Calypte anna isolate BGI_N300 chromosome 19, bCalAnn1_v1.p, whole genome shotgun sequence.
type: Entry
definition: Calypte anna isolate BGI_N300 chromosome 19, bCalAnn1_v1.p, whole genome shotgun sequence.
sequence version: NC_044264.1
sequence date: 2019-08-24
sequence: sequence
division: CON
label: NC_044264.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA558503
dblink: SAMN02265252
keyword: WGS
keyword: RefSeq
source: Calypte anna (Anna's hummingbird)
organism: Calypte anna
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Apodiformes; Trochilidae; Calypte.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM012131.1.\nAssembly name: bCalAnn1_v1.p\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2019/05/16. The original whole-genome shotgun project has the\naccession RRCD00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 26-SEP-2018\nAssembly Method :: FALCON v. 5.1.1; FALCON unzip v. 1.0.2;\n scaff10X v. git 4.28.2018; Bionano Solve\n DLS v. 3.2.1; Salsa2 HiC v. 2.0;\n smrtanalysis Arrow polishing & gap\n filling v. 5.1.0.26412; longranger align\n v. 2.2.2; freebayes v. 1.2.0;\n purge_haplotigs v. bit 7.10.2018; gEVAL\n manual curation v. 2018-09-07\nAssembly Name :: bCalAnn1_v1.p\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 54.0x\nSequencing Technology :: PacBio RSII; 10X Genomics linked reads;\n Bionano Genomics DLS; Arima Genomics HiC\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Calypte anna Annotation Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 11166003
topology: linear
so has quality: SO_0000987
location: 1..11166003
location: region:1-11166003:1
RO_0002162: 9244

NC_044264
type: RefSeq
SIO_000068: refseq

PRJNA558503
type: BioProject
SIO_000068: bioproject

SAMN02265252
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11166003:1
position: 11166003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-11166003:1:source
so part of: sequence
organism: Calypte anna
mol type: genomic DNA
isolate: BGI_N300
chromosome: 19
sex: female
country: USA

9244
type: Taxonomy
SIO_000068: taxonomy

EIF4H
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: EIF4H
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(49841..62023)
location: region:49841-62023:-1
so has part: feature:49841-62023:-1:exon
subclass of: SO_0000010

103536540
type: Gene
SIO_000068: ncbigene

position:49841:-1
position: 49841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62023:-1
position: 62023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49841-62023:-1:exon

EIF4H
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: EIF4H
product: eukaryotic translation initiation factor 4H, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 3 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030462294.1
SIO_010081: EIF4H
subclass of: SO_0000673
so part of: EIF4H
location: complement(join(49841..51853,51963..52121,54678..54777,54885..54949,55952..56136,61916..62023))
location: region:49841-62023:-1
so has part: feature:61916-62023:-1:exon
so has part: feature:55952-56136:-1:exon
so has part: feature:54885-54949:-1:exon
so has part: feature:54678-54777:-1:exon
so has part: feature:51963-52121:-1:exon
so has part: feature:49841-51853:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:61916-62023:-1:exon

position:61916:-1
position: 61916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:55952-56136:-1:exon

position:55952:-1
position: 55952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56136:-1
position: 56136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:54885-54949:-1:exon

position:54885:-1
position: 54885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54949:-1
position: 54949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:54678-54777:-1:exon

position:54678:-1
position: 54678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54777:-1
position: 54777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:51963-52121:-1:exon

position:51963:-1
position: 51963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52121:-1
position: 52121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:49841-51853:-1:exon

position:51853:-1
position: 51853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EIF4H
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: EIF4H
product: eukaryotic translation initiation factor 4H, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 2 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_030462293.1
SIO_010081: EIF4H
subclass of: SO_0000673
so part of: EIF4H
location: complement(join(49841..51853,51963..52121,53977..54042,54678..54777,54885..54949,55952..56136,61916..62023))
location: region:49841-62023:-1
so has part: feature:61916-62023:-1:exon
so has part: feature:55952-56136:-1:exon
so has part: feature:54885-54949:-1:exon
so has part: feature:54678-54777:-1:exon
so has part: feature:53977-54042:-1:exon
so has part: feature:51963-52121:-1:exon
so has part: feature:49841-51853:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:61916-62023:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:55952-56136:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:54885-54949:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:54678-54777:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:53977-54042:-1:exon

position:53977:-1
position: 53977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54042:-1
position: 54042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:51963-52121:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:49841-51853:-1:exon

EIF4H
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: EIF4H
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 4H isoform X2
translation: MADFDPYDDRAYSSFGGGRGSRGGGGLGSRRQKELPTEPPFTAYVGNLPFNTVQGDIDAIFKDLSVRSVRLVRDKETDKFKGFCYVEFDEVESLKEALTYDGALLGDRSLRVDIAEGRKQDKGGFGFRKGGGPEDRGFKDDDFLGGRGRGTRPGDRRPPGASMGSGGTGRFRDGPPLRGSSMDFREPTEEERAQRPRLQLKPRTVATPLNQVANPNSAIFGGAKPREEVVKEHD
SIO_010081: EIF4H
subclass of: SO_0000673
so part of: EIF4H
location: complement(join(51717..51853,51963..52121,54678..54777,54885..54949,55952..56136,61916..61974))
location: region:51717-61974:-1
so has part: feature:61916-61974:-1:exon
so has part: feature:55952-56136:-1:exon
so has part: feature:54885-54949:-1:exon
so has part: feature:54678-54777:-1:exon
so has part: feature:51963-52121:-1:exon
so has part: feature:51717-51853:-1:exon

XP_030318154.1
type: Protein
SIO_000068: ncbiprotein

position:51717:-1
position: 51717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61974:-1
position: 61974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61916-61974:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:55952-56136:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:54885-54949:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:54678-54777:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:51963-52121:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:51717-51853:-1:exon

EIF4H
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: EIF4H
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 4H isoform X1
translation: MADFDPYDDRAYSSFGGGRGSRGGGGLGSRRQKELPTEPPFTAYVGNLPFNTVQGDIDAIFKDLSVRSVRLVRDKETDKFKGFCYVEFDEVESLKEALTYDGALLGDRSLRVDIAEGRKQDKGGFGFRKGGGPEDRGMGGGSRESRGGGWDSRDDFNSGFKDDDFLGGRGRGTRPGDRRPPGASMGSGGTGRFRDGPPLRGSSMDFREPTEEERAQRPRLQLKPRTVATPLNQVANPNSAIFGGAKPREEVVKEHD
SIO_010081: EIF4H
subclass of: SO_0000673
so part of: EIF4H
location: complement(join(51717..51853,51963..52121,53977..54042,54678..54777,54885..54949,55952..56136,61916..61974))
location: region:51717-61974:-1
so has part: feature:61916-61974:-1:exon
so has part: feature:55952-56136:-1:exon
so has part: feature:54885-54949:-1:exon
so has part: feature:54678-54777:-1:exon
so has part: feature:53977-54042:-1:exon
so has part: feature:51963-52121:-1:exon
so has part: feature:51717-51853:-1:exon

XP_030318153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61916-61974:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:55952-56136:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:54885-54949:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:54678-54777:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:53977-54042:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:51963-52121:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:51717-51853:-1:exon

MYBBP1A
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: MYBBP1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 63430..120330
location: region:63430-120330:1
so has part: feature:63430-120330:1:exon
subclass of: SO_0000010

103536542
type: Gene
SIO_000068: ncbigene

position:63430:1
position: 63430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120330:1
position: 120330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63430-120330:1:exon

MYBBP1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MYBBP1A
product: MYB binding protein 1a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030462529.1
SIO_010081: MYBBP1A
subclass of: SO_0000673
so part of: MYBBP1A
location: join(63430..63616,63739..63834,64669..64752,65157..65231,65641..65748,66788..66978,67269..67436,68916..69033,71334..71623,72538..72645,73253..73378,74007..74210,74732..74840,75241..75328,76375..76526,77242..77331,77990..78130,78868..79032,79954..80111,80578..80712,81824..81932,84121..84252,85436..85504,104495..104608,116088..116189,117284..117408,119334..120330)
location: region:63430-120330:1
so has part: feature:63430-63616:1:exon
so has part: feature:63739-63834:1:exon
so has part: feature:64669-64752:1:exon
so has part: feature:65157-65231:1:exon
so has part: feature:65641-65748:1:exon
so has part: feature:66788-66978:1:exon
so has part: feature:67269-67436:1:exon
so has part: feature:68916-69033:1:exon
so has part: feature:71334-71623:1:exon
so has part: feature:72538-72645:1:exon
so has part: feature:73253-73378:1:exon
so has part: feature:74007-74210:1:exon
so has part: feature:74732-74840:1:exon
so has part: feature:75241-75328:1:exon
so has part: feature:76375-76526:1:exon
so has part: feature:77242-77331:1:exon
so has part: feature:77990-78130:1:exon
so has part: feature:78868-79032:1:exon
so has part: feature:79954-80111:1:exon
so has part: feature:80578-80712:1:exon
so has part: feature:81824-81932:1:exon
so has part: feature:84121-84252:1:exon
so has part: feature:85436-85504:1:exon
so has part: feature:104495-104608:1:exon
so has part: feature:116088-116189:1:exon
so has part: feature:117284-117408:1:exon
so has part: feature:119334-120330:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:63430-63616:1:exon

position:63616:1
position: 63616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:63739-63834:1:exon

position:63739:1
position: 63739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63834:1
position: 63834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:64669-64752:1:exon

position:64669:1
position: 64669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64752:1
position: 64752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:65157-65231:1:exon

position:65157:1
position: 65157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65231:1
position: 65231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:65641-65748:1:exon

position:65641:1
position: 65641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65748:1
position: 65748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:66788-66978:1:exon

position:66788:1
position: 66788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66978:1
position: 66978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:67269-67436:1:exon

position:67269:1
position: 67269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67436:1
position: 67436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:68916-69033:1:exon

position:68916:1
position: 68916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69033:1
position: 69033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:71334-71623:1:exon

position:71334:1
position: 71334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71623:1
position: 71623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:72538-72645:1:exon

position:72538:1
position: 72538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72645:1
position: 72645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:73253-73378:1:exon

position:73253:1
position: 73253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73378:1
position: 73378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:74007-74210:1:exon

position:74007:1
position: 74007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74210:1
position: 74210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:74732-74840:1:exon

position:74732:1
position: 74732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74840:1
position: 74840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:75241-75328:1:exon

position:75241:1
position: 75241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75328:1
position: 75328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:76375-76526:1:exon

position:76375:1
position: 76375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76526:1
position: 76526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:77242-77331:1:exon

position:77242:1
position: 77242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77331:1
position: 77331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:77990-78130:1:exon

position:77990:1
position: 77990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78130:1
position: 78130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:78868-79032:1:exon

position:78868:1
position: 78868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79032:1
position: 79032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:79954-80111:1:exon

position:79954:1
position: 79954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80111:1
position: 80111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:80578-80712:1:exon

position:80578:1
position: 80578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80712:1
position: 80712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:81824-81932:1:exon

position:81824:1
position: 81824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81932:1
position: 81932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:84121-84252:1:exon

position:84121:1
position: 84121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84252:1
position: 84252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:85436-85504:1:exon

position:85436:1
position: 85436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85504:1
position: 85504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:104495-104608:1:exon

position:104495:1
position: 104495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104608:1
position: 104608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:116088-116189:1:exon

position:116088:1
position: 116088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116189:1
position: 116189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:117284-117408:1:exon

position:117284:1
position: 117284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117408:1
position: 117408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:119334-120330:1:exon

position:119334:1
position: 119334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MYBBP1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MYBBP1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myb-binding protein 1A
translation: MAELEGAGGGVAAADPRGVLRQGRAFLDFFWDIAKPEQEVRLEATESLLRHLREGRKDDELKYALKRLVEGLGATREAARPGFSLALAQVLKAFEEISVCSVLDQIKEKHSLEKVKKKLVRNAAFGNFFGVMALFQSGRLVKDQKALLESIQLLQQLAHHQAHLRDLPRKALVDIMSEVPERVFEEVLFDILRSDLASAFTSPDSFHLLLVGMQKFPSVLKPKSLKKLFGSPTVVNEENIPRLVELLRSVAKSEKKDKKLPGLVFDLLQVSLKEDAFELFWKEGVENGLLKEKSGPVSYMCYRLLGTALPVLSLDQLQMVLQGKVMQHYGEHVVTTQLPDRFKFAPEMEKYVDEFLSSCDDPERQMAVLIGFSTLTNQGYPVFSSSSRVVRHLQPGVLQKYIHWLKDMFLRPDLDCCLDFSSNRQKQNQGNVNRAQQKIPRLRKWIIHRLANIIENAGIKDESLVMDIARFCFFHAFFEAKKKTSQICEASVLPSEPLDEQTHLAIENYFFGLLQTLNSLTVLGDTAKAAALREKHIHGVTADGKLWIFLIVEYADKLLSSEHVKAVKPFTKGQRDAWERTLQSVQNLQKKENKANSTKVFAFQQLLLLMAVHLFKNQSETMDVLSDLLNCTEKAFSKEPKKKKTDNSEPGWVEVMVEILLSLLAQPSLLIRRISKSVFVRICPNLTKRGLQLILDVLDPYQEQNEESAVVVMEESDKKTISAQDTDEEGSDDSSEEGSSEEENESGAEEMNEEVDDAFRSQLMNVLQAGNALGGGESDEELDDEAMMALDKNISALFAEQQKRIQAKKDEKDRIRKERILRRDFKIKVLDLIEAFLIKQSENPLVFDVIEPLLRVIEQCMSTDSDKQEVDFLQKTASIFRNSLCRTKQYCKRVDALQEDLHAFVERLVGKACKHTNSSVALYYFSASLYLLKVLKGNVSDKSSTPTPLPEKQSNTIPQAPQLLSTGCLDLERVTGIYQQALTHFLTKRNSALTCSMFHDLFKRFPIMCKPLVDTLVKSITAGARQHQQAQACLLLQKVLLLHELKLFMTEDEWEELIRKSISQVTESLRLSGKCLMKPDKEKVAKTLELLNLLLKTVTEQKLHVKLTELEKVLGALNHPGGIRSSARLDSLYWNVMRWLNHTKPKKEKTANKPAQEAENLRRKKKGFLPETKKRKNRKKGIQENGAGAGAGEAAASEETETPQQKKGLMAGSSKHKKKNKGGKENGVAMAGSREEAVNGGVPGSDKKKKKKKKRNRNRKRKGDAGNEAEQAPAAKKAKGSVSQETQQKQGKANHQGKVKKKRKVKTTPVQEE
SIO_010081: MYBBP1A
subclass of: SO_0000673
so part of: MYBBP1A
location: join(63446..63616,63739..63834,64669..64752,65157..65231,65641..65748,66788..66978,67269..67436,68916..69033,71334..71623,72538..72645,73253..73378,74007..74210,74732..74840,75241..75328,76375..76526,77242..77331,77990..78130,78868..79032,79954..80111,80578..80712,81824..81932,84121..84252,85436..85504,104495..104608,116088..116189,117284..117408,119334..119847)
location: region:63446-119847:1
so has part: feature:63446-63616:1:exon
so has part: feature:63739-63834:1:exon
so has part: feature:64669-64752:1:exon
so has part: feature:65157-65231:1:exon
so has part: feature:65641-65748:1:exon
so has part: feature:66788-66978:1:exon
so has part: feature:67269-67436:1:exon
so has part: feature:68916-69033:1:exon
so has part: feature:71334-71623:1:exon
so has part: feature:72538-72645:1:exon
so has part: feature:73253-73378:1:exon
so has part: feature:74007-74210:1:exon
so has part: feature:74732-74840:1:exon
so has part: feature:75241-75328:1:exon
so has part: feature:76375-76526:1:exon
so has part: feature:77242-77331:1:exon
so has part: feature:77990-78130:1:exon
so has part: feature:78868-79032:1:exon
so has part: feature:79954-80111:1:exon
so has part: feature:80578-80712:1:exon
so has part: feature:81824-81932:1:exon
so has part: feature:84121-84252:1:exon
so has part: feature:85436-85504:1:exon
so has part: feature:104495-104608:1:exon
so has part: feature:116088-116189:1:exon
so has part: feature:117284-117408:1:exon
so has part: feature:119334-119847:1:exon

XP_030318389.1
type: Protein
SIO_000068: ncbiprotein

position:63446:1
position: 63446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119847:1
position: 119847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63446-63616:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:63739-63834:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:64669-64752:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:65157-65231:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:65641-65748:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:66788-66978:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:67269-67436:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:68916-69033:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:71334-71623:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:72538-72645:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:73253-73378:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:74007-74210:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:74732-74840:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:75241-75328:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:76375-76526:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:77242-77331:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:77990-78130:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:78868-79032:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:79954-80111:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:80578-80712:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:81824-81932:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:84121-84252:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:85436-85504:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:104495-104608:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:116088-116189:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:117284-117408:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:119334-119847:1:exon

LOC103536543
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103536543
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(125525..261080)
location: region:125525-261080:-1
so has part: feature:125525-261080:-1:exon
subclass of: SO_0000010

103536543
type: Gene
SIO_000068: ncbigene

position:125525:-1
position: 125525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261080:-1
position: 261080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125525-261080:-1:exon

LOC103536543
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103536543
product: protein spinster homolog 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030462496.1
SIO_010081: LOC103536543
subclass of: SO_0000673
so part of: LOC103536543
location: complement(join(125525..128997,130294..130340,144329..144492,155086..155184,170637..170826,172461..172613,173751..173893,176509..176575,177689..177840,199222..199358,225945..226010,260680..261080))
location: region:125525-261080:-1
so has part: feature:260680-261080:-1:exon
so has part: feature:225945-226010:-1:exon
so has part: feature:199222-199358:-1:exon
so has part: feature:177689-177840:-1:exon
so has part: feature:176509-176575:-1:exon
so has part: feature:173751-173893:-1:exon
so has part: feature:172461-172613:-1:exon
so has part: feature:170637-170826:-1:exon
so has part: feature:155086-155184:-1:exon
so has part: feature:144329-144492:-1:exon
so has part: feature:130294-130340:-1:exon
so has part: feature:125525-128997:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:260680-261080:-1:exon

position:260680:-1
position: 260680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:225945-226010:-1:exon

position:225945:-1
position: 225945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226010:-1
position: 226010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:199222-199358:-1:exon

position:199222:-1
position: 199222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199358:-1
position: 199358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:177689-177840:-1:exon

position:177689:-1
position: 177689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177840:-1
position: 177840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:176509-176575:-1:exon

position:176509:-1
position: 176509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176575:-1
position: 176575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:173751-173893:-1:exon

position:173751:-1
position: 173751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173893:-1
position: 173893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:172461-172613:-1:exon

position:172461:-1
position: 172461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172613:-1
position: 172613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:170637-170826:-1:exon

position:170637:-1
position: 170637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170826:-1
position: 170826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:155086-155184:-1:exon

position:155086:-1
position: 155086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155184:-1
position: 155184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:144329-144492:-1:exon

position:144329:-1
position: 144329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144492:-1
position: 144492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:130294-130340:-1:exon

position:130294:-1
position: 130294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130340:-1
position: 130340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:125525-128997:-1:exon

position:128997:-1
position: 128997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103536543
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103536543
product: protein spinster homolog 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030462494.1
SIO_010081: LOC103536543
subclass of: SO_0000673
so part of: LOC103536543
location: complement(join(125525..128997,130294..130340,144329..144492,155086..155184,162455..162520,170637..170826,172461..172613,173751..173893,176509..176575,177689..177840,199222..199358,225945..226010,260680..261080))
location: region:125525-261080:-1
so has part: feature:260680-261080:-1:exon
so has part: feature:225945-226010:-1:exon
so has part: feature:199222-199358:-1:exon
so has part: feature:177689-177840:-1:exon
so has part: feature:176509-176575:-1:exon
so has part: feature:173751-173893:-1:exon
so has part: feature:172461-172613:-1:exon
so has part: feature:170637-170826:-1:exon
so has part: feature:162455-162520:-1:exon
so has part: feature:155086-155184:-1:exon
so has part: feature:144329-144492:-1:exon
so has part: feature:130294-130340:-1:exon
so has part: feature:125525-128997:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:260680-261080:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:225945-226010:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:199222-199358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:177689-177840:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:176509-176575:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:173751-173893:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:172461-172613:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:170637-170826:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:162455-162520:-1:exon

position:162455:-1
position: 162455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162520:-1
position: 162520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:155086-155184:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:144329-144492:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:130294-130340:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:125525-128997:-1:exon

LOC103536543
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103536543
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein spinster homolog 2 isoform X4
translation: MMCLESDGSSGSSPGCGGRLRAGDEEEEEDGERGCCGRGAEGEVQTLSGRMNPPAAGKHPERPTARHKAPNLGRARVAAAGILSVGNVLNYLDRYTVAGVLLDIQQHFGVKDSGAGLLQTVFICSFMVAAPIFGYLGDRFNRKIILSCGIFFWSGVTFSSSFITEKYFWLLVLSRGLVGIGEASYSTIAPTIIGDLFTKNTRTLMLSVFYFAIPLGSGLGYITGSSVKQVAGDWHWALRVSPLLGMITGTLILIFVPAAKRGNVEQLGGQLKARTSWLRDMKALIRNRSYVFSSLATSAVSFATGALGMWIPLYLHRAQVVQKTAETCSSQPCGTKDSLIFGAITCFTGFLGVITGAGATKWCRLKTQRADPLVCAVGMLGSAIFICLIFVAAKSSIVGAYYVVIPTRRATAVALQSFTSHLLGDAGSPYLIGFISDLIRQSTKESPVWEFLSLGYALMLCPFVVVLGGMFFLATALFFLSDRAKAEQQVNQLVMPPASVKV
SIO_010081: LOC103536543
subclass of: SO_0000673
so part of: LOC103536543
location: complement(join(130298..130340,144329..144492,155086..155184,170637..170826,172461..172613,173751..173893,176509..176575,177689..177840,199222..199358,225945..226010,260680..260974))
location: region:130298-260974:-1
so has part: feature:260680-260974:-1:exon
so has part: feature:225945-226010:-1:exon
so has part: feature:199222-199358:-1:exon
so has part: feature:177689-177840:-1:exon
so has part: feature:176509-176575:-1:exon
so has part: feature:173751-173893:-1:exon
so has part: feature:172461-172613:-1:exon
so has part: feature:170637-170826:-1:exon
so has part: feature:155086-155184:-1:exon
so has part: feature:144329-144492:-1:exon
so has part: feature:130298-130340:-1:exon

XP_030318356.1
type: Protein
SIO_000068: ncbiprotein

position:130298:-1
position: 130298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260974:-1
position: 260974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260680-260974:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:225945-226010:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:199222-199358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:177689-177840:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:176509-176575:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:173751-173893:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:172461-172613:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:170637-170826:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:155086-155184:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:144329-144492:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:130298-130340:-1:exon

LOC103536543
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103536543
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein spinster homolog 2 isoform X2
translation: MMCLESDGSSGSSPGCGGRLRAGDEEEEEDGERGCCGRGAEGEVQTLSGRMNPPAAGKHPERPTARHKAPNLGRARVAAAGILSVGNVLNYLDRYTVAGVLLDIQQHFGVKDSGAGLLQTVFICSFMVAAPIFGYLGDRFNRKIILSCGIFFWSGVTFSSSFITEKYFWLLVLSRGLVGIGEASYSTIAPTIIGDLFTKNTRTLMLSVFYFAIPLGSGLGYITGSSVKQVAGDWHWALRVSPLLGMITGTLILIFVPAAKRGNVEQLGGQLKARTSWLRDMKALIRNRSYVFSSLATSAVSFATGALGMWIPLYLHRAQVVQKTAETCSSQPCGTKDSLIFGAITCFTGFLGVITGAGATKWCRLKTQRADPLVCAVGMLGSAIFICLIFVAAKSSIVGAYICIFIGETLLFSNWAITADILMYVVIPTRRATAVALQSFTSHLLGDAGSPYLIGFISDLIRQSTKESPVWEFLSLGYALMLCPFVVVLGGMFFLATALFFLSDRAKAEQQVNQLVMPPASVKV
SIO_010081: LOC103536543
subclass of: SO_0000673
so part of: LOC103536543
location: complement(join(130298..130340,144329..144492,155086..155184,162455..162520,170637..170826,172461..172613,173751..173893,176509..176575,177689..177840,199222..199358,225945..226010,260680..260974))
location: region:130298-260974:-1
so has part: feature:260680-260974:-1:exon
so has part: feature:225945-226010:-1:exon
so has part: feature:199222-199358:-1:exon
so has part: feature:177689-177840:-1:exon
so has part: feature:176509-176575:-1:exon
so has part: feature:173751-173893:-1:exon
so has part: feature:172461-172613:-1:exon
so has part: feature:170637-170826:-1:exon
so has part: feature:162455-162520:-1:exon
so has part: feature:155086-155184:-1:exon
so has part: feature:144329-144492:-1:exon
so has part: feature:130298-130340:-1:exon

XP_030318354.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:260680-260974:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:225945-226010:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:199222-199358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:177689-177840:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:176509-176575:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:173751-173893:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:172461-172613:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:170637-170826:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:162455-162520:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:155086-155184:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:144329-144492:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:130298-130340:-1:exon

LOC103536543
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103536543
product: protein spinster homolog 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030462495.1
SIO_010081: LOC103536543
subclass of: SO_0000673
so part of: LOC103536543
location: complement(join(143658..143737,144329..144492,155086..155184,170637..170826,172461..172613,173751..173893,176509..176575,177689..177840,199222..199358,225945..226010,260680..261055))
location: region:143658-261055:-1
so has part: feature:260680-261055:-1:exon
so has part: feature:225945-226010:-1:exon
so has part: feature:199222-199358:-1:exon
so has part: feature:177689-177840:-1:exon
so has part: feature:176509-176575:-1:exon
so has part: feature:173751-173893:-1:exon
so has part: feature:172461-172613:-1:exon
so has part: feature:170637-170826:-1:exon
so has part: feature:155086-155184:-1:exon
so has part: feature:144329-144492:-1:exon
so has part: feature:143658-143737:-1:exon

position:143658:-1
position: 143658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261055:-1
position: 261055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260680-261055:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:225945-226010:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:199222-199358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:177689-177840:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:176509-176575:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:173751-173893:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:172461-172613:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:170637-170826:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:155086-155184:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:144329-144492:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:143658-143737:-1:exon

position:143737:-1
position: 143737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103536543
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103536543
product: protein spinster homolog 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030462493.1
SIO_010081: LOC103536543
subclass of: SO_0000673
so part of: LOC103536543
location: complement(join(143658..143737,144329..144492,155086..155184,162455..162520,170637..170826,172461..172613,173751..173893,176509..176575,177689..177840,199222..199358,225945..226010,260680..261055))
location: region:143658-261055:-1
so has part: feature:260680-261055:-1:exon
so has part: feature:225945-226010:-1:exon
so has part: feature:199222-199358:-1:exon
so has part: feature:177689-177840:-1:exon
so has part: feature:176509-176575:-1:exon
so has part: feature:173751-173893:-1:exon
so has part: feature:172461-172613:-1:exon
so has part: feature:170637-170826:-1:exon
so has part: feature:162455-162520:-1:exon
so has part: feature:155086-155184:-1:exon
so has part: feature:144329-144492:-1:exon
so has part: feature:143658-143737:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:260680-261055:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:225945-226010:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:199222-199358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:177689-177840:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:176509-176575:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:173751-173893:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:172461-172613:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:170637-170826:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:162455-162520:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:155086-155184:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:144329-144492:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:143658-143737:-1:exon

LOC103536543
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103536543
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein spinster homolog 2 isoform X3
translation: MMCLESDGSSGSSPGCGGRLRAGDEEEEEDGERGCCGRGAEGEVQTLSGRMNPPAAGKHPERPTARHKAPNLGRARVAAAGILSVGNVLNYLDRYTVAGVLLDIQQHFGVKDSGAGLLQTVFICSFMVAAPIFGYLGDRFNRKIILSCGIFFWSGVTFSSSFITEKYFWLLVLSRGLVGIGEASYSTIAPTIIGDLFTKNTRTLMLSVFYFAIPLGSGLGYITGSSVKQVAGDWHWALRVSPLLGMITGTLILIFVPAAKRGNVEQLGGQLKARTSWLRDMKALIRNRSYVFSSLATSAVSFATGALGMWIPLYLHRAQVVQKTAETCSSQPCGTKDSLIFGAITCFTGFLGVITGAGATKWCRLKTQRADPLVCAVGMLGSAIFICLIFVAAKSSIVGAYYVVIPTRRATAVALQSFTSHLLGDAGSPYLIGFISDLIRQSTKESPVWEFLSLGYALMLCPFVVVLGGMFFLATALFFLSDRAKAEQHKETDSDHLTVGNYSNSEDAST
SIO_010081: LOC103536543
subclass of: SO_0000673
so part of: LOC103536543
location: complement(join(143671..143737,144329..144492,155086..155184,170637..170826,172461..172613,173751..173893,176509..176575,177689..177840,199222..199358,225945..226010,260680..260974))
location: region:143671-260974:-1
so has part: feature:260680-260974:-1:exon
so has part: feature:225945-226010:-1:exon
so has part: feature:199222-199358:-1:exon
so has part: feature:177689-177840:-1:exon
so has part: feature:176509-176575:-1:exon
so has part: feature:173751-173893:-1:exon
so has part: feature:172461-172613:-1:exon
so has part: feature:170637-170826:-1:exon
so has part: feature:155086-155184:-1:exon
so has part: feature:144329-144492:-1:exon
so has part: feature:143671-143737:-1:exon

XP_030318355.1
type: Protein
SIO_000068: ncbiprotein

position:143671:-1
position: 143671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260680-260974:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:225945-226010:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:199222-199358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:177689-177840:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:176509-176575:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:173751-173893:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:172461-172613:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:170637-170826:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:155086-155184:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:144329-144492:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:143671-143737:-1:exon

LOC103536543
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103536543
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein spinster homolog 2 isoform X1
translation: MMCLESDGSSGSSPGCGGRLRAGDEEEEEDGERGCCGRGAEGEVQTLSGRMNPPAAGKHPERPTARHKAPNLGRARVAAAGILSVGNVLNYLDRYTVAGVLLDIQQHFGVKDSGAGLLQTVFICSFMVAAPIFGYLGDRFNRKIILSCGIFFWSGVTFSSSFITEKYFWLLVLSRGLVGIGEASYSTIAPTIIGDLFTKNTRTLMLSVFYFAIPLGSGLGYITGSSVKQVAGDWHWALRVSPLLGMITGTLILIFVPAAKRGNVEQLGGQLKARTSWLRDMKALIRNRSYVFSSLATSAVSFATGALGMWIPLYLHRAQVVQKTAETCSSQPCGTKDSLIFGAITCFTGFLGVITGAGATKWCRLKTQRADPLVCAVGMLGSAIFICLIFVAAKSSIVGAYICIFIGETLLFSNWAITADILMYVVIPTRRATAVALQSFTSHLLGDAGSPYLIGFISDLIRQSTKESPVWEFLSLGYALMLCPFVVVLGGMFFLATALFFLSDRAKAEQHKETDSDHLTVGNYSNSEDAST
SIO_010081: LOC103536543
subclass of: SO_0000673
so part of: LOC103536543
location: complement(join(143671..143737,144329..144492,155086..155184,162455..162520,170637..170826,172461..172613,173751..173893,176509..176575,177689..177840,199222..199358,225945..226010,260680..260974))
location: region:143671-260974:-1
so has part: feature:260680-260974:-1:exon
so has part: feature:225945-226010:-1:exon
so has part: feature:199222-199358:-1:exon
so has part: feature:177689-177840:-1:exon
so has part: feature:176509-176575:-1:exon
so has part: feature:173751-173893:-1:exon
so has part: feature:172461-172613:-1:exon
so has part: feature:170637-170826:-1:exon
so has part: feature:162455-162520:-1:exon
so has part: feature:155086-155184:-1:exon
so has part: feature:144329-144492:-1:exon
so has part: feature:143671-143737:-1:exon

XP_030318353.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:260680-260974:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:225945-226010:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:199222-199358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:177689-177840:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:176509-176575:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:173751-173893:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:172461-172613:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:170637-170826:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:162455-162520:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:155086-155184:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:144329-144492:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:143671-143737:-1:exon

LOC103536544
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103536544
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(307876..348277)
location: region:307876-348277:-1
so has part: feature:307876-348277:-1:exon
subclass of: SO_0000010

103536544
type: Gene
SIO_000068: ncbigene

position:307876:-1
position: 307876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348277:-1
position: 348277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307876-348277:-1:exon

LOC103536544
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103536544
product: protein spinster homolog 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_008502714.2
SIO_010081: LOC103536544
subclass of: SO_0000673
so part of: LOC103536544
location: complement(join(307876..308982,309473..309641,312262..312360,316963..317028,321834..322023,325034..325186,327074..327264,328137..328203,329088..329239,329746..329882,330391..330456,333184..333315))
location: region:307876-333315:-1
so has part: feature:333184-333315:-1:exon
so has part: feature:330391-330456:-1:exon
so has part: feature:329746-329882:-1:exon
so has part: feature:329088-329239:-1:exon
so has part: feature:328137-328203:-1:exon
so has part: feature:327074-327264:-1:exon
so has part: feature:325034-325186:-1:exon
so has part: feature:321834-322023:-1:exon
so has part: feature:316963-317028:-1:exon
so has part: feature:312262-312360:-1:exon
so has part: feature:309473-309641:-1:exon
so has part: feature:307876-308982:-1:exon

position:333315:-1
position: 333315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333184-333315:-1:exon

position:333184:-1
position: 333184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:330391-330456:-1:exon

position:330391:-1
position: 330391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330456:-1
position: 330456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:329746-329882:-1:exon

position:329746:-1
position: 329746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329882:-1
position: 329882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:329088-329239:-1:exon

position:329088:-1
position: 329088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329239:-1
position: 329239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:328137-328203:-1:exon

position:328137:-1
position: 328137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328203:-1
position: 328203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:327074-327264:-1:exon

position:327074:-1
position: 327074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327264:-1
position: 327264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:325034-325186:-1:exon

position:325034:-1
position: 325034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325186:-1
position: 325186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:321834-322023:-1:exon

position:321834:-1
position: 321834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322023:-1
position: 322023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:316963-317028:-1:exon

position:316963:-1
position: 316963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317028:-1
position: 317028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:312262-312360:-1:exon

position:312262:-1
position: 312262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312360:-1
position: 312360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:309473-309641:-1:exon

position:309473:-1
position: 309473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309641:-1
position: 309641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:307876-308982:-1:exon

position:308982:-1
position: 308982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103536544
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103536544
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein spinster homolog 3 isoform X3
translation: MKRDYATAAVLCYVNLINFMDWFIVPGILLDIQGYFKLSDGDTGLLQTVFILCYMLAAPIFGYLGDRYNRKIILGAGVFFWSAVTLGSSFISEWYYWIFFLSRGLVGIGTASYSTIAPTIIADLFEEGKRTTMLSIFYIFIPVGSGLGYVLAAGMADVTDDWHWAFRITPCMGGLALVLLILLVPHRTQRRTAAHRALSISGTIRVKAEKPGVQRTAKTTWCQDVASLAKNWSFVWSSLGLTAMAFVTGALGTWVPLFLYRAEVAQGTEPPCLQESCNSSNSLIFGGITIGTGILGVTAGAEAARRLRKINSKADPLICATSMFISALCLYVALVMAQTNIISTFIFVAFGELFLSVNWAVVTDILLYVVTPRRQSTALALQILVSHLLGDAGSPYLIGTISNAIQANKVPSAQWSFWSMQYSFILCAFVGVLGGGFFLLTSFYIEEDRKEAEQL
SIO_010081: LOC103536544
subclass of: SO_0000673
so part of: LOC103536544
location: complement(join(309474..309641,312262..312360,316963..317028,321834..322023,325034..325186,327074..327264,328137..328203,329088..329239,329746..329882,330391..330456,333184..333262))
location: region:309474-333262:-1
so has part: feature:333184-333262:-1:exon
so has part: feature:330391-330456:-1:exon
so has part: feature:329746-329882:-1:exon
so has part: feature:329088-329239:-1:exon
so has part: feature:328137-328203:-1:exon
so has part: feature:327074-327264:-1:exon
so has part: feature:325034-325186:-1:exon
so has part: feature:321834-322023:-1:exon
so has part: feature:316963-317028:-1:exon
so has part: feature:312262-312360:-1:exon
so has part: feature:309474-309641:-1:exon

XP_008500936.2
type: Protein
SIO_000068: ncbiprotein

position:309474:-1
position: 309474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333262:-1
position: 333262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333184-333262:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:330391-330456:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:329746-329882:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:329088-329239:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:328137-328203:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:327074-327264:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:325034-325186:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:321834-322023:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:316963-317028:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:312262-312360:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:309474-309641:-1:exon

LOC103536544
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103536544
product: protein spinster homolog 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030462167.1
SIO_010081: LOC103536544
subclass of: SO_0000673
so part of: LOC103536544
location: complement(join(310892..311444,312262..312360,316963..317028,321834..322023,325034..325186,327074..327264,328137..328203,329088..329239,329746..329882,330391..330456,348199..348277))
location: region:310892-348277:-1
so has part: feature:348199-348277:-1:exon
so has part: feature:330391-330456:-1:exon
so has part: feature:329746-329882:-1:exon
so has part: feature:329088-329239:-1:exon
so has part: feature:328137-328203:-1:exon
so has part: feature:327074-327264:-1:exon
so has part: feature:325034-325186:-1:exon
so has part: feature:321834-322023:-1:exon
so has part: feature:316963-317028:-1:exon
so has part: feature:312262-312360:-1:exon
so has part: feature:310892-311444:-1:exon

position:310892:-1
position: 310892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348199-348277:-1:exon

position:348199:-1
position: 348199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:330391-330456:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:329746-329882:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:329088-329239:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:328137-328203:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:327074-327264:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:325034-325186:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:321834-322023:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:316963-317028:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:312262-312360:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:310892-311444:-1:exon

position:311444:-1
position: 311444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103536544
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103536544
product: protein spinster homolog 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030462168.1
SIO_010081: LOC103536544
subclass of: SO_0000673
so part of: LOC103536544
location: complement(join(310892..311444,312262..312360,316963..317028,321834..322023,325034..325186,327074..327264,328137..328203,329088..329239,329746..329882,330391..330456,346288..346383))
location: region:310892-346383:-1
so has part: feature:346288-346383:-1:exon
so has part: feature:330391-330456:-1:exon
so has part: feature:329746-329882:-1:exon
so has part: feature:329088-329239:-1:exon
so has part: feature:328137-328203:-1:exon
so has part: feature:327074-327264:-1:exon
so has part: feature:325034-325186:-1:exon
so has part: feature:321834-322023:-1:exon
so has part: feature:316963-317028:-1:exon
so has part: feature:312262-312360:-1:exon
so has part: feature:310892-311444:-1:exon

position:346383:-1
position: 346383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346288-346383:-1:exon

position:346288:-1
position: 346288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:330391-330456:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:329746-329882:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:329088-329239:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:328137-328203:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:327074-327264:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:325034-325186:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:321834-322023:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:316963-317028:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:312262-312360:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:310892-311444:-1:exon

LOC103536544
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103536544
product: protein spinster homolog 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030462166.1
SIO_010081: LOC103536544
subclass of: SO_0000673
so part of: LOC103536544
location: complement(join(310892..311444,312262..312360,316963..317028,321834..322023,325034..325186,327074..327264,328137..328203,329088..329239,329746..329882,330391..330456,333184..333291))
location: region:310892-333291:-1
so has part: feature:333184-333291:-1:exon
so has part: feature:330391-330456:-1:exon
so has part: feature:329746-329882:-1:exon
so has part: feature:329088-329239:-1:exon
so has part: feature:328137-328203:-1:exon
so has part: feature:327074-327264:-1:exon
so has part: feature:325034-325186:-1:exon
so has part: feature:321834-322023:-1:exon
so has part: feature:316963-317028:-1:exon
so has part: feature:312262-312360:-1:exon
so has part: feature:310892-311444:-1:exon

position:333291:-1
position: 333291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333184-333291:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:330391-330456:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:329746-329882:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:329088-329239:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:328137-328203:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:327074-327264:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:325034-325186:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:321834-322023:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:316963-317028:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:312262-312360:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:310892-311444:-1:exon

LOC103536544
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103536544
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein spinster homolog 3 isoform X1
translation: MKRDYATAAVLCYVNLINFMDWFIVPGILLDIQGYFKLSDGDTGLLQTVFILCYMLAAPIFGYLGDRYNRKIILGAGVFFWSAVTLGSSFISEWYYWIFFLSRGLVGIGTASYSTIAPTIIADLFEEGKRTTMLSIFYIFIPVGSGLGYVLAAGMADVTDDWHWAFRITPCMGGLALVLLILLVPHRTQRRTAAHRALSISGTIRVKAEKPGVQRTAKTTWCQDVASLAKNWSFVWSSLGLTAMAFVTGALGTWVPLFLYRAEVAQGTEPPCLQESCNSSNSLIFGGITIGTGILGVTAGAEAARRLRKINSKADPLICATSMFISALCLYVALVMAQTNIISTFIFVAFGELFLSVNWAVVTDILLYVVTPRRQSTALALQILVSHLLGDAGSPYLIGTTGLDRARNAPVSHPPSLLLDQPDREPPGPQLDGNWRQLSKLSGCHLPLGDSSCSLGLAKEEPTLLRGVCEETTALAGICWGNIITEILVP
SIO_010081: LOC103536544
subclass of: SO_0000673
so part of: LOC103536544
location: complement(join(311172..311444,312262..312360,316963..317028,321834..322023,325034..325186,327074..327264,328137..328203,329088..329239,329746..329882,330391..330456,333184..333262))
location: region:311172-333262:-1
so has part: feature:333184-333262:-1:exon
so has part: feature:330391-330456:-1:exon
so has part: feature:329746-329882:-1:exon
so has part: feature:329088-329239:-1:exon
so has part: feature:328137-328203:-1:exon
so has part: feature:327074-327264:-1:exon
so has part: feature:325034-325186:-1:exon
so has part: feature:321834-322023:-1:exon
so has part: feature:316963-317028:-1:exon
so has part: feature:312262-312360:-1:exon
so has part: feature:311172-311444:-1:exon

XP_030318026.1
type: Protein
SIO_000068: ncbiprotein

position:311172:-1
position: 311172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333184-333262:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:330391-330456:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:329746-329882:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:329088-329239:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:328137-328203:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:327074-327264:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:325034-325186:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:321834-322023:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:316963-317028:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:312262-312360:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:311172-311444:-1:exon

LOC103536544
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103536544
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein spinster homolog 3 isoform X2
translation: MLAAPIFGYLGDRYNRKIILGAGVFFWSAVTLGSSFISEWYYWIFFLSRGLVGIGTASYSTIAPTIIADLFEEGKRTTMLSIFYIFIPVGSGLGYVLAAGMADVTDDWHWAFRITPCMGGLALVLLILLVPHRTQRRTAAHRALSISGTIRVKAEKPGVQRTAKTTWCQDVASLAKNWSFVWSSLGLTAMAFVTGALGTWVPLFLYRAEVAQGTEPPCLQESCNSSNSLIFGGITIGTGILGVTAGAEAARRLRKINSKADPLICATSMFISALCLYVALVMAQTNIISTFIFVAFGELFLSVNWAVVTDILLYVVTPRRQSTALALQILVSHLLGDAGSPYLIGTTGLDRARNAPVSHPPSLLLDQPDREPPGPQLDGNWRQLSKLSGCHLPLGDSSCSLGLAKEEPTLLRGVCEETTALAGICWGNIITEILVP
SIO_010081: LOC103536544
subclass of: SO_0000673
so part of: LOC103536544
location: complement(join(311172..311444,312262..312360,316963..317028,321834..322023,325034..325186,327074..327264,328137..328203,329088..329239,329746..329865))
location: region:311172-329865:-1
so has part: feature:329746-329865:-1:exon
so has part: feature:329088-329239:-1:exon
so has part: feature:328137-328203:-1:exon
so has part: feature:327074-327264:-1:exon
so has part: feature:325034-325186:-1:exon
so has part: feature:321834-322023:-1:exon
so has part: feature:316963-317028:-1:exon
so has part: feature:312262-312360:-1:exon
so has part: feature:311172-311444:-1:exon

XP_030318027.1
type: Protein
SIO_000068: ncbiprotein

position:329865:-1
position: 329865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329746-329865:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:329088-329239:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:328137-328203:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:327074-327264:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:325034-325186:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:321834-322023:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:316963-317028:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:312262-312360:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:311172-311444:-1:exon

LOC103536544
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103536544
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein spinster homolog 3 isoform X2
translation: MLAAPIFGYLGDRYNRKIILGAGVFFWSAVTLGSSFISEWYYWIFFLSRGLVGIGTASYSTIAPTIIADLFEEGKRTTMLSIFYIFIPVGSGLGYVLAAGMADVTDDWHWAFRITPCMGGLALVLLILLVPHRTQRRTAAHRALSISGTIRVKAEKPGVQRTAKTTWCQDVASLAKNWSFVWSSLGLTAMAFVTGALGTWVPLFLYRAEVAQGTEPPCLQESCNSSNSLIFGGITIGTGILGVTAGAEAARRLRKINSKADPLICATSMFISALCLYVALVMAQTNIISTFIFVAFGELFLSVNWAVVTDILLYVVTPRRQSTALALQILVSHLLGDAGSPYLIGTTGLDRARNAPVSHPPSLLLDQPDREPPGPQLDGNWRQLSKLSGCHLPLGDSSCSLGLAKEEPTLLRGVCEETTALAGICWGNIITEILVP
SIO_010081: LOC103536544
subclass of: SO_0000673
so part of: LOC103536544
location: complement(join(311172..311444,312262..312360,316963..317028,321834..322023,325034..325186,327074..327264,328137..328203,329088..329239,329746..329865))
location: region:311172-329865:-1
so has part: feature:329746-329865:-1:exon
so has part: feature:329088-329239:-1:exon
so has part: feature:328137-328203:-1:exon
so has part: feature:327074-327264:-1:exon
so has part: feature:325034-325186:-1:exon
so has part: feature:321834-322023:-1:exon
so has part: feature:316963-317028:-1:exon
so has part: feature:312262-312360:-1:exon
so has part: feature:311172-311444:-1:exon

XP_030318028.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:329746-329865:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:329088-329239:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:328137-328203:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:327074-327264:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:325034-325186:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:321834-322023:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:316963-317028:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:312262-312360:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:311172-311444:-1:exon

UBE2G1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: UBE2G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 346606..372501
location: region:346606-372501:1
so has part: feature:346606-372501:1:exon
subclass of: SO_0000010

103535828
type: Gene
SIO_000068: ncbigene

position:346606:1
position: 346606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372501:1
position: 372501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346606-372501:1:exon

UBE2G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: UBE2G1
product: ubiquitin conjugating enzyme E2 G1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 ESTs, 1 long SRA read, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030462169.1
SIO_010081: UBE2G1
subclass of: SO_0000673
so part of: UBE2G1
location: join(346606..346863,361446..361548,364158..364255,365295..365473,369045..369168,371280..372501)
location: region:346606-372501:1
so has part: feature:346606-346863:1:exon
so has part: feature:361446-361548:1:exon
so has part: feature:364158-364255:1:exon
so has part: feature:365295-365473:1:exon
so has part: feature:369045-369168:1:exon
so has part: feature:371280-372501:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:346606-346863:1:exon

position:346863:1
position: 346863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:361446-361548:1:exon

position:361446:1
position: 361446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361548:1
position: 361548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:364158-364255:1:exon

position:364158:1
position: 364158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364255:1
position: 364255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:365295-365473:1:exon

position:365295:1
position: 365295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365473:1
position: 365473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:369045-369168:1:exon

position:369045:1
position: 369045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369168:1
position: 369168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:371280-372501:1:exon

position:371280:1
position: 371280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBE2G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: UBE2G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 G1 isoform X1
translation: MTELQSALLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKSQETAFE
SIO_010081: UBE2G1
subclass of: SO_0000673
so part of: UBE2G1
location: join(346818..346863,361446..361548,364158..364255,365295..365473,369045..369131)
location: region:346818-369131:1
so has part: feature:346818-346863:1:exon
so has part: feature:361446-361548:1:exon
so has part: feature:364158-364255:1:exon
so has part: feature:365295-365473:1:exon
so has part: feature:369045-369131:1:exon

XP_030318029.1
type: Protein
SIO_000068: ncbiprotein

position:346818:1
position: 346818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369131:1
position: 369131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346818-346863:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361446-361548:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:364158-364255:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:365295-365473:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:369045-369131:1:exon

UBE2G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: UBE2G1
product: ubiquitin conjugating enzyme E2 G1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030462170.1
SIO_010081: UBE2G1
subclass of: SO_0000673
so part of: UBE2G1
location: join(361448..361548,364163..364255,365295..365473,369045..369168,371280..372501)
location: region:361448-372501:1
so has part: feature:361448-361548:1:exon
so has part: feature:364163-364255:1:exon
so has part: feature:365295-365473:1:exon
so has part: feature:369045-369168:1:exon
so has part: feature:371280-372501:1:exon

position:361448:1
position: 361448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361448-361548:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:364163-364255:1:exon

position:364163:1
position: 364163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:365295-365473:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:369045-369168:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:371280-372501:1:exon

UBE2G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: UBE2G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 G1 isoform X2
translation: MTMIFIDGKSLLLVLQIHYSGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKSQETAFE
SIO_010081: UBE2G1
subclass of: SO_0000673
so part of: UBE2G1
location: join(361491..361548,364163..364255,365295..365473,369045..369131)
location: region:361491-369131:1
so has part: feature:361491-361548:1:exon
so has part: feature:364163-364255:1:exon
so has part: feature:365295-365473:1:exon
so has part: feature:369045-369131:1:exon

XP_030318030.1
type: Protein
SIO_000068: ncbiprotein

position:361491:1
position: 361491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361491-361548:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:364163-364255:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:365295-365473:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:369045-369131:1:exon

ANKFY1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ANKFY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 376792..409512
location: region:376792-409512:1
so has part: feature:376792-409512:1:exon
subclass of: SO_0000010

103535829
type: Gene
SIO_000068: ncbigene

position:376792:1
position: 376792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409512:1
position: 409512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376792-409512:1:exon

ANKFY1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ANKFY1
product: ankyrin repeat and FYVE domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 9 ESTs, 3 long SRA reads, 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_008501933.2
SIO_010081: ANKFY1
subclass of: SO_0000673
so part of: ANKFY1
location: join(376792..376843,381359..381551,383119..383237,385510..385645,387125..387248,388421..388570,389474..389639,391739..391943,392616..392684,393423..393622,394052..394149,394550..394772,396037..396135,396664..396817,397720..397888,399031..399149,399546..399702,400895..401095,402106..402282,402615..402762,403027..403117,403439..403563,403767..403913,404340..404430,405127..409512)
location: region:376792-409512:1
so has part: feature:376792-376843:1:exon
so has part: feature:381359-381551:1:exon
so has part: feature:383119-383237:1:exon
so has part: feature:385510-385645:1:exon
so has part: feature:387125-387248:1:exon
so has part: feature:388421-388570:1:exon
so has part: feature:389474-389639:1:exon
so has part: feature:391739-391943:1:exon
so has part: feature:392616-392684:1:exon
so has part: feature:393423-393622:1:exon
so has part: feature:394052-394149:1:exon
so has part: feature:394550-394772:1:exon
so has part: feature:396037-396135:1:exon
so has part: feature:396664-396817:1:exon
so has part: feature:397720-397888:1:exon
so has part: feature:399031-399149:1:exon
so has part: feature:399546-399702:1:exon
so has part: feature:400895-401095:1:exon
so has part: feature:402106-402282:1:exon
so has part: feature:402615-402762:1:exon
so has part: feature:403027-403117:1:exon
so has part: feature:403439-403563:1:exon
so has part: feature:403767-403913:1:exon
so has part: feature:404340-404430:1:exon
so has part: feature:405127-409512:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:376792-376843:1:exon

position:376843:1
position: 376843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:381359-381551:1:exon

position:381359:1
position: 381359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381551:1
position: 381551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:383119-383237:1:exon

position:383119:1
position: 383119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383237:1
position: 383237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:385510-385645:1:exon

position:385510:1
position: 385510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385645:1
position: 385645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:387125-387248:1:exon

position:387125:1
position: 387125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387248:1
position: 387248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:388421-388570:1:exon

position:388421:1
position: 388421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388570:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 7
SIO_000628: feature:389474-389639:1:exon

position:389474:1
position: 389474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389639:1
position: 389639
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 8
SIO_000628: feature:391739-391943:1:exon

position:391739:1
position: 391739
reference: sequence
type: ForwardStrandPosition
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position:391943:1
position: 391943
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 9
SIO_000628: feature:392616-392684:1:exon

position:392616:1
position: 392616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392684:1
position: 392684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:393423-393622:1:exon

position:393423:1
position: 393423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393622:1
position: 393622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:394052-394149:1:exon

position:394052:1
position: 394052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394149:1
position: 394149
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 12
SIO_000628: feature:394550-394772:1:exon

position:394550:1
position: 394550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394772:1
position: 394772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:396037-396135:1:exon

position:396037:1
position: 396037
reference: sequence
type: ForwardStrandPosition
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position:396135:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 14
SIO_000628: feature:396664-396817:1:exon

position:396664:1
position: 396664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396817:1
position: 396817
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 15
SIO_000628: feature:397720-397888:1:exon

position:397720:1
position: 397720
reference: sequence
type: ForwardStrandPosition
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position:397888:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 16
SIO_000628: feature:399031-399149:1:exon

position:399031:1
position: 399031
reference: sequence
type: ForwardStrandPosition
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position:399149:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 17
SIO_000628: feature:399546-399702:1:exon

position:399546:1
position: 399546
reference: sequence
type: ForwardStrandPosition
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position:399702:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 18
SIO_000628: feature:400895-401095:1:exon

position:400895:1
position: 400895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401095:1
position: 401095
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 19
SIO_000628: feature:402106-402282:1:exon

position:402106:1
position: 402106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402282:1
position: 402282
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 20
SIO_000628: feature:402615-402762:1:exon

position:402615:1
position: 402615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402762:1
position: 402762
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 21
SIO_000628: feature:403027-403117:1:exon

position:403027:1
position: 403027
reference: sequence
type: ForwardStrandPosition
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position:403117:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 22
SIO_000628: feature:403439-403563:1:exon

position:403439:1
position: 403439
reference: sequence
type: ForwardStrandPosition
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position:403563:1
position: 403563
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 23
SIO_000628: feature:403767-403913:1:exon

position:403767:1
position: 403767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403913:1
position: 403913
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 24
SIO_000628: feature:404340-404430:1:exon

position:404340:1
position: 404340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404430:1
position: 404430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:405127-409512:1:exon

position:405127:1
position: 405127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ANKFY1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ANKFY1
product: ankyrin repeat and FYVE domain containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 9 ESTs, 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030462319.1
SIO_010081: ANKFY1
subclass of: SO_0000673
so part of: ANKFY1
location: join(376819..376843,380479..380558,381359..381551,383119..383237,385510..385645,387125..387248,388421..388570,389474..389639,391739..391943,392616..392684,393423..393622,394052..394149,394550..394772,396037..396135,396664..396817,397720..397888,399031..399149,399546..399702,400895..401095,402106..402282,402615..402762,403027..403117,403439..403563,403767..403913,404340..404430,405127..409512)
location: region:376819-409512:1
so has part: feature:376819-376843:1:exon
so has part: feature:380479-380558:1:exon
so has part: feature:381359-381551:1:exon
so has part: feature:383119-383237:1:exon
so has part: feature:385510-385645:1:exon
so has part: feature:387125-387248:1:exon
so has part: feature:388421-388570:1:exon
so has part: feature:389474-389639:1:exon
so has part: feature:391739-391943:1:exon
so has part: feature:392616-392684:1:exon
so has part: feature:393423-393622:1:exon
so has part: feature:394052-394149:1:exon
so has part: feature:394550-394772:1:exon
so has part: feature:396037-396135:1:exon
so has part: feature:396664-396817:1:exon
so has part: feature:397720-397888:1:exon
so has part: feature:399031-399149:1:exon
so has part: feature:399546-399702:1:exon
so has part: feature:400895-401095:1:exon
so has part: feature:402106-402282:1:exon
so has part: feature:402615-402762:1:exon
so has part: feature:403027-403117:1:exon
so has part: feature:403439-403563:1:exon
so has part: feature:403767-403913:1:exon
so has part: feature:404340-404430:1:exon
so has part: feature:405127-409512:1:exon

position:376819:1
position: 376819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376819-376843:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:380479-380558:1:exon

position:380479:1
position: 380479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380558:1
position: 380558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:381359-381551:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:383119-383237:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:385510-385645:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:387125-387248:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:388421-388570:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:389474-389639:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:391739-391943:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:392616-392684:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:393423-393622:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:394052-394149:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:394550-394772:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:396037-396135:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:396664-396817:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:397720-397888:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:399031-399149:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:399546-399702:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:400895-401095:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:402106-402282:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:402615-402762:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:403027-403117:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:403439-403563:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:403767-403913:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:404340-404430:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:405127-409512:1:exon

ANKFY1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9244
gene: ANKFY1
product: ankyrin repeat and FYVE domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 9 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988343.1
SIO_010081: ANKFY1
so part of: ANKFY1
location: join(376821..376843,381359..381551,383119..383237,385510..385645,387125..387248,388421..388570,389474..389639,391739..391943,392616..392684,393423..393622,394052..394149,394550..394772,396037..396135,396664..396817,397720..397888,399031..399149,399546..399702,400895..401095,402106..402282,402615..402762,403027..403117,403439..403563,403767..403913,404340..404430,405127..405402,407458..409512)
location: region:376821-409512:1
so has part: feature:376821-376843:1:exon
so has part: feature:381359-381551:1:exon
so has part: feature:383119-383237:1:exon
so has part: feature:385510-385645:1:exon
so has part: feature:387125-387248:1:exon
so has part: feature:388421-388570:1:exon
so has part: feature:389474-389639:1:exon
so has part: feature:391739-391943:1:exon
so has part: feature:392616-392684:1:exon
so has part: feature:393423-393622:1:exon
so has part: feature:394052-394149:1:exon
so has part: feature:394550-394772:1:exon
so has part: feature:396037-396135:1:exon
so has part: feature:396664-396817:1:exon
so has part: feature:397720-397888:1:exon
so has part: feature:399031-399149:1:exon
so has part: feature:399546-399702:1:exon
so has part: feature:400895-401095:1:exon
so has part: feature:402106-402282:1:exon
so has part: feature:402615-402762:1:exon
so has part: feature:403027-403117:1:exon
so has part: feature:403439-403563:1:exon
so has part: feature:403767-403913:1:exon
so has part: feature:404340-404430:1:exon
so has part: feature:405127-405402:1:exon
so has part: feature:407458-409512:1:exon

position:376821:1
position: 376821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376821-376843:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:381359-381551:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383119-383237:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:385510-385645:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:387125-387248:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:388421-388570:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389474-389639:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:391739-391943:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:392616-392684:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:393423-393622:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:394052-394149:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:394550-394772:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:396037-396135:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:396664-396817:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:397720-397888:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:399031-399149:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:399546-399702:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:400895-401095:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:402106-402282:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:402615-402762:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:403027-403117:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:403439-403563:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:403767-403913:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:404340-404430:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:405127-405402:1:exon

position:405402:1
position: 405402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:407458-409512:1:exon

position:407458:1
position: 407458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ANKFY1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ANKFY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rabankyrin-5 isoform X1
translation: MAEEEVAKLEKHLMLLRQEYVKLQKKLADTERRCNLLAAQANQDNASDTFISRLLAIVAELYQQEQYSDLKIKVGDKCISAHKFVLAARSDTWSLASLASTEELDLSDADPEVTMAMLRWIYTDELELREDDIFLTELMKLANTFQLQLLRERCEKGVMSLVNVRNCIRFYQTAEELNASTLLNYCAEIIASHWDDLRKEDFSSMSAQLLYKMFKSKTEYPLHKAIKVEREDVVFLYLIEMDSQLPGKLNELDHNGDLALDLALAQRLEGIATTLVNYKADVDRADKRGWSLLHKAIQRGDKFAANFLIKNGARVNAATLGDQETPLHLVASYSPKKHSPDVMAEMAQIAESLLQAGANPNMQDSRGRTPLHVSIVVRNELVFSQLLQCKQLDLELKDHEGSTALWLAVQYITVSSDQSVNPFEDAPVVNGTSFDENSFAARLIQRGSNTDAPDTVTGNCLLQRAAGAGNEAASLFLATHGAKVNHQNRWGETPLHTACRHGLANLTAELLQQGANPNIQTAEAVVGQKDTSSPAAENVYLQTPLHLAIAYNHPDVVSVILEQKANALHATNNLQIIPDFSLKDSRDQTVLGLALWTGMHTIAAQLLGSGASINDTMSDGQTLLHMAIQRQDSKSALFLLEHQADINVRTQDGETALQLAIKNQLPLVVDAICTRGADMSVPDEKGNPPLWLALENNLEDIASTLVRHGCDSTCWGSGPSGCLQSLLHRAIDENSEQIGCFLIRSGCDVNSPRKPGPNGEGEEEAHDGQTPLHLAACWGLEEVIQCLLEFGANVNAQDAEGRTPIHVAISNQHNVIIQLMISHPDIKLNVRDRQGMTPFACAMTYKNNKAAEAILKREPGAAEQVDNKGRNFLHVAVQNSDIESVLFLISVQANVNSRVQDASKLTPLHLAVQAGSEIIVRNLLLAGAQVNELTKHRQTALHLAAQQDLPTICSVLLENGVDFAAVDENGNNALHLAVMHGRLNNIRVLLTECNVDAEAFNIRGQSPMHILGQYGKDNAAAICDLFLECMPEYPLDKPDAEGNTVLLLAYMKGNANLCRAIVRAGARLGVNNNQGVNIFNYQVATKQLLFRLLDMLTKEPPWCDGSNCYECTAKFGVTTRKHHCRHCGRLLCHKCSTKEIPIIKFDLNKPVRVCNICFDVLTLGGVS
SIO_010081: ANKFY1
subclass of: SO_0000673
so part of: ANKFY1
location: join(376834..376843,381359..381551,383119..383237,385510..385645,387125..387248,388421..388570,389474..389639,391739..391943,392616..392684,393423..393622,394052..394149,394550..394772,396037..396135,396664..396817,397720..397888,399031..399149,399546..399702,400895..401095,402106..402282,402615..402762,403027..403117,403439..403563,403767..403913,404340..404430,405127..405259)
location: region:376834-405259:1
so has part: feature:376834-376843:1:exon
so has part: feature:381359-381551:1:exon
so has part: feature:383119-383237:1:exon
so has part: feature:385510-385645:1:exon
so has part: feature:387125-387248:1:exon
so has part: feature:388421-388570:1:exon
so has part: feature:389474-389639:1:exon
so has part: feature:391739-391943:1:exon
so has part: feature:392616-392684:1:exon
so has part: feature:393423-393622:1:exon
so has part: feature:394052-394149:1:exon
so has part: feature:394550-394772:1:exon
so has part: feature:396037-396135:1:exon
so has part: feature:396664-396817:1:exon
so has part: feature:397720-397888:1:exon
so has part: feature:399031-399149:1:exon
so has part: feature:399546-399702:1:exon
so has part: feature:400895-401095:1:exon
so has part: feature:402106-402282:1:exon
so has part: feature:402615-402762:1:exon
so has part: feature:403027-403117:1:exon
so has part: feature:403439-403563:1:exon
so has part: feature:403767-403913:1:exon
so has part: feature:404340-404430:1:exon
so has part: feature:405127-405259:1:exon

XP_008500155.1
type: Protein
SIO_000068: ncbiprotein

position:376834:1
position: 376834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405259:1
position: 405259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376834-376843:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:381359-381551:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383119-383237:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:385510-385645:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:387125-387248:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:388421-388570:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389474-389639:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:391739-391943:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:392616-392684:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:393423-393622:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:394052-394149:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:394550-394772:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:396037-396135:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:396664-396817:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:397720-397888:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:399031-399149:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:399546-399702:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:400895-401095:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:402106-402282:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:402615-402762:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:403027-403117:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:403439-403563:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:403767-403913:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:404340-404430:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:405127-405259:1:exon

ANKFY1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ANKFY1
product: ankyrin repeat and FYVE domain containing 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 9 ESTs, 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030462320.1
SIO_010081: ANKFY1
subclass of: SO_0000673
so part of: ANKFY1
location: join(376931..377006,381359..381551,383119..383237,385510..385645,387125..387248,388421..388570,389474..389639,391739..391943,392616..392684,393423..393622,394052..394149,394550..394772,396037..396135,396664..396817,397720..397888,399031..399149,399546..399702,400895..401095,402106..402282,402615..402762,403027..403117,403439..403563,403767..403913,404340..404430,405127..409512)
location: region:376931-409512:1
so has part: feature:376931-377006:1:exon
so has part: feature:381359-381551:1:exon
so has part: feature:383119-383237:1:exon
so has part: feature:385510-385645:1:exon
so has part: feature:387125-387248:1:exon
so has part: feature:388421-388570:1:exon
so has part: feature:389474-389639:1:exon
so has part: feature:391739-391943:1:exon
so has part: feature:392616-392684:1:exon
so has part: feature:393423-393622:1:exon
so has part: feature:394052-394149:1:exon
so has part: feature:394550-394772:1:exon
so has part: feature:396037-396135:1:exon
so has part: feature:396664-396817:1:exon
so has part: feature:397720-397888:1:exon
so has part: feature:399031-399149:1:exon
so has part: feature:399546-399702:1:exon
so has part: feature:400895-401095:1:exon
so has part: feature:402106-402282:1:exon
so has part: feature:402615-402762:1:exon
so has part: feature:403027-403117:1:exon
so has part: feature:403439-403563:1:exon
so has part: feature:403767-403913:1:exon
so has part: feature:404340-404430:1:exon
so has part: feature:405127-409512:1:exon

position:376931:1
position: 376931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376931-377006:1:exon

position:377006:1
position: 377006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:381359-381551:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383119-383237:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:385510-385645:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:387125-387248:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:388421-388570:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389474-389639:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:391739-391943:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:392616-392684:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:393423-393622:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:394052-394149:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:394550-394772:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:396037-396135:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:396664-396817:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:397720-397888:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:399031-399149:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:399546-399702:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:400895-401095:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:402106-402282:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:402615-402762:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:403027-403117:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:403439-403563:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:403767-403913:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:404340-404430:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:405127-409512:1:exon

ANKFY1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ANKFY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rabankyrin-5 isoform X2
translation: MLLRQEYVKLQKKLADTERRCNLLAAQANQDNASDTFISRLLAIVAELYQQEQYSDLKIKVGDKCISAHKFVLAARSDTWSLASLASTEELDLSDADPEVTMAMLRWIYTDELELREDDIFLTELMKLANTFQLQLLRERCEKGVMSLVNVRNCIRFYQTAEELNASTLLNYCAEIIASHWDDLRKEDFSSMSAQLLYKMFKSKTEYPLHKAIKVEREDVVFLYLIEMDSQLPGKLNELDHNGDLALDLALAQRLEGIATTLVNYKADVDRADKRGWSLLHKAIQRGDKFAANFLIKNGARVNAATLGDQETPLHLVASYSPKKHSPDVMAEMAQIAESLLQAGANPNMQDSRGRTPLHVSIVVRNELVFSQLLQCKQLDLELKDHEGSTALWLAVQYITVSSDQSVNPFEDAPVVNGTSFDENSFAARLIQRGSNTDAPDTVTGNCLLQRAAGAGNEAASLFLATHGAKVNHQNRWGETPLHTACRHGLANLTAELLQQGANPNIQTAEAVVGQKDTSSPAAENVYLQTPLHLAIAYNHPDVVSVILEQKANALHATNNLQIIPDFSLKDSRDQTVLGLALWTGMHTIAAQLLGSGASINDTMSDGQTLLHMAIQRQDSKSALFLLEHQADINVRTQDGETALQLAIKNQLPLVVDAICTRGADMSVPDEKGNPPLWLALENNLEDIASTLVRHGCDSTCWGSGPSGCLQSLLHRAIDENSEQIGCFLIRSGCDVNSPRKPGPNGEGEEEAHDGQTPLHLAACWGLEEVIQCLLEFGANVNAQDAEGRTPIHVAISNQHNVIIQLMISHPDIKLNVRDRQGMTPFACAMTYKNNKAAEAILKREPGAAEQVDNKGRNFLHVAVQNSDIESVLFLISVQANVNSRVQDASKLTPLHLAVQAGSEIIVRNLLLAGAQVNELTKHRQTALHLAAQQDLPTICSVLLENGVDFAAVDENGNNALHLAVMHGRLNNIRVLLTECNVDAEAFNIRGQSPMHILGQYGKDNAAAICDLFLECMPEYPLDKPDAEGNTVLLLAYMKGNANLCRAIVRAGARLGVNNNQGVNIFNYQVATKQLLFRLLDMLTKEPPWCDGSNCYECTAKFGVTTRKHHCRHCGRLLCHKCSTKEIPIIKFDLNKPVRVCNICFDVLTLGGVS
SIO_010081: ANKFY1
subclass of: SO_0000673
so part of: ANKFY1
location: join(381388..381551,383119..383237,385510..385645,387125..387248,388421..388570,389474..389639,391739..391943,392616..392684,393423..393622,394052..394149,394550..394772,396037..396135,396664..396817,397720..397888,399031..399149,399546..399702,400895..401095,402106..402282,402615..402762,403027..403117,403439..403563,403767..403913,404340..404430,405127..405259)
location: region:381388-405259:1
so has part: feature:381388-381551:1:exon
so has part: feature:383119-383237:1:exon
so has part: feature:385510-385645:1:exon
so has part: feature:387125-387248:1:exon
so has part: feature:388421-388570:1:exon
so has part: feature:389474-389639:1:exon
so has part: feature:391739-391943:1:exon
so has part: feature:392616-392684:1:exon
so has part: feature:393423-393622:1:exon
so has part: feature:394052-394149:1:exon
so has part: feature:394550-394772:1:exon
so has part: feature:396037-396135:1:exon
so has part: feature:396664-396817:1:exon
so has part: feature:397720-397888:1:exon
so has part: feature:399031-399149:1:exon
so has part: feature:399546-399702:1:exon
so has part: feature:400895-401095:1:exon
so has part: feature:402106-402282:1:exon
so has part: feature:402615-402762:1:exon
so has part: feature:403027-403117:1:exon
so has part: feature:403439-403563:1:exon
so has part: feature:403767-403913:1:exon
so has part: feature:404340-404430:1:exon
so has part: feature:405127-405259:1:exon

XP_030318179.1
type: Protein
SIO_000068: ncbiprotein

position:381388:1
position: 381388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381388-381551:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:383119-383237:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:385510-385645:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:387125-387248:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:388421-388570:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389474-389639:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:391739-391943:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:392616-392684:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:393423-393622:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:394052-394149:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:394550-394772:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:396037-396135:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:396664-396817:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:397720-397888:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:399031-399149:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:399546-399702:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:400895-401095:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:402106-402282:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:402615-402762:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:403027-403117:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:403439-403563:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:403767-403913:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:404340-404430:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:405127-405259:1:exon

ANKFY1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ANKFY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rabankyrin-5 isoform X2
translation: MLLRQEYVKLQKKLADTERRCNLLAAQANQDNASDTFISRLLAIVAELYQQEQYSDLKIKVGDKCISAHKFVLAARSDTWSLASLASTEELDLSDADPEVTMAMLRWIYTDELELREDDIFLTELMKLANTFQLQLLRERCEKGVMSLVNVRNCIRFYQTAEELNASTLLNYCAEIIASHWDDLRKEDFSSMSAQLLYKMFKSKTEYPLHKAIKVEREDVVFLYLIEMDSQLPGKLNELDHNGDLALDLALAQRLEGIATTLVNYKADVDRADKRGWSLLHKAIQRGDKFAANFLIKNGARVNAATLGDQETPLHLVASYSPKKHSPDVMAEMAQIAESLLQAGANPNMQDSRGRTPLHVSIVVRNELVFSQLLQCKQLDLELKDHEGSTALWLAVQYITVSSDQSVNPFEDAPVVNGTSFDENSFAARLIQRGSNTDAPDTVTGNCLLQRAAGAGNEAASLFLATHGAKVNHQNRWGETPLHTACRHGLANLTAELLQQGANPNIQTAEAVVGQKDTSSPAAENVYLQTPLHLAIAYNHPDVVSVILEQKANALHATNNLQIIPDFSLKDSRDQTVLGLALWTGMHTIAAQLLGSGASINDTMSDGQTLLHMAIQRQDSKSALFLLEHQADINVRTQDGETALQLAIKNQLPLVVDAICTRGADMSVPDEKGNPPLWLALENNLEDIASTLVRHGCDSTCWGSGPSGCLQSLLHRAIDENSEQIGCFLIRSGCDVNSPRKPGPNGEGEEEAHDGQTPLHLAACWGLEEVIQCLLEFGANVNAQDAEGRTPIHVAISNQHNVIIQLMISHPDIKLNVRDRQGMTPFACAMTYKNNKAAEAILKREPGAAEQVDNKGRNFLHVAVQNSDIESVLFLISVQANVNSRVQDASKLTPLHLAVQAGSEIIVRNLLLAGAQVNELTKHRQTALHLAAQQDLPTICSVLLENGVDFAAVDENGNNALHLAVMHGRLNNIRVLLTECNVDAEAFNIRGQSPMHILGQYGKDNAAAICDLFLECMPEYPLDKPDAEGNTVLLLAYMKGNANLCRAIVRAGARLGVNNNQGVNIFNYQVATKQLLFRLLDMLTKEPPWCDGSNCYECTAKFGVTTRKHHCRHCGRLLCHKCSTKEIPIIKFDLNKPVRVCNICFDVLTLGGVS
SIO_010081: ANKFY1
subclass of: SO_0000673
so part of: ANKFY1
location: join(381388..381551,383119..383237,385510..385645,387125..387248,388421..388570,389474..389639,391739..391943,392616..392684,393423..393622,394052..394149,394550..394772,396037..396135,396664..396817,397720..397888,399031..399149,399546..399702,400895..401095,402106..402282,402615..402762,403027..403117,403439..403563,403767..403913,404340..404430,405127..405259)
location: region:381388-405259:1
so has part: feature:381388-381551:1:exon
so has part: feature:383119-383237:1:exon
so has part: feature:385510-385645:1:exon
so has part: feature:387125-387248:1:exon
so has part: feature:388421-388570:1:exon
so has part: feature:389474-389639:1:exon
so has part: feature:391739-391943:1:exon
so has part: feature:392616-392684:1:exon
so has part: feature:393423-393622:1:exon
so has part: feature:394052-394149:1:exon
so has part: feature:394550-394772:1:exon
so has part: feature:396037-396135:1:exon
so has part: feature:396664-396817:1:exon
so has part: feature:397720-397888:1:exon
so has part: feature:399031-399149:1:exon
so has part: feature:399546-399702:1:exon
so has part: feature:400895-401095:1:exon
so has part: feature:402106-402282:1:exon
so has part: feature:402615-402762:1:exon
so has part: feature:403027-403117:1:exon
so has part: feature:403439-403563:1:exon
so has part: feature:403767-403913:1:exon
so has part: feature:404340-404430:1:exon
so has part: feature:405127-405259:1:exon

XP_030318180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:381388-381551:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:383119-383237:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:385510-385645:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:387125-387248:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:388421-388570:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389474-389639:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:391739-391943:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:392616-392684:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:393423-393622:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:394052-394149:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:394550-394772:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:396037-396135:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:396664-396817:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:397720-397888:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:399031-399149:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:399546-399702:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:400895-401095:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:402106-402282:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:402615-402762:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:403027-403117:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:403439-403563:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:403767-403913:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:404340-404430:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:405127-405259:1:exon

LOC103535830
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103535830
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(409609..414935)
location: region:409609-414935:-1
so has part: feature:409609-414935:-1:exon
subclass of: SO_0000010

103535830
type: Gene
SIO_000068: ncbigene

position:409609:-1
position: 409609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414935:-1
position: 414935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409609-414935:-1:exon

LOC103535830
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103535830
product: neuferricin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads, 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030462321.1
SIO_010081: LOC103535830
subclass of: SO_0000673
so part of: LOC103535830
location: complement(join(409609..411885,413269..413455,414094..414234,414538..414935))
location: region:409609-414935:-1
so has part: feature:414538-414935:-1:exon
so has part: feature:414094-414234:-1:exon
so has part: feature:413269-413455:-1:exon
so has part: feature:409609-411885:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:414538-414935:-1:exon

position:414538:-1
position: 414538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:414094-414234:-1:exon

position:414094:-1
position: 414094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414234:-1
position: 414234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:413269-413455:-1:exon

position:413269:-1
position: 413269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413455:-1
position: 413455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:409609-411885:-1:exon

position:411885:-1
position: 411885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103535830
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103535830
product: neuferricin, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030462322.1
SIO_010081: LOC103535830
subclass of: SO_0000673
so part of: LOC103535830
location: complement(join(410287..411078,413269..413455,414094..414234,414538..414804))
location: region:410287-414804:-1
so has part: feature:414538-414804:-1:exon
so has part: feature:414094-414234:-1:exon
so has part: feature:413269-413455:-1:exon
so has part: feature:410287-411078:-1:exon

position:410287:-1
position: 410287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414804:-1
position: 414804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414538-414804:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:414094-414234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413269-413455:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:410287-411078:-1:exon

position:411078:-1
position: 411078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103535830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103535830
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuferricin isoform X2
translation: MWREGGAAVALLCLGAAWLLGRGFESRGRLLSSAELARYRGATGEPGLYLAVLGRVFDVERGRKHYGPGGAYSGLAGRDASRAFATGDFTPSGLVDDVSVLSAGELLAIQSWLSFYRDNYEPVGKLVGRFYDENGAPTAALRQAEAAIEEALKLRAENEQMKQHFPPCNSEWSSAAGTRFWCSRQRYCAKKLLEATYEDHCFTLTSPSCSSDSLLSSSSAQDLVVLHR
SIO_010081: LOC103535830
subclass of: SO_0000673
so part of: LOC103535830
location: complement(join(410949..411078,413269..413455,414094..414234,414538..414766))
location: region:410949-414766:-1
so has part: feature:414538-414766:-1:exon
so has part: feature:414094-414234:-1:exon
so has part: feature:413269-413455:-1:exon
so has part: feature:410949-411078:-1:exon

XP_030318182.1
type: Protein
SIO_000068: ncbiprotein

position:410949:-1
position: 410949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414766:-1
position: 414766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414538-414766:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:414094-414234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413269-413455:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:410949-411078:-1:exon

LOC103535830
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9244
gene: LOC103535830
product: neuferricin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988344.1
SIO_010081: LOC103535830
so part of: LOC103535830
location: complement(join(410987..411447,411514..411885,413269..413455,414094..414234,414538..414804))
location: region:410987-414804:-1
so has part: feature:414538-414804:-1:exon
so has part: feature:414094-414234:-1:exon
so has part: feature:413269-413455:-1:exon
so has part: feature:411514-411885:-1:exon
so has part: feature:410987-411447:-1:exon

position:410987:-1
position: 410987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414538-414804:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:414094-414234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413269-413455:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:411514-411885:-1:exon

position:411514:-1
position: 411514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:410987-411447:-1:exon

position:411447:-1
position: 411447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103535830
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9244
gene: LOC103535830
product: neuferricin, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003988345.1
SIO_010081: LOC103535830
so part of: LOC103535830
location: complement(join(410992..411078,411570..411885,413269..413455,414094..414234,414538..414804))
location: region:410992-414804:-1
so has part: feature:414538-414804:-1:exon
so has part: feature:414094-414234:-1:exon
so has part: feature:413269-413455:-1:exon
so has part: feature:411570-411885:-1:exon
so has part: feature:410992-411078:-1:exon

position:410992:-1
position: 410992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414538-414804:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:414094-414234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413269-413455:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:411570-411885:-1:exon

position:411570:-1
position: 411570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:410992-411078:-1:exon

LOC103535830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103535830
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuferricin isoform X1
translation: MWREGGAAVALLCLGAAWLLGRGFESRGRLLSSAELARYRGATGEPGLYLAVLGRVFDVERGRKHYGPGGAYSGLAGRDASRAFATGDFTPSGLVDDVSVLSAGELLAIQSWLSFYRDNYEPVGKLVGRFYDENGAPTAALRQAEAAIEEALKLRAENEQMKQHFPPCNSEWSSAAGTRFWCSRQSGGINRDWSGVPRKLFQPGSKGSHCVCVRTLGPPWDQAASAEHSNRGDLDNPHLQEYDGCHPMAEQCILTL
SIO_010081: LOC103535830
subclass of: SO_0000673
so part of: LOC103535830
location: complement(join(411672..411885,413269..413455,414094..414234,414538..414766))
location: region:411672-414766:-1
so has part: feature:414538-414766:-1:exon
so has part: feature:414094-414234:-1:exon
so has part: feature:413269-413455:-1:exon
so has part: feature:411672-411885:-1:exon

XP_030318181.1
type: Protein
SIO_000068: ncbiprotein

position:411672:-1
position: 411672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414538-414766:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:414094-414234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413269-413455:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:411672-411885:-1:exon

ZZEF1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ZZEF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 414907..472818
location: region:414907-472818:1
so has part: feature:414907-472818:1:exon
subclass of: SO_0000010

103535831
type: Gene
SIO_000068: ncbigene

position:414907:1
position: 414907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472818:1
position: 472818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414907-472818:1:exon

ZZEF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ZZEF1
product: zinc finger ZZ-type and EF-hand domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030462315.1
SIO_010081: ZZEF1
subclass of: SO_0000673
so part of: ZZEF1
location: join(414907..415514,419991..420135,421714..421908,422822..422993,423629..423828,424857..425067,426530..426646,426889..427067,428064..428162,429235..429326,430298..430446,431277..431388,432434..432649,433535..433635,433960..434129,434876..435009,435306..435376,435829..435943,436556..436715,437675..437796,437883..437993,438591..438757,439363..439444,440082..440283,441749..441897,442257..442497,443451..443530,444298..444391,444881..445397,446032..446196,447178..447297,448124..448285,448931..449060,449353..449491,449707..449872,450396..450658,451437..451612,452141..452288,452772..452911,453346..453623,454639..454813,455309..455441,456279..456475,457078..457197,458298..458486,458889..458989,459521..459656,460733..461092,462805..462948,463746..463914,465522..465620,466354..466519,468099..468249,468726..468797,469638..472818)
location: region:414907-472818:1
so has part: feature:414907-415514:1:exon
so has part: feature:419991-420135:1:exon
so has part: feature:421714-421908:1:exon
so has part: feature:422822-422993:1:exon
so has part: feature:423629-423828:1:exon
so has part: feature:424857-425067:1:exon
so has part: feature:426530-426646:1:exon
so has part: feature:426889-427067:1:exon
so has part: feature:428064-428162:1:exon
so has part: feature:429235-429326:1:exon
so has part: feature:430298-430446:1:exon
so has part: feature:431277-431388:1:exon
so has part: feature:432434-432649:1:exon
so has part: feature:433535-433635:1:exon
so has part: feature:433960-434129:1:exon
so has part: feature:434876-435009:1:exon
so has part: feature:435306-435376:1:exon
so has part: feature:435829-435943:1:exon
so has part: feature:436556-436715:1:exon
so has part: feature:437675-437796:1:exon
so has part: feature:437883-437993:1:exon
so has part: feature:438591-438757:1:exon
so has part: feature:439363-439444:1:exon
so has part: feature:440082-440283:1:exon
so has part: feature:441749-441897:1:exon
so has part: feature:442257-442497:1:exon
so has part: feature:443451-443530:1:exon
so has part: feature:444298-444391:1:exon
so has part: feature:444881-445397:1:exon
so has part: feature:446032-446196:1:exon
so has part: feature:447178-447297:1:exon
so has part: feature:448124-448285:1:exon
so has part: feature:448931-449060:1:exon
so has part: feature:449353-449491:1:exon
so has part: feature:449707-449872:1:exon
so has part: feature:450396-450658:1:exon
so has part: feature:451437-451612:1:exon
so has part: feature:452141-452288:1:exon
so has part: feature:452772-452911:1:exon
so has part: feature:453346-453623:1:exon
so has part: feature:454639-454813:1:exon
so has part: feature:455309-455441:1:exon
so has part: feature:456279-456475:1:exon
so has part: feature:457078-457197:1:exon
so has part: feature:458298-458486:1:exon
so has part: feature:458889-458989:1:exon
so has part: feature:459521-459656:1:exon
so has part: feature:460733-461092:1:exon
so has part: feature:462805-462948:1:exon
so has part: feature:463746-463914:1:exon
so has part: feature:465522-465620:1:exon
so has part: feature:466354-466519:1:exon
so has part: feature:468099-468249:1:exon
so has part: feature:468726-468797:1:exon
so has part: feature:469638-472818:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:414907-415514:1:exon

position:415514:1
position: 415514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:419991-420135:1:exon

position:419991:1
position: 419991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420135:1
position: 420135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:421714-421908:1:exon

position:421714:1
position: 421714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421908:1
position: 421908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:422822-422993:1:exon

position:422822:1
position: 422822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422993:1
position: 422993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:423629-423828:1:exon

position:423629:1
position: 423629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423828:1
position: 423828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:424857-425067:1:exon

position:424857:1
position: 424857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425067:1
position: 425067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:426530-426646:1:exon

position:426530:1
position: 426530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426646:1
position: 426646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:426889-427067:1:exon

position:426889:1
position: 426889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427067:1
position: 427067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:428064-428162:1:exon

position:428064:1
position: 428064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428162:1
position: 428162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:429235-429326:1:exon

position:429235:1
position: 429235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429326:1
position: 429326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:430298-430446:1:exon

position:430298:1
position: 430298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430446:1
position: 430446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:431277-431388:1:exon

position:431277:1
position: 431277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431388:1
position: 431388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:432434-432649:1:exon

position:432434:1
position: 432434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432649:1
position: 432649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:433535-433635:1:exon

position:433535:1
position: 433535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433635:1
position: 433635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:433960-434129:1:exon

position:433960:1
position: 433960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434129:1
position: 434129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:434876-435009:1:exon

position:434876:1
position: 434876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435009:1
position: 435009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:435306-435376:1:exon

position:435306:1
position: 435306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435376:1
position: 435376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:435829-435943:1:exon

position:435829:1
position: 435829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435943:1
position: 435943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:436556-436715:1:exon

position:436556:1
position: 436556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436715:1
position: 436715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:437675-437796:1:exon

position:437675:1
position: 437675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437796:1
position: 437796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:437883-437993:1:exon

position:437883:1
position: 437883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437993:1
position: 437993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:438591-438757:1:exon

position:438591:1
position: 438591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438757:1
position: 438757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:439363-439444:1:exon

position:439363:1
position: 439363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439444:1
position: 439444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:440082-440283:1:exon

position:440082:1
position: 440082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440283:1
position: 440283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:441749-441897:1:exon

position:441749:1
position: 441749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441897:1
position: 441897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:442257-442497:1:exon

position:442257:1
position: 442257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442497:1
position: 442497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:443451-443530:1:exon

position:443451:1
position: 443451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443530:1
position: 443530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:444298-444391:1:exon

position:444298:1
position: 444298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444391:1
position: 444391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:444881-445397:1:exon

position:444881:1
position: 444881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445397:1
position: 445397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:446032-446196:1:exon

position:446032:1
position: 446032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446196:1
position: 446196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:447178-447297:1:exon

position:447178:1
position: 447178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447297:1
position: 447297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:448124-448285:1:exon

position:448124:1
position: 448124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448285:1
position: 448285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:448931-449060:1:exon

position:448931:1
position: 448931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449060:1
position: 449060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:449353-449491:1:exon

position:449353:1
position: 449353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449491:1
position: 449491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:449707-449872:1:exon

position:449707:1
position: 449707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449872:1
position: 449872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:450396-450658:1:exon

position:450396:1
position: 450396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450658:1
position: 450658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:451437-451612:1:exon

position:451437:1
position: 451437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451612:1
position: 451612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:452141-452288:1:exon

position:452141:1
position: 452141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452288:1
position: 452288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:452772-452911:1:exon

position:452772:1
position: 452772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452911:1
position: 452911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:453346-453623:1:exon

position:453346:1
position: 453346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453623:1
position: 453623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:454639-454813:1:exon

position:454639:1
position: 454639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454813:1
position: 454813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:455309-455441:1:exon

position:455309:1
position: 455309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455441:1
position: 455441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:456279-456475:1:exon

position:456279:1
position: 456279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456475:1
position: 456475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:457078-457197:1:exon

position:457078:1
position: 457078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457197:1
position: 457197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:458298-458486:1:exon

position:458298:1
position: 458298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458486:1
position: 458486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:458889-458989:1:exon

position:458889:1
position: 458889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458989:1
position: 458989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:459521-459656:1:exon

position:459521:1
position: 459521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459656:1
position: 459656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:460733-461092:1:exon

position:460733:1
position: 460733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461092:1
position: 461092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:462805-462948:1:exon

position:462805:1
position: 462805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462948:1
position: 462948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:463746-463914:1:exon

position:463746:1
position: 463746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463914:1
position: 463914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:465522-465620:1:exon

position:465522:1
position: 465522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465620:1
position: 465620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:466354-466519:1:exon

position:466354:1
position: 466354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466519:1
position: 466519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 53
SIO_000628: feature:468099-468249:1:exon

position:468099:1
position: 468099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468249:1
position: 468249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 54
SIO_000628: feature:468726-468797:1:exon

position:468726:1
position: 468726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468797:1
position: 468797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 55
SIO_000628: feature:469638-472818:1:exon

position:469638:1
position: 469638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZZEF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ZZEF1
product: zinc finger ZZ-type and EF-hand domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030462316.1
SIO_010081: ZZEF1
subclass of: SO_0000673
so part of: ZZEF1
location: join(414907..415514,419991..420135,421714..421908,422822..422993,423629..423828,424857..425067,426530..426646,426889..427067,428064..428162,429235..429326,430298..430446,431277..431388,432434..432649,433535..433635,433960..434129,434876..435009,435306..435376,435829..435943,436556..436715,437675..437796,437883..437993,438591..438757,439363..439444,440082..440283,441749..441897,442257..442497,443451..443530,444298..444391,444881..445397,446032..446196,447178..447297,448124..448285,448931..449060,449353..449491,449707..449872,450396..450658,451437..451612,452141..452288,452775..452911,453346..453623,454639..454813,455309..455441,456279..456475,457078..457197,458298..458486,458889..458989,459521..459656,460733..461092,462805..462948,463746..463914,465522..465620,466354..466519,468099..468249,468726..468797,469638..472818)
location: region:414907-472818:1
so has part: feature:414907-415514:1:exon
so has part: feature:419991-420135:1:exon
so has part: feature:421714-421908:1:exon
so has part: feature:422822-422993:1:exon
so has part: feature:423629-423828:1:exon
so has part: feature:424857-425067:1:exon
so has part: feature:426530-426646:1:exon
so has part: feature:426889-427067:1:exon
so has part: feature:428064-428162:1:exon
so has part: feature:429235-429326:1:exon
so has part: feature:430298-430446:1:exon
so has part: feature:431277-431388:1:exon
so has part: feature:432434-432649:1:exon
so has part: feature:433535-433635:1:exon
so has part: feature:433960-434129:1:exon
so has part: feature:434876-435009:1:exon
so has part: feature:435306-435376:1:exon
so has part: feature:435829-435943:1:exon
so has part: feature:436556-436715:1:exon
so has part: feature:437675-437796:1:exon
so has part: feature:437883-437993:1:exon
so has part: feature:438591-438757:1:exon
so has part: feature:439363-439444:1:exon
so has part: feature:440082-440283:1:exon
so has part: feature:441749-441897:1:exon
so has part: feature:442257-442497:1:exon
so has part: feature:443451-443530:1:exon
so has part: feature:444298-444391:1:exon
so has part: feature:444881-445397:1:exon
so has part: feature:446032-446196:1:exon
so has part: feature:447178-447297:1:exon
so has part: feature:448124-448285:1:exon
so has part: feature:448931-449060:1:exon
so has part: feature:449353-449491:1:exon
so has part: feature:449707-449872:1:exon
so has part: feature:450396-450658:1:exon
so has part: feature:451437-451612:1:exon
so has part: feature:452141-452288:1:exon
so has part: feature:452775-452911:1:exon
so has part: feature:453346-453623:1:exon
so has part: feature:454639-454813:1:exon
so has part: feature:455309-455441:1:exon
so has part: feature:456279-456475:1:exon
so has part: feature:457078-457197:1:exon
so has part: feature:458298-458486:1:exon
so has part: feature:458889-458989:1:exon
so has part: feature:459521-459656:1:exon
so has part: feature:460733-461092:1:exon
so has part: feature:462805-462948:1:exon
so has part: feature:463746-463914:1:exon
so has part: feature:465522-465620:1:exon
so has part: feature:466354-466519:1:exon
so has part: feature:468099-468249:1:exon
so has part: feature:468726-468797:1:exon
so has part: feature:469638-472818:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:414907-415514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:419991-420135:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:421714-421908:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:422822-422993:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:423629-423828:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:424857-425067:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:426530-426646:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:426889-427067:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:428064-428162:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:429235-429326:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:430298-430446:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:431277-431388:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:432434-432649:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:433535-433635:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:433960-434129:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:434876-435009:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:435306-435376:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:435829-435943:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:436556-436715:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:437675-437796:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:437883-437993:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:438591-438757:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:439363-439444:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:440082-440283:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:441749-441897:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:442257-442497:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:443451-443530:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:444298-444391:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:444881-445397:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:446032-446196:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:447178-447297:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:448124-448285:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:448931-449060:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:449353-449491:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:449707-449872:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:450396-450658:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:451437-451612:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:452141-452288:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:452775-452911:1:exon

position:452775:1
position: 452775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:453346-453623:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:454639-454813:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:455309-455441:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:456279-456475:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:457078-457197:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:458298-458486:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:458889-458989:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:459521-459656:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:460733-461092:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:462805-462948:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:463746-463914:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:465522-465620:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:466354-466519:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:468099-468249:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:468726-468797:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:469638-472818:1:exon

ZZEF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ZZEF1
product: zinc finger ZZ-type and EF-hand domain containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030462318.1
SIO_010081: ZZEF1
subclass of: SO_0000673
so part of: ZZEF1
location: join(414907..415514,419991..420135,421714..421908,422822..422993,423629..423828,424857..425067,426530..426646,426889..427067,428064..428162,429235..429326,430298..430446,431277..431388,432434..432649,433535..433635,433960..434129,434876..435009,435306..435376,435829..435943,436556..436715,437675..437796,437883..437993,438591..438757,439363..439444,440082..440283,441749..441897,442257..442497,443451..443530,444298..444391,444881..445397,446032..446196,447178..447297,448124..448285,448931..449060,449353..449491,449707..449872,450396..450658,451437..451612,452141..452288,452772..452911,453346..453623,454639..454813,455309..455441,456279..456475,457078..457197,458298..458486,458889..458989,459521..459656,460733..461096,462805..462924)
location: region:414907-462924:1
so has part: feature:414907-415514:1:exon
so has part: feature:419991-420135:1:exon
so has part: feature:421714-421908:1:exon
so has part: feature:422822-422993:1:exon
so has part: feature:423629-423828:1:exon
so has part: feature:424857-425067:1:exon
so has part: feature:426530-426646:1:exon
so has part: feature:426889-427067:1:exon
so has part: feature:428064-428162:1:exon
so has part: feature:429235-429326:1:exon
so has part: feature:430298-430446:1:exon
so has part: feature:431277-431388:1:exon
so has part: feature:432434-432649:1:exon
so has part: feature:433535-433635:1:exon
so has part: feature:433960-434129:1:exon
so has part: feature:434876-435009:1:exon
so has part: feature:435306-435376:1:exon
so has part: feature:435829-435943:1:exon
so has part: feature:436556-436715:1:exon
so has part: feature:437675-437796:1:exon
so has part: feature:437883-437993:1:exon
so has part: feature:438591-438757:1:exon
so has part: feature:439363-439444:1:exon
so has part: feature:440082-440283:1:exon
so has part: feature:441749-441897:1:exon
so has part: feature:442257-442497:1:exon
so has part: feature:443451-443530:1:exon
so has part: feature:444298-444391:1:exon
so has part: feature:444881-445397:1:exon
so has part: feature:446032-446196:1:exon
so has part: feature:447178-447297:1:exon
so has part: feature:448124-448285:1:exon
so has part: feature:448931-449060:1:exon
so has part: feature:449353-449491:1:exon
so has part: feature:449707-449872:1:exon
so has part: feature:450396-450658:1:exon
so has part: feature:451437-451612:1:exon
so has part: feature:452141-452288:1:exon
so has part: feature:452772-452911:1:exon
so has part: feature:453346-453623:1:exon
so has part: feature:454639-454813:1:exon
so has part: feature:455309-455441:1:exon
so has part: feature:456279-456475:1:exon
so has part: feature:457078-457197:1:exon
so has part: feature:458298-458486:1:exon
so has part: feature:458889-458989:1:exon
so has part: feature:459521-459656:1:exon
so has part: feature:460733-461096:1:exon
so has part: feature:462805-462924:1:exon

position:462924:1
position: 462924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414907-415514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:419991-420135:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:421714-421908:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:422822-422993:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:423629-423828:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:424857-425067:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:426530-426646:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:426889-427067:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:428064-428162:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:429235-429326:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:430298-430446:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:431277-431388:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:432434-432649:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:433535-433635:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:433960-434129:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:434876-435009:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:435306-435376:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:435829-435943:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:436556-436715:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:437675-437796:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:437883-437993:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:438591-438757:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:439363-439444:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:440082-440283:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:441749-441897:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:442257-442497:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:443451-443530:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:444298-444391:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:444881-445397:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:446032-446196:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:447178-447297:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:448124-448285:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:448931-449060:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:449353-449491:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:449707-449872:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:450396-450658:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:451437-451612:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:452141-452288:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:452772-452911:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:453346-453623:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:454639-454813:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:455309-455441:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:456279-456475:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:457078-457197:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:458298-458486:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:458889-458989:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:459521-459656:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:460733-461096:1:exon

position:461096:1
position: 461096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:462805-462924:1:exon

ZZEF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ZZEF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger ZZ-type and EF-hand domain-containing protein 1 isoform X1
translation: MGTAASHSSEEEEEGAEEGMEGAAAAPQPGSPFPPGGAASPAPPLPPAEVLLEQARLREATARLREAALPESLVSRHHGTLVRWLEERLSRGDEAVSLEQFCEVLESVSRLSAGSRGESEEAFAQFDAEGDGTVDVENMLEALKNCSGANLQGELSHVIRQLQACSLVPGFIDIFSESKERLGVHASMILRFLHRNRISSTAIPYPVLEYFNNICTMRSSVLKDSLDRLLLKEKEYPSDLNGNQELDKLKSVTKCYTHIETSSNSADIDKMTNGETTSFWQSDGSARSHWIRLKMKPDVVLRHLSIAVAASDQSYMPQQVTVAVGRNASSLQEVRDVHIPSNITGYVTLLENANISQMYVQINIKRCLSDGCDTRIHGLKAVGYKRVKKVGVSVCDASAIWYWSLLTSLVTASMETNPAFVHTILQNTQKALQHMPPLSLTPGSTDFSSFLSPNVLEEVDSFLIRITSCCTTPEVELTLLAFALARGSVAKVLSSLCTITDHLDTPYKASSLIASMATVRQNLLYKYGKPLRLTLQACDVKGKEDKSGPENLLVEPWTGDGFLTETGKTRASIILSTGTESSFQVTQIRIKVRRGAIGAQCGLVFAYNSASAKFHAEEHFKRFESYDRWKLREFKQFLKNRSSCSSDDLGDDDPIGWFEVEEEWDEVDVRMQKCRISQYLMIKFLCTRQESAERLGVQGLSVLGYLRPMRDEPSSSMNCLQCRKTDDETVCGTTLLLKTLHFIQQLAQDLVQQKESGLKYKSFLDFTGLDLQLFWNFYNKLHQNPREECIFAQTLLLQLLQSCFSVLTGDNKTAKPQETSQSKTSGHTEAAQELYRHLCEVVDMGDSSFMPMKMLKEEVKNTLLSGAAIFFPDRQTRRHQLFTMMKNITEQEHKQSVHLAFRSLCTHFSDQDPGGLLLLPEKGVSANFGINEVLSVMETLLLVAARECEMMMLDVAQQESGTVLSSLFWSVQGSLLSWCYLQLKGSENSTKDLAVEILKNYVGQFLSNIRTILQSLLSQYSGKTIVEKISNSVFAMATRQLVIFLLDFCTLDIPYCTLLQEFSTLIEPLKSLCSEPHKMEMESWQQEQPVVLRTWTMESPHNYENNCHEVSVFLCHGATYFEVEFDEKCETERRYDYLEFTDARGAKTRYDTKVGTEKWPKKVTFKAGPRLQFLFHSDSSNNEWGYKFSVTAYGLPDVAVSWGLDLQLLVSRLMGRLASRSMALKSLRDLGSEADLPPVKATSVLNSPLWKPVFRHQMCPEALLGAIQSRRLHKDKTEARSSHQDDCRNFLIDFAKSDPAQDFSGQKSELFKGLIQACKKQTPKTDIVAGSTVDQAVNSTFAALVYLTPDLYEKLQKYVNSGGKVPLSDEFAQVYSLADSIRIWMLEMKQKSLMGRGNDTEEKQNTEASEVNPETLAKLCMQKSLLLLNFLPVRAKTKDSASESLDSQDPEDIQHYVSDKSQRKGSVVDTDFQAAHSLSSSEATHPISKEGGQMAQADLKMKQVPDLLQTEETSAFHSKVAENTASQHEEVSSPPSTPTRKSQFSRGRLRLLSFRSMEEPKAVPTVKEKYPLLKNVLDFIKDQSLSHESVLKVLALRKAQGQSIMEVLKTIRRCLDSLGQPHCFHPPCVLFLLELLACQKDFTNYFGNLEGCGAELHKEIRESYYQLVLFLVNSVKGFSTINDRSLLPALSCVQTAVLHLLDMSWEPSDLSFFVEIQLPHLLMSTSQENISIHESVICQWSEEDEIADYKQNCEWMDECQDVMFETWYEKIAQADPEKQRKMHMFVARYCDLLNVDISCDGCDEIAPWHRYRCLQCNDMDLCKTCFLGGVKPEGHEDDHEMVSIEYACDHCQGVIIGRRMNCNVCDDFDLCYGCYSAKKYSDSHLPTHSITVYPMVTIRISDRQRLIQPYVHNYSWLLFAALTLYSADLANGEEVEGEKLDSQVLNHARVLQHQCIQLIGDCLMKAQHGKGLKNLALLGMLPEGESISENDTVPVSPPTD…
SIO_010081: ZZEF1
subclass of: SO_0000673
so part of: ZZEF1
location: join(415152..415514,419991..420135,421714..421908,422822..422993,423629..423828,424857..425067,426530..426646,426889..427067,428064..428162,429235..429326,430298..430446,431277..431388,432434..432649,433535..433635,433960..434129,434876..435009,435306..435376,435829..435943,436556..436715,437675..437796,437883..437993,438591..438757,439363..439444,440082..440283,441749..441897,442257..442497,443451..443530,444298..444391,444881..445397,446032..446196,447178..447297,448124..448285,448931..449060,449353..449491,449707..449872,450396..450658,451437..451612,452141..452288,452772..452911,453346..453623,454639..454813,455309..455441,456279..456475,457078..457197,458298..458486,458889..458989,459521..459656,460733..461092,462805..462948,463746..463914,465522..465620,466354..466519,468099..468249,468726..468797,469638..469712)
location: region:415152-469712:1
so has part: feature:415152-415514:1:exon
so has part: feature:419991-420135:1:exon
so has part: feature:421714-421908:1:exon
so has part: feature:422822-422993:1:exon
so has part: feature:423629-423828:1:exon
so has part: feature:424857-425067:1:exon
so has part: feature:426530-426646:1:exon
so has part: feature:426889-427067:1:exon
so has part: feature:428064-428162:1:exon
so has part: feature:429235-429326:1:exon
so has part: feature:430298-430446:1:exon
so has part: feature:431277-431388:1:exon
so has part: feature:432434-432649:1:exon
so has part: feature:433535-433635:1:exon
so has part: feature:433960-434129:1:exon
so has part: feature:434876-435009:1:exon
so has part: feature:435306-435376:1:exon
so has part: feature:435829-435943:1:exon
so has part: feature:436556-436715:1:exon
so has part: feature:437675-437796:1:exon
so has part: feature:437883-437993:1:exon
so has part: feature:438591-438757:1:exon
so has part: feature:439363-439444:1:exon
so has part: feature:440082-440283:1:exon
so has part: feature:441749-441897:1:exon
so has part: feature:442257-442497:1:exon
so has part: feature:443451-443530:1:exon
so has part: feature:444298-444391:1:exon
so has part: feature:444881-445397:1:exon
so has part: feature:446032-446196:1:exon
so has part: feature:447178-447297:1:exon
so has part: feature:448124-448285:1:exon
so has part: feature:448931-449060:1:exon
so has part: feature:449353-449491:1:exon
so has part: feature:449707-449872:1:exon
so has part: feature:450396-450658:1:exon
so has part: feature:451437-451612:1:exon
so has part: feature:452141-452288:1:exon
so has part: feature:452772-452911:1:exon
so has part: feature:453346-453623:1:exon
so has part: feature:454639-454813:1:exon
so has part: feature:455309-455441:1:exon
so has part: feature:456279-456475:1:exon
so has part: feature:457078-457197:1:exon
so has part: feature:458298-458486:1:exon
so has part: feature:458889-458989:1:exon
so has part: feature:459521-459656:1:exon
so has part: feature:460733-461092:1:exon
so has part: feature:462805-462948:1:exon
so has part: feature:463746-463914:1:exon
so has part: feature:465522-465620:1:exon
so has part: feature:466354-466519:1:exon
so has part: feature:468099-468249:1:exon
so has part: feature:468726-468797:1:exon
so has part: feature:469638-469712:1:exon

XP_030318175.1
type: Protein
SIO_000068: ncbiprotein

position:415152:1
position: 415152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469712:1
position: 469712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415152-415514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:419991-420135:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:421714-421908:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:422822-422993:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:423629-423828:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:424857-425067:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:426530-426646:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:426889-427067:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:428064-428162:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:429235-429326:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:430298-430446:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:431277-431388:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:432434-432649:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:433535-433635:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:433960-434129:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:434876-435009:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:435306-435376:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:435829-435943:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:436556-436715:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:437675-437796:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:437883-437993:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:438591-438757:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:439363-439444:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:440082-440283:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:441749-441897:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:442257-442497:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:443451-443530:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:444298-444391:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:444881-445397:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:446032-446196:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:447178-447297:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:448124-448285:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:448931-449060:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:449353-449491:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:449707-449872:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:450396-450658:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:451437-451612:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:452141-452288:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:452772-452911:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:453346-453623:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:454639-454813:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:455309-455441:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:456279-456475:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:457078-457197:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:458298-458486:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:458889-458989:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:459521-459656:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:460733-461092:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:462805-462948:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:463746-463914:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:465522-465620:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:466354-466519:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:468099-468249:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:468726-468797:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:469638-469712:1:exon

ZZEF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ZZEF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger ZZ-type and EF-hand domain-containing protein 1 isoform X2
translation: MGTAASHSSEEEEEGAEEGMEGAAAAPQPGSPFPPGGAASPAPPLPPAEVLLEQARLREATARLREAALPESLVSRHHGTLVRWLEERLSRGDEAVSLEQFCEVLESVSRLSAGSRGESEEAFAQFDAEGDGTVDVENMLEALKNCSGANLQGELSHVIRQLQACSLVPGFIDIFSESKERLGVHASMILRFLHRNRISSTAIPYPVLEYFNNICTMRSSVLKDSLDRLLLKEKEYPSDLNGNQELDKLKSVTKCYTHIETSSNSADIDKMTNGETTSFWQSDGSARSHWIRLKMKPDVVLRHLSIAVAASDQSYMPQQVTVAVGRNASSLQEVRDVHIPSNITGYVTLLENANISQMYVQINIKRCLSDGCDTRIHGLKAVGYKRVKKVGVSVCDASAIWYWSLLTSLVTASMETNPAFVHTILQNTQKALQHMPPLSLTPGSTDFSSFLSPNVLEEVDSFLIRITSCCTTPEVELTLLAFALARGSVAKVLSSLCTITDHLDTPYKASSLIASMATVRQNLLYKYGKPLRLTLQACDVKGKEDKSGPENLLVEPWTGDGFLTETGKTRASIILSTGTESSFQVTQIRIKVRRGAIGAQCGLVFAYNSASAKFHAEEHFKRFESYDRWKLREFKQFLKNRSSCSSDDLGDDDPIGWFEVEEEWDEVDVRMQKCRISQYLMIKFLCTRQESAERLGVQGLSVLGYLRPMRDEPSSSMNCLQCRKTDDETVCGTTLLLKTLHFIQQLAQDLVQQKESGLKYKSFLDFTGLDLQLFWNFYNKLHQNPREECIFAQTLLLQLLQSCFSVLTGDNKTAKPQETSQSKTSGHTEAAQELYRHLCEVVDMGDSSFMPMKMLKEEVKNTLLSGAAIFFPDRQTRRHQLFTMMKNITEQEHKQSVHLAFRSLCTHFSDQDPGGLLLLPEKGVSANFGINEVLSVMETLLLVAARECEMMMLDVAQQESGTVLSSLFWSVQGSLLSWCYLQLKGSENSTKDLAVEILKNYVGQFLSNIRTILQSLLSQYSGKTIVEKISNSVFAMATRQLVIFLLDFCTLDIPYCTLLQEFSTLIEPLKSLCSEPHKMEMESWQQEQPVVLRTWTMESPHNYENNCHEVSVFLCHGATYFEVEFDEKCETERRYDYLEFTDARGAKTRYDTKVGTEKWPKKVTFKAGPRLQFLFHSDSSNNEWGYKFSVTAYGLPDVAVSWGLDLQLLVSRLMGRLASRSMALKSLRDLGSEADLPPVKATSVLNSPLWKPVFRHQMCPEALLGAIQSRRLHKDKTEARSSHQDDCRNFLIDFAKSDPAQDFSGQKSELFKGLIQACKKQTPKTDIVAGSTVDQAVNSTFAALVYLTPDLYEKLQKYVNSGGKVPLSDEFAQVYSLADSIRIWMLEMKQKSLMGRGNDTEEKQNTEASEVNPETLAKLCMQKSLLLLNFLPVRAKTKDSASESLDSQDPEDIQHYVSDKSQRKGSVVDTDFQAAHSLSSSEATHPISKEGGQMAQADLKMKQVPDLLQTEETSAFHSKVAENTASQHEEVSSPPSTPTRKSQFSRGRLRLLSFRSMEEPKAVPTVKEKYPLLKNVLDFIKDQSLSHESVLKVLALRKAQGQSIMEVLKTIRRCLDSLGQPHCFHPPCVLFLLELLACQKDFTNYFGNLEGCGAELHKEIRESYYQLVLFLVNSVKGFSTINDRSLLPALSCVQTAVLHLLDMSWEPSDLSFFVEIQLPHLLMSTSQENISIHESVICQWSEEDEIADYKQNCEWMDECQDVMFETWYEKIAQADPEKQRKMHMFVARYCDLLNVDISCDGCDEIAPWHRYRCLQCNDMDLCKTCFLGGVKPEGHEDDHEMVSIEYACDHCQGVIIGRRMNCNVCDDFDLCYGCYSAKKYSDSHLPTHSITVYPMVTIRISDRQRLIQPYVHNYSWLLFAALTLYSADLANGEEVEGEKLDSQVLNHARVLQHQCIQLIGDCLMKAQHGKGLKNLALLGMLPEGESISENDTVPVSPPTD…
SIO_010081: ZZEF1
subclass of: SO_0000673
so part of: ZZEF1
location: join(415152..415514,419991..420135,421714..421908,422822..422993,423629..423828,424857..425067,426530..426646,426889..427067,428064..428162,429235..429326,430298..430446,431277..431388,432434..432649,433535..433635,433960..434129,434876..435009,435306..435376,435829..435943,436556..436715,437675..437796,437883..437993,438591..438757,439363..439444,440082..440283,441749..441897,442257..442497,443451..443530,444298..444391,444881..445397,446032..446196,447178..447297,448124..448285,448931..449060,449353..449491,449707..449872,450396..450658,451437..451612,452141..452288,452775..452911,453346..453623,454639..454813,455309..455441,456279..456475,457078..457197,458298..458486,458889..458989,459521..459656,460733..461092,462805..462948,463746..463914,465522..465620,466354..466519,468099..468249,468726..468797,469638..469712)
location: region:415152-469712:1
so has part: feature:415152-415514:1:exon
so has part: feature:419991-420135:1:exon
so has part: feature:421714-421908:1:exon
so has part: feature:422822-422993:1:exon
so has part: feature:423629-423828:1:exon
so has part: feature:424857-425067:1:exon
so has part: feature:426530-426646:1:exon
so has part: feature:426889-427067:1:exon
so has part: feature:428064-428162:1:exon
so has part: feature:429235-429326:1:exon
so has part: feature:430298-430446:1:exon
so has part: feature:431277-431388:1:exon
so has part: feature:432434-432649:1:exon
so has part: feature:433535-433635:1:exon
so has part: feature:433960-434129:1:exon
so has part: feature:434876-435009:1:exon
so has part: feature:435306-435376:1:exon
so has part: feature:435829-435943:1:exon
so has part: feature:436556-436715:1:exon
so has part: feature:437675-437796:1:exon
so has part: feature:437883-437993:1:exon
so has part: feature:438591-438757:1:exon
so has part: feature:439363-439444:1:exon
so has part: feature:440082-440283:1:exon
so has part: feature:441749-441897:1:exon
so has part: feature:442257-442497:1:exon
so has part: feature:443451-443530:1:exon
so has part: feature:444298-444391:1:exon
so has part: feature:444881-445397:1:exon
so has part: feature:446032-446196:1:exon
so has part: feature:447178-447297:1:exon
so has part: feature:448124-448285:1:exon
so has part: feature:448931-449060:1:exon
so has part: feature:449353-449491:1:exon
so has part: feature:449707-449872:1:exon
so has part: feature:450396-450658:1:exon
so has part: feature:451437-451612:1:exon
so has part: feature:452141-452288:1:exon
so has part: feature:452775-452911:1:exon
so has part: feature:453346-453623:1:exon
so has part: feature:454639-454813:1:exon
so has part: feature:455309-455441:1:exon
so has part: feature:456279-456475:1:exon
so has part: feature:457078-457197:1:exon
so has part: feature:458298-458486:1:exon
so has part: feature:458889-458989:1:exon
so has part: feature:459521-459656:1:exon
so has part: feature:460733-461092:1:exon
so has part: feature:462805-462948:1:exon
so has part: feature:463746-463914:1:exon
so has part: feature:465522-465620:1:exon
so has part: feature:466354-466519:1:exon
so has part: feature:468099-468249:1:exon
so has part: feature:468726-468797:1:exon
so has part: feature:469638-469712:1:exon

XP_030318176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:415152-415514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:419991-420135:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:421714-421908:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:422822-422993:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:423629-423828:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:424857-425067:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:426530-426646:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:426889-427067:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:428064-428162:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:429235-429326:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:430298-430446:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:431277-431388:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:432434-432649:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:433535-433635:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:433960-434129:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:434876-435009:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:435306-435376:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:435829-435943:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:436556-436715:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:437675-437796:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:437883-437993:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:438591-438757:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:439363-439444:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:440082-440283:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:441749-441897:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:442257-442497:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:443451-443530:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:444298-444391:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:444881-445397:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:446032-446196:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:447178-447297:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:448124-448285:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:448931-449060:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:449353-449491:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:449707-449872:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:450396-450658:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:451437-451612:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:452141-452288:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:452775-452911:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:453346-453623:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:454639-454813:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:455309-455441:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:456279-456475:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:457078-457197:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:458298-458486:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:458889-458989:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:459521-459656:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:460733-461092:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:462805-462948:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:463746-463914:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:465522-465620:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:466354-466519:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:468099-468249:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:468726-468797:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:469638-469712:1:exon

ZZEF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ZZEF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger ZZ-type and EF-hand domain-containing protein 1 isoform X3
translation: MGTAASHSSEEEEEGAEEGMEGAAAAPQPGSPFPPGGAASPAPPLPPAEVLLEQARLREATARLREAALPESLVSRHHGTLVRWLEERLSRGDEAVSLEQFCEVLESVSRLSAGSRGESEEAFAQFDAEGDGTVDVENMLEALKNCSGANLQGELSHVIRQLQACSLVPGFIDIFSESKERLGVHASMILRFLHRNRISSTAIPYPVLEYFNNICTMRSSVLKDSLDRLLLKEKEYPSDLNGNQELDKLKSVTKCYTHIETSSNSADIDKMTNGETTSFWQSDGSARSHWIRLKMKPDVVLRHLSIAVAASDQSYMPQQVTVAVGRNASSLQEVRDVHIPSNITGYVTLLENANISQMYVQINIKRCLSDGCDTRIHGLKAVGYKRVKKVGVSVCDASAIWYWSLLTSLVTASMETNPAFVHTILQNTQKALQHMPPLSLTPGSTDFSSFLSPNVLEEVDSFLIRITSCCTTPEVELTLLAFALARGSVAKVLSSLCTITDHLDTPYKASSLIASMATVRQNLLYKYGKPLRLTLQACDVKGKEDKSGPENLLVEPWTGDGFLTETGKTRASIILSTGTESSFQVTQIRIKVRRGAIGAQCGLVFAYNSASAKFHAEEHFKRFESYDRWKLREFKQFLKNRSSCSSDDLGDDDPIGWFEVEEEWDEVDVRMQKCRISQYLMIKFLCTRQESAERLGVQGLSVLGYLRPMRDEPSSSMNCLQCRKTDDETVCGTTLLLKTLHFIQQLAQDLVQQKESGLKYKSFLDFTGLDLQLFWNFYNKLHQNPREECIFAQTLLLQLLQSCFSVLTGDNKTAKPQETSQSKTSGHTEAAQELYRHLCEVVDMGDSSFMPMKMLKEEVKNTLLSGAAIFFPDRQTRRHQLFTMMKNITEQEHKQSVHLAFRSLCTHFSDQDPGGLLLLPEKGVSANFGINEVLSVMETLLLVAARECEMMMLDVAQQESGTVLSSLFWSVQGSLLSWCYLQLKGSENSTKDLAVEILKNYVGQFLSNIRTILQSLLSQYSGKTIVEKISNSVFAMATRQLVIFLLDFCTLDIPYCTLLQEFSTLIEPLKSLCSEPHKMEMESWQQEQPVVLRTWTMESPHNYENNCHEVSVFLCHGATYFEVEFDEKCETERRYDYLEFTDARGAKTRYDTKVGTEKWPKKVTFKAGPRLQFLFHSDSSNNEWGYKFSVTAYGLPDVAVSWGLDLQLLVSRLMGRLASRSMALKSLRDLGSEADLPPVKATSVLNSPLWKPVFRHQMCPEALLGAIQSRRLHKDKTEARSSHQDDCRNFLIDFAKSDPAQDFSGQKSELFKGLIQACKKQTPKTDIVAGSTVDQAVNSTFAALVYLTPDLYEKLQKYVNSGGKVPLSDEFAQVYSLADSIRIWMLEMKQKSLMGRGNDTEEKQNTEASEVNPETLAKLCMQKSLLLLNFLPVRAKTKDSASESLDSQDPEDIQHYVSDKSQRKGSVVDTDFQAAHSLSSSEATHPISKEGGQMAQADLKMKQVPDLLQTEETSAFHSKVAENTASQHEEVSSPPSTPTRKSQFSRGRLRLLSFRSMEEPKAVPTVKEKYPLLKNVLDFIKDQSLSHESVLKVLALRKAQGQSIMEVLKTIRRCLDSLGQPHCFHPPCVLFLLELLACQKDFTNYFGNLEGCGAELHKEIRESYYQLVLFLVNSVKGFSTINDRSLLPALSCVQTAVLHLLDMSWEPSDLSFFVEIQLPHLLMSTSQENISIHESVICQWSEEDEIADYKQNCEWMDECQDVMFETWYEKIAQADPEKQRKMHMFVARYCDLLNVDISCDGCDEIAPWHRYRCLQCNDMDLCKTCFLGGVKPEGHEDDHEMVSIEYACDHCQGVIIGRRMNCNVCDDFDLCYGCYSAKKYSDSHLPTHSITVYPMVTIRISDRQRLIQPYVHNYSWLLFAALTLYSADLANGEEVEGEKLDSQVLNHARVLQHQCIQLIGDCLMKAQHGKGLKNLALLGMLPEGESISENDTVPVSPPTD…
SIO_010081: ZZEF1
subclass of: SO_0000673
so part of: ZZEF1
location: join(415152..415514,419991..420135,421714..421908,422822..422993,423629..423828,424857..425067,426530..426646,426889..427067,428064..428162,429235..429326,430298..430446,431277..431388,432434..432649,433535..433635,433960..434129,434876..435009,435306..435376,435829..435943,436556..436715,437675..437796,437883..437993,438591..438757,439363..439444,440082..440283,441749..441897,442257..442497,443451..443530,444298..444391,444881..445397,446032..446196,447178..447297,448124..448285,448931..449060,449353..449491,449707..449872,450396..450658,451437..451612,452141..452288,452772..452911,453346..453623,454639..454813,455309..455441,456279..456475,457078..457197,458298..458486,458889..458989,459521..459656,460733..461096,462805..462833)
location: region:415152-462833:1
so has part: feature:415152-415514:1:exon
so has part: feature:419991-420135:1:exon
so has part: feature:421714-421908:1:exon
so has part: feature:422822-422993:1:exon
so has part: feature:423629-423828:1:exon
so has part: feature:424857-425067:1:exon
so has part: feature:426530-426646:1:exon
so has part: feature:426889-427067:1:exon
so has part: feature:428064-428162:1:exon
so has part: feature:429235-429326:1:exon
so has part: feature:430298-430446:1:exon
so has part: feature:431277-431388:1:exon
so has part: feature:432434-432649:1:exon
so has part: feature:433535-433635:1:exon
so has part: feature:433960-434129:1:exon
so has part: feature:434876-435009:1:exon
so has part: feature:435306-435376:1:exon
so has part: feature:435829-435943:1:exon
so has part: feature:436556-436715:1:exon
so has part: feature:437675-437796:1:exon
so has part: feature:437883-437993:1:exon
so has part: feature:438591-438757:1:exon
so has part: feature:439363-439444:1:exon
so has part: feature:440082-440283:1:exon
so has part: feature:441749-441897:1:exon
so has part: feature:442257-442497:1:exon
so has part: feature:443451-443530:1:exon
so has part: feature:444298-444391:1:exon
so has part: feature:444881-445397:1:exon
so has part: feature:446032-446196:1:exon
so has part: feature:447178-447297:1:exon
so has part: feature:448124-448285:1:exon
so has part: feature:448931-449060:1:exon
so has part: feature:449353-449491:1:exon
so has part: feature:449707-449872:1:exon
so has part: feature:450396-450658:1:exon
so has part: feature:451437-451612:1:exon
so has part: feature:452141-452288:1:exon
so has part: feature:452772-452911:1:exon
so has part: feature:453346-453623:1:exon
so has part: feature:454639-454813:1:exon
so has part: feature:455309-455441:1:exon
so has part: feature:456279-456475:1:exon
so has part: feature:457078-457197:1:exon
so has part: feature:458298-458486:1:exon
so has part: feature:458889-458989:1:exon
so has part: feature:459521-459656:1:exon
so has part: feature:460733-461096:1:exon
so has part: feature:462805-462833:1:exon

XP_030318178.1
type: Protein
SIO_000068: ncbiprotein

position:462833:1
position: 462833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415152-415514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:419991-420135:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:421714-421908:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:422822-422993:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:423629-423828:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:424857-425067:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:426530-426646:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:426889-427067:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:428064-428162:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:429235-429326:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:430298-430446:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:431277-431388:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:432434-432649:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:433535-433635:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:433960-434129:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:434876-435009:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:435306-435376:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:435829-435943:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:436556-436715:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:437675-437796:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:437883-437993:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:438591-438757:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:439363-439444:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:440082-440283:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:441749-441897:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:442257-442497:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:443451-443530:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:444298-444391:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:444881-445397:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:446032-446196:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:447178-447297:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:448124-448285:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:448931-449060:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:449353-449491:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:449707-449872:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:450396-450658:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:451437-451612:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:452141-452288:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:452772-452911:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:453346-453623:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:454639-454813:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:455309-455441:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:456279-456475:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:457078-457197:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:458298-458486:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:458889-458989:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:459521-459656:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:460733-461096:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:462805-462833:1:exon

ATP2A3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ATP2A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 497234..551065
location: region:497234-551065:1
so has part: feature:497234-551065:1:exon
subclass of: SO_0000010

103535807
type: Gene
SIO_000068: ncbigene

position:497234:1
position: 497234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551065:1
position: 551065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497234-551065:1:exon

ATP2A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ATP2A3
product: ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 long SRA reads, 27 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030462182.1
SIO_010081: ATP2A3
subclass of: SO_0000673
so part of: ATP2A3
location: join(497234..497366,515951..515968,516364..516446,520044..520148,520859..520997,523816..523896,524944..525029,525538..526002,531418..531506,533430..533532,533753..533884,534608..534733,535771..535989,536414..536749,536844..537064,537716..537918,538033..538118,538708..538841,539255..539372,540144..540261,542121..542193,546070..551065)
location: region:497234-551065:1
so has part: feature:497234-497366:1:exon
so has part: feature:515951-515968:1:exon
so has part: feature:516364-516446:1:exon
so has part: feature:520044-520148:1:exon
so has part: feature:520859-520997:1:exon
so has part: feature:523816-523896:1:exon
so has part: feature:524944-525029:1:exon
so has part: feature:525538-526002:1:exon
so has part: feature:531418-531506:1:exon
so has part: feature:533430-533532:1:exon
so has part: feature:533753-533884:1:exon
so has part: feature:534608-534733:1:exon
so has part: feature:535771-535989:1:exon
so has part: feature:536414-536749:1:exon
so has part: feature:536844-537064:1:exon
so has part: feature:537716-537918:1:exon
so has part: feature:538033-538118:1:exon
so has part: feature:538708-538841:1:exon
so has part: feature:539255-539372:1:exon
so has part: feature:540144-540261:1:exon
so has part: feature:542121-542193:1:exon
so has part: feature:546070-551065:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:497234-497366:1:exon

position:497366:1
position: 497366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:515951-515968:1:exon

position:515951:1
position: 515951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515968:1
position: 515968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:516364-516446:1:exon

position:516364:1
position: 516364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516446:1
position: 516446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:520044-520148:1:exon

position:520044:1
position: 520044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520148:1
position: 520148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:520859-520997:1:exon

position:520859:1
position: 520859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520997:1
position: 520997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:523816-523896:1:exon

position:523816:1
position: 523816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523896:1
position: 523896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:524944-525029:1:exon

position:524944:1
position: 524944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525029:1
position: 525029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:525538-526002:1:exon

position:525538:1
position: 525538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526002:1
position: 526002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:531418-531506:1:exon

position:531418:1
position: 531418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531506:1
position: 531506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:533430-533532:1:exon

position:533430:1
position: 533430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533532:1
position: 533532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:533753-533884:1:exon

position:533753:1
position: 533753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533884:1
position: 533884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:534608-534733:1:exon

position:534608:1
position: 534608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534733:1
position: 534733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:535771-535989:1:exon

position:535771:1
position: 535771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535989:1
position: 535989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:536414-536749:1:exon

position:536414:1
position: 536414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536749:1
position: 536749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:536844-537064:1:exon

position:536844:1
position: 536844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537064:1
position: 537064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:537716-537918:1:exon

position:537716:1
position: 537716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537918:1
position: 537918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:538033-538118:1:exon

position:538033:1
position: 538033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538118:1
position: 538118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:538708-538841:1:exon

position:538708:1
position: 538708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538841:1
position: 538841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:539255-539372:1:exon

position:539255:1
position: 539255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539372:1
position: 539372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:540144-540261:1:exon

position:540144:1
position: 540144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540261:1
position: 540261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:542121-542193:1:exon

position:542121:1
position: 542121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542193:1
position: 542193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:546070-551065:1:exon

position:546070:1
position: 546070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATP2A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ATP2A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sarcoplasmic/endoplasmic reticulum calcium ATPase 3
translation: MEAAHSLPVADVLRRFGVSESCGLSPEQVRRSREKYGPNELPAEEGKSLWELVLEQFEDLLVRILLMAAFLSFILAWFEEGEETTTAFVEPIVIIMILIANAVVGVWQERNAESAIEALKEYEPEMGKVIRADRSGVQRIRARDIVPGDIVEVAVGDKVPADIRIIEILSTTLRVDQSILTGESVSVIKHADPIPDPRAVNQDKKNMLFSGTNIAAGKALGVVIATGVYTEIGKIRNQMVETEPEKTPLQQKLDEFSQQLSKVIFLVCIAVWVINVSHFSDPVHGGSWFRGAIYYFKISVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCRMFIMEKVEGAQCSLHEFSITGSTYTPEGQILKDEKPVECGQYDGLVELATICALCNDSSLDYNESKKVYEKVGEATETALTCLVEKMNVFNTDTSKLSKVERANACNSVIKQLMRKECTLEFSRDRKSMSVYCTPTRPGHNSAGSKMFVKGAPESVIDRCTHVRVGTAKVLLTPPVREKILSRIRDWGMGIDTLRCLALATHDSPVRRETMQLHDSTTFIHYENNLTFVGCVGMLDPPRKEVTSSIEMCRKAGIRVIMITGDNKGTAVAICRRIGIFSETEDVTGKAYTGREFDELPPEAQRQACRDARCFARVEPAHKSRIVEYLQSFHEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKSAAEMVLSDDNFSTIVSAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAILGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKLPRNPKKPLISGWLFFRYLAIGVYVGLATVGAATWWFLYDAEGPQVSFHQLRNFMRCTEDNPLFEGIDCEIFESRYPTTMALSVLVTIEMCNALNSLSENQSLLRMPPWLNIWLLGAIIMSMALHFLILYVKPMPLIFQVTPLSWPQWVVVMKISLPVILLDEGLKYISRNHLDGILRTVSHTWSEDHQLKTCRTPEKGREQDMNYSKETLLTKGSLPCNSD
SIO_010081: ATP2A3
subclass of: SO_0000673
so part of: ATP2A3
location: join(497249..497366,515951..515968,516364..516446,520044..520148,520859..520997,523816..523896,524944..525029,525538..526002,531418..531506,533430..533532,533753..533884,534608..534733,535771..535989,536414..536749,536844..537064,537716..537918,538033..538118,538708..538841,539255..539372,540144..540261,542121..542193,546070..546142)
location: region:497249-546142:1
so has part: feature:497249-497366:1:exon
so has part: feature:515951-515968:1:exon
so has part: feature:516364-516446:1:exon
so has part: feature:520044-520148:1:exon
so has part: feature:520859-520997:1:exon
so has part: feature:523816-523896:1:exon
so has part: feature:524944-525029:1:exon
so has part: feature:525538-526002:1:exon
so has part: feature:531418-531506:1:exon
so has part: feature:533430-533532:1:exon
so has part: feature:533753-533884:1:exon
so has part: feature:534608-534733:1:exon
so has part: feature:535771-535989:1:exon
so has part: feature:536414-536749:1:exon
so has part: feature:536844-537064:1:exon
so has part: feature:537716-537918:1:exon
so has part: feature:538033-538118:1:exon
so has part: feature:538708-538841:1:exon
so has part: feature:539255-539372:1:exon
so has part: feature:540144-540261:1:exon
so has part: feature:542121-542193:1:exon
so has part: feature:546070-546142:1:exon

XP_030318042.1
type: Protein
SIO_000068: ncbiprotein

position:497249:1
position: 497249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546142:1
position: 546142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497249-497366:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:515951-515968:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:516364-516446:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:520044-520148:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:520859-520997:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:523816-523896:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:524944-525029:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:525538-526002:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:531418-531506:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:533430-533532:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:533753-533884:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:534608-534733:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:535771-535989:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:536414-536749:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:536844-537064:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:537716-537918:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:538033-538118:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:538708-538841:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:539255-539372:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:540144-540261:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:542121-542193:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:546070-546142:1:exon

P2RX1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: P2RX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 554156..569428
location: region:554156-569428:1
so has part: feature:554156-569428:1:exon
subclass of: SO_0000010

103535832
type: Gene
SIO_000068: ncbigene

position:554156:1
position: 554156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:569428:1
position: 569428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554156-569428:1:exon

P2RX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: P2RX1
product: purinergic receptor P2X 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030462429.1
SIO_010081: P2RX1
subclass of: SO_0000673
so part of: P2RX1
location: join(554156..554177,556383..556609,559422..559569,560054..560125,560531..560600,561097..561193,561833..561913,563340..563481,565154..565284,566023..566113,566706..566771,568060..568152,568698..568745,569009..569428)
location: region:554156-569428:1
so has part: feature:554156-554177:1:exon
so has part: feature:556383-556609:1:exon
so has part: feature:559422-559569:1:exon
so has part: feature:560054-560125:1:exon
so has part: feature:560531-560600:1:exon
so has part: feature:561097-561193:1:exon
so has part: feature:561833-561913:1:exon
so has part: feature:563340-563481:1:exon
so has part: feature:565154-565284:1:exon
so has part: feature:566023-566113:1:exon
so has part: feature:566706-566771:1:exon
so has part: feature:568060-568152:1:exon
so has part: feature:568698-568745:1:exon
so has part: feature:569009-569428:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:554156-554177:1:exon

position:554177:1
position: 554177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:556383-556609:1:exon

position:556383:1
position: 556383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556609:1
position: 556609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:559422-559569:1:exon

position:559422:1
position: 559422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559569:1
position: 559569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:560054-560125:1:exon

position:560054:1
position: 560054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560125:1
position: 560125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:560531-560600:1:exon

position:560531:1
position: 560531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560600:1
position: 560600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:561097-561193:1:exon

position:561097:1
position: 561097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561193:1
position: 561193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:561833-561913:1:exon

position:561833:1
position: 561833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561913:1
position: 561913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:563340-563481:1:exon

position:563340:1
position: 563340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563481:1
position: 563481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:565154-565284:1:exon

position:565154:1
position: 565154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565284:1
position: 565284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:566023-566113:1:exon

position:566023:1
position: 566023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566113:1
position: 566113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:566706-566771:1:exon

position:566706:1
position: 566706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566771:1
position: 566771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:568060-568152:1:exon

position:568060:1
position: 568060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:568152:1
position: 568152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:568698-568745:1:exon

position:568698:1
position: 568698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:568745:1
position: 568745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:569009-569428:1:exon

position:569009:1
position: 569009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

P2RX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: P2RX1
product: purinergic receptor P2X 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_008501936.2
SIO_010081: P2RX1
subclass of: SO_0000673
so part of: P2RX1
location: join(556348..556609,559422..559569,560054..560125,560531..560600,561097..561193,561833..561913,563340..563481,565154..565284,566023..566113,566706..566771,568060..568152,568698..568745,569009..569428)
location: region:556348-569428:1
so has part: feature:556348-556609:1:exon
so has part: feature:559422-559569:1:exon
so has part: feature:560054-560125:1:exon
so has part: feature:560531-560600:1:exon
so has part: feature:561097-561193:1:exon
so has part: feature:561833-561913:1:exon
so has part: feature:563340-563481:1:exon
so has part: feature:565154-565284:1:exon
so has part: feature:566023-566113:1:exon
so has part: feature:566706-566771:1:exon
so has part: feature:568060-568152:1:exon
so has part: feature:568698-568745:1:exon
so has part: feature:569009-569428:1:exon

position:556348:1
position: 556348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556348-556609:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:559422-559569:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:560054-560125:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560531-560600:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:561097-561193:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:561833-561913:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:563340-563481:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:565154-565284:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:566023-566113:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:566706-566771:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:568060-568152:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:568698-568745:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:569009-569428:1:exon

P2RX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: P2RX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2X purinoceptor 1
translation: MGQKFTEKVSAFLFEYDTPRMVLVRNKKVGLTFRLIQLIVLAYIIGWVFLYEKGYQSQDSVVSSVSVKLKGLTLTNESTVGPHIWDVVDYVFPPQGDNSFVVMTNFIITPGQKQGTCPELPDAGPCKDDSDCIRGKYSRQGQGLMTGRCVNFNNSVKTCEIFGWCPVENDDHVPKPALLSEAENFTLFIKNSITFPRFKVFRRNLVETVTKQYLKKCTYHRVTDPLCPVFELGYIVKESGQNFTFLAVKGGVVGITIDWNCDLDWPIRYCKPIYQFHGLYNDDTNVSPGFNFRYAKYYKEDGMEKRTLYKVFGIRFDILVNGKAGKFDIIPTMTTIGSGIGIFGVASVLCDLLLLHFLQGRDYYKQKKFKYAEQEPSKSHKKEKEPDSKP
SIO_010081: P2RX1
subclass of: SO_0000673
so part of: P2RX1
location: join(556473..556609,559422..559569,560054..560125,560531..560600,561097..561193,561833..561913,563340..563481,565154..565284,566023..566113,566706..566771,568060..568152,568698..568742)
location: region:556473-568742:1
so has part: feature:556473-556609:1:exon
so has part: feature:559422-559569:1:exon
so has part: feature:560054-560125:1:exon
so has part: feature:560531-560600:1:exon
so has part: feature:561097-561193:1:exon
so has part: feature:561833-561913:1:exon
so has part: feature:563340-563481:1:exon
so has part: feature:565154-565284:1:exon
so has part: feature:566023-566113:1:exon
so has part: feature:566706-566771:1:exon
so has part: feature:568060-568152:1:exon
so has part: feature:568698-568742:1:exon

XP_030318289.1
type: Protein
SIO_000068: ncbiprotein

position:556473:1
position: 556473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:568742:1
position: 568742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556473-556609:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:559422-559569:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:560054-560125:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560531-560600:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:561097-561193:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:561833-561913:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:563340-563481:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:565154-565284:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:566023-566113:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:566706-566771:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:568060-568152:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:568698-568742:1:exon

P2RX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: P2RX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2X purinoceptor 1
translation: MGQKFTEKVSAFLFEYDTPRMVLVRNKKVGLTFRLIQLIVLAYIIGWVFLYEKGYQSQDSVVSSVSVKLKGLTLTNESTVGPHIWDVVDYVFPPQGDNSFVVMTNFIITPGQKQGTCPELPDAGPCKDDSDCIRGKYSRQGQGLMTGRCVNFNNSVKTCEIFGWCPVENDDHVPKPALLSEAENFTLFIKNSITFPRFKVFRRNLVETVTKQYLKKCTYHRVTDPLCPVFELGYIVKESGQNFTFLAVKGGVVGITIDWNCDLDWPIRYCKPIYQFHGLYNDDTNVSPGFNFRYAKYYKEDGMEKRTLYKVFGIRFDILVNGKAGKFDIIPTMTTIGSGIGIFGVASVLCDLLLLHFLQGRDYYKQKKFKYAEQEPSKSHKKEKEPDSKP
SIO_010081: P2RX1
subclass of: SO_0000673
so part of: P2RX1
location: join(556473..556609,559422..559569,560054..560125,560531..560600,561097..561193,561833..561913,563340..563481,565154..565284,566023..566113,566706..566771,568060..568152,568698..568742)
location: region:556473-568742:1
so has part: feature:556473-556609:1:exon
so has part: feature:559422-559569:1:exon
so has part: feature:560054-560125:1:exon
so has part: feature:560531-560600:1:exon
so has part: feature:561097-561193:1:exon
so has part: feature:561833-561913:1:exon
so has part: feature:563340-563481:1:exon
so has part: feature:565154-565284:1:exon
so has part: feature:566023-566113:1:exon
so has part: feature:566706-566771:1:exon
so has part: feature:568060-568152:1:exon
so has part: feature:568698-568742:1:exon

XP_008500158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:556473-556609:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:559422-559569:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:560054-560125:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560531-560600:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:561097-561193:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:561833-561913:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:563340-563481:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:565154-565284:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:566023-566113:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:566706-566771:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:568060-568152:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:568698-568742:1:exon

CAMKK1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: CAMKK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 576312..652183
location: region:576312-652183:1
so has part: feature:576312-652183:1:exon
subclass of: SO_0000010

103535809
type: Gene
SIO_000068: ncbigene

position:576312:1
position: 576312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:652183:1
position: 652183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576312-652183:1:exon

CAMKK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CAMKK1
product: calcium/calmodulin dependent protein kinase kinase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 62% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030462424.1
SIO_010081: CAMKK1
subclass of: SO_0000673
so part of: CAMKK1
location: join(576312..576347,609229..609757,616544..616591,618166..618219,625512..625563,626068..626201,626806..626842,627896..627917,629780..629868,636936..637135,637796..637849,638905..638978,642719..642806,643381..643509,644478..644581,651940..652183)
location: region:576312-652183:1
so has part: feature:576312-576347:1:exon
so has part: feature:609229-609757:1:exon
so has part: feature:616544-616591:1:exon
so has part: feature:618166-618219:1:exon
so has part: feature:625512-625563:1:exon
so has part: feature:626068-626201:1:exon
so has part: feature:626806-626842:1:exon
so has part: feature:627896-627917:1:exon
so has part: feature:629780-629868:1:exon
so has part: feature:636936-637135:1:exon
so has part: feature:637796-637849:1:exon
so has part: feature:638905-638978:1:exon
so has part: feature:642719-642806:1:exon
so has part: feature:643381-643509:1:exon
so has part: feature:644478-644581:1:exon
so has part: feature:651940-652183:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:576312-576347:1:exon

position:576347:1
position: 576347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:609229-609757:1:exon

position:609229:1
position: 609229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:609757:1
position: 609757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:616544-616591:1:exon

position:616544:1
position: 616544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:616591:1
position: 616591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:618166-618219:1:exon

position:618166:1
position: 618166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:618219:1
position: 618219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:625512-625563:1:exon

position:625512:1
position: 625512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:625563:1
position: 625563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:626068-626201:1:exon

position:626068:1
position: 626068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:626201:1
position: 626201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:626806-626842:1:exon

position:626806:1
position: 626806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:626842:1
position: 626842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:627896-627917:1:exon

position:627896:1
position: 627896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627917:1
position: 627917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:629780-629868:1:exon

position:629780:1
position: 629780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:629868:1
position: 629868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:636936-637135:1:exon

position:636936:1
position: 636936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:637135:1
position: 637135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:637796-637849:1:exon

position:637796:1
position: 637796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:637849:1
position: 637849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:638905-638978:1:exon

position:638905:1
position: 638905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638978:1
position: 638978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:642719-642806:1:exon

position:642719:1
position: 642719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:642806:1
position: 642806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:643381-643509:1:exon

position:643381:1
position: 643381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643509:1
position: 643509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:644478-644581:1:exon

position:644478:1
position: 644478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644581:1
position: 644581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:651940-652183:1:exon

position:651940:1
position: 651940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CAMKK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CAMKK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium/calmodulin-dependent protein kinase kinase 1
translation: MGDSPTNSMDTGIATDFKDTQTELAERVAAINVTLGPDRRDQNGEEENDTVFSDNVKEIQRNGVESEVGMDEFQQSEDAHGKHGPKRPLTRPVLSSRKLSLQERSSGGYLASSTTPSSGHYATGPSPRIMRRPTIESNRVSISDSEDCVQLNQYKLQSEIGKGSYGVVKLAYNENDDQYYAMKVLSKKKLLKQYGFPRRPPPRGSKASSGEQPKPMAPLDRVYQEIAILKKLDHVNIVKLIEVLDDPAEDNLYMVFDLLRKGPVMEVPSAQPFSEEQARLYFRDIVLGIEYLHYQKIIHRDIKPSNLLLGDDGHVKIADFGVSNQFEGNDAQLSSTAGTPAFMAPEAISDTGKSFSGKALDVWAMGITLYCFVYGKCPFIDEYILGLHNRIKNKPVEFPEEGQISEELKDLILRMLDKNPETRITVPEIKVHPWLTKGGEEPLPLEEEHCTVVEVTEEEVKNSVKMIPSLPAVILVKAMLRKRSFGNPFEVQTRREERSMSAPGNLLIKQGSREGARDPDLPDVCEDEATS
SIO_010081: CAMKK1
subclass of: SO_0000673
so part of: CAMKK1
location: join(609320..609757,616544..616591,618166..618219,625512..625563,626068..626201,626806..626842,627896..627917,629780..629868,636936..637135,637796..637849,638905..638978,642719..642806,643381..643509,644478..644581,651940..652012)
location: region:609320-652012:1
so has part: feature:609320-609757:1:exon
so has part: feature:616544-616591:1:exon
so has part: feature:618166-618219:1:exon
so has part: feature:625512-625563:1:exon
so has part: feature:626068-626201:1:exon
so has part: feature:626806-626842:1:exon
so has part: feature:627896-627917:1:exon
so has part: feature:629780-629868:1:exon
so has part: feature:636936-637135:1:exon
so has part: feature:637796-637849:1:exon
so has part: feature:638905-638978:1:exon
so has part: feature:642719-642806:1:exon
so has part: feature:643381-643509:1:exon
so has part: feature:644478-644581:1:exon
so has part: feature:651940-652012:1:exon

XP_030318284.1
type: Protein
SIO_000068: ncbiprotein

position:609320:1
position: 609320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:652012:1
position: 652012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609320-609757:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:616544-616591:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:618166-618219:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:625512-625563:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:626068-626201:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:626806-626842:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:627896-627917:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:629780-629868:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636936-637135:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:637796-637849:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:638905-638978:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:642719-642806:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:643381-643509:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:644478-644581:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:651940-652012:1:exon

MIS12
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: MIS12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(658291..660625)
location: region:658291-660625:-1
so has part: feature:658291-660625:-1:exon
subclass of: SO_0000010

103535833
type: Gene
SIO_000068: ncbigene

position:658291:-1
position: 658291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660625:-1
position: 660625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:658291-660625:-1:exon

MIS12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MIS12
product: MIS12 kinetochore complex component
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030462543.1
SIO_010081: MIS12
subclass of: SO_0000673
so part of: MIS12
location: complement(join(658291..659561,659909..660625))
location: region:658291-660625:-1
so has part: feature:659909-660625:-1:exon
so has part: feature:658291-659561:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:659909-660625:-1:exon

position:659909:-1
position: 659909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:658291-659561:-1:exon

position:659561:-1
position: 659561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MIS12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MIS12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein MIS12 homolog
translation: MSVDPMAYEAQFFGFTPQTCMLRVYIAFQDYLFEVMLVVEGVILKKLDGIPGCKISPFQIRKSTEKFLLFLKDHFDKLFSKMEQVLLQLVLNIPKNVLLPEDKVHQQYPCSKEEFQALQAEIQQLQEQCRAEVSAGQALRAELEEQKAVRAELEKVLQWFDGLENACREHGTRDFKESFAFLLKNSRKLRDVLREVEEKSQKNEKA
SIO_010081: MIS12
subclass of: SO_0000673
so part of: MIS12
location: complement(658894..659514)
location: region:658894-659514:-1
so has part: feature:658894-659514:-1:exon

XP_030318403.1
type: Protein
SIO_000068: ncbiprotein

position:658894:-1
position: 658894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:659514:-1
position: 659514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:658894-659514:-1:exon

DERL2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: DERL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 660184..666069
location: region:660184-666069:1
so has part: feature:660184-666069:1:exon
subclass of: SO_0000010

103535810
type: Gene
SIO_000068: ncbigene

position:660184:1
position: 660184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:666069:1
position: 666069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660184-666069:1:exon

DERL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: DERL2
product: derlin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 2 long SRA reads, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_008501910.2
SIO_010081: DERL2
subclass of: SO_0000673
so part of: DERL2
location: join(660184..660296,660737..660802,661069..661142,661584..661677,662126..662321,662860..662950,665133..666069)
location: region:660184-666069:1
so has part: feature:660184-660296:1:exon
so has part: feature:660737-660802:1:exon
so has part: feature:661069-661142:1:exon
so has part: feature:661584-661677:1:exon
so has part: feature:662126-662321:1:exon
so has part: feature:662860-662950:1:exon
so has part: feature:665133-666069:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:660184-660296:1:exon

position:660296:1
position: 660296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:660737-660802:1:exon

position:660737:1
position: 660737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660802:1
position: 660802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:661069-661142:1:exon

position:661069:1
position: 661069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:661142:1
position: 661142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:661584-661677:1:exon

position:661584:1
position: 661584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:661677:1
position: 661677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:662126-662321:1:exon

position:662126:1
position: 662126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:662321:1
position: 662321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:662860-662950:1:exon

position:662860:1
position: 662860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:662950:1
position: 662950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:665133-666069:1:exon

position:665133:1
position: 665133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DERL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: DERL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: derlin-2
translation: MAYQTFRQEYLQVPPVTRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQVWRLITNYLFFGPVGFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGLLMTLFGLFVNLVFLGQAFTIMLVYVWSRRNPYVRMNFFGLLIFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGHIYFFLEDVFPNQPGGGRLLRTPSVLKAIFDTPEDDPNYNPLPVRKTRGFAWGEGQRLGG
SIO_010081: DERL2
subclass of: SO_0000673
so part of: DERL2
location: join(660204..660296,660737..660802,661069..661142,661584..661677,662126..662321,662860..662950,665133..665238)
location: region:660204-665238:1
so has part: feature:660204-660296:1:exon
so has part: feature:660737-660802:1:exon
so has part: feature:661069-661142:1:exon
so has part: feature:661584-661677:1:exon
so has part: feature:662126-662321:1:exon
so has part: feature:662860-662950:1:exon
so has part: feature:665133-665238:1:exon

XP_008500132.2
type: Protein
SIO_000068: ncbiprotein

position:660204:1
position: 660204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:665238:1
position: 665238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660204-660296:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:660737-660802:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:661069-661142:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:661584-661677:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:662126-662321:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:662860-662950:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:665133-665238:1:exon

DHX33
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: DHX33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 667811..676975
location: region:667811-676975:1
so has part: feature:667811-676975:1:exon
subclass of: SO_0000010

103535811
type: Gene
SIO_000068: ncbigene

position:667811:1
position: 667811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:676975:1
position: 676975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:667811-676975:1:exon

DHX33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: DHX33
product: DEAH-box helicase 33
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 6 bases in 5 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 76% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030462658.1
SIO_010081: DHX33
subclass of: SO_0000673
so part of: DHX33
location: join(667811..668007,668643..668809,669658..669846,670479..670590,670956..671114,671518..671607,672144..672276,672837..672998,673822..673908,675335..676975)
location: region:667811-676975:1
so has part: feature:667811-668007:1:exon
so has part: feature:668643-668809:1:exon
so has part: feature:669658-669846:1:exon
so has part: feature:670479-670590:1:exon
so has part: feature:670956-671114:1:exon
so has part: feature:671518-671607:1:exon
so has part: feature:672144-672276:1:exon
so has part: feature:672837-672998:1:exon
so has part: feature:673822-673908:1:exon
so has part: feature:675335-676975:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:667811-668007:1:exon

position:668007:1
position: 668007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:668643-668809:1:exon

position:668643:1
position: 668643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:668809:1
position: 668809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:669658-669846:1:exon

position:669658:1
position: 669658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:669846:1
position: 669846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:670479-670590:1:exon

position:670479:1
position: 670479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:670590:1
position: 670590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:670956-671114:1:exon

position:670956:1
position: 670956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671114:1
position: 671114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:671518-671607:1:exon

position:671518:1
position: 671518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671607:1
position: 671607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:672144-672276:1:exon

position:672144:1
position: 672144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672276:1
position: 672276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:672837-672998:1:exon

position:672837:1
position: 672837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672998:1
position: 672998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:673822-673908:1:exon

position:673822:1
position: 673822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:673908:1
position: 673908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:675335-676975:1:exon

position:675335:1
position: 675335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DHX33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: DHX33
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 6 bases in 5 codons; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:671558..671560,aa:OTHER)
transl except: (pos:672220..672222,aa:OTHER)
product: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DHX33
translation: MLLREAIGDXLLRKYSVVILDEAHERTIHTDVLFGXVKAAQKKRKELGKLPLKVCVCPWDDSDHQSATMDVDQFSSTSMGLSSLFRRPAASSHPDLYTKQPQSDYLQAALVSVFQIHQEAPSSQDILVFLTGQEEIEAMTKTCRDIAKHLPEGCPQMAVMPLYASLPYCQQLRVFQAAPKGCRKVILSTNIAETSITITGIKYVVDTGMVKAKKYSPEIGLEVLAVQRVSKAQAWQSGRRRAGRESXVCYRLYTEDEFEKFDKMTVPEIQRCNLASVMLQAPWPXEIPNVXTFDFMSKPSPDAIQAAIEQXDLLGAVGSKKGRISLSXPPLEGKMAAFPLEPKFSKTILPVPQTSPLHRGMILDHSIGTARQWTVYSLPALQRRKGRKVPYLSGRKFILQEWCKENFVKQQEHVACVRCQSSTQEHCVKLSMPIESSRSDTGSVRRCLAHSLFMNAAELQPDGTYSTLDSHQVVNIHPSSVLFHCKPACVVYNGLLHTNKCYMRDLCVVDAEWLYEAAPQYFRRKLRTAKN
SIO_010081: DHX33
subclass of: SO_0000673
so part of: DHX33
location: join(667826..668007,668643..668809,669658..669846,670479..670590,670956..671114,671518..671607,672144..672276,672837..672998,673822..673908,675335..675643)
location: region:667826-675643:1
so has part: feature:667826-668007:1:exon
so has part: feature:668643-668809:1:exon
so has part: feature:669658-669846:1:exon
so has part: feature:670479-670590:1:exon
so has part: feature:670956-671114:1:exon
so has part: feature:671518-671607:1:exon
so has part: feature:672144-672276:1:exon
so has part: feature:672837-672998:1:exon
so has part: feature:673822-673908:1:exon
so has part: feature:675335-675643:1:exon

XP_030318518.1
type: Protein
SIO_000068: ncbiprotein

position:667826:1
position: 667826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:675643:1
position: 675643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:667826-668007:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:668643-668809:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:669658-669846:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:670479-670590:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:670956-671114:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:671518-671607:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:672144-672276:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:672837-672998:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:673822-673908:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:675335-675643:1:exon

C1QBP
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: C1QBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 677813..682197
location: region:677813-682197:1
so has part: feature:677813-682197:1:exon
subclass of: SO_0000010

103535834
type: Gene
SIO_000068: ncbigene

position:677813:1
position: 677813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:682197:1
position: 682197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:677813-682197:1:exon

C1QBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: C1QBP
product: complement C1q binding protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 long SRA read, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030462501.1
SIO_010081: C1QBP
subclass of: SO_0000673
so part of: C1QBP
location: join(677813..678167,678711..678861,679301..679388,679873..679968,680795..680917,681779..682197)
location: region:677813-682197:1
so has part: feature:677813-678167:1:exon
so has part: feature:678711-678861:1:exon
so has part: feature:679301-679388:1:exon
so has part: feature:679873-679968:1:exon
so has part: feature:680795-680917:1:exon
so has part: feature:681779-682197:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:677813-678167:1:exon

position:678167:1
position: 678167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:678711-678861:1:exon

position:678711:1
position: 678711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678861:1
position: 678861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:679301-679388:1:exon

position:679301:1
position: 679301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:679388:1
position: 679388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:679873-679968:1:exon

position:679873:1
position: 679873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:679968:1
position: 679968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:680795-680917:1:exon

position:680795:1
position: 680795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:680917:1
position: 680917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:681779-682197:1:exon

position:681779:1
position: 681779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C1QBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: C1QBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complement component 1 Q subcomponent-binding protein, mitochondrial
translation: MLLARALRAAAALSPPLRHPPRRLLLLSPSFSFSSSFPRTLLPAPAASPPLVRSLWQLGGSGRTGLLRPRRGSAGGVSCGCGGLHTEGDKAFAQFLTDEIKEERKIQKHKSLPKVSGGWELEVHGTEAKLVRKIAGEKITVTFNINNSIPPSAEEETQEEQKPDEQEPDLTSTPNFVVEVIKDDTKQTLVFDCHYPEDEIGHEGEEESDIFTIREVSFQPTGESDWKDTNYTLNTDSLDWALYDHLMDFLADRGVDNTFADELIELSTALEHQEYIKFLEDLKSFVKCQ
SIO_010081: C1QBP
subclass of: SO_0000673
so part of: C1QBP
location: join(677906..678167,678711..678861,679301..679388,679873..679968,680795..680917,681779..681928)
location: region:677906-681928:1
so has part: feature:677906-678167:1:exon
so has part: feature:678711-678861:1:exon
so has part: feature:679301-679388:1:exon
so has part: feature:679873-679968:1:exon
so has part: feature:680795-680917:1:exon
so has part: feature:681779-681928:1:exon

XP_030318361.1
type: Protein
SIO_000068: ncbiprotein

position:677906:1
position: 677906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:681928:1
position: 681928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:677906-678167:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:678711-678861:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:679301-679388:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:679873-679968:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:680795-680917:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:681779-681928:1:exon

RPAIN
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: RPAIN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(682711..685820)
location: region:682711-685820:-1
so has part: feature:682711-685820:-1:exon
subclass of: SO_0000010

103535835
type: Gene
SIO_000068: ncbigene

position:682711:-1
position: 682711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685820:-1
position: 685820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:682711-685820:-1:exon

RPAIN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RPAIN
product: RPA interacting protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030462502.1
SIO_010081: RPAIN
subclass of: SO_0000673
so part of: RPAIN
location: complement(join(682711..682930,683464..683598,683719..683782,683981..684095,684519..684582,685303..685485,685726..685820))
location: region:682711-685820:-1
so has part: feature:685726-685820:-1:exon
so has part: feature:685303-685485:-1:exon
so has part: feature:684519-684582:-1:exon
so has part: feature:683981-684095:-1:exon
so has part: feature:683719-683782:-1:exon
so has part: feature:683464-683598:-1:exon
so has part: feature:682711-682930:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:685726-685820:-1:exon

position:685726:-1
position: 685726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:685303-685485:-1:exon

position:685303:-1
position: 685303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685485:-1
position: 685485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:684519-684582:-1:exon

position:684519:-1
position: 684519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684582:-1
position: 684582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:683981-684095:-1:exon

position:683981:-1
position: 683981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684095:-1
position: 684095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:683719-683782:-1:exon

position:683719:-1
position: 683719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683782:-1
position: 683782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:683464-683598:-1:exon

position:683464:-1
position: 683464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683598:-1
position: 683598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:682711-682930:-1:exon

position:682930:-1
position: 682930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPAIN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RPAIN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RPA-interacting protein
translation: MEAAARWPRARYRGPSVPPWKEAYRKRCMERLRSSRAKLLDRYRRAGDGVCGPAALLVQEVMEQEWQTLQDGQETLPSLRTGEALAQMQEDPDELAVLEEIQQELILQEQSLIEEYERSLQFDEECLNAMLEGLDASDKIICPVCRKNNLTVRNHAVLCQCGLYISTQGMTEEKLRALLEQTVTEHSQRCSHNPEFTVTTGMEEETTLLMSCPVCDSWTILL
SIO_010081: RPAIN
subclass of: SO_0000673
so part of: RPAIN
location: complement(join(682901..682930,683464..683598,683719..683782,683981..684095,684519..684582,685303..685485,685726..685803))
location: region:682901-685803:-1
so has part: feature:685726-685803:-1:exon
so has part: feature:685303-685485:-1:exon
so has part: feature:684519-684582:-1:exon
so has part: feature:683981-684095:-1:exon
so has part: feature:683719-683782:-1:exon
so has part: feature:683464-683598:-1:exon
so has part: feature:682901-682930:-1:exon

XP_030318362.1
type: Protein
SIO_000068: ncbiprotein

position:682901:-1
position: 682901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685803:-1
position: 685803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:685726-685803:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:685303-685485:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:684519-684582:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:683981-684095:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:683719-683782:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:683464-683598:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:682901-682930:-1:exon

NUP88
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: NUP88
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 686234..696303
location: region:686234-696303:1
so has part: feature:686234-696303:1:exon
subclass of: SO_0000010

103535812
type: Gene
SIO_000068: ncbigene

position:686234:1
position: 686234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:696303:1
position: 696303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:686234-696303:1:exon

NUP88
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NUP88
product: nucleoporin 88
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030462531.1
SIO_010081: NUP88
subclass of: SO_0000673
so part of: NUP88
location: join(686234..686491,686972..687141,687559..687684,687868..687954,688628..688804,689711..689894,690348..690498,691128..691226,691349..691439,692104..692205,693255..693413,693807..693932,694471..694536,694762..694842,695153..695279,695609..695727,696090..696303)
location: region:686234-696303:1
so has part: feature:686234-686491:1:exon
so has part: feature:686972-687141:1:exon
so has part: feature:687559-687684:1:exon
so has part: feature:687868-687954:1:exon
so has part: feature:688628-688804:1:exon
so has part: feature:689711-689894:1:exon
so has part: feature:690348-690498:1:exon
so has part: feature:691128-691226:1:exon
so has part: feature:691349-691439:1:exon
so has part: feature:692104-692205:1:exon
so has part: feature:693255-693413:1:exon
so has part: feature:693807-693932:1:exon
so has part: feature:694471-694536:1:exon
so has part: feature:694762-694842:1:exon
so has part: feature:695153-695279:1:exon
so has part: feature:695609-695727:1:exon
so has part: feature:696090-696303:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:686234-686491:1:exon

position:686491:1
position: 686491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:686972-687141:1:exon

position:686972:1
position: 686972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:687141:1
position: 687141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:687559-687684:1:exon

position:687559:1
position: 687559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:687684:1
position: 687684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:687868-687954:1:exon

position:687868:1
position: 687868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:687954:1
position: 687954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:688628-688804:1:exon

position:688628:1
position: 688628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:688804:1
position: 688804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:689711-689894:1:exon

position:689711:1
position: 689711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:689894:1
position: 689894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:690348-690498:1:exon

position:690348:1
position: 690348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:690498:1
position: 690498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:691128-691226:1:exon

position:691128:1
position: 691128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:691226:1
position: 691226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:691349-691439:1:exon

position:691349:1
position: 691349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:691439:1
position: 691439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:692104-692205:1:exon

position:692104:1
position: 692104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:692205:1
position: 692205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:693255-693413:1:exon

position:693255:1
position: 693255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:693413:1
position: 693413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:693807-693932:1:exon

position:693807:1
position: 693807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:693932:1
position: 693932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:694471-694536:1:exon

position:694471:1
position: 694471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:694536:1
position: 694536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:694762-694842:1:exon

position:694762:1
position: 694762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:694842:1
position: 694842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:695153-695279:1:exon

position:695153:1
position: 695153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:695279:1
position: 695279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:695609-695727:1:exon

position:695609:1
position: 695609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:695727:1
position: 695727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:696090-696303:1:exon

position:696090:1
position: 696090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NUP88
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NUP88
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear pore complex protein Nup88
translation: MAAECGAAEAVAEQWRAALPQHAVLGRLRERAPGPSPHPPRTPLIRDLLVGAGGDLLLWDPHARAFHTIALRRLGGNDPAALSRSQTLLCINPPLFEVYQTLLSPTQHHVALIGTKGLMVLELPKRWGKSSEFEGGKSTVNCSTIPIAERFFTSSTSLTLKHAAWYPCETLEPHIVLLTSDNTVRFYSLKVPQTPIKVIAVSDTEEETLTINKGRAYTASLGETAVAFDFGPLVPVPRNALDQRGSEEVLAYPLYILYENGETFLTYISLLQSSGNLGKLLGPLPMHPAAEDNYGYDACAVLCLPCVPNILVIATEAGMLYHCVVLDGEEDDEQSEKSWDPRADLIPSLYVFECVELELALKLASGDEEEPLDSDFSCPIKLHRDPKCPSRYHCTHEAGVHSVGLTWISKLHKFLRSDEEDKDSLQELGADQKCFVEHILCTKPLPCRQPAPIRGFWIVSDILGPTMICITNTYECITRPLLSTVHPASPPLLCTREDEDVAVSPLRILAKSQHSFEKHIRGILQRSSANPLFLKSADKDTAPPPEECLQLLSRATQVFREEYILKQDLAREEIQQRVKLLWRQKKKQLEDLNYLREEKKSLREMAERLADKYEEAKEKQEDIMNRMKKVLRSFHSQLPVLSDSEKDMRKELQTVHDQLQHLSNAIRQVKMKMEYQQKMMEKGTGPRQPSISLSAYQRKCIQTVLKEEGDRIREMVKQINDIRSHVNF
SIO_010081: NUP88
subclass of: SO_0000673
so part of: NUP88
location: join(686234..686491,686972..687141,687559..687684,687868..687954,688628..688804,689711..689894,690348..690498,691128..691226,691349..691439,692104..692205,693255..693413,693807..693932,694471..694536,694762..694842,695153..695279,695609..695727,696090..696153)
location: region:686234-696153:1
so has part: feature:686234-686491:1:exon
so has part: feature:686972-687141:1:exon
so has part: feature:687559-687684:1:exon
so has part: feature:687868-687954:1:exon
so has part: feature:688628-688804:1:exon
so has part: feature:689711-689894:1:exon
so has part: feature:690348-690498:1:exon
so has part: feature:691128-691226:1:exon
so has part: feature:691349-691439:1:exon
so has part: feature:692104-692205:1:exon
so has part: feature:693255-693413:1:exon
so has part: feature:693807-693932:1:exon
so has part: feature:694471-694536:1:exon
so has part: feature:694762-694842:1:exon
so has part: feature:695153-695279:1:exon
so has part: feature:695609-695727:1:exon
so has part: feature:696090-696153:1:exon

XP_030318391.1
type: Protein
SIO_000068: ncbiprotein

position:696153:1
position: 696153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:686234-686491:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:686972-687141:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:687559-687684:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:687868-687954:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:688628-688804:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:689711-689894:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:690348-690498:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:691128-691226:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:691349-691439:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:692104-692205:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:693255-693413:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:693807-693932:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:694471-694536:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:694762-694842:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:695153-695279:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:695609-695727:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:696090-696153:1:exon

RABEP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: RABEP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(700028..744193)
location: region:700028-744193:-1
so has part: feature:700028-744193:-1:exon
subclass of: SO_0000010

103535813
type: Gene
SIO_000068: ncbigene

position:700028:-1
position: 700028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744193:-1
position: 744193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:700028-744193:-1:exon

RABEP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RABEP1
product: rabaptin, RAB GTPase binding effector protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 21 ESTs, 1 long SRA read, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_030462532.1
SIO_010081: RABEP1
subclass of: SO_0000673
so part of: RABEP1
location: complement(join(700028..700668,702402..702518,703325..703423,703948..704003,704290..704479,705174..705314,706710..706808,708058..708174,708992..709096,711994..712461,715007..715132,716079..716257,717010..717145,717585..717704,722984..723144,723941..724144,726105..726233,743713..744193))
location: region:700028-744193:-1
so has part: feature:743713-744193:-1:exon
so has part: feature:726105-726233:-1:exon
so has part: feature:723941-724144:-1:exon
so has part: feature:722984-723144:-1:exon
so has part: feature:717585-717704:-1:exon
so has part: feature:717010-717145:-1:exon
so has part: feature:716079-716257:-1:exon
so has part: feature:715007-715132:-1:exon
so has part: feature:711994-712461:-1:exon
so has part: feature:708992-709096:-1:exon
so has part: feature:708058-708174:-1:exon
so has part: feature:706710-706808:-1:exon
so has part: feature:705174-705314:-1:exon
so has part: feature:704290-704479:-1:exon
so has part: feature:703948-704003:-1:exon
so has part: feature:703325-703423:-1:exon
so has part: feature:702402-702518:-1:exon
so has part: feature:700028-700668:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:743713-744193:-1:exon

position:743713:-1
position: 743713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:726105-726233:-1:exon

position:726105:-1
position: 726105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:726233:-1
position: 726233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:723941-724144:-1:exon

position:723941:-1
position: 723941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:724144:-1
position: 724144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:722984-723144:-1:exon

position:722984:-1
position: 722984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723144:-1
position: 723144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:717585-717704:-1:exon

position:717585:-1
position: 717585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717704:-1
position: 717704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:717010-717145:-1:exon

position:717010:-1
position: 717010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717145:-1
position: 717145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:716079-716257:-1:exon

position:716079:-1
position: 716079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:716257:-1
position: 716257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:715007-715132:-1:exon

position:715007:-1
position: 715007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715132:-1
position: 715132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:711994-712461:-1:exon

position:711994:-1
position: 711994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712461:-1
position: 712461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:708992-709096:-1:exon

position:708992:-1
position: 708992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709096:-1
position: 709096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:708058-708174:-1:exon

position:708058:-1
position: 708058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708174:-1
position: 708174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:706710-706808:-1:exon

position:706710:-1
position: 706710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:706808:-1
position: 706808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:705174-705314:-1:exon

position:705174:-1
position: 705174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705314:-1
position: 705314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:704290-704479:-1:exon

position:704290:-1
position: 704290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704479:-1
position: 704479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:703948-704003:-1:exon

position:703948:-1
position: 703948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704003:-1
position: 704003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:703325-703423:-1:exon

position:703325:-1
position: 703325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703423:-1
position: 703423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:702402-702518:-1:exon

position:702402:-1
position: 702402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702518:-1
position: 702518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:700028-700668:-1:exon

position:700668:-1
position: 700668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RABEP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RABEP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab GTPase-binding effector protein 1
translation: MAQPGPSPPTDVALLQRVAELEKVNAEFMRTKQQLEQEFNQKRAKFKELYLAKEEDLKRQNAVLQAAQDDLGQLRTQLMEAHAEMENIKAIATVSENTKQEAIDEVKRQWQEEVASLQAIMKETVRDYELQYHHRMEQERAQWNQYRENVEREIAELRRRLSEGQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKEKLTGAEEKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRLSKRKEEKQKDSDDETKASCSLGQDETLAQLSSEEVHVNSTHGSAHSLDADLLLSSGESFNKSDNDMFKDGLRRAQSTDSLGTSGSLQSKALGYNNKAKSAGNLDESDFGPLVGADSVSENFDTASLGSLQMPSGFMLTKDQEKAIKAMTPEQEETASLLSSVTQGVESAYVSPSGYRLVSETEWNLLQKEVQNAGNKLGRRCDMCSNYEKQLQGIQIQEAETRDQVKKLQMMLRQANDQLEKTMKDKQELEDYMKQSAEDSSNQISLLMAKCQKSENLLSELQQAFSQAKRSVQEQMAVLTQSREQVSEELVRLQKDNESLQGKHSLHVSLQQAEDFVLPEAAEELRELVLKYREDIIRVRTAADHLEEKLKAEILFLKEQIQAEQYLKENIEETLQLEIENCKEEIASISSLKAELERIKVEKEQLESSSQENLQQLESLQETKNTLEEQLKKETAAKANLEQLVFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADSLERIRAILNDTKLTDINQLPET
SIO_010081: RABEP1
subclass of: SO_0000673
so part of: RABEP1
location: complement(join(700567..700668,702402..702518,703325..703423,703948..704003,704290..704479,705174..705314,706710..706808,708058..708174,708992..709096,711994..712461,715007..715132,716079..716257,717010..717145,717585..717704,722984..723144,723941..724144,726105..726233,743713..743746))
location: region:700567-743746:-1
so has part: feature:743713-743746:-1:exon
so has part: feature:726105-726233:-1:exon
so has part: feature:723941-724144:-1:exon
so has part: feature:722984-723144:-1:exon
so has part: feature:717585-717704:-1:exon
so has part: feature:717010-717145:-1:exon
so has part: feature:716079-716257:-1:exon
so has part: feature:715007-715132:-1:exon
so has part: feature:711994-712461:-1:exon
so has part: feature:708992-709096:-1:exon
so has part: feature:708058-708174:-1:exon
so has part: feature:706710-706808:-1:exon
so has part: feature:705174-705314:-1:exon
so has part: feature:704290-704479:-1:exon
so has part: feature:703948-704003:-1:exon
so has part: feature:703325-703423:-1:exon
so has part: feature:702402-702518:-1:exon
so has part: feature:700567-700668:-1:exon

XP_030318392.1
type: Protein
SIO_000068: ncbiprotein

position:700567:-1
position: 700567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743746:-1
position: 743746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743713-743746:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:726105-726233:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:723941-724144:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:722984-723144:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:717585-717704:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:717010-717145:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:716079-716257:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:715007-715132:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:711994-712461:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:708992-709096:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:708058-708174:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:706710-706808:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:705174-705314:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:704290-704479:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:703948-704003:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:703325-703423:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:702402-702518:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:700567-700668:-1:exon

RFC2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: RFC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(751983..759018)
location: region:751983-759018:-1
so has part: feature:751983-759018:-1:exon
subclass of: SO_0000010

103535836
type: Gene
SIO_000068: ncbigene

position:751983:-1
position: 751983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759018:-1
position: 759018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751983-759018:-1:exon

RFC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RFC2
product: replication factor C subunit 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 9 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030462533.1
SIO_010081: RFC2
subclass of: SO_0000673
so part of: RFC2
location: complement(join(751983..752294,752929..753042,753350..753430,753915..753980,754302..754459,755135..755235,755568..755672,756734..756838,757197..757238,757874..757943,758860..759018))
location: region:751983-759018:-1
so has part: feature:758860-759018:-1:exon
so has part: feature:757874-757943:-1:exon
so has part: feature:757197-757238:-1:exon
so has part: feature:756734-756838:-1:exon
so has part: feature:755568-755672:-1:exon
so has part: feature:755135-755235:-1:exon
so has part: feature:754302-754459:-1:exon
so has part: feature:753915-753980:-1:exon
so has part: feature:753350-753430:-1:exon
so has part: feature:752929-753042:-1:exon
so has part: feature:751983-752294:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:758860-759018:-1:exon

position:758860:-1
position: 758860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:757874-757943:-1:exon

position:757874:-1
position: 757874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:757943:-1
position: 757943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:757197-757238:-1:exon

position:757197:-1
position: 757197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:757238:-1
position: 757238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:756734-756838:-1:exon

position:756734:-1
position: 756734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:756838:-1
position: 756838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:755568-755672:-1:exon

position:755568:-1
position: 755568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:755672:-1
position: 755672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:755135-755235:-1:exon

position:755135:-1
position: 755135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:755235:-1
position: 755235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:754302-754459:-1:exon

position:754302:-1
position: 754302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:754459:-1
position: 754459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:753915-753980:-1:exon

position:753915:-1
position: 753915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:753980:-1
position: 753980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:753350-753430:-1:exon

position:753350:-1
position: 753350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:753430:-1
position: 753430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:752929-753042:-1:exon

position:752929:-1
position: 752929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:753042:-1
position: 753042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:751983-752294:-1:exon

position:752294:-1
position: 752294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RFC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RFC2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: replication factor C subunit 2
translation: MEMEVEEEEKAGPATGEKRGTAEPQGSGSAAGGHYELPWVEKYRPLKLCEIVGNEDTVSRLEVFAKEGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDSQILARLLKIVEKEDVPYTDDGLEAIIFTAQGDMRQALNNLQSTYSGFGFINSENVFKVCDEPHPLLVKEMLQHCINANIDEAYKILAHLWRLGYSPEDVIGNIFRVCKTFQMPEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTAAPAAS
SIO_010081: RFC2
subclass of: SO_0000673
so part of: RFC2
location: complement(join(752184..752294,752929..753042,753350..753430,753915..753980,754302..754459,755135..755235,755568..755672,756734..756838,757197..757238,757874..757943,758860..758975))
location: region:752184-758975:-1
so has part: feature:758860-758975:-1:exon
so has part: feature:757874-757943:-1:exon
so has part: feature:757197-757238:-1:exon
so has part: feature:756734-756838:-1:exon
so has part: feature:755568-755672:-1:exon
so has part: feature:755135-755235:-1:exon
so has part: feature:754302-754459:-1:exon
so has part: feature:753915-753980:-1:exon
so has part: feature:753350-753430:-1:exon
so has part: feature:752929-753042:-1:exon
so has part: feature:752184-752294:-1:exon

XP_030318393.1
type: Protein
SIO_000068: ncbiprotein

position:752184:-1
position: 752184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758975:-1
position: 758975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:758860-758975:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:757874-757943:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:757197-757238:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:756734-756838:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:755568-755672:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:755135-755235:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:754302-754459:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:753915-753980:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:753350-753430:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:752929-753042:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:752184-752294:-1:exon

AUTS2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: AUTS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(766722..793574)
location: region:766722-793574:-1
so has part: feature:766722-793574:-1:exon
subclass of: SO_0000010

103535837
type: Gene
SIO_000068: ncbigene

position:766722:-1
position: 766722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:793574:-1
position: 793574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:766722-793574:-1:exon

AUTS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: AUTS2
product: activator of transcription and developmental regulator AUTS2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 20 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030462558.1
SIO_010081: AUTS2
subclass of: SO_0000673
so part of: AUTS2
location: complement(join(766722..769886,774180..774402,775306..775389,776804..776881,777372..777513,781492..781563,783077..783106,784733..784804,786095..786190,790136..790180,790645..790865,791743..791996,793472..793574))
location: region:766722-793574:-1
so has part: feature:793472-793574:-1:exon
so has part: feature:791743-791996:-1:exon
so has part: feature:790645-790865:-1:exon
so has part: feature:790136-790180:-1:exon
so has part: feature:786095-786190:-1:exon
so has part: feature:784733-784804:-1:exon
so has part: feature:783077-783106:-1:exon
so has part: feature:781492-781563:-1:exon
so has part: feature:777372-777513:-1:exon
so has part: feature:776804-776881:-1:exon
so has part: feature:775306-775389:-1:exon
so has part: feature:774180-774402:-1:exon
so has part: feature:766722-769886:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:793472-793574:-1:exon

position:793472:-1
position: 793472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:791743-791996:-1:exon

position:791743:-1
position: 791743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:791996:-1
position: 791996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:790645-790865:-1:exon

position:790645:-1
position: 790645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790865:-1
position: 790865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:790136-790180:-1:exon

position:790136:-1
position: 790136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790180:-1
position: 790180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:786095-786190:-1:exon

position:786095:-1
position: 786095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:786190:-1
position: 786190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:784733-784804:-1:exon

position:784733:-1
position: 784733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:784804:-1
position: 784804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:783077-783106:-1:exon

position:783077:-1
position: 783077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:783106:-1
position: 783106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:781492-781563:-1:exon

position:781492:-1
position: 781492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:781563:-1
position: 781563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:777372-777513:-1:exon

position:777372:-1
position: 777372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777513:-1
position: 777513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:776804-776881:-1:exon

position:776804:-1
position: 776804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:776881:-1
position: 776881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:775306-775389:-1:exon

position:775306:-1
position: 775306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775389:-1
position: 775389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:774180-774402:-1:exon

position:774180:-1
position: 774180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:774402:-1
position: 774402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:766722-769886:-1:exon

position:769886:-1
position: 769886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AUTS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: AUTS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autism susceptibility gene 2 protein
translation: MFAPPTALPPPPPLTSGTLQVPGHPAGSTYSEQDLLRQELNTRFLASQSADRGASLGPPPYLRTEFHQHQHQHQHTHQHTHQHTFTPFPHAIPPTAIMPTPAPPMFDKYPTKVDPFYRHSLFHSYPPAVSGIPPMIPPTGPFGSLQGAFQPKTSNPIDVAARPGTVPHTLLQKDPRLTDPFRPMLRKPGKWCAMHVHIAWQIYHHQQKVKKQMQSDPHKLDFGLKPEFLSRPPGPSLFGAIHHPHDLARPSTLFSTASGGHPAGTPFGPPPHHSNFLNPAAHLEPFNRPASFSGLTAVGSNAFGGLGNPTVTPNSMFGHKDGPSMQSFSNPHEPWNRLHRTPPSFPTPPPWLKPGELERSSSAAAHDRDRDVDKRDSSLSKDDKERESIEKRHSSHPSPAPIHPVNSLGHNRSSNEQIRSHLNPEAREKEKPKERERDHSESRKEINVEEHKVKDNYISEKEGLSHESRVVEESKQMSRVPSPYARPPVVESTRPNSTSNREVERKSEPAYDNPKKSSEVKVKEERKEDHDVQPEGPQTHRSSDQPPPVSTSNVHPSPLVSMPMTVGVTGIHHMNSISGLDRTRMMTPFMGISPIPGGERFPYPSFHWDPMRDPLRDPYRELDIHRRDPLGRDFLLRNDPLHRLSAPRLYEADRSFRDREPHDYNHHHHHHHPLSVDPRREHERGNHLDDRERLHMLREDYEHARLHSVHPAALDGHLPHPSLITPGLPSMHYPRVSPPTGHQNGILNKTPPTAALSAPPPLISTLGPRPGSPRRTTPLSTEMRERPPSHTLKDIEAR
SIO_010081: AUTS2
subclass of: SO_0000673
so part of: AUTS2
location: complement(join(768647..769886,774180..774402,775306..775389,776804..776881,777372..777513,781492..781563,783077..783106,784733..784804,786095..786190,790136..790180,790645..790865,791743..791836))
location: region:768647-791836:-1
so has part: feature:791743-791836:-1:exon
so has part: feature:790645-790865:-1:exon
so has part: feature:790136-790180:-1:exon
so has part: feature:786095-786190:-1:exon
so has part: feature:784733-784804:-1:exon
so has part: feature:783077-783106:-1:exon
so has part: feature:781492-781563:-1:exon
so has part: feature:777372-777513:-1:exon
so has part: feature:776804-776881:-1:exon
so has part: feature:775306-775389:-1:exon
so has part: feature:774180-774402:-1:exon
so has part: feature:768647-769886:-1:exon

XP_030318418.1
type: Protein
SIO_000068: ncbiprotein

position:768647:-1
position: 768647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:791836:-1
position: 791836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:791743-791836:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:790645-790865:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:790136-790180:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:786095-786190:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:784733-784804:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:783077-783106:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:781492-781563:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:777372-777513:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:776804-776881:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:775306-775389:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:774180-774402:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:768647-769886:-1:exon

LOC115599383
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599383
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1168977..1512594)
location: region:1168977-1512594:-1
so has part: feature:1168977-1512594:-1:exon
subclass of: SO_0000010

115599383
type: Gene
SIO_000068: ncbigene

position:1168977:-1
position: 1168977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1512594:-1
position: 1512594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1168977-1512594:-1:exon

LOC115599383
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC115599383
product: autism susceptibility gene 2 protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 50% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030462660.1
SIO_010081: LOC115599383
subclass of: SO_0000673
so part of: LOC115599383
location: complement(join(1168977..1169033,1177197..1177298,1313847..1314053,1512301..1512594))
location: region:1168977-1512594:-1
so has part: feature:1512301-1512594:-1:exon
so has part: feature:1313847-1314053:-1:exon
so has part: feature:1177197-1177298:-1:exon
so has part: feature:1168977-1169033:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1512301-1512594:-1:exon

position:1512301:-1
position: 1512301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1313847-1314053:-1:exon

position:1313847:-1
position: 1313847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1314053:-1
position: 1314053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1177197-1177298:-1:exon

position:1177197:-1
position: 1177197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1177298:-1
position: 1177298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1168977-1169033:-1:exon

position:1169033:-1
position: 1169033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115599383
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC115599383
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autism susceptibility gene 2 protein-like
translation: MDGPARCNGLRKKRRSRSQRDRERRAKGGRRGSATGGAAGPGAASALSSSGSEKEDNGPPPPSRPRPPRRKRRESSSAEEDIIDGFAMSSFVTFEALEKDVALKPQERVEKRQNPLAKKKREALTNGLSYLPKKNRLHHQYSSDRENDRNLCQHLGKRKKIPKGLRQLKPGQNSCRDSDSESASGESKGFQRSSSRERLSDSSAPSSLGTGYFVSVSQL
SIO_010081: LOC115599383
subclass of: SO_0000673
so part of: LOC115599383
location: complement(join(1168977..1169033,1177197..1177298,1313847..1314053,1512301..1512594))
location: region:1168977-1512594:-1
so has part: feature:1512301-1512594:-1:exon
so has part: feature:1313847-1314053:-1:exon
so has part: feature:1177197-1177298:-1:exon
so has part: feature:1168977-1169033:-1:exon

XP_030318520.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1512301-1512594:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1313847-1314053:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1177197-1177298:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1168977-1169033:-1:exon

CASTOR2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: CASTOR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2071224..2190259
location: region:2071224-2190259:1
so has part: feature:2071224-2190259:1:exon
subclass of: SO_0000010

103535814
type: Gene
SIO_000068: ncbigene

position:2071224:1
position: 2071224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2190259:1
position: 2190259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2071224-2190259:1:exon

CASTOR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CASTOR2
product: cytosolic arginine sensor for mTORC1 subunit 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 8 ESTs, 2 long SRA reads, 12 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_008501915.2
SIO_010081: CASTOR2
subclass of: SO_0000673
so part of: CASTOR2
location: join(2071224..2071729,2132463..2132533,2173018..2173211,2174016..2174148,2175214..2175337,2175913..2176023,2177282..2177364,2178751..2178845,2183507..2190259)
location: region:2071224-2190259:1
so has part: feature:2071224-2071729:1:exon
so has part: feature:2132463-2132533:1:exon
so has part: feature:2173018-2173211:1:exon
so has part: feature:2174016-2174148:1:exon
so has part: feature:2175214-2175337:1:exon
so has part: feature:2175913-2176023:1:exon
so has part: feature:2177282-2177364:1:exon
so has part: feature:2178751-2178845:1:exon
so has part: feature:2183507-2190259:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2071224-2071729:1:exon

position:2071729:1
position: 2071729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2132463-2132533:1:exon

position:2132463:1
position: 2132463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2132533:1
position: 2132533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2173018-2173211:1:exon

position:2173018:1
position: 2173018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2173211:1
position: 2173211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2174016-2174148:1:exon

position:2174016:1
position: 2174016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2174148:1
position: 2174148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2175214-2175337:1:exon

position:2175214:1
position: 2175214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2175337:1
position: 2175337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2175913-2176023:1:exon

position:2175913:1
position: 2175913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2176023:1
position: 2176023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2177282-2177364:1:exon

position:2177282:1
position: 2177282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2177364:1
position: 2177364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2178751-2178845:1:exon

position:2178751:1
position: 2178751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2178845:1
position: 2178845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2183507-2190259:1:exon

position:2183507:1
position: 2183507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CASTOR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CASTOR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic arginine sensor for mTORC1 subunit 2
translation: MELHILEHRLRVASIAKESIQLFTYGLIKLAFLSSKTRCKFFSLTETPEDYTIIVDEEGFLELPSSEHLSVADATWLALNVVSGGGGFSGSQPIGVTKIAKSVIAPLADQNISVFMLSTYQTDFILVRERDLPFVMHTLAAEFTILRVVNGETVAADDLGITNGFVKPKLVQRPVIHPLSSPSNMFCVTSLDPDTLPTVATLLMDVMFYSNGVKDSVVGNEDSGHIRFFSFSLIEGYISLVMDVQTQQRFPNNLLFTSASGELWKMVRIGGQPLGFDECGIVAQISEPLAAADIPAYYISTFKFDHALVPEENINGVVNALQVSQAEKH
SIO_010081: CASTOR2
subclass of: SO_0000673
so part of: CASTOR2
location: join(2071617..2071729,2132463..2132533,2173018..2173211,2174016..2174148,2175214..2175337,2175913..2176023,2177282..2177364,2178751..2178845,2183507..2183572)
location: region:2071617-2183572:1
so has part: feature:2071617-2071729:1:exon
so has part: feature:2132463-2132533:1:exon
so has part: feature:2173018-2173211:1:exon
so has part: feature:2174016-2174148:1:exon
so has part: feature:2175214-2175337:1:exon
so has part: feature:2175913-2176023:1:exon
so has part: feature:2177282-2177364:1:exon
so has part: feature:2178751-2178845:1:exon
so has part: feature:2183507-2183572:1:exon

XP_008500137.1
type: Protein
SIO_000068: ncbiprotein

position:2071617:1
position: 2071617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2183572:1
position: 2183572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2071617-2071729:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2132463-2132533:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2173018-2173211:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2174016-2174148:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2175214-2175337:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2175913-2176023:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2177282-2177364:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2178751-2178845:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2183507-2183572:1:exon

RCC1L
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: RCC1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2194159..2212185)
location: region:2194159-2212185:-1
so has part: feature:2194159-2212185:-1:exon
subclass of: SO_0000010

103535838
type: Gene
SIO_000068: ncbigene

position:2194159:-1
position: 2194159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2212185:-1
position: 2212185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2194159-2212185:-1:exon

RCC1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RCC1L
product: RCC1 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 1 long SRA read, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_008501943.2
SIO_010081: RCC1L
subclass of: SO_0000673
so part of: RCC1L
location: complement(join(2194159..2195519,2197038..2197123,2198786..2198959,2199962..2200046,2201432..2201613,2202296..2202380,2204678..2204729,2205809..2205875,2206874..2207002,2210057..2210186,2211844..2212185))
location: region:2194159-2212185:-1
so has part: feature:2211844-2212185:-1:exon
so has part: feature:2210057-2210186:-1:exon
so has part: feature:2206874-2207002:-1:exon
so has part: feature:2205809-2205875:-1:exon
so has part: feature:2204678-2204729:-1:exon
so has part: feature:2202296-2202380:-1:exon
so has part: feature:2201432-2201613:-1:exon
so has part: feature:2199962-2200046:-1:exon
so has part: feature:2198786-2198959:-1:exon
so has part: feature:2197038-2197123:-1:exon
so has part: feature:2194159-2195519:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2211844-2212185:-1:exon

position:2211844:-1
position: 2211844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2210057-2210186:-1:exon

position:2210057:-1
position: 2210057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2210186:-1
position: 2210186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2206874-2207002:-1:exon

position:2206874:-1
position: 2206874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2207002:-1
position: 2207002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2205809-2205875:-1:exon

position:2205809:-1
position: 2205809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2205875:-1
position: 2205875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2204678-2204729:-1:exon

position:2204678:-1
position: 2204678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2204729:-1
position: 2204729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2202296-2202380:-1:exon

position:2202296:-1
position: 2202296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2202380:-1
position: 2202380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2201432-2201613:-1:exon

position:2201432:-1
position: 2201432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2201613:-1
position: 2201613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2199962-2200046:-1:exon

position:2199962:-1
position: 2199962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2200046:-1
position: 2200046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2198786-2198959:-1:exon

position:2198786:-1
position: 2198786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2198959:-1
position: 2198959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2197038-2197123:-1:exon

position:2197038:-1
position: 2197038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2197123:-1
position: 2197123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2194159-2195519:-1:exon

position:2195519:-1
position: 2195519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RCC1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RCC1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RCC1-like G exchanging factor-like protein
translation: MWPLLRAPRRPPPAPRRALSKPAGPRSFRQVKEAEETAPIFQYVGKAAKRKDRVFVWGFCYSGALGIPSFVKPDVGWKNPRRIQSTPYRLETVEKISSAACGYGFTLLSSKTPDIIKVWGMGLNKDSQLGFQRSRRDRTKGYEYVLEPSPIPLPLEKPQQTRVLQVSCGRAHSLVLTDREGVFTMGNNSYGQCGRKVVEDETYSESHLIHQLNEFDSRVVQVVCGQDHSLFRTQKGSVYACGWGADGQTGLGHYNITSVPTKLRGDIAGVNIIQVSSYGDCCLAVSDEGDVFGWGNSEYLQLASVTETTQVNVPRHLPFKIGKIKEAACGGTGNLVLTEEGNVFVWGYGILGKGPNLLETAVPEMIPPNLFGSSDLSPDARVAHVRCGLSHFAALTNRGELFVWGKNLRGCLGTGRKEDQYFPWRVTVPGEVVDVACGVDHMVSMVKSFT
SIO_010081: RCC1L
subclass of: SO_0000673
so part of: RCC1L
location: complement(join(2195442..2195519,2197038..2197123,2198786..2198959,2199962..2200046,2201432..2201613,2202296..2202380,2204678..2204729,2205809..2205875,2206874..2207002,2210057..2210186,2211844..2212128))
location: region:2195442-2212128:-1
so has part: feature:2211844-2212128:-1:exon
so has part: feature:2210057-2210186:-1:exon
so has part: feature:2206874-2207002:-1:exon
so has part: feature:2205809-2205875:-1:exon
so has part: feature:2204678-2204729:-1:exon
so has part: feature:2202296-2202380:-1:exon
so has part: feature:2201432-2201613:-1:exon
so has part: feature:2199962-2200046:-1:exon
so has part: feature:2198786-2198959:-1:exon
so has part: feature:2197038-2197123:-1:exon
so has part: feature:2195442-2195519:-1:exon

XP_008500165.1
type: Protein
SIO_000068: ncbiprotein

position:2195442:-1
position: 2195442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2212128:-1
position: 2212128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2211844-2212128:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2210057-2210186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2206874-2207002:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2205809-2205875:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2204678-2204729:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2202296-2202380:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2201432-2201613:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2199962-2200046:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2198786-2198959:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2197038-2197123:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2195442-2195519:-1:exon

NCF1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: NCF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2212938..2221639)
location: region:2212938-2221639:-1
so has part: feature:2212938-2221639:-1:exon
subclass of: SO_0000010

103535815
type: Gene
SIO_000068: ncbigene

position:2212938:-1
position: 2212938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2221639:-1
position: 2221639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2212938-2221639:-1:exon

NCF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NCF1
product: neutrophil cytosolic factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_008501916.2
SIO_010081: NCF1
subclass of: SO_0000673
so part of: NCF1
location: complement(join(2212938..2213371,2213887..2214029,2216186..2216293,2217174..2217291,2218205..2218312,2219117..2219239,2219544..2219599,2219698..2219863,2220683..2220758,2221061..2221141,2221499..2221639))
location: region:2212938-2221639:-1
so has part: feature:2221499-2221639:-1:exon
so has part: feature:2221061-2221141:-1:exon
so has part: feature:2220683-2220758:-1:exon
so has part: feature:2219698-2219863:-1:exon
so has part: feature:2219544-2219599:-1:exon
so has part: feature:2219117-2219239:-1:exon
so has part: feature:2218205-2218312:-1:exon
so has part: feature:2217174-2217291:-1:exon
so has part: feature:2216186-2216293:-1:exon
so has part: feature:2213887-2214029:-1:exon
so has part: feature:2212938-2213371:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2221499-2221639:-1:exon

position:2221499:-1
position: 2221499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2221061-2221141:-1:exon

position:2221061:-1
position: 2221061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2221141:-1
position: 2221141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2220683-2220758:-1:exon

position:2220683:-1
position: 2220683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2220758:-1
position: 2220758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2219698-2219863:-1:exon

position:2219698:-1
position: 2219698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2219863:-1
position: 2219863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2219544-2219599:-1:exon

position:2219544:-1
position: 2219544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2219599:-1
position: 2219599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2219117-2219239:-1:exon

position:2219117:-1
position: 2219117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2219239:-1
position: 2219239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2218205-2218312:-1:exon

position:2218205:-1
position: 2218205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2218312:-1
position: 2218312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2217174-2217291:-1:exon

position:2217174:-1
position: 2217174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2217291:-1
position: 2217291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2216186-2216293:-1:exon

position:2216186:-1
position: 2216186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2216293:-1
position: 2216293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2213887-2214029:-1:exon

position:2213887:-1
position: 2213887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2214029:-1
position: 2214029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2212938-2213371:-1:exon

position:2213371:-1
position: 2213371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NCF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NCF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neutrophil cytosol factor 1
translation: MGDTFIRHIELLGYEKRFFPSQHYVYMFLVKWNDLSEKLIYRRFTEIYEFHKALKEMFPIESGDINVESRIIPHLPAPKWFDGQRSTQNRQGTLSEYCSTLLNLPHKISRCLHVVNFFQVRPEDMNPVTDSWIKKPEVFLLPKDAKKTLSDITGPIILQTYRAIADYEKSSTSEMALKAGDMVDVVEKSESGWWFCQLKNKQGWVPAAYLEPMDGPDESEEQEPNYAGEQYLVQKSYRAVEEDELTLQDGDTIEVIHKLLDGWWVVRKDENTGYYPSMYLQKAGEENSPGKSELRNRRAPPRRSSIRNAKSIHKQGRRQISQETYRRNSRRYIQSQRNRRGNFQNKADVIMEKNEEEESKPKAQPAVPPRPSKDLILTRCTESTRRKIL
SIO_010081: NCF1
subclass of: SO_0000673
so part of: NCF1
location: complement(join(2213253..2213371,2213887..2214029,2216186..2216293,2217174..2217291,2218205..2218312,2219117..2219239,2219544..2219599,2219698..2219863,2220683..2220758,2221061..2221141,2221499..2221570))
location: region:2213253-2221570:-1
so has part: feature:2221499-2221570:-1:exon
so has part: feature:2221061-2221141:-1:exon
so has part: feature:2220683-2220758:-1:exon
so has part: feature:2219698-2219863:-1:exon
so has part: feature:2219544-2219599:-1:exon
so has part: feature:2219117-2219239:-1:exon
so has part: feature:2218205-2218312:-1:exon
so has part: feature:2217174-2217291:-1:exon
so has part: feature:2216186-2216293:-1:exon
so has part: feature:2213887-2214029:-1:exon
so has part: feature:2213253-2213371:-1:exon

XP_008500138.2
type: Protein
SIO_000068: ncbiprotein

position:2213253:-1
position: 2213253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2221570:-1
position: 2221570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2221499-2221570:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2221061-2221141:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2220683-2220758:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2219698-2219863:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2219544-2219599:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2219117-2219239:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2218205-2218312:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2217174-2217291:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2216186-2216293:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2213887-2214029:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2213253-2213371:-1:exon

GTF2I
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: GTF2I
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2224117..2299811)
location: region:2224117-2299811:-1
so has part: feature:2224117-2299811:-1:exon
subclass of: SO_0000010

103535839
type: Gene
SIO_000068: ncbigene

position:2224117:-1
position: 2224117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2299811:-1
position: 2299811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2224117-2299811:-1:exon

GTF2I
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: GTF2I
product: general transcription factor IIi, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030462486.1
SIO_010081: GTF2I
subclass of: SO_0000673
so part of: GTF2I
location: complement(join(2224117..2226518,2228669..2228743,2233970..2233998,2235360..2235543,2236293..2236376,2237420..2237533,2238384..2238436,2238995..2239178,2239999..2240064,2242389..2242481,2242979..2243056,2243657..2243715,2244226..2244409,2244916..2244987,2246067..2246125,2246512..2246695,2247936..2248025,2253972..2254030,2255897..2256080,2257337..2257402,2259302..2259406,2260895..2260957,2262426..2262482,2263194..2263247,2265653..2265718,2270109..2270183,2272028..2272068,2272785..2272833,2273945..2273973,2274170..2274353,2274588..2274713,2284867..2285005,2286314..2286419,2298955..2299240))
location: region:2224117-2299240:-1
so has part: feature:2298955-2299240:-1:exon
so has part: feature:2286314-2286419:-1:exon
so has part: feature:2284867-2285005:-1:exon
so has part: feature:2274588-2274713:-1:exon
so has part: feature:2274170-2274353:-1:exon
so has part: feature:2273945-2273973:-1:exon
so has part: feature:2272785-2272833:-1:exon
so has part: feature:2272028-2272068:-1:exon
so has part: feature:2270109-2270183:-1:exon
so has part: feature:2265653-2265718:-1:exon
so has part: feature:2263194-2263247:-1:exon
so has part: feature:2262426-2262482:-1:exon
so has part: feature:2260895-2260957:-1:exon
so has part: feature:2259302-2259406:-1:exon
so has part: feature:2257337-2257402:-1:exon
so has part: feature:2255897-2256080:-1:exon
so has part: feature:2253972-2254030:-1:exon
so has part: feature:2247936-2248025:-1:exon
so has part: feature:2246512-2246695:-1:exon
so has part: feature:2246067-2246125:-1:exon
so has part: feature:2244916-2244987:-1:exon
so has part: feature:2244226-2244409:-1:exon
so has part: feature:2243657-2243715:-1:exon
so has part: feature:2242979-2243056:-1:exon
so has part: feature:2242389-2242481:-1:exon
so has part: feature:2239999-2240064:-1:exon
so has part: feature:2238995-2239178:-1:exon
so has part: feature:2238384-2238436:-1:exon
so has part: feature:2237420-2237533:-1:exon
so has part: feature:2236293-2236376:-1:exon
so has part: feature:2235360-2235543:-1:exon
so has part: feature:2233970-2233998:-1:exon
so has part: feature:2228669-2228743:-1:exon
so has part: feature:2224117-2226518:-1:exon

position:2299240:-1
position: 2299240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2298955-2299240:-1:exon

position:2298955:-1
position: 2298955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2286314-2286419:-1:exon

position:2286314:-1
position: 2286314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2286419:-1
position: 2286419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2284867-2285005:-1:exon

position:2284867:-1
position: 2284867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2285005:-1
position: 2285005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2274588-2274713:-1:exon

position:2274588:-1
position: 2274588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2274713:-1
position: 2274713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2274170-2274353:-1:exon

position:2274170:-1
position: 2274170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2274353:-1
position: 2274353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2273945-2273973:-1:exon

position:2273945:-1
position: 2273945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2273973:-1
position: 2273973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2272785-2272833:-1:exon

position:2272785:-1
position: 2272785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2272833:-1
position: 2272833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2272028-2272068:-1:exon

position:2272028:-1
position: 2272028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2272068:-1
position: 2272068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2270109-2270183:-1:exon

position:2270109:-1
position: 2270109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2270183:-1
position: 2270183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2265653-2265718:-1:exon

position:2265653:-1
position: 2265653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2265718:-1
position: 2265718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2263194-2263247:-1:exon

position:2263194:-1
position: 2263194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2263247:-1
position: 2263247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2262426-2262482:-1:exon

position:2262426:-1
position: 2262426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2262482:-1
position: 2262482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2260895-2260957:-1:exon

position:2260895:-1
position: 2260895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2260957:-1
position: 2260957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2259302-2259406:-1:exon

position:2259302:-1
position: 2259302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2259406:-1
position: 2259406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2257337-2257402:-1:exon

position:2257337:-1
position: 2257337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2257402:-1
position: 2257402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2255897-2256080:-1:exon

position:2255897:-1
position: 2255897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2256080:-1
position: 2256080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2253972-2254030:-1:exon

position:2253972:-1
position: 2253972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2254030:-1
position: 2254030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2247936-2248025:-1:exon

position:2247936:-1
position: 2247936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2248025:-1
position: 2248025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2246512-2246695:-1:exon

position:2246512:-1
position: 2246512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2246695:-1
position: 2246695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2246067-2246125:-1:exon

position:2246067:-1
position: 2246067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2246125:-1
position: 2246125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2244916-2244987:-1:exon

position:2244916:-1
position: 2244916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2244987:-1
position: 2244987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2244226-2244409:-1:exon

position:2244226:-1
position: 2244226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2244409:-1
position: 2244409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2243657-2243715:-1:exon

position:2243657:-1
position: 2243657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2243715:-1
position: 2243715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2242979-2243056:-1:exon

position:2242979:-1
position: 2242979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2243056:-1
position: 2243056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2242389-2242481:-1:exon

position:2242389:-1
position: 2242389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2242481:-1
position: 2242481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2239999-2240064:-1:exon

position:2239999:-1
position: 2239999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2240064:-1
position: 2240064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2238995-2239178:-1:exon

position:2238995:-1
position: 2238995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2239178:-1
position: 2239178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2238384-2238436:-1:exon

position:2238384:-1
position: 2238384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2238436:-1
position: 2238436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2237420-2237533:-1:exon

position:2237420:-1
position: 2237420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2237533:-1
position: 2237533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2236293-2236376:-1:exon

position:2236293:-1
position: 2236293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2236376:-1
position: 2236376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2235360-2235543:-1:exon

position:2235360:-1
position: 2235360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2235543:-1
position: 2235543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:2233970-2233998:-1:exon

position:2233970:-1
position: 2233970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2233998:-1
position: 2233998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:2228669-2228743:-1:exon

position:2228669:-1
position: 2228669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2228743:-1
position: 2228743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:2224117-2226518:-1:exon

position:2226518:-1
position: 2226518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GTF2I
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: GTF2I
product: general transcription factor IIi, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030462485.1
SIO_010081: GTF2I
subclass of: SO_0000673
so part of: GTF2I
location: complement(join(2224124..2226518,2228669..2228743,2233970..2233998,2235360..2235543,2236293..2236376,2237420..2237533,2238384..2238436,2238995..2239178,2239999..2240064,2242389..2242481,2242979..2243056,2243657..2243715,2244226..2244409,2244916..2244987,2246067..2246125,2246512..2246695,2247936..2248025,2253972..2254030,2255897..2256080,2257337..2257402,2259302..2259406,2260895..2260957,2262426..2262482,2263194..2263247,2265653..2265718,2270109..2270183,2272028..2272068,2272785..2272833,2273945..2273973,2274170..2274353,2274588..2274713,2284867..2285005,2286314..2286419,2299654..2299811))
location: region:2224124-2299811:-1
so has part: feature:2299654-2299811:-1:exon
so has part: feature:2286314-2286419:-1:exon
so has part: feature:2284867-2285005:-1:exon
so has part: feature:2274588-2274713:-1:exon
so has part: feature:2274170-2274353:-1:exon
so has part: feature:2273945-2273973:-1:exon
so has part: feature:2272785-2272833:-1:exon
so has part: feature:2272028-2272068:-1:exon
so has part: feature:2270109-2270183:-1:exon
so has part: feature:2265653-2265718:-1:exon
so has part: feature:2263194-2263247:-1:exon
so has part: feature:2262426-2262482:-1:exon
so has part: feature:2260895-2260957:-1:exon
so has part: feature:2259302-2259406:-1:exon
so has part: feature:2257337-2257402:-1:exon
so has part: feature:2255897-2256080:-1:exon
so has part: feature:2253972-2254030:-1:exon
so has part: feature:2247936-2248025:-1:exon
so has part: feature:2246512-2246695:-1:exon
so has part: feature:2246067-2246125:-1:exon
so has part: feature:2244916-2244987:-1:exon
so has part: feature:2244226-2244409:-1:exon
so has part: feature:2243657-2243715:-1:exon
so has part: feature:2242979-2243056:-1:exon
so has part: feature:2242389-2242481:-1:exon
so has part: feature:2239999-2240064:-1:exon
so has part: feature:2238995-2239178:-1:exon
so has part: feature:2238384-2238436:-1:exon
so has part: feature:2237420-2237533:-1:exon
so has part: feature:2236293-2236376:-1:exon
so has part: feature:2235360-2235543:-1:exon
so has part: feature:2233970-2233998:-1:exon
so has part: feature:2228669-2228743:-1:exon
so has part: feature:2224124-2226518:-1:exon

position:2224124:-1
position: 2224124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2299654-2299811:-1:exon

position:2299654:-1
position: 2299654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2286314-2286419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2284867-2285005:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2274588-2274713:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2274170-2274353:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2273945-2273973:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2272785-2272833:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2272028-2272068:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2270109-2270183:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2265653-2265718:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2263194-2263247:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2262426-2262482:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2260895-2260957:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2259302-2259406:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2257337-2257402:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2255897-2256080:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2253972-2254030:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2247936-2248025:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2246512-2246695:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2246067-2246125:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2244916-2244987:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2244226-2244409:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2243657-2243715:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2242979-2243056:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2242389-2242481:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2239999-2240064:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2238995-2239178:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2238384-2238436:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2237420-2237533:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2236293-2236376:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2235360-2235543:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2233970-2233998:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2228669-2228743:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2224124-2226518:-1:exon

GTF2I
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: GTF2I
product: general transcription factor IIi, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030462483.1
SIO_010081: GTF2I
subclass of: SO_0000673
so part of: GTF2I
location: complement(join(2225418..2226518,2228669..2228743,2231185..2231223,2233970..2233998,2235360..2235543,2236293..2236376,2237420..2237533,2238384..2238436,2238995..2239178,2239999..2240064,2242389..2242481,2242979..2243056,2243657..2243715,2244226..2244409,2244916..2244987,2246067..2246125,2246512..2246695,2247936..2248025,2253972..2254030,2255897..2256080,2257337..2257402,2257677..2257760,2259302..2259406,2260895..2260957,2262426..2262482,2263194..2263247,2265653..2265718,2270109..2270183,2272028..2272068,2272785..2272833,2273945..2273973,2274170..2274353,2274588..2274713,2284867..2285005,2286314..2286419,2299654..2299811))
location: region:2225418-2299811:-1
so has part: feature:2299654-2299811:-1:exon
so has part: feature:2286314-2286419:-1:exon
so has part: feature:2284867-2285005:-1:exon
so has part: feature:2274588-2274713:-1:exon
so has part: feature:2274170-2274353:-1:exon
so has part: feature:2273945-2273973:-1:exon
so has part: feature:2272785-2272833:-1:exon
so has part: feature:2272028-2272068:-1:exon
so has part: feature:2270109-2270183:-1:exon
so has part: feature:2265653-2265718:-1:exon
so has part: feature:2263194-2263247:-1:exon
so has part: feature:2262426-2262482:-1:exon
so has part: feature:2260895-2260957:-1:exon
so has part: feature:2259302-2259406:-1:exon
so has part: feature:2257677-2257760:-1:exon
so has part: feature:2257337-2257402:-1:exon
so has part: feature:2255897-2256080:-1:exon
so has part: feature:2253972-2254030:-1:exon
so has part: feature:2247936-2248025:-1:exon
so has part: feature:2246512-2246695:-1:exon
so has part: feature:2246067-2246125:-1:exon
so has part: feature:2244916-2244987:-1:exon
so has part: feature:2244226-2244409:-1:exon
so has part: feature:2243657-2243715:-1:exon
so has part: feature:2242979-2243056:-1:exon
so has part: feature:2242389-2242481:-1:exon
so has part: feature:2239999-2240064:-1:exon
so has part: feature:2238995-2239178:-1:exon
so has part: feature:2238384-2238436:-1:exon
so has part: feature:2237420-2237533:-1:exon
so has part: feature:2236293-2236376:-1:exon
so has part: feature:2235360-2235543:-1:exon
so has part: feature:2233970-2233998:-1:exon
so has part: feature:2231185-2231223:-1:exon
so has part: feature:2228669-2228743:-1:exon
so has part: feature:2225418-2226518:-1:exon

position:2225418:-1
position: 2225418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2299654-2299811:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2286314-2286419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2284867-2285005:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2274588-2274713:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2274170-2274353:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2273945-2273973:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2272785-2272833:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2272028-2272068:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2270109-2270183:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2265653-2265718:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2263194-2263247:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2262426-2262482:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2260895-2260957:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2259302-2259406:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2257677-2257760:-1:exon

position:2257677:-1
position: 2257677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2257760:-1
position: 2257760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2257337-2257402:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2255897-2256080:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2253972-2254030:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2247936-2248025:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2246512-2246695:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2246067-2246125:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2244916-2244987:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2244226-2244409:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2243657-2243715:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2242979-2243056:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2242389-2242481:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2239999-2240064:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2238995-2239178:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2238384-2238436:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2237420-2237533:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2236293-2236376:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2235360-2235543:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2233970-2233998:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2231185-2231223:-1:exon

position:2231185:-1
position: 2231185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2231223:-1
position: 2231223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:2228669-2228743:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2225418-2226518:-1:exon

GTF2I
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: GTF2I
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription factor II-I isoform X2
translation: MAQTATSAAPIYDEDTTESRMVITFLMSALESMCKELAKAKAEVACIAVYERNVFAVGTERGKGFINSRKDFQKDFVKFCVKEEEEGNKPKALQPANRLTVDIVELEALRKSVEDYFSYCYGKALGKSTVVPVPYEEIQRDQSAVVVLGLPKGLEFKHPENYNSSTLKWILENKSGISFIIKRPFLKPKEQLGAQMPDPSHSAIPPDQSCLPTQVKTEPKDPELILEAPVLVKKELGAPNSCQYSASGFIGSKDQGIVSFVLNSRSCKPQPSETSERGENTQEKSSTGSHQRSDSKEDTDVETSIEDSSHYTPSETSEDPEVEVTLEDDDDEYIPPNKKLRSKESADKAANRRTRKVRDFNFDNWNARVTKLRNQVEELFEKKYAQAINAKGPVSVPYPLFQAHKEELYVEGLPDGIPFRRPSMYGIPRLERILLAQEEIHFVIKKHELLNSTQEEVPLDKAVAEVSPSNTGKKDWHSRIAKLRKTVDELFCKKFAEALGSTEPKTVPYRKFEAHPTELYVEGMPENIPFRSPYWYGIPRLEKIIEVGKRIKFVIKRPELLTVSSPEVILPKLNTPVKEDWNVRITKLRKQVEEIFNMKFAEALGLSEAVKVPYPVFESNPEHLYVEGLPEGIPFRSPTWFGIPRLERIVWDSGKIKFVVKKPELVTSFLPPELASKINTKAVSPKSSKGLENPADNSKVPEDEDTEGPNKPQAEDQTNSQTNESNVNWRIRGKEFSFDAWNARITELKQKVENLFEEKCGEALGLTKPVQVPFALLESHPDVFYMEGLPEGVPFRRPSTFGIPRLEKILSNKSRLKLIIKKPEIFKAAVNAKSARSPQRKTNSSNAANTTANTPTTTLVSTAGGVTDLNIIEVTVPDGESEQLSKEENARHLREQVNDLFSRKLGEAIGMNSPVKVPYRKISAHPGCVVVDGLPSGVDFKAPSYLELSTMRKILASADCIKFNLIRPFPGSVLNNGTTETEQSPQLNQESGPTWKTSAILVRSFQS
SIO_010081: GTF2I
subclass of: SO_0000673
so part of: GTF2I
location: complement(join(2226499..2226518,2228669..2228743,2233970..2233998,2235360..2235543,2236293..2236376,2237420..2237533,2238384..2238436,2238995..2239178,2239999..2240064,2242389..2242481,2242979..2243056,2243657..2243715,2244226..2244409,2244916..2244987,2246067..2246125,2246512..2246695,2247936..2248025,2253972..2254030,2255897..2256080,2257337..2257402,2259302..2259406,2260895..2260957,2262426..2262482,2263194..2263247,2265653..2265718,2270109..2270183,2272028..2272068,2272785..2272833,2273945..2273973,2274170..2274353,2274588..2274713,2284867..2285005,2286314..2286412))
location: region:2226499-2286412:-1
so has part: feature:2286314-2286412:-1:exon
so has part: feature:2284867-2285005:-1:exon
so has part: feature:2274588-2274713:-1:exon
so has part: feature:2274170-2274353:-1:exon
so has part: feature:2273945-2273973:-1:exon
so has part: feature:2272785-2272833:-1:exon
so has part: feature:2272028-2272068:-1:exon
so has part: feature:2270109-2270183:-1:exon
so has part: feature:2265653-2265718:-1:exon
so has part: feature:2263194-2263247:-1:exon
so has part: feature:2262426-2262482:-1:exon
so has part: feature:2260895-2260957:-1:exon
so has part: feature:2259302-2259406:-1:exon
so has part: feature:2257337-2257402:-1:exon
so has part: feature:2255897-2256080:-1:exon
so has part: feature:2253972-2254030:-1:exon
so has part: feature:2247936-2248025:-1:exon
so has part: feature:2246512-2246695:-1:exon
so has part: feature:2246067-2246125:-1:exon
so has part: feature:2244916-2244987:-1:exon
so has part: feature:2244226-2244409:-1:exon
so has part: feature:2243657-2243715:-1:exon
so has part: feature:2242979-2243056:-1:exon
so has part: feature:2242389-2242481:-1:exon
so has part: feature:2239999-2240064:-1:exon
so has part: feature:2238995-2239178:-1:exon
so has part: feature:2238384-2238436:-1:exon
so has part: feature:2237420-2237533:-1:exon
so has part: feature:2236293-2236376:-1:exon
so has part: feature:2235360-2235543:-1:exon
so has part: feature:2233970-2233998:-1:exon
so has part: feature:2228669-2228743:-1:exon
so has part: feature:2226499-2226518:-1:exon

XP_030318345.1
type: Protein
SIO_000068: ncbiprotein

position:2226499:-1
position: 2226499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2286412:-1
position: 2286412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2286314-2286412:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2284867-2285005:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2274588-2274713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2274170-2274353:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2273945-2273973:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2272785-2272833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2272028-2272068:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2270109-2270183:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2265653-2265718:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2263194-2263247:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2262426-2262482:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2260895-2260957:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2259302-2259406:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2257337-2257402:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2255897-2256080:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2253972-2254030:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2247936-2248025:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2246512-2246695:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2246067-2246125:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2244916-2244987:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2244226-2244409:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2243657-2243715:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2242979-2243056:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2242389-2242481:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2239999-2240064:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2238995-2239178:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2238384-2238436:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2237420-2237533:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2236293-2236376:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2235360-2235543:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2233970-2233998:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2228669-2228743:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2226499-2226518:-1:exon

GTF2I
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: GTF2I
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription factor II-I isoform X2
translation: MAQTATSAAPIYDEDTTESRMVITFLMSALESMCKELAKAKAEVACIAVYERNVFAVGTERGKGFINSRKDFQKDFVKFCVKEEEEGNKPKALQPANRLTVDIVELEALRKSVEDYFSYCYGKALGKSTVVPVPYEEIQRDQSAVVVLGLPKGLEFKHPENYNSSTLKWILENKSGISFIIKRPFLKPKEQLGAQMPDPSHSAIPPDQSCLPTQVKTEPKDPELILEAPVLVKKELGAPNSCQYSASGFIGSKDQGIVSFVLNSRSCKPQPSETSERGENTQEKSSTGSHQRSDSKEDTDVETSIEDSSHYTPSETSEDPEVEVTLEDDDDEYIPPNKKLRSKESADKAANRRTRKVRDFNFDNWNARVTKLRNQVEELFEKKYAQAINAKGPVSVPYPLFQAHKEELYVEGLPDGIPFRRPSMYGIPRLERILLAQEEIHFVIKKHELLNSTQEEVPLDKAVAEVSPSNTGKKDWHSRIAKLRKTVDELFCKKFAEALGSTEPKTVPYRKFEAHPTELYVEGMPENIPFRSPYWYGIPRLEKIIEVGKRIKFVIKRPELLTVSSPEVILPKLNTPVKEDWNVRITKLRKQVEEIFNMKFAEALGLSEAVKVPYPVFESNPEHLYVEGLPEGIPFRSPTWFGIPRLERIVWDSGKIKFVVKKPELVTSFLPPELASKINTKAVSPKSSKGLENPADNSKVPEDEDTEGPNKPQAEDQTNSQTNESNVNWRIRGKEFSFDAWNARITELKQKVENLFEEKCGEALGLTKPVQVPFALLESHPDVFYMEGLPEGVPFRRPSTFGIPRLEKILSNKSRLKLIIKKPEIFKAAVNAKSARSPQRKTNSSNAANTTANTPTTTLVSTAGGVTDLNIIEVTVPDGESEQLSKEENARHLREQVNDLFSRKLGEAIGMNSPVKVPYRKISAHPGCVVVDGLPSGVDFKAPSYLELSTMRKILASADCIKFNLIRPFPGSVLNNGTTETEQSPQLNQESGPTWKTSAILVRSFQS
SIO_010081: GTF2I
subclass of: SO_0000673
so part of: GTF2I
location: complement(join(2226499..2226518,2228669..2228743,2233970..2233998,2235360..2235543,2236293..2236376,2237420..2237533,2238384..2238436,2238995..2239178,2239999..2240064,2242389..2242481,2242979..2243056,2243657..2243715,2244226..2244409,2244916..2244987,2246067..2246125,2246512..2246695,2247936..2248025,2253972..2254030,2255897..2256080,2257337..2257402,2259302..2259406,2260895..2260957,2262426..2262482,2263194..2263247,2265653..2265718,2270109..2270183,2272028..2272068,2272785..2272833,2273945..2273973,2274170..2274353,2274588..2274713,2284867..2285005,2286314..2286412))
location: region:2226499-2286412:-1
so has part: feature:2286314-2286412:-1:exon
so has part: feature:2284867-2285005:-1:exon
so has part: feature:2274588-2274713:-1:exon
so has part: feature:2274170-2274353:-1:exon
so has part: feature:2273945-2273973:-1:exon
so has part: feature:2272785-2272833:-1:exon
so has part: feature:2272028-2272068:-1:exon
so has part: feature:2270109-2270183:-1:exon
so has part: feature:2265653-2265718:-1:exon
so has part: feature:2263194-2263247:-1:exon
so has part: feature:2262426-2262482:-1:exon
so has part: feature:2260895-2260957:-1:exon
so has part: feature:2259302-2259406:-1:exon
so has part: feature:2257337-2257402:-1:exon
so has part: feature:2255897-2256080:-1:exon
so has part: feature:2253972-2254030:-1:exon
so has part: feature:2247936-2248025:-1:exon
so has part: feature:2246512-2246695:-1:exon
so has part: feature:2246067-2246125:-1:exon
so has part: feature:2244916-2244987:-1:exon
so has part: feature:2244226-2244409:-1:exon
so has part: feature:2243657-2243715:-1:exon
so has part: feature:2242979-2243056:-1:exon
so has part: feature:2242389-2242481:-1:exon
so has part: feature:2239999-2240064:-1:exon
so has part: feature:2238995-2239178:-1:exon
so has part: feature:2238384-2238436:-1:exon
so has part: feature:2237420-2237533:-1:exon
so has part: feature:2236293-2236376:-1:exon
so has part: feature:2235360-2235543:-1:exon
so has part: feature:2233970-2233998:-1:exon
so has part: feature:2228669-2228743:-1:exon
so has part: feature:2226499-2226518:-1:exon

XP_030318346.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2286314-2286412:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2284867-2285005:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2274588-2274713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2274170-2274353:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2273945-2273973:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2272785-2272833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2272028-2272068:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2270109-2270183:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2265653-2265718:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2263194-2263247:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2262426-2262482:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2260895-2260957:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2259302-2259406:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2257337-2257402:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2255897-2256080:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2253972-2254030:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2247936-2248025:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2246512-2246695:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2246067-2246125:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2244916-2244987:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2244226-2244409:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2243657-2243715:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2242979-2243056:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2242389-2242481:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2239999-2240064:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2238995-2239178:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2238384-2238436:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2237420-2237533:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2236293-2236376:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2235360-2235543:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2233970-2233998:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2228669-2228743:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2226499-2226518:-1:exon

GTF2I
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: GTF2I
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription factor II-I isoform X1
translation: MAQTATSAAPIYDEDTTESRMVITFLMSALESMCKELAKAKAEVACIAVYERNVFAVGTERGKGFINSRKDFQKDFVKFCVKEEEEGNKPKALQPANRLTVDIVELEALRKSVEDYFSYCYGKALGKSTVVPVPYEEIQRDQSAVVVLGLPKGLEFKHPENYNSSTLKWILENKSGISFIIKRPFLKPKEQLGAQMPDPSHSAIPPDQSCLPTQVKTEPKDPELILEAPVLVKKELGAPNSCQYSASGFIGSKDQGIVSFVLNSRSCKPQPSETSERGENTQEKSSTGSHQRSDSKEDTDVETSIEDSSHYTPSETSEDPEVEVTLEDDDDEYIPPNKKLRSKESADKAANRRTRKVRDFNFAPRQRTAKSNCKLTSPLISVRDADQPVKDNWNARVTKLRNQVEELFEKKYAQAINAKGPVSVPYPLFQAHKEELYVEGLPDGIPFRRPSMYGIPRLERILLAQEEIHFVIKKHELLNSTQEEVPLDKAVAEVSPSNTGKKDWHSRIAKLRKTVDELFCKKFAEALGSTEPKTVPYRKFEAHPTELYVEGMPENIPFRSPYWYGIPRLEKIIEVGKRIKFVIKRPELLTVSSPEVILPKLNTPVKEDWNVRITKLRKQVEEIFNMKFAEALGLSEAVKVPYPVFESNPEHLYVEGLPEGIPFRSPTWFGIPRLERIVWDSGKIKFVVKKPELVTSFLPPELASKINTKAVSPKSSKGLENPADNSKVPEDEDTEGPNKPQAEDQTNSQTNESNVNWRIRGKEFSFDAWNARITELKQKVENLFEEKCGEALGLTKPVQVPFALLESHPDVFYMEGLPEGVPFRRPSTFGIPRLEKILSNKSRLKLIIKKPEIFKAAVNAKSARSPQRKTNSSNAANTTANTPTTTLVSTAGGVTDLNIIEVTVPDGESEQLSKEENARHLREQVNDLFSRKLGEAIGMNSPVKVPYRKISAHPGCVVVDGLPSGVDFKAPSYLELSTMRKILASADCIKFNLIRPFPGSVLNNEPAEASHIEAPVGRTTETEQSPQLNQESGPTWKTSAILVRSFQS
SIO_010081: GTF2I
subclass of: SO_0000673
so part of: GTF2I
location: complement(join(2226499..2226518,2228669..2228743,2231185..2231223,2233970..2233998,2235360..2235543,2236293..2236376,2237420..2237533,2238384..2238436,2238995..2239178,2239999..2240064,2242389..2242481,2242979..2243056,2243657..2243715,2244226..2244409,2244916..2244987,2246067..2246125,2246512..2246695,2247936..2248025,2253972..2254030,2255897..2256080,2257337..2257402,2257677..2257760,2259302..2259406,2260895..2260957,2262426..2262482,2263194..2263247,2265653..2265718,2270109..2270183,2272028..2272068,2272785..2272833,2273945..2273973,2274170..2274353,2274588..2274713,2284867..2285005,2286314..2286412))
location: region:2226499-2286412:-1
so has part: feature:2286314-2286412:-1:exon
so has part: feature:2284867-2285005:-1:exon
so has part: feature:2274588-2274713:-1:exon
so has part: feature:2274170-2274353:-1:exon
so has part: feature:2273945-2273973:-1:exon
so has part: feature:2272785-2272833:-1:exon
so has part: feature:2272028-2272068:-1:exon
so has part: feature:2270109-2270183:-1:exon
so has part: feature:2265653-2265718:-1:exon
so has part: feature:2263194-2263247:-1:exon
so has part: feature:2262426-2262482:-1:exon
so has part: feature:2260895-2260957:-1:exon
so has part: feature:2259302-2259406:-1:exon
so has part: feature:2257677-2257760:-1:exon
so has part: feature:2257337-2257402:-1:exon
so has part: feature:2255897-2256080:-1:exon
so has part: feature:2253972-2254030:-1:exon
so has part: feature:2247936-2248025:-1:exon
so has part: feature:2246512-2246695:-1:exon
so has part: feature:2246067-2246125:-1:exon
so has part: feature:2244916-2244987:-1:exon
so has part: feature:2244226-2244409:-1:exon
so has part: feature:2243657-2243715:-1:exon
so has part: feature:2242979-2243056:-1:exon
so has part: feature:2242389-2242481:-1:exon
so has part: feature:2239999-2240064:-1:exon
so has part: feature:2238995-2239178:-1:exon
so has part: feature:2238384-2238436:-1:exon
so has part: feature:2237420-2237533:-1:exon
so has part: feature:2236293-2236376:-1:exon
so has part: feature:2235360-2235543:-1:exon
so has part: feature:2233970-2233998:-1:exon
so has part: feature:2231185-2231223:-1:exon
so has part: feature:2228669-2228743:-1:exon
so has part: feature:2226499-2226518:-1:exon

XP_030318343.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2286314-2286412:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2284867-2285005:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2274588-2274713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2274170-2274353:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2273945-2273973:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2272785-2272833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2272028-2272068:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2270109-2270183:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2265653-2265718:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2263194-2263247:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2262426-2262482:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2260895-2260957:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2259302-2259406:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2257677-2257760:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2257337-2257402:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2255897-2256080:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2253972-2254030:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2247936-2248025:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2246512-2246695:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2246067-2246125:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2244916-2244987:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2244226-2244409:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2243657-2243715:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2242979-2243056:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2242389-2242481:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2239999-2240064:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2238995-2239178:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2238384-2238436:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2237420-2237533:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2236293-2236376:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2235360-2235543:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2233970-2233998:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2231185-2231223:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2228669-2228743:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2226499-2226518:-1:exon

GTF2IRD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: GTF2IRD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2307151..2372668)
location: region:2307151-2372668:-1
so has part: feature:2307151-2372668:-1:exon
subclass of: SO_0000010

103535816
type: Gene
SIO_000068: ncbigene

position:2307151:-1
position: 2307151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2372668:-1
position: 2372668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2307151-2372668:-1:exon

GTF2IRD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: GTF2IRD1
product: GTF2I repeat domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030462395.1
SIO_010081: GTF2IRD1
subclass of: SO_0000673
so part of: GTF2IRD1
location: complement(join(2307151..2307314,2308194..2308249,2309147..2309184,2309616..2309808,2311498..2311575,2320614..2320642,2321353..2321536,2322797..2322880,2323989..2324054,2324235..2324293,2325416..2325599,2326103..2326168,2326777..2326836,2327289..2327378,2329049..2329129,2330076..2330113,2333500..2333620,2336145..2336170,2337412..2337595,2338508..2338591,2339477..2339566,2340422..2340735,2341798..2341981,2345306..2345452,2348150..2348291,2350825..2350953,2372619..2372668))
location: region:2307151-2372668:-1
so has part: feature:2372619-2372668:-1:exon
so has part: feature:2350825-2350953:-1:exon
so has part: feature:2348150-2348291:-1:exon
so has part: feature:2345306-2345452:-1:exon
so has part: feature:2341798-2341981:-1:exon
so has part: feature:2340422-2340735:-1:exon
so has part: feature:2339477-2339566:-1:exon
so has part: feature:2338508-2338591:-1:exon
so has part: feature:2337412-2337595:-1:exon
so has part: feature:2336145-2336170:-1:exon
so has part: feature:2333500-2333620:-1:exon
so has part: feature:2330076-2330113:-1:exon
so has part: feature:2329049-2329129:-1:exon
so has part: feature:2327289-2327378:-1:exon
so has part: feature:2326777-2326836:-1:exon
so has part: feature:2326103-2326168:-1:exon
so has part: feature:2325416-2325599:-1:exon
so has part: feature:2324235-2324293:-1:exon
so has part: feature:2323989-2324054:-1:exon
so has part: feature:2322797-2322880:-1:exon
so has part: feature:2321353-2321536:-1:exon
so has part: feature:2320614-2320642:-1:exon
so has part: feature:2311498-2311575:-1:exon
so has part: feature:2309616-2309808:-1:exon
so has part: feature:2309147-2309184:-1:exon
so has part: feature:2308194-2308249:-1:exon
so has part: feature:2307151-2307314:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2372619-2372668:-1:exon

position:2372619:-1
position: 2372619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2350825-2350953:-1:exon

position:2350825:-1
position: 2350825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2350953:-1
position: 2350953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2348150-2348291:-1:exon

position:2348150:-1
position: 2348150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2348291:-1
position: 2348291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2345306-2345452:-1:exon

position:2345306:-1
position: 2345306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2345452:-1
position: 2345452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2341798-2341981:-1:exon

position:2341798:-1
position: 2341798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2341981:-1
position: 2341981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2340422-2340735:-1:exon

position:2340422:-1
position: 2340422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2340735:-1
position: 2340735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2339477-2339566:-1:exon

position:2339477:-1
position: 2339477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2339566:-1
position: 2339566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2338508-2338591:-1:exon

position:2338508:-1
position: 2338508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2338591:-1
position: 2338591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2337412-2337595:-1:exon

position:2337412:-1
position: 2337412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2337595:-1
position: 2337595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2336145-2336170:-1:exon

position:2336145:-1
position: 2336145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2336170:-1
position: 2336170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2333500-2333620:-1:exon

position:2333500:-1
position: 2333500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2333620:-1
position: 2333620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2330076-2330113:-1:exon

position:2330076:-1
position: 2330076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2330113:-1
position: 2330113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2329049-2329129:-1:exon

position:2329049:-1
position: 2329049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2329129:-1
position: 2329129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2327289-2327378:-1:exon

position:2327289:-1
position: 2327289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2327378:-1
position: 2327378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2326777-2326836:-1:exon

position:2326777:-1
position: 2326777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2326836:-1
position: 2326836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2326103-2326168:-1:exon

position:2326103:-1
position: 2326103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2326168:-1
position: 2326168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2325416-2325599:-1:exon

position:2325416:-1
position: 2325416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2325599:-1
position: 2325599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2324235-2324293:-1:exon

position:2324235:-1
position: 2324235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2324293:-1
position: 2324293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2323989-2324054:-1:exon

position:2323989:-1
position: 2323989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2324054:-1
position: 2324054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2322797-2322880:-1:exon

position:2322797:-1
position: 2322797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2322880:-1
position: 2322880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2321353-2321536:-1:exon

position:2321353:-1
position: 2321353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2321536:-1
position: 2321536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2320614-2320642:-1:exon

position:2320614:-1
position: 2320614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2320642:-1
position: 2320642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2311498-2311575:-1:exon

position:2311498:-1
position: 2311498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2311575:-1
position: 2311575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2309616-2309808:-1:exon

position:2309616:-1
position: 2309616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2309808:-1
position: 2309808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2309147-2309184:-1:exon

position:2309147:-1
position: 2309147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2309184:-1
position: 2309184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2308194-2308249:-1:exon

position:2308194:-1
position: 2308194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2308249:-1
position: 2308249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2307151-2307314:-1:exon

position:2307314:-1
position: 2307314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GTF2IRD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: GTF2IRD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription factor II-I repeat domain-containing protein 1
translation: MALAGKPLDVTLGTSRADQWNMVFPQKDEIITSLVSALDSMCSALSKLNAEVACIAVHEESAFVVGTEKGRVFLSTHKELQAEFQKFCRVQQRKEQDTEVQKKAKDCGRSVLRVSSDQGSDVYLLRKMVEEVFDVLYSEAMGKSSVVPLPYERFLKEPGSLAVAGLPEGISFKKPMEYDVKSLMAILEHSHSIRFRLKRPADEPSREPNPSVDLTCTSLTSKGGRDSGANVPVAKPPGPHGQDTPSAITNFLYGVSLPTQLAVDLKQEVSSSLPAPNMAGEALLPRPAGELKVPSSQEYSDCCGQKSLASGGPLIQNVHSSKRILFSIVHDKTDKWDSFIKETEDINTLRECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIIGIPDKIPFKRPCTYGVPKLKRILEERHNIHFVIKRMFDERIFTGSKFTKDPTKLEPSSPPGEISPEPHRGAVLDLVGTPQTNSRSEKCSVSESCEPGTSGELGGIRQIKIEPDELDIIQITVPDRSPGSEEMQDPVPTHMASEESNYILETAAGTEKSSSEESRHEEKQLEGSDGIGDVLSHLRKQVEILFNTRYAKAIGISEPVKVPYSKFLMYPEDLFVVGLPEGILLRRPNCFGIAKLKKILQASNNIQFVIKRPELLAEGMKEPVSDSPAAKAAGERDSSEALLEDSIKRQGFQENYDARLSRIDIANTLREQVQDLFNKKYGEALGIKYPVQVPYKRIKSNPGSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIKFTVTRPFQGLIPKPDEDDANRLGEKVILREQVKELFNEKYGEALGLNRPVMVPYKLIRDSPDAVEVTGLPDDIPFRNPNTYDIHRLEKILKARESIRMVIINQLQPFAEICTEAKQTEKDSSVPKRKRKRISEGNSQWPMNMYMLDYGGLNVQIPGPINY
SIO_010081: GTF2IRD1
subclass of: SO_0000673
so part of: GTF2IRD1
location: complement(join(2307240..2307314,2308194..2308249,2309147..2309184,2309616..2309808,2311498..2311575,2320614..2320642,2321353..2321536,2322797..2322880,2323989..2324054,2324235..2324293,2325416..2325599,2326103..2326168,2326777..2326836,2327289..2327378,2329049..2329129,2330076..2330113,2333500..2333620,2336145..2336170,2337412..2337595,2338508..2338591,2339477..2339566,2340422..2340735,2341798..2341981,2345306..2345452,2348150..2348291,2350825..2350947))
location: region:2307240-2350947:-1
so has part: feature:2350825-2350947:-1:exon
so has part: feature:2348150-2348291:-1:exon
so has part: feature:2345306-2345452:-1:exon
so has part: feature:2341798-2341981:-1:exon
so has part: feature:2340422-2340735:-1:exon
so has part: feature:2339477-2339566:-1:exon
so has part: feature:2338508-2338591:-1:exon
so has part: feature:2337412-2337595:-1:exon
so has part: feature:2336145-2336170:-1:exon
so has part: feature:2333500-2333620:-1:exon
so has part: feature:2330076-2330113:-1:exon
so has part: feature:2329049-2329129:-1:exon
so has part: feature:2327289-2327378:-1:exon
so has part: feature:2326777-2326836:-1:exon
so has part: feature:2326103-2326168:-1:exon
so has part: feature:2325416-2325599:-1:exon
so has part: feature:2324235-2324293:-1:exon
so has part: feature:2323989-2324054:-1:exon
so has part: feature:2322797-2322880:-1:exon
so has part: feature:2321353-2321536:-1:exon
so has part: feature:2320614-2320642:-1:exon
so has part: feature:2311498-2311575:-1:exon
so has part: feature:2309616-2309808:-1:exon
so has part: feature:2309147-2309184:-1:exon
so has part: feature:2308194-2308249:-1:exon
so has part: feature:2307240-2307314:-1:exon

XP_030318255.1
type: Protein
SIO_000068: ncbiprotein

position:2307240:-1
position: 2307240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2350947:-1
position: 2350947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2350825-2350947:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2348150-2348291:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2345306-2345452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2341798-2341981:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2340422-2340735:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2339477-2339566:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2338508-2338591:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2337412-2337595:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2336145-2336170:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2333500-2333620:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2330076-2330113:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2329049-2329129:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2327289-2327378:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2326777-2326836:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2326103-2326168:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2325416-2325599:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2324235-2324293:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2323989-2324054:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2322797-2322880:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2321353-2321536:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2320614-2320642:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2311498-2311575:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2309616-2309808:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2309147-2309184:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2308194-2308249:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2307240-2307314:-1:exon

CLIP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: CLIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2383881..2468956)
location: region:2383881-2468956:-1
so has part: feature:2383881-2468956:-1:exon
subclass of: SO_0000010

103535840
type: Gene
SIO_000068: ncbigene

position:2383881:-1
position: 2383881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2468956:-1
position: 2468956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2383881-2468956:-1:exon

CLIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CLIP2
product: CAP-Gly domain containing linker protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads, 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030462446.1
SIO_010081: CLIP2
subclass of: SO_0000673
so part of: CLIP2
location: complement(join(2383881..2387651,2388245..2388307,2391857..2392042,2392652..2392811,2393311..2393467,2393901..2393984,2396528..2396585,2399369..2400313,2405826..2405886,2408222..2408325,2409388..2409585,2410878..2411091,2415193..2415317,2426788..2427326,2451997..2452207,2468655..2468956))
location: region:2383881-2468956:-1
so has part: feature:2468655-2468956:-1:exon
so has part: feature:2451997-2452207:-1:exon
so has part: feature:2426788-2427326:-1:exon
so has part: feature:2415193-2415317:-1:exon
so has part: feature:2410878-2411091:-1:exon
so has part: feature:2409388-2409585:-1:exon
so has part: feature:2408222-2408325:-1:exon
so has part: feature:2405826-2405886:-1:exon
so has part: feature:2399369-2400313:-1:exon
so has part: feature:2396528-2396585:-1:exon
so has part: feature:2393901-2393984:-1:exon
so has part: feature:2393311-2393467:-1:exon
so has part: feature:2392652-2392811:-1:exon
so has part: feature:2391857-2392042:-1:exon
so has part: feature:2388245-2388307:-1:exon
so has part: feature:2383881-2387651:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2468655-2468956:-1:exon

position:2468655:-1
position: 2468655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2451997-2452207:-1:exon

position:2451997:-1
position: 2451997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2452207:-1
position: 2452207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2426788-2427326:-1:exon

position:2426788:-1
position: 2426788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2427326:-1
position: 2427326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2415193-2415317:-1:exon

position:2415193:-1
position: 2415193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2415317:-1
position: 2415317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2410878-2411091:-1:exon

position:2410878:-1
position: 2410878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2411091:-1
position: 2411091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2409388-2409585:-1:exon

position:2409388:-1
position: 2409388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2409585:-1
position: 2409585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2408222-2408325:-1:exon

position:2408222:-1
position: 2408222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2408325:-1
position: 2408325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2405826-2405886:-1:exon

position:2405826:-1
position: 2405826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2405886:-1
position: 2405886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2399369-2400313:-1:exon

position:2399369:-1
position: 2399369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2400313:-1
position: 2400313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2396528-2396585:-1:exon

position:2396528:-1
position: 2396528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2396585:-1
position: 2396585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2393901-2393984:-1:exon

position:2393901:-1
position: 2393901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2393984:-1
position: 2393984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2393311-2393467:-1:exon

position:2393311:-1
position: 2393311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2393467:-1
position: 2393467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2392652-2392811:-1:exon

position:2392652:-1
position: 2392652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2392811:-1
position: 2392811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2391857-2392042:-1:exon

position:2391857:-1
position: 2391857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2392042:-1
position: 2392042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2388245-2388307:-1:exon

position:2388245:-1
position: 2388245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2388307:-1
position: 2388307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2383881-2387651:-1:exon

position:2387651:-1
position: 2387651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CLIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CLIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CAP-Gly domain-containing linker protein 2
translation: MLKPSGLKIPGRAGKHSSPVGRTSGTTAAAVTTSSKEGSPLHKQGPTSTSSTEKSCSKVAEVGDDFLGDFVVGERVWVNGVKPGVIQYLGETQFAPGQWAGVVLDDPVGKNDGSVGGVRYFECQPLQGIFTRPSKLTRQPVAEGSGSDAPSVDSLTAQNLSLHSGTATPPLSTRIIPLRESVLNSAMKTGNESGSNLSDSGSVKKGEKDLRLGDRVLVGGTKTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPPKFGLFAPIHKVIRIGFPSTSPAKAKKSKRMAMGVSALTHSPSSSSISSVSSVASSVGGRPSRSGLLTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHICEVEKEIAIMKAQHEQYVTEAEGNLQRARALVDGMQKEKIELLNQLEEEKRKVEDLQFRVEEESITKGDLELTTVAEKSRILELEEELSLRCSEVDELRQCLRSSHQAEPPEQNLGFQSEALRLRDQLLSATKEHQKESSQLKEKYEKTLKKYQQEMEKLKALNEKYAQEIVDLKHKVQQATNENMGLMDNWKSKLDTLASDHQKSLEDLKATLNTGSDTQHKEIVELKAVVESIKMEHQLELENLKAKHDIETAVHIKEKESLKLKLQEAVDEVEKSNSDWKMQLETKSNQHLLELQDVKDKCRDAELRMHELEKLHGEYKDQTQAIAFLKEQISLAEKKMLDYEVLQKTEAQSKQEIQRLQEKVLVLENKLQSMEALHPSQHANMIETNDISEEKIKMKQTMEDLQDKLSKRDKEVSLLVSQAETLRAQVSALETKCKTAEKKADSVLKEKKRLEGELESLTKKTHDASGQLVLISQELLKKERSLNELRALLLEANRHSPGPERDLSREVHKAEWRLKEQKLKDDIKGLREKLVVLDKEKSIPDQRRYSLIDPSSESELIRLQHRLLSTEDVLRNALEQGHQMEKLMEAMRLSSEKTQTVGNSGSANGIHQQDKSHKQEEKL
SIO_010081: CLIP2
subclass of: SO_0000673
so part of: CLIP2
location: complement(join(2387640..2387651,2388245..2388307,2391857..2392042,2392652..2392811,2393311..2393467,2393901..2393984,2396528..2396585,2399369..2400313,2405826..2405886,2408222..2408325,2409388..2409585,2410878..2411091,2415193..2415317,2426788..2427326,2451997..2452108))
location: region:2387640-2452108:-1
so has part: feature:2451997-2452108:-1:exon
so has part: feature:2426788-2427326:-1:exon
so has part: feature:2415193-2415317:-1:exon
so has part: feature:2410878-2411091:-1:exon
so has part: feature:2409388-2409585:-1:exon
so has part: feature:2408222-2408325:-1:exon
so has part: feature:2405826-2405886:-1:exon
so has part: feature:2399369-2400313:-1:exon
so has part: feature:2396528-2396585:-1:exon
so has part: feature:2393901-2393984:-1:exon
so has part: feature:2393311-2393467:-1:exon
so has part: feature:2392652-2392811:-1:exon
so has part: feature:2391857-2392042:-1:exon
so has part: feature:2388245-2388307:-1:exon
so has part: feature:2387640-2387651:-1:exon

XP_030318306.1
type: Protein
SIO_000068: ncbiprotein

position:2387640:-1
position: 2387640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2452108:-1
position: 2452108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2451997-2452108:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2426788-2427326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2415193-2415317:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2410878-2411091:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2409388-2409585:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2408222-2408325:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2405826-2405886:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2399369-2400313:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2396528-2396585:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2393901-2393984:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2393311-2393467:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2392652-2392811:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2391857-2392042:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2388245-2388307:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2387640-2387651:-1:exon

SBDS
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SBDS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2481442..2488509)
location: region:2481442-2488509:-1
so has part: feature:2481442-2488509:-1:exon
subclass of: SO_0000010

103535841
type: Gene
SIO_000068: ncbigene

position:2481442:-1
position: 2481442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2488509:-1
position: 2488509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2481442-2488509:-1:exon

SBDS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SBDS
product: SBDS ribosome maturation factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 7 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030462751.1
SIO_010081: SBDS
subclass of: SO_0000673
so part of: SBDS
location: complement(join(2481442..2483438,2484544..2484708,2486253..2486453,2487356..2487485,2488332..2488509))
location: region:2481442-2488509:-1
so has part: feature:2488332-2488509:-1:exon
so has part: feature:2487356-2487485:-1:exon
so has part: feature:2486253-2486453:-1:exon
so has part: feature:2484544-2484708:-1:exon
so has part: feature:2481442-2483438:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2488332-2488509:-1:exon

position:2488332:-1
position: 2488332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2487356-2487485:-1:exon

position:2487356:-1
position: 2487356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2487485:-1
position: 2487485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2486253-2486453:-1:exon

position:2486253:-1
position: 2486253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2486453:-1
position: 2486453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2484544-2484708:-1:exon

position:2484544:-1
position: 2484544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2484708:-1
position: 2484708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2481442-2483438:-1:exon

position:2483438:-1
position: 2483438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SBDS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SBDS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosome maturation protein SBDS
translation: MSIFTPTNQIRLTNVAVVRARRCGKRFEIACYRNKVMGWRSGAEKDLDEVLQTHTVFVSVSKGQVAKKEDLVQAFGTDDQTEICKMILSKGELQVSDKERHTQLEQMFRDIATVVADKCVNPETKRPYTVILIERAMRDIHYSVKPHKSTKQQALEVIRQLKETMQIERAHMRLRFILPAKEGKKLKEKLKPLIKVIENEEFHEQLEIVCLIDPGCFREIDELIRSQTKGKGTLEVLSLKDVEEGDEKLE
SIO_010081: SBDS
subclass of: SO_0000673
so part of: SBDS
location: complement(join(2483310..2483438,2484544..2484708,2486253..2486453,2487356..2487485,2488332..2488459))
location: region:2483310-2488459:-1
so has part: feature:2488332-2488459:-1:exon
so has part: feature:2487356-2487485:-1:exon
so has part: feature:2486253-2486453:-1:exon
so has part: feature:2484544-2484708:-1:exon
so has part: feature:2483310-2483438:-1:exon

XP_030318611.1
type: Protein
SIO_000068: ncbiprotein

position:2483310:-1
position: 2483310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2488459:-1
position: 2488459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2488332-2488459:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2487356-2487485:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2486253-2486453:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2484544-2484708:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2483310-2483438:-1:exon

SEPTIN4
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SEPTIN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2490734..2504170)
location: region:2490734-2504170:-1
so has part: feature:2490734-2504170:-1:exon
subclass of: SO_0000010

103535842
type: Gene
SIO_000068: ncbigene

position:2490734:-1
position: 2490734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2504170:-1
position: 2504170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2490734-2504170:-1:exon

SEPTIN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SEPTIN4
product: septin 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 47 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030462740.1
SIO_010081: SEPTIN4
subclass of: SO_0000673
so part of: SEPTIN4
location: complement(join(2490734..2492374,2492643..2492742,2494719..2494881,2495000..2495096,2495432..2495533,2495915..2496032,2496121..2496255,2496449..2496572,2497382..2497468,2497566..2497659,2497886..2498185,2504066..2504170))
location: region:2490734-2504170:-1
so has part: feature:2504066-2504170:-1:exon
so has part: feature:2497886-2498185:-1:exon
so has part: feature:2497566-2497659:-1:exon
so has part: feature:2497382-2497468:-1:exon
so has part: feature:2496449-2496572:-1:exon
so has part: feature:2496121-2496255:-1:exon
so has part: feature:2495915-2496032:-1:exon
so has part: feature:2495432-2495533:-1:exon
so has part: feature:2495000-2495096:-1:exon
so has part: feature:2494719-2494881:-1:exon
so has part: feature:2492643-2492742:-1:exon
so has part: feature:2490734-2492374:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2504066-2504170:-1:exon

position:2504066:-1
position: 2504066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2497886-2498185:-1:exon

position:2497886:-1
position: 2497886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2498185:-1
position: 2498185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2497566-2497659:-1:exon

position:2497566:-1
position: 2497566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2497659:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2497382-2497468:-1:exon

position:2497382:-1
position: 2497382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2497468:-1
position: 2497468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2496449-2496572:-1:exon

position:2496449:-1
position: 2496449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2496572:-1
position: 2496572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2496121-2496255:-1:exon

position:2496121:-1
position: 2496121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2496255:-1
position: 2496255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2495915-2496032:-1:exon

position:2495915:-1
position: 2495915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2496032:-1
position: 2496032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2495432-2495533:-1:exon

position:2495432:-1
position: 2495432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2495533:-1
position: 2495533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2495000-2495096:-1:exon

position:2495000:-1
position: 2495000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2495096:-1
position: 2495096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2494719-2494881:-1:exon

position:2494719:-1
position: 2494719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2494881:-1
position: 2494881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2492643-2492742:-1:exon

position:2492643:-1
position: 2492643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2492742:-1
position: 2492742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2490734-2492374:-1:exon

position:2492374:-1
position: 2492374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SEPTIN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SEPTIN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-4 isoform X1
translation: MIKRFLKEDSEEAELTQFLRDCPSADSSRKAEPPESRRDPSHPSCGLGRVPLDEPANERDTRIFSQSRPSDFQQHIAAPPPPSPNRPRSPWGQLDPYDSSEDDKEYVGFATLPNQVHRKSVKKGFDFTLMVAGESGLGKSTLVNSLFLTDMYRDRKLLNAEERITQTVEITKHVVDIEEKGVKLRLTIVDTPGFGDAVNNTECWKPVADYIDQQFEQYFRDESGLNRKNIQDNRVHCCIYFISPFGHGLRPLDVEFMRALHQRVNIVPVLAKADTLTPAEVERMKNKIREEINQYSIRIYQFPECDSDEDEEFKLQDQAMKESIPFAVIGSNTIVEAKGRRIRGRLYPWGIVEVENPSHCDFVKLRTMLVRTHMQDLKDVTRETHYENYRTQCIQSMTRMVVKERNRNKLTRESGTDFPIPVIPPVPDAETEKLIREKDEELRRMQEMLQKIQKQMKDSH
SIO_010081: SEPTIN4
subclass of: SO_0000673
so part of: SEPTIN4
location: complement(join(2492315..2492374,2492643..2492742,2494719..2494881,2495000..2495096,2495432..2495533,2495915..2496032,2496121..2496255,2496449..2496572,2497382..2497468,2497566..2497659,2497886..2498185,2504066..2504068))
location: region:2492315-2504068:-1
so has part: feature:2504066-2504068:-1:exon
so has part: feature:2497886-2498185:-1:exon
so has part: feature:2497566-2497659:-1:exon
so has part: feature:2497382-2497468:-1:exon
so has part: feature:2496449-2496572:-1:exon
so has part: feature:2496121-2496255:-1:exon
so has part: feature:2495915-2496032:-1:exon
so has part: feature:2495432-2495533:-1:exon
so has part: feature:2495000-2495096:-1:exon
so has part: feature:2494719-2494881:-1:exon
so has part: feature:2492643-2492742:-1:exon
so has part: feature:2492315-2492374:-1:exon

XP_030318600.1
type: Protein
SIO_000068: ncbiprotein

position:2492315:-1
position: 2492315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2504068:-1
position: 2504068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2504066-2504068:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2497886-2498185:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2497566-2497659:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2497382-2497468:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2496449-2496572:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2496121-2496255:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2495915-2496032:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2495432-2495533:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2495000-2495096:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2494719-2494881:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2492643-2492742:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2492315-2492374:-1:exon

SEPTIN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SEPTIN4
product: septin 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030462741.1
SIO_010081: SEPTIN4
subclass of: SO_0000673
so part of: SEPTIN4
location: complement(join(2494073..2494173,2494719..2494881,2495000..2495096,2495432..2495533,2495915..2496032,2496121..2496255,2496449..2496572,2497382..2497468,2497566..2497659,2497886..2498185,2504066..2504163))
location: region:2494073-2504163:-1
so has part: feature:2504066-2504163:-1:exon
so has part: feature:2497886-2498185:-1:exon
so has part: feature:2497566-2497659:-1:exon
so has part: feature:2497382-2497468:-1:exon
so has part: feature:2496449-2496572:-1:exon
so has part: feature:2496121-2496255:-1:exon
so has part: feature:2495915-2496032:-1:exon
so has part: feature:2495432-2495533:-1:exon
so has part: feature:2495000-2495096:-1:exon
so has part: feature:2494719-2494881:-1:exon
so has part: feature:2494073-2494173:-1:exon

position:2494073:-1
position: 2494073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2504163:-1
position: 2504163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2504066-2504163:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2497886-2498185:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2497566-2497659:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2497382-2497468:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2496449-2496572:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2496121-2496255:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2495915-2496032:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2495432-2495533:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2495000-2495096:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2494719-2494881:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2494073-2494173:-1:exon

position:2494173:-1
position: 2494173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SEPTIN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SEPTIN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-4 isoform X2
translation: MIKRFLKEDSEEAELTQFLRDCPSADSSRKAEPPESRRDPSHPSCGLGRVPLDEPANERDTRIFSQSRPSDFQQHIAAPPPPSPNRPRSPWGQLDPYDSSEDDKEYVGFATLPNQVHRKSVKKGFDFTLMVAGESGLGKSTLVNSLFLTDMYRDRKLLNAEERITQTVEITKHVVDIEEKGVKLRLTIVDTPGFGDAVNNTECWKPVADYIDQQFEQYFRDESGLNRKNIQDNRVHCCIYFISPFGHGLRPLDVEFMRALHQRVNIVPVLAKADTLTPAEVERMKNKIREEINQYSIRIYQFPECDSDEDEEFKLQDQAMKESIPFAVIGSNTIVEAKGRRIRGRLYPWGIVEVENPSHCDFVKLRTMLVRTHMQDLKDVTRETHYENYRTQCIQSMTRMVVKERNRKRDPSSTLRLCCSDCCAD
SIO_010081: SEPTIN4
subclass of: SO_0000673
so part of: SEPTIN4
location: complement(join(2494119..2494173,2494719..2494881,2495000..2495096,2495432..2495533,2495915..2496032,2496121..2496255,2496449..2496572,2497382..2497468,2497566..2497659,2497886..2498185,2504066..2504068))
location: region:2494119-2504068:-1
so has part: feature:2504066-2504068:-1:exon
so has part: feature:2497886-2498185:-1:exon
so has part: feature:2497566-2497659:-1:exon
so has part: feature:2497382-2497468:-1:exon
so has part: feature:2496449-2496572:-1:exon
so has part: feature:2496121-2496255:-1:exon
so has part: feature:2495915-2496032:-1:exon
so has part: feature:2495432-2495533:-1:exon
so has part: feature:2495000-2495096:-1:exon
so has part: feature:2494719-2494881:-1:exon
so has part: feature:2494119-2494173:-1:exon

XP_030318601.1
type: Protein
SIO_000068: ncbiprotein

position:2494119:-1
position: 2494119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2504066-2504068:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2497886-2498185:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2497566-2497659:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2497382-2497468:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2496449-2496572:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2496121-2496255:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2495915-2496032:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2495432-2495533:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2495000-2495096:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2494719-2494881:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2494119-2494173:-1:exon

LIMK1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LIMK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2510556..2518407)
location: region:2510556-2518407:-1
so has part: feature:2510556-2518407:-1:exon
subclass of: SO_0000010

103535844
type: Gene
SIO_000068: ncbigene

position:2510556:-1
position: 2510556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2518407:-1
position: 2518407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2510556-2518407:-1:exon

LIMK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LIMK1
product: LIM domain kinase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 1 long SRA read, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030462730.1
SIO_010081: LIMK1
subclass of: SO_0000673
so part of: LIMK1
location: complement(join(2510556..2510799,2510899..2511056,2511199..2511254,2511368..2511524,2511627..2511692,2511796..2511855,2512200..2512331,2512573..2512659,2513016..2513199,2513286..2513470,2513547..2513652,2514244..2514435,2514519..2514628,2514966..2515104,2516617..2516713,2518309..2518407))
location: region:2510556-2518407:-1
so has part: feature:2518309-2518407:-1:exon
so has part: feature:2516617-2516713:-1:exon
so has part: feature:2514966-2515104:-1:exon
so has part: feature:2514519-2514628:-1:exon
so has part: feature:2514244-2514435:-1:exon
so has part: feature:2513547-2513652:-1:exon
so has part: feature:2513286-2513470:-1:exon
so has part: feature:2513016-2513199:-1:exon
so has part: feature:2512573-2512659:-1:exon
so has part: feature:2512200-2512331:-1:exon
so has part: feature:2511796-2511855:-1:exon
so has part: feature:2511627-2511692:-1:exon
so has part: feature:2511368-2511524:-1:exon
so has part: feature:2511199-2511254:-1:exon
so has part: feature:2510899-2511056:-1:exon
so has part: feature:2510556-2510799:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2518309-2518407:-1:exon

position:2518309:-1
position: 2518309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2516617-2516713:-1:exon

position:2516617:-1
position: 2516617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2516713:-1
position: 2516713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2514966-2515104:-1:exon

position:2514966:-1
position: 2514966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2515104:-1
position: 2515104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2514519-2514628:-1:exon

position:2514519:-1
position: 2514519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2514628:-1
position: 2514628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2514244-2514435:-1:exon

position:2514244:-1
position: 2514244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2514435:-1
position: 2514435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2513547-2513652:-1:exon

position:2513547:-1
position: 2513547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2513652:-1
position: 2513652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2513286-2513470:-1:exon

position:2513286:-1
position: 2513286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2513470:-1
position: 2513470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2513016-2513199:-1:exon

position:2513016:-1
position: 2513016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2513199:-1
position: 2513199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2512573-2512659:-1:exon

position:2512573:-1
position: 2512573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2512659:-1
position: 2512659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2512200-2512331:-1:exon

position:2512200:-1
position: 2512200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2512331:-1
position: 2512331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2511796-2511855:-1:exon

position:2511796:-1
position: 2511796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2511855:-1
position: 2511855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2511627-2511692:-1:exon

position:2511627:-1
position: 2511627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2511692:-1
position: 2511692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2511368-2511524:-1:exon

position:2511368:-1
position: 2511368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2511524:-1
position: 2511524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2511199-2511254:-1:exon

position:2511199:-1
position: 2511199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2511254:-1
position: 2511254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2510899-2511056:-1:exon

position:2510899:-1
position: 2510899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2511056:-1
position: 2511056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2510556-2510799:-1:exon

position:2510799:-1
position: 2510799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LIMK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LIMK1
product: LIM domain kinase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 long SRA read, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030462731.1
SIO_010081: LIMK1
subclass of: SO_0000673
so part of: LIMK1
location: complement(join(2510556..2510799,2510899..2511056,2511199..2511254,2511368..2511524,2511627..2511692,2511796..2511855,2512200..2512331,2512573..2512659,2513016..2513199,2513286..2513470,2513547..2513652,2514244..2514435,2514519..2514628,2514966..2515104,2516167..2516263))
location: region:2510556-2516263:-1
so has part: feature:2516167-2516263:-1:exon
so has part: feature:2514966-2515104:-1:exon
so has part: feature:2514519-2514628:-1:exon
so has part: feature:2514244-2514435:-1:exon
so has part: feature:2513547-2513652:-1:exon
so has part: feature:2513286-2513470:-1:exon
so has part: feature:2513016-2513199:-1:exon
so has part: feature:2512573-2512659:-1:exon
so has part: feature:2512200-2512331:-1:exon
so has part: feature:2511796-2511855:-1:exon
so has part: feature:2511627-2511692:-1:exon
so has part: feature:2511368-2511524:-1:exon
so has part: feature:2511199-2511254:-1:exon
so has part: feature:2510899-2511056:-1:exon
so has part: feature:2510556-2510799:-1:exon

position:2516263:-1
position: 2516263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2516167-2516263:-1:exon

position:2516167:-1
position: 2516167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2514966-2515104:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2514519-2514628:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2514244-2514435:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2513547-2513652:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2513286-2513470:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2513016-2513199:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2512573-2512659:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2512200-2512331:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2511796-2511855:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2511627-2511692:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2511368-2511524:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2511199-2511254:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2510899-2511056:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2510556-2510799:-1:exon

LIMK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LIMK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain kinase 1 isoform X1
translation: MRLMLLCCTWRDEPMGEDEGTDLPVCASCRQGIFDGQYLQALSADWHADCFRCCECGASLSHQYYEKDGRLYCKKDYWAHFGELCHGCSEHITKGLVMVAGEQKYHPECFICLNCHTFIGDGDTYALVERSKLYCGHCYYQMVVTPVIEQILPDSPAARIPHTVTLVSIPACSDGKRGFSVSIDQGCGTEHPCTVRVREVDPDCISPDMKNSIHVGDRILEINGTPISHVPLDEIDLLIQETSRLLQLTIEHDPHEPLAHEPGPACSPLPTPHSPLCSPTAQPCGDPSTMRQRTVMRSCSTDKSPGPGSVGSPVSLRKDIGRSESLRVVSRTHRIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKEKRLNFITEYIKGGTLRGLIKTMDSHYPWSQRVSFAKDIAAGMAYLHSMNIIHRDLNSHNCLVRENKSVVVADFGLARLMVDEKNQPEHLKNLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDIFSFGIVLCEIIGRVSADPDYLPRTTDFGLNIRGFLDRYCPPACPPSFFPIAVCCCDLDPEKRPSFSKLEQWLESLRMHLEIHLPLSSQLEQLDRAFGETHRRGEGGLPAPPR
SIO_010081: LIMK1
subclass of: SO_0000673
so part of: LIMK1
location: complement(join(2510646..2510799,2510899..2511056,2511199..2511254,2511368..2511524,2511627..2511692,2511796..2511855,2512200..2512331,2512573..2512659,2513016..2513199,2513286..2513470,2513547..2513652,2514244..2514435,2514519..2514628,2514966..2515104,2516617..2516713,2518309..2518366))
location: region:2510646-2518366:-1
so has part: feature:2518309-2518366:-1:exon
so has part: feature:2516617-2516713:-1:exon
so has part: feature:2514966-2515104:-1:exon
so has part: feature:2514519-2514628:-1:exon
so has part: feature:2514244-2514435:-1:exon
so has part: feature:2513547-2513652:-1:exon
so has part: feature:2513286-2513470:-1:exon
so has part: feature:2513016-2513199:-1:exon
so has part: feature:2512573-2512659:-1:exon
so has part: feature:2512200-2512331:-1:exon
so has part: feature:2511796-2511855:-1:exon
so has part: feature:2511627-2511692:-1:exon
so has part: feature:2511368-2511524:-1:exon
so has part: feature:2511199-2511254:-1:exon
so has part: feature:2510899-2511056:-1:exon
so has part: feature:2510646-2510799:-1:exon

XP_030318590.1
type: Protein
SIO_000068: ncbiprotein

position:2510646:-1
position: 2510646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2518366:-1
position: 2518366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2518309-2518366:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2516617-2516713:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2514966-2515104:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2514519-2514628:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2514244-2514435:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2513547-2513652:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2513286-2513470:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2513016-2513199:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2512573-2512659:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2512200-2512331:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2511796-2511855:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2511627-2511692:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2511368-2511524:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2511199-2511254:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2510899-2511056:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2510646-2510799:-1:exon

LIMK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LIMK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain kinase 1 isoform X2
translation: MLAAVLRKSRVLSAGAKCCECGASLSHQYYEKDGRLYCKKDYWAHFGELCHGCSEHITKGLVMVAGEQKYHPECFICLNCHTFIGDGDTYALVERSKLYCGHCYYQMVVTPVIEQILPDSPAARIPHTVTLVSIPACSDGKRGFSVSIDQGCGTEHPCTVRVREVDPDCISPDMKNSIHVGDRILEINGTPISHVPLDEIDLLIQETSRLLQLTIEHDPHEPLAHEPGPACSPLPTPHSPLCSPTAQPCGDPSTMRQRTVMRSCSTDKSPGPGSVGSPVSLRKDIGRSESLRVVSRTHRIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKEKRLNFITEYIKGGTLRGLIKTMDSHYPWSQRVSFAKDIAAGMAYLHSMNIIHRDLNSHNCLVRENKSVVVADFGLARLMVDEKNQPEHLKNLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDIFSFGIVLCEIIGRVSADPDYLPRTTDFGLNIRGFLDRYCPPACPPSFFPIAVCCCDLDPEKRPSFSKLEQWLESLRMHLEIHLPLSSQLEQLDRAFGETHRRGEGGLPAPPR
SIO_010081: LIMK1
subclass of: SO_0000673
so part of: LIMK1
location: complement(join(2510646..2510799,2510899..2511056,2511199..2511254,2511368..2511524,2511627..2511692,2511796..2511855,2512200..2512331,2512573..2512659,2513016..2513199,2513286..2513470,2513547..2513652,2514244..2514435,2514519..2514628,2514966..2515104,2516167..2516216))
location: region:2510646-2516216:-1
so has part: feature:2516167-2516216:-1:exon
so has part: feature:2514966-2515104:-1:exon
so has part: feature:2514519-2514628:-1:exon
so has part: feature:2514244-2514435:-1:exon
so has part: feature:2513547-2513652:-1:exon
so has part: feature:2513286-2513470:-1:exon
so has part: feature:2513016-2513199:-1:exon
so has part: feature:2512573-2512659:-1:exon
so has part: feature:2512200-2512331:-1:exon
so has part: feature:2511796-2511855:-1:exon
so has part: feature:2511627-2511692:-1:exon
so has part: feature:2511368-2511524:-1:exon
so has part: feature:2511199-2511254:-1:exon
so has part: feature:2510899-2511056:-1:exon
so has part: feature:2510646-2510799:-1:exon

XP_030318591.1
type: Protein
SIO_000068: ncbiprotein

position:2516216:-1
position: 2516216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2516167-2516216:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2514966-2515104:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2514519-2514628:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2514244-2514435:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2513547-2513652:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2513286-2513470:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2513016-2513199:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2512573-2512659:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2512200-2512331:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2511796-2511855:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2511627-2511692:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2511368-2511524:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2511199-2511254:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2510899-2511056:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2510646-2510799:-1:exon

ELN
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ELN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2523594..2555502)
location: region:2523594-2555502:-1
so has part: feature:2523594-2555502:-1:exon
subclass of: SO_0000010

115599395
type: Gene
SIO_000068: ncbigene

position:2523594:-1
position: 2523594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2555502:-1
position: 2555502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2523594-2555502:-1:exon

ELN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ELN
product: elastin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030462729.1
SIO_010081: ELN
subclass of: SO_0000673
so part of: ELN
location: complement(join(2523594..2523707,2524091..2524138,2524231..2524341,2525681..2525728,2525821..2525931,2527641..2527688,2527781..2527891,2528894..2528941,2529034..2529093,2529130..2529180,2531756..2531797,2531890..2532000,2533975..2534022,2534115..2534243,2536822..2536869,2536962..2537090,2539278..2539325,2539418..2539528,2540153..2540212,2540303..2540386,2540529..2540573,2540834..2540902,2541387..2541413,2543989..2544060,2544275..2544301,2544537..2544608,2545669..2545716,2545803..2545868,2546478..2546570,2547169..2547213,2548415..2548447,2548634..2548660,2549121..2549174,2555349..2555502))
location: region:2523594-2555502:-1
so has part: feature:2555349-2555502:-1:exon
so has part: feature:2549121-2549174:-1:exon
so has part: feature:2548634-2548660:-1:exon
so has part: feature:2548415-2548447:-1:exon
so has part: feature:2547169-2547213:-1:exon
so has part: feature:2546478-2546570:-1:exon
so has part: feature:2545803-2545868:-1:exon
so has part: feature:2545669-2545716:-1:exon
so has part: feature:2544537-2544608:-1:exon
so has part: feature:2544275-2544301:-1:exon
so has part: feature:2543989-2544060:-1:exon
so has part: feature:2541387-2541413:-1:exon
so has part: feature:2540834-2540902:-1:exon
so has part: feature:2540529-2540573:-1:exon
so has part: feature:2540303-2540386:-1:exon
so has part: feature:2540153-2540212:-1:exon
so has part: feature:2539418-2539528:-1:exon
so has part: feature:2539278-2539325:-1:exon
so has part: feature:2536962-2537090:-1:exon
so has part: feature:2536822-2536869:-1:exon
so has part: feature:2534115-2534243:-1:exon
so has part: feature:2533975-2534022:-1:exon
so has part: feature:2531890-2532000:-1:exon
so has part: feature:2531756-2531797:-1:exon
so has part: feature:2529130-2529180:-1:exon
so has part: feature:2529034-2529093:-1:exon
so has part: feature:2528894-2528941:-1:exon
so has part: feature:2527781-2527891:-1:exon
so has part: feature:2527641-2527688:-1:exon
so has part: feature:2525821-2525931:-1:exon
so has part: feature:2525681-2525728:-1:exon
so has part: feature:2524231-2524341:-1:exon
so has part: feature:2524091-2524138:-1:exon
so has part: feature:2523594-2523707:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2555349-2555502:-1:exon

position:2555349:-1
position: 2555349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2549121-2549174:-1:exon

position:2549121:-1
position: 2549121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2549174:-1
position: 2549174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2548634-2548660:-1:exon

position:2548634:-1
position: 2548634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2548660:-1
position: 2548660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2548415-2548447:-1:exon

position:2548415:-1
position: 2548415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2548447:-1
position: 2548447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2547169-2547213:-1:exon

position:2547169:-1
position: 2547169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2547213:-1
position: 2547213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2546478-2546570:-1:exon

position:2546478:-1
position: 2546478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2546570:-1
position: 2546570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2545803-2545868:-1:exon

position:2545803:-1
position: 2545803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2545868:-1
position: 2545868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2545669-2545716:-1:exon

position:2545669:-1
position: 2545669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2545716:-1
position: 2545716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2544537-2544608:-1:exon

position:2544537:-1
position: 2544537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2544608:-1
position: 2544608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2544275-2544301:-1:exon

position:2544275:-1
position: 2544275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2544301:-1
position: 2544301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2543989-2544060:-1:exon

position:2543989:-1
position: 2543989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2544060:-1
position: 2544060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2541387-2541413:-1:exon

position:2541387:-1
position: 2541387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2541413:-1
position: 2541413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2540834-2540902:-1:exon

position:2540834:-1
position: 2540834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2540902:-1
position: 2540902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2540529-2540573:-1:exon

position:2540529:-1
position: 2540529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2540573:-1
position: 2540573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2540303-2540386:-1:exon

position:2540303:-1
position: 2540303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2540386:-1
position: 2540386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2540153-2540212:-1:exon

position:2540153:-1
position: 2540153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2540212:-1
position: 2540212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2539418-2539528:-1:exon

position:2539418:-1
position: 2539418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2539528:-1
position: 2539528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2539278-2539325:-1:exon

position:2539278:-1
position: 2539278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2539325:-1
position: 2539325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2536962-2537090:-1:exon

position:2536962:-1
position: 2536962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2537090:-1
position: 2537090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2536822-2536869:-1:exon

position:2536822:-1
position: 2536822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2536869:-1
position: 2536869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2534115-2534243:-1:exon

position:2534115:-1
position: 2534115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2534243:-1
position: 2534243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2533975-2534022:-1:exon

position:2533975:-1
position: 2533975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2534022:-1
position: 2534022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2531890-2532000:-1:exon

position:2531890:-1
position: 2531890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2532000:-1
position: 2532000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2531756-2531797:-1:exon

position:2531756:-1
position: 2531756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2531797:-1
position: 2531797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2529130-2529180:-1:exon

position:2529130:-1
position: 2529130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2529180:-1
position: 2529180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2529034-2529093:-1:exon

position:2529034:-1
position: 2529034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2529093:-1
position: 2529093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2528894-2528941:-1:exon

position:2528894:-1
position: 2528894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2528941:-1
position: 2528941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2527781-2527891:-1:exon

position:2527781:-1
position: 2527781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2527891:-1
position: 2527891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2527641-2527688:-1:exon

position:2527641:-1
position: 2527641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2527688:-1
position: 2527688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2525821-2525931:-1:exon

position:2525821:-1
position: 2525821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2525931:-1
position: 2525931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2525681-2525728:-1:exon

position:2525681:-1
position: 2525681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2525728:-1
position: 2525728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:2524231-2524341:-1:exon

position:2524231:-1
position: 2524231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2524341:-1
position: 2524341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:2524091-2524138:-1:exon

position:2524091:-1
position: 2524091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2524138:-1
position: 2524138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:2523594-2523707:-1:exon

position:2523707:-1
position: 2523707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ELN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ELN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elastin
translation: MARQAAAPLLPGVLFLFSILPASQQGGVPGAIPGGGVPGAGFFPGAGVGGLGAGLGAGGKPLKPGVGALGGLGPLGLQPGAGGLFPGGAYPGGVFPGAASAAALKAAAKAGAVAPGAVQPGAGAAGKPPKIPGAGIPGAFPGGVLPGTGIRFPGVGVLPGVPTGAGVKPKGPGAGAFAGIPGLGGFGGQQPGVPLGYPIKAPKLPGGYGLPYTTGFGPGGIGAGIGAGGKAGYPTGTGVGAQAAAAKAAAKYGAGVLPGAGAIPGVGGVVPGAGVVPGAGAVGPAAAAAAAKAAAKAGAVGAGVGGVPGLVPGVGGVPGVGGVPGLVPGVGGVPGVAGVGAPAAAAAAKAAKFGAGVGGVPGLVPGVGGVPGVGGVPGVGGVPGLVPGVGGVPGVAGVGAPAAAAAAKAAKFGAGVGGVPGLVPGVGGVPGVGGVPGVGGVPGLVPGVGGVPGVAGVGAPAAAAAAKAAKFGAGVGGVPGLVPGIGGVPGVGGVPGLVPGVGGVPGVAGVGAPAAAAKAAKFGAGVGGVPGLVPGVGGVPGVGGVPGLVPGVGGVPGVAGVGAPAAAAAAKAAKFGAGVGGVPGLVPGVGGVPGVGGVPGLVPGVGGVPGVAGVGAPAAAAAAKAAKFGAGVGGVPGLVPGVGGVPGVGGVPGLVPGVGGVPGVAGVGAPAAAAAAKAAKFGAGVGGVPGLVPGVGGVPSVGGVPGLVPGVGGVPGVAGVGAPAAAAAAKAAKFGAGRVPGVGVPGVGVQ
SIO_010081: ELN
subclass of: SO_0000673
so part of: ELN
location: complement(join(2523658..2523707,2524091..2524138,2524231..2524341,2525681..2525728,2525821..2525931,2527641..2527688,2527781..2527891,2528894..2528941,2529034..2529093,2529130..2529180,2531756..2531797,2531890..2532000,2533975..2534022,2534115..2534243,2536822..2536869,2536962..2537090,2539278..2539325,2539418..2539528,2540153..2540212,2540303..2540386,2540529..2540573,2540834..2540902,2541387..2541413,2543989..2544060,2544275..2544301,2544537..2544608,2545669..2545716,2545803..2545868,2546478..2546570,2547169..2547213,2548415..2548447,2548634..2548660,2549121..2549174,2555349..2555427))
location: region:2523658-2555427:-1
so has part: feature:2555349-2555427:-1:exon
so has part: feature:2549121-2549174:-1:exon
so has part: feature:2548634-2548660:-1:exon
so has part: feature:2548415-2548447:-1:exon
so has part: feature:2547169-2547213:-1:exon
so has part: feature:2546478-2546570:-1:exon
so has part: feature:2545803-2545868:-1:exon
so has part: feature:2545669-2545716:-1:exon
so has part: feature:2544537-2544608:-1:exon
so has part: feature:2544275-2544301:-1:exon
so has part: feature:2543989-2544060:-1:exon
so has part: feature:2541387-2541413:-1:exon
so has part: feature:2540834-2540902:-1:exon
so has part: feature:2540529-2540573:-1:exon
so has part: feature:2540303-2540386:-1:exon
so has part: feature:2540153-2540212:-1:exon
so has part: feature:2539418-2539528:-1:exon
so has part: feature:2539278-2539325:-1:exon
so has part: feature:2536962-2537090:-1:exon
so has part: feature:2536822-2536869:-1:exon
so has part: feature:2534115-2534243:-1:exon
so has part: feature:2533975-2534022:-1:exon
so has part: feature:2531890-2532000:-1:exon
so has part: feature:2531756-2531797:-1:exon
so has part: feature:2529130-2529180:-1:exon
so has part: feature:2529034-2529093:-1:exon
so has part: feature:2528894-2528941:-1:exon
so has part: feature:2527781-2527891:-1:exon
so has part: feature:2527641-2527688:-1:exon
so has part: feature:2525821-2525931:-1:exon
so has part: feature:2525681-2525728:-1:exon
so has part: feature:2524231-2524341:-1:exon
so has part: feature:2524091-2524138:-1:exon
so has part: feature:2523658-2523707:-1:exon

XP_030318589.1
type: Protein
SIO_000068: ncbiprotein

position:2523658:-1
position: 2523658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2555427:-1
position: 2555427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2555349-2555427:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2549121-2549174:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2548634-2548660:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2548415-2548447:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2547169-2547213:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2546478-2546570:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2545803-2545868:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2545669-2545716:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2544537-2544608:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2544275-2544301:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2543989-2544060:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2541387-2541413:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2540834-2540902:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2540529-2540573:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2540303-2540386:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2540153-2540212:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2539418-2539528:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2539278-2539325:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2536962-2537090:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2536822-2536869:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2534115-2534243:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2533975-2534022:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2531890-2532000:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2531756-2531797:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2529130-2529180:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2529034-2529093:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2528894-2528941:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2527781-2527891:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2527641-2527688:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2525821-2525931:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2525681-2525728:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2524231-2524341:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2524091-2524138:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2523658-2523707:-1:exon

METTL27
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: METTL27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2650027..2651742
location: region:2650027-2651742:1
so has part: feature:2650027-2651742:1:exon
subclass of: SO_0000010

103535845
type: Gene
SIO_000068: ncbigene

position:2650027:1
position: 2650027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2651742:1
position: 2651742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2650027-2651742:1:exon

METTL27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: METTL27
product: methyltransferase like 27
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 7% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030462661.1
SIO_010081: METTL27
subclass of: SO_0000673
so part of: METTL27
location: join(2650027..2650547,2650617..2650698,2650746..2650919,2650978..2651042,2651331..2651742)
location: region:2650027-2651742:1
so has part: feature:2650027-2650547:1:exon
so has part: feature:2650617-2650698:1:exon
so has part: feature:2650746-2650919:1:exon
so has part: feature:2650978-2651042:1:exon
so has part: feature:2651331-2651742:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2650027-2650547:1:exon

position:2650547:1
position: 2650547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2650617-2650698:1:exon

position:2650617:1
position: 2650617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2650698:1
position: 2650698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2650746-2650919:1:exon

position:2650746:1
position: 2650746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2650919:1
position: 2650919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2650978-2651042:1:exon

position:2650978:1
position: 2650978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2651042:1
position: 2651042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2651331-2651742:1:exon

position:2651331:1
position: 2651331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

METTL27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: METTL27
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: methyltransferase-like protein 27
translation: MSPCLNTWSPLGPLGVDPPQGTWCHPPNTLDHPPGTLGTTPPGHSDTRFWAARCPPPPAERGRAPIAPPANGGGGRPGGVAWRGRTNGARGEERGANGAREAGPAVPRGGASGAHASGRWRCGGDAGGGVGGAGVGMGLVMMRVLAVRVWAVHGGVELXDLLLVCGGWAACYEQDVAALGYRTPHLAAASVASAFPGVAAPLSRQGREVTAPSVRLSPQLHRRGFRCLHGVDGSAGMLERARSTGLYRELRQCPCPEGAEHCDAVTVVGARGEGQVRVTARWPASWLQAGCHCLSLLPPSRGNAIPSGRQHWCHLSPLPTGGSLCLTSRSNPSSLRYRAELEAALGRQGAWHKVLAQEVEHWEKATSEEESTQGTGCISGMVYIHGKCPVPALQQGSGGRGGVWVCTL
SIO_010081: METTL27
subclass of: SO_0000673
so part of: METTL27
location: join(2650027..2650547,2650617..2650698,2650746..2650919,2650978..2651042,2651331..2651714)
location: region:2650027-2651714:1
so has part: feature:2650027-2650547:1:exon
so has part: feature:2650617-2650698:1:exon
so has part: feature:2650746-2650919:1:exon
so has part: feature:2650978-2651042:1:exon
so has part: feature:2651331-2651714:1:exon

XP_030318521.1
type: Protein
SIO_000068: ncbiprotein

position:2651714:1
position: 2651714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2650027-2650547:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2650617-2650698:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2650746-2650919:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2650978-2651042:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2651331-2651714:1:exon

LOC103535817
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103535817
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2653028..2660892)
location: region:2653028-2660892:-1
so has part: feature:2653028-2660892:-1:exon
subclass of: SO_0000010

103535817
type: Gene
SIO_000068: ncbigene

position:2653028:-1
position: 2653028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2660892:-1
position: 2660892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2653028-2660892:-1:exon

LOC103535817
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103535817
product: claudin-4-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 62 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030462754.1
SIO_010081: LOC103535817
subclass of: SO_0000673
so part of: LOC103535817
location: complement(join(2653028..2653873,2660829..2660892))
location: region:2653028-2660892:-1
so has part: feature:2660829-2660892:-1:exon
so has part: feature:2653028-2653873:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2660829-2660892:-1:exon

position:2660829:-1
position: 2660829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2653028-2653873:-1:exon

position:2653873:-1
position: 2653873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103535817
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103535817
product: claudin-4-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 62 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030462755.1
SIO_010081: LOC103535817
subclass of: SO_0000673
so part of: LOC103535817
location: complement(join(2653028..2653873,2660060..2660179))
location: region:2653028-2660179:-1
so has part: feature:2660060-2660179:-1:exon
so has part: feature:2653028-2653873:-1:exon

position:2660179:-1
position: 2660179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2660060-2660179:-1:exon

position:2660060:-1
position: 2660060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2653028-2653873:-1:exon

LOC103535817
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103535817
product: claudin-4-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 62 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030462753.1
SIO_010081: LOC103535817
subclass of: SO_0000673
so part of: LOC103535817
location: complement(join(2653028..2653873,2655629..2655897))
location: region:2653028-2655897:-1
so has part: feature:2655629-2655897:-1:exon
so has part: feature:2653028-2653873:-1:exon

position:2655897:-1
position: 2655897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2655629-2655897:-1:exon

position:2655629:-1
position: 2655629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2653028-2653873:-1:exon

LOC103535817
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103535817
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: claudin-4-like isoform X1
translation: MAEVLSMAMMTMQLGGLMLAILGWLGSILTCALPMWKVTAFIGSNIVVAQVFWEGLWMNCVYESTGQMQCKAYDSLLELTSDLQVARALVVTSIFVAAFAFLTAILGADCTRCVDDKGTKTRISVVAGVIFILASIMLLIPVSWSANSIVSNFYNPMVPEALKRELGAALYIGWASSALQLFGGGILCCSGPPSQQDPYPKKYRAVKTCSSMGYPMQDYV
SIO_010081: LOC103535817
subclass of: SO_0000673
so part of: LOC103535817
location: complement(join(2653220..2653873,2655629..2655637))
location: region:2653220-2655637:-1
so has part: feature:2655629-2655637:-1:exon
so has part: feature:2653220-2653873:-1:exon

XP_030318613.1
type: Protein
SIO_000068: ncbiprotein

position:2653220:-1
position: 2653220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2655637:-1
position: 2655637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2655629-2655637:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2653220-2653873:-1:exon

LOC103535817
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103535817
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: claudin-4-like isoform X2
translation: MAMMTMQLGGLMLAILGWLGSILTCALPMWKVTAFIGSNIVVAQVFWEGLWMNCVYESTGQMQCKAYDSLLELTSDLQVARALVVTSIFVAAFAFLTAILGADCTRCVDDKGTKTRISVVAGVIFILASIMLLIPVSWSANSIVSNFYNPMVPEALKRELGAALYIGWASSALQLFGGGILCCSGPPSQQDPYPKKYRAVKTCSSMGYPMQDYV
SIO_010081: LOC103535817
subclass of: SO_0000673
so part of: LOC103535817
location: complement(2653220..2653864)
location: region:2653220-2653864:-1
so has part: feature:2653220-2653864:-1:exon

XP_030318614.1
type: Protein
SIO_000068: ncbiprotein

position:2653864:-1
position: 2653864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2653220-2653864:-1:exon

LOC103535817
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103535817
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: claudin-4-like isoform X2
translation: MAMMTMQLGGLMLAILGWLGSILTCALPMWKVTAFIGSNIVVAQVFWEGLWMNCVYESTGQMQCKAYDSLLELTSDLQVARALVVTSIFVAAFAFLTAILGADCTRCVDDKGTKTRISVVAGVIFILASIMLLIPVSWSANSIVSNFYNPMVPEALKRELGAALYIGWASSALQLFGGGILCCSGPPSQQDPYPKKYRAVKTCSSMGYPMQDYV
SIO_010081: LOC103535817
subclass of: SO_0000673
so part of: LOC103535817
location: complement(2653220..2653864)
location: region:2653220-2653864:-1
so has part: feature:2653220-2653864:-1:exon

XP_030318615.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2653220-2653864:-1:exon

CLDN4
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: CLDN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2656587..2657216)
location: region:2656587-2657216:-1
so has part: feature:2656587-2657216:-1:exon
subclass of: SO_0000010

103535818
type: Gene
SIO_000068: ncbigene

position:2656587:-1
position: 2656587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2657216:-1
position: 2657216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2656587-2657216:-1:exon

CLDN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CLDN4
product: claudin 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 63 Proteins, and 22% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008501919.2
SIO_010081: CLDN4
subclass of: SO_0000673
so part of: CLDN4
location: complement(2656587..2657216)
location: region:2656587-2657216:-1
so has part: feature:2656587-2657216:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2656587-2657216:-1:exon

CLDN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CLDN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: claudin-4
translation: MASMGLQVLGIALSVIGWLASILCCALPMWRETAFIGNNIVVAQIIWEGLWMNCVVQSTGQMQCKVYDSVLALPQDLQAARAMVVVAIILAILGTLLAVTGGKCTNCVEDDTAKAKVMILSGIIFIVAGTLILIPISWSANTIIQDFYNPLVTNSQKRDLGSSLYVGWVASALLLLGGVILCCTCPPRAEKPYAAKFTAARSLPDSNYV
SIO_010081: CLDN4
subclass of: SO_0000673
so part of: CLDN4
location: complement(2656587..2657216)
location: region:2656587-2657216:-1
so has part: feature:2656587-2657216:-1:exon

XP_008500141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2656587-2657216:-1:exon

LOC103535819
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103535819
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2663787..2664657
location: region:2663787-2664657:1
so has part: feature:2663787-2664657:1:exon
subclass of: SO_0000010

103535819
type: Gene
SIO_000068: ncbigene

position:2663787:1
position: 2663787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2664657:1
position: 2664657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2663787-2664657:1:exon

LOC103535819
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103535819
product: claudin-3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 66 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008501921.2
SIO_010081: LOC103535819
subclass of: SO_0000673
so part of: LOC103535819
location: 2663787..2664657
location: region:2663787-2664657:1
so has part: feature:2663787-2664657:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2663787-2664657:1:exon

LOC103535819
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103535819
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: claudin-3-like
translation: MSMGLEIGGVALSVLGWLCSIICCALPMWRVTAFIGNNIVTAQIIWEGLWMNCVVQSTGQMQCKVYDSMLALPQDLQAARALLVVAIVLAVLGLMVAIVGAQCTRCVEDESTKAKITIVSGVIFLLSGVMNLIPVSWSANTIIRDFYNPLVIDAQKRELGTSLYVGWAASALLMLGGALLCCSCPPKDDRYPTGKVAYSAPRSAVTSYDKRNYV
SIO_010081: LOC103535819
subclass of: SO_0000673
so part of: LOC103535819
location: 2663923..2664567
location: region:2663923-2664567:1
so has part: feature:2663923-2664567:1:exon

XP_008500143.1
type: Protein
SIO_000068: ncbiprotein

position:2663923:1
position: 2663923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2664567:1
position: 2664567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2663923-2664567:1:exon

ABHD11
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ABHD11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2665734..2668201
location: region:2665734-2668201:1
so has part: feature:2665734-2668201:1:exon
subclass of: SO_0000010

103535846
type: Gene
SIO_000068: ncbigene

position:2665734:1
position: 2665734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2668201:1
position: 2668201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2665734-2668201:1:exon

ABHD11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ABHD11
product: abhydrolase domain containing 11
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030462761.1
SIO_010081: ABHD11
subclass of: SO_0000673
so part of: ABHD11
location: join(2665734..2665810,2665998..2666133,2666210..2666383,2666762..2666932,2667185..2667365,2667668..2668201)
location: region:2665734-2668201:1
so has part: feature:2665734-2665810:1:exon
so has part: feature:2665998-2666133:1:exon
so has part: feature:2666210-2666383:1:exon
so has part: feature:2666762-2666932:1:exon
so has part: feature:2667185-2667365:1:exon
so has part: feature:2667668-2668201:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2665734-2665810:1:exon

position:2665810:1
position: 2665810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2665998-2666133:1:exon

position:2665998:1
position: 2665998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2666133:1
position: 2666133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2666210-2666383:1:exon

position:2666210:1
position: 2666210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2666383:1
position: 2666383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2666762-2666932:1:exon

position:2666762:1
position: 2666762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2666932:1
position: 2666932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2667185-2667365:1:exon

position:2667185:1
position: 2667185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2667365:1
position: 2667365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2667668-2668201:1:exon

position:2667668:1
position: 2667668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ABHD11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ABHD11
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein ABHD11
translation: MTYEAMSLDVQQLLTRLGITKCILLGHSMGGKTAMTLALQQPDLVERLISVDISPAITTPVSEFSAYISAMKSVKIPDGLSRSAARQMADDQLRSVVQHPQVRQFLLTNLVEVXGRCVWRVNPGGHFPPLVRYHELPVFHKSYPGPALFLGGSNSPYISSQDYPEIQRLFPKADVQYIEGAGHIVHQDKFEEFITAVVKFLALP
SIO_010081: ABHD11
subclass of: SO_0000673
so part of: ABHD11
location: join(2666261..2666383,2666762..2666932,2667185..2667365,2667668..2667806)
location: region:2666261-2667806:1
so has part: feature:2666261-2666383:1:exon
so has part: feature:2666762-2666932:1:exon
so has part: feature:2667185-2667365:1:exon
so has part: feature:2667668-2667806:1:exon

XP_030318621.1
type: Protein
SIO_000068: ncbiprotein

position:2666261:1
position: 2666261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2667806:1
position: 2667806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2666261-2666383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2666762-2666932:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2667185-2667365:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2667668-2667806:1:exon

LOC103535847
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103535847
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2668401..2672185)
location: region:2668401-2672185:-1
so has part: feature:2668401-2672185:-1:exon
subclass of: SO_0000010

103535847
type: Gene
SIO_000068: ncbigene

position:2668401:-1
position: 2668401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2672185:-1
position: 2672185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2668401-2672185:-1:exon

LOC103535847
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103535847
product: caspase-1-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 49% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030462662.1
SIO_010081: LOC103535847
subclass of: SO_0000673
so part of: LOC103535847
location: complement(join(2668401..2668721,2669061..2669147,2669558..2669673,2669781..2669853,2670058..2670284,2670862..2670941,2671990..2672185))
location: region:2668401-2672185:-1
so has part: feature:2671990-2672185:-1:exon
so has part: feature:2670862-2670941:-1:exon
so has part: feature:2670058-2670284:-1:exon
so has part: feature:2669781-2669853:-1:exon
so has part: feature:2669558-2669673:-1:exon
so has part: feature:2669061-2669147:-1:exon
so has part: feature:2668401-2668721:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2671990-2672185:-1:exon

position:2671990:-1
position: 2671990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2670862-2670941:-1:exon

position:2670862:-1
position: 2670862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2670941:-1
position: 2670941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2670058-2670284:-1:exon

position:2670058:-1
position: 2670058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2670284:-1
position: 2670284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2669781-2669853:-1:exon

position:2669781:-1
position: 2669781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2669853:-1
position: 2669853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2669558-2669673:-1:exon

position:2669558:-1
position: 2669558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2669673:-1
position: 2669673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2669061-2669147:-1:exon

position:2669061:-1
position: 2669061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2669147:-1
position: 2669147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2668401-2668721:-1:exon

position:2668721:-1
position: 2668721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103535847
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103535847
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: caspase-1-like
translation: MENPGWMRLQLPAPGQGSARESRSQVQPQTGLEMDSEGMQVPGRGRELPTSGLESCRRLPASHPMGLPIGIQWIQQYSLSKYQHIRDTEGDQGMATVMKDLADGKEHLTSDSTFLVFMSHGVGAGLCGTKRTSKITNILTLNTIYEKFNKHCQANPKRSLSIQSCCGGLKDDATCEVHLESDFATFKSLHIWPLAVPSIQCLGTTWAQYLGTTPAQPLEKAVSSDARAQGYTVSRRKQATASLFIXNHTYNSNLQEHFQQVQYSFGKFPWQLLSQEQTTVFKKLYLFPGH
SIO_010081: LOC103535847
subclass of: SO_0000673
so part of: LOC103535847
location: complement(join(2668629..2668721,2669061..2669147,2669558..2669673,2669781..2669853,2670058..2670284,2670862..2670941,2671990..2672185))
location: region:2668629-2672185:-1
so has part: feature:2671990-2672185:-1:exon
so has part: feature:2670862-2670941:-1:exon
so has part: feature:2670058-2670284:-1:exon
so has part: feature:2669781-2669853:-1:exon
so has part: feature:2669558-2669673:-1:exon
so has part: feature:2669061-2669147:-1:exon
so has part: feature:2668629-2668721:-1:exon

XP_030318522.1
type: Protein
SIO_000068: ncbiprotein

position:2668629:-1
position: 2668629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2671990-2672185:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2670862-2670941:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2670058-2670284:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2669781-2669853:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2669558-2669673:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2669061-2669147:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2668629-2668721:-1:exon

MTMR4
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: MTMR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2672983..2729566
location: region:2672983-2729566:1
so has part: feature:2672983-2729566:1:exon
subclass of: SO_0000010

103535848
type: Gene
SIO_000068: ncbigene

position:2672983:1
position: 2672983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2729566:1
position: 2729566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2672983-2729566:1:exon

MTMR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MTMR4
product: myotubularin related protein 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 ESTs, 4 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030462713.1
SIO_010081: MTMR4
subclass of: SO_0000673
so part of: MTMR4
location: join(2672983..2673047,2693587..2693660,2703262..2703351,2705508..2705624,2706259..2706341,2706561..2706727,2708104..2708200,2716344..2716457,2720790..2720986,2721551..2721679,2721982..2722093,2722510..2722705,2723188..2723373,2724137..2724307,2724433..2724587,2724912..2726148,2726487..2726597,2726877..2726965,2727368..2729566)
location: region:2672983-2729566:1
so has part: feature:2672983-2673047:1:exon
so has part: feature:2693587-2693660:1:exon
so has part: feature:2703262-2703351:1:exon
so has part: feature:2705508-2705624:1:exon
so has part: feature:2706259-2706341:1:exon
so has part: feature:2706561-2706727:1:exon
so has part: feature:2708104-2708200:1:exon
so has part: feature:2716344-2716457:1:exon
so has part: feature:2720790-2720986:1:exon
so has part: feature:2721551-2721679:1:exon
so has part: feature:2721982-2722093:1:exon
so has part: feature:2722510-2722705:1:exon
so has part: feature:2723188-2723373:1:exon
so has part: feature:2724137-2724307:1:exon
so has part: feature:2724433-2724587:1:exon
so has part: feature:2724912-2726148:1:exon
so has part: feature:2726487-2726597:1:exon
so has part: feature:2726877-2726965:1:exon
so has part: feature:2727368-2729566:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2672983-2673047:1:exon

position:2673047:1
position: 2673047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2693587-2693660:1:exon

position:2693587:1
position: 2693587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2693660:1
position: 2693660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2703262-2703351:1:exon

position:2703262:1
position: 2703262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2703351:1
position: 2703351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2705508-2705624:1:exon

position:2705508:1
position: 2705508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2705624:1
position: 2705624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2706259-2706341:1:exon

position:2706259:1
position: 2706259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2706341:1
position: 2706341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2706561-2706727:1:exon

position:2706561:1
position: 2706561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2706727:1
position: 2706727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2708104-2708200:1:exon

position:2708104:1
position: 2708104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2708200:1
position: 2708200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2716344-2716457:1:exon

position:2716344:1
position: 2716344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2716457:1
position: 2716457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2720790-2720986:1:exon

position:2720790:1
position: 2720790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2720986:1
position: 2720986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2721551-2721679:1:exon

position:2721551:1
position: 2721551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2721679:1
position: 2721679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2721982-2722093:1:exon

position:2721982:1
position: 2721982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2722093:1
position: 2722093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2722510-2722705:1:exon

position:2722510:1
position: 2722510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2722705:1
position: 2722705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2723188-2723373:1:exon

position:2723188:1
position: 2723188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2723373:1
position: 2723373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2724137-2724307:1:exon

position:2724137:1
position: 2724137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2724307:1
position: 2724307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2724433-2724587:1:exon

position:2724433:1
position: 2724433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2724587:1
position: 2724587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2724912-2726148:1:exon

position:2724912:1
position: 2724912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2726148:1
position: 2726148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2726487-2726597:1:exon

position:2726487:1
position: 2726487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2726597:1
position: 2726597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2726877-2726965:1:exon

position:2726877:1
position: 2726877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2726965:1
position: 2726965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2727368-2729566:1:exon

position:2727368:1
position: 2727368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MTMR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MTMR4
product: myotubularin related protein 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 ESTs, 3 long SRA reads, 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030462714.1
SIO_010081: MTMR4
subclass of: SO_0000673
so part of: MTMR4
location: join(2673036..2673115,2693587..2693660,2703262..2703351,2705508..2705624,2706259..2706341,2706561..2706727,2708104..2708200,2716344..2716457,2720790..2720986,2721551..2721679,2721982..2722093,2722510..2722705,2723188..2723373,2724137..2724307,2724433..2724587,2724912..2726148,2726487..2726597,2726877..2726965,2727368..2729566)
location: region:2673036-2729566:1
so has part: feature:2673036-2673115:1:exon
so has part: feature:2693587-2693660:1:exon
so has part: feature:2703262-2703351:1:exon
so has part: feature:2705508-2705624:1:exon
so has part: feature:2706259-2706341:1:exon
so has part: feature:2706561-2706727:1:exon
so has part: feature:2708104-2708200:1:exon
so has part: feature:2716344-2716457:1:exon
so has part: feature:2720790-2720986:1:exon
so has part: feature:2721551-2721679:1:exon
so has part: feature:2721982-2722093:1:exon
so has part: feature:2722510-2722705:1:exon
so has part: feature:2723188-2723373:1:exon
so has part: feature:2724137-2724307:1:exon
so has part: feature:2724433-2724587:1:exon
so has part: feature:2724912-2726148:1:exon
so has part: feature:2726487-2726597:1:exon
so has part: feature:2726877-2726965:1:exon
so has part: feature:2727368-2729566:1:exon

position:2673036:1
position: 2673036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2673036-2673115:1:exon

position:2673115:1
position: 2673115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2693587-2693660:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2703262-2703351:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2705508-2705624:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2706259-2706341:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2706561-2706727:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2708104-2708200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2716344-2716457:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2720790-2720986:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2721551-2721679:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2721982-2722093:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2722510-2722705:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2723188-2723373:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2724137-2724307:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2724433-2724587:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2724912-2726148:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2726487-2726597:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2726877-2726965:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2727368-2729566:1:exon

MTMR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MTMR4
product: myotubularin related protein 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 ESTs, 2 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030462715.1
SIO_010081: MTMR4
subclass of: SO_0000673
so part of: MTMR4
location: join(2677768..2677965,2693587..2693660,2703262..2703351,2705508..2705624,2706259..2706341,2706561..2706727,2708104..2708200,2716344..2716457,2720790..2720986,2721551..2721679,2721982..2722093,2722510..2722705,2723188..2723373,2724137..2724307,2724433..2724587,2724912..2726148,2726487..2726597,2726877..2726965,2727368..2729566)
location: region:2677768-2729566:1
so has part: feature:2677768-2677965:1:exon
so has part: feature:2693587-2693660:1:exon
so has part: feature:2703262-2703351:1:exon
so has part: feature:2705508-2705624:1:exon
so has part: feature:2706259-2706341:1:exon
so has part: feature:2706561-2706727:1:exon
so has part: feature:2708104-2708200:1:exon
so has part: feature:2716344-2716457:1:exon
so has part: feature:2720790-2720986:1:exon
so has part: feature:2721551-2721679:1:exon
so has part: feature:2721982-2722093:1:exon
so has part: feature:2722510-2722705:1:exon
so has part: feature:2723188-2723373:1:exon
so has part: feature:2724137-2724307:1:exon
so has part: feature:2724433-2724587:1:exon
so has part: feature:2724912-2726148:1:exon
so has part: feature:2726487-2726597:1:exon
so has part: feature:2726877-2726965:1:exon
so has part: feature:2727368-2729566:1:exon

position:2677768:1
position: 2677768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2677768-2677965:1:exon

position:2677965:1
position: 2677965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2693587-2693660:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2703262-2703351:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2705508-2705624:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2706259-2706341:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2706561-2706727:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2708104-2708200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2716344-2716457:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2720790-2720986:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2721551-2721679:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2721982-2722093:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2722510-2722705:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2723188-2723373:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2724137-2724307:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2724433-2724587:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2724912-2726148:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2726487-2726597:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2726877-2726965:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2727368-2729566:1:exon

MTMR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MTMR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 4 isoform X2
translation: MGEEGPPSLEYIQAKDLFPPKELVKEEESLQVPFTVLQGEGVEYLGHANDAVIAISNYRLHIKFKDSVINVPLRMMESVECRDMFQLHIICKDSKVIRCHFSTFKQCQEWLKRLTRAIARPAKPEDLFAFAYHAWCLGVCVDEEDQHAHLCRPGDHVRFRFEMELVRMGFDLQNVWRVSDINNNYKLCSSYPQKLLVPVWITDKELENVASFRSWKRIPVVVYRHARNGAVIARCSQPEISWWGWRNADDEYLVTSIAKACALNPGVKVPGGMLQNGSSDGSEACDTDFDSSLTACSGVENAGTPQKLLILDARSYTAAVANRAKGGGCECEEYYPNCEVVFMGMANIHSIRNSFQYLRAVCSQVPDPSNWLSALESTKWLQHLSVMLKAAVLVSSAVDREGRPVLVHCSDGWDRTPQIVALAKILLDPYYRTMEGFQVLVESDWLDFGHKFGDRCGHQEKVEDQNEQCPVFLQWLDAVHQLLKQFPCLFEFNEAFLVKLVQHTYSCLYGTFLGNSPCEREMHNIYKRTCSVWSLLRAGNKNFHNLLYMPGSEQVLHPVCHVRALHVWTAVYLPASSPHPLGQDDMDIYLPSGSQSQEFSGRSLDRLPKTRSMDDLLSACDSSSPLTRTSSDPNLNNHCQEVRVGLEPWHTSPEGAELHLGEDSVVASGETQQVEEQEDSPPLQAGSACHSHAEHSKRLSSWASVPASSISLEAEKGTGTDPEELGGTCAAPNASGQKNVDKVSSSSRKQLETHPREPLKATGMTANGGGCPKRNTICHDIPSQESLAPSAPCQDIPGPAPGIPCPSEANSKGDSGKSMPCEEPCQPGRVPLEQWRKPISQSQSSEFSFLGSNWDSFQGMVTSLPGGEPVPRHLLSYGCCSKKLSSKPLRAPALCLSSQWAAREGAKPSLCSGHAGTHLSGPAGKPSCSWLPCHLKQGSGPKHLPPKCPSPVPPLYLDDDGLPFPTDVIQHRLRQIEAGYKQEVEQLRRQVRELQLRLDIRHCSASPAEPPMDYEDDFTCLKESDGSDTEDFCSNHSEDCFSEASWEPVDKKETEVTRWVPDHMASHCFNCDCEFWLAKRRHHCRNCGNVFCAGCCHLKLPIPDQQLYDPVLVCNSCFDHIQVSRARELMSQHLKKPIATASS
SIO_010081: MTMR4
subclass of: SO_0000673
so part of: MTMR4
location: join(2693658..2693660,2703262..2703351,2705508..2705624,2706259..2706341,2706561..2706727,2708104..2708200,2716344..2716457,2720790..2720986,2721551..2721679,2721982..2722093,2722510..2722705,2723188..2723373,2724137..2724307,2724433..2724587,2724912..2726148,2726487..2726597,2726877..2726965,2727368..2727545)
location: region:2693658-2727545:1
so has part: feature:2693658-2693660:1:exon
so has part: feature:2703262-2703351:1:exon
so has part: feature:2705508-2705624:1:exon
so has part: feature:2706259-2706341:1:exon
so has part: feature:2706561-2706727:1:exon
so has part: feature:2708104-2708200:1:exon
so has part: feature:2716344-2716457:1:exon
so has part: feature:2720790-2720986:1:exon
so has part: feature:2721551-2721679:1:exon
so has part: feature:2721982-2722093:1:exon
so has part: feature:2722510-2722705:1:exon
so has part: feature:2723188-2723373:1:exon
so has part: feature:2724137-2724307:1:exon
so has part: feature:2724433-2724587:1:exon
so has part: feature:2724912-2726148:1:exon
so has part: feature:2726487-2726597:1:exon
so has part: feature:2726877-2726965:1:exon
so has part: feature:2727368-2727545:1:exon

XP_030318573.1
type: Protein
SIO_000068: ncbiprotein

position:2693658:1
position: 2693658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2727545:1
position: 2727545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2693658-2693660:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2703262-2703351:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2705508-2705624:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2706259-2706341:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2706561-2706727:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2708104-2708200:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2716344-2716457:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2720790-2720986:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2721551-2721679:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2721982-2722093:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2722510-2722705:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2723188-2723373:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2724137-2724307:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2724433-2724587:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2724912-2726148:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2726487-2726597:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2726877-2726965:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2727368-2727545:1:exon

MTMR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MTMR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 4 isoform X2
translation: MGEEGPPSLEYIQAKDLFPPKELVKEEESLQVPFTVLQGEGVEYLGHANDAVIAISNYRLHIKFKDSVINVPLRMMESVECRDMFQLHIICKDSKVIRCHFSTFKQCQEWLKRLTRAIARPAKPEDLFAFAYHAWCLGVCVDEEDQHAHLCRPGDHVRFRFEMELVRMGFDLQNVWRVSDINNNYKLCSSYPQKLLVPVWITDKELENVASFRSWKRIPVVVYRHARNGAVIARCSQPEISWWGWRNADDEYLVTSIAKACALNPGVKVPGGMLQNGSSDGSEACDTDFDSSLTACSGVENAGTPQKLLILDARSYTAAVANRAKGGGCECEEYYPNCEVVFMGMANIHSIRNSFQYLRAVCSQVPDPSNWLSALESTKWLQHLSVMLKAAVLVSSAVDREGRPVLVHCSDGWDRTPQIVALAKILLDPYYRTMEGFQVLVESDWLDFGHKFGDRCGHQEKVEDQNEQCPVFLQWLDAVHQLLKQFPCLFEFNEAFLVKLVQHTYSCLYGTFLGNSPCEREMHNIYKRTCSVWSLLRAGNKNFHNLLYMPGSEQVLHPVCHVRALHVWTAVYLPASSPHPLGQDDMDIYLPSGSQSQEFSGRSLDRLPKTRSMDDLLSACDSSSPLTRTSSDPNLNNHCQEVRVGLEPWHTSPEGAELHLGEDSVVASGETQQVEEQEDSPPLQAGSACHSHAEHSKRLSSWASVPASSISLEAEKGTGTDPEELGGTCAAPNASGQKNVDKVSSSSRKQLETHPREPLKATGMTANGGGCPKRNTICHDIPSQESLAPSAPCQDIPGPAPGIPCPSEANSKGDSGKSMPCEEPCQPGRVPLEQWRKPISQSQSSEFSFLGSNWDSFQGMVTSLPGGEPVPRHLLSYGCCSKKLSSKPLRAPALCLSSQWAAREGAKPSLCSGHAGTHLSGPAGKPSCSWLPCHLKQGSGPKHLPPKCPSPVPPLYLDDDGLPFPTDVIQHRLRQIEAGYKQEVEQLRRQVRELQLRLDIRHCSASPAEPPMDYEDDFTCLKESDGSDTEDFCSNHSEDCFSEASWEPVDKKETEVTRWVPDHMASHCFNCDCEFWLAKRRHHCRNCGNVFCAGCCHLKLPIPDQQLYDPVLVCNSCFDHIQVSRARELMSQHLKKPIATASS
SIO_010081: MTMR4
subclass of: SO_0000673
so part of: MTMR4
location: join(2693658..2693660,2703262..2703351,2705508..2705624,2706259..2706341,2706561..2706727,2708104..2708200,2716344..2716457,2720790..2720986,2721551..2721679,2721982..2722093,2722510..2722705,2723188..2723373,2724137..2724307,2724433..2724587,2724912..2726148,2726487..2726597,2726877..2726965,2727368..2727545)
location: region:2693658-2727545:1
so has part: feature:2693658-2693660:1:exon
so has part: feature:2703262-2703351:1:exon
so has part: feature:2705508-2705624:1:exon
so has part: feature:2706259-2706341:1:exon
so has part: feature:2706561-2706727:1:exon
so has part: feature:2708104-2708200:1:exon
so has part: feature:2716344-2716457:1:exon
so has part: feature:2720790-2720986:1:exon
so has part: feature:2721551-2721679:1:exon
so has part: feature:2721982-2722093:1:exon
so has part: feature:2722510-2722705:1:exon
so has part: feature:2723188-2723373:1:exon
so has part: feature:2724137-2724307:1:exon
so has part: feature:2724433-2724587:1:exon
so has part: feature:2724912-2726148:1:exon
so has part: feature:2726487-2726597:1:exon
so has part: feature:2726877-2726965:1:exon
so has part: feature:2727368-2727545:1:exon

XP_030318574.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2693658-2693660:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2703262-2703351:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2705508-2705624:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2706259-2706341:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2706561-2706727:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2708104-2708200:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2716344-2716457:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2720790-2720986:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2721551-2721679:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2721982-2722093:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2722510-2722705:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2723188-2723373:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2724137-2724307:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2724433-2724587:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2724912-2726148:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2726487-2726597:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2726877-2726965:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2727368-2727545:1:exon

MTMR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MTMR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 4 isoform X2
translation: MGEEGPPSLEYIQAKDLFPPKELVKEEESLQVPFTVLQGEGVEYLGHANDAVIAISNYRLHIKFKDSVINVPLRMMESVECRDMFQLHIICKDSKVIRCHFSTFKQCQEWLKRLTRAIARPAKPEDLFAFAYHAWCLGVCVDEEDQHAHLCRPGDHVRFRFEMELVRMGFDLQNVWRVSDINNNYKLCSSYPQKLLVPVWITDKELENVASFRSWKRIPVVVYRHARNGAVIARCSQPEISWWGWRNADDEYLVTSIAKACALNPGVKVPGGMLQNGSSDGSEACDTDFDSSLTACSGVENAGTPQKLLILDARSYTAAVANRAKGGGCECEEYYPNCEVVFMGMANIHSIRNSFQYLRAVCSQVPDPSNWLSALESTKWLQHLSVMLKAAVLVSSAVDREGRPVLVHCSDGWDRTPQIVALAKILLDPYYRTMEGFQVLVESDWLDFGHKFGDRCGHQEKVEDQNEQCPVFLQWLDAVHQLLKQFPCLFEFNEAFLVKLVQHTYSCLYGTFLGNSPCEREMHNIYKRTCSVWSLLRAGNKNFHNLLYMPGSEQVLHPVCHVRALHVWTAVYLPASSPHPLGQDDMDIYLPSGSQSQEFSGRSLDRLPKTRSMDDLLSACDSSSPLTRTSSDPNLNNHCQEVRVGLEPWHTSPEGAELHLGEDSVVASGETQQVEEQEDSPPLQAGSACHSHAEHSKRLSSWASVPASSISLEAEKGTGTDPEELGGTCAAPNASGQKNVDKVSSSSRKQLETHPREPLKATGMTANGGGCPKRNTICHDIPSQESLAPSAPCQDIPGPAPGIPCPSEANSKGDSGKSMPCEEPCQPGRVPLEQWRKPISQSQSSEFSFLGSNWDSFQGMVTSLPGGEPVPRHLLSYGCCSKKLSSKPLRAPALCLSSQWAAREGAKPSLCSGHAGTHLSGPAGKPSCSWLPCHLKQGSGPKHLPPKCPSPVPPLYLDDDGLPFPTDVIQHRLRQIEAGYKQEVEQLRRQVRELQLRLDIRHCSASPAEPPMDYEDDFTCLKESDGSDTEDFCSNHSEDCFSEASWEPVDKKETEVTRWVPDHMASHCFNCDCEFWLAKRRHHCRNCGNVFCAGCCHLKLPIPDQQLYDPVLVCNSCFDHIQVSRARELMSQHLKKPIATASS
SIO_010081: MTMR4
subclass of: SO_0000673
so part of: MTMR4
location: join(2693658..2693660,2703262..2703351,2705508..2705624,2706259..2706341,2706561..2706727,2708104..2708200,2716344..2716457,2720790..2720986,2721551..2721679,2721982..2722093,2722510..2722705,2723188..2723373,2724137..2724307,2724433..2724587,2724912..2726148,2726487..2726597,2726877..2726965,2727368..2727545)
location: region:2693658-2727545:1
so has part: feature:2693658-2693660:1:exon
so has part: feature:2703262-2703351:1:exon
so has part: feature:2705508-2705624:1:exon
so has part: feature:2706259-2706341:1:exon
so has part: feature:2706561-2706727:1:exon
so has part: feature:2708104-2708200:1:exon
so has part: feature:2716344-2716457:1:exon
so has part: feature:2720790-2720986:1:exon
so has part: feature:2721551-2721679:1:exon
so has part: feature:2721982-2722093:1:exon
so has part: feature:2722510-2722705:1:exon
so has part: feature:2723188-2723373:1:exon
so has part: feature:2724137-2724307:1:exon
so has part: feature:2724433-2724587:1:exon
so has part: feature:2724912-2726148:1:exon
so has part: feature:2726487-2726597:1:exon
so has part: feature:2726877-2726965:1:exon
so has part: feature:2727368-2727545:1:exon

XP_030318575.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2693658-2693660:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2703262-2703351:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2705508-2705624:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2706259-2706341:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2706561-2706727:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2708104-2708200:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2716344-2716457:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2720790-2720986:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2721551-2721679:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2721982-2722093:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2722510-2722705:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2723188-2723373:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2724137-2724307:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2724433-2724587:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2724912-2726148:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2726487-2726597:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2726877-2726965:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2727368-2727545:1:exon

MTMR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MTMR4
product: myotubularin related protein 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 ESTs, 3 long SRA reads, 16 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030462712.1
SIO_010081: MTMR4
subclass of: SO_0000673
so part of: MTMR4
location: join(2700775..2701062,2703262..2703351,2705508..2705624,2706259..2706341,2706561..2706727,2708104..2708200,2716344..2716457,2720790..2720986,2721551..2721679,2721982..2722093,2722510..2722705,2723188..2723373,2724137..2724307,2724433..2724587,2724912..2726148,2726487..2726597,2726877..2726965,2727368..2729566)
location: region:2700775-2729566:1
so has part: feature:2700775-2701062:1:exon
so has part: feature:2703262-2703351:1:exon
so has part: feature:2705508-2705624:1:exon
so has part: feature:2706259-2706341:1:exon
so has part: feature:2706561-2706727:1:exon
so has part: feature:2708104-2708200:1:exon
so has part: feature:2716344-2716457:1:exon
so has part: feature:2720790-2720986:1:exon
so has part: feature:2721551-2721679:1:exon
so has part: feature:2721982-2722093:1:exon
so has part: feature:2722510-2722705:1:exon
so has part: feature:2723188-2723373:1:exon
so has part: feature:2724137-2724307:1:exon
so has part: feature:2724433-2724587:1:exon
so has part: feature:2724912-2726148:1:exon
so has part: feature:2726487-2726597:1:exon
so has part: feature:2726877-2726965:1:exon
so has part: feature:2727368-2729566:1:exon

position:2700775:1
position: 2700775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2700775-2701062:1:exon

position:2701062:1
position: 2701062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2703262-2703351:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2705508-2705624:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2706259-2706341:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2706561-2706727:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2708104-2708200:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2716344-2716457:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2720790-2720986:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2721551-2721679:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2721982-2722093:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2722510-2722705:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2723188-2723373:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2724137-2724307:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2724433-2724587:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2724912-2726148:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2726487-2726597:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2726877-2726965:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2727368-2729566:1:exon

MTMR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MTMR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 4 isoform X1
translation: MNMSLPGRVSCSMLNCFGEEGPPSLEYIQAKDLFPPKELVKEEESLQVPFTVLQGEGVEYLGHANDAVIAISNYRLHIKFKDSVINVPLRMMESVECRDMFQLHIICKDSKVIRCHFSTFKQCQEWLKRLTRAIARPAKPEDLFAFAYHAWCLGVCVDEEDQHAHLCRPGDHVRFRFEMELVRMGFDLQNVWRVSDINNNYKLCSSYPQKLLVPVWITDKELENVASFRSWKRIPVVVYRHARNGAVIARCSQPEISWWGWRNADDEYLVTSIAKACALNPGVKVPGGMLQNGSSDGSEACDTDFDSSLTACSGVENAGTPQKLLILDARSYTAAVANRAKGGGCECEEYYPNCEVVFMGMANIHSIRNSFQYLRAVCSQVPDPSNWLSALESTKWLQHLSVMLKAAVLVSSAVDREGRPVLVHCSDGWDRTPQIVALAKILLDPYYRTMEGFQVLVESDWLDFGHKFGDRCGHQEKVEDQNEQCPVFLQWLDAVHQLLKQFPCLFEFNEAFLVKLVQHTYSCLYGTFLGNSPCEREMHNIYKRTCSVWSLLRAGNKNFHNLLYMPGSEQVLHPVCHVRALHVWTAVYLPASSPHPLGQDDMDIYLPSGSQSQEFSGRSLDRLPKTRSMDDLLSACDSSSPLTRTSSDPNLNNHCQEVRVGLEPWHTSPEGAELHLGEDSVVASGETQQVEEQEDSPPLQAGSACHSHAEHSKRLSSWASVPASSISLEAEKGTGTDPEELGGTCAAPNASGQKNVDKVSSSSRKQLETHPREPLKATGMTANGGGCPKRNTICHDIPSQESLAPSAPCQDIPGPAPGIPCPSEANSKGDSGKSMPCEEPCQPGRVPLEQWRKPISQSQSSEFSFLGSNWDSFQGMVTSLPGGEPVPRHLLSYGCCSKKLSSKPLRAPALCLSSQWAAREGAKPSLCSGHAGTHLSGPAGKPSCSWLPCHLKQGSGPKHLPPKCPSPVPPLYLDDDGLPFPTDVIQHRLRQIEAGYKQEVEQLRRQVRELQLRLDIRHCSASPAEPPMDYEDDFTCLKESDGSDTEDFCSNHSEDCFSEASWEPVDKKETEVTRWVPDHMASHCFNCDCEFWLAKRRHHCRNCGNVFCAGCCHLKLPIPDQQLYDPVLVCNSCFDHIQVSRARELMSQHLKKPIATASS
SIO_010081: MTMR4
subclass of: SO_0000673
so part of: MTMR4
location: join(2701012..2701062,2703262..2703351,2705508..2705624,2706259..2706341,2706561..2706727,2708104..2708200,2716344..2716457,2720790..2720986,2721551..2721679,2721982..2722093,2722510..2722705,2723188..2723373,2724137..2724307,2724433..2724587,2724912..2726148,2726487..2726597,2726877..2726965,2727368..2727545)
location: region:2701012-2727545:1
so has part: feature:2701012-2701062:1:exon
so has part: feature:2703262-2703351:1:exon
so has part: feature:2705508-2705624:1:exon
so has part: feature:2706259-2706341:1:exon
so has part: feature:2706561-2706727:1:exon
so has part: feature:2708104-2708200:1:exon
so has part: feature:2716344-2716457:1:exon
so has part: feature:2720790-2720986:1:exon
so has part: feature:2721551-2721679:1:exon
so has part: feature:2721982-2722093:1:exon
so has part: feature:2722510-2722705:1:exon
so has part: feature:2723188-2723373:1:exon
so has part: feature:2724137-2724307:1:exon
so has part: feature:2724433-2724587:1:exon
so has part: feature:2724912-2726148:1:exon
so has part: feature:2726487-2726597:1:exon
so has part: feature:2726877-2726965:1:exon
so has part: feature:2727368-2727545:1:exon

XP_030318572.1
type: Protein
SIO_000068: ncbiprotein

position:2701012:1
position: 2701012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2701012-2701062:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2703262-2703351:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2705508-2705624:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2706259-2706341:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2706561-2706727:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2708104-2708200:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2716344-2716457:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2720790-2720986:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2721551-2721679:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2721982-2722093:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2722510-2722705:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2723188-2723373:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2724137-2724307:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2724433-2724587:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2724912-2726148:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2726487-2726597:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2726877-2726965:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2727368-2727545:1:exon

RNF43
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: RNF43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2746472..2811598
location: region:2746472-2811598:1
so has part: feature:2746472-2811598:1:exon
subclass of: SO_0000010

103535849
type: Gene
SIO_000068: ncbigene

position:2746472:1
position: 2746472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2811598:1
position: 2811598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2746472-2811598:1:exon

RNF43
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RNF43
product: ring finger protein 43, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030462728.1
SIO_010081: RNF43
subclass of: SO_0000673
so part of: RNF43
location: join(2746472..2747578,2787680..2787802,2796571..2796645,2797281..2797412,2797929..2798030,2798672..2798827,2799389..2799491,2799911..2801194,2808724..2811598)
location: region:2746472-2811598:1
so has part: feature:2746472-2747578:1:exon
so has part: feature:2787680-2787802:1:exon
so has part: feature:2796571-2796645:1:exon
so has part: feature:2797281-2797412:1:exon
so has part: feature:2797929-2798030:1:exon
so has part: feature:2798672-2798827:1:exon
so has part: feature:2799389-2799491:1:exon
so has part: feature:2799911-2801194:1:exon
so has part: feature:2808724-2811598:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2746472-2747578:1:exon

position:2747578:1
position: 2747578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2787680-2787802:1:exon

position:2787680:1
position: 2787680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2787802:1
position: 2787802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2796571-2796645:1:exon

position:2796571:1
position: 2796571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2796645:1
position: 2796645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2797281-2797412:1:exon

position:2797281:1
position: 2797281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2797412:1
position: 2797412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2797929-2798030:1:exon

position:2797929:1
position: 2797929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2798030:1
position: 2798030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2798672-2798827:1:exon

position:2798672:1
position: 2798672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2798827:1
position: 2798827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2799389-2799491:1:exon

position:2799389:1
position: 2799389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2799491:1
position: 2799491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2799911-2801194:1:exon

position:2799911:1
position: 2799911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2801194:1
position: 2801194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2808724-2811598:1:exon

position:2808724:1
position: 2808724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RNF43
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RNF43
product: ring finger protein 43, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030462726.1
SIO_010081: RNF43
subclass of: SO_0000673
so part of: RNF43
location: join(2746472..2747578,2787680..2787802,2796571..2796645,2797281..2797412,2797929..2798030,2798672..2798827,2799389..2799491,2799911..2801440,2808389..2808716)
location: region:2746472-2808716:1
so has part: feature:2746472-2747578:1:exon
so has part: feature:2787680-2787802:1:exon
so has part: feature:2796571-2796645:1:exon
so has part: feature:2797281-2797412:1:exon
so has part: feature:2797929-2798030:1:exon
so has part: feature:2798672-2798827:1:exon
so has part: feature:2799389-2799491:1:exon
so has part: feature:2799911-2801440:1:exon
so has part: feature:2808389-2808716:1:exon

position:2808716:1
position: 2808716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2746472-2747578:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2787680-2787802:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2796571-2796645:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2797281-2797412:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2797929-2798030:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2798672-2798827:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2799389-2799491:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2799911-2801440:1:exon

position:2801440:1
position: 2801440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2808389-2808716:1:exon

position:2808389:1
position: 2808389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RNF43
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RNF43
product: ring finger protein 43, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030462727.1
SIO_010081: RNF43
subclass of: SO_0000673
so part of: RNF43
location: join(2746472..2747578,2787680..2787802,2796571..2796645,2797281..2797412,2797929..2798030,2798672..2798827,2799389..2799491,2799911..2801431,2808389..2808716)
location: region:2746472-2808716:1
so has part: feature:2746472-2747578:1:exon
so has part: feature:2787680-2787802:1:exon
so has part: feature:2796571-2796645:1:exon
so has part: feature:2797281-2797412:1:exon
so has part: feature:2797929-2798030:1:exon
so has part: feature:2798672-2798827:1:exon
so has part: feature:2799389-2799491:1:exon
so has part: feature:2799911-2801431:1:exon
so has part: feature:2808389-2808716:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2746472-2747578:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2787680-2787802:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2796571-2796645:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2797281-2797412:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2797929-2798030:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2798672-2798827:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2799389-2799491:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2799911-2801431:1:exon

position:2801431:1
position: 2801431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2808389-2808716:1:exon

RNF43
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RNF43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF43 isoform X3
translation: MSAGPPLQLAVPWLWLLMATLQAGLGRTGLALAAAVESERAAAQKAIIRVIPLKVEPIILEGEFANVAEVTPAEGKLLQSHPLSLCNSSEDEHTESGFITIVKLEQPDRDPNPCLSLANKAKLAGERGARAILFDITDDESAADQLKKPRGLSQPVVLIRGHDAELLMGVVNKNREAHVKIEVKEPPAWPDYDVWILLTVVSTVVVIILIFVVRTKCQLNRTQDSLQQQTMQAIGQLATRKYQGRCRQASRWDSASSCSSAPVCAICLEEFSEGQELRIISCSHEFHRECVDPWLQQHHTCPLCMFNILVRDSVDQATAAGSRLAPQDMEPGRRLHLFRQHPGHALYHLPHAYPQRNLRSFPPEPAHGNLFFHSPELSQLDFGTIHYMPYRPATSLLTCGHPSPLAPSLLGQQHRNSSSVCGQTLPPQTTCSVQPQPPCLGLKAAPVQKQHRAPVLRRGFSHGHQHNSSGSGESYLTEHSGYLADGPGSDSSSGPCHGSSSDSMLNCTDISLQGIHGSCSTFRSSLSSDYDPFVYCSSEGPARDNGQEQLRPLREMRPRSLDLVVPGGAAPAKQQVLSHVHYHHHQHHHYRKDAECPPGQAGQGPGQRRSRYSGAKVGFHSSRTHRRTEKGHHCQQPLESSGVLKEAALAGQPTCPQQGQEPPHAPSTSPNRLNFSVDANRQAGTASTSLVPLPRRHSLQSRHHRRKRKCPLEPDPALLPEDSALPKACGAHIPHGHSAGELVE
SIO_010081: RNF43
subclass of: SO_0000673
so part of: RNF43
location: join(2747342..2747578,2787680..2787802,2796571..2796645,2797281..2797412,2797929..2798030,2798672..2798827,2799389..2799491,2799911..2801194,2808724..2808746)
location: region:2747342-2808746:1
so has part: feature:2747342-2747578:1:exon
so has part: feature:2787680-2787802:1:exon
so has part: feature:2796571-2796645:1:exon
so has part: feature:2797281-2797412:1:exon
so has part: feature:2797929-2798030:1:exon
so has part: feature:2798672-2798827:1:exon
so has part: feature:2799389-2799491:1:exon
so has part: feature:2799911-2801194:1:exon
so has part: feature:2808724-2808746:1:exon

XP_030318588.1
type: Protein
SIO_000068: ncbiprotein

position:2747342:1
position: 2747342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2808746:1
position: 2808746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2747342-2747578:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2787680-2787802:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2796571-2796645:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2797281-2797412:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2797929-2798030:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2798672-2798827:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2799389-2799491:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2799911-2801194:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2808724-2808746:1:exon

RNF43
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RNF43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF43 isoform X1
translation: MSAGPPLQLAVPWLWLLMATLQAGLGRTGLALAAAVESERAAAQKAIIRVIPLKVEPIILEGEFANVAEVTPAEGKLLQSHPLSLCNSSEDEHTESGFITIVKLEQPDRDPNPCLSLANKAKLAGERGARAILFDITDDESAADQLKKPRGLSQPVVLIRGHDAELLMGVVNKNREAHVKIEVKEPPAWPDYDVWILLTVVSTVVVIILIFVVRTKCQLNRTQDSLQQQTMQAIGQLATRKYQGRCRQASRWDSASSCSSAPVCAICLEEFSEGQELRIISCSHEFHRECVDPWLQQHHTCPLCMFNILVRDSVDQATAAGSRLAPQDMEPGRRLHLFRQHPGHALYHLPHAYPQRNLRSFPPEPAHGNLFFHSPELSQLDFGTIHYMPYRPATSLLTCGHPSPLAPSLLGQQHRNSSSVCGQTLPPQTTCSVQPQPPCLGLKAAPVQKQHRAPVLRRGFSHGHQHNSSGSGESYLTEHSGYLADGPGSDSSSGPCHGSSSDSMLNCTDISLQGIHGSCSTFRSSLSSDYDPFVYCSSEGPARDNGQEQLRPLREMRPRSLDLVVPGGAAPAKQQVLSHVHYHHHQHHHYRKDAECPPGQAGQGPGQRRSRYSGAKVGFHSSRTHRRTEKGHHCQQPLESSGVLKEAALAGQPTCPQQGQEPPHAPSTSPNRLNFSVDANRQAGTASTSLVPLPRRHSLQSRHHRRKRKCPLEPDPALLPEDSALPKACGAHIPHGHSAGYRCSPEVQPLIPSASLCGSGSRTLWKCLAPQSSSELKKQEEGLSGREGNYPVPDDFTGMGSPRHSLSLHLHCPSQQGRQGSEEEVQDVHEHSV
SIO_010081: RNF43
subclass of: SO_0000673
so part of: RNF43
location: join(2747342..2747578,2787680..2787802,2796571..2796645,2797281..2797412,2797929..2798030,2798672..2798827,2799389..2799491,2799911..2801440,2808389..2808432)
location: region:2747342-2808432:1
so has part: feature:2747342-2747578:1:exon
so has part: feature:2787680-2787802:1:exon
so has part: feature:2796571-2796645:1:exon
so has part: feature:2797281-2797412:1:exon
so has part: feature:2797929-2798030:1:exon
so has part: feature:2798672-2798827:1:exon
so has part: feature:2799389-2799491:1:exon
so has part: feature:2799911-2801440:1:exon
so has part: feature:2808389-2808432:1:exon

XP_030318586.1
type: Protein
SIO_000068: ncbiprotein

position:2808432:1
position: 2808432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2747342-2747578:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2787680-2787802:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2796571-2796645:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2797281-2797412:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2797929-2798030:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2798672-2798827:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2799389-2799491:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2799911-2801440:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2808389-2808432:1:exon

RNF43
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RNF43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF43 isoform X2
translation: MSAGPPLQLAVPWLWLLMATLQAGLGRTGLALAAAVESERAAAQKAIIRVIPLKVEPIILEGEFANVAEVTPAEGKLLQSHPLSLCNSSEDEHTESGFITIVKLEQPDRDPNPCLSLANKAKLAGERGARAILFDITDDESAADQLKKPRGLSQPVVLIRGHDAELLMGVVNKNREAHVKIEVKEPPAWPDYDVWILLTVVSTVVVIILIFVVRTKCQLNRTQDSLQQQTMQAIGQLATRKYQGRCRQASRWDSASSCSSAPVCAICLEEFSEGQELRIISCSHEFHRECVDPWLQQHHTCPLCMFNILVRDSVDQATAAGSRLAPQDMEPGRRLHLFRQHPGHALYHLPHAYPQRNLRSFPPEPAHGNLFFHSPELSQLDFGTIHYMPYRPATSLLTCGHPSPLAPSLLGQQHRNSSSVCGQTLPPQTTCSVQPQPPCLGLKAAPVQKQHRAPVLRRGFSHGHQHNSSGSGESYLTEHSGYLADGPGSDSSSGPCHGSSSDSMLNCTDISLQGIHGSCSTFRSSLSSDYDPFVYCSSEGPARDNGQEQLRPLREMRPRSLDLVVPGGAAPAKQQVLSHVHYHHHQHHHYRKDAECPPGQAGQGPGQRRSRYSGAKVGFHSSRTHRRTEKGHHCQQPLESSGVLKEAALAGQPTCPQQGQEPPHAPSTSPNRLNFSVDANRQAGTASTSLVPLPRRHSLQSRHHRRKRKCPLEPDPALLPEDSALPKACGAHIPHGHSAGYRCSPEVQPLIPSASLCGSGSRTLWKCLAPQSSSELKKQEEGLSGREGNYPVPDDFTGMGSPRHSLSLHLHCPSQQGSEEEVQDVHEHSV
SIO_010081: RNF43
subclass of: SO_0000673
so part of: RNF43
location: join(2747342..2747578,2787680..2787802,2796571..2796645,2797281..2797412,2797929..2798030,2798672..2798827,2799389..2799491,2799911..2801431,2808389..2808432)
location: region:2747342-2808432:1
so has part: feature:2747342-2747578:1:exon
so has part: feature:2787680-2787802:1:exon
so has part: feature:2796571-2796645:1:exon
so has part: feature:2797281-2797412:1:exon
so has part: feature:2797929-2798030:1:exon
so has part: feature:2798672-2798827:1:exon
so has part: feature:2799389-2799491:1:exon
so has part: feature:2799911-2801431:1:exon
so has part: feature:2808389-2808432:1:exon

XP_030318587.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2747342-2747578:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2787680-2787802:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2796571-2796645:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2797281-2797412:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2797929-2798030:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2798672-2798827:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2799389-2799491:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2799911-2801431:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2808389-2808432:1:exon

SUPT4H1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SUPT4H1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2811742..2814038
location: region:2811742-2814038:1
so has part: feature:2811742-2814038:1:exon
subclass of: SO_0000010

103535850
type: Gene
SIO_000068: ncbigene

position:2811742:1
position: 2811742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2814038:1
position: 2814038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2811742-2814038:1:exon

SUPT4H1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SUPT4H1
product: SPT4 homolog, DSIF elongation factor subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 1 long SRA read, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_030462759.1
SIO_010081: SUPT4H1
subclass of: SO_0000673
so part of: SUPT4H1
location: join(2811742..2811890,2812202..2812308,2812420..2812475,2812659..2812712,2813856..2814038)
location: region:2811742-2814038:1
so has part: feature:2811742-2811890:1:exon
so has part: feature:2812202-2812308:1:exon
so has part: feature:2812420-2812475:1:exon
so has part: feature:2812659-2812712:1:exon
so has part: feature:2813856-2814038:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2811742-2811890:1:exon

position:2811890:1
position: 2811890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2812202-2812308:1:exon

position:2812202:1
position: 2812202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2812308:1
position: 2812308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2812420-2812475:1:exon

position:2812420:1
position: 2812420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2812475:1
position: 2812475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2812659-2812712:1:exon

position:2812659:1
position: 2812659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2812712:1
position: 2812712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2813856-2814038:1:exon

position:2813856:1
position: 2813856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SUPT4H1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SUPT4H1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation factor SPT4
translation: MALETVPKDLRHLRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIIAMMSPEDSWVSKWQRISNFKPGVYAVSVTGRLPQGIVRELKSRGVAYKSRDTAIKT
SIO_010081: SUPT4H1
subclass of: SO_0000673
so part of: SUPT4H1
location: join(2811822..2811890,2812202..2812308,2812420..2812475,2812659..2812712,2813856..2813923)
location: region:2811822-2813923:1
so has part: feature:2811822-2811890:1:exon
so has part: feature:2812202-2812308:1:exon
so has part: feature:2812420-2812475:1:exon
so has part: feature:2812659-2812712:1:exon
so has part: feature:2813856-2813923:1:exon

XP_030318619.1
type: Protein
SIO_000068: ncbiprotein

position:2811822:1
position: 2811822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2813923:1
position: 2813923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2811822-2811890:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2812202-2812308:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2812420-2812475:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2812659-2812712:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2813856-2813923:1:exon

TSPOAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: TSPOAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2850178..2897697
location: region:2850178-2897697:1
so has part: feature:2850178-2897697:1:exon
subclass of: SO_0000010

103535820
type: Gene
SIO_000068: ncbigene

position:2850178:1
position: 2850178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2897697:1
position: 2897697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2850178-2897697:1:exon

TSPOAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TSPOAP1
product: TSPO associated protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 1 long SRA read, 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030462707.1
SIO_010081: TSPOAP1
subclass of: SO_0000673
so part of: TSPOAP1
location: join(2850178..2850384,2855483..2855590,2856441..2856524,2857873..2857962,2859251..2859373,2859734..2859838,2860206..2860256,2866310..2866493,2866827..2867044,2868082..2868191,2869701..2869810,2871368..2872183,2872700..2872851,2873867..2874460,2877372..2877674,2877930..2878109,2881329..2882453,2883056..2883182,2883286..2883437,2883607..2883775,2885803..2885874,2886242..2886274,2886535..2886638,2888485..2888556,2889205..2889333,2892764..2892823,2896377..2897697)
location: region:2850178-2897697:1
so has part: feature:2850178-2850384:1:exon
so has part: feature:2855483-2855590:1:exon
so has part: feature:2856441-2856524:1:exon
so has part: feature:2857873-2857962:1:exon
so has part: feature:2859251-2859373:1:exon
so has part: feature:2859734-2859838:1:exon
so has part: feature:2860206-2860256:1:exon
so has part: feature:2866310-2866493:1:exon
so has part: feature:2866827-2867044:1:exon
so has part: feature:2868082-2868191:1:exon
so has part: feature:2869701-2869810:1:exon
so has part: feature:2871368-2872183:1:exon
so has part: feature:2872700-2872851:1:exon
so has part: feature:2873867-2874460:1:exon
so has part: feature:2877372-2877674:1:exon
so has part: feature:2877930-2878109:1:exon
so has part: feature:2881329-2882453:1:exon
so has part: feature:2883056-2883182:1:exon
so has part: feature:2883286-2883437:1:exon
so has part: feature:2883607-2883775:1:exon
so has part: feature:2885803-2885874:1:exon
so has part: feature:2886242-2886274:1:exon
so has part: feature:2886535-2886638:1:exon
so has part: feature:2888485-2888556:1:exon
so has part: feature:2889205-2889333:1:exon
so has part: feature:2892764-2892823:1:exon
so has part: feature:2896377-2897697:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2850178-2850384:1:exon

position:2850384:1
position: 2850384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2855483-2855590:1:exon

position:2855483:1
position: 2855483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2855590:1
position: 2855590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2856441-2856524:1:exon

position:2856441:1
position: 2856441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2856524:1
position: 2856524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2857873-2857962:1:exon

position:2857873:1
position: 2857873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2857962:1
position: 2857962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2859251-2859373:1:exon

position:2859251:1
position: 2859251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2859373:1
position: 2859373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2859734-2859838:1:exon

position:2859734:1
position: 2859734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2859838:1
position: 2859838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2860206-2860256:1:exon

position:2860206:1
position: 2860206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2860256:1
position: 2860256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2866310-2866493:1:exon

position:2866310:1
position: 2866310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2866493:1
position: 2866493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2866827-2867044:1:exon

position:2866827:1
position: 2866827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2867044:1
position: 2867044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2868082-2868191:1:exon

position:2868082:1
position: 2868082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2868191:1
position: 2868191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2869701-2869810:1:exon

position:2869701:1
position: 2869701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2869810:1
position: 2869810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2871368-2872183:1:exon

position:2871368:1
position: 2871368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2872183:1
position: 2872183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2872700-2872851:1:exon

position:2872700:1
position: 2872700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2872851:1
position: 2872851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2873867-2874460:1:exon

position:2873867:1
position: 2873867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2874460:1
position: 2874460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2877372-2877674:1:exon

position:2877372:1
position: 2877372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2877674:1
position: 2877674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2877930-2878109:1:exon

position:2877930:1
position: 2877930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2878109:1
position: 2878109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2881329-2882453:1:exon

position:2881329:1
position: 2881329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2882453:1
position: 2882453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2883056-2883182:1:exon

position:2883056:1
position: 2883056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2883182:1
position: 2883182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2883286-2883437:1:exon

position:2883286:1
position: 2883286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2883437:1
position: 2883437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2883607-2883775:1:exon

position:2883607:1
position: 2883607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2883775:1
position: 2883775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2885803-2885874:1:exon

position:2885803:1
position: 2885803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2885874:1
position: 2885874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2886242-2886274:1:exon

position:2886242:1
position: 2886242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2886274:1
position: 2886274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2886535-2886638:1:exon