALELFPRVEKVMTLMNEDEETVVRLQEKRQKELWNLLKIACSKVRGPVTGSPESVNTSRLGSPGQLLLQVPSGTYSFSESLMKSEELVLESQQLCSQLENVIHDTMKEQEQSFMALDWSWLQAEETNSPEQTQM
SIO_010081: IKBKB
subclass of: SO_0000673
so part of: IKBKB
location: complement(join(335062..335124,335688..335778,336482..336609,336775..336922,337128..337227,337739..337788,337990..338099,339151..339212,339325..339476,339742..339865,340204..340318,340515..340709,341187..341316,341594..341701,342007..342131,342493..342582,343053..343141,343917..343986,344755..344872,345568..345662,345740..345844))
location: region:335062-345844:-1
so has part: feature:345740-345844:-1:exon
so has part: feature:345568-345662:-1:exon
so has part: feature:344755-344872:-1:exon
so has part: feature:343917-343986:-1:exon
so has part: feature:343053-343141:-1:exon
so has part: feature:342493-342582:-1:exon
so has part: feature:342007-342131:-1:exon
so has part: feature:341594-341701:-1:exon
so has part: feature:341187-341316:-1:exon
so has part: feature:340515-340709:-1:exon
so has part: feature:340204-340318:-1:exon
so has part: feature:339742-339865:-1:exon
so has part: feature:339325-339476:-1:exon
so has part: feature:339151-339212:-1:exon
so has part: feature:337990-338099:-1:exon
so has part: feature:337739-337788:-1:exon
so has part: feature:337128-337227:-1:exon
so has part: feature:336775-336922:-1:exon
so has part: feature:336482-336609:-1:exon
so has part: feature:335688-335778:-1:exon
so has part: feature:335062-335124:-1:exon

XP_030319848.1
type: Protein
SIO_000068: ncbiprotein

position:335062:-1
position: 335062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345844:-1
position: 345844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345740-345844:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:345568-345662:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:344755-344872:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:343917-343986:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:343053-343141:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:342493-342582:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:342007-342131:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:341594-341701:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:341187-341316:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:340515-340709:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:340204-340318:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:339742-339865:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:339325-339476:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:339151-339212:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:337990-338099:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:337739-337788:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:337128-337227:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:336775-336922:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:336482-336609:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:335688-335778:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:335062-335124:-1:exon

PLAT
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PLAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 347509..365502
location: region:347509-365502:1
so has part: feature:347509-365502:1:exon
subclass of: SO_0000010

103535358
type: Gene
SIO_000068: ncbigene

position:347509:1
position: 347509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365502:1
position: 365502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347509-365502:1:exon

PLAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PLAT
product: plasminogen activator, tissue type, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 5 long SRA reads, 27 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030463989.1
SIO_010081: PLAT
subclass of: SO_0000673
so part of: PLAT
location: join(347509..347882,352548..352648,353592..353631,354043..354174,354602..354715,355068..355242,355760..355851,356106..356280,356724..356809,357217..357412,357900..358036,358126..358266,360008..360156,360853..365502)
location: region:347509-365502:1
so has part: feature:347509-347882:1:exon
so has part: feature:352548-352648:1:exon
so has part: feature:353592-353631:1:exon
so has part: feature:354043-354174:1:exon
so has part: feature:354602-354715:1:exon
so has part: feature:355068-355242:1:exon
so has part: feature:355760-355851:1:exon
so has part: feature:356106-356280:1:exon
so has part: feature:356724-356809:1:exon
so has part: feature:357217-357412:1:exon
so has part: feature:357900-358036:1:exon
so has part: feature:358126-358266:1:exon
so has part: feature:360008-360156:1:exon
so has part: feature:360853-365502:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:347509-347882:1:exon

position:347882:1
position: 347882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:352548-352648:1:exon

position:352548:1
position: 352548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352648:1
position: 352648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:353592-353631:1:exon

position:353592:1
position: 353592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353631:1
position: 353631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:354043-354174:1:exon

position:354043:1
position: 354043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354174:1
position: 354174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:354602-354715:1:exon

position:354602:1
position: 354602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354715:1
position: 354715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:355068-355242:1:exon

position:355068:1
position: 355068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:355242:1
position: 355242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:355760-355851:1:exon

position:355760:1
position: 355760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:355851:1
position: 355851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:356106-356280:1:exon

position:356106:1
position: 356106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356280:1
position: 356280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:356724-356809:1:exon

position:356724:1
position: 356724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356809:1
position: 356809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:357217-357412:1:exon

position:357217:1
position: 357217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357412:1
position: 357412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:357900-358036:1:exon

position:357900:1
position: 357900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358036:1
position: 358036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:358126-358266:1:exon

position:358126:1
position: 358126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358266:1
position: 358266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:360008-360156:1:exon

position:360008:1
position: 360008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360156:1
position: 360156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:360853-365502:1:exon

position:360853:1
position: 360853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PLAT
product: plasminogen activator, tissue type, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 1 long SRA read, 23 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030463990.1
SIO_010081: PLAT
subclass of: SO_0000673
so part of: PLAT
location: join(347509..347882,352548..352648,354043..354174,354602..354715,355068..355242,355760..355851,356106..356280,356724..356809,357217..357412,357900..358036,358126..358266,360008..360156,360853..362677)
location: region:347509-362677:1
so has part: feature:347509-347882:1:exon
so has part: feature:352548-352648:1:exon
so has part: feature:354043-354174:1:exon
so has part: feature:354602-354715:1:exon
so has part: feature:355068-355242:1:exon
so has part: feature:355760-355851:1:exon
so has part: feature:356106-356280:1:exon
so has part: feature:356724-356809:1:exon
so has part: feature:357217-357412:1:exon
so has part: feature:357900-358036:1:exon
so has part: feature:358126-358266:1:exon
so has part: feature:360008-360156:1:exon
so has part: feature:360853-362677:1:exon

position:362677:1
position: 362677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347509-347882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:352548-352648:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:354043-354174:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:354602-354715:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:355068-355242:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:355760-355851:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:356106-356280:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:356724-356809:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:357217-357412:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:357900-358036:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:358126-358266:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:360008-360156:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:360853-362677:1:exon

PLAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PLAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tissue-type plasminogen activator isoform X1
translation: MEGKFACFLLVLGGIVTAQCQGLHLRFKRGARSRAICTDNSSGEIYQHRGTWLRLSGSRIEYCRCDSGRSRCHAVPIRACTRNKCYNGGQCSQAYYSPQLFICQCHPRFSGKQCEIDTEVKCYKGSGVTYRGMWSMTESGTECLNWNSNGLMDRMYSGRREDAAELGLGNHNYCRNPDEDSRPWCYIYKGGKYTWEHCSVPSCSKVGNINCKSGRGTDYRGSHSVTSSGATCLRWNSQILVNKFYTAWRRDAYQLGLGSHNFCRNPDNDSKPWCHVLKENRLTWEYCNVPTCSTCGLRHRSARQYRVKGGSYADISAHPWQAAIFVKYRRTPGEHFLCGGILISSCWVLSAAHCFEERFSTDQLKIVLGRTSRATAEENEQKFQVKKYTVHQQFDSENFNNDIALLQLNSEAEDCAIETDTVRAACLPTPELQLPDWTECEISGYGKNEEFSPFYSDYLKEGHVRLFPASRCTSQHLDNRTVTDNMLCAGDTRHLDDACKGDSGGPLVCMKDQRMYLIGIISWGIGCGRKDIPGVYTNVNRYLDWIQDNMKP
SIO_010081: PLAT
subclass of: SO_0000673
so part of: PLAT
location: join(352586..352648,353592..353631,354043..354174,354602..354715,355068..355242,355760..355851,356106..356280,356724..356809,357217..357412,357900..358036,358126..358266,360008..360156,360853..361011)
location: region:352586-361011:1
so has part: feature:352586-352648:1:exon
so has part: feature:353592-353631:1:exon
so has part: feature:354043-354174:1:exon
so has part: feature:354602-354715:1:exon
so has part: feature:355068-355242:1:exon
so has part: feature:355760-355851:1:exon
so has part: feature:356106-356280:1:exon
so has part: feature:356724-356809:1:exon
so has part: feature:357217-357412:1:exon
so has part: feature:357900-358036:1:exon
so has part: feature:358126-358266:1:exon
so has part: feature:360008-360156:1:exon
so has part: feature:360853-361011:1:exon

XP_030319849.1
type: Protein
SIO_000068: ncbiprotein

position:352586:1
position: 352586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361011:1
position: 361011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352586-352648:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:353592-353631:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:354043-354174:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:354602-354715:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:355068-355242:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:355760-355851:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:356106-356280:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:356724-356809:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:357217-357412:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:357900-358036:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:358126-358266:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:360008-360156:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:360853-361011:1:exon

PLAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PLAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tissue-type plasminogen activator isoform X2
translation: MFPPGAGRNRDCSVPAICTDNSSGEIYQHRGTWLRLSGSRIEYCRCDSGRSRCHAVPIRACTRNKCYNGGQCSQAYYSPQLFICQCHPRFSGKQCEIDTEVKCYKGSGVTYRGMWSMTESGTECLNWNSNGLMDRMYSGRREDAAELGLGNHNYCRNPDEDSRPWCYIYKGGKYTWEHCSVPSCSKVGNINCKSGRGTDYRGSHSVTSSGATCLRWNSQILVNKFYTAWRRDAYQLGLGSHNFCRNPDNDSKPWCHVLKENRLTWEYCNVPTCSTCGLRHRSARQYRVKGGSYADISAHPWQAAIFVKYRRTPGEHFLCGGILISSCWVLSAAHCFEERFSTDQLKIVLGRTSRATAEENEQKFQVKKYTVHQQFDSENFNNDIALLQLNSEAEDCAIETDTVRAACLPTPELQLPDWTECEISGYGKNEEFSPFYSDYLKEGHVRLFPASRCTSQHLDNRTVTDNMLCAGDTRHLDDACKGDSGGPLVCMKDQRMYLIGIISWGIGCGRKDIPGVYTNVNRYLDWIQDNMKP
SIO_010081: PLAT
subclass of: SO_0000673
so part of: PLAT
location: join(352603..352648,354043..354174,354602..354715,355068..355242,355760..355851,356106..356280,356724..356809,357217..357412,357900..358036,358126..358266,360008..360156,360853..361011)
location: region:352603-361011:1
so has part: feature:352603-352648:1:exon
so has part: feature:354043-354174:1:exon
so has part: feature:354602-354715:1:exon
so has part: feature:355068-355242:1:exon
so has part: feature:355760-355851:1:exon
so has part: feature:356106-356280:1:exon
so has part: feature:356724-356809:1:exon
so has part: feature:357217-357412:1:exon
so has part: feature:357900-358036:1:exon
so has part: feature:358126-358266:1:exon
so has part: feature:360008-360156:1:exon
so has part: feature:360853-361011:1:exon

XP_030319850.1
type: Protein
SIO_000068: ncbiprotein

position:352603:1
position: 352603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352603-352648:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:354043-354174:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:354602-354715:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:355068-355242:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:355760-355851:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:356106-356280:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:356724-356809:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:357217-357412:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:357900-358036:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:358126-358266:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:360008-360156:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:360853-361011:1:exon

AP3M2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: AP3M2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(362675..370248)
location: region:362675-370248:-1
so has part: feature:362675-370248:-1:exon
subclass of: SO_0000010

103535370
type: Gene
SIO_000068: ncbigene

position:362675:-1
position: 362675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370248:-1
position: 370248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362675-370248:-1:exon

AP3M2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: AP3M2
product: adaptor related protein complex 3 subunit mu 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 10 long SRA reads, 17 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_008501419.2
SIO_010081: AP3M2
subclass of: SO_0000673
so part of: AP3M2
location: complement(join(362675..364321,364736..364880,365276..365483,366166..366299,366767..366852,367355..367492,368000..368171,369888..370248))
location: region:362675-370248:-1
so has part: feature:369888-370248:-1:exon
so has part: feature:368000-368171:-1:exon
so has part: feature:367355-367492:-1:exon
so has part: feature:366767-366852:-1:exon
so has part: feature:366166-366299:-1:exon
so has part: feature:365276-365483:-1:exon
so has part: feature:364736-364880:-1:exon
so has part: feature:362675-364321:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:369888-370248:-1:exon

position:369888:-1
position: 369888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:368000-368171:-1:exon

position:368000:-1
position: 368000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368171:-1
position: 368171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:367355-367492:-1:exon

position:367355:-1
position: 367355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367492:-1
position: 367492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:366767-366852:-1:exon

position:366767:-1
position: 366767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366852:-1
position: 366852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:366166-366299:-1:exon

position:366166:-1
position: 366166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366299:-1
position: 366299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:365276-365483:-1:exon

position:365276:-1
position: 365276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365483:-1
position: 365483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:364736-364880:-1:exon

position:364736:-1
position: 364736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364880:-1
position: 364880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:362675-364321:-1:exon

position:364321:-1
position: 364321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AP3M2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: AP3M2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-3 complex subunit mu-2
translation: MIHSLFLINASGDIFLEKHWKSVVSRSVCDYFFEAQERASEAENVPPVIPTPHHYLLSVYRHKIFFVAVIQSEVPPLFVIEFLHRVVDTFQDYFGVCSEVMIKDNVVVVYEVLEEMLDNGFPLATESNILKELIKPPTILRTVVNTITGSTNVGDQLPTGQLSVVPWRRTGVKYTNNEAYFDVIEEIDAIIDKSGSTITAEIQGVIDACVKLTGMPDLTLSFMNPRLLDDVSFHPCVRFKRWESERILSFIPPDGNFRLLSYHVSAQNLVAIPVYVKHNISFRDSSSQGRFEITVGPKQTMGKTVEGVMVTSQMPKGVLNMTLTPSQGTHIFDPVTKLLSWDVGKINPQKLPSLKGTMSLQAGTSKPDENPTINLQFKIQQLAISGLKVNRLDMYGEKYKPFKGIKYMTKAGKFQVRT
SIO_010081: AP3M2
subclass of: SO_0000673
so part of: AP3M2
location: complement(join(364221..364321,364736..364880,365276..365483,366166..366299,366767..366852,367355..367492,368000..368171,369888..370160))
location: region:364221-370160:-1
so has part: feature:369888-370160:-1:exon
so has part: feature:368000-368171:-1:exon
so has part: feature:367355-367492:-1:exon
so has part: feature:366767-366852:-1:exon
so has part: feature:366166-366299:-1:exon
so has part: feature:365276-365483:-1:exon
so has part: feature:364736-364880:-1:exon
so has part: feature:364221-364321:-1:exon

XP_008499641.2
type: Protein
SIO_000068: ncbiprotein

position:364221:-1
position: 364221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370160:-1
position: 370160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369888-370160:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:368000-368171:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:367355-367492:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:366767-366852:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:366166-366299:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:365276-365483:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:364736-364880:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:364221-364321:-1:exon

KAT6A
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: KAT6A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 374558..407366
location: region:374558-407366:1
so has part: feature:374558-407366:1:exon
subclass of: SO_0000010

103535359
type: Gene
SIO_000068: ncbigene

position:374558:1
position: 374558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407366:1
position: 407366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374558-407366:1:exon

KAT6A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: KAT6A
product: lysine acetyltransferase 6A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 31 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030463918.1
SIO_010081: KAT6A
subclass of: SO_0000673
so part of: KAT6A
location: join(374558..374643,376369..376418,376529..377299,389341..389449,389923..390038,390292..390373,391106..391241,392917..393227,394376..394494,394856..394971,395507..395648,396094..396255,397138..397231,398000..398231,398777..398987,399506..400195,400672..400987,402245..407366)
location: region:374558-407366:1
so has part: feature:374558-374643:1:exon
so has part: feature:376369-376418:1:exon
so has part: feature:376529-377299:1:exon
so has part: feature:389341-389449:1:exon
so has part: feature:389923-390038:1:exon
so has part: feature:390292-390373:1:exon
so has part: feature:391106-391241:1:exon
so has part: feature:392917-393227:1:exon
so has part: feature:394376-394494:1:exon
so has part: feature:394856-394971:1:exon
so has part: feature:395507-395648:1:exon
so has part: feature:396094-396255:1:exon
so has part: feature:397138-397231:1:exon
so has part: feature:398000-398231:1:exon
so has part: feature:398777-398987:1:exon
so has part: feature:399506-400195:1:exon
so has part: feature:400672-400987:1:exon
so has part: feature:402245-407366:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:374558-374643:1:exon

position:374643:1
position: 374643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:376369-376418:1:exon

position:376369:1
position: 376369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376418:1
position: 376418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:376529-377299:1:exon

position:376529:1
position: 376529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377299:1
position: 377299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:389341-389449:1:exon

position:389341:1
position: 389341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389449:1
position: 389449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:389923-390038:1:exon

position:389923:1
position: 389923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390038:1
position: 390038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:390292-390373:1:exon

position:390292:1
position: 390292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390373:1
position: 390373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:391106-391241:1:exon

position:391106:1
position: 391106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391241:1
position: 391241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:392917-393227:1:exon

position:392917:1
position: 392917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393227:1
position: 393227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:394376-394494:1:exon

position:394376:1
position: 394376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394494:1
position: 394494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:394856-394971:1:exon

position:394856:1
position: 394856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394971:1
position: 394971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:395507-395648:1:exon

position:395507:1
position: 395507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395648:1
position: 395648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:396094-396255:1:exon

position:396094:1
position: 396094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396255:1
position: 396255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:397138-397231:1:exon

position:397138:1
position: 397138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397231:1
position: 397231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:398000-398231:1:exon

position:398000:1
position: 398000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398231:1
position: 398231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:398777-398987:1:exon

position:398777:1
position: 398777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398987:1
position: 398987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:399506-400195:1:exon

position:399506:1
position: 399506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400195:1
position: 400195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:400672-400987:1:exon

position:400672:1
position: 400672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400987:1
position: 400987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:402245-407366:1:exon

position:402245:1
position: 402245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KAT6A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: KAT6A
product: lysine acetyltransferase 6A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 30 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030463919.1
SIO_010081: KAT6A
subclass of: SO_0000673
so part of: KAT6A
location: join(375323..375480,376369..376418,376529..377299,389341..389449,389923..390038,390292..390373,391106..391241,392917..393227,394376..394494,394856..394971,395507..395648,396094..396255,397138..397231,398000..398231,398777..398987,399506..400195,400672..400987,402245..407366)
location: region:375323-407366:1
so has part: feature:375323-375480:1:exon
so has part: feature:376369-376418:1:exon
so has part: feature:376529-377299:1:exon
so has part: feature:389341-389449:1:exon
so has part: feature:389923-390038:1:exon
so has part: feature:390292-390373:1:exon
so has part: feature:391106-391241:1:exon
so has part: feature:392917-393227:1:exon
so has part: feature:394376-394494:1:exon
so has part: feature:394856-394971:1:exon
so has part: feature:395507-395648:1:exon
so has part: feature:396094-396255:1:exon
so has part: feature:397138-397231:1:exon
so has part: feature:398000-398231:1:exon
so has part: feature:398777-398987:1:exon
so has part: feature:399506-400195:1:exon
so has part: feature:400672-400987:1:exon
so has part: feature:402245-407366:1:exon

position:375323:1
position: 375323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375323-375480:1:exon

position:375480:1
position: 375480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:376369-376418:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:376529-377299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389341-389449:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:389923-390038:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:390292-390373:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:391106-391241:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:392917-393227:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:394376-394494:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:394856-394971:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:395507-395648:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:396094-396255:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:397138-397231:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:398000-398231:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:398777-398987:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:399506-400195:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:400672-400987:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:402245-407366:1:exon

KAT6A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: KAT6A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone acetyltransferase KAT6A
translation: MVKLANPLYTEWILEAIKKVKKQKQRPSEERICNAVSSSHGLDRKTVLEQLELSVKDGTILKVSNKGLNSYKDPDNPGRIALPKPRNHGKLDGKPNVDWNKLIKRAIEGLAESSGSSLKNIERFLKGQKDVSALFGGSAASIFHQQLRLAVKRAVGHGRLLKDGPLYQLNTKATTNADGKESFESLSCLPPVCLLPHEKDKPVAEPIPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECKTCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRPRKKGRKLLHKKAAQIKRRYANPIGRPKNRLKNQNTTSKDSFSKVRTGPGRGRKRKIALSSQSPSSEGYLEQTDVLDLCRDGSTTLKFNKKTKGLIDGLTKFFTPSPDGRKARGEVVDYSQQYRIRKKGTRKSSTSEWPTDNQDGWDGKQENEERFFGSQDVLTEKDMELFRDIQEQALQKVGVIGPPDPQVRCPSVIEFGKYEIQTWYSSPYPQEYSRLPKLYLCEFCLKYMKSRTILQQHMKKCGWFHPPANEIYRKNNISVFEVDGNVSTIYCQNLCLLAKLFLDHKTLYYDVEPFLFYVLTQNDVKGCHLVGYFSKEKHCQQKYNVSCIMILPQYQRKGYGRFLIDFSYLLSKREGQAGSPEKPLSDLGRLSYMAYWKSVILECLYHQRDKQLSIKKLSKLTGICPQDITSTLHHLRMLDFRSDQFVIIRREKLIQEHMAKLRTNVRPIDVDAECLRWTPVIVSNSVVSEDEEEETEDGDNEEQQQQKEKDTEPSMVKSVSWEKKEQEPYSPTESEKKPDIVTPANSARPNKHIFPLEGLPANSQTSRRGRWNRKGKKLREPFCEEPVLPMEDKTAVPSGRCSECEEKSAASRGRCSDCEEKSAALQGRCDECEEKSPAPRGRYVEDEEKSAVSQGQYDKGEKSPVPRRRYSEGMERWKGQLKKNTEPLKCRFPEDCERLPRRYSDSDRALLRCFSESSEEEEDEPVSPRSSSPPVLTKPTLKRKKPILHRKRRVRKRKHHNSSVVTETISETTEVLDEPFEDSDSERPMPRLEPTFEIEEEEEEEEDEEEENELLPSGYFRHLAPPDTLRHRSSSKRKSKDEEESDDTNGNPTLKPLSMLRKCEAKDSSLEPDTSTPMKKKKGWPKGKSRKPVHWKKRPGRKPGFKLNREKVPPSSQDDGIDTEVAGSKPGRKPKVSDKEESVEQKEEQPLTEERKEEDVNMEADEVGEGEEEDVASSEVRADSPVDSNSSPAPEVKEPEIEEEVEEKPRVLEEQRQSEEEQQELDEPEHDHEEEEVTVVRNQNEDHDADDEDDGHLDSVKKKELEDQPVREGVKEEPQVQECFLETSIPSSREDAKEKDEAEADSEEDQASNETSVASEHVPGSEDDHEEEQSNKEGLIELKEEEEIPHSELDLETVQAVQSLTQEESNEHDVAYQDCEETLAACQTLQSYTQTEEDPQISMVEDCQASEHNSPISSVQSHPSQSVRSVSSPNVPALESSYTQISPEQGSLSAPSMQNMETSPMMDVPSVSDHSQQVVDSGFSDLGSIESTTENYENPSSYDSTMGGSICGNNSSQSSCSYGGLSSSSSLTQNSCVVTQQMANIGSSCSMMQQNSVQPAANCSIKSPQSCVVERPPSNQQPTTQPQQQQPQSQQPQPPPPPQQQPPLSQCSMNNSFTPAPMIMEIPESGSTGNISIYERIPGDFGAGSYSQPSATFSLAKLQQLTNTIMDPHAMPYSHSPAVTSYATSVSLSNTGLAQLAPSHPLAGTPQAQATMTPPPNLASTTMNLTSPLLQCNMSATNIGIPHTQRLQGQMPVKGHISIRSKSAPLPSATAHQQQLYGRSPPAVAMQAGPRALAVQRGMNMGVNLMPTTPYNVNSMNMNTLNAMNSYRMTQPMMNSSYHSNPAYMNQTAQYPMQMQMGMMGSQAYTQQPMQPNPHGNMMYTGPSHHSYMNAAGVPKQSL…
SIO_010081: KAT6A
subclass of: SO_0000673
so part of: KAT6A
location: join(376697..377299,389341..389449,389923..390038,390292..390373,391106..391241,392917..393227,394376..394494,394856..394971,395507..395648,396094..396255,397138..397231,398000..398231,398777..398987,399506..400195,400672..400987,402245..404829)
location: region:376697-404829:1
so has part: feature:376697-377299:1:exon
so has part: feature:389341-389449:1:exon
so has part: feature:389923-390038:1:exon
so has part: feature:390292-390373:1:exon
so has part: feature:391106-391241:1:exon
so has part: feature:392917-393227:1:exon
so has part: feature:394376-394494:1:exon
so has part: feature:394856-394971:1:exon
so has part: feature:395507-395648:1:exon
so has part: feature:396094-396255:1:exon
so has part: feature:397138-397231:1:exon
so has part: feature:398000-398231:1:exon
so has part: feature:398777-398987:1:exon
so has part: feature:399506-400195:1:exon
so has part: feature:400672-400987:1:exon
so has part: feature:402245-404829:1:exon

XP_030319778.1
type: Protein
SIO_000068: ncbiprotein

position:376697:1
position: 376697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404829:1
position: 404829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376697-377299:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:389341-389449:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:389923-390038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:390292-390373:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:391106-391241:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:392917-393227:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:394376-394494:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:394856-394971:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:395507-395648:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:396094-396255:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:397138-397231:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:398000-398231:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:398777-398987:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:399506-400195:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:400672-400987:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:402245-404829:1:exon

KAT6A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: KAT6A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone acetyltransferase KAT6A
translation: MVKLANPLYTEWILEAIKKVKKQKQRPSEERICNAVSSSHGLDRKTVLEQLELSVKDGTILKVSNKGLNSYKDPDNPGRIALPKPRNHGKLDGKPNVDWNKLIKRAIEGLAESSGSSLKNIERFLKGQKDVSALFGGSAASIFHQQLRLAVKRAVGHGRLLKDGPLYQLNTKATTNADGKESFESLSCLPPVCLLPHEKDKPVAEPIPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECKTCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRPRKKGRKLLHKKAAQIKRRYANPIGRPKNRLKNQNTTSKDSFSKVRTGPGRGRKRKIALSSQSPSSEGYLEQTDVLDLCRDGSTTLKFNKKTKGLIDGLTKFFTPSPDGRKARGEVVDYSQQYRIRKKGTRKSSTSEWPTDNQDGWDGKQENEERFFGSQDVLTEKDMELFRDIQEQALQKVGVIGPPDPQVRCPSVIEFGKYEIQTWYSSPYPQEYSRLPKLYLCEFCLKYMKSRTILQQHMKKCGWFHPPANEIYRKNNISVFEVDGNVSTIYCQNLCLLAKLFLDHKTLYYDVEPFLFYVLTQNDVKGCHLVGYFSKEKHCQQKYNVSCIMILPQYQRKGYGRFLIDFSYLLSKREGQAGSPEKPLSDLGRLSYMAYWKSVILECLYHQRDKQLSIKKLSKLTGICPQDITSTLHHLRMLDFRSDQFVIIRREKLIQEHMAKLRTNVRPIDVDAECLRWTPVIVSNSVVSEDEEEETEDGDNEEQQQQKEKDTEPSMVKSVSWEKKEQEPYSPTESEKKPDIVTPANSARPNKHIFPLEGLPANSQTSRRGRWNRKGKKLREPFCEEPVLPMEDKTAVPSGRCSECEEKSAASRGRCSDCEEKSAALQGRCDECEEKSPAPRGRYVEDEEKSAVSQGQYDKGEKSPVPRRRYSEGMERWKGQLKKNTEPLKCRFPEDCERLPRRYSDSDRALLRCFSESSEEEEDEPVSPRSSSPPVLTKPTLKRKKPILHRKRRVRKRKHHNSSVVTETISETTEVLDEPFEDSDSERPMPRLEPTFEIEEEEEEEEDEEEENELLPSGYFRHLAPPDTLRHRSSSKRKSKDEEESDDTNGNPTLKPLSMLRKCEAKDSSLEPDTSTPMKKKKGWPKGKSRKPVHWKKRPGRKPGFKLNREKVPPSSQDDGIDTEVAGSKPGRKPKVSDKEESVEQKEEQPLTEERKEEDVNMEADEVGEGEEEDVASSEVRADSPVDSNSSPAPEVKEPEIEEEVEEKPRVLEEQRQSEEEQQELDEPEHDHEEEEVTVVRNQNEDHDADDEDDGHLDSVKKKELEDQPVREGVKEEPQVQECFLETSIPSSREDAKEKDEAEADSEEDQASNETSVASEHVPGSEDDHEEEQSNKEGLIELKEEEEIPHSELDLETVQAVQSLTQEESNEHDVAYQDCEETLAACQTLQSYTQTEEDPQISMVEDCQASEHNSPISSVQSHPSQSVRSVSSPNVPALESSYTQISPEQGSLSAPSMQNMETSPMMDVPSVSDHSQQVVDSGFSDLGSIESTTENYENPSSYDSTMGGSICGNNSSQSSCSYGGLSSSSSLTQNSCVVTQQMANIGSSCSMMQQNSVQPAANCSIKSPQSCVVERPPSNQQPTTQPQQQQPQSQQPQPPPPPQQQPPLSQCSMNNSFTPAPMIMEIPESGSTGNISIYERIPGDFGAGSYSQPSATFSLAKLQQLTNTIMDPHAMPYSHSPAVTSYATSVSLSNTGLAQLAPSHPLAGTPQAQATMTPPPNLASTTMNLTSPLLQCNMSATNIGIPHTQRLQGQMPVKGHISIRSKSAPLPSATAHQQQLYGRSPPAVAMQAGPRALAVQRGMNMGVNLMPTTPYNVNSMNMNTLNAMNSYRMTQPMMNSSYHSNPAYMNQTAQYPMQMQMGMMGSQAYTQQPMQPNPHGNMMYTGPSHHSYMNAAGVPKQSL…
SIO_010081: KAT6A
subclass of: SO_0000673
so part of: KAT6A
location: join(376697..377299,389341..389449,389923..390038,390292..390373,391106..391241,392917..393227,394376..394494,394856..394971,395507..395648,396094..396255,397138..397231,398000..398231,398777..398987,399506..400195,400672..400987,402245..404829)
location: region:376697-404829:1
so has part: feature:376697-377299:1:exon
so has part: feature:389341-389449:1:exon
so has part: feature:389923-390038:1:exon
so has part: feature:390292-390373:1:exon
so has part: feature:391106-391241:1:exon
so has part: feature:392917-393227:1:exon
so has part: feature:394376-394494:1:exon
so has part: feature:394856-394971:1:exon
so has part: feature:395507-395648:1:exon
so has part: feature:396094-396255:1:exon
so has part: feature:397138-397231:1:exon
so has part: feature:398000-398231:1:exon
so has part: feature:398777-398987:1:exon
so has part: feature:399506-400195:1:exon
so has part: feature:400672-400987:1:exon
so has part: feature:402245-404829:1:exon

XP_030319779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:376697-377299:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:389341-389449:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:389923-390038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:390292-390373:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:391106-391241:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:392917-393227:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:394376-394494:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:394856-394971:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:395507-395648:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:396094-396255:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:397138-397231:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:398000-398231:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:398777-398987:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:399506-400195:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:400672-400987:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:402245-404829:1:exon

ANK1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ANK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 435217..468589
location: region:435217-468589:1
so has part: feature:435217-468589:1:exon
subclass of: SO_0000010

103535371
type: Gene
SIO_000068: ncbigene

position:435217:1
position: 435217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468589:1
position: 468589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435217-468589:1:exon

ANK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ANK1
product: ankyrin 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464184.1
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
location: join(435217..435292,442718..442819,445538..445636,446687..446785,447339..447437,447550..447735,447874..447972,448529..448627,449042..449140,449542..449739,449831..449929,450086..450184,450415..450513,450694..450891,451053..451151,451245..451343,452308..452505,452699..452797,453198..453296,453539..453637,453742..453834,454029..454101,454470..454493,455368..455470,455696..455843,456070..456167,456258..456482,456761..456915,457016..457227,457337..457541,457716..457812,458177..458405,458543..458668,458769..458888,459104..459188,459426..459500,459765..459896,460062..460208,461793..462345,462986..463244,464439..464522,464787..464954,465228..465349,466385..468589)
location: region:435217-468589:1
so has part: feature:435217-435292:1:exon
so has part: feature:442718-442819:1:exon
so has part: feature:445538-445636:1:exon
so has part: feature:446687-446785:1:exon
so has part: feature:447339-447437:1:exon
so has part: feature:447550-447735:1:exon
so has part: feature:447874-447972:1:exon
so has part: feature:448529-448627:1:exon
so has part: feature:449042-449140:1:exon
so has part: feature:449542-449739:1:exon
so has part: feature:449831-449929:1:exon
so has part: feature:450086-450184:1:exon
so has part: feature:450415-450513:1:exon
so has part: feature:450694-450891:1:exon
so has part: feature:451053-451151:1:exon
so has part: feature:451245-451343:1:exon
so has part: feature:452308-452505:1:exon
so has part: feature:452699-452797:1:exon
so has part: feature:453198-453296:1:exon
so has part: feature:453539-453637:1:exon
so has part: feature:453742-453834:1:exon
so has part: feature:454029-454101:1:exon
so has part: feature:454470-454493:1:exon
so has part: feature:455368-455470:1:exon
so has part: feature:455696-455843:1:exon
so has part: feature:456070-456167:1:exon
so has part: feature:456258-456482:1:exon
so has part: feature:456761-456915:1:exon
so has part: feature:457016-457227:1:exon
so has part: feature:457337-457541:1:exon
so has part: feature:457716-457812:1:exon
so has part: feature:458177-458405:1:exon
so has part: feature:458543-458668:1:exon
so has part: feature:458769-458888:1:exon
so has part: feature:459104-459188:1:exon
so has part: feature:459426-459500:1:exon
so has part: feature:459765-459896:1:exon
so has part: feature:460062-460208:1:exon
so has part: feature:461793-462345:1:exon
so has part: feature:462986-463244:1:exon
so has part: feature:464439-464522:1:exon
so has part: feature:464787-464954:1:exon
so has part: feature:465228-465349:1:exon
so has part: feature:466385-468589:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:435217-435292:1:exon

position:435292:1
position: 435292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:442718-442819:1:exon

position:442718:1
position: 442718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442819:1
position: 442819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:445538-445636:1:exon

position:445538:1
position: 445538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445636:1
position: 445636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:446687-446785:1:exon

position:446687:1
position: 446687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446785:1
position: 446785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:447339-447437:1:exon

position:447339:1
position: 447339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447437:1
position: 447437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:447550-447735:1:exon

position:447550:1
position: 447550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447735:1
position: 447735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:447874-447972:1:exon

position:447874:1
position: 447874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447972:1
position: 447972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:448529-448627:1:exon

position:448529:1
position: 448529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448627:1
position: 448627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:449042-449140:1:exon

position:449042:1
position: 449042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449140:1
position: 449140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:449542-449739:1:exon

position:449542:1
position: 449542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449739:1
position: 449739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:449831-449929:1:exon

position:449831:1
position: 449831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449929:1
position: 449929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:450086-450184:1:exon

position:450086:1
position: 450086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450184:1
position: 450184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:450415-450513:1:exon

position:450415:1
position: 450415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450513:1
position: 450513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:450694-450891:1:exon

position:450694:1
position: 450694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450891:1
position: 450891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:451053-451151:1:exon

position:451053:1
position: 451053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451151:1
position: 451151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:451245-451343:1:exon

position:451245:1
position: 451245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451343:1
position: 451343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:452308-452505:1:exon

position:452308:1
position: 452308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452505:1
position: 452505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:452699-452797:1:exon

position:452699:1
position: 452699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452797:1
position: 452797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:453198-453296:1:exon

position:453198:1
position: 453198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453296:1
position: 453296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:453539-453637:1:exon

position:453539:1
position: 453539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453637:1
position: 453637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:453742-453834:1:exon

position:453742:1
position: 453742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453834:1
position: 453834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:454029-454101:1:exon

position:454029:1
position: 454029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454101:1
position: 454101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:454470-454493:1:exon

position:454470:1
position: 454470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454493:1
position: 454493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:455368-455470:1:exon

position:455368:1
position: 455368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455470:1
position: 455470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:455696-455843:1:exon

position:455696:1
position: 455696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455843:1
position: 455843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:456070-456167:1:exon

position:456070:1
position: 456070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456167:1
position: 456167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:456258-456482:1:exon

position:456258:1
position: 456258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456482:1
position: 456482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:456761-456915:1:exon

position:456761:1
position: 456761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456915:1
position: 456915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:457016-457227:1:exon

position:457016:1
position: 457016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457227:1
position: 457227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:457337-457541:1:exon

position:457337:1
position: 457337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457541:1
position: 457541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:457716-457812:1:exon

position:457716:1
position: 457716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457812:1
position: 457812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:458177-458405:1:exon

position:458177:1
position: 458177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458405:1
position: 458405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:458543-458668:1:exon

position:458543:1
position: 458543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458668:1
position: 458668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:458769-458888:1:exon

position:458769:1
position: 458769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458888:1
position: 458888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:459104-459188:1:exon

position:459104:1
position: 459104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459188:1
position: 459188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:459426-459500:1:exon

position:459426:1
position: 459426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459500:1
position: 459500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:459765-459896:1:exon

position:459765:1
position: 459765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459896:1
position: 459896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:460062-460208:1:exon

position:460062:1
position: 460062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460208:1
position: 460208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:461793-462345:1:exon

position:461793:1
position: 461793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462345:1
position: 462345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:462986-463244:1:exon

position:462986:1
position: 462986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463244:1
position: 463244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:464439-464522:1:exon

position:464439:1
position: 464439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464522:1
position: 464522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:464787-464954:1:exon

position:464787:1
position: 464787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464954:1
position: 464954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:465228-465349:1:exon

position:465228:1
position: 465228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465349:1
position: 465349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:466385-468589:1:exon

position:466385:1
position: 466385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ANK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ANK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin-1 isoform X4
translation: MLEQESTVQADAATSFLRAARSGNLDKALDHLRNGVDINTCNQNGLNALHLASKEGHVKMVVELLHKEIVLETTTKKGNTALHIAALAGQQDVVRELVNYGANVNAQSQKGFTPLYMAAQENHLEVVKFLLENGANQNVATEDGFTPLAVALQQGHENVVAHLINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNADVLSKTGFTPLHIAAHYENLSVAQLLLNRGASVNFTPQNGITPLHIASRRGNIIMVRLLLDRGAQIETKTKDELTPLHCAARNGHVRIAEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLLLQYSAEIDDITLDHLTPLHVAAHCGHHRVAKLLVEKGAKPNSRALNGFTPLHIACKKNHIRVMELLLKTGASIDAVTESGLTPLHVAAFMGHLPIVKTLLQRGASPNVSNVKVETPLHMAARAGHMDVAKYLLQNKAKANAKAKDDQTPLHCAARIGHTGMVKLLLENNANPNLATTAGHTPLHITAREGHVDTALALLEKGASQTCMTKKGFTPLHVAAKYGKVDVAELLLAHEAHPNAAGKNGLTPLHVAVHHNNLEIVKLLLPKGSSPHSSAWNGYSPLHIAAKQNQMEVASSLLQYGASANAESVQGVTPLHLASQEGHTDMVALLFSKQANGDLGNKSGLTPLHLVAQEGHVLVADVLVKHGVTVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYTPLHQAAQQGHTDVVTLLLKHGASPNEISTNGTTPLAIAKRLGYISVTDVLKIVTEETDIPSVGDKHRMSFPETVDEILDVSEDEGTAHVTVMEEELAAPKPRTPDSRDQERKREMLEFVTTTMLEQMVESPAVLQVPCVPPETVVTRAEETEQVGPVETEAEQVSLLHAPSVSPQEPSKEFDEDSLIPSSPATETSDNISPVASPVHTGFLVSFMVDARGGSMRGSRHHGLRVVIPPRACAAPTRITCRLVKPQKLPAPPPLAEEEGLASRIIALGPAGAQFLSPVIVEIPHFASYGRGDRELVVLRSENGSIWKEHRNRYEESYMDQLLSGMDEELESLEDLEKKRVCRIITTDFPLYFVVMSRICQDCDMIGPEGGCLKSTLVPMVQATFPDTAVTKKVRLALQAQPVPDELVTKLLGNQATFSPIVTVEPRRRKFHRPIGLRIPLPPSWKDNPRDSGEGDTTSLRLLCSVIGGTAQAQWEDITGTTKLIYENECANFTTNVSARFWLADCPRTAEAVHFATMLYKELTAVPYMAKFVVFAKMNDAREGRLRCYCMTDDKVDKTLEQHENFTEVARSRDIEVVEGMPLHVELSGNLVPVKKGTQPRSFLFQSFRENRLAIPIKVRDSSREASGSLSFLRKAMKYEDLQHVLCHLNITIPPCTKGSGSEERRRTLTPLSLRERYSILSETSFGSLSSTDKGDQKMVDVAEQLGLSWAELARELQFGVEDINRIRVENPNSLLEQSMALLNLWVSREGKNVKMESLYMALRNIDRGEIVNTLEGSGRHSRSLKSSWRYTERDYSLSPSQMNGYASLQDELLSPASLHYTLPSPLRADQYWNEVAIMDAIPMAATEQDALMEMSDMQVWSSGLTPSLVTAEDSSLECSKAEDSDATSEGRFPGQLLADAHGPDHMGSMDLVEDDTVDSDAMNGLIDLLEQEEGQRPEGKMPASDRQPGNGEQDPESEVSFVSVQQKVQARITSSPTVSHVVEKSGDRLRDWNAEGSFISCLQDLTAGSWQEGVTRRLLPTHTTASGAQGQEQEQVLVPTVELMRISSAEDSDWQPQHPTGSWQEEADSRFFGQGNEVLHLPGEQVTEEQFTDDHGNIITKKVIRKVVRQLSPGDMRDRQEQEELILEGSLQDPQDLEAEDDHFMKYSILHRDGLGAKEEMQVRVPKPEVSGGRMGAQIVKRASLKRGKQ
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
location: join(435266..435292,442718..442819,445538..445636,446687..446785,447339..447437,447550..447735,447874..447972,448529..448627,449042..449140,449542..449739,449831..449929,450086..450184,450415..450513,450694..450891,451053..451151,451245..451343,452308..452505,452699..452797,453198..453296,453539..453637,453742..453834,454029..454101,454470..454493,455368..455470,455696..455843,456070..456167,456258..456482,456761..456915,457016..457227,457337..457541,457716..457812,458177..458405,458543..458668,458769..458888,459104..459188,459426..459500,459765..459896,460062..460208,461793..462345,462986..463244,464439..464522,464787..464954,465228..465326)
location: region:435266-465326:1
so has part: feature:435266-435292:1:exon
so has part: feature:442718-442819:1:exon
so has part: feature:445538-445636:1:exon
so has part: feature:446687-446785:1:exon
so has part: feature:447339-447437:1:exon
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so has part: feature:447874-447972:1:exon
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so has part: feature:449042-449140:1:exon
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so has part: feature:450694-450891:1:exon
so has part: feature:451053-451151:1:exon
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so has part: feature:455368-455470:1:exon
so has part: feature:455696-455843:1:exon
so has part: feature:456070-456167:1:exon
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so has part: feature:456761-456915:1:exon
so has part: feature:457016-457227:1:exon
so has part: feature:457337-457541:1:exon
so has part: feature:457716-457812:1:exon
so has part: feature:458177-458405:1:exon
so has part: feature:458543-458668:1:exon
so has part: feature:458769-458888:1:exon
so has part: feature:459104-459188:1:exon
so has part: feature:459426-459500:1:exon
so has part: feature:459765-459896:1:exon
so has part: feature:460062-460208:1:exon
so has part: feature:461793-462345:1:exon
so has part: feature:462986-463244:1:exon
so has part: feature:464439-464522:1:exon
so has part: feature:464787-464954:1:exon
so has part: feature:465228-465326:1:exon

XP_030320044.1
type: Protein
SIO_000068: ncbiprotein

position:435266:1
position: 435266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465326:1
position: 465326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435266-435292:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:442718-442819:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:445538-445636:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:446687-446785:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:447339-447437:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:447550-447735:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:447874-447972:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448529-448627:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:449042-449140:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:449542-449739:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:449831-449929:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:450086-450184:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:450415-450513:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:450694-450891:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:451053-451151:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:451245-451343:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:452308-452505:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:452699-452797:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:453198-453296:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:453539-453637:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:453742-453834:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:454029-454101:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:454470-454493:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:455368-455470:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:455696-455843:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:456070-456167:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:456258-456482:1:exon

urn:…
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SIO_000628: feature:456761-456915:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:457016-457227:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:457337-457541:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:457716-457812:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:458177-458405:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:458543-458668:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:458769-458888:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:459104-459188:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:459426-459500:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:459765-459896:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:460062-460208:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:461793-462345:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:462986-463244:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:464439-464522:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:464787-464954:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:465228-465326:1:exon

ANK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ANK1
product: ankyrin 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030464185.1
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
location: join(435743..435965,442718..442819,445538..445636,446687..446785,447339..447437,447550..447735,447874..447972,448529..448627,449042..449140,449542..449739,449831..449929,450086..450184,450415..450513,450694..450891,451053..451151,451245..451343,452308..452505,452699..452797,453198..453296,453539..453637,453742..453834,454029..454101,454470..454493,455368..455470,455696..455843,456070..456167,456258..456482,456761..456915,457016..457227,457337..457541,457716..457812,458177..458405,458543..458668,458769..458888,459104..459188,459426..459500,459765..459896,460062..460208,461793..462345,462986..463244,464439..464522,464787..464954,465228..465349,466385..468589)
location: region:435743-468589:1
so has part: feature:435743-435965:1:exon
so has part: feature:442718-442819:1:exon
so has part: feature:445538-445636:1:exon
so has part: feature:446687-446785:1:exon
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so has part: feature:447874-447972:1:exon
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so has part: feature:458769-458888:1:exon
so has part: feature:459104-459188:1:exon
so has part: feature:459426-459500:1:exon
so has part: feature:459765-459896:1:exon
so has part: feature:460062-460208:1:exon
so has part: feature:461793-462345:1:exon
so has part: feature:462986-463244:1:exon
so has part: feature:464439-464522:1:exon
so has part: feature:464787-464954:1:exon
so has part: feature:465228-465349:1:exon
so has part: feature:466385-468589:1:exon

position:435743:1
position: 435743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435743-435965:1:exon

position:435965:1
position: 435965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:442718-442819:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:445538-445636:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:446687-446785:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:447339-447437:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:447550-447735:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:447874-447972:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448529-448627:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:449042-449140:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:449542-449739:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:449831-449929:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:450086-450184:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:450415-450513:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:450694-450891:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:451053-451151:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:451245-451343:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:452308-452505:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:452699-452797:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:453198-453296:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:453539-453637:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:453742-453834:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:454029-454101:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:454470-454493:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:455368-455470:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:455696-455843:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:456070-456167:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:456258-456482:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:456761-456915:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:457016-457227:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:457337-457541:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:457716-457812:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:458177-458405:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:458543-458668:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:458769-458888:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:459104-459188:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:459426-459500:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:459765-459896:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:460062-460208:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:461793-462345:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:462986-463244:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:464439-464522:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:464787-464954:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:465228-465349:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:466385-468589:1:exon

ANK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ANK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin-1 isoform X5
translation: MPCLRYLRADAATSFLRAARSGNLDKALDHLRNGVDINTCNQNGLNALHLASKEGHVKMVVELLHKEIVLETTTKKGNTALHIAALAGQQDVVRELVNYGANVNAQSQKGFTPLYMAAQENHLEVVKFLLENGANQNVATEDGFTPLAVALQQGHENVVAHLINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNADVLSKTGFTPLHIAAHYENLSVAQLLLNRGASVNFTPQNGITPLHIASRRGNIIMVRLLLDRGAQIETKTKDELTPLHCAARNGHVRIAEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLLLQYSAEIDDITLDHLTPLHVAAHCGHHRVAKLLVEKGAKPNSRALNGFTPLHIACKKNHIRVMELLLKTGASIDAVTESGLTPLHVAAFMGHLPIVKTLLQRGASPNVSNVKVETPLHMAARAGHMDVAKYLLQNKAKANAKAKDDQTPLHCAARIGHTGMVKLLLENNANPNLATTAGHTPLHITAREGHVDTALALLEKGASQTCMTKKGFTPLHVAAKYGKVDVAELLLAHEAHPNAAGKNGLTPLHVAVHHNNLEIVKLLLPKGSSPHSSAWNGYSPLHIAAKQNQMEVASSLLQYGASANAESVQGVTPLHLASQEGHTDMVALLFSKQANGDLGNKSGLTPLHLVAQEGHVLVADVLVKHGVTVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYTPLHQAAQQGHTDVVTLLLKHGASPNEISTNGTTPLAIAKRLGYISVTDVLKIVTEETDIPSVGDKHRMSFPETVDEILDVSEDEGTAHVTVMEEELAAPKPRTPDSRDQERKREMLEFVTTTMLEQMVESPAVLQVPCVPPETVVTRAEETEQVGPVETEAEQVSLLHAPSVSPQEPSKEFDEDSLIPSSPATETSDNISPVASPVHTGFLVSFMVDARGGSMRGSRHHGLRVVIPPRACAAPTRITCRLVKPQKLPAPPPLAEEEGLASRIIALGPAGAQFLSPVIVEIPHFASYGRGDRELVVLRSENGSIWKEHRNRYEESYMDQLLSGMDEELESLEDLEKKRVCRIITTDFPLYFVVMSRICQDCDMIGPEGGCLKSTLVPMVQATFPDTAVTKKVRLALQAQPVPDELVTKLLGNQATFSPIVTVEPRRRKFHRPIGLRIPLPPSWKDNPRDSGEGDTTSLRLLCSVIGGTAQAQWEDITGTTKLIYENECANFTTNVSARFWLADCPRTAEAVHFATMLYKELTAVPYMAKFVVFAKMNDAREGRLRCYCMTDDKVDKTLEQHENFTEVARSRDIEVVEGMPLHVELSGNLVPVKKGTQPRSFLFQSFRENRLAIPIKVRDSSREASGSLSFLRKAMKYEDLQHVLCHLNITIPPCTKGSGSEERRRTLTPLSLRERYSILSETSFGSLSSTDKGDQKMVDVAEQLGLSWAELARELQFGVEDINRIRVENPNSLLEQSMALLNLWVSREGKNVKMESLYMALRNIDRGEIVNTLEGSGRHSRSLKSSWRYTERDYSLSPSQMNGYASLQDELLSPASLHYTLPSPLRADQYWNEVAIMDAIPMAATEQDALMEMSDMQVWSSGLTPSLVTAEDSSLECSKAEDSDATSEGRFPGQLLADAHGPDHMGSMDLVEDDTVDSDAMNGLIDLLEQEEGQRPEGKMPASDRQPGNGEQDPESEVSFVSVQQKVQARITSSPTVSHVVEKSGDRLRDWNAEGSFISCLQDLTAGSWQEGVTRRLLPTHTTASGAQGQEQEQVLVPTVELMRISSAEDSDWQPQHPTGSWQEEADSRFFGQGNEVLHLPGEQVTEEQFTDDHGNIITKKVIRKVVRQLSPGDMRDRQEQEELILEGSLQDPQDLEAEDDHFMKYSILHRDGLGAKEEMQVRVPKPEVSGGRMGAQIVKRASLKRGKQ
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
location: join(435942..435965,442718..442819,445538..445636,446687..446785,447339..447437,447550..447735,447874..447972,448529..448627,449042..449140,449542..449739,449831..449929,450086..450184,450415..450513,450694..450891,451053..451151,451245..451343,452308..452505,452699..452797,453198..453296,453539..453637,453742..453834,454029..454101,454470..454493,455368..455470,455696..455843,456070..456167,456258..456482,456761..456915,457016..457227,457337..457541,457716..457812,458177..458405,458543..458668,458769..458888,459104..459188,459426..459500,459765..459896,460062..460208,461793..462345,462986..463244,464439..464522,464787..464954,465228..465326)
location: region:435942-465326:1
so has part: feature:435942-435965:1:exon
so has part: feature:442718-442819:1:exon
so has part: feature:445538-445636:1:exon
so has part: feature:446687-446785:1:exon
so has part: feature:447339-447437:1:exon
so has part: feature:447550-447735:1:exon
so has part: feature:447874-447972:1:exon
so has part: feature:448529-448627:1:exon
so has part: feature:449042-449140:1:exon
so has part: feature:449542-449739:1:exon
so has part: feature:449831-449929:1:exon
so has part: feature:450086-450184:1:exon
so has part: feature:450415-450513:1:exon
so has part: feature:450694-450891:1:exon
so has part: feature:451053-451151:1:exon
so has part: feature:451245-451343:1:exon
so has part: feature:452308-452505:1:exon
so has part: feature:452699-452797:1:exon
so has part: feature:453198-453296:1:exon
so has part: feature:453539-453637:1:exon
so has part: feature:453742-453834:1:exon
so has part: feature:454029-454101:1:exon
so has part: feature:454470-454493:1:exon
so has part: feature:455368-455470:1:exon
so has part: feature:455696-455843:1:exon
so has part: feature:456070-456167:1:exon
so has part: feature:456258-456482:1:exon
so has part: feature:456761-456915:1:exon
so has part: feature:457016-457227:1:exon
so has part: feature:457337-457541:1:exon
so has part: feature:457716-457812:1:exon
so has part: feature:458177-458405:1:exon
so has part: feature:458543-458668:1:exon
so has part: feature:458769-458888:1:exon
so has part: feature:459104-459188:1:exon
so has part: feature:459426-459500:1:exon
so has part: feature:459765-459896:1:exon
so has part: feature:460062-460208:1:exon
so has part: feature:461793-462345:1:exon
so has part: feature:462986-463244:1:exon
so has part: feature:464439-464522:1:exon
so has part: feature:464787-464954:1:exon
so has part: feature:465228-465326:1:exon

XP_030320045.1
type: Protein
SIO_000068: ncbiprotein

position:435942:1
position: 435942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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ANK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ANK1
product: ankyrin 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030464187.1
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
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position:436009:1
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position:463032:1
position: 463032
reference: sequence
type: ForwardStrandPosition
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ANK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ANK1
product: ankyrin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030464181.1
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
location: join(436011..437012,442718..442819,445538..445636,446687..446785,447339..447437,447550..447735,447874..447972,448529..448627,449042..449140,449542..449739,449831..449929,450086..450184,450415..450513,450694..450891,451053..451151,451245..451343,452308..452505,452699..452797,453198..453296,453539..453637,453742..453834,454029..454101,454470..454493,455368..455470,455696..455843,456070..456167,456258..456482,456761..456915,457016..457227,457337..457541,457716..457812,458177..458405,458543..458668,458769..458888,459104..459188,459426..459500,459765..459896,460062..460208,461793..462345,462986..463244,464439..464522,464787..464954,465228..465349,466385..468589)
location: region:436011-468589:1
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position:436011:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
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ANK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ANK1
product: ankyrin 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030464186.1
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
location: join(436011..437012,442718..442819,445538..445636,446687..446785,447339..447437,447550..447735,447874..447972,448529..448627,449042..449140,449542..449739,449831..449929,450086..450184,450415..450513,450694..450891,451053..451151,451245..451343,452308..452505,452699..452797,453198..453296,453539..453637,453742..453834,454029..454101,454470..454493,455368..455470,455696..455843,456070..456167,456258..456482,456761..456915,457016..457227,457337..457541,457716..457812,458177..458405,458543..458668,458769..458888,459104..459188,459426..459500,459765..459896,460062..460208,461793..462345,462986..463244,464439..464522,464787..464954,466385..468589)
location: region:436011-468589:1
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so has part: feature:455368-455470:1:exon
so has part: feature:455696-455843:1:exon
so has part: feature:456070-456167:1:exon
so has part: feature:456258-456482:1:exon
so has part: feature:456761-456915:1:exon
so has part: feature:457016-457227:1:exon
so has part: feature:457337-457541:1:exon
so has part: feature:457716-457812:1:exon
so has part: feature:458177-458405:1:exon
so has part: feature:458543-458668:1:exon
so has part: feature:458769-458888:1:exon
so has part: feature:459104-459188:1:exon
so has part: feature:459426-459500:1:exon
so has part: feature:459765-459896:1:exon
so has part: feature:460062-460208:1:exon
so has part: feature:461793-462345:1:exon
so has part: feature:462986-463244:1:exon
so has part: feature:464439-464522:1:exon
so has part: feature:464787-464954:1:exon
so has part: feature:466385-468589:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:436011-437012:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:442718-442819:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:445538-445636:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:446687-446785:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:447339-447437:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:447550-447735:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:447874-447972:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448529-448627:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:449042-449140:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:449542-449739:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:449831-449929:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:450086-450184:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:450415-450513:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:450694-450891:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:451053-451151:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:451245-451343:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:452308-452505:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:452699-452797:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:453198-453296:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:453539-453637:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:453742-453834:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:454029-454101:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:454470-454493:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:455368-455470:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:455696-455843:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:456070-456167:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:456258-456482:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:456761-456915:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:457016-457227:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:457337-457541:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:457716-457812:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:458177-458405:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:458543-458668:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:458769-458888:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:459104-459188:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:459426-459500:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:459765-459896:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:460062-460208:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:461793-462345:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:462986-463244:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:464439-464522:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:464787-464954:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:466385-468589:1:exon

ANK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ANK1
product: ankyrin 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030464183.1
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
location: join(436011..437012,442718..442819,445538..445636,446687..446785,447339..447437,447550..447735,447874..447972,448529..448627,449042..449140,449542..449739,449831..449929,450086..450184,450415..450513,450694..450891,451053..451151,451245..451343,452308..452505,452699..452797,453198..453296,453539..453637,453742..453834,454029..454101,455368..455470,455696..455843,456070..456167,456258..456482,456761..456915,457016..457227,457337..457541,457716..457812,458177..458405,458543..458668,458769..458888,459104..459188,459426..459500,459765..459896,460062..460208,461793..462345,462986..463244,464439..464522,464787..464954,465228..465349,466385..468589)
location: region:436011-468589:1
so has part: feature:436011-437012:1:exon
so has part: feature:442718-442819:1:exon
so has part: feature:445538-445636:1:exon
so has part: feature:446687-446785:1:exon
so has part: feature:447339-447437:1:exon
so has part: feature:447550-447735:1:exon
so has part: feature:447874-447972:1:exon
so has part: feature:448529-448627:1:exon
so has part: feature:449042-449140:1:exon
so has part: feature:449542-449739:1:exon
so has part: feature:449831-449929:1:exon
so has part: feature:450086-450184:1:exon
so has part: feature:450415-450513:1:exon
so has part: feature:450694-450891:1:exon
so has part: feature:451053-451151:1:exon
so has part: feature:451245-451343:1:exon
so has part: feature:452308-452505:1:exon
so has part: feature:452699-452797:1:exon
so has part: feature:453198-453296:1:exon
so has part: feature:453539-453637:1:exon
so has part: feature:453742-453834:1:exon
so has part: feature:454029-454101:1:exon
so has part: feature:455368-455470:1:exon
so has part: feature:455696-455843:1:exon
so has part: feature:456070-456167:1:exon
so has part: feature:456258-456482:1:exon
so has part: feature:456761-456915:1:exon
so has part: feature:457016-457227:1:exon
so has part: feature:457337-457541:1:exon
so has part: feature:457716-457812:1:exon
so has part: feature:458177-458405:1:exon
so has part: feature:458543-458668:1:exon
so has part: feature:458769-458888:1:exon
so has part: feature:459104-459188:1:exon
so has part: feature:459426-459500:1:exon
so has part: feature:459765-459896:1:exon
so has part: feature:460062-460208:1:exon
so has part: feature:461793-462345:1:exon
so has part: feature:462986-463244:1:exon
so has part: feature:464439-464522:1:exon
so has part: feature:464787-464954:1:exon
so has part: feature:465228-465349:1:exon
so has part: feature:466385-468589:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:436011-437012:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:442718-442819:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:445538-445636:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:446687-446785:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:447339-447437:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:447550-447735:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:447874-447972:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448529-448627:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:449042-449140:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:449542-449739:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:449831-449929:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:450086-450184:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:450415-450513:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:450694-450891:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:451053-451151:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:451245-451343:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:452308-452505:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:452699-452797:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:453198-453296:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:453539-453637:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:453742-453834:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:454029-454101:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:455368-455470:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:455696-455843:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:456070-456167:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:456258-456482:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:456761-456915:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:457016-457227:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:457337-457541:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:457716-457812:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:458177-458405:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:458543-458668:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:458769-458888:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:459104-459188:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:459426-459500:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:459765-459896:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:460062-460208:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:461793-462345:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:462986-463244:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:464439-464522:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:464787-464954:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:465228-465349:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:466385-468589:1:exon

ANK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ANK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin-1 isoform X6
translation: MQRAEAPVNIKGVTAFLWADAATSFLRAARSGNLDKALDHLRNGVDINTCNQNGLNALHLASKEGHVKMVVELLHKEIVLETTTKKGNTALHIAALAGQQDVVRELVNYGANVNAQSQKGFTPLYMAAQENHLEVVKFLLENGANQNVATEDGFTPLAVALQQGHENVVAHLINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNADVLSKTGFTPLHIAAHYENLSVAQLLLNRGASVNFTPQNGITPLHIASRRGNIIMVRLLLDRGAQIETKTKDELTPLHCAARNGHVRIAEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLLLQYSAEIDDITLDHLTPLHVAAHCGHHRVAKLLVEKGAKPNSRALNGFTPLHIACKKNHIRVMELLLKTGASIDAVTESGLTPLHVAAFMGHLPIVKTLLQRGASPNVSNVKVETPLHMAARAGHMDVAKYLLQNKAKANAKAKDDQTPLHCAARIGHTGMVKLLLENNANPNLATTAGHTPLHITAREGHVDTALALLEKGASQTCMTKKGFTPLHVAAKYGKVDVAELLLAHEAHPNAAGKNGLTPLHVAVHHNNLEIVKLLLPKGSSPHSSAWNGYSPLHIAAKQNQMEVASSLLQYGASANAESVQGVTPLHLASQEGHTDMVALLFSKQANGDLGNKSGLTPLHLVAQEGHVLVADVLVKHGVTVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYTPLHQAAQQGHTDVVTLLLKHGASPNEISTNGTTPLAIAKRLGYISVTDVLKIVTEETDIPSVGDKHRMSFPETVDEILDVSEDEGTAHVTVMEEELAAPKPRTPDSRDQERKREMLEFVTTTMLEQMVESPAVLQVPCVPPETVVTRAEETEQVGPVETEAEQVSLLHAPSVSPQEPSKEFDEDSLIPSSPATETSDNISPVASPVHTGFLVSFMVDARGGSMRGSRHHGLRVVIPPRACAAPTRITCRLVKPQKLPAPPPLAEEEGLASRIIALGPAGAQFLSPVIVEIPHFASYGRGDRELVVLRSENGSIWKEHRNRYEESYMDQLLSGMDEELESLEDLEKKRVCRIITTDFPLYFVVMSRICQDCDMIGPEGGCLKSTLVPMVQATFPDTAVTKKVRLALQAQPVPDELVTKLLGNQATFSPIVTVEPRRRKFHRPIGLRIPLPPSWKDNPRDSGEGDTTSLRLLCSVIGGTAQAQWEDITGTTKLIYENECANFTTNVSARFWLADCPRTAEAVHFATMLYKELTAVPYMAKFVVFAKMNDAREGRLRCYCMTDDKVDKTLEQHENFTEVARSRDIEVVEGMPLHVELSGNLVPVKKGTQPRSFLFQSFRENRLAIPIKVRDSSREASGSLSFLRKAMKYEDLQHVLCHLNITIPPCTKGSGSEERRRTLTPLSLRERYSILSETSFGSLSSTDKGDQKMVDVAEQLGLSWAELARELQFGVEDINRIRVENPNSLLEQSMALLNLWVSREGKNVKMESLYMALRNIDRGEIVNTLEGSGRHSRSLKSSWRYTERDYSLSPSQMNGYASLQDELLSPASLHYTLPSPLRADQYWNEVAIMDAIPMAATEQDALMEMSDMQVWSSGLTPSLVTAEDSSLECSKAEDSDATSEGRFPGQLLADAHGPDHMGSMDLVEDDTVDSDAMNGLIDLLEQEEGQRPEGKMPASDRQPGNGEQDPESEVSFVSVQQKVQARITSSPTVSHVVEKSGDRLRDWNAEGSFISCLQDLTAGSWQEGVTRRLLPTHTTASGAQGQEQEQVLVPTVELMRISSAEDSDWQPQHPTGSWQEEADSRFFGQGNEVLHLPGEQVTEEQFTDDHGNIITKKVIRKVVRQLSPGDMRDRQEQEELILEGSLQDPQDLEAEDDHFMKYSILHRDGLGAKDLTSTPNH
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
location: join(436959..437012,442718..442819,445538..445636,446687..446785,447339..447437,447550..447735,447874..447972,448529..448627,449042..449140,449542..449739,449831..449929,450086..450184,450415..450513,450694..450891,451053..451151,451245..451343,452308..452505,452699..452797,453198..453296,453539..453637,453742..453834,454029..454101,454470..454493,455368..455470,455696..455843,456070..456167,456258..456482,456761..456915,457016..457227,457337..457541,457716..457812,458177..458405,458543..458668,458769..458888,459104..459188,459426..459500,459765..459896,460062..460208,461793..462345,462986..463244,464439..464522,464787..464954,466385..466411)
location: region:436959-466411:1
so has part: feature:436959-437012:1:exon
so has part: feature:442718-442819:1:exon
so has part: feature:445538-445636:1:exon
so has part: feature:446687-446785:1:exon
so has part: feature:447339-447437:1:exon
so has part: feature:447550-447735:1:exon
so has part: feature:447874-447972:1:exon
so has part: feature:448529-448627:1:exon
so has part: feature:449042-449140:1:exon
so has part: feature:449542-449739:1:exon
so has part: feature:449831-449929:1:exon
so has part: feature:450086-450184:1:exon
so has part: feature:450415-450513:1:exon
so has part: feature:450694-450891:1:exon
so has part: feature:451053-451151:1:exon
so has part: feature:451245-451343:1:exon
so has part: feature:452308-452505:1:exon
so has part: feature:452699-452797:1:exon
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so has part: feature:454029-454101:1:exon
so has part: feature:454470-454493:1:exon
so has part: feature:455368-455470:1:exon
so has part: feature:455696-455843:1:exon
so has part: feature:456070-456167:1:exon
so has part: feature:456258-456482:1:exon
so has part: feature:456761-456915:1:exon
so has part: feature:457016-457227:1:exon
so has part: feature:457337-457541:1:exon
so has part: feature:457716-457812:1:exon
so has part: feature:458177-458405:1:exon
so has part: feature:458543-458668:1:exon
so has part: feature:458769-458888:1:exon
so has part: feature:459104-459188:1:exon
so has part: feature:459426-459500:1:exon
so has part: feature:459765-459896:1:exon
so has part: feature:460062-460208:1:exon
so has part: feature:461793-462345:1:exon
so has part: feature:462986-463244:1:exon
so has part: feature:464439-464522:1:exon
so has part: feature:464787-464954:1:exon
so has part: feature:466385-466411:1:exon

XP_030320046.1
type: Protein
SIO_000068: ncbiprotein

position:436959:1
position: 436959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466411:1
position: 466411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436959-437012:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:442718-442819:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:445538-445636:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:446687-446785:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:447339-447437:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:447550-447735:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:447874-447972:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448529-448627:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:449042-449140:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:449542-449739:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:449831-449929:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:450086-450184:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:450415-450513:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:450694-450891:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:451053-451151:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:451245-451343:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:452308-452505:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:452699-452797:1:exon

urn:…
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SIO_000628: feature:453198-453296:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:453539-453637:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:453742-453834:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:454029-454101:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:454470-454493:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:455368-455470:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:455696-455843:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:456070-456167:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:456258-456482:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:456761-456915:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:457016-457227:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:457337-457541:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:457716-457812:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:458177-458405:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:458543-458668:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:458769-458888:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:459104-459188:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:459426-459500:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:459765-459896:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:460062-460208:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:461793-462345:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:462986-463244:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:464439-464522:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:464787-464954:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:466385-466411:1:exon

ANK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ANK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin-1 isoform X1
translation: MQRAEAPVNIKGVTAFLWADAATSFLRAARSGNLDKALDHLRNGVDINTCNQNGLNALHLASKEGHVKMVVELLHKEIVLETTTKKGNTALHIAALAGQQDVVRELVNYGANVNAQSQKGFTPLYMAAQENHLEVVKFLLENGANQNVATEDGFTPLAVALQQGHENVVAHLINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNADVLSKTGFTPLHIAAHYENLSVAQLLLNRGASVNFTPQNGITPLHIASRRGNIIMVRLLLDRGAQIETKTKDELTPLHCAARNGHVRIAEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLLLQYSAEIDDITLDHLTPLHVAAHCGHHRVAKLLVEKGAKPNSRALNGFTPLHIACKKNHIRVMELLLKTGASIDAVTESGLTPLHVAAFMGHLPIVKTLLQRGASPNVSNVKVETPLHMAARAGHMDVAKYLLQNKAKANAKAKDDQTPLHCAARIGHTGMVKLLLENNANPNLATTAGHTPLHITAREGHVDTALALLEKGASQTCMTKKGFTPLHVAAKYGKVDVAELLLAHEAHPNAAGKNGLTPLHVAVHHNNLEIVKLLLPKGSSPHSSAWNGYSPLHIAAKQNQMEVASSLLQYGASANAESVQGVTPLHLASQEGHTDMVALLFSKQANGDLGNKSGLTPLHLVAQEGHVLVADVLVKHGVTVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYTPLHQAAQQGHTDVVTLLLKHGASPNEISTNGTTPLAIAKRLGYISVTDVLKIVTEETDIPSVGDKHRMSFPETVDEILDVSEDEGTAHVTVMEEELAAPKPRTPDSRDQERKREMLEFVTTTMLEQMVESPAVLQVPCVPPETVVTRAEETEQVGPVETEAEQVSLLHAPSVSPQEPSKEFDEDSLIPSSPATETSDNISPVASPVHTGFLVSFMVDARGGSMRGSRHHGLRVVIPPRACAAPTRITCRLVKPQKLPAPPPLAEEEGLASRIIALGPAGAQFLSPVIVEIPHFASYGRGDRELVVLRSENGSIWKEHRNRYEESYMDQLLSGMDEELESLEDLEKKRVCRIITTDFPLYFVVMSRICQDCDMIGPEGGCLKSTLVPMVQATFPDTAVTKKVRLALQAQPVPDELVTKLLGNQATFSPIVTVEPRRRKFHRPIGLRIPLPPSWKDNPRDSGEGDTTSLRLLCSVIGGTAQAQWEDITGTTKLIYENECANFTTNVSARFWLADCPRTAEAVHFATMLYKELTAVPYMAKFVVFAKMNDAREGRLRCYCMTDDKVDKTLEQHENFTEVARSRDIEVVEGMPLHVELSGNLVPVKKGTQPRSFLFQSFRENRLAIPIKVRDSSREASGSLSFLRKAMKYEDLQHVLCHLNITIPPCTKGSGSEERRRTLTPLSLRERYSILSETSFGSLSSTDKGDQKMVDVAEQLGLSWAELARELQFGVEDINRIRVENPNSLLEQSMALLNLWVSREGKNVKMESLYMALRNIDRGEIVNTLEGSGRHSRSLKSSWRYTERDYSLSPSQMNGYASLQDELLSPASLHYTLPSPLRADQYWNEVAIMDAIPMAATEQDALMEMSDMQVWSSGLTPSLVTAEDSSLECSKAEDSDATSEGRFPGQLLADAHGPDHMGSMDLVEDDTVDSDAMNGLIDLLEQEEGQRPEGKMPASDRQPGNGEQDPESEVSFVSVQQKVQARITSSPTVSHVVEKSGDRLRDWNAEGSFISCLQDLTAGSWQEGVTRRLLPTHTTASGAQGQEQEQVLVPTVELMRISSAEDSDWQPQHPTGSWQEEADSRFFGQGNEVLHLPGEQVTEEQFTDDHGNIITKKVIRKVVRQLSPGDMRDRQEQEELILEGSLQDPQDLEAEDDHFMKYSILHRDGLGAKEEMQVRVPKPEVSGGRMGAQIVKRASLKRGKQ
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
location: join(436959..437012,442718..442819,445538..445636,446687..446785,447339..447437,447550..447735,447874..447972,448529..448627,449042..449140,449542..449739,449831..449929,450086..450184,450415..450513,450694..450891,451053..451151,451245..451343,452308..452505,452699..452797,453198..453296,453539..453637,453742..453834,454029..454101,454470..454493,455368..455470,455696..455843,456070..456167,456258..456482,456761..456915,457016..457227,457337..457541,457716..457812,458177..458405,458543..458668,458769..458888,459104..459188,459426..459500,459765..459896,460062..460208,461793..462345,462986..463244,464439..464522,464787..464954,465228..465326)
location: region:436959-465326:1
so has part: feature:436959-437012:1:exon
so has part: feature:442718-442819:1:exon
so has part: feature:445538-445636:1:exon
so has part: feature:446687-446785:1:exon
so has part: feature:447339-447437:1:exon
so has part: feature:447550-447735:1:exon
so has part: feature:447874-447972:1:exon
so has part: feature:448529-448627:1:exon
so has part: feature:449042-449140:1:exon
so has part: feature:449542-449739:1:exon
so has part: feature:449831-449929:1:exon
so has part: feature:450086-450184:1:exon
so has part: feature:450415-450513:1:exon
so has part: feature:450694-450891:1:exon
so has part: feature:451053-451151:1:exon
so has part: feature:451245-451343:1:exon
so has part: feature:452308-452505:1:exon
so has part: feature:452699-452797:1:exon
so has part: feature:453198-453296:1:exon
so has part: feature:453539-453637:1:exon
so has part: feature:453742-453834:1:exon
so has part: feature:454029-454101:1:exon
so has part: feature:454470-454493:1:exon
so has part: feature:455368-455470:1:exon
so has part: feature:455696-455843:1:exon
so has part: feature:456070-456167:1:exon
so has part: feature:456258-456482:1:exon
so has part: feature:456761-456915:1:exon
so has part: feature:457016-457227:1:exon
so has part: feature:457337-457541:1:exon
so has part: feature:457716-457812:1:exon
so has part: feature:458177-458405:1:exon
so has part: feature:458543-458668:1:exon
so has part: feature:458769-458888:1:exon
so has part: feature:459104-459188:1:exon
so has part: feature:459426-459500:1:exon
so has part: feature:459765-459896:1:exon
so has part: feature:460062-460208:1:exon
so has part: feature:461793-462345:1:exon
so has part: feature:462986-463244:1:exon
so has part: feature:464439-464522:1:exon
so has part: feature:464787-464954:1:exon
so has part: feature:465228-465326:1:exon

XP_030320041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:436959-437012:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:442718-442819:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:445538-445636:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:446687-446785:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:447339-447437:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:447550-447735:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:447874-447972:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448529-448627:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:449042-449140:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:449542-449739:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:449831-449929:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:450086-450184:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:450415-450513:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:450694-450891:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:451053-451151:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:451245-451343:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:452308-452505:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:452699-452797:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:453198-453296:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:453539-453637:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:453742-453834:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:454029-454101:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:454470-454493:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:455368-455470:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:455696-455843:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:456070-456167:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:456258-456482:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:456761-456915:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:457016-457227:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:457337-457541:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:457716-457812:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:458177-458405:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:458543-458668:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:458769-458888:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:459104-459188:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:459426-459500:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:459765-459896:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:460062-460208:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:461793-462345:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:462986-463244:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:464439-464522:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:464787-464954:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:465228-465326:1:exon

ANK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ANK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin-1 isoform X3
translation: MQRAEAPVNIKGVTAFLWADAATSFLRAARSGNLDKALDHLRNGVDINTCNQNGLNALHLASKEGHVKMVVELLHKEIVLETTTKKGNTALHIAALAGQQDVVRELVNYGANVNAQSQKGFTPLYMAAQENHLEVVKFLLENGANQNVATEDGFTPLAVALQQGHENVVAHLINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNADVLSKTGFTPLHIAAHYENLSVAQLLLNRGASVNFTPQNGITPLHIASRRGNIIMVRLLLDRGAQIETKTKDELTPLHCAARNGHVRIAEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLLLQYSAEIDDITLDHLTPLHVAAHCGHHRVAKLLVEKGAKPNSRALNGFTPLHIACKKNHIRVMELLLKTGASIDAVTESGLTPLHVAAFMGHLPIVKTLLQRGASPNVSNVKVETPLHMAARAGHMDVAKYLLQNKAKANAKAKDDQTPLHCAARIGHTGMVKLLLENNANPNLATTAGHTPLHITAREGHVDTALALLEKGASQTCMTKKGFTPLHVAAKYGKVDVAELLLAHEAHPNAAGKNGLTPLHVAVHHNNLEIVKLLLPKGSSPHSSAWNGYSPLHIAAKQNQMEVASSLLQYGASANAESVQGVTPLHLASQEGHTDMVALLFSKQANGDLGNKSGLTPLHLVAQEGHVLVADVLVKHGVTVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYTPLHQAAQQGHTDVVTLLLKHGASPNEISTNGTTPLAIAKRLGYISVTDVLKIVTEETDIPSVGDKHRMSFPETVDEILDVSEDEEEELAAPKPRTPDSRDQERKREMLEFVTTTMLEQMVESPAVLQVPCVPPETVVTRAEETEQVGPVETEAEQVSLLHAPSVSPQEPSKEFDEDSLIPSSPATETSDNISPVASPVHTGFLVSFMVDARGGSMRGSRHHGLRVVIPPRACAAPTRITCRLVKPQKLPAPPPLAEEEGLASRIIALGPAGAQFLSPVIVEIPHFASYGRGDRELVVLRSENGSIWKEHRNRYEESYMDQLLSGMDEELESLEDLEKKRVCRIITTDFPLYFVVMSRICQDCDMIGPEGGCLKSTLVPMVQATFPDTAVTKKVRLALQAQPVPDELVTKLLGNQATFSPIVTVEPRRRKFHRPIGLRIPLPPSWKDNPRDSGEGDTTSLRLLCSVIGGTAQAQWEDITGTTKLIYENECANFTTNVSARFWLADCPRTAEAVHFATMLYKELTAVPYMAKFVVFAKMNDAREGRLRCYCMTDDKVDKTLEQHENFTEVARSRDIEVVEGMPLHVELSGNLVPVKKGTQPRSFLFQSFRENRLAIPIKVRDSSREASGSLSFLRKAMKYEDLQHVLCHLNITIPPCTKGSGSEERRRTLTPLSLRERYSILSETSFGSLSSTDKGDQKMVDVAEQLGLSWAELARELQFGVEDINRIRVENPNSLLEQSMALLNLWVSREGKNVKMESLYMALRNIDRGEIVNTLEGSGRHSRSLKSSWRYTERDYSLSPSQMNGYASLQDELLSPASLHYTLPSPLRADQYWNEVAIMDAIPMAATEQDALMEMSDMQVWSSGLTPSLVTAEDSSLECSKAEDSDATSEGRFPGQLLADAHGPDHMGSMDLVEDDTVDSDAMNGLIDLLEQEEGQRPEGKMPASDRQPGNGEQDPESEVSFVSVQQKVQARITSSPTVSHVVEKSGDRLRDWNAEGSFISCLQDLTAGSWQEGVTRRLLPTHTTASGAQGQEQEQVLVPTVELMRISSAEDSDWQPQHPTGSWQEEADSRFFGQGNEVLHLPGEQVTEEQFTDDHGNIITKKVIRKVVRQLSPGDMRDRQEQEELILEGSLQDPQDLEAEDDHFMKYSILHRDGLGAKEEMQVRVPKPEVSGGRMGAQIVKRASLKRGKQ
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
location: join(436959..437012,442718..442819,445538..445636,446687..446785,447339..447437,447550..447735,447874..447972,448529..448627,449042..449140,449542..449739,449831..449929,450086..450184,450415..450513,450694..450891,451053..451151,451245..451343,452308..452505,452699..452797,453198..453296,453539..453637,453742..453834,454029..454101,455368..455470,455696..455843,456070..456167,456258..456482,456761..456915,457016..457227,457337..457541,457716..457812,458177..458405,458543..458668,458769..458888,459104..459188,459426..459500,459765..459896,460062..460208,461793..462345,462986..463244,464439..464522,464787..464954,465228..465326)
location: region:436959-465326:1
so has part: feature:436959-437012:1:exon
so has part: feature:442718-442819:1:exon
so has part: feature:445538-445636:1:exon
so has part: feature:446687-446785:1:exon
so has part: feature:447339-447437:1:exon
so has part: feature:447550-447735:1:exon
so has part: feature:447874-447972:1:exon
so has part: feature:448529-448627:1:exon
so has part: feature:449042-449140:1:exon
so has part: feature:449542-449739:1:exon
so has part: feature:449831-449929:1:exon
so has part: feature:450086-450184:1:exon
so has part: feature:450415-450513:1:exon
so has part: feature:450694-450891:1:exon
so has part: feature:451053-451151:1:exon
so has part: feature:451245-451343:1:exon
so has part: feature:452308-452505:1:exon
so has part: feature:452699-452797:1:exon
so has part: feature:453198-453296:1:exon
so has part: feature:453539-453637:1:exon
so has part: feature:453742-453834:1:exon
so has part: feature:454029-454101:1:exon
so has part: feature:455368-455470:1:exon
so has part: feature:455696-455843:1:exon
so has part: feature:456070-456167:1:exon
so has part: feature:456258-456482:1:exon
so has part: feature:456761-456915:1:exon
so has part: feature:457016-457227:1:exon
so has part: feature:457337-457541:1:exon
so has part: feature:457716-457812:1:exon
so has part: feature:458177-458405:1:exon
so has part: feature:458543-458668:1:exon
so has part: feature:458769-458888:1:exon
so has part: feature:459104-459188:1:exon
so has part: feature:459426-459500:1:exon
so has part: feature:459765-459896:1:exon
so has part: feature:460062-460208:1:exon
so has part: feature:461793-462345:1:exon
so has part: feature:462986-463244:1:exon
so has part: feature:464439-464522:1:exon
so has part: feature:464787-464954:1:exon
so has part: feature:465228-465326:1:exon

XP_030320043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:436959-437012:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:442718-442819:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:445538-445636:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:446687-446785:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:447339-447437:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:447550-447735:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:447874-447972:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448529-448627:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:449042-449140:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:449542-449739:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:449831-449929:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:450086-450184:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:450415-450513:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:450694-450891:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:451053-451151:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:451245-451343:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:452308-452505:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:452699-452797:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:453198-453296:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:453539-453637:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:453742-453834:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:454029-454101:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:455368-455470:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:455696-455843:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:456070-456167:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:456258-456482:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:456761-456915:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:457016-457227:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:457337-457541:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:457716-457812:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:458177-458405:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:458543-458668:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:458769-458888:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:459104-459188:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:459426-459500:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:459765-459896:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:460062-460208:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:461793-462345:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:462986-463244:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:464439-464522:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:464787-464954:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:465228-465326:1:exon

ANK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ANK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin-1 isoform X7
translation: MQRAEAPVNIKGVTAFLWADAATSFLRAARSGNLDKALDHLRNGVDINTCNQNGLNALHLASKEGHVKMVVELLHKEIVLETTTKKGNTALHIAALAGQQDVVRELVNYGANVNAQSQKGFTPLYMAAQENHLEVVKFLLENGANQNVATEDGFTPLAVALQQGHENVVAHLINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNADVLSKTGFTPLHIAAHYENLSVAQLLLNRGASVNFTPQNGITPLHIASRRGNIIMVRLLLDRGAQIETKTKDELTPLHCAARNGHVRIAEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLLLQYSAEIDDITLDHLTPLHVAAHCGHHRVAKLLVEKGAKPNSRALNGFTPLHIACKKNHIRVMELLLKTGASIDAVTESGLTPLHVAAFMGHLPIVKTLLQRGASPNVSNVKVETPLHMAARAGHMDVAKYLLQNKAKANAKAKDDQTPLHCAARIGHTGMVKLLLENNANPNLATTAGHTPLHITAREGHVDTALALLEKGASQTCMTKKGFTPLHVAAKYGKVDVAELLLAHEAHPNAAGKNGLTPLHVAVHHNNLEIVKLLLPKGSSPHSSAWNGYSPLHIAAKQNQMEVASSLLQYGASANAESVQGVTPLHLASQEGHTDMVALLFSKQANGDLGNKSGLTPLHLVAQEGHVLVADVLVKHGVTVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYTPLHQAAQQGHTDVVTLLLKHGASPNEISTNGTTPLAIAKRLGYISVTDVLKIVTEETDIPSVGDKHRMSFPETVDEILDVSEDEGTAHVTVMEEELAAPKPRTPDSRDQERKREMLEFVTTTMLEQMVESPAVLQVPCVPPETVVTRAEETEQVGPVETEAEQVSLLHAPSVSPQEPSKEFDEDSLIPSSPATETSDNISPVASPVHTGFLVSFMVDARGGSMRGSRHHGLRVVIPPRACAAPTRITCRLVKPQKLPAPPPLAEEEGLASRIIALGPAGAQFLSPVIVEIPHFASYGRGDRELVVLRSENGSIWKEHRNRYEESYMDQLLSGMDEELESLEDLEKKRVCRIITTDFPLYFVVMSRICQDCDMIGPEGGCLKSTLVPMVQATFPDTAVTKKVRLALQAQPVPDELVTKLLGNQATFSPIVTVEPRRRKFHRPIGLRIPLPPSWKDNPRDSGEGDTTSLRLLCSVIGGTAQAQWEDITGTTKLIYENECANFTTNVSARFWLADCPRTAEAVHFATMLYKELTAVPYMAKFVVFAKMNDAREGRLRCYCMTDDKVDKTLEQHENFTEVARSRDIEVVEGMPLHVELSGNLVPVKKGTQPRSFLFQSFRENRLAIPIKVRDSSREASGSLSFLRKAMKYEDLQHVLCHLNITIPPCTKGSGSEERRRTLTPLSLRERYSILSETSFGSLSSTDKGDQKMVDVAEQLGLSWAELARELQFGVEDINRIRVENPNSLLEQSMALLNLWVSREGKNVKMESLYMALRNIDRGEIVNTLEGSGRHSRSLKSSWRYTERDYSLSPSQMNGYASLQDELLSPASLHYTLPSPLRADQYWNEVAIMDAIPMAATEQDALMEMSDMQVWSSGLTPSLVTAEDSSLECSKAEDSDATSEGRFPGQLLADAHGPDHMGSMDLVEDDTVDSDAMNGLIDLLEQEEGQRPEGKMPASDRQPGNGEQDPESEVSFVSVQQKVQARITSSPTVSHVVEKSGDRT
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
location: join(436959..437012,442718..442819,445538..445636,446687..446785,447339..447437,447550..447735,447874..447972,448529..448627,449042..449140,449542..449739,449831..449929,450086..450184,450415..450513,450694..450891,451053..451151,451245..451343,452308..452505,452699..452797,453198..453296,453539..453637,453742..453834,454029..454101,454470..454493,455368..455470,455696..455843,456070..456167,456258..456482,456761..456915,457016..457227,457337..457541,457716..457812,458177..458405,458543..458668,458769..458888,459104..459188,459426..459500,459765..459896,460062..460208,461793..462345,463032..463038)
location: region:436959-463038:1
so has part: feature:436959-437012:1:exon
so has part: feature:442718-442819:1:exon
so has part: feature:445538-445636:1:exon
so has part: feature:446687-446785:1:exon
so has part: feature:447339-447437:1:exon
so has part: feature:447550-447735:1:exon
so has part: feature:447874-447972:1:exon
so has part: feature:448529-448627:1:exon
so has part: feature:449042-449140:1:exon
so has part: feature:449542-449739:1:exon
so has part: feature:449831-449929:1:exon
so has part: feature:450086-450184:1:exon
so has part: feature:450415-450513:1:exon
so has part: feature:450694-450891:1:exon
so has part: feature:451053-451151:1:exon
so has part: feature:451245-451343:1:exon
so has part: feature:452308-452505:1:exon
so has part: feature:452699-452797:1:exon
so has part: feature:453198-453296:1:exon
so has part: feature:453539-453637:1:exon
so has part: feature:453742-453834:1:exon
so has part: feature:454029-454101:1:exon
so has part: feature:454470-454493:1:exon
so has part: feature:455368-455470:1:exon
so has part: feature:455696-455843:1:exon
so has part: feature:456070-456167:1:exon
so has part: feature:456258-456482:1:exon
so has part: feature:456761-456915:1:exon
so has part: feature:457016-457227:1:exon
so has part: feature:457337-457541:1:exon
so has part: feature:457716-457812:1:exon
so has part: feature:458177-458405:1:exon
so has part: feature:458543-458668:1:exon
so has part: feature:458769-458888:1:exon
so has part: feature:459104-459188:1:exon
so has part: feature:459426-459500:1:exon
so has part: feature:459765-459896:1:exon
so has part: feature:460062-460208:1:exon
so has part: feature:461793-462345:1:exon
so has part: feature:463032-463038:1:exon

XP_030320047.1
type: Protein
SIO_000068: ncbiprotein

position:463038:1
position: 463038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436959-437012:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:442718-442819:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:445538-445636:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:446687-446785:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:447339-447437:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:447550-447735:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:447874-447972:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448529-448627:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:449042-449140:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:449542-449739:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:449831-449929:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:450086-450184:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:450415-450513:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:450694-450891:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:451053-451151:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:451245-451343:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:452308-452505:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:452699-452797:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:453198-453296:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:453539-453637:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:453742-453834:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:454029-454101:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:454470-454493:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:455368-455470:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:455696-455843:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:456070-456167:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:456258-456482:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:456761-456915:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:457016-457227:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:457337-457541:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:457716-457812:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:458177-458405:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:458543-458668:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:458769-458888:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:459104-459188:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:459426-459500:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:459765-459896:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:460062-460208:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:461793-462345:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:463032-463038:1:exon

ANK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ANK1
product: ankyrin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030464182.1
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
location: join(440801..440923,442718..442819,445538..445636,446687..446785,447339..447437,447550..447735,447874..447972,448529..448627,449042..449140,449542..449739,449831..449929,450086..450184,450415..450513,450694..450891,451053..451151,451245..451343,452308..452505,452699..452797,453198..453296,453539..453637,453742..453834,454029..454101,454470..454493,455368..455470,455696..455843,456070..456167,456258..456482,456761..456915,457016..457227,457337..457541,457716..457812,458177..458405,458543..458668,458769..458888,459104..459188,459426..459500,459765..459896,460062..460208,461793..462345,462986..463244,464439..464522,464787..464954,465228..465349,466385..468589)
location: region:440801-468589:1
so has part: feature:440801-440923:1:exon
so has part: feature:442718-442819:1:exon
so has part: feature:445538-445636:1:exon
so has part: feature:446687-446785:1:exon
so has part: feature:447339-447437:1:exon
so has part: feature:447550-447735:1:exon
so has part: feature:447874-447972:1:exon
so has part: feature:448529-448627:1:exon
so has part: feature:449042-449140:1:exon
so has part: feature:449542-449739:1:exon
so has part: feature:449831-449929:1:exon
so has part: feature:450086-450184:1:exon
so has part: feature:450415-450513:1:exon
so has part: feature:450694-450891:1:exon
so has part: feature:451053-451151:1:exon
so has part: feature:451245-451343:1:exon
so has part: feature:452308-452505:1:exon
so has part: feature:452699-452797:1:exon
so has part: feature:453198-453296:1:exon
so has part: feature:453539-453637:1:exon
so has part: feature:453742-453834:1:exon
so has part: feature:454029-454101:1:exon
so has part: feature:454470-454493:1:exon
so has part: feature:455368-455470:1:exon
so has part: feature:455696-455843:1:exon
so has part: feature:456070-456167:1:exon
so has part: feature:456258-456482:1:exon
so has part: feature:456761-456915:1:exon
so has part: feature:457016-457227:1:exon
so has part: feature:457337-457541:1:exon
so has part: feature:457716-457812:1:exon
so has part: feature:458177-458405:1:exon
so has part: feature:458543-458668:1:exon
so has part: feature:458769-458888:1:exon
so has part: feature:459104-459188:1:exon
so has part: feature:459426-459500:1:exon
so has part: feature:459765-459896:1:exon
so has part: feature:460062-460208:1:exon
so has part: feature:461793-462345:1:exon
so has part: feature:462986-463244:1:exon
so has part: feature:464439-464522:1:exon
so has part: feature:464787-464954:1:exon
so has part: feature:465228-465349:1:exon
so has part: feature:466385-468589:1:exon

position:440801:1
position: 440801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440801-440923:1:exon

position:440923:1
position: 440923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:442718-442819:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:445538-445636:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:446687-446785:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:447339-447437:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:447550-447735:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:447874-447972:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448529-448627:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:449042-449140:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:449542-449739:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:449831-449929:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:450086-450184:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:450415-450513:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:450694-450891:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:451053-451151:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:451245-451343:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:452308-452505:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:452699-452797:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:453198-453296:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:453539-453637:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:453742-453834:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:454029-454101:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:454470-454493:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:455368-455470:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:455696-455843:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:456070-456167:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:456258-456482:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:456761-456915:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:457016-457227:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:457337-457541:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:457716-457812:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:458177-458405:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:458543-458668:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:458769-458888:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:459104-459188:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:459426-459500:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:459765-459896:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:460062-460208:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:461793-462345:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:462986-463244:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:464439-464522:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:464787-464954:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:465228-465349:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:466385-468589:1:exon

ANK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ANK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin-1 isoform X2
translation: MAARKGRSGPEVAADAATSFLRAARSGNLDKALDHLRNGVDINTCNQNGLNALHLASKEGHVKMVVELLHKEIVLETTTKKGNTALHIAALAGQQDVVRELVNYGANVNAQSQKGFTPLYMAAQENHLEVVKFLLENGANQNVATEDGFTPLAVALQQGHENVVAHLINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNADVLSKTGFTPLHIAAHYENLSVAQLLLNRGASVNFTPQNGITPLHIASRRGNIIMVRLLLDRGAQIETKTKDELTPLHCAARNGHVRIAEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLLLQYSAEIDDITLDHLTPLHVAAHCGHHRVAKLLVEKGAKPNSRALNGFTPLHIACKKNHIRVMELLLKTGASIDAVTESGLTPLHVAAFMGHLPIVKTLLQRGASPNVSNVKVETPLHMAARAGHMDVAKYLLQNKAKANAKAKDDQTPLHCAARIGHTGMVKLLLENNANPNLATTAGHTPLHITAREGHVDTALALLEKGASQTCMTKKGFTPLHVAAKYGKVDVAELLLAHEAHPNAAGKNGLTPLHVAVHHNNLEIVKLLLPKGSSPHSSAWNGYSPLHIAAKQNQMEVASSLLQYGASANAESVQGVTPLHLASQEGHTDMVALLFSKQANGDLGNKSGLTPLHLVAQEGHVLVADVLVKHGVTVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYTPLHQAAQQGHTDVVTLLLKHGASPNEISTNGTTPLAIAKRLGYISVTDVLKIVTEETDIPSVGDKHRMSFPETVDEILDVSEDEGTAHVTVMEEELAAPKPRTPDSRDQERKREMLEFVTTTMLEQMVESPAVLQVPCVPPETVVTRAEETEQVGPVETEAEQVSLLHAPSVSPQEPSKEFDEDSLIPSSPATETSDNISPVASPVHTGFLVSFMVDARGGSMRGSRHHGLRVVIPPRACAAPTRITCRLVKPQKLPAPPPLAEEEGLASRIIALGPAGAQFLSPVIVEIPHFASYGRGDRELVVLRSENGSIWKEHRNRYEESYMDQLLSGMDEELESLEDLEKKRVCRIITTDFPLYFVVMSRICQDCDMIGPEGGCLKSTLVPMVQATFPDTAVTKKVRLALQAQPVPDELVTKLLGNQATFSPIVTVEPRRRKFHRPIGLRIPLPPSWKDNPRDSGEGDTTSLRLLCSVIGGTAQAQWEDITGTTKLIYENECANFTTNVSARFWLADCPRTAEAVHFATMLYKELTAVPYMAKFVVFAKMNDAREGRLRCYCMTDDKVDKTLEQHENFTEVARSRDIEVVEGMPLHVELSGNLVPVKKGTQPRSFLFQSFRENRLAIPIKVRDSSREASGSLSFLRKAMKYEDLQHVLCHLNITIPPCTKGSGSEERRRTLTPLSLRERYSILSETSFGSLSSTDKGDQKMVDVAEQLGLSWAELARELQFGVEDINRIRVENPNSLLEQSMALLNLWVSREGKNVKMESLYMALRNIDRGEIVNTLEGSGRHSRSLKSSWRYTERDYSLSPSQMNGYASLQDELLSPASLHYTLPSPLRADQYWNEVAIMDAIPMAATEQDALMEMSDMQVWSSGLTPSLVTAEDSSLECSKAEDSDATSEGRFPGQLLADAHGPDHMGSMDLVEDDTVDSDAMNGLIDLLEQEEGQRPEGKMPASDRQPGNGEQDPESEVSFVSVQQKVQARITSSPTVSHVVEKSGDRLRDWNAEGSFISCLQDLTAGSWQEGVTRRLLPTHTTASGAQGQEQEQVLVPTVELMRISSAEDSDWQPQHPTGSWQEEADSRFFGQGNEVLHLPGEQVTEEQFTDDHGNIITKKVIRKVVRQLSPGDMRDRQEQEELILEGSLQDPQDLEAEDDHFMKYSILHRDGLGAKEEMQVRVPKPEVSGGRMGAQIVKRASLKRGKQ
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
location: join(440885..440923,442718..442819,445538..445636,446687..446785,447339..447437,447550..447735,447874..447972,448529..448627,449042..449140,449542..449739,449831..449929,450086..450184,450415..450513,450694..450891,451053..451151,451245..451343,452308..452505,452699..452797,453198..453296,453539..453637,453742..453834,454029..454101,454470..454493,455368..455470,455696..455843,456070..456167,456258..456482,456761..456915,457016..457227,457337..457541,457716..457812,458177..458405,458543..458668,458769..458888,459104..459188,459426..459500,459765..459896,460062..460208,461793..462345,462986..463244,464439..464522,464787..464954,465228..465326)
location: region:440885-465326:1
so has part: feature:440885-440923:1:exon
so has part: feature:442718-442819:1:exon
so has part: feature:445538-445636:1:exon
so has part: feature:446687-446785:1:exon
so has part: feature:447339-447437:1:exon
so has part: feature:447550-447735:1:exon
so has part: feature:447874-447972:1:exon
so has part: feature:448529-448627:1:exon
so has part: feature:449042-449140:1:exon
so has part: feature:449542-449739:1:exon
so has part: feature:449831-449929:1:exon
so has part: feature:450086-450184:1:exon
so has part: feature:450415-450513:1:exon
so has part: feature:450694-450891:1:exon
so has part: feature:451053-451151:1:exon
so has part: feature:451245-451343:1:exon
so has part: feature:452308-452505:1:exon
so has part: feature:452699-452797:1:exon
so has part: feature:453198-453296:1:exon
so has part: feature:453539-453637:1:exon
so has part: feature:453742-453834:1:exon
so has part: feature:454029-454101:1:exon
so has part: feature:454470-454493:1:exon
so has part: feature:455368-455470:1:exon
so has part: feature:455696-455843:1:exon
so has part: feature:456070-456167:1:exon
so has part: feature:456258-456482:1:exon
so has part: feature:456761-456915:1:exon
so has part: feature:457016-457227:1:exon
so has part: feature:457337-457541:1:exon
so has part: feature:457716-457812:1:exon
so has part: feature:458177-458405:1:exon
so has part: feature:458543-458668:1:exon
so has part: feature:458769-458888:1:exon
so has part: feature:459104-459188:1:exon
so has part: feature:459426-459500:1:exon
so has part: feature:459765-459896:1:exon
so has part: feature:460062-460208:1:exon
so has part: feature:461793-462345:1:exon
so has part: feature:462986-463244:1:exon
so has part: feature:464439-464522:1:exon
so has part: feature:464787-464954:1:exon
so has part: feature:465228-465326:1:exon

XP_030320042.1
type: Protein
SIO_000068: ncbiprotein

position:440885:1
position: 440885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440885-440923:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:442718-442819:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:445538-445636:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:446687-446785:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:447339-447437:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:447550-447735:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:447874-447972:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448529-448627:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:449042-449140:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:449542-449739:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:449831-449929:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:450086-450184:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:450415-450513:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:450694-450891:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:451053-451151:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:451245-451343:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:452308-452505:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:452699-452797:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:453198-453296:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:453539-453637:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:453742-453834:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:454029-454101:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:454470-454493:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:455368-455470:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:455696-455843:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:456070-456167:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:456258-456482:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:456761-456915:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:457016-457227:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:457337-457541:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:457716-457812:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:458177-458405:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:458543-458668:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:458769-458888:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:459104-459188:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:459426-459500:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:459765-459896:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:460062-460208:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:461793-462345:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:462986-463244:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:464439-464522:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:464787-464954:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:465228-465326:1:exon

ANK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ANK1
product: ankyrin 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_030464188.1
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
location: join(463255..464245,464439..464522,464787..464954,465228..465349,466385..468589)
location: region:463255-468589:1
so has part: feature:463255-464245:1:exon
so has part: feature:464439-464522:1:exon
so has part: feature:464787-464954:1:exon
so has part: feature:465228-465349:1:exon
so has part: feature:466385-468589:1:exon

position:463255:1
position: 463255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463255-464245:1:exon

position:464245:1
position: 464245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:464439-464522:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464787-464954:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:465228-465349:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:466385-468589:1:exon

ANK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ANK1
product: ankyrin 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_030464189.1
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
location: join(463257..464245,464439..464522,464787..464954,466385..468589)
location: region:463257-468589:1
so has part: feature:463257-464245:1:exon
so has part: feature:464439-464522:1:exon
so has part: feature:464787-464954:1:exon
so has part: feature:466385-468589:1:exon

position:463257:1
position: 463257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463257-464245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:464439-464522:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464787-464954:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:466385-468589:1:exon

ANK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ANK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin-1 isoform X9
translation: MWALLAQLLIALVLLAFFLVSCQNVMHIVRGSVRFLLKHAHHELDKELGESPGLVDDEEVLSTRVVRRRVLVKGNEVLHLPGEQVTEEQFTDDHGNIITKKVIRKVVRQLSPGDMRDRQEQEELILEGSLQDPQDLEAEDDHFMKYSILHRDGLGAKDLTSTPNH
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
location: join(464027..464245,464439..464522,464787..464954,466385..466411)
location: region:464027-466411:1
so has part: feature:464027-464245:1:exon
so has part: feature:464439-464522:1:exon
so has part: feature:464787-464954:1:exon
so has part: feature:466385-466411:1:exon

XP_030320049.1
type: Protein
SIO_000068: ncbiprotein

position:464027:1
position: 464027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464027-464245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:464439-464522:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464787-464954:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:466385-466411:1:exon

ANK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ANK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin-1 isoform X8
translation: MWALLAQLLIALVLLAFFLVSCQNVMHIVRGSVRFLLKHAHHELDKELGESPGLVDDEEVLSTRVVRRRVLVKGNEVLHLPGEQVTEEQFTDDHGNIITKKVIRKVVRQLSPGDMRDRQEQEELILEGSLQDPQDLEAEDDHFMKYSILHRDGLGAKEEMQVRVPKPEVSGGRMGAQIVKRASLKRGKQ
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
location: join(464027..464245,464439..464522,464787..464954,465228..465326)
location: region:464027-465326:1
so has part: feature:464027-464245:1:exon
so has part: feature:464439-464522:1:exon
so has part: feature:464787-464954:1:exon
so has part: feature:465228-465326:1:exon

XP_030320048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:464027-464245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:464439-464522:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464787-464954:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:465228-465326:1:exon

NKX6-3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: NKX6-3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 469628..472121
location: region:469628-472121:1
so has part: feature:469628-472121:1:exon
subclass of: SO_0000010

103535372
type: Gene
SIO_000068: ncbigene

position:469628:1
position: 469628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472121:1
position: 472121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469628-472121:1:exon

NKX6-3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NKX6-3
product: NK6 homeobox 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_008501421.2
SIO_010081: NKX6-3
subclass of: SO_0000673
so part of: NKX6-3
location: join(469628..470229,471207..471376,471445..472121)
location: region:469628-472121:1
so has part: feature:469628-470229:1:exon
so has part: feature:471207-471376:1:exon
so has part: feature:471445-472121:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:469628-470229:1:exon

position:470229:1
position: 470229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:471207-471376:1:exon

position:471207:1
position: 471207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471376:1
position: 471376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:471445-472121:1:exon

position:471445:1
position: 471445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NKX6-3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NKX6-3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Nkx-6.3
translation: MDANLPGTFLLNGPALGPFPEAKAPVCQYSVQSSFYKLSPPGLGTQLAAGTPHGISDILGRPAATTNSSILPGYPHVGGFNGLSSPGVYYGPQVGALPKAGSDYLPRGRSCWAEAAPDWRGGRQCDGPPAHLADSIHKKKHTRPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKSALEPSSSSQRAGGSGGERVVSEAEDDEYNKPLDPDSDDEKIRLLLRKHRAAFSVLGLGSHSG
SIO_010081: NKX6-3
subclass of: SO_0000673
so part of: NKX6-3
location: join(469848..470229,471207..471376,471445..471675)
location: region:469848-471675:1
so has part: feature:469848-470229:1:exon
so has part: feature:471207-471376:1:exon
so has part: feature:471445-471675:1:exon

XP_008499643.2
type: Protein
SIO_000068: ncbiprotein

position:469848:1
position: 469848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471675:1
position: 471675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469848-470229:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:471207-471376:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:471445-471675:1:exon

GPAT4
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: GPAT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(475876..483074)
location: region:475876-483074:-1
so has part: feature:475876-483074:-1:exon
subclass of: SO_0000010

103535361
type: Gene
SIO_000068: ncbigene

position:475876:-1
position: 475876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483074:-1
position: 483074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475876-483074:-1:exon

GPAT4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: GPAT4
product: glycerol-3-phosphate acyltransferase 4
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 18 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_030464191.1
SIO_010081: GPAT4
subclass of: SO_0000673
so part of: GPAT4
location: complement(join(475876..476257,476485..476563,476645..476773,477003..477088,477418..477473,477682..477797,477891..477984,478105..478194,478622..478696,478841..479138,479713..479782,480870..482014,483015..483074))
location: region:475876-483074:-1
so has part: feature:483015-483074:-1:exon
so has part: feature:480870-482014:-1:exon
so has part: feature:479713-479782:-1:exon
so has part: feature:478841-479138:-1:exon
so has part: feature:478622-478696:-1:exon
so has part: feature:478105-478194:-1:exon
so has part: feature:477891-477984:-1:exon
so has part: feature:477682-477797:-1:exon
so has part: feature:477418-477473:-1:exon
so has part: feature:477003-477088:-1:exon
so has part: feature:476645-476773:-1:exon
so has part: feature:476485-476563:-1:exon
so has part: feature:475876-476257:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:483015-483074:-1:exon

position:483015:-1
position: 483015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:480870-482014:-1:exon

position:480870:-1
position: 480870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482014:-1
position: 482014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:479713-479782:-1:exon

position:479713:-1
position: 479713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479782:-1
position: 479782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:478841-479138:-1:exon

position:478841:-1
position: 478841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479138:-1
position: 479138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:478622-478696:-1:exon

position:478622:-1
position: 478622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478696:-1
position: 478696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:478105-478194:-1:exon

position:478105:-1
position: 478105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478194:-1
position: 478194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:477891-477984:-1:exon

position:477891:-1
position: 477891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477984:-1
position: 477984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:477682-477797:-1:exon

position:477682:-1
position: 477682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477797:-1
position: 477797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:477418-477473:-1:exon

position:477418:-1
position: 477418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477473:-1
position: 477473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:477003-477088:-1:exon

position:477003:-1
position: 477003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477088:-1
position: 477088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:476645-476773:-1:exon

position:476645:-1
position: 476645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476773:-1
position: 476773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:476485-476563:-1:exon

position:476485:-1
position: 476485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476563:-1
position: 476563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:475876-476257:-1:exon

position:476257:-1
position: 476257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPAT4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: GPAT4
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: glycerol-3-phosphate acyltransferase 4
translation: MFLLLPFDSLVVNLLGISITVLFTLLLVFIIVPAIFGVSFGIRKVYMKTLLKIFQWATLRIERGAKEKNHPLYKPYVNGIIAKEPTSLEEEIKEIRRSGSGKALDTPEFELSDIFYFCRKGIETIMDDEVTKRFSAEELESWNLLSRTNYNFQYISLRLTVLWGLGVLIRYCFLLPLRIALAFTGISLLVTGTTVVGYLPNGRCKEFLSKHVHLMCYRICVRALTAIITYHDRENRPRNGGICVANHTSPIDVIILASDGYYAMVGQIHGGLMGVIQRAMVKACPHVWFERSEVKDRHLVARRLTEHVQDKSKLPILIFPEGTCINNTSVMMFKKGSFEIGATVYPVAIKYDPQFGDAFWNSSKYGMVTYLLRMMTSWAIVCSVWYMPPMTRQPEEDAVQFANRVKSAIARXGGLVDLLWDGGLKREKVKDTFKEEQQKLYSKMIVGNHEDRSRS
SIO_010081: GPAT4
subclass of: SO_0000673
so part of: GPAT4
location: complement(join(476149..476257,476485..476563,476645..476773,477003..477088,477418..477473,477682..477797,477891..477984,478105..478194,478622..478696,478841..479138,479713..479782,480870..481034))
location: region:476149-481034:-1
so has part: feature:480870-481034:-1:exon
so has part: feature:479713-479782:-1:exon
so has part: feature:478841-479138:-1:exon
so has part: feature:478622-478696:-1:exon
so has part: feature:478105-478194:-1:exon
so has part: feature:477891-477984:-1:exon
so has part: feature:477682-477797:-1:exon
so has part: feature:477418-477473:-1:exon
so has part: feature:477003-477088:-1:exon
so has part: feature:476645-476773:-1:exon
so has part: feature:476485-476563:-1:exon
so has part: feature:476149-476257:-1:exon

XP_030320051.1
type: Protein
SIO_000068: ncbiprotein

position:476149:-1
position: 476149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481034:-1
position: 481034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480870-481034:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:479713-479782:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:478841-479138:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:478622-478696:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:478105-478194:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:477891-477984:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:477682-477797:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:477418-477473:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:477003-477088:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:476645-476773:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:476485-476563:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:476149-476257:-1:exon

GINS4
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: GINS4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(483402..489870)
location: region:483402-489870:-1
so has part: feature:483402-489870:-1:exon
subclass of: SO_0000010

103535375
type: Gene
SIO_000068: ncbigene

position:483402:-1
position: 483402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489870:-1
position: 489870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483402-489870:-1:exon

GINS4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: GINS4
product: GINS complex subunit 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_030464118.1
SIO_010081: GINS4
subclass of: SO_0000673
so part of: GINS4
location: complement(join(483402..484592,487369..487475,487637..487727,487829..487917,488182..488279,488408..488521,489457..489543,489725..489853))
location: region:483402-489853:-1
so has part: feature:489725-489853:-1:exon
so has part: feature:489457-489543:-1:exon
so has part: feature:488408-488521:-1:exon
so has part: feature:488182-488279:-1:exon
so has part: feature:487829-487917:-1:exon
so has part: feature:487637-487727:-1:exon
so has part: feature:487369-487475:-1:exon
so has part: feature:483402-484592:-1:exon

position:489853:-1
position: 489853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489725-489853:-1:exon

position:489725:-1
position: 489725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:489457-489543:-1:exon

position:489457:-1
position: 489457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489543:-1
position: 489543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:488408-488521:-1:exon

position:488408:-1
position: 488408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488521:-1
position: 488521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:488182-488279:-1:exon

position:488182:-1
position: 488182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488279:-1
position: 488279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:487829-487917:-1:exon

position:487829:-1
position: 487829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487917:-1
position: 487917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:487637-487727:-1:exon

position:487637:-1
position: 487637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487727:-1
position: 487727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:487369-487475:-1:exon

position:487369:-1
position: 487369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487475:-1
position: 487475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:483402-484592:-1:exon

position:484592:-1
position: 484592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103535373
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103535373
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(483673..484586)
location: region:483673-484586:-1
so has part: feature:483673-484586:-1:exon
subclass of: SO_0000010

103535373
type: Gene
SIO_000068: ncbigene

position:483673:-1
position: 483673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484586:-1
position: 484586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483673-484586:-1:exon

LOC103535373
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103535373
product: protein phosphatase 1 regulatory subunit 3C-B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030464116.1
SIO_010081: LOC103535373
subclass of: SO_0000673
so part of: LOC103535373
location: complement(483673..484586)
location: region:483673-484586:-1
so has part: feature:483673-484586:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:483673-484586:-1:exon

LOC103535373
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103535373
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1 regulatory subunit 3C-B-like
translation: MPVDLAVRLCLSHSPPICKLLNYEELRVSRGRKPLRSCLNQKLNAEPEPERRDNTRSSRGQEKKKVVFADMKGLSLTAVRFFSKFEEDLCDLQHALSDLARCSPKMRDSEPEGCRFVLGFPQPSADYVTFRSRLHSNLVCLESCLIQDRSLSGTVKVRNIEYEKRVMVRITFDGWKNFQDVFCQYVHSTYGSADTDTFSFELTLPKPSVSCRAPAEFCIFFQCRQKTHWDNNQGNNYRICPVGTIRPPSRALRAAGRAWDHLGTSRAAALVLSQLQSWRRSESQAPYW
SIO_010081: LOC103535373
subclass of: SO_0000673
so part of: LOC103535373
location: complement(483697..484563)
location: region:483697-484563:-1
so has part: feature:483697-484563:-1:exon

XP_030319976.1
type: Protein
SIO_000068: ncbiprotein

position:483697:-1
position: 483697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484563:-1
position: 484563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483697-484563:-1:exon

GINS4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: GINS4
product: GINS complex subunit 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030464120.1
SIO_010081: GINS4
subclass of: SO_0000673
so part of: GINS4
location: complement(join(484519..484602,487369..487475,487637..487727,487829..487917,488182..488279,488408..488521,489457..489543,489725..489846))
location: region:484519-489846:-1
so has part: feature:489725-489846:-1:exon
so has part: feature:489457-489543:-1:exon
so has part: feature:488408-488521:-1:exon
so has part: feature:488182-488279:-1:exon
so has part: feature:487829-487917:-1:exon
so has part: feature:487637-487727:-1:exon
so has part: feature:487369-487475:-1:exon
so has part: feature:484519-484602:-1:exon

position:484519:-1
position: 484519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489846:-1
position: 489846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489725-489846:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:489457-489543:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:488408-488521:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:488182-488279:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:487829-487917:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:487637-487727:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:487369-487475:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:484519-484602:-1:exon

position:484602:-1
position: 484602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GINS4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: GINS4
product: GINS complex subunit 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 14 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030464117.1
SIO_010081: GINS4
subclass of: SO_0000673
so part of: GINS4
location: complement(join(486152..486555,487369..487475,487637..487727,487829..487917,488182..488279,488408..488521,489457..489543,489725..489870))
location: region:486152-489870:-1
so has part: feature:489725-489870:-1:exon
so has part: feature:489457-489543:-1:exon
so has part: feature:488408-488521:-1:exon
so has part: feature:488182-488279:-1:exon
so has part: feature:487829-487917:-1:exon
so has part: feature:487637-487727:-1:exon
so has part: feature:487369-487475:-1:exon
so has part: feature:486152-486555:-1:exon

position:486152:-1
position: 486152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489725-489870:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:489457-489543:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:488408-488521:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:488182-488279:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:487829-487917:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:487637-487727:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:487369-487475:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:486152-486555:-1:exon

position:486555:-1
position: 486555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GINS4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: GINS4
product: GINS complex subunit 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464119.1
SIO_010081: GINS4
subclass of: SO_0000673
so part of: GINS4
location: complement(join(486152..486611,487369..487475,487637..487727,487829..487917,488182..488279,488408..488521,489457..489543,489725..489846))
location: region:486152-489846:-1
so has part: feature:489725-489846:-1:exon
so has part: feature:489457-489543:-1:exon
so has part: feature:488408-488521:-1:exon
so has part: feature:488182-488279:-1:exon
so has part: feature:487829-487917:-1:exon
so has part: feature:487637-487727:-1:exon
so has part: feature:487369-487475:-1:exon
so has part: feature:486152-486611:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:489725-489846:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:489457-489543:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:488408-488521:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:488182-488279:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:487829-487917:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:487637-487727:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:487369-487475:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:486152-486611:-1:exon

position:486611:-1
position: 486611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GINS4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: GINS4
product: GINS complex subunit 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464121.1
SIO_010081: GINS4
subclass of: SO_0000673
so part of: GINS4
location: complement(join(486653..487087,487369..487475,487637..487727,487829..487917,488182..488279,488408..488521,489457..489543,489725..489846))
location: region:486653-489846:-1
so has part: feature:489725-489846:-1:exon
so has part: feature:489457-489543:-1:exon
so has part: feature:488408-488521:-1:exon
so has part: feature:488182-488279:-1:exon
so has part: feature:487829-487917:-1:exon
so has part: feature:487637-487727:-1:exon
so has part: feature:487369-487475:-1:exon
so has part: feature:486653-487087:-1:exon

position:486653:-1
position: 486653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489725-489846:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:489457-489543:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:488408-488521:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:488182-488279:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:487829-487917:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:487637-487727:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:487369-487475:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:486653-487087:-1:exon

position:487087:-1
position: 487087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GINS4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: GINS4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA replication complex GINS protein SLD5 isoform X1
translation: MSRGGMAAAGGEGTGMGMGTEAEADSDGGSEELVLTPAQLIRSLEQAWLNEKFAPELLESKPEIIECVVEQLDHMEANLKRAKRGDLKVSVHRMEVERIRYVLSSYLRCRLVKIEKFFPHVLEKEKSRAEGEPSILSPEEFAFAKEYMANTETYLKNVALKHMPPNLQKVSLLKSIPKPNLDSFVFLRVLERQENILVEPEMDEQGDYTIDLEEGSQHLIRYRAIAPLVASGAVQLI
SIO_010081: GINS4
subclass of: SO_0000673
so part of: GINS4
location: complement(join(487379..487475,487637..487727,487829..487917,488182..488279,488408..488521,489457..489543,489725..489862))
location: region:487379-489862:-1
so has part: feature:489725-489862:-1:exon
so has part: feature:489457-489543:-1:exon
so has part: feature:488408-488521:-1:exon
so has part: feature:488182-488279:-1:exon
so has part: feature:487829-487917:-1:exon
so has part: feature:487637-487727:-1:exon
so has part: feature:487379-487475:-1:exon

XP_030319977.1
type: Protein
SIO_000068: ncbiprotein

position:487379:-1
position: 487379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489862:-1
position: 489862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489725-489862:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:489457-489543:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:488408-488521:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:488182-488279:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:487829-487917:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:487637-487727:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:487379-487475:-1:exon

GINS4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: GINS4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA replication complex GINS protein SLD5 isoform X2
translation: MAAAGGEGTGMGMGTEAEADSDGGSEELVLTPAQLIRSLEQAWLNEKFAPELLESKPEIIECVVEQLDHMEANLKRAKRGDLKVSVHRMEVERIRYVLSSYLRCRLVKIEKFFPHVLEKEKSRAEGEPSILSPEEFAFAKEYMANTETYLKNVALKHMPPNLQKVSLLKSIPKPNLDSFVFLRVLERQENILVEPEMDEQGDYTIDLEEGSQHLIRYRAIAPLVASGAVQLI
SIO_010081: GINS4
subclass of: SO_0000673
so part of: GINS4
location: complement(join(487379..487475,487637..487727,487829..487917,488182..488279,488408..488521,489457..489543,489725..489847))
location: region:487379-489847:-1
so has part: feature:489725-489847:-1:exon
so has part: feature:489457-489543:-1:exon
so has part: feature:488408-488521:-1:exon
so has part: feature:488182-488279:-1:exon
so has part: feature:487829-487917:-1:exon
so has part: feature:487637-487727:-1:exon
so has part: feature:487379-487475:-1:exon

XP_030319978.1
type: Protein
SIO_000068: ncbiprotein

position:489847:-1
position: 489847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489725-489847:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:489457-489543:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:488408-488521:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:488182-488279:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:487829-487917:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:487637-487727:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:487379-487475:-1:exon

GINS4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: GINS4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA replication complex GINS protein SLD5 isoform X3
translation: MGMGTEAEADSDGGSEELVLTPAQLIRSLEQAWLNEKFAPELLESKPEIIECVVEQLDHMEANLKRAKRGDLKVSVHRMEVERIRYVLSSYLRCRLVKIEKFFPHVLEKEKSRAEGEPSILSPEEFAFAKEYMANTETYLKNVALKHMPPNLQKVSLLKSIPKPNLDSFVFLRVLERQENILVEPEMDEQGDYTIDLEEGSQHLIRYRAIAPLVASGAVQLI
SIO_010081: GINS4
subclass of: SO_0000673
so part of: GINS4
location: complement(join(487379..487475,487637..487727,487829..487917,488182..488279,488408..488521,489457..489543,489725..489817))
location: region:487379-489817:-1
so has part: feature:489725-489817:-1:exon
so has part: feature:489457-489543:-1:exon
so has part: feature:488408-488521:-1:exon
so has part: feature:488182-488279:-1:exon
so has part: feature:487829-487917:-1:exon
so has part: feature:487637-487727:-1:exon
so has part: feature:487379-487475:-1:exon

XP_030319979.1
type: Protein
SIO_000068: ncbiprotein

position:489817:-1
position: 489817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489725-489817:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:489457-489543:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:488408-488521:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:488182-488279:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:487829-487917:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:487637-487727:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:487379-487475:-1:exon

GINS4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: GINS4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA replication complex GINS protein SLD5 isoform X3
translation: MGMGTEAEADSDGGSEELVLTPAQLIRSLEQAWLNEKFAPELLESKPEIIECVVEQLDHMEANLKRAKRGDLKVSVHRMEVERIRYVLSSYLRCRLVKIEKFFPHVLEKEKSRAEGEPSILSPEEFAFAKEYMANTETYLKNVALKHMPPNLQKVSLLKSIPKPNLDSFVFLRVLERQENILVEPEMDEQGDYTIDLEEGSQHLIRYRAIAPLVASGAVQLI
SIO_010081: GINS4
subclass of: SO_0000673
so part of: GINS4
location: complement(join(487379..487475,487637..487727,487829..487917,488182..488279,488408..488521,489457..489543,489725..489817))
location: region:487379-489817:-1
so has part: feature:489725-489817:-1:exon
so has part: feature:489457-489543:-1:exon
so has part: feature:488408-488521:-1:exon
so has part: feature:488182-488279:-1:exon
so has part: feature:487829-487917:-1:exon
so has part: feature:487637-487727:-1:exon
so has part: feature:487379-487475:-1:exon

XP_030319980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:489725-489817:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:489457-489543:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:488408-488521:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:488182-488279:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:487829-487917:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:487637-487727:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:487379-487475:-1:exon

GINS4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: GINS4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA replication complex GINS protein SLD5 isoform X3
translation: MGMGTEAEADSDGGSEELVLTPAQLIRSLEQAWLNEKFAPELLESKPEIIECVVEQLDHMEANLKRAKRGDLKVSVHRMEVERIRYVLSSYLRCRLVKIEKFFPHVLEKEKSRAEGEPSILSPEEFAFAKEYMANTETYLKNVALKHMPPNLQKVSLLKSIPKPNLDSFVFLRVLERQENILVEPEMDEQGDYTIDLEEGSQHLIRYRAIAPLVASGAVQLI
SIO_010081: GINS4
subclass of: SO_0000673
so part of: GINS4
location: complement(join(487379..487475,487637..487727,487829..487917,488182..488279,488408..488521,489457..489543,489725..489817))
location: region:487379-489817:-1
so has part: feature:489725-489817:-1:exon
so has part: feature:489457-489543:-1:exon
so has part: feature:488408-488521:-1:exon
so has part: feature:488182-488279:-1:exon
so has part: feature:487829-487917:-1:exon
so has part: feature:487637-487727:-1:exon
so has part: feature:487379-487475:-1:exon

XP_030319981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:489725-489817:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:489457-489543:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:488408-488521:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:488182-488279:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:487829-487917:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:487637-487727:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:487379-487475:-1:exon

GOLGA7
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: GOLGA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(490616..494957)
location: region:490616-494957:-1
so has part: feature:490616-494957:-1:exon
subclass of: SO_0000010

103535376
type: Gene
SIO_000068: ncbigene

position:490616:-1
position: 490616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:494957:-1
position: 494957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490616-494957:-1:exon

GOLGA7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: GOLGA7
product: golgin A7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 long SRA reads, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030464135.1
SIO_010081: GOLGA7
subclass of: SO_0000673
so part of: GOLGA7
location: complement(join(490616..491837,492194..492257,492552..492653,492906..493058,494763..494957))
location: region:490616-494957:-1
so has part: feature:494763-494957:-1:exon
so has part: feature:492906-493058:-1:exon
so has part: feature:492552-492653:-1:exon
so has part: feature:492194-492257:-1:exon
so has part: feature:490616-491837:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:494763-494957:-1:exon

position:494763:-1
position: 494763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:492906-493058:-1:exon

position:492906:-1
position: 492906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:493058:-1
position: 493058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:492552-492653:-1:exon

position:492552:-1
position: 492552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:492653:-1
position: 492653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:492194-492257:-1:exon

position:492194:-1
position: 492194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:492257:-1
position: 492257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:490616-491837:-1:exon

position:491837:-1
position: 491837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GOLGA7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: GOLGA7
product: golgin A7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030464136.1
SIO_010081: GOLGA7
subclass of: SO_0000673
so part of: GOLGA7
location: complement(join(490616..491840,492194..492257,492552..492653,492906..493058,494763..494954))
location: region:490616-494954:-1
so has part: feature:494763-494954:-1:exon
so has part: feature:492906-493058:-1:exon
so has part: feature:492552-492653:-1:exon
so has part: feature:492194-492257:-1:exon
so has part: feature:490616-491840:-1:exon

position:494954:-1
position: 494954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494763-494954:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:492906-493058:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:492552-492653:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:492194-492257:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:490616-491840:-1:exon

position:491840:-1
position: 491840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GOLGA7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: GOLGA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily A member 7
translation: MRPQQAPVSGKVFIQRDYSGGTRCQFQSKFPAELENRIDRQQFEETVRTLNNLYAEAEKLGGQSYLEGCLACLTAYTIFLCMETHYEKVLKKIAKFIQEQNEKIYAPQGLLLTDPIERGLRVIEITIYEDRGMSSGR
SIO_010081: GOLGA7
subclass of: SO_0000673
so part of: GOLGA7
location: complement(join(492210..492257,492552..492653,492906..493058,494763..494873))
location: region:492210-494873:-1
so has part: feature:494763-494873:-1:exon
so has part: feature:492906-493058:-1:exon
so has part: feature:492552-492653:-1:exon
so has part: feature:492210-492257:-1:exon

XP_030319995.1
type: Protein
SIO_000068: ncbiprotein

position:492210:-1
position: 492210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:494873:-1
position: 494873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494763-494873:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:492906-493058:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:492552-492653:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:492210-492257:-1:exon

GOLGA7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: GOLGA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily A member 7
translation: MRPQQAPVSGKVFIQRDYSGGTRCQFQSKFPAELENRIDRQQFEETVRTLNNLYAEAEKLGGQSYLEGCLACLTAYTIFLCMETHYEKVLKKIAKFIQEQNEKIYAPQGLLLTDPIERGLRVIEITIYEDRGMSSGR
SIO_010081: GOLGA7
subclass of: SO_0000673
so part of: GOLGA7
location: complement(join(492210..492257,492552..492653,492906..493058,494763..494873))
location: region:492210-494873:-1
so has part: feature:494763-494873:-1:exon
so has part: feature:492906-493058:-1:exon
so has part: feature:492552-492653:-1:exon
so has part: feature:492210-492257:-1:exon

XP_030319996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:494763-494873:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:492906-493058:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:492552-492653:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:492210-492257:-1:exon

SFRP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SFRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 508477..520747
location: region:508477-520747:1
so has part: feature:508477-520747:1:exon
subclass of: SO_0000010

103535377
type: Gene
SIO_000068: ncbigene

position:508477:1
position: 508477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520747:1
position: 520747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508477-520747:1:exon

SFRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SFRP1
product: secreted frizzled related protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 15 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_008501425.2
SIO_010081: SFRP1
subclass of: SO_0000673
so part of: SFRP1
location: join(508477..509027,513395..513472,520243..520747)
location: region:508477-520747:1
so has part: feature:508477-509027:1:exon
so has part: feature:513395-513472:1:exon
so has part: feature:520243-520747:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:508477-509027:1:exon

position:509027:1
position: 509027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:513395-513472:1:exon

position:513395:1
position: 513395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513472:1
position: 513472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:520243-520747:1:exon

position:520243:1
position: 520243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SFRP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SFRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: secreted frizzled-related protein 1
translation: MGGVRGPHRAALRALVSLAVGLLASGGASEYDYVSYQSDLGPYPGGRFYAKPHQCVAIPADLRLCHSVGYDKMVLPNLLDHETMAEVKHQASSWVPLLNKNCHMGTQVFLCSLFAPVCLDRPVYPCRWLCEAVRDSCEPVMQFFGFFWPEMLKCDQFPQDDVCIAMTAPNATEVSRPKGTNVCPPCDNEMKSEAIVEHLCASEFALKMTIKEVKRENGDKMIIPRKRKALKLGPIRKKNLKKLVLFLKNGADCPCHQLDNLGHYFLIMGRQVKTQYLLTAIYKWDKKNKEFKKFMKKMKSPDCPTFPSVFK
SIO_010081: SFRP1
subclass of: SO_0000673
so part of: SFRP1
location: join(508493..509027,513395..513472,520243..520565)
location: region:508493-520565:1
so has part: feature:508493-509027:1:exon
so has part: feature:513395-513472:1:exon
so has part: feature:520243-520565:1:exon

XP_008499647.2
type: Protein
SIO_000068: ncbiprotein

position:508493:1
position: 508493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520565:1
position: 520565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508493-509027:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:513395-513472:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:520243-520565:1:exon

ZMAT4
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ZMAT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 547484..594810
location: region:547484-594810:1
so has part: feature:547484-594810:1:exon
subclass of: SO_0000010

103535362
type: Gene
SIO_000068: ncbigene

position:547484:1
position: 547484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594810:1
position: 594810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547484-594810:1:exon

ZMAT4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ZMAT4
product: zinc finger matrin-type 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030464173.1
SIO_010081: ZMAT4
subclass of: SO_0000673
so part of: ZMAT4
location: join(547484..547617,561328..561429,573802..573891,579511..579667,583210..583437,589882..589978,594368..594810)
location: region:547484-594810:1
so has part: feature:547484-547617:1:exon
so has part: feature:561328-561429:1:exon
so has part: feature:573802-573891:1:exon
so has part: feature:579511-579667:1:exon
so has part: feature:583210-583437:1:exon
so has part: feature:589882-589978:1:exon
so has part: feature:594368-594810:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:547484-547617:1:exon

position:547617:1
position: 547617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:561328-561429:1:exon

position:561328:1
position: 561328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561429:1
position: 561429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:573802-573891:1:exon

position:573802:1
position: 573802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573891:1
position: 573891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:579511-579667:1:exon

position:579511:1
position: 579511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579667:1
position: 579667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:583210-583437:1:exon

position:583210:1
position: 583210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583437:1
position: 583437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:589882-589978:1:exon

position:589882:1
position: 589882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:589978:1
position: 589978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:594368-594810:1:exon

position:594368:1
position: 594368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZMAT4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ZMAT4
product: zinc finger matrin-type 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464174.1
SIO_010081: ZMAT4
subclass of: SO_0000673
so part of: ZMAT4
location: join(548553..548797,561328..561429,573802..573891,579511..579667,583210..583437,589882..589978,594368..594810)
location: region:548553-594810:1
so has part: feature:548553-548797:1:exon
so has part: feature:561328-561429:1:exon
so has part: feature:573802-573891:1:exon
so has part: feature:579511-579667:1:exon
so has part: feature:583210-583437:1:exon
so has part: feature:589882-589978:1:exon
so has part: feature:594368-594810:1:exon

position:548553:1
position: 548553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548553-548797:1:exon

position:548797:1
position: 548797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:561328-561429:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:573802-573891:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:579511-579667:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:583210-583437:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:589882-589978:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:594368-594810:1:exon

ZMAT4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ZMAT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger matrin-type protein 4
translation: MKSSDIDQELFTESYCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPLDGGCPAKKLRSENGSDGDSVDKNKCCTLCNMSFTSAVVAESHYQGKIHAKRLKLLLGEQPALKATESTLSSLKQPHTGSAPVVPSPHPRRDSDRFCQLCAAWFNNPLMAQQHYDGKKHKKNAARADLLEQLGKTLDLGELRGLKRSYTCNICKVTLNSIEQYHAHLKGSKHQTNLKNQ
SIO_010081: ZMAT4
subclass of: SO_0000673
so part of: ZMAT4
location: join(561328..561429,573802..573891,579511..579667,583210..583437,589882..589978,594368..594383)
location: region:561328-594383:1
so has part: feature:561328-561429:1:exon
so has part: feature:573802-573891:1:exon
so has part: feature:579511-579667:1:exon
so has part: feature:583210-583437:1:exon
so has part: feature:589882-589978:1:exon
so has part: feature:594368-594383:1:exon

XP_030320033.1
type: Protein
SIO_000068: ncbiprotein

position:594383:1
position: 594383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:561328-561429:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:573802-573891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:579511-579667:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:583210-583437:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:589882-589978:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:594368-594383:1:exon

ZMAT4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ZMAT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger matrin-type protein 4
translation: MKSSDIDQELFTESYCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPLDGGCPAKKLRSENGSDGDSVDKNKCCTLCNMSFTSAVVAESHYQGKIHAKRLKLLLGEQPALKATESTLSSLKQPHTGSAPVVPSPHPRRDSDRFCQLCAAWFNNPLMAQQHYDGKKHKKNAARADLLEQLGKTLDLGELRGLKRSYTCNICKVTLNSIEQYHAHLKGSKHQTNLKNQ
SIO_010081: ZMAT4
subclass of: SO_0000673
so part of: ZMAT4
location: join(561328..561429,573802..573891,579511..579667,583210..583437,589882..589978,594368..594383)
location: region:561328-594383:1
so has part: feature:561328-561429:1:exon
so has part: feature:573802-573891:1:exon
so has part: feature:579511-579667:1:exon
so has part: feature:583210-583437:1:exon
so has part: feature:589882-589978:1:exon
so has part: feature:594368-594383:1:exon

XP_030320034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:561328-561429:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:573802-573891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:579511-579667:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:583210-583437:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:589882-589978:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:594368-594383:1:exon

ADAM9
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ADAM9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(626950..650207)
location: region:626950-650207:-1
so has part: feature:626950-650207:-1:exon
subclass of: SO_0000010

103535379
type: Gene
SIO_000068: ncbigene

position:626950:-1
position: 626950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:650207:-1
position: 650207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:626950-650207:-1:exon

ADAM9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ADAM9
product: ADAM metallopeptidase domain 9, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 1 long SRA read, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030464009.1
SIO_010081: ADAM9
subclass of: SO_0000673
so part of: ADAM9
location: complement(join(626950..627597,628342..628493,629065..629164,629616..629754,630757..630862,631691..631771,632376..632559,633034..633139,633635..633830,634039..634131,634250..634421,634642..634775,635510..635591,636751..636920,637129..637200,637567..637632,638389..638578,639320..639396,641143..641221,642250..642314,643223..643320,650043..650207))
location: region:626950-650207:-1
so has part: feature:650043-650207:-1:exon
so has part: feature:643223-643320:-1:exon
so has part: feature:642250-642314:-1:exon
so has part: feature:641143-641221:-1:exon
so has part: feature:639320-639396:-1:exon
so has part: feature:638389-638578:-1:exon
so has part: feature:637567-637632:-1:exon
so has part: feature:637129-637200:-1:exon
so has part: feature:636751-636920:-1:exon
so has part: feature:635510-635591:-1:exon
so has part: feature:634642-634775:-1:exon
so has part: feature:634250-634421:-1:exon
so has part: feature:634039-634131:-1:exon
so has part: feature:633635-633830:-1:exon
so has part: feature:633034-633139:-1:exon
so has part: feature:632376-632559:-1:exon
so has part: feature:631691-631771:-1:exon
so has part: feature:630757-630862:-1:exon
so has part: feature:629616-629754:-1:exon
so has part: feature:629065-629164:-1:exon
so has part: feature:628342-628493:-1:exon
so has part: feature:626950-627597:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:650043-650207:-1:exon

position:650043:-1
position: 650043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:643223-643320:-1:exon

position:643223:-1
position: 643223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:643320:-1
position: 643320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:642250-642314:-1:exon

position:642250:-1
position: 642250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:642314:-1
position: 642314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:641143-641221:-1:exon

position:641143:-1
position: 641143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641221:-1
position: 641221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:639320-639396:-1:exon

position:639320:-1
position: 639320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:639396:-1
position: 639396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:638389-638578:-1:exon

position:638389:-1
position: 638389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638578:-1
position: 638578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:637567-637632:-1:exon

position:637567:-1
position: 637567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:637632:-1
position: 637632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:637129-637200:-1:exon

position:637129:-1
position: 637129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:637200:-1
position: 637200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:636751-636920:-1:exon

position:636751:-1
position: 636751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636920:-1
position: 636920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:635510-635591:-1:exon

position:635510:-1
position: 635510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:635591:-1
position: 635591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:634642-634775:-1:exon

position:634642:-1
position: 634642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:634775:-1
position: 634775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:634250-634421:-1:exon

position:634250:-1
position: 634250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:634421:-1
position: 634421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:634039-634131:-1:exon

position:634039:-1
position: 634039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:634131:-1
position: 634131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:633635-633830:-1:exon

position:633635:-1
position: 633635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:633830:-1
position: 633830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:633034-633139:-1:exon

position:633034:-1
position: 633034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:633139:-1
position: 633139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:632376-632559:-1:exon

position:632376:-1
position: 632376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:632559:-1
position: 632559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:631691-631771:-1:exon

position:631691:-1
position: 631691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:631771:-1
position: 631771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:630757-630862:-1:exon

position:630757:-1
position: 630757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:630862:-1
position: 630862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:629616-629754:-1:exon

position:629616:-1
position: 629616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:629754:-1
position: 629754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:629065-629164:-1:exon

position:629065:-1
position: 629065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:629164:-1
position: 629164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:628342-628493:-1:exon

position:628342:-1
position: 628342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:628493:-1
position: 628493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:626950-627597:-1:exon

position:627597:-1
position: 627597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADAM9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ADAM9
product: ADAM metallopeptidase domain 9, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030464011.1
SIO_010081: ADAM9
subclass of: SO_0000673
so part of: ADAM9
location: complement(join(626950..627597,628342..628493,629616..629754,630757..630862,631691..631771,632376..632559,633034..633139,633635..633830,634039..634131,634250..634421,634642..634775,635510..635591,636751..636920,637129..637200,637567..637632,638389..638578,639320..639396,641143..641221,642250..642314,643223..643320,650043..650199))
location: region:626950-650199:-1
so has part: feature:650043-650199:-1:exon
so has part: feature:643223-643320:-1:exon
so has part: feature:642250-642314:-1:exon
so has part: feature:641143-641221:-1:exon
so has part: feature:639320-639396:-1:exon
so has part: feature:638389-638578:-1:exon
so has part: feature:637567-637632:-1:exon
so has part: feature:637129-637200:-1:exon
so has part: feature:636751-636920:-1:exon
so has part: feature:635510-635591:-1:exon
so has part: feature:634642-634775:-1:exon
so has part: feature:634250-634421:-1:exon
so has part: feature:634039-634131:-1:exon
so has part: feature:633635-633830:-1:exon
so has part: feature:633034-633139:-1:exon
so has part: feature:632376-632559:-1:exon
so has part: feature:631691-631771:-1:exon
so has part: feature:630757-630862:-1:exon
so has part: feature:629616-629754:-1:exon
so has part: feature:628342-628493:-1:exon
so has part: feature:626950-627597:-1:exon

position:650199:-1
position: 650199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:650043-650199:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:643223-643320:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:642250-642314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:641143-641221:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:639320-639396:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638389-638578:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637567-637632:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637129-637200:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636751-636920:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:635510-635591:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:634642-634775:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:634250-634421:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:634039-634131:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:633635-633830:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:633034-633139:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:632376-632559:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:631691-631771:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:630757-630862:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:629616-629754:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:628342-628493:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:626950-627597:-1:exon

ADAM9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ADAM9
product: ADAM metallopeptidase domain 9, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464012.1
SIO_010081: ADAM9
subclass of: SO_0000673
so part of: ADAM9
location: complement(join(626950..627597,628342..628493,629065..629164,629616..629754,630757..630862,631691..631771,632376..632469,633034..633139,633635..633830,634039..634131,634250..634421,634642..634775,635510..635591,636751..636920,637129..637200,637567..637632,638389..638578,639320..639396,641143..641221,642250..642314,643223..643320,650043..650198))
location: region:626950-650198:-1
so has part: feature:650043-650198:-1:exon
so has part: feature:643223-643320:-1:exon
so has part: feature:642250-642314:-1:exon
so has part: feature:641143-641221:-1:exon
so has part: feature:639320-639396:-1:exon
so has part: feature:638389-638578:-1:exon
so has part: feature:637567-637632:-1:exon
so has part: feature:637129-637200:-1:exon
so has part: feature:636751-636920:-1:exon
so has part: feature:635510-635591:-1:exon
so has part: feature:634642-634775:-1:exon
so has part: feature:634250-634421:-1:exon
so has part: feature:634039-634131:-1:exon
so has part: feature:633635-633830:-1:exon
so has part: feature:633034-633139:-1:exon
so has part: feature:632376-632469:-1:exon
so has part: feature:631691-631771:-1:exon
so has part: feature:630757-630862:-1:exon
so has part: feature:629616-629754:-1:exon
so has part: feature:629065-629164:-1:exon
so has part: feature:628342-628493:-1:exon
so has part: feature:626950-627597:-1:exon

position:650198:-1
position: 650198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:650043-650198:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:643223-643320:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:642250-642314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:641143-641221:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:639320-639396:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638389-638578:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637567-637632:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637129-637200:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636751-636920:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:635510-635591:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:634642-634775:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:634250-634421:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:634039-634131:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:633635-633830:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:633034-633139:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:632376-632469:-1:exon

position:632469:-1
position: 632469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:631691-631771:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:630757-630862:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:629616-629754:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:629065-629164:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:628342-628493:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:626950-627597:-1:exon

ADAM9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ADAM9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disintegrin and metalloproteinase domain-containing protein 9 isoform X2
translation: MRTPGAMAWAVRSCLCLLLLAVPGQPGRAGFQQVSLLSSYEVVIPQKLGRERREASSVSSAQDKVSYGVQIEGKEYTIHLEKNKELLPKDFTVYTYNKEGKLQSENPDVQDHCHYQGYVEGSLDSVVAVSTCSGLRGLVTIENITYGIEPMDPSSGSEHILYRLDNVKKEPTTCGVTPEDHEREHTEENQHPSMTQLLRRKRAVLHQTRYVELFIVVDKEKFEDFGKSETEVREHMVQLANFLDSMYIMLNIRIVLVGLEIWKYENIISTDGGAGDVLANFVQWREKNLVLRRRHDSAQFVLKKGFGGTAGMAYVGTVCSKSHAGGINVFGRISIQMFASIMAHELGHNLGMNHDDERVCHCGASSCIMSSGASGSRNFSSCSAEDFEKLTLNKGGSCLLNVPRPDETYSVPYCGNRLVDAGEECDCGSPKECESDPCCEPGTCRLRSGAACAYGDCCKNCQLLPAGTECRASNNECDLPEYCNGTSQFCQPDFTVQNGHPCHQEEAYCYNGVCQYYDAQCQDIFGSKAKAAPNICFDEVNSKGDRFGNCGYHGHDYKKCSSSNAMCGKLQCENVKTMPVFGIKPAIIQTPIRGTTCWGVDFQLGSDVPDPGMVNEGTKCGNGKVCRHFQCVSASVLNYDCDVERQCHGHGVCNNNRSCHCEAGWAPPYCDTKGYGGSMESGPPYNDKDTSLRDGLLVFFFLILPLLIAAALAFAKRDRLKRCFRRLMSRCHSIWSQIPFLFHLTQLTSTLSRLTTSPTTHPTTSPTTHHHSTRHSSHRSCPQGHHLHYRNVCLRDLLHHSKNVYLRDSIFPLDLHLCLPNSFLASLGSCCELRQS
SIO_010081: ADAM9
subclass of: SO_0000673
so part of: ADAM9
location: complement(join(627437..627597,628342..628493,629616..629754,630757..630862,631691..631771,632376..632559,633034..633139,633635..633830,634039..634131,634250..634421,634642..634775,635510..635591,636751..636920,637129..637200,637567..637632,638389..638578,639320..639396,641143..641221,642250..642314,643223..643320,650043..650130))
location: region:627437-650130:-1
so has part: feature:650043-650130:-1:exon
so has part: feature:643223-643320:-1:exon
so has part: feature:642250-642314:-1:exon
so has part: feature:641143-641221:-1:exon
so has part: feature:639320-639396:-1:exon
so has part: feature:638389-638578:-1:exon
so has part: feature:637567-637632:-1:exon
so has part: feature:637129-637200:-1:exon
so has part: feature:636751-636920:-1:exon
so has part: feature:635510-635591:-1:exon
so has part: feature:634642-634775:-1:exon
so has part: feature:634250-634421:-1:exon
so has part: feature:634039-634131:-1:exon
so has part: feature:633635-633830:-1:exon
so has part: feature:633034-633139:-1:exon
so has part: feature:632376-632559:-1:exon
so has part: feature:631691-631771:-1:exon
so has part: feature:630757-630862:-1:exon
so has part: feature:629616-629754:-1:exon
so has part: feature:628342-628493:-1:exon
so has part: feature:627437-627597:-1:exon

XP_030319871.1
type: Protein
SIO_000068: ncbiprotein

position:627437:-1
position: 627437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:650130:-1
position: 650130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:650043-650130:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:643223-643320:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:642250-642314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:641143-641221:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:639320-639396:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638389-638578:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637567-637632:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637129-637200:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636751-636920:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:635510-635591:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:634642-634775:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:634250-634421:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:634039-634131:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:633635-633830:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:633034-633139:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:632376-632559:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:631691-631771:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:630757-630862:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:629616-629754:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:628342-628493:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:627437-627597:-1:exon

ADAM9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ADAM9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disintegrin and metalloproteinase domain-containing protein 9 isoform X3
translation: MRTPGAMAWAVRSCLCLLLLAVPGQPGRAGFQQVSLLSSYEVVIPQKLGRERREASSVSSAQDKVSYGVQIEGKEYTIHLEKNKELLPKDFTVYTYNKEGKLQSENPDVQDHCHYQGYVEGSLDSVVAVSTCSGLRGLVTIENITYGIEPMDPSSGSEHILYRLDNVKKEPTTCGVTPEDHEREHTEENQHPSMTQLLRRKRAVLHQTRYVELFIVVDKEKFEDFGKSETEVREHMVQLANFLDSMYIMLNIRIVLVGLEIWKYENIISTDGGAGDVLANFVQWREKNLVLRRRHDSAQFVLKKGFGGTAGMAYVGTVCSKSHAGGINVFGRISIQMFASIMAHELGHNLGMNHDDERVCHCGASSCIMSSGASGSRNFSSCSAEDFEKLTLNKGGSCLLNVPRPDETYSVPYCGNRLVDAGEECDCGSPKECESDPCCEPGTCRLRSGAACAYGDCCKNCQLLPAGTECRASNNECDLPEYCNGTSQFCQPDFTVQNGHPCHQEEAYCYNGVCQYYDAQCQDIFGSKAKAAPNICFDEVNSKGDRFGNCGYHGHDYKKCSSSGTTCWGVDFQLGSDVPDPGMVNEGTKCGNGKVCRHFQCVSASVLNYDCDVERQCHGHGVCNNNRSCHCEAGWAPPYCDTKGYGGSMESGPPYNDKDTSLRDGLLVFFFLILPLLIAAALAFAKRDRLKRCFRRLMSRCHSSLQSPPPRTETEQRDHHRGFSHGMPYPPRGVPTDMEPNTFPVPSYPVNQHPQQAYHQPYYPSYHQPYYPSPQYQAQQPQKLPTRPPPPLQKCVPQGPPPPQQKCLPQGQYFPSRPAPLPPK
SIO_010081: ADAM9
subclass of: SO_0000673
so part of: ADAM9
location: complement(join(627483..627597,628342..628493,629065..629164,629616..629754,630757..630862,631691..631771,632376..632469,633034..633139,633635..633830,634039..634131,634250..634421,634642..634775,635510..635591,636751..636920,637129..637200,637567..637632,638389..638578,639320..639396,641143..641221,642250..642314,643223..643320,650043..650130))
location: region:627483-650130:-1
so has part: feature:650043-650130:-1:exon
so has part: feature:643223-643320:-1:exon
so has part: feature:642250-642314:-1:exon
so has part: feature:641143-641221:-1:exon
so has part: feature:639320-639396:-1:exon
so has part: feature:638389-638578:-1:exon
so has part: feature:637567-637632:-1:exon
so has part: feature:637129-637200:-1:exon
so has part: feature:636751-636920:-1:exon
so has part: feature:635510-635591:-1:exon
so has part: feature:634642-634775:-1:exon
so has part: feature:634250-634421:-1:exon
so has part: feature:634039-634131:-1:exon
so has part: feature:633635-633830:-1:exon
so has part: feature:633034-633139:-1:exon
so has part: feature:632376-632469:-1:exon
so has part: feature:631691-631771:-1:exon
so has part: feature:630757-630862:-1:exon
so has part: feature:629616-629754:-1:exon
so has part: feature:629065-629164:-1:exon
so has part: feature:628342-628493:-1:exon
so has part: feature:627483-627597:-1:exon

XP_030319872.1
type: Protein
SIO_000068: ncbiprotein

position:627483:-1
position: 627483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:650043-650130:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:643223-643320:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:642250-642314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:641143-641221:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:639320-639396:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638389-638578:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637567-637632:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637129-637200:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636751-636920:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:635510-635591:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:634642-634775:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:634250-634421:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:634039-634131:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:633635-633830:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:633034-633139:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:632376-632469:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:631691-631771:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:630757-630862:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:629616-629754:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:629065-629164:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:628342-628493:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:627483-627597:-1:exon

ADAM9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ADAM9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disintegrin and metalloproteinase domain-containing protein 9 isoform X1
translation: MRTPGAMAWAVRSCLCLLLLAVPGQPGRAGFQQVSLLSSYEVVIPQKLGRERREASSVSSAQDKVSYGVQIEGKEYTIHLEKNKELLPKDFTVYTYNKEGKLQSENPDVQDHCHYQGYVEGSLDSVVAVSTCSGLRGLVTIENITYGIEPMDPSSGSEHILYRLDNVKKEPTTCGVTPEDHEREHTEENQHPSMTQLLRRKRAVLHQTRYVELFIVVDKEKFEDFGKSETEVREHMVQLANFLDSMYIMLNIRIVLVGLEIWKYENIISTDGGAGDVLANFVQWREKNLVLRRRHDSAQFVLKKGFGGTAGMAYVGTVCSKSHAGGINVFGRISIQMFASIMAHELGHNLGMNHDDERVCHCGASSCIMSSGASGSRNFSSCSAEDFEKLTLNKGGSCLLNVPRPDETYSVPYCGNRLVDAGEECDCGSPKECESDPCCEPGTCRLRSGAACAYGDCCKNCQLLPAGTECRASNNECDLPEYCNGTSQFCQPDFTVQNGHPCHQEEAYCYNGVCQYYDAQCQDIFGSKAKAAPNICFDEVNSKGDRFGNCGYHGHDYKKCSSSNAMCGKLQCENVKTMPVFGIKPAIIQTPIRGTTCWGVDFQLGSDVPDPGMVNEGTKCGNGKVCRHFQCVSASVLNYDCDVERQCHGHGVCNNNRSCHCEAGWAPPYCDTKGYGGSMESGPPYNDKDTSLRDGLLVFFFLILPLLIAAALAFAKRDRLKRCFRRLMSRCHSSLQSPPPRTETEQRDHHRGFSHGMPYPPRGVPTDMEPNTFPVPSYPVNQHPQQAYHQPYYPSYHQPYYPSPQYQAQQPQKLPTRPPPPLQKCVPQGPPPPQQKCLPQGQYFPSRPAPLPPK
SIO_010081: ADAM9
subclass of: SO_0000673
so part of: ADAM9
location: complement(join(627483..627597,628342..628493,629065..629164,629616..629754,630757..630862,631691..631771,632376..632559,633034..633139,633635..633830,634039..634131,634250..634421,634642..634775,635510..635591,636751..636920,637129..637200,637567..637632,638389..638578,639320..639396,641143..641221,642250..642314,643223..643320,650043..650130))
location: region:627483-650130:-1
so has part: feature:650043-650130:-1:exon
so has part: feature:643223-643320:-1:exon
so has part: feature:642250-642314:-1:exon
so has part: feature:641143-641221:-1:exon
so has part: feature:639320-639396:-1:exon
so has part: feature:638389-638578:-1:exon
so has part: feature:637567-637632:-1:exon
so has part: feature:637129-637200:-1:exon
so has part: feature:636751-636920:-1:exon
so has part: feature:635510-635591:-1:exon
so has part: feature:634642-634775:-1:exon
so has part: feature:634250-634421:-1:exon
so has part: feature:634039-634131:-1:exon
so has part: feature:633635-633830:-1:exon
so has part: feature:633034-633139:-1:exon
so has part: feature:632376-632559:-1:exon
so has part: feature:631691-631771:-1:exon
so has part: feature:630757-630862:-1:exon
so has part: feature:629616-629754:-1:exon
so has part: feature:629065-629164:-1:exon
so has part: feature:628342-628493:-1:exon
so has part: feature:627483-627597:-1:exon

XP_030319869.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:650043-650130:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:643223-643320:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:642250-642314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:641143-641221:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:639320-639396:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638389-638578:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637567-637632:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637129-637200:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636751-636920:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:635510-635591:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:634642-634775:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:634250-634421:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:634039-634131:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:633635-633830:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:633034-633139:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:632376-632559:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:631691-631771:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:630757-630862:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:629616-629754:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:629065-629164:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:628342-628493:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:627483-627597:-1:exon

TM2D2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: TM2D2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 655711..657536
location: region:655711-657536:1
so has part: feature:655711-657536:1:exon
subclass of: SO_0000010

103535380
type: Gene
SIO_000068: ncbigene

position:655711:1
position: 655711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:657536:1
position: 657536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:655711-657536:1:exon

TM2D2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TM2D2
product: TM2 domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 2 ESTs, 1 long SRA read, 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030464056.1
SIO_010081: TM2D2
subclass of: SO_0000673
so part of: TM2D2
location: join(655711..655946,656026..656113,656231..656346,656719..657536)
location: region:655711-657536:1
so has part: feature:655711-655946:1:exon
so has part: feature:656026-656113:1:exon
so has part: feature:656231-656346:1:exon
so has part: feature:656719-657536:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:655711-655946:1:exon

position:655946:1
position: 655946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:656026-656113:1:exon

position:656026:1
position: 656026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:656113:1
position: 656113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:656231-656346:1:exon

position:656231:1
position: 656231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:656346:1
position: 656346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:656719-657536:1:exon

position:656719:1
position: 656719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TM2D2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TM2D2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TM2 domain-containing protein 2
translation: MAPGRAGPVGYALLCGQAALLLGNVLLLHGASRAAPRNASDNDGLVPGPPGAAWAYTDPQSPLVLCTYLPEEFVECEEPVDHGGNATAQQELGHGCVKFGGQAYGEVDHTRVQCRALDGIECAEPRSFLRGGRPCVKYTGHYFITTLLYSVFLGGFGVDRFCLGHTGTAVGKLLTLGGLGIWWFVDLILLITGGLMPSDGSNWCTVY
SIO_010081: TM2D2
subclass of: SO_0000673
so part of: TM2D2
location: join(655741..655946,656026..656113,656231..656346,656719..656932)
location: region:655741-656932:1
so has part: feature:655741-655946:1:exon
so has part: feature:656026-656113:1:exon
so has part: feature:656231-656346:1:exon
so has part: feature:656719-656932:1:exon

XP_030319916.1
type: Protein
SIO_000068: ncbiprotein

position:655741:1
position: 655741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:656932:1
position: 656932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:655741-655946:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:656026-656113:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:656231-656346:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:656719-656932:1:exon

PLEKHA2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PLEKHA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(660856..673155)
location: region:660856-673155:-1
so has part: feature:660856-673155:-1:exon
subclass of: SO_0000010

103535381
type: Gene
SIO_000068: ncbigene

position:660856:-1
position: 660856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673155:-1
position: 673155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660856-673155:-1:exon

PLEKHA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PLEKHA2
product: pleckstrin homology domain containing A2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464036.1
SIO_010081: PLEKHA2
subclass of: SO_0000673
so part of: PLEKHA2
location: complement(join(660856..661176,661557..661634,662058..662121,662792..662862,663011..663079,663220..663366,665198..665338,666657..666754,667705..667753,668825..668881,669425..669588,673078..673155))
location: region:660856-673155:-1
so has part: feature:673078-673155:-1:exon
so has part: feature:669425-669588:-1:exon
so has part: feature:668825-668881:-1:exon
so has part: feature:667705-667753:-1:exon
so has part: feature:666657-666754:-1:exon
so has part: feature:665198-665338:-1:exon
so has part: feature:663220-663366:-1:exon
so has part: feature:663011-663079:-1:exon
so has part: feature:662792-662862:-1:exon
so has part: feature:662058-662121:-1:exon
so has part: feature:661557-661634:-1:exon
so has part: feature:660856-661176:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:673078-673155:-1:exon

position:673078:-1
position: 673078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:669425-669588:-1:exon

position:669425:-1
position: 669425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:669588:-1
position: 669588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:668825-668881:-1:exon

position:668825:-1
position: 668825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668881:-1
position: 668881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:667705-667753:-1:exon

position:667705:-1
position: 667705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667753:-1
position: 667753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:666657-666754:-1:exon

position:666657:-1
position: 666657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666754:-1
position: 666754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:665198-665338:-1:exon

position:665198:-1
position: 665198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665338:-1
position: 665338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:663220-663366:-1:exon

position:663220:-1
position: 663220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663366:-1
position: 663366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:663011-663079:-1:exon

position:663011:-1
position: 663011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663079:-1
position: 663079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:662792-662862:-1:exon

position:662792:-1
position: 662792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:662862:-1
position: 662862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:662058-662121:-1:exon

position:662058:-1
position: 662058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:662121:-1
position: 662121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:661557-661634:-1:exon

position:661557:-1
position: 661557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661634:-1
position: 661634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:660856-661176:-1:exon

position:661176:-1
position: 661176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLEKHA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PLEKHA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology domain-containing family A member 2
translation: MPYLDRQNRICGFLDIEENETCGKFLRRYFILDTQANCLLWYMDNPQNLAIGAGAVGSLQLTYISKVSIATPKQKPKTPFCFVINALSQRYFLQASDQQDLQDWVEALNRASKITVPKGGSVPPATEIAKPPVLPQAQERKPQVAYKTEIIGGVVVHTPINQNGGDGGEGSEGVPHPLLRRSQSHIPSSGAKPPTGPPVLKSGYCVKQGNVRKSWKRRYFVLDEFSISYYKCEQDKEPLRAILLKDICKTHECLVKSGDLLMRDNLFEIITNSRTFYIQADSPEDMYSWIRAISGAVQALKSRPREMSFMRSTSVARPGGSPGPSQQRRALCQAPSTSSWQPWTPVPRAEGQRVVPEELPVPLGDSVFLPAGTAPGRRLRHKSEPQHLKEKPFPFDLDDESIRTSDV
SIO_010081: PLEKHA2
subclass of: SO_0000673
so part of: PLEKHA2
location: complement(join(660868..661176,661557..661634,662058..662121,662792..662862,663011..663079,663220..663366,665198..665338,666657..666754,667705..667753,668825..668881,669425..669565))
location: region:660868-669565:-1
so has part: feature:669425-669565:-1:exon
so has part: feature:668825-668881:-1:exon
so has part: feature:667705-667753:-1:exon
so has part: feature:666657-666754:-1:exon
so has part: feature:665198-665338:-1:exon
so has part: feature:663220-663366:-1:exon
so has part: feature:663011-663079:-1:exon
so has part: feature:662792-662862:-1:exon
so has part: feature:662058-662121:-1:exon
so has part: feature:661557-661634:-1:exon
so has part: feature:660868-661176:-1:exon

XP_030319896.1
type: Protein
SIO_000068: ncbiprotein

position:660868:-1
position: 660868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:669565:-1
position: 669565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:669425-669565:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:668825-668881:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:667705-667753:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:666657-666754:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:665198-665338:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:663220-663366:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:663011-663079:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:662792-662862:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:662058-662121:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:661557-661634:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:660868-661176:-1:exon

TACC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: TACC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(680059..697433)
location: region:680059-697433:-1
so has part: feature:680059-697433:-1:exon
subclass of: SO_0000010

103535382
type: Gene
SIO_000068: ncbigene

position:680059:-1
position: 680059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:697433:-1
position: 697433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:680059-697433:-1:exon

TACC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TACC1
product: transforming acidic coiled-coil containing protein 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030464014.1
SIO_010081: TACC1
subclass of: SO_0000673
so part of: TACC1
location: complement(join(680059..682631,682988..683108,683738..683844,684113..684273,684374..684417,684564..684640,684751..684885,686295..686350,687473..687668,687856..687916,690492..691526,696612..696727,697270..697433))
location: region:680059-697433:-1
so has part: feature:697270-697433:-1:exon
so has part: feature:696612-696727:-1:exon
so has part: feature:690492-691526:-1:exon
so has part: feature:687856-687916:-1:exon
so has part: feature:687473-687668:-1:exon
so has part: feature:686295-686350:-1:exon
so has part: feature:684751-684885:-1:exon
so has part: feature:684564-684640:-1:exon
so has part: feature:684374-684417:-1:exon
so has part: feature:684113-684273:-1:exon
so has part: feature:683738-683844:-1:exon
so has part: feature:682988-683108:-1:exon
so has part: feature:680059-682631:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:697270-697433:-1:exon

position:697270:-1
position: 697270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:696612-696727:-1:exon

position:696612:-1
position: 696612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:696727:-1
position: 696727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:690492-691526:-1:exon

position:690492:-1
position: 690492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:691526:-1
position: 691526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:687856-687916:-1:exon

position:687856:-1
position: 687856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687916:-1
position: 687916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:687473-687668:-1:exon

position:687473:-1
position: 687473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687668:-1
position: 687668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:686295-686350:-1:exon

position:686295:-1
position: 686295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686350:-1
position: 686350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:684751-684885:-1:exon

position:684751:-1
position: 684751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684885:-1
position: 684885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:684564-684640:-1:exon

position:684564:-1
position: 684564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684640:-1
position: 684640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:684374-684417:-1:exon

position:684374:-1
position: 684374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684417:-1
position: 684417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:684113-684273:-1:exon

position:684113:-1
position: 684113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684273:-1
position: 684273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:683738-683844:-1:exon

position:683738:-1
position: 683738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683844:-1
position: 683844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:682988-683108:-1:exon

position:682988:-1
position: 682988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683108:-1
position: 683108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:680059-682631:-1:exon

position:682631:-1
position: 682631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TACC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TACC1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: transforming acidic coiled-coil-containing protein 1
translation: MAFSAWQILSPVQWARWTWSAVRGGGSPEGEDGGAAAEDSLAEGTALGFSSDSEGNFETPEAETPTCSPLKEFCEPPPGPLEPEARSQGQSGHGDLLVGGAHQDISPEKHPKNEAQPEIRAPKGNSEPKGESSPKDSSLTQPLAVLGSGAGTGSATVPTAEVTPVPHAGRATQEQDMLGENPVDTSTGLAELEADVLAKDQGQLGKEKPPPVGGKAGEGTEEPPVPQASYGFDPEQYNESINPFVAGGCRLQSSPPASPRHLPHPGCSPGDPGRDLDPEPKGQVPKPEVECVEGGESMEAKRAAPRKGSRIPASKVTPKRHRESPKKQSEEGERGPMEPSPPQGPPVPVPHWDSSGLGSALQNSPALPKGSYQFDPNDLDSVDPFKPTKTLASSCPTADNSLNKTLESQPLEVQEELVRGRDSPKKPKSRLITSGCKVKPYETQSLVLDVCAQDEGALISEIPDLANRDGRATDEEKLACTTSAQKPVGLEKKGEPEDDLEYFECSNVPVPGKPGVDAGFEKEICKQMEKDEPGTHPGNPGLCSMDKSPTAISGVSRSESPLDGICLSESEKTAVLTLIREEIITKEIEANEWKKKYEESHQEVLEMRKIVAEYEKTIAQMIEDEQRTNMTSQKNLQQLTMEKEQALADLNSVERSLSDLFRRYENLKGVLEGFKKNEEALKKCAQDYLTRVKQEEQRYQALKVHAEEKLDKANEEIAQVRTKAKAESAALHAGLRKEQMKVESLERALQQKNQEIEELTKICDELIAKLGKAD
SIO_010081: TACC1
subclass of: SO_0000673
so part of: TACC1
location: complement(join(682563..682631,682988..683108,683738..683844,684113..684273,684374..684417,684564..684640,684751..684885,686295..686350,687473..687668,687856..687916,690492..691526,696612..696727,697270..697418))
location: region:682563-697418:-1
so has part: feature:697270-697418:-1:exon
so has part: feature:696612-696727:-1:exon
so has part: feature:690492-691526:-1:exon
so has part: feature:687856-687916:-1:exon
so has part: feature:687473-687668:-1:exon
so has part: feature:686295-686350:-1:exon
so has part: feature:684751-684885:-1:exon
so has part: feature:684564-684640:-1:exon
so has part: feature:684374-684417:-1:exon
so has part: feature:684113-684273:-1:exon
so has part: feature:683738-683844:-1:exon
so has part: feature:682988-683108:-1:exon
so has part: feature:682563-682631:-1:exon

XP_030319874.1
type: Protein
SIO_000068: ncbiprotein

position:682563:-1
position: 682563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:697418:-1
position: 697418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:697270-697418:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:696612-696727:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:690492-691526:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:687856-687916:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:687473-687668:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:686295-686350:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:684751-684885:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:684564-684640:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:684374-684417:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:684113-684273:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:683738-683844:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:682988-683108:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:682563-682631:-1:exon

FGFR1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: FGFR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 739262..765322
location: region:739262-765322:1
so has part: feature:739262-765322:1:exon
subclass of: SO_0000010

103535383
type: Gene
SIO_000068: ncbigene

position:739262:1
position: 739262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:765322:1
position: 765322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:739262-765322:1:exon

FGFR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FGFR1
product: fibroblast growth factor receptor 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 15 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464013.1
SIO_010081: FGFR1
subclass of: SO_0000673
so part of: FGFR1
location: join(739262..739322,745326..745514,753092..753355,753987..754070,754215..754390,754925..755048,756311..756501,758968..759112,760334..760530,760996..761141,761256..761377,761494..761604,761720..761910,762066..762188,762345..762415,763046..763183,763468..763573,763694..765322)
location: region:739262-765322:1
so has part: feature:739262-739322:1:exon
so has part: feature:745326-745514:1:exon
so has part: feature:753092-753355:1:exon
so has part: feature:753987-754070:1:exon
so has part: feature:754215-754390:1:exon
so has part: feature:754925-755048:1:exon
so has part: feature:756311-756501:1:exon
so has part: feature:758968-759112:1:exon
so has part: feature:760334-760530:1:exon
so has part: feature:760996-761141:1:exon
so has part: feature:761256-761377:1:exon
so has part: feature:761494-761604:1:exon
so has part: feature:761720-761910:1:exon
so has part: feature:762066-762188:1:exon
so has part: feature:762345-762415:1:exon
so has part: feature:763046-763183:1:exon
so has part: feature:763468-763573:1:exon
so has part: feature:763694-765322:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:739262-739322:1:exon

position:739322:1
position: 739322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:745326-745514:1:exon

position:745326:1
position: 745326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:745514:1
position: 745514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:753092-753355:1:exon

position:753092:1
position: 753092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753355:1
position: 753355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:753987-754070:1:exon

position:753987:1
position: 753987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754070:1
position: 754070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:754215-754390:1:exon

position:754215:1
position: 754215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754390:1
position: 754390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:754925-755048:1:exon

position:754925:1
position: 754925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:755048:1
position: 755048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:756311-756501:1:exon

position:756311:1
position: 756311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:756501:1
position: 756501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:758968-759112:1:exon

position:758968:1
position: 758968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759112:1
position: 759112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:760334-760530:1:exon

position:760334:1
position: 760334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:760530:1
position: 760530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:760996-761141:1:exon

position:760996:1
position: 760996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761141:1
position: 761141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:761256-761377:1:exon

position:761256:1
position: 761256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761377:1
position: 761377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:761494-761604:1:exon

position:761494:1
position: 761494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761604:1
position: 761604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:761720-761910:1:exon

position:761720:1
position: 761720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761910:1
position: 761910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:762066-762188:1:exon

position:762066:1
position: 762066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:762188:1
position: 762188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:762345-762415:1:exon

position:762345:1
position: 762345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:762415:1
position: 762415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:763046-763183:1:exon

position:763046:1
position: 763046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:763183:1
position: 763183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:763468-763573:1:exon

position:763468:1
position: 763468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:763573:1
position: 763573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:763694-765322:1:exon

position:763694:1
position: 763694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGFR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FGFR1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: fibroblast growth factor receptor 1
translation: MFTWRCLILWAVLVTAALSAARPAPTLPDQVLPKAKIEVESYSAHPGDLLQLRCQLRDDIQSINWVRDGVQLAENNRTRITGEEVEVRDAVPEDSGLYACMTNSPSGSKTTYFSVNVSDVLPSAEDDDDEDDSSSEEKEADNTKPNQAIAPYWTYPEKMEKKLHAVPAAKTVKFKCPSSGTPNPTLRWLKNGKEFKPDHRIGGYKVRYATWSIIMDSVVPSDKGNYTCIVENKYGSINHTYQLDVVERSPHRPILQAGLPANKTVALGSNVEFVCKVYSDPQPHIQWLKHIEVNGSKIGPDNLPYVQILKTAGVNTTDKEMEVLHLRNVSFEDAGEYTCLAGNSIGISHHSAWLTVLEAIEDTPAMMTSPLYLEIIIYCTGAFLISCMVVTVIIYKMKSTTKKTDFNSQLAVHKLAKSIPLRRQVSADSSSSMNSGVMLVRPSRLSSSGTPMLAGVSEYELPEDPRWELPRDRLILGKPLGEGCFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGMEYCYNPTRVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAMTSNQEYLDLSXPLDQYSPGFPDTRSSTCSSGEDSVFSHDPLPDEPCLPKLPPQHTNGGLKRH
SIO_010081: FGFR1
subclass of: SO_0000673
so part of: FGFR1
location: join(745424..745514,753092..753355,753987..754070,754215..754390,754925..755048,756311..756501,758968..759112,760334..760530,760996..761141,761256..761377,761494..761604,761720..761910,762066..762188,762345..762415,763046..763183,763468..763573,763694..763869)
location: region:745424-763869:1
so has part: feature:745424-745514:1:exon
so has part: feature:753092-753355:1:exon
so has part: feature:753987-754070:1:exon
so has part: feature:754215-754390:1:exon
so has part: feature:754925-755048:1:exon
so has part: feature:756311-756501:1:exon
so has part: feature:758968-759112:1:exon
so has part: feature:760334-760530:1:exon
so has part: feature:760996-761141:1:exon
so has part: feature:761256-761377:1:exon
so has part: feature:761494-761604:1:exon
so has part: feature:761720-761910:1:exon
so has part: feature:762066-762188:1:exon
so has part: feature:762345-762415:1:exon
so has part: feature:763046-763183:1:exon
so has part: feature:763468-763573:1:exon
so has part: feature:763694-763869:1:exon

XP_030319873.1
type: Protein
SIO_000068: ncbiprotein

position:745424:1
position: 745424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:763869:1
position: 763869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:745424-745514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:753092-753355:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:753987-754070:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:754215-754390:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:754925-755048:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:756311-756501:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:758968-759112:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:760334-760530:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:760996-761141:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:761256-761377:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:761494-761604:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:761720-761910:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:762066-762188:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:762345-762415:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:763046-763183:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:763468-763573:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:763694-763869:1:exon

LETM2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LETM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(770521..781323)
location: region:770521-781323:-1
so has part: feature:770521-781323:-1:exon
subclass of: SO_0000010

103535385
type: Gene
SIO_000068: ncbigene

position:770521:-1
position: 770521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:781323:-1
position: 781323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:770521-781323:-1:exon

LETM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LETM2
product: leucine zipper and EF-hand containing transmembrane protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 long SRA read, 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030464035.1
SIO_010081: LETM2
subclass of: SO_0000673
so part of: LETM2
location: complement(join(770521..771610,774548..774625,774760..774870,775427..775546,775976..776179,777248..777382,777630..777773,779352..779769,781078..781323))
location: region:770521-781323:-1
so has part: feature:781078-781323:-1:exon
so has part: feature:779352-779769:-1:exon
so has part: feature:777630-777773:-1:exon
so has part: feature:777248-777382:-1:exon
so has part: feature:775976-776179:-1:exon
so has part: feature:775427-775546:-1:exon
so has part: feature:774760-774870:-1:exon
so has part: feature:774548-774625:-1:exon
so has part: feature:770521-771610:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:781078-781323:-1:exon

position:781078:-1
position: 781078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:779352-779769:-1:exon

position:779352:-1
position: 779352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:779769:-1
position: 779769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:777630-777773:-1:exon

position:777630:-1
position: 777630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777773:-1
position: 777773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:777248-777382:-1:exon

position:777248:-1
position: 777248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777382:-1
position: 777382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:775976-776179:-1:exon

position:775976:-1
position: 775976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:776179:-1
position: 776179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:775427-775546:-1:exon

position:775427:-1
position: 775427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775546:-1
position: 775546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:774760-774870:-1:exon

position:774760:-1
position: 774760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:774870:-1
position: 774870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:774548-774625:-1:exon

position:774548:-1
position: 774548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:774625:-1
position: 774625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:770521-771610:-1:exon

position:771610:-1
position: 771610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LETM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LETM2
product: leucine zipper and EF-hand containing transmembrane protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464034.1
SIO_010081: LETM2
subclass of: SO_0000673
so part of: LETM2
location: complement(join(770521..771610,772965..773024,774548..774625,774760..774870,775427..775546,775976..776179,777248..777382,777630..777773,779352..779769,781078..781205))
location: region:770521-781205:-1
so has part: feature:781078-781205:-1:exon
so has part: feature:779352-779769:-1:exon
so has part: feature:777630-777773:-1:exon
so has part: feature:777248-777382:-1:exon
so has part: feature:775976-776179:-1:exon
so has part: feature:775427-775546:-1:exon
so has part: feature:774760-774870:-1:exon
so has part: feature:774548-774625:-1:exon
so has part: feature:772965-773024:-1:exon
so has part: feature:770521-771610:-1:exon

position:781205:-1
position: 781205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:781078-781205:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:779352-779769:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:777630-777773:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:777248-777382:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:775976-776179:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:775427-775546:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:774760-774870:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:774548-774625:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:772965-773024:-1:exon

position:772965:-1
position: 772965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:773024:-1
position: 773024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:770521-771610:-1:exon

LETM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LETM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LETM1 domain-containing protein LETM2, mitochondrial isoform X2
translation: MDPNPLIRTARAGFRSCRRLLLPPDSPVPGVSLRVLAPPLSRADGRGPGSQPGLCWALLGSASTGTIRTLHTSPPLPRDLQEEPQPRRDPKTAETSPKVLGEGKKSWRQRAVDELRHYQNGFHWLWVDTKVAARMVWRLLHGQVLTRRERRRLLRTCADLFRLVPFLVFVIVPFMEFLLPLFLKLFPEMLPSTFETESKKEEKQKKKLNAKLELAKFLQETVAEMAKRNKAATGQGKKFSSYVQQIRHSGHQPSTQEILSFSKLFEDELTLEHLERPQLVALCKLLELQPLGTNNLLRFQLLLRLRTIKADDEMIAKEGVHVLSVSELQSACRARGMRSLGLSQEQLKEQLGQWLDLHLKENVPPSLLLLSRALYLIDVKPQSVPVPQNQASEAAETIPEGQETLVDPAPAAQGRKAQREAPQSSQANGA
SIO_010081: LETM2
subclass of: SO_0000673
so part of: LETM2
location: complement(join(771566..771610,774548..774625,774760..774870,775427..775546,775976..776179,777248..777382,777630..777773,779352..779769,781078..781115))
location: region:771566-781115:-1
so has part: feature:781078-781115:-1:exon
so has part: feature:779352-779769:-1:exon
so has part: feature:777630-777773:-1:exon
so has part: feature:777248-777382:-1:exon
so has part: feature:775976-776179:-1:exon
so has part: feature:775427-775546:-1:exon
so has part: feature:774760-774870:-1:exon
so has part: feature:774548-774625:-1:exon
so has part: feature:771566-771610:-1:exon

XP_030319895.1
type: Protein
SIO_000068: ncbiprotein

position:771566:-1
position: 771566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:781115:-1
position: 781115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:781078-781115:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:779352-779769:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:777630-777773:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:777248-777382:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:775976-776179:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:775427-775546:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:774760-774870:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:774548-774625:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:771566-771610:-1:exon

LETM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LETM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LETM1 domain-containing protein LETM2, mitochondrial isoform X1
translation: MDPNPLIRTARAGFRSCRRLLLPPDSPVPGVSLRVLAPPLSRADGRGPGSQPGLCWALLGSASTGTIRTLHTSPPLPRDLQEEPQPRRDPKTAETSPKVLGEGKKSWRQRAVDELRHYQNGFHWLWVDTKVAARMVWRLLHGQVLTRRERRRLLRTCADLFRLVPFLVFVIVPFMEFLLPLFLKLFPEMLPSTFETESKKEEKQKKKLNAKLELAKFLQETVAEMAKRNKAATGQGKKFSSYVQQIRHSGHQPSTQEILSFSKLFEDELTLEHLERPQLVALCKLLELQPLGTNNLLRFQLLLRLRTIKADDEMIAKEGVHVLSVSELQSACRARGMRSLGLSQEQLKEQLGQWLDLHLKENVPPSLLLLSRALYLIDVKPQSVPVPQNQASEAAETIPEGQETLVDPAPAAQGRKNEEFVPQPAEKLPGSGAPLEAQREAPQSSQANGA
SIO_010081: LETM2
subclass of: SO_0000673
so part of: LETM2
location: complement(join(771566..771610,772965..773024,774548..774625,774760..774870,775427..775546,775976..776179,777248..777382,777630..777773,779352..779769,781078..781115))
location: region:771566-781115:-1
so has part: feature:781078-781115:-1:exon
so has part: feature:779352-779769:-1:exon
so has part: feature:777630-777773:-1:exon
so has part: feature:777248-777382:-1:exon
so has part: feature:775976-776179:-1:exon
so has part: feature:775427-775546:-1:exon
so has part: feature:774760-774870:-1:exon
so has part: feature:774548-774625:-1:exon
so has part: feature:772965-773024:-1:exon
so has part: feature:771566-771610:-1:exon

XP_030319894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:781078-781115:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:779352-779769:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:777630-777773:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:777248-777382:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:775976-776179:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:775427-775546:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:774760-774870:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:774548-774625:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:772965-773024:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:771566-771610:-1:exon

NSD3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: NSD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 786533..824616
location: region:786533-824616:1
so has part: feature:786533-824616:1:exon
subclass of: SO_0000010

103535386
type: Gene
SIO_000068: ncbigene

position:786533:1
position: 786533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:824616:1
position: 824616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:786533-824616:1:exon

NSD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NSD3
product: nuclear receptor binding SET domain protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs, 5 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030464007.1
SIO_010081: NSD3
subclass of: SO_0000673
so part of: NSD3
location: join(786533..786932,796920..797635,800243..800311,800730..800889,801314..801468,801950..802453,803261..803387,806639..806739,809048..809093,809621..809751,810268..810396,810986..811112,811521..811718,812282..812452,814885..815034,817199..817355,817834..818036,818488..818600,819336..819605,820331..820447,820751..820892,821054..821160,821493..821697,821817..824616)
location: region:786533-824616:1
so has part: feature:786533-786932:1:exon
so has part: feature:796920-797635:1:exon
so has part: feature:800243-800311:1:exon
so has part: feature:800730-800889:1:exon
so has part: feature:801314-801468:1:exon
so has part: feature:801950-802453:1:exon
so has part: feature:803261-803387:1:exon
so has part: feature:806639-806739:1:exon
so has part: feature:809048-809093:1:exon
so has part: feature:809621-809751:1:exon
so has part: feature:810268-810396:1:exon
so has part: feature:810986-811112:1:exon
so has part: feature:811521-811718:1:exon
so has part: feature:812282-812452:1:exon
so has part: feature:814885-815034:1:exon
so has part: feature:817199-817355:1:exon
so has part: feature:817834-818036:1:exon
so has part: feature:818488-818600:1:exon
so has part: feature:819336-819605:1:exon
so has part: feature:820331-820447:1:exon
so has part: feature:820751-820892:1:exon
so has part: feature:821054-821160:1:exon
so has part: feature:821493-821697:1:exon
so has part: feature:821817-824616:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:786533-786932:1:exon

position:786932:1
position: 786932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:796920-797635:1:exon

position:796920:1
position: 796920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:797635:1
position: 797635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:800243-800311:1:exon

position:800243:1
position: 800243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:800311:1
position: 800311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:800730-800889:1:exon

position:800730:1
position: 800730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:800889:1
position: 800889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:801314-801468:1:exon

position:801314:1
position: 801314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:801468:1
position: 801468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:801950-802453:1:exon

position:801950:1
position: 801950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:802453:1
position: 802453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:803261-803387:1:exon

position:803261:1
position: 803261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:803387:1
position: 803387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:806639-806739:1:exon

position:806639:1
position: 806639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806739:1
position: 806739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:809048-809093:1:exon

position:809048:1
position: 809048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:809093:1
position: 809093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:809621-809751:1:exon

position:809621:1
position: 809621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:809751:1
position: 809751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:810268-810396:1:exon

position:810268:1
position: 810268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:810396:1
position: 810396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:810986-811112:1:exon

position:810986:1
position: 810986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:811112:1
position: 811112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:811521-811718:1:exon

position:811521:1
position: 811521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:811718:1
position: 811718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:812282-812452:1:exon

position:812282:1
position: 812282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812452:1
position: 812452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:814885-815034:1:exon

position:814885:1
position: 814885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:815034:1
position: 815034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:817199-817355:1:exon

position:817199:1
position: 817199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:817355:1
position: 817355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:817834-818036:1:exon

position:817834:1
position: 817834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:818036:1
position: 818036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:818488-818600:1:exon

position:818488:1
position: 818488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:818600:1
position: 818600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:819336-819605:1:exon

position:819336:1
position: 819336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:819605:1
position: 819605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:820331-820447:1:exon

position:820331:1
position: 820331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:820447:1
position: 820447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:820751-820892:1:exon

position:820751:1
position: 820751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:820892:1
position: 820892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:821054-821160:1:exon

position:821054:1
position: 821054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:821160:1
position: 821160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:821493-821697:1:exon

position:821493:1
position: 821493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:821697:1
position: 821697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:821817-824616:1:exon

position:821817:1
position: 821817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NSD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NSD3
product: nuclear receptor binding SET domain protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 4 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030464008.1
SIO_010081: NSD3
subclass of: SO_0000673
so part of: NSD3
location: join(786533..786932,796920..797635,800243..800311,800730..800889,801314..801468,801950..802453,803261..803387,806639..806739,809048..809093,809621..809751,810268..810396,810986..811112,811521..811718,812282..812452,817199..817355,817834..818036,818488..818600,819336..819605,820331..820447,820751..820892,821054..821160,821493..821697,821817..824616)
location: region:786533-824616:1
so has part: feature:786533-786932:1:exon
so has part: feature:796920-797635:1:exon
so has part: feature:800243-800311:1:exon
so has part: feature:800730-800889:1:exon
so has part: feature:801314-801468:1:exon
so has part: feature:801950-802453:1:exon
so has part: feature:803261-803387:1:exon
so has part: feature:806639-806739:1:exon
so has part: feature:809048-809093:1:exon
so has part: feature:809621-809751:1:exon
so has part: feature:810268-810396:1:exon
so has part: feature:810986-811112:1:exon
so has part: feature:811521-811718:1:exon
so has part: feature:812282-812452:1:exon
so has part: feature:817199-817355:1:exon
so has part: feature:817834-818036:1:exon
so has part: feature:818488-818600:1:exon
so has part: feature:819336-819605:1:exon
so has part: feature:820331-820447:1:exon
so has part: feature:820751-820892:1:exon
so has part: feature:821054-821160:1:exon
so has part: feature:821493-821697:1:exon
so has part: feature:821817-824616:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:786533-786932:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:796920-797635:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:800243-800311:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:800730-800889:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:801314-801468:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:801950-802453:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:803261-803387:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:806639-806739:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:809048-809093:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:809621-809751:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:810268-810396:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:810986-811112:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:811521-811718:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:812282-812452:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:817199-817355:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:817834-818036:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:818488-818600:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:819336-819605:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:820331-820447:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:820751-820892:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:821054-821160:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:821493-821697:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:821817-824616:1:exon

NSD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NSD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase NSD3 isoform X1
translation: MDFSFSFMQGIMGNTIQQPPQLIDSANIRQDDAFDASSDIAEDGGQTPYEAALQQGFQYPTPTSEDLPPISNGFPPTINIYEPQAKYQPYSQYPNGSANGYGASRNFSPQEYYPLENSTPRAQEVLEKPSPPQPPPPASQTGIPKKTGSPEIKLKITKTIQNGRELFESSLCGDLLNEVQASEYAKAKHEGRKEKRKKSSKHDSSRSEERKSHKIPKLEPEEQNRPNERLSMLSERPREDTVLEEPQVQQLLPSLPTQVTHDIKFQVGDLVWSKVGTYPWWPCMVSCDPQLDVHTKINTRGAREYHVQFFSNQPERAWVHEKRVREYRGHKQYEQLLAEAAKQASNHSEKQKIRKPRPQRERAQWDIGIAHAEKALKMTREERIEQYTFIYIDKEPEEALSKAKKTAAPKSETKKNRRPKPAPSTHPDPPEGAAASPSGAEARRQSQRRQSSVEEEEPPPVKIAWKTAAARKSLPPSITMHNLDLQKCNMSPVVKIEQVFALQNAAGDGKLIDQFVYSTKGVGNKTEISVKGQEKLNSSSNQRNEKAAVQNVSSPETTSGSTGSVEKKQQRRSIRTRSESEKSTEVVPKKKIKKEQVEMVPLTAVKTALQKGASEISDSCKPLKKRSRASTDVELTSSAYRDTSDSDSRGLNDVQGSFGKRSDSPSAAADADASDVQSVDSSLSRRGTGTNKKDTVCQICESSGESLVSCEGECCSVFHVECLGLKLMPDEKFICTECKNGEHTCFSCKLPGKDVKRCSVSSCGKFYHEVCVRKFPTALFESRGFRCPQHCCTACSMDKDIHKASKGRMVRCFRCPIAYHSGDGCIAAGSLFVSSHILICSNHSKRNHSSSAVNVGFCFVCARGLVVQDHSDPLFSSYAYKSHYLLNESNRAELMKLPMIPPPSSASKKKCEKGGKLLCCESCPASFHPECLNIEMPEGCWNCNDCKAGKKLRYKQIVWVKLGNYRWWPAEICNPRSVPLNIQGLKHDIGDFPVFFFGSHDYYWVHQGRVFPYVEGDKSFAEGQTSINKTFKKALEEAAKRFQELKAQRESKEALEIERNSRKPPPYKHIKSNKVIGKVQIQVADLSEIPRCNCKPSDENPCGLESECLNRMLQYECHPQVCPAGERCQNQCFTKRLYPDAEIIKTDRRGWGLRTKRSIKKGEFVNEYVGELIDEEECRLRIKRAHENSVTNFYMLTVTKDRIIDAGPKGNYSRFMNHSCNPNCETQKWTVNGDIRVGLFALCDIPAGMELTFNYNLDCLGNGRTECHCGAENCSGFLGVRPKTAFATANEEKVKNAKLKQKKRKMKTEQKQMHEDNCFQCGDGGELVMCDKKDCPKAYHLLCLNLTQPPFGKWECPWHQCDICSTPAVSFCEFCPHSFCRDHEKGALVASALDGRLCCSAHDPKSPVAPEYWSKIKCKLEAQNPVEEAAKE
SIO_010081: NSD3
subclass of: SO_0000673
so part of: NSD3
location: join(796964..797635,800243..800311,800730..800889,801314..801468,801950..802453,803261..803387,806639..806739,809048..809093,809621..809751,810268..810396,810986..811112,811521..811718,812282..812452,814885..815034,817199..817355,817834..818036,818488..818600,819336..819605,820331..820447,820751..820892,821054..821160,821493..821697,821817..822061)
location: region:796964-822061:1
so has part: feature:796964-797635:1:exon
so has part: feature:800243-800311:1:exon
so has part: feature:800730-800889:1:exon
so has part: feature:801314-801468:1:exon
so has part: feature:801950-802453:1:exon
so has part: feature:803261-803387:1:exon
so has part: feature:806639-806739:1:exon
so has part: feature:809048-809093:1:exon
so has part: feature:809621-809751:1:exon
so has part: feature:810268-810396:1:exon
so has part: feature:810986-811112:1:exon
so has part: feature:811521-811718:1:exon
so has part: feature:812282-812452:1:exon
so has part: feature:814885-815034:1:exon
so has part: feature:817199-817355:1:exon
so has part: feature:817834-818036:1:exon
so has part: feature:818488-818600:1:exon
so has part: feature:819336-819605:1:exon
so has part: feature:820331-820447:1:exon
so has part: feature:820751-820892:1:exon
so has part: feature:821054-821160:1:exon
so has part: feature:821493-821697:1:exon
so has part: feature:821817-822061:1:exon

XP_030319867.1
type: Protein
SIO_000068: ncbiprotein

position:796964:1
position: 796964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:822061:1
position: 822061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:796964-797635:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:800243-800311:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:800730-800889:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:801314-801468:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:801950-802453:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:803261-803387:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:806639-806739:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:809048-809093:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:809621-809751:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:810268-810396:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:810986-811112:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:811521-811718:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:812282-812452:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:814885-815034:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:817199-817355:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:817834-818036:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:818488-818600:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:819336-819605:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:820331-820447:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:820751-820892:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:821054-821160:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:821493-821697:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:821817-822061:1:exon

NSD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NSD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase NSD3 isoform X2
translation: MDFSFSFMQGIMGNTIQQPPQLIDSANIRQDDAFDASSDIAEDGGQTPYEAALQQGFQYPTPTSEDLPPISNGFPPTINIYEPQAKYQPYSQYPNGSANGYGASRNFSPQEYYPLENSTPRAQEVLEKPSPPQPPPPASQTGIPKKTGSPEIKLKITKTIQNGRELFESSLCGDLLNEVQASEYAKAKHEGRKEKRKKSSKHDSSRSEERKSHKIPKLEPEEQNRPNERLSMLSERPREDTVLEEPQVQQLLPSLPTQVTHDIKFQVGDLVWSKVGTYPWWPCMVSCDPQLDVHTKINTRGAREYHVQFFSNQPERAWVHEKRVREYRGHKQYEQLLAEAAKQASNHSEKQKIRKPRPQRERAQWDIGIAHAEKALKMTREERIEQYTFIYIDKEPEEALSKAKKTAAPKSETKKNRRPKPAPSTHPDPPEGAAASPSGAEARRQSQRRQSSVEEEEPPPVKIAWKTAAARKSLPPSITMHNLDLQKCNMSPVVKIEQVFALQNAAGDGKLIDQFVYSTKGVGNKTEISVKGQEKLNSSSNQRNEKAAVQNVSSPETTSGSTGSVEKKQQRRSIRTRSESEKSTEVVPKKKIKKEQVEMVPLTAVKTALQKGASEISDSCKPLKKRSRASTDVELTSSAYRDTSDSDSRGLNDVQGSFGKRSDSPSAAADADASDVQSVDSSLSRRGTGTNKKDTVCQICESSGESLVSCEGECCSVFHVECLGLKLMPDEKFICTECKNGEHTCFSCKLPGKDVKRCSVSSCGKFYHEVCVRKFPTALFESRGFRCPQHCCTACSMDKDIHKASKGRMVRCFRCPIAYHSGDGCIAAGSLFVSSHILICSNHSKRNHSSSAVNVGFCFVCARGGKLLCCESCPASFHPECLNIEMPEGCWNCNDCKAGKKLRYKQIVWVKLGNYRWWPAEICNPRSVPLNIQGLKHDIGDFPVFFFGSHDYYWVHQGRVFPYVEGDKSFAEGQTSINKTFKKALEEAAKRFQELKAQRESKEALEIERNSRKPPPYKHIKSNKVIGKVQIQVADLSEIPRCNCKPSDENPCGLESECLNRMLQYECHPQVCPAGERCQNQCFTKRLYPDAEIIKTDRRGWGLRTKRSIKKGEFVNEYVGELIDEEECRLRIKRAHENSVTNFYMLTVTKDRIIDAGPKGNYSRFMNHSCNPNCETQKWTVNGDIRVGLFALCDIPAGMELTFNYNLDCLGNGRTECHCGAENCSGFLGVRPKTAFATANEEKVKNAKLKQKKRKMKTEQKQMHEDNCFQCGDGGELVMCDKKDCPKAYHLLCLNLTQPPFGKWECPWHQCDICSTPAVSFCEFCPHSFCRDHEKGALVASALDGRLCCSAHDPKSPVAPEYWSKIKCKLEAQNPVEEAAKE
SIO_010081: NSD3
subclass of: SO_0000673
so part of: NSD3
location: join(796964..797635,800243..800311,800730..800889,801314..801468,801950..802453,803261..803387,806639..806739,809048..809093,809621..809751,810268..810396,810986..811112,811521..811718,812282..812452,817199..817355,817834..818036,818488..818600,819336..819605,820331..820447,820751..820892,821054..821160,821493..821697,821817..822061)
location: region:796964-822061:1
so has part: feature:796964-797635:1:exon
so has part: feature:800243-800311:1:exon
so has part: feature:800730-800889:1:exon
so has part: feature:801314-801468:1:exon
so has part: feature:801950-802453:1:exon
so has part: feature:803261-803387:1:exon
so has part: feature:806639-806739:1:exon
so has part: feature:809048-809093:1:exon
so has part: feature:809621-809751:1:exon
so has part: feature:810268-810396:1:exon
so has part: feature:810986-811112:1:exon
so has part: feature:811521-811718:1:exon
so has part: feature:812282-812452:1:exon
so has part: feature:817199-817355:1:exon
so has part: feature:817834-818036:1:exon
so has part: feature:818488-818600:1:exon
so has part: feature:819336-819605:1:exon
so has part: feature:820331-820447:1:exon
so has part: feature:820751-820892:1:exon
so has part: feature:821054-821160:1:exon
so has part: feature:821493-821697:1:exon
so has part: feature:821817-822061:1:exon

XP_030319868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:796964-797635:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:800243-800311:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:800730-800889:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:801314-801468:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:801950-802453:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:803261-803387:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:806639-806739:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:809048-809093:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:809621-809751:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:810268-810396:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:810986-811112:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:811521-811718:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:812282-812452:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:817199-817355:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:817834-818036:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:818488-818600:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:819336-819605:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:820331-820447:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:820751-820892:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:821054-821160:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:821493-821697:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:821817-822061:1:exon

PLPP5
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PLPP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 827519..830802
location: region:827519-830802:1
so has part: feature:827519-830802:1:exon
subclass of: SO_0000010

103535365
type: Gene
SIO_000068: ncbigene

position:827519:1
position: 827519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:830802:1
position: 830802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:827519-830802:1:exon

PLPP5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PLPP5
product: phospholipid phosphatase 5
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464054.1
SIO_010081: PLPP5
subclass of: SO_0000673
so part of: PLPP5
location: join(827519..827593,827991..828099,828566..828656,828846..828909,829261..829385,829485..829655,829754..830802)
location: region:827519-830802:1
so has part: feature:827519-827593:1:exon
so has part: feature:827991-828099:1:exon
so has part: feature:828566-828656:1:exon
so has part: feature:828846-828909:1:exon
so has part: feature:829261-829385:1:exon
so has part: feature:829485-829655:1:exon
so has part: feature:829754-830802:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:827519-827593:1:exon

position:827593:1
position: 827593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:827991-828099:1:exon

position:827991:1
position: 827991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:828099:1
position: 828099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:828566-828656:1:exon

position:828566:1
position: 828566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:828656:1
position: 828656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:828846-828909:1:exon

position:828846:1
position: 828846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:828909:1
position: 828909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:829261-829385:1:exon

position:829261:1
position: 829261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:829385:1
position: 829385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:829485-829655:1:exon

position:829485:1
position: 829485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:829655:1
position: 829655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:829754-830802:1:exon

position:829754:1
position: 829754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLPP5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PLPP5
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: phospholipid phosphatase 5
translation: MRRAGGAAELAGEAAVRGLLLAACGIMEFLPPFQRVVQPEELWLYKNPYVQADRVPTLPMFFISFLSPLLLILLARLLMGADRADTREGFLAASLALSLNGVFTNALKLVVGRPRPDFFYRCFPDGRANAELLCTGDPGVVAEGRKSFPSGHASFAFAGLAFSAFYLAGKLRCFSPGRGSRALRLCAFLLPLFLATLIAVSRTCDYKHHWQDVLVGSGMGFLLAYLCYRQYYPPLMDSMCHKPFLHKARPLPAHQEHPAASSFHLDI
SIO_010081: PLPP5
subclass of: SO_0000673
so part of: PLPP5
location: join(827519..827593,827991..828099,828566..828656,828846..828909,829261..829385,829485..829655,829754..829923)
location: region:827519-829923:1
so has part: feature:827519-827593:1:exon
so has part: feature:827991-828099:1:exon
so has part: feature:828566-828656:1:exon
so has part: feature:828846-828909:1:exon
so has part: feature:829261-829385:1:exon
so has part: feature:829485-829655:1:exon
so has part: feature:829754-829923:1:exon

XP_030319914.1
type: Protein
SIO_000068: ncbiprotein

position:829923:1
position: 829923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:827519-827593:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:827991-828099:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:828566-828656:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:828846-828909:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:829261-829385:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:829485-829655:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:829754-829923:1:exon

DDHD2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: DDHD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(830885..840707)
location: region:830885-840707:-1
so has part: feature:830885-840707:-1:exon
subclass of: SO_0000010

103535387
type: Gene
SIO_000068: ncbigene

position:830885:-1
position: 830885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:840707:-1
position: 840707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:830885-840707:-1:exon

DDHD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: DDHD2
product: DDHD domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030464016.1
SIO_010081: DDHD2
subclass of: SO_0000673
so part of: DDHD2
location: complement(join(830885..831758,831891..831901,832196..832314,832539..832701,833088..833264,833362..833464,833540..833695,833785..833910,834203..834298,834458..834750,835559..835767,836028..836163,837099..837188,837727..837847,838082..838171,838968..839158,840255..840707))
location: region:830885-840707:-1
so has part: feature:840255-840707:-1:exon
so has part: feature:838968-839158:-1:exon
so has part: feature:838082-838171:-1:exon
so has part: feature:837727-837847:-1:exon
so has part: feature:837099-837188:-1:exon
so has part: feature:836028-836163:-1:exon
so has part: feature:835559-835767:-1:exon
so has part: feature:834458-834750:-1:exon
so has part: feature:834203-834298:-1:exon
so has part: feature:833785-833910:-1:exon
so has part: feature:833540-833695:-1:exon
so has part: feature:833362-833464:-1:exon
so has part: feature:833088-833264:-1:exon
so has part: feature:832539-832701:-1:exon
so has part: feature:832196-832314:-1:exon
so has part: feature:831891-831901:-1:exon
so has part: feature:830885-831758:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:840255-840707:-1:exon

position:840255:-1
position: 840255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:838968-839158:-1:exon

position:838968:-1
position: 838968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:839158:-1
position: 839158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:838082-838171:-1:exon

position:838082:-1
position: 838082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:838171:-1
position: 838171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:837727-837847:-1:exon

position:837727:-1
position: 837727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:837847:-1
position: 837847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:837099-837188:-1:exon

position:837099:-1
position: 837099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:837188:-1
position: 837188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:836028-836163:-1:exon

position:836028:-1
position: 836028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:836163:-1
position: 836163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:835559-835767:-1:exon

position:835559:-1
position: 835559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:835767:-1
position: 835767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:834458-834750:-1:exon

position:834458:-1
position: 834458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:834750:-1
position: 834750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:834203-834298:-1:exon

position:834203:-1
position: 834203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:834298:-1
position: 834298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:833785-833910:-1:exon

position:833785:-1
position: 833785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:833910:-1
position: 833910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:833540-833695:-1:exon

position:833540:-1
position: 833540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:833695:-1
position: 833695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:833362-833464:-1:exon

position:833362:-1
position: 833362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:833464:-1
position: 833464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:833088-833264:-1:exon

position:833088:-1
position: 833088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:833264:-1
position: 833264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:832539-832701:-1:exon

position:832539:-1
position: 832539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:832701:-1
position: 832701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:832196-832314:-1:exon

position:832196:-1
position: 832196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:832314:-1
position: 832314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:831891-831901:-1:exon

position:831891:-1
position: 831891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:831901:-1
position: 831901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:830885-831758:-1:exon

position:831758:-1
position: 831758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DDHD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: DDHD2
product: DDHD domain containing 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 long SRA read, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030464020.1
SIO_010081: DDHD2
subclass of: SO_0000673
so part of: DDHD2
location: complement(join(831756..831901,832196..832314,832539..832701,833088..833264,833362..833464,833540..833695,833785..833910,834203..834298,834458..834577,834686..834750,835559..835767,836028..836163,837099..837188,837727..837847,838082..838171,838968..839158,840255..840707))
location: region:831756-840707:-1
so has part: feature:840255-840707:-1:exon
so has part: feature:838968-839158:-1:exon
so has part: feature:838082-838171:-1:exon
so has part: feature:837727-837847:-1:exon
so has part: feature:837099-837188:-1:exon
so has part: feature:836028-836163:-1:exon
so has part: feature:835559-835767:-1:exon
so has part: feature:834686-834750:-1:exon
so has part: feature:834458-834577:-1:exon
so has part: feature:834203-834298:-1:exon
so has part: feature:833785-833910:-1:exon
so has part: feature:833540-833695:-1:exon
so has part: feature:833362-833464:-1:exon
so has part: feature:833088-833264:-1:exon
so has part: feature:832539-832701:-1:exon
so has part: feature:832196-832314:-1:exon
so has part: feature:831756-831901:-1:exon

position:831756:-1
position: 831756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:840255-840707:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:838968-839158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:838082-838171:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:837727-837847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:837099-837188:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:836028-836163:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:835559-835767:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:834686-834750:-1:exon

position:834686:-1
position: 834686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:834458-834577:-1:exon

position:834577:-1
position: 834577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:834203-834298:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:833785-833910:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:833540-833695:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:833362-833464:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:833088-833264:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:832539-832701:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:832196-832314:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:831756-831901:-1:exon

DDHD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: DDHD2
product: DDHD domain containing 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464018.1
SIO_010081: DDHD2
subclass of: SO_0000673
so part of: DDHD2
location: complement(join(831756..831901,832196..832314,832539..832701,833088..833264,833362..833464,833540..833695,833785..833910,834203..834298,834458..834579,834682..834750,835559..835767,836028..836163,837099..837188,837727..837847,838082..838171,838968..839158,840255..840707))
location: region:831756-840707:-1
so has part: feature:840255-840707:-1:exon
so has part: feature:838968-839158:-1:exon
so has part: feature:838082-838171:-1:exon
so has part: feature:837727-837847:-1:exon
so has part: feature:837099-837188:-1:exon
so has part: feature:836028-836163:-1:exon
so has part: feature:835559-835767:-1:exon
so has part: feature:834682-834750:-1:exon
so has part: feature:834458-834579:-1:exon
so has part: feature:834203-834298:-1:exon
so has part: feature:833785-833910:-1:exon
so has part: feature:833540-833695:-1:exon
so has part: feature:833362-833464:-1:exon
so has part: feature:833088-833264:-1:exon
so has part: feature:832539-832701:-1:exon
so has part: feature:832196-832314:-1:exon
so has part: feature:831756-831901:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:840255-840707:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:838968-839158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:838082-838171:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:837727-837847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:837099-837188:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:836028-836163:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:835559-835767:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:834682-834750:-1:exon

position:834682:-1
position: 834682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:834458-834579:-1:exon

position:834579:-1
position: 834579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:834203-834298:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:833785-833910:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:833540-833695:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:833362-833464:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:833088-833264:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:832539-832701:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:832196-832314:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:831756-831901:-1:exon

DDHD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: DDHD2
product: DDHD domain containing 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464017.1
SIO_010081: DDHD2
subclass of: SO_0000673
so part of: DDHD2
location: complement(join(831756..831901,832196..832314,832539..832689,833088..833264,833362..833464,833540..833695,833785..833910,834203..834298,834458..834750,835559..835767,836028..836163,837099..837188,837727..837847,838082..838171,838968..839158,840255..840707))
location: region:831756-840707:-1
so has part: feature:840255-840707:-1:exon
so has part: feature:838968-839158:-1:exon
so has part: feature:838082-838171:-1:exon
so has part: feature:837727-837847:-1:exon
so has part: feature:837099-837188:-1:exon
so has part: feature:836028-836163:-1:exon
so has part: feature:835559-835767:-1:exon
so has part: feature:834458-834750:-1:exon
so has part: feature:834203-834298:-1:exon
so has part: feature:833785-833910:-1:exon
so has part: feature:833540-833695:-1:exon
so has part: feature:833362-833464:-1:exon
so has part: feature:833088-833264:-1:exon
so has part: feature:832539-832689:-1:exon
so has part: feature:832196-832314:-1:exon
so has part: feature:831756-831901:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:840255-840707:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:838968-839158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:838082-838171:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:837727-837847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:837099-837188:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:836028-836163:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:835559-835767:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:834458-834750:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:834203-834298:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:833785-833910:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:833540-833695:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:833362-833464:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:833088-833264:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:832539-832689:-1:exon

position:832689:-1
position: 832689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:832196-832314:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:831756-831901:-1:exon

DDHD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: DDHD2
product: DDHD domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_030464015.1
SIO_010081: DDHD2
subclass of: SO_0000673
so part of: DDHD2
location: complement(join(831756..831901,832196..832314,832539..832701,833088..833264,833362..833464,833540..833695,833785..833910,834203..834298,834458..834750,835559..835767,836028..836163,837099..837188,837727..837847,838082..838171,838968..839158,840255..840707))
location: region:831756-840707:-1
so has part: feature:840255-840707:-1:exon
so has part: feature:838968-839158:-1:exon
so has part: feature:838082-838171:-1:exon
so has part: feature:837727-837847:-1:exon
so has part: feature:837099-837188:-1:exon
so has part: feature:836028-836163:-1:exon
so has part: feature:835559-835767:-1:exon
so has part: feature:834458-834750:-1:exon
so has part: feature:834203-834298:-1:exon
so has part: feature:833785-833910:-1:exon
so has part: feature:833540-833695:-1:exon
so has part: feature:833362-833464:-1:exon
so has part: feature:833088-833264:-1:exon
so has part: feature:832539-832701:-1:exon
so has part: feature:832196-832314:-1:exon
so has part: feature:831756-831901:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:840255-840707:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:838968-839158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:838082-838171:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:837727-837847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:837099-837188:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:836028-836163:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:835559-835767:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:834458-834750:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:834203-834298:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:833785-833910:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:833540-833695:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:833362-833464:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:833088-833264:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:832539-832701:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:832196-832314:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:831756-831901:-1:exon

DDHD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: DDHD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipase DDHD2 isoform X4
translation: MSTRDQPPAQPPSAEAVEPEGANRYEAVVPHWFYRKVNDPRERWVPFSMQDSERLEEAHCSGGGEADVVVPTSGGRYDVLLGQRQRVAVYWEEEVAEVRRCTWFYKGDKDNKYIPYSEAFSEELEEAYMVAVTLDEWKKKLESPSREVIILHNPKLMVHYQPAASSDEWGSTPTEQGRPRTVKRGVENIAAEIPNGEPLQIDHLVFVVHGIGPACDIRFRSIVQCVNDFRNVSLSMLQAHFRKAQEQQQIGRVEFLPVNWHSSLHSTGVDVDLERITLPSINRLRHFINDTILDVFFYNSSTYCQTIVDTVASEMNRLYHLFLQRNPLFSGGVSIAGHSLGSLILFDLLTNQKASPEEEEGEGHRLASSSRGIEEVKEILKELELSEYCDVFEKEKMDGKALFLCTENNLKEMGIPLGPRMKILHYISSQRQMQDQSSAVPRHPGGQGAPPGSPSQHQDSPEDNRNCQYRDIGLGQVSANYPQLDYKPTIFFAFGSPIGMFLTVRGVKRINPNYSLPTCKGFFNIFHPFDPVAYRIEPMIVPDLEFEPMLLPHHKGRKRMHLELKEGLTRMSLDLKNNLLGSLRVAWQSFTRAQLPALEAASTDTGTSTEPEPEAAAEKEPALKSEEPSVAGKEEGSLINVGRLNGGNRIDYVLQEKPIESFNEYLFALQGHLCYWESEDTVLLVLKEIYQTKGITLDQPLPGGQ
SIO_010081: DDHD2
subclass of: SO_0000673
so part of: DDHD2
location: complement(join(832224..832314,832539..832701,833088..833264,833362..833464,833540..833695,833785..833910,834203..834298,834458..834577,834686..834750,835559..835767,836028..836163,837099..837188,837727..837847,838082..838171,838968..839158,840255..840438))
location: region:832224-840438:-1
so has part: feature:840255-840438:-1:exon
so has part: feature:838968-839158:-1:exon
so has part: feature:838082-838171:-1:exon
so has part: feature:837727-837847:-1:exon
so has part: feature:837099-837188:-1:exon
so has part: feature:836028-836163:-1:exon
so has part: feature:835559-835767:-1:exon
so has part: feature:834686-834750:-1:exon
so has part: feature:834458-834577:-1:exon
so has part: feature:834203-834298:-1:exon
so has part: feature:833785-833910:-1:exon
so has part: feature:833540-833695:-1:exon
so has part: feature:833362-833464:-1:exon
so has part: feature:833088-833264:-1:exon
so has part: feature:832539-832701:-1:exon
so has part: feature:832224-832314:-1:exon

XP_030319880.1
type: Protein
SIO_000068: ncbiprotein

position:832224:-1
position: 832224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:840438:-1
position: 840438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:840255-840438:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:838968-839158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:838082-838171:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:837727-837847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:837099-837188:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:836028-836163:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:835559-835767:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:834686-834750:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:834458-834577:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:834203-834298:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:833785-833910:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:833540-833695:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:833362-833464:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:833088-833264:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:832539-832701:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:832224-832314:-1:exon

DDHD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: DDHD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipase DDHD2 isoform X3
translation: MSTRDQPPAQPPSAEAVEPEGANRYEAVVPHWFYRKVNDPRERWVPFSMQDSERLEEAHCSGGGEADVVVPTSGGRYDVLLGQRQRVAVYWEEEVAEVRRCTWFYKGDKDNKYIPYSEAFSEELEEAYMVAVTLDEWKKKLESPSREVIILHNPKLMVHYQPAASSDEWGSTPTEQGRPRTVKRGVENIAAEIPNGEPLQIDHLVFVVHGIGPACDIRFRSIVQCVNDFRNVSLSMLQAHFRKAQEQQQIGRVEFLPVNWHSSLHSTGVDVDLERITLPSINRLRHFINDTILDVFFYNSSTYCQTIVDTVASEMNRLYHLFLQRNPLFSGGVSIAGHSLGSLILFDLLTNQKASPEEEEGEVEGHRLASSSRGIEEVKEILKELELSEYCDVFEKEKMDGKALFLCTENNLKEMGIPLGPRMKILHYISSQRQMQDQSSAVPRHPGGQGAPPGSPSQHQDSPEDNRNCQYRDIGLGQVSANYPQLDYKPTIFFAFGSPIGMFLTVRGVKRINPNYSLPTCKGFFNIFHPFDPVAYRIEPMIVPDLEFEPMLLPHHKGRKRMHLELKEGLTRMSLDLKNNLLGSLRVAWQSFTRAQLPALEAASTDTGTSTEPEPEAAAEKEPALKSEEPSVAGKEEGSLINVGRLNGGNRIDYVLQEKPIESFNEYLFALQGHLCYWESEDTVLLVLKEIYQTKGITLDQPLPGGQ
SIO_010081: DDHD2
subclass of: SO_0000673
so part of: DDHD2
location: complement(join(832224..832314,832539..832701,833088..833264,833362..833464,833540..833695,833785..833910,834203..834298,834458..834579,834682..834750,835559..835767,836028..836163,837099..837188,837727..837847,838082..838171,838968..839158,840255..840438))
location: region:832224-840438:-1
so has part: feature:840255-840438:-1:exon
so has part: feature:838968-839158:-1:exon
so has part: feature:838082-838171:-1:exon
so has part: feature:837727-837847:-1:exon
so has part: feature:837099-837188:-1:exon
so has part: feature:836028-836163:-1:exon
so has part: feature:835559-835767:-1:exon
so has part: feature:834682-834750:-1:exon
so has part: feature:834458-834579:-1:exon
so has part: feature:834203-834298:-1:exon
so has part: feature:833785-833910:-1:exon
so has part: feature:833540-833695:-1:exon
so has part: feature:833362-833464:-1:exon
so has part: feature:833088-833264:-1:exon
so has part: feature:832539-832701:-1:exon
so has part: feature:832224-832314:-1:exon

XP_030319878.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:840255-840438:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:838968-839158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:838082-838171:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:837727-837847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:837099-837188:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:836028-836163:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:835559-835767:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:834682-834750:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:834458-834579:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:834203-834298:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:833785-833910:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:833540-833695:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:833362-833464:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:833088-833264:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:832539-832701:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:832224-832314:-1:exon

DDHD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: DDHD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipase DDHD2 isoform X2
translation: MSTRDQPPAQPPSAEAVEPEGANRYEAVVPHWFYRKVNDPRERWVPFSMQDSERLEEAHCSGGGEADVVVPTSGGRYDVLLGQRQRVAVYWEEEVAEVRRCTWFYKGDKDNKYIPYSEAFSEELEEAYMVAVTLDEWKKKLESPSREVIILHNPKLMVHYQPAASSDEWGSTPTEQGRPRTVKRGVENIAAEIPNGEPLQIDHLVFVVHGIGPACDIRFRSIVQCVNDFRNVSLSMLQAHFRKAQEQQQIGRVEFLPVNWHSSLHSTGVDVDLERITLPSINRLRHFINDTILDVFFYNSSTYCQTIVDTVASEMNRLYHLFLQRNPLFSGGVSIAGHSLGSLILFDLLTNQKASPEEEEGEVGVIHRAPGGVPAGERRLQKAPEKGGEQTPGWLCSQGHRLASSSRGIEEVKEILKELELSEYCDVFEKEKMDGKALFLCTENNLKEMGIPLGPRMKILHYISSQRQMQDQSSAVPRHPGGQGAPPGSPSQHQDSPEDNRNCQYRDIGLGQVSANYPQLDYKPTIFFAFGSPIGMFLTVRGVKRINPNYSLPTCKGFFNIFHPFDPVAYRIEPMIVPDLEFEPMLLPHHKGRKRMHLELKEGLTRMSLDLKNNLLGSLRVAWQSFTRAQLPALEAASTDTGTSTEPEPEAAAEKEPEEPSVAGKEEGSLINVGRLNGGNRIDYVLQEKPIESFNEYLFALQGHLCYWESEDTVLLVLKEIYQTKGITLDQPLPGGQ
SIO_010081: DDHD2
subclass of: SO_0000673
so part of: DDHD2
location: complement(join(832224..832314,832539..832689,833088..833264,833362..833464,833540..833695,833785..833910,834203..834298,834458..834750,835559..835767,836028..836163,837099..837188,837727..837847,838082..838171,838968..839158,840255..840438))
location: region:832224-840438:-1
so has part: feature:840255-840438:-1:exon
so has part: feature:838968-839158:-1:exon
so has part: feature:838082-838171:-1:exon
so has part: feature:837727-837847:-1:exon
so has part: feature:837099-837188:-1:exon
so has part: feature:836028-836163:-1:exon
so has part: feature:835559-835767:-1:exon
so has part: feature:834458-834750:-1:exon
so has part: feature:834203-834298:-1:exon
so has part: feature:833785-833910:-1:exon
so has part: feature:833540-833695:-1:exon
so has part: feature:833362-833464:-1:exon
so has part: feature:833088-833264:-1:exon
so has part: feature:832539-832689:-1:exon
so has part: feature:832224-832314:-1:exon

XP_030319877.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:840255-840438:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:838968-839158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:838082-838171:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:837727-837847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:837099-837188:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:836028-836163:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:835559-835767:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:834458-834750:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:834203-834298:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:833785-833910:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:833540-833695:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:833362-833464:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:833088-833264:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:832539-832689:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:832224-832314:-1:exon

DDHD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: DDHD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipase DDHD2 isoform X1
translation: MSTRDQPPAQPPSAEAVEPEGANRYEAVVPHWFYRKVNDPRERWVPFSMQDSERLEEAHCSGGGEADVVVPTSGGRYDVLLGQRQRVAVYWEEEVAEVRRCTWFYKGDKDNKYIPYSEAFSEELEEAYMVAVTLDEWKKKLESPSREVIILHNPKLMVHYQPAASSDEWGSTPTEQGRPRTVKRGVENIAAEIPNGEPLQIDHLVFVVHGIGPACDIRFRSIVQCVNDFRNVSLSMLQAHFRKAQEQQQIGRVEFLPVNWHSSLHSTGVDVDLERITLPSINRLRHFINDTILDVFFYNSSTYCQTIVDTVASEMNRLYHLFLQRNPLFSGGVSIAGHSLGSLILFDLLTNQKASPEEEEGEVGVIHRAPGGVPAGERRLQKAPEKGGEQTPGWLCSQGHRLASSSRGIEEVKEILKELELSEYCDVFEKEKMDGKALFLCTENNLKEMGIPLGPRMKILHYISSQRQMQDQSSAVPRHPGGQGAPPGSPSQHQDSPEDNRNCQYRDIGLGQVSANYPQLDYKPTIFFAFGSPIGMFLTVRGVKRINPNYSLPTCKGFFNIFHPFDPVAYRIEPMIVPDLEFEPMLLPHHKGRKRMHLELKEGLTRMSLDLKNNLLGSLRVAWQSFTRAQLPALEAASTDTGTSTEPEPEAAAEKEPALKSEEPSVAGKEEGSLINVGRLNGGNRIDYVLQEKPIESFNEYLFALQGHLCYWESEDTVLLVLKEIYQTKGITLDQPLPGGQ
SIO_010081: DDHD2
subclass of: SO_0000673
so part of: DDHD2
location: complement(join(832224..832314,832539..832701,833088..833264,833362..833464,833540..833695,833785..833910,834203..834298,834458..834750,835559..835767,836028..836163,837099..837188,837727..837847,838082..838171,838968..839158,840255..840438))
location: region:832224-840438:-1
so has part: feature:840255-840438:-1:exon
so has part: feature:838968-839158:-1:exon
so has part: feature:838082-838171:-1:exon
so has part: feature:837727-837847:-1:exon
so has part: feature:837099-837188:-1:exon
so has part: feature:836028-836163:-1:exon
so has part: feature:835559-835767:-1:exon
so has part: feature:834458-834750:-1:exon
so has part: feature:834203-834298:-1:exon
so has part: feature:833785-833910:-1:exon
so has part: feature:833540-833695:-1:exon
so has part: feature:833362-833464:-1:exon
so has part: feature:833088-833264:-1:exon
so has part: feature:832539-832701:-1:exon
so has part: feature:832224-832314:-1:exon

XP_030319875.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:840255-840438:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:838968-839158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:838082-838171:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:837727-837847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:837099-837188:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:836028-836163:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:835559-835767:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:834458-834750:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:834203-834298:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:833785-833910:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:833540-833695:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:833362-833464:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:833088-833264:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:832539-832701:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:832224-832314:-1:exon

DDHD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: DDHD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipase DDHD2 isoform X1
translation: MSTRDQPPAQPPSAEAVEPEGANRYEAVVPHWFYRKVNDPRERWVPFSMQDSERLEEAHCSGGGEADVVVPTSGGRYDVLLGQRQRVAVYWEEEVAEVRRCTWFYKGDKDNKYIPYSEAFSEELEEAYMVAVTLDEWKKKLESPSREVIILHNPKLMVHYQPAASSDEWGSTPTEQGRPRTVKRGVENIAAEIPNGEPLQIDHLVFVVHGIGPACDIRFRSIVQCVNDFRNVSLSMLQAHFRKAQEQQQIGRVEFLPVNWHSSLHSTGVDVDLERITLPSINRLRHFINDTILDVFFYNSSTYCQTIVDTVASEMNRLYHLFLQRNPLFSGGVSIAGHSLGSLILFDLLTNQKASPEEEEGEVGVIHRAPGGVPAGERRLQKAPEKGGEQTPGWLCSQGHRLASSSRGIEEVKEILKELELSEYCDVFEKEKMDGKALFLCTENNLKEMGIPLGPRMKILHYISSQRQMQDQSSAVPRHPGGQGAPPGSPSQHQDSPEDNRNCQYRDIGLGQVSANYPQLDYKPTIFFAFGSPIGMFLTVRGVKRINPNYSLPTCKGFFNIFHPFDPVAYRIEPMIVPDLEFEPMLLPHHKGRKRMHLELKEGLTRMSLDLKNNLLGSLRVAWQSFTRAQLPALEAASTDTGTSTEPEPEAAAEKEPALKSEEPSVAGKEEGSLINVGRLNGGNRIDYVLQEKPIESFNEYLFALQGHLCYWESEDTVLLVLKEIYQTKGITLDQPLPGGQ
SIO_010081: DDHD2
subclass of: SO_0000673
so part of: DDHD2
location: complement(join(832224..832314,832539..832701,833088..833264,833362..833464,833540..833695,833785..833910,834203..834298,834458..834750,835559..835767,836028..836163,837099..837188,837727..837847,838082..838171,838968..839158,840255..840438))
location: region:832224-840438:-1
so has part: feature:840255-840438:-1:exon
so has part: feature:838968-839158:-1:exon
so has part: feature:838082-838171:-1:exon
so has part: feature:837727-837847:-1:exon
so has part: feature:837099-837188:-1:exon
so has part: feature:836028-836163:-1:exon
so has part: feature:835559-835767:-1:exon
so has part: feature:834458-834750:-1:exon
so has part: feature:834203-834298:-1:exon
so has part: feature:833785-833910:-1:exon
so has part: feature:833540-833695:-1:exon
so has part: feature:833362-833464:-1:exon
so has part: feature:833088-833264:-1:exon
so has part: feature:832539-832701:-1:exon
so has part: feature:832224-832314:-1:exon

XP_030319876.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:840255-840438:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:838968-839158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:838082-838171:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:837727-837847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:837099-837188:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:836028-836163:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:835559-835767:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:834458-834750:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:834203-834298:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:833785-833910:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:833540-833695:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:833362-833464:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:833088-833264:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:832539-832701:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:832224-832314:-1:exon

BAG4
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: BAG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(845276..849853)
location: region:845276-849853:-1
so has part: feature:845276-849853:-1:exon
subclass of: SO_0000010

103535388
type: Gene
SIO_000068: ncbigene

position:845276:-1
position: 845276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:849853:-1
position: 849853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:845276-849853:-1:exon

BAG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: BAG4
product: BCL2 associated athanogene 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030464045.1
SIO_010081: BAG4
subclass of: SO_0000673
so part of: BAG4
location: complement(join(845276..846663,847254..847481,847682..847945,849749..849853))
location: region:845276-849853:-1
so has part: feature:849749-849853:-1:exon
so has part: feature:847682-847945:-1:exon
so has part: feature:847254-847481:-1:exon
so has part: feature:845276-846663:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:849749-849853:-1:exon

position:849749:-1
position: 849749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:847682-847945:-1:exon

position:847682:-1
position: 847682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:847945:-1
position: 847945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:847254-847481:-1:exon

position:847254:-1
position: 847254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:847481:-1
position: 847481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:845276-846663:-1:exon

position:846663:-1
position: 846663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BAG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: BAG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BAG family molecular chaperone regulator 4
translation: MQPCGRCADPGPVRPPGSLRPPAAPQAMDSPYANGAYSPPYPPAPGAAPHYPSLTQARGYYCSGPPRTPYPADSTAMYRPPSPTAPWSYGPPQDCPSEGSSLRRQQVHGYSPPQTPGMPIPQYPYGESNPGVTPQPGPPEDTWAPHPVYGVQPRYAWPAASAHGNPFSSESHPSWAGSTALSHPPAWDTKDAAYDRAEQSTNQHSYYPEVNHQHCGTTNGHKAAPSLPPNPPPKVQYSAQPQMYKRAPRKLPPGSSKPEVQPSAGVQPEIQRILHVMGEAEQLEQEVDEFVGKKTDKSYRLLEEMLTKLLLELDSIETGGQEGVRQARKESVHRIQAILEKLERKGL
SIO_010081: BAG4
subclass of: SO_0000673
so part of: BAG4
location: complement(join(846190..846663,847254..847481,847682..847945,849749..849826))
location: region:846190-849826:-1
so has part: feature:849749-849826:-1:exon
so has part: feature:847682-847945:-1:exon
so has part: feature:847254-847481:-1:exon
so has part: feature:846190-846663:-1:exon

XP_030319905.1
type: Protein
SIO_000068: ncbiprotein

position:846190:-1
position: 846190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:849826:-1
position: 849826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:849749-849826:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:847682-847945:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:847254-847481:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846190-846663:-1:exon

LSM1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LSM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 849947..852706
location: region:849947-852706:1
so has part: feature:849947-852706:1:exon
subclass of: SO_0000010

115599544
type: Gene
SIO_000068: ncbigene

position:849947:1
position: 849947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:852706:1
position: 852706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:849947-852706:1:exon

LSM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LSM1
product: LSM1 homolog, mRNA degradation associated, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 long SRA read, 15 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030464058.1
SIO_010081: LSM1
subclass of: SO_0000673
so part of: LSM1
location: join(849947..850045,850644..850712,851388..851503,852181..852700)
location: region:849947-852700:1
so has part: feature:849947-850045:1:exon
so has part: feature:850644-850712:1:exon
so has part: feature:851388-851503:1:exon
so has part: feature:852181-852700:1:exon

position:852700:1
position: 852700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:849947-850045:1:exon

position:850045:1
position: 850045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:850644-850712:1:exon

position:850644:1
position: 850644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:850712:1
position: 850712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:851388-851503:1:exon

position:851388:1
position: 851388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:851503:1
position: 851503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:852181-852700:1:exon

position:852181:1
position: 852181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LSM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LSM1
product: LSM1 homolog, mRNA degradation associated, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_030464057.1
SIO_010081: LSM1
subclass of: SO_0000673
so part of: LSM1
location: join(849948..850045,850644..850712,851388..851503,852181..852288,852477..852706)
location: region:849948-852706:1
so has part: feature:849948-850045:1:exon
so has part: feature:850644-850712:1:exon
so has part: feature:851388-851503:1:exon
so has part: feature:852181-852288:1:exon
so has part: feature:852477-852706:1:exon

position:849948:1
position: 849948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:849948-850045:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:850644-850712:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:851388-851503:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:852181-852288:1:exon

position:852288:1
position: 852288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:852477-852706:1:exon

position:852477:1
position: 852477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LSM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LSM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U6 snRNA-associated Sm-like protein LSm1 isoform X1
translation: MNYMPGTASLIQDIDKKHLVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEEQRVEQQAKQESEKLKVTGEQTMPLVPPGGEGGEEVLGCPQRQPGVLGSHECLCSGGESRGPSGLFAFFPPPSLVTPGESFSLMCK
SIO_010081: LSM1
subclass of: SO_0000673
so part of: LSM1
location: join(850000..850045,850644..850712,851388..851503,852181..852288,852477..852689)
location: region:850000-852689:1
so has part: feature:850000-850045:1:exon
so has part: feature:850644-850712:1:exon
so has part: feature:851388-851503:1:exon
so has part: feature:852181-852288:1:exon
so has part: feature:852477-852689:1:exon

XP_030319917.1
type: Protein
SIO_000068: ncbiprotein

position:850000:1
position: 850000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:852689:1
position: 852689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:850000-850045:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:850644-850712:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:851388-851503:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:852181-852288:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:852477-852689:1:exon

LSM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LSM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U6 snRNA-associated Sm-like protein LSm1 isoform X2
translation: MNYMPGTASLIQDIDKKHLVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEEQRVEQQAKQESEKLKVQALKERGLSVPRADTLDEY
SIO_010081: LSM1
subclass of: SO_0000673
so part of: LSM1
location: join(850000..850045,850644..850712,851388..851503,852181..852351)
location: region:850000-852351:1
so has part: feature:850000-850045:1:exon
so has part: feature:850644-850712:1:exon
so has part: feature:851388-851503:1:exon
so has part: feature:852181-852351:1:exon

XP_030319918.1
type: Protein
SIO_000068: ncbiprotein

position:852351:1
position: 852351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:850000-850045:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:850644-850712:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:851388-851503:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:852181-852351:1:exon

LOC115599539
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599539
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 853949..861401
location: region:853949-861401:1
so has part: feature:853949-861401:1:exon
subclass of: SO_0000010

115599539
type: Gene
SIO_000068: ncbigene

position:853949:1
position: 853949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:861401:1
position: 861401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:853949-861401:1:exon

LOC115599539
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC115599539
product: G protein-coupled receptor kinase 5-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030464030.1
SIO_010081: LOC115599539
subclass of: SO_0000673
so part of: LOC115599539
location: join(853949..854069,857034..857129,857269..857408,857915..857992,858303..858403,858499..858591,858686..858749,858843..858983,859067..859257,859335..859372,859560..859649,859749..859957,860056..860193,860277..860429,860508..860639,860755..861401)
location: region:853949-861401:1
so has part: feature:853949-854069:1:exon
so has part: feature:857034-857129:1:exon
so has part: feature:857269-857408:1:exon
so has part: feature:857915-857992:1:exon
so has part: feature:858303-858403:1:exon
so has part: feature:858499-858591:1:exon
so has part: feature:858686-858749:1:exon
so has part: feature:858843-858983:1:exon
so has part: feature:859067-859257:1:exon
so has part: feature:859335-859372:1:exon
so has part: feature:859560-859649:1:exon
so has part: feature:859749-859957:1:exon
so has part: feature:860056-860193:1:exon
so has part: feature:860277-860429:1:exon
so has part: feature:860508-860639:1:exon
so has part: feature:860755-861401:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:853949-854069:1:exon

position:854069:1
position: 854069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:857034-857129:1:exon

position:857034:1
position: 857034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:857129:1
position: 857129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:857269-857408:1:exon

position:857269:1
position: 857269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:857408:1
position: 857408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:857915-857992:1:exon

position:857915:1
position: 857915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:857992:1
position: 857992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:858303-858403:1:exon

position:858303:1
position: 858303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:858403:1
position: 858403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:858499-858591:1:exon

position:858499:1
position: 858499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:858591:1
position: 858591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:858686-858749:1:exon

position:858686:1
position: 858686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:858749:1
position: 858749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:858843-858983:1:exon

position:858843:1
position: 858843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:858983:1
position: 858983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:859067-859257:1:exon

position:859067:1
position: 859067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:859257:1
position: 859257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:859335-859372:1:exon

position:859335:1
position: 859335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:859372:1
position: 859372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:859560-859649:1:exon

position:859560:1
position: 859560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:859649:1
position: 859649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:859749-859957:1:exon

position:859749:1
position: 859749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:859957:1
position: 859957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:860056-860193:1:exon

position:860056:1
position: 860056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:860193:1
position: 860193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:860277-860429:1:exon

position:860277:1
position: 860277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:860429:1
position: 860429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:860508-860639:1:exon

position:860508:1
position: 860508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:860639:1
position: 860639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:860755-861401:1:exon

position:860755:1
position: 860755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115599539
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC115599539
product: G protein-coupled receptor kinase 5-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030464031.1
SIO_010081: LOC115599539
subclass of: SO_0000673
so part of: LOC115599539
location: join(853949..854069,857034..857129,857269..857408,857915..857992,858303..858403,858499..858591,858686..858749,858843..858983,859067..859257,859335..859372,859560..859649,859749..859957,860056..860193,860292..860429,860508..860639,860755..861401)
location: region:853949-861401:1
so has part: feature:853949-854069:1:exon
so has part: feature:857034-857129:1:exon
so has part: feature:857269-857408:1:exon
so has part: feature:857915-857992:1:exon
so has part: feature:858303-858403:1:exon
so has part: feature:858499-858591:1:exon
so has part: feature:858686-858749:1:exon
so has part: feature:858843-858983:1:exon
so has part: feature:859067-859257:1:exon
so has part: feature:859335-859372:1:exon
so has part: feature:859560-859649:1:exon
so has part: feature:859749-859957:1:exon
so has part: feature:860056-860193:1:exon
so has part: feature:860292-860429:1:exon
so has part: feature:860508-860639:1:exon
so has part: feature:860755-861401:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:853949-854069:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:857034-857129:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:857269-857408:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:857915-857992:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:858303-858403:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:858499-858591:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:858686-858749:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:858843-858983:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:859067-859257:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:859335-859372:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:859560-859649:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:859749-859957:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:860056-860193:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:860292-860429:1:exon

position:860292:1
position: 860292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:860508-860639:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:860755-861401:1:exon

LOC115599539
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC115599539
product: G protein-coupled receptor kinase 5-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030464032.1
SIO_010081: LOC115599539
subclass of: SO_0000673
so part of: LOC115599539
location: join(853949..854069,857034..857129,857269..857381,857915..857992,858303..858403,858499..858591,858686..858749,858843..858983,859067..859257,859335..859372,859560..859649,859749..859957,860056..860193,860277..860429,860508..860639,860755..861401)
location: region:853949-861401:1
so has part: feature:853949-854069:1:exon
so has part: feature:857034-857129:1:exon
so has part: feature:857269-857381:1:exon
so has part: feature:857915-857992:1:exon
so has part: feature:858303-858403:1:exon
so has part: feature:858499-858591:1:exon
so has part: feature:858686-858749:1:exon
so has part: feature:858843-858983:1:exon
so has part: feature:859067-859257:1:exon
so has part: feature:859335-859372:1:exon
so has part: feature:859560-859649:1:exon
so has part: feature:859749-859957:1:exon
so has part: feature:860056-860193:1:exon
so has part: feature:860277-860429:1:exon
so has part: feature:860508-860639:1:exon
so has part: feature:860755-861401:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:853949-854069:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:857034-857129:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:857269-857381:1:exon

position:857381:1
position: 857381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:857915-857992:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:858303-858403:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:858499-858591:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:858686-858749:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:858843-858983:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:859067-859257:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:859335-859372:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:859560-859649:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:859749-859957:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:860056-860193:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:860277-860429:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:860508-860639:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:860755-861401:1:exon

LOC115599539
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC115599539
product: G protein-coupled receptor kinase 5-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030464033.1
SIO_010081: LOC115599539
subclass of: SO_0000673
so part of: LOC115599539
location: join(853949..854069,857034..857129,857269..857381,857915..857992,858303..858403,858499..858591,858686..858749,858843..858983,859067..859257,859335..859372,859560..859649,859749..859957,860056..860193,860292..860429,860508..860639,860755..861401)
location: region:853949-861401:1
so has part: feature:853949-854069:1:exon
so has part: feature:857034-857129:1:exon
so has part: feature:857269-857381:1:exon
so has part: feature:857915-857992:1:exon
so has part: feature:858303-858403:1:exon
so has part: feature:858499-858591:1:exon
so has part: feature:858686-858749:1:exon
so has part: feature:858843-858983:1:exon
so has part: feature:859067-859257:1:exon
so has part: feature:859335-859372:1:exon
so has part: feature:859560-859649:1:exon
so has part: feature:859749-859957:1:exon
so has part: feature:860056-860193:1:exon
so has part: feature:860292-860429:1:exon
so has part: feature:860508-860639:1:exon
so has part: feature:860755-861401:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:853949-854069:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:857034-857129:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:857269-857381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:857915-857992:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:858303-858403:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:858499-858591:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:858686-858749:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:858843-858983:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:859067-859257:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:859335-859372:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:859560-859649:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:859749-859957:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:860056-860193:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:860292-860429:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:860508-860639:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:860755-861401:1:exon

LOC115599539
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC115599539
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein-coupled receptor kinase 5-like isoform X1
translation: MELENIVANTVLLKAREGGGGKRKGRSKKWREILRFPHISQCQELRKGLEQDYGSLCQRQPLGRLLFRQFCQTRPELLRCIRFLDAVVRDPRAETGGDYELSPDEKRKEMGEEIIRQFLQQESPDFLPELGQPHASRFLQDLQQGPCKDLFSSCLQPLHEYLSGEPFADYRDSMYFDRFLQWKYLERQSVTKDTFRQYRILGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTMMNGGDLKFHIYNMGNPGFEDERVVFYAAEICCGLQHLHQEGIVYRDLKPENILLDDDGHIRISDLGLAIKIPEGETIRGRVGTVGYMAPEVINNERYSFSPDWWGLGCLVYEMIEGQSPFRARKERVKREEVEKRVQEEQEPYSDKFSEDARAICQMLLAKDPKQRLGCGAEGAAEVKSHPFFRTINFKRLEAGIMTPSFVPDLCLPQPRAVYCKDVLDIEQFSTVKGVNLDQTDNDFYAKFATGSVSIPWQNEMIETECFKDLNVFGPSGTRSPDLDWQQLPEPPKRSLLQRLFRRQPTDCTPGTTIHPLHPTTVNSHPPTANSAPDPS
SIO_010081: LOC115599539
subclass of: SO_0000673
so part of: LOC115599539
location: join(854018..854069,857034..857129,857269..857408,857915..857992,858303..858403,858499..858591,858686..858749,858843..858983,859067..859257,859335..859372,859560..859649,859749..859957,860056..860193,860277..860429,860508..860639,860755..860853)
location: region:854018-860853:1
so has part: feature:854018-854069:1:exon
so has part: feature:857034-857129:1:exon
so has part: feature:857269-857408:1:exon
so has part: feature:857915-857992:1:exon
so has part: feature:858303-858403:1:exon
so has part: feature:858499-858591:1:exon
so has part: feature:858686-858749:1:exon
so has part: feature:858843-858983:1:exon
so has part: feature:859067-859257:1:exon
so has part: feature:859335-859372:1:exon
so has part: feature:859560-859649:1:exon
so has part: feature:859749-859957:1:exon
so has part: feature:860056-860193:1:exon
so has part: feature:860277-860429:1:exon
so has part: feature:860508-860639:1:exon
so has part: feature:860755-860853:1:exon

XP_030319890.1
type: Protein
SIO_000068: ncbiprotein

position:854018:1
position: 854018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:860853:1
position: 860853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:854018-854069:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:857034-857129:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:857269-857408:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:857915-857992:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:858303-858403:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:858499-858591:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:858686-858749:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:858843-858983:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:859067-859257:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:859335-859372:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:859560-859649:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:859749-859957:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:860056-860193:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:860277-860429:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:860508-860639:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:860755-860853:1:exon

LOC115599539
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC115599539
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein-coupled receptor kinase 5-like isoform X2
translation: MELENIVANTVLLKAREGGGGKRKGRSKKWREILRFPHISQCQELRKGLEQDYGSLCQRQPLGRLLFRQFCQTRPELLRCIRFLDAVVRDPRAETGGDYELSPDEKRKEMGEEIIRQFLQQESPDFLPELGQPHASRFLQDLQQGPCKDLFSSCLQPLHEYLSGEPFADYRDSMYFDRFLQWKYLERQSVTKDTFRQYRILGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTMMNGGDLKFHIYNMGNPGFEDERVVFYAAEICCGLQHLHQEGIVYRDLKPENILLDDDGHIRISDLGLAIKIPEGETIRGRVGTVGYMAPEVINNERYSFSPDWWGLGCLVYEMIEGQSPFRARKERVKREEVEKRVQEEQEPYSDKFSEDARAICQMLLAKDPKQRLGCGAEGAAEVKSHPFFRTINFKRLEAGIMTPSFVPDPRAVYCKDVLDIEQFSTVKGVNLDQTDNDFYAKFATGSVSIPWQNEMIETECFKDLNVFGPSGTRSPDLDWQQLPEPPKRSLLQRLFRRQPTDCTPGTTIHPLHPTTVNSHPPTANSAPDPS
SIO_010081: LOC115599539
subclass of: SO_0000673
so part of: LOC115599539
location: join(854018..854069,857034..857129,857269..857408,857915..857992,858303..858403,858499..858591,858686..858749,858843..858983,859067..859257,859335..859372,859560..859649,859749..859957,860056..860193,860292..860429,860508..860639,860755..860853)
location: region:854018-860853:1
so has part: feature:854018-854069:1:exon
so has part: feature:857034-857129:1:exon
so has part: feature:857269-857408:1:exon
so has part: feature:857915-857992:1:exon
so has part: feature:858303-858403:1:exon
so has part: feature:858499-858591:1:exon
so has part: feature:858686-858749:1:exon
so has part: feature:858843-858983:1:exon
so has part: feature:859067-859257:1:exon
so has part: feature:859335-859372:1:exon
so has part: feature:859560-859649:1:exon
so has part: feature:859749-859957:1:exon
so has part: feature:860056-860193:1:exon
so has part: feature:860292-860429:1:exon
so has part: feature:860508-860639:1:exon
so has part: feature:860755-860853:1:exon

XP_030319891.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:854018-854069:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:857034-857129:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:857269-857408:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:857915-857992:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:858303-858403:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:858499-858591:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:858686-858749:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:858843-858983:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:859067-859257:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:859335-859372:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:859560-859649:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:859749-859957:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:860056-860193:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:860292-860429:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:860508-860639:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:860755-860853:1:exon

LOC115599539
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC115599539
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein-coupled receptor kinase 5-like isoform X3
translation: MELENIVANTVLLKAREGGGGKRKGRSKKWREILRFPHISQCQELRKGLEQDYGSLCQRQPLGRLLFRQFCQTRPELLRCIRFLDAVGDYELSPDEKRKEMGEEIIRQFLQQESPDFLPELGQPHASRFLQDLQQGPCKDLFSSCLQPLHEYLSGEPFADYRDSMYFDRFLQWKYLERQSVTKDTFRQYRILGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTMMNGGDLKFHIYNMGNPGFEDERVVFYAAEICCGLQHLHQEGIVYRDLKPENILLDDDGHIRISDLGLAIKIPEGETIRGRVGTVGYMAPEVINNERYSFSPDWWGLGCLVYEMIEGQSPFRARKERVKREEVEKRVQEEQEPYSDKFSEDARAICQMLLAKDPKQRLGCGAEGAAEVKSHPFFRTINFKRLEAGIMTPSFVPDLCLPQPRAVYCKDVLDIEQFSTVKGVNLDQTDNDFYAKFATGSVSIPWQNEMIETECFKDLNVFGPSGTRSPDLDWQQLPEPPKRSLLQRLFRRQPTDCTPGTTIHPLHPTTVNSHPPTANSAPDPS
SIO_010081: LOC115599539
subclass of: SO_0000673
so part of: LOC115599539
location: join(854018..854069,857034..857129,857269..857381,857915..857992,858303..858403,858499..858591,858686..858749,858843..858983,859067..859257,859335..859372,859560..859649,859749..859957,860056..860193,860277..860429,860508..860639,860755..860853)
location: region:854018-860853:1
so has part: feature:854018-854069:1:exon
so has part: feature:857034-857129:1:exon
so has part: feature:857269-857381:1:exon
so has part: feature:857915-857992:1:exon
so has part: feature:858303-858403:1:exon
so has part: feature:858499-858591:1:exon
so has part: feature:858686-858749:1:exon
so has part: feature:858843-858983:1:exon
so has part: feature:859067-859257:1:exon
so has part: feature:859335-859372:1:exon
so has part: feature:859560-859649:1:exon
so has part: feature:859749-859957:1:exon
so has part: feature:860056-860193:1:exon
so has part: feature:860277-860429:1:exon
so has part: feature:860508-860639:1:exon
so has part: feature:860755-860853:1:exon

XP_030319892.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:854018-854069:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:857034-857129:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:857269-857381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:857915-857992:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:858303-858403:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:858499-858591:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:858686-858749:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:858843-858983:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:859067-859257:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:859335-859372:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:859560-859649:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:859749-859957:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:860056-860193:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:860277-860429:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:860508-860639:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:860755-860853:1:exon

LOC115599539
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC115599539
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein-coupled receptor kinase 5-like isoform X4
translation: MELENIVANTVLLKAREGGGGKRKGRSKKWREILRFPHISQCQELRKGLEQDYGSLCQRQPLGRLLFRQFCQTRPELLRCIRFLDAVGDYELSPDEKRKEMGEEIIRQFLQQESPDFLPELGQPHASRFLQDLQQGPCKDLFSSCLQPLHEYLSGEPFADYRDSMYFDRFLQWKYLERQSVTKDTFRQYRILGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTMMNGGDLKFHIYNMGNPGFEDERVVFYAAEICCGLQHLHQEGIVYRDLKPENILLDDDGHIRISDLGLAIKIPEGETIRGRVGTVGYMAPEVINNERYSFSPDWWGLGCLVYEMIEGQSPFRARKERVKREEVEKRVQEEQEPYSDKFSEDARAICQMLLAKDPKQRLGCGAEGAAEVKSHPFFRTINFKRLEAGIMTPSFVPDPRAVYCKDVLDIEQFSTVKGVNLDQTDNDFYAKFATGSVSIPWQNEMIETECFKDLNVFGPSGTRSPDLDWQQLPEPPKRSLLQRLFRRQPTDCTPGTTIHPLHPTTVNSHPPTANSAPDPS
SIO_010081: LOC115599539
subclass of: SO_0000673
so part of: LOC115599539
location: join(854018..854069,857034..857129,857269..857381,857915..857992,858303..858403,858499..858591,858686..858749,858843..858983,859067..859257,859335..859372,859560..859649,859749..859957,860056..860193,860292..860429,860508..860639,860755..860853)
location: region:854018-860853:1
so has part: feature:854018-854069:1:exon
so has part: feature:857034-857129:1:exon
so has part: feature:857269-857381:1:exon
so has part: feature:857915-857992:1:exon
so has part: feature:858303-858403:1:exon
so has part: feature:858499-858591:1:exon
so has part: feature:858686-858749:1:exon
so has part: feature:858843-858983:1:exon
so has part: feature:859067-859257:1:exon
so has part: feature:859335-859372:1:exon
so has part: feature:859560-859649:1:exon
so has part: feature:859749-859957:1:exon
so has part: feature:860056-860193:1:exon
so has part: feature:860292-860429:1:exon
so has part: feature:860508-860639:1:exon
so has part: feature:860755-860853:1:exon

XP_030319893.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:854018-854069:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:857034-857129:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:857269-857381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:857915-857992:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:858303-858403:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:858499-858591:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:858686-858749:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:858843-858983:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:859067-859257:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:859335-859372:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:859560-859649:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:859749-859957:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:860056-860193:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:860292-860429:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:860508-860639:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:860755-860853:1:exon

STAR
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: STAR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 862114..869195
location: region:862114-869195:1
so has part: feature:862114-869195:1:exon
subclass of: SO_0000010

103535391
type: Gene
SIO_000068: ncbigene

position:862114:1
position: 862114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:869195:1
position: 869195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:862114-869195:1:exon

STAR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: STAR
product: steroidogenic acute regulatory protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030464053.1
SIO_010081: STAR
subclass of: SO_0000673
so part of: STAR
location: join(862114..862185,862586..862879,865330..865443,865645..865772,865858..866016,867176..867360,868504..868597,868681..869195)
location: region:862114-869195:1
so has part: feature:862114-862185:1:exon
so has part: feature:862586-862879:1:exon
so has part: feature:865330-865443:1:exon
so has part: feature:865645-865772:1:exon
so has part: feature:865858-866016:1:exon
so has part: feature:867176-867360:1:exon
so has part: feature:868504-868597:1:exon
so has part: feature:868681-869195:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:862114-862185:1:exon

position:862185:1
position: 862185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:862586-862879:1:exon

position:862586:1
position: 862586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:862879:1
position: 862879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:865330-865443:1:exon

position:865330:1
position: 865330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865443:1
position: 865443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:865645-865772:1:exon

position:865645:1
position: 865645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865772:1
position: 865772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:865858-866016:1:exon

position:865858:1
position: 865858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:866016:1
position: 866016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:867176-867360:1:exon

position:867176:1
position: 867176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:867360:1
position: 867360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:868504-868597:1:exon

position:868504:1
position: 868504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868597:1
position: 868597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:868681-869195:1:exon

position:868681:1
position: 868681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STAR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: STAR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: steroidogenic acute regulatory protein, mitochondrial isoform X1
translation: MVPPAPPSAGPRAGDVSSGVGIPGVSGKFPLGVMERSSPSLGKAPPGAAEPSLDGLRRQAAVAISQELSRLACHSTGPSTWIHQVRRRSSLLSSRLEEKPFSEMEMSYIKQGEEALQKSLSILEDREGWKTETVVNNGDKVLSKVLPDVGKVFRLEVVVDQPLDRVYGELVDKMEQMGDWNPSVKEVKILQKIGKDTVITHEKAAATPGNIVGPRDFVSVRCSKRRGSTCVLAGMATKYGAMPEQEGFIRAENGPTCMVLRPLAGSPAQTKLTWLLSIDLKGWLPKSIINQVLSQTQVDFANHLRERLAGPVARSC
SIO_010081: STAR
subclass of: SO_0000673
so part of: STAR
location: join(862717..862879,865330..865443,865645..865772,865858..866016,867176..867360,868504..868597,868681..868788)
location: region:862717-868788:1
so has part: feature:862717-862879:1:exon
so has part: feature:865330-865443:1:exon
so has part: feature:865645-865772:1:exon
so has part: feature:865858-866016:1:exon
so has part: feature:867176-867360:1:exon
so has part: feature:868504-868597:1:exon
so has part: feature:868681-868788:1:exon

XP_030319913.1
type: Protein
SIO_000068: ncbiprotein

position:862717:1
position: 862717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868788:1
position: 868788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:862717-862879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:865330-865443:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:865645-865772:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:865858-866016:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:867176-867360:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:868504-868597:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:868681-868788:1:exon

STAR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: STAR
product: steroidogenic acute regulatory protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_008501441.2
SIO_010081: STAR
subclass of: SO_0000673
so part of: STAR
location: join(862796..862879,864766..864908,865330..865443,865645..865772,865858..866016,867176..867360,868504..868597,868681..869195)
location: region:862796-869195:1
so has part: feature:862796-862879:1:exon
so has part: feature:864766-864908:1:exon
so has part: feature:865330-865443:1:exon
so has part: feature:865645-865772:1:exon
so has part: feature:865858-866016:1:exon
so has part: feature:867176-867360:1:exon
so has part: feature:868504-868597:1:exon
so has part: feature:868681-869195:1:exon

position:862796:1
position: 862796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:862796-862879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:864766-864908:1:exon

position:864766:1
position: 864766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:864908:1
position: 864908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:865330-865443:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:865645-865772:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:865858-866016:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:867176-867360:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:868504-868597:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:868681-869195:1:exon

STAR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: STAR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: steroidogenic acute regulatory protein, mitochondrial isoform X2
translation: MLPATSKLCAAISYRHLRNMTGLRRQAAVAISQELSRLACHSTGPSTWIHQVRRRSSLLSSRLEEKPFSEMEMSYIKQGEEALQKSLSILEDREGWKTETVVNNGDKVLSKVLPDVGKVFRLEVVVDQPLDRVYGELVDKMEQMGDWNPSVKEVKILQKIGKDTVITHEKAAATPGNIVGPRDFVSVRCSKRRGSTCVLAGMATKYGAMPEQEGFIRAENGPTCMVLRPLAGSPAQTKLTWLLSIDLKGWLPKSIINQVLSQTQVDFANHLRERLAGPVARSC
SIO_010081: STAR
subclass of: SO_0000673
so part of: STAR
location: join(864845..864908,865330..865443,865645..865772,865858..866016,867176..867360,868504..868597,868681..868788)
location: region:864845-868788:1
so has part: feature:864845-864908:1:exon
so has part: feature:865330-865443:1:exon
so has part: feature:865645-865772:1:exon
so has part: feature:865858-866016:1:exon
so has part: feature:867176-867360:1:exon
so has part: feature:868504-868597:1:exon
so has part: feature:868681-868788:1:exon

XP_008499663.1
type: Protein
SIO_000068: ncbiprotein

position:864845:1
position: 864845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:864845-864908:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:865330-865443:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:865645-865772:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:865858-866016:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:867176-867360:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:868504-868597:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:868681-868788:1:exon

LOC115599545
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599545
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 878189..883237
location: region:878189-883237:1
so has part: feature:878189-883237:1:exon

115599545
type: Gene
SIO_000068: ncbigene

position:878189:1
position: 878189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:883237:1
position: 883237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:878189-883237:1:exon

LOC115599545
type: Exon
subclass of: SO_0000147
RO_0002162: 9244
gene: LOC115599545
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115599545
subclass of: SO_0000673
so part of: LOC115599545
location: 878189..878224
location: region:878189-878224:1
so has part: feature:878189-878224:1:exon