Calypte anna isolate BGI_N300 chromosome 14, bCalAnn1_v1.p, whole genome shotgun sequence.
type: Entry
definition: Calypte anna isolate BGI_N300 chromosome 14, bCalAnn1_v1.p, whole genome shotgun sequence.
sequence version: NC_044260.1
sequence date: 2019-08-24
sequence: sequence
division: CON
label: NC_044260.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA558503
dblink: SAMN02265252
keyword: WGS
keyword: RefSeq
source: Calypte anna (Anna's hummingbird)
organism: Calypte anna
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Apodiformes; Trochilidae; Calypte.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM012127.1.\nAssembly name: bCalAnn1_v1.p\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2019/05/16. The original whole-genome shotgun project has the\naccession RRCD00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 26-SEP-2018\nAssembly Method :: FALCON v. 5.1.1; FALCON unzip v. 1.0.2;\n scaff10X v. git 4.28.2018; Bionano Solve\n DLS v. 3.2.1; Salsa2 HiC v. 2.0;\n smrtanalysis Arrow polishing & gap\n filling v. 5.1.0.26412; longranger align\n v. 2.2.2; freebayes v. 1.2.0;\n purge_haplotigs v. bit 7.10.2018; gEVAL\n manual curation v. 2018-09-07\nAssembly Name :: bCalAnn1_v1.p\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 54.0x\nSequencing Technology :: PacBio RSII; 10X Genomics linked reads;\n Bionano Genomics DLS; Arima Genomics HiC\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Calypte anna Annotation Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 15497061
topology: linear
so has quality: SO_0000987
location: 1..15497061
location: region:1-15497061:1
RO_0002162: 9244

NC_044260
type: RefSeq
SIO_000068: refseq

PRJNA558503
type: BioProject
SIO_000068: bioproject

SAMN02265252
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15497061:1
position: 15497061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-15497061:1:source
so part of: sequence
organism: Calypte anna
mol type: genomic DNA
isolate: BGI_N300
chromosome: 14
sex: female
country: USA

9244
type: Taxonomy
SIO_000068: taxonomy

LOC115599135
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599135
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5464..8146)
location: region:5464-8146:-1
so has part: feature:5464-8146:-1:exon
subclass of: SO_0000011

115599135
type: Gene
SIO_000068: ncbigene

position:5464:-1
position: 5464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8146:-1
position: 8146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5464-8146:-1:exon

LOC115599135
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599135
product: uncharacterized LOC115599135
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988156.1
SIO_010081: LOC115599135
subclass of: SO_0000673
so part of: LOC115599135
location: complement(join(5464..5552,5671..5858,8108..8146))
location: region:5464-8146:-1
so has part: feature:8108-8146:-1:exon
so has part: feature:5671-5858:-1:exon
so has part: feature:5464-5552:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8108-8146:-1:exon

position:8108:-1
position: 8108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5671-5858:-1:exon

position:5671:-1
position: 5671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5858:-1
position: 5858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5464-5552:-1:exon

position:5552:-1
position: 5552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMURF1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SMURF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11035..56153)
location: region:11035-56153:-1
so has part: feature:11035-56153:-1:exon
subclass of: SO_0000010

103533109
type: Gene
SIO_000068: ncbigene

position:11035:-1
position: 11035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56153:-1
position: 56153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11035-56153:-1:exon

SMURF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SMURF1
product: SMAD specific E3 ubiquitin protein ligase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 ESTs, 3 long SRA reads, 29 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030459597.1
SIO_010081: SMURF1
subclass of: SO_0000673
so part of: SMURF1
location: complement(join(11035..14783,15474..15549,16302..16503,17995..18115,18481..18618,19305..19483,21026..21140,21393..21496,21761..21965,23182..23328,25434..25518,26321..26559,26934..27009,27846..27911,28029..28162,28547..28655,29198..29236,55888..56153))
location: region:11035-56153:-1
so has part: feature:55888-56153:-1:exon
so has part: feature:29198-29236:-1:exon
so has part: feature:28547-28655:-1:exon
so has part: feature:28029-28162:-1:exon
so has part: feature:27846-27911:-1:exon
so has part: feature:26934-27009:-1:exon
so has part: feature:26321-26559:-1:exon
so has part: feature:25434-25518:-1:exon
so has part: feature:23182-23328:-1:exon
so has part: feature:21761-21965:-1:exon
so has part: feature:21393-21496:-1:exon
so has part: feature:21026-21140:-1:exon
so has part: feature:19305-19483:-1:exon
so has part: feature:18481-18618:-1:exon
so has part: feature:17995-18115:-1:exon
so has part: feature:16302-16503:-1:exon
so has part: feature:15474-15549:-1:exon
so has part: feature:11035-14783:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55888-56153:-1:exon

position:55888:-1
position: 55888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:29198-29236:-1:exon

position:29198:-1
position: 29198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29236:-1
position: 29236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:28547-28655:-1:exon

position:28547:-1
position: 28547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28655:-1
position: 28655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:28029-28162:-1:exon

position:28029:-1
position: 28029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28162:-1
position: 28162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:27846-27911:-1:exon

position:27846:-1
position: 27846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27911:-1
position: 27911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:26934-27009:-1:exon

position:26934:-1
position: 26934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27009:-1
position: 27009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:26321-26559:-1:exon

position:26321:-1
position: 26321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26559:-1
position: 26559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:25434-25518:-1:exon

position:25434:-1
position: 25434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25518:-1
position: 25518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:23182-23328:-1:exon

position:23182:-1
position: 23182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23328:-1
position: 23328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:21761-21965:-1:exon

position:21761:-1
position: 21761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21965:-1
position: 21965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:21393-21496:-1:exon

position:21393:-1
position: 21393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21496:-1
position: 21496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:21026-21140:-1:exon

position:21026:-1
position: 21026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21140:-1
position: 21140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:19305-19483:-1:exon

position:19305:-1
position: 19305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19483:-1
position: 19483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:18481-18618:-1:exon

position:18481:-1
position: 18481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18618:-1
position: 18618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:17995-18115:-1:exon

position:17995:-1
position: 17995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18115:-1
position: 18115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:16302-16503:-1:exon

position:16302:-1
position: 16302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16503:-1
position: 16503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:15474-15549:-1:exon

position:15474:-1
position: 15474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15549:-1
position: 15549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:11035-14783:-1:exon

position:14783:-1
position: 14783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMURF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SMURF1
product: SMAD specific E3 ubiquitin protein ligase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 7 ESTs, 1 long SRA read, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030459596.1
SIO_010081: SMURF1
subclass of: SO_0000673
so part of: SMURF1
location: complement(join(11035..14783,15474..15558,16302..16503,17995..18115,18481..18618,19305..19483,21026..21140,21393..21496,21761..21965,23182..23328,25434..25518,26321..26559,26934..27009,27846..27911,28029..28162,28547..28655,29198..29236,55888..56113))
location: region:11035-56113:-1
so has part: feature:55888-56113:-1:exon
so has part: feature:29198-29236:-1:exon
so has part: feature:28547-28655:-1:exon
so has part: feature:28029-28162:-1:exon
so has part: feature:27846-27911:-1:exon
so has part: feature:26934-27009:-1:exon
so has part: feature:26321-26559:-1:exon
so has part: feature:25434-25518:-1:exon
so has part: feature:23182-23328:-1:exon
so has part: feature:21761-21965:-1:exon
so has part: feature:21393-21496:-1:exon
so has part: feature:21026-21140:-1:exon
so has part: feature:19305-19483:-1:exon
so has part: feature:18481-18618:-1:exon
so has part: feature:17995-18115:-1:exon
so has part: feature:16302-16503:-1:exon
so has part: feature:15474-15558:-1:exon
so has part: feature:11035-14783:-1:exon

position:56113:-1
position: 56113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55888-56113:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29198-29236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:28547-28655:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:28029-28162:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27846-27911:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:26934-27009:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:26321-26559:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:25434-25518:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:23182-23328:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:21761-21965:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:21393-21496:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:21026-21140:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:19305-19483:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:18481-18618:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:17995-18115:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:16302-16503:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:15474-15558:-1:exon

position:15558:-1
position: 15558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:11035-14783:-1:exon

SMURF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SMURF1
product: SMAD specific E3 ubiquitin protein ligase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 1 long SRA read, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030459595.1
SIO_010081: SMURF1
subclass of: SO_0000673
so part of: SMURF1
location: complement(join(11035..14783,15474..15549,16302..16503,17995..18115,18481..18618,19305..19483,21026..21140,21393..21496,21761..21965,23182..23328,25434..25518,26321..26574,26934..27009,27846..27911,28029..28162,28547..28655,29198..29236,55888..56113))
location: region:11035-56113:-1
so has part: feature:55888-56113:-1:exon
so has part: feature:29198-29236:-1:exon
so has part: feature:28547-28655:-1:exon
so has part: feature:28029-28162:-1:exon
so has part: feature:27846-27911:-1:exon
so has part: feature:26934-27009:-1:exon
so has part: feature:26321-26574:-1:exon
so has part: feature:25434-25518:-1:exon
so has part: feature:23182-23328:-1:exon
so has part: feature:21761-21965:-1:exon
so has part: feature:21393-21496:-1:exon
so has part: feature:21026-21140:-1:exon
so has part: feature:19305-19483:-1:exon
so has part: feature:18481-18618:-1:exon
so has part: feature:17995-18115:-1:exon
so has part: feature:16302-16503:-1:exon
so has part: feature:15474-15549:-1:exon
so has part: feature:11035-14783:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55888-56113:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29198-29236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:28547-28655:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:28029-28162:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27846-27911:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:26934-27009:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:26321-26574:-1:exon

position:26574:-1
position: 26574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:25434-25518:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:23182-23328:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:21761-21965:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:21393-21496:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:21026-21140:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:19305-19483:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:18481-18618:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:17995-18115:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:16302-16503:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:15474-15549:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:11035-14783:-1:exon

SMURF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SMURF1
product: SMAD specific E3 ubiquitin protein ligase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 1 long SRA read, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030459594.1
SIO_010081: SMURF1
subclass of: SO_0000673
so part of: SMURF1
location: complement(join(11035..14783,15474..15558,16302..16503,17995..18115,18481..18618,19305..19483,21026..21140,21393..21496,21761..21965,23182..23328,25434..25518,26321..26574,26934..27009,27846..27911,28029..28162,28547..28655,29198..29236,55888..56113))
location: region:11035-56113:-1
so has part: feature:55888-56113:-1:exon
so has part: feature:29198-29236:-1:exon
so has part: feature:28547-28655:-1:exon
so has part: feature:28029-28162:-1:exon
so has part: feature:27846-27911:-1:exon
so has part: feature:26934-27009:-1:exon
so has part: feature:26321-26574:-1:exon
so has part: feature:25434-25518:-1:exon
so has part: feature:23182-23328:-1:exon
so has part: feature:21761-21965:-1:exon
so has part: feature:21393-21496:-1:exon
so has part: feature:21026-21140:-1:exon
so has part: feature:19305-19483:-1:exon
so has part: feature:18481-18618:-1:exon
so has part: feature:17995-18115:-1:exon
so has part: feature:16302-16503:-1:exon
so has part: feature:15474-15558:-1:exon
so has part: feature:11035-14783:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55888-56113:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29198-29236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:28547-28655:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:28029-28162:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27846-27911:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:26934-27009:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:26321-26574:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:25434-25518:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:23182-23328:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:21761-21965:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:21393-21496:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:21026-21140:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:19305-19483:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:18481-18618:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:17995-18115:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:16302-16503:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:15474-15558:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:11035-14783:-1:exon

SMURF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SMURF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase SMURF1 isoform X4
translation: MSNPATRRNGSSIKIRLTVLCAKNLAKKDFFRFPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPTDTDAVRGQIVVSLQTRDRIGTGGSVVDCRGLLENEGTVYEDSGPGRPLSCFMEEPAPYTDTTGAAGGGGCRFVESPSQDQRLQAQRLRAPEVRGHVQTPQNRPHGHQSPDLPEGYEQRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVNCDELGPLPPGWEVRSTVSGRIYFVDHNNRTTQFTDPRLHHIMNHQCQLKEPSQQPLPAPNEGSLEDGEELPAQRYERDLVQKLKVLRHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREWLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRILQHELKPNGRNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQKELELIIGGLDKIDLNDWKSNTRLKHCMADSNIVKWFWQAVETFDEERRARLLQFVTGSTRVPLQGFKALQGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVEETCGFAVE
SIO_010081: SMURF1
subclass of: SO_0000673
so part of: SMURF1
location: complement(join(14684..14783,15474..15549,16302..16503,17995..18115,18481..18618,19305..19483,21026..21140,21393..21496,21761..21965,23182..23328,25434..25518,26321..26559,26934..27009,27846..27911,28029..28162,28547..28655,29198..29236,55888..55942))
location: region:14684-55942:-1
so has part: feature:55888-55942:-1:exon
so has part: feature:29198-29236:-1:exon
so has part: feature:28547-28655:-1:exon
so has part: feature:28029-28162:-1:exon
so has part: feature:27846-27911:-1:exon
so has part: feature:26934-27009:-1:exon
so has part: feature:26321-26559:-1:exon
so has part: feature:25434-25518:-1:exon
so has part: feature:23182-23328:-1:exon
so has part: feature:21761-21965:-1:exon
so has part: feature:21393-21496:-1:exon
so has part: feature:21026-21140:-1:exon
so has part: feature:19305-19483:-1:exon
so has part: feature:18481-18618:-1:exon
so has part: feature:17995-18115:-1:exon
so has part: feature:16302-16503:-1:exon
so has part: feature:15474-15549:-1:exon
so has part: feature:14684-14783:-1:exon

XP_030315457.1
type: Protein
SIO_000068: ncbiprotein

position:14684:-1
position: 14684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55942:-1
position: 55942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55888-55942:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29198-29236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:28547-28655:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:28029-28162:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27846-27911:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:26934-27009:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:26321-26559:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:25434-25518:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:23182-23328:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:21761-21965:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:21393-21496:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:21026-21140:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:19305-19483:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:18481-18618:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:17995-18115:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:16302-16503:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:15474-15549:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:14684-14783:-1:exon

SMURF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SMURF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase SMURF1 isoform X3
translation: MSNPATRRNGSSIKIRLTVLCAKNLAKKDFFRFPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPTDTDAVRGQIVVSLQTRDRIGTGGSVVDCRGLLENEGTVYEDSGPGRPLSCFMEEPAPYTDTTGAAGGGGCRFVESPSQDQRLQAQRLRAPEVRGHVQTPQNRPHGHQSPDLPEGYEQRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVNCDELGPLPPGWEVRSTVSGRIYFVDHNNRTTQFTDPRLHHIMNHQCQLKEPSQQPLPAPNEGSLEDGEELPAQRYERDLVQKLKVLRHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREWLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRILQHELKPNGRNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQKELELIIGGLDKIDLNDWKSNTRLKHCMADSNIVKWFWQAVETFDEERRARLLQFVTGSTRVPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVEETCGFAVE
SIO_010081: SMURF1
subclass of: SO_0000673
so part of: SMURF1
location: complement(join(14684..14783,15474..15558,16302..16503,17995..18115,18481..18618,19305..19483,21026..21140,21393..21496,21761..21965,23182..23328,25434..25518,26321..26559,26934..27009,27846..27911,28029..28162,28547..28655,29198..29236,55888..55942))
location: region:14684-55942:-1
so has part: feature:55888-55942:-1:exon
so has part: feature:29198-29236:-1:exon
so has part: feature:28547-28655:-1:exon
so has part: feature:28029-28162:-1:exon
so has part: feature:27846-27911:-1:exon
so has part: feature:26934-27009:-1:exon
so has part: feature:26321-26559:-1:exon
so has part: feature:25434-25518:-1:exon
so has part: feature:23182-23328:-1:exon
so has part: feature:21761-21965:-1:exon
so has part: feature:21393-21496:-1:exon
so has part: feature:21026-21140:-1:exon
so has part: feature:19305-19483:-1:exon
so has part: feature:18481-18618:-1:exon
so has part: feature:17995-18115:-1:exon
so has part: feature:16302-16503:-1:exon
so has part: feature:15474-15558:-1:exon
so has part: feature:14684-14783:-1:exon

XP_030315456.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55888-55942:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29198-29236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:28547-28655:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:28029-28162:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27846-27911:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:26934-27009:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:26321-26559:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:25434-25518:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:23182-23328:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:21761-21965:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:21393-21496:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:21026-21140:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:19305-19483:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:18481-18618:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:17995-18115:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:16302-16503:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:15474-15558:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:14684-14783:-1:exon

SMURF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SMURF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase SMURF1 isoform X2
translation: MSNPATRRNGSSIKIRLTVLCAKNLAKKDFFRFPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPTDTDAVRGQIVVSLQTRDRIGTGGSVVDCRGLLENEGFPIFRTVYEDSGPGRPLSCFMEEPAPYTDTTGAAGGGGCRFVESPSQDQRLQAQRLRAPEVRGHVQTPQNRPHGHQSPDLPEGYEQRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVNCDELGPLPPGWEVRSTVSGRIYFVDHNNRTTQFTDPRLHHIMNHQCQLKEPSQQPLPAPNEGSLEDGEELPAQRYERDLVQKLKVLRHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREWLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRILQHELKPNGRNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQKELELIIGGLDKIDLNDWKSNTRLKHCMADSNIVKWFWQAVETFDEERRARLLQFVTGSTRVPLQGFKALQGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVEETCGFAVE
SIO_010081: SMURF1
subclass of: SO_0000673
so part of: SMURF1
location: complement(join(14684..14783,15474..15549,16302..16503,17995..18115,18481..18618,19305..19483,21026..21140,21393..21496,21761..21965,23182..23328,25434..25518,26321..26574,26934..27009,27846..27911,28029..28162,28547..28655,29198..29236,55888..55942))
location: region:14684-55942:-1
so has part: feature:55888-55942:-1:exon
so has part: feature:29198-29236:-1:exon
so has part: feature:28547-28655:-1:exon
so has part: feature:28029-28162:-1:exon
so has part: feature:27846-27911:-1:exon
so has part: feature:26934-27009:-1:exon
so has part: feature:26321-26574:-1:exon
so has part: feature:25434-25518:-1:exon
so has part: feature:23182-23328:-1:exon
so has part: feature:21761-21965:-1:exon
so has part: feature:21393-21496:-1:exon
so has part: feature:21026-21140:-1:exon
so has part: feature:19305-19483:-1:exon
so has part: feature:18481-18618:-1:exon
so has part: feature:17995-18115:-1:exon
so has part: feature:16302-16503:-1:exon
so has part: feature:15474-15549:-1:exon
so has part: feature:14684-14783:-1:exon

XP_030315455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55888-55942:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29198-29236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:28547-28655:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:28029-28162:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27846-27911:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:26934-27009:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:26321-26574:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:25434-25518:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:23182-23328:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:21761-21965:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:21393-21496:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:21026-21140:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:19305-19483:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:18481-18618:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:17995-18115:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:16302-16503:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:15474-15549:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:14684-14783:-1:exon

SMURF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SMURF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase SMURF1 isoform X1
translation: MSNPATRRNGSSIKIRLTVLCAKNLAKKDFFRFPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPTDTDAVRGQIVVSLQTRDRIGTGGSVVDCRGLLENEGFPIFRTVYEDSGPGRPLSCFMEEPAPYTDTTGAAGGGGCRFVESPSQDQRLQAQRLRAPEVRGHVQTPQNRPHGHQSPDLPEGYEQRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVNCDELGPLPPGWEVRSTVSGRIYFVDHNNRTTQFTDPRLHHIMNHQCQLKEPSQQPLPAPNEGSLEDGEELPAQRYERDLVQKLKVLRHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREWLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRILQHELKPNGRNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQKELELIIGGLDKIDLNDWKSNTRLKHCMADSNIVKWFWQAVETFDEERRARLLQFVTGSTRVPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVEETCGFAVE
SIO_010081: SMURF1
subclass of: SO_0000673
so part of: SMURF1
location: complement(join(14684..14783,15474..15558,16302..16503,17995..18115,18481..18618,19305..19483,21026..21140,21393..21496,21761..21965,23182..23328,25434..25518,26321..26574,26934..27009,27846..27911,28029..28162,28547..28655,29198..29236,55888..55942))
location: region:14684-55942:-1
so has part: feature:55888-55942:-1:exon
so has part: feature:29198-29236:-1:exon
so has part: feature:28547-28655:-1:exon
so has part: feature:28029-28162:-1:exon
so has part: feature:27846-27911:-1:exon
so has part: feature:26934-27009:-1:exon
so has part: feature:26321-26574:-1:exon
so has part: feature:25434-25518:-1:exon
so has part: feature:23182-23328:-1:exon
so has part: feature:21761-21965:-1:exon
so has part: feature:21393-21496:-1:exon
so has part: feature:21026-21140:-1:exon
so has part: feature:19305-19483:-1:exon
so has part: feature:18481-18618:-1:exon
so has part: feature:17995-18115:-1:exon
so has part: feature:16302-16503:-1:exon
so has part: feature:15474-15558:-1:exon
so has part: feature:14684-14783:-1:exon

XP_030315454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55888-55942:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29198-29236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:28547-28655:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:28029-28162:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27846-27911:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:26934-27009:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:26321-26574:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:25434-25518:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:23182-23328:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:21761-21965:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:21393-21496:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:21026-21140:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:19305-19483:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:18481-18618:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:17995-18115:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:16302-16503:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:15474-15558:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:14684-14783:-1:exon

KPNA7
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: KPNA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(59523..66764)
location: region:59523-66764:-1
so has part: feature:59523-66764:-1:exon
subclass of: SO_0000010

103533076
type: Gene
SIO_000068: ncbigene

position:59523:-1
position: 59523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66764:-1
position: 66764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59523-66764:-1:exon

KPNA7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: KPNA7
product: karyopherin subunit alpha 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 24 Proteins
transcript id: XM_008498901.1
SIO_010081: KPNA7
subclass of: SO_0000673
so part of: KPNA7
location: complement(join(59523..59603,60633..60782,61496..61678,62262..62495,62855..63118,63758..63840,64292..64560,65313..65398,65902..66036,66699..66764))
location: region:59523-66764:-1
so has part: feature:66699-66764:-1:exon
so has part: feature:65902-66036:-1:exon
so has part: feature:65313-65398:-1:exon
so has part: feature:64292-64560:-1:exon
so has part: feature:63758-63840:-1:exon
so has part: feature:62855-63118:-1:exon
so has part: feature:62262-62495:-1:exon
so has part: feature:61496-61678:-1:exon
so has part: feature:60633-60782:-1:exon
so has part: feature:59523-59603:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:66699-66764:-1:exon

position:66699:-1
position: 66699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:65902-66036:-1:exon

position:65902:-1
position: 65902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66036:-1
position: 66036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:65313-65398:-1:exon

position:65313:-1
position: 65313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65398:-1
position: 65398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:64292-64560:-1:exon

position:64292:-1
position: 64292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64560:-1
position: 64560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:63758-63840:-1:exon

position:63758:-1
position: 63758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63840:-1
position: 63840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:62855-63118:-1:exon

position:62855:-1
position: 62855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63118:-1
position: 63118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:62262-62495:-1:exon

position:62262:-1
position: 62262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62495:-1
position: 62495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:61496-61678:-1:exon

position:61496:-1
position: 61496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61678:-1
position: 61678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:60633-60782:-1:exon

position:60633:-1
position: 60633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60782:-1
position: 60782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:59523-59603:-1:exon

position:59603:-1
position: 59603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KPNA7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: KPNA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: importin subunit alpha-8
translation: MPVGSELSERMKKFKNKGKDAAALRRQRAEVNIELRKAKKDEQILKRRSISFSLLDGSLSPEDKGNEIVQLSLEEIIGAVNGSNTELQLQATQAARRMLSRQKDPPINQVIELGIIPRLVEFLSRGDSAPLQFEAAWALTNIASGTSDHTKAVVEGGAIPAFISLLSSPHMHISEQAVWALGNIAGDGPLYRDALINCNVIPPLLALVSPVTPVGFLRNITWTLSNLCRNKNPHPPLDAVKKMLPVLICLLEHEDKEIISDSCWAISYLTDGSNDRIQIVVDTGILPRLVELMACPDLIVLTPALRAIGNVVTGTDEQTQAAIDTGVLAVLPRLLRHAKPTIQKEAAWTLSNIAAGPSRQIQQLITCGLLPPLVEVLSKGDFKAQKEAVWAVANFTTGGTVEQVVELVQSGVLKPFLNLLLAKDSKTILVILDTLSNLFLAAEKLGQTERLCLLVEELDGLEKIEALQTHDNNMVYRAALNLIEKYFSGEENEELQPGTGEDGLYNFSVKKQNFDF
SIO_010081: KPNA7
subclass of: SO_0000673
so part of: KPNA7
location: complement(join(59523..59603,60633..60782,61496..61678,62262..62495,62855..63118,63758..63840,64292..64560,65313..65398,65902..66036,66699..66764))
location: region:59523-66764:-1
so has part: feature:66699-66764:-1:exon
so has part: feature:65902-66036:-1:exon
so has part: feature:65313-65398:-1:exon
so has part: feature:64292-64560:-1:exon
so has part: feature:63758-63840:-1:exon
so has part: feature:62855-63118:-1:exon
so has part: feature:62262-62495:-1:exon
so has part: feature:61496-61678:-1:exon
so has part: feature:60633-60782:-1:exon
so has part: feature:59523-59603:-1:exon

XP_008497123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66699-66764:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:65902-66036:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:65313-65398:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:64292-64560:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:63758-63840:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:62855-63118:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:62262-62495:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:61496-61678:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:60633-60782:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:59523-59603:-1:exon

LOC103533075
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103533075
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 107577..123127
location: region:107577-123127:1
so has part: feature:107577-123127:1:exon
subclass of: SO_0000010

103533075
type: Gene
SIO_000068: ncbigene

position:107577:1
position: 107577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123127:1
position: 123127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107577-123127:1:exon

LOC103533075
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103533075
product: actin-related protein 2/3 complex subunit 1A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 ESTs, 1 long SRA read, 25 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030459564.1
SIO_010081: LOC103533075
subclass of: SO_0000673
so part of: LOC103533075
location: join(107577..107800,110982..111063,111781..111885,114078..114300,115689..115796,119143..119355,120507..120582,120750..120943,121658..121748,122651..123127)
location: region:107577-123127:1
so has part: feature:107577-107800:1:exon
so has part: feature:110982-111063:1:exon
so has part: feature:111781-111885:1:exon
so has part: feature:114078-114300:1:exon
so has part: feature:115689-115796:1:exon
so has part: feature:119143-119355:1:exon
so has part: feature:120507-120582:1:exon
so has part: feature:120750-120943:1:exon
so has part: feature:121658-121748:1:exon
so has part: feature:122651-123127:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:107577-107800:1:exon

position:107800:1
position: 107800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:110982-111063:1:exon

position:110982:1
position: 110982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111063:1
position: 111063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:111781-111885:1:exon

position:111781:1
position: 111781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111885:1
position: 111885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:114078-114300:1:exon

position:114078:1
position: 114078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114300:1
position: 114300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:115689-115796:1:exon

position:115689:1
position: 115689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115796:1
position: 115796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:119143-119355:1:exon

position:119143:1
position: 119143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119355:1
position: 119355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:120507-120582:1:exon

position:120507:1
position: 120507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120582:1
position: 120582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:120750-120943:1:exon

position:120750:1
position: 120750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120943:1
position: 120943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:121658-121748:1:exon

position:121658:1
position: 121658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121748:1
position: 121748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:122651-123127:1:exon

position:122651:1
position: 122651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC103533075
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103533075
product: actin-related protein 2/3 complex subunit 1A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030459565.1
SIO_010081: LOC103533075
subclass of: SO_0000673
so part of: LOC103533075
location: join(107609..107800,110982..111063,111781..111885,114078..114300,115689..115796,120507..120582,120750..120943,121658..121748,122651..123127)
location: region:107609-123127:1
so has part: feature:107609-107800:1:exon
so has part: feature:110982-111063:1:exon
so has part: feature:111781-111885:1:exon
so has part: feature:114078-114300:1:exon
so has part: feature:115689-115796:1:exon
so has part: feature:120507-120582:1:exon
so has part: feature:120750-120943:1:exon
so has part: feature:121658-121748:1:exon
so has part: feature:122651-123127:1:exon

position:107609:1
position: 107609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107609-107800:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:110982-111063:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:111781-111885:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114078-114300:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:115689-115796:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:120507-120582:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:120750-120943:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:121658-121748:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:122651-123127:1:exon

LOC103533075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103533075
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-related protein 2/3 complex subunit 1A isoform X1
translation: MSLHQFLLEPITCHAWNRDRTQIAISPNNHEVHIYKKSGNQWVKAHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKPASTPWGSKMPFGQLMSEFGGAGSGGWVHSVSFSASGNRLAWVSHDSTVSVADASKNMMVSQLKTEFLPLLSVSFVSENSVVAAGHDCCPMLFNCDDRGLLTFVSKLDIPKQNIQRNISAMERFRNMDKRATTEDRNTTLETLHQNSITQVSIYEIDKRDCRKFCTTGIDGAMTIWDFKTLESSIQGLRIM
SIO_010081: LOC103533075
subclass of: SO_0000673
so part of: LOC103533075
location: join(111000..111063,111781..111885,114078..114300,115689..115796,119143..119355,120507..120582,120750..120943,121658..121748,122651..122689)
location: region:111000-122689:1
so has part: feature:111000-111063:1:exon
so has part: feature:111781-111885:1:exon
so has part: feature:114078-114300:1:exon
so has part: feature:115689-115796:1:exon
so has part: feature:119143-119355:1:exon
so has part: feature:120507-120582:1:exon
so has part: feature:120750-120943:1:exon
so has part: feature:121658-121748:1:exon
so has part: feature:122651-122689:1:exon

XP_030315424.1
type: Protein
SIO_000068: ncbiprotein

position:111000:1
position: 111000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122689:1
position: 122689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111000-111063:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111781-111885:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:114078-114300:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:115689-115796:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:119143-119355:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:120507-120582:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:120750-120943:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:121658-121748:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:122651-122689:1:exon

LOC103533075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103533075
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-related protein 2/3 complex subunit 1A isoform X2
translation: MSLHQFLLEPITCHAWNRDRTQIAISPNNHEVHIYKKSGNQWVKAHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVSQLKTEFLPLLSVSFVSENSVVAAGHDCCPMLFNCDDRGLLTFVSKLDIPKQNIQRNISAMERFRNMDKRATTEDRNTTLETLHQNSITQVSIYEIDKRDCRKFCTTGIDGAMTIWDFKTLESSIQGLRIM
SIO_010081: LOC103533075
subclass of: SO_0000673
so part of: LOC103533075
location: join(111000..111063,111781..111885,114078..114300,115689..115796,120507..120582,120750..120943,121658..121748,122651..122689)
location: region:111000-122689:1
so has part: feature:111000-111063:1:exon
so has part: feature:111781-111885:1:exon
so has part: feature:114078-114300:1:exon
so has part: feature:115689-115796:1:exon
so has part: feature:120507-120582:1:exon
so has part: feature:120750-120943:1:exon
so has part: feature:121658-121748:1:exon
so has part: feature:122651-122689:1:exon

XP_030315425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111000-111063:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111781-111885:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:114078-114300:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:115689-115796:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:120507-120582:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:120750-120943:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:121658-121748:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:122651-122689:1:exon

LOC103533108
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103533108
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 125517..133086
location: region:125517-133086:1
so has part: feature:125517-133086:1:exon
subclass of: SO_0000010

103533108
type: Gene
SIO_000068: ncbigene

position:125517:1
position: 125517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133086:1
position: 133086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125517-133086:1:exon

LOC103533108
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103533108
product: actin-related protein 2/3 complex subunit 1B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 1 long SRA read, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030459566.1
SIO_010081: LOC103533108
subclass of: SO_0000673
so part of: LOC103533108
location: join(125517..125639,128428..128501,129131..129235,129692..129914,130312..130419,130744..130950,131194..131269,131349..131545,132255..132345,132829..133086)
location: region:125517-133086:1
so has part: feature:125517-125639:1:exon
so has part: feature:128428-128501:1:exon
so has part: feature:129131-129235:1:exon
so has part: feature:129692-129914:1:exon
so has part: feature:130312-130419:1:exon
so has part: feature:130744-130950:1:exon
so has part: feature:131194-131269:1:exon
so has part: feature:131349-131545:1:exon
so has part: feature:132255-132345:1:exon
so has part: feature:132829-133086:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:125517-125639:1:exon

position:125639:1
position: 125639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:128428-128501:1:exon

position:128428:1
position: 128428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128501:1
position: 128501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:129131-129235:1:exon

position:129131:1
position: 129131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129235:1
position: 129235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:129692-129914:1:exon

position:129692:1
position: 129692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129914:1
position: 129914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:130312-130419:1:exon

position:130312:1
position: 130312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130419:1
position: 130419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:130744-130950:1:exon

position:130744:1
position: 130744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130950:1
position: 130950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:131194-131269:1:exon

position:131194:1
position: 131194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131269:1
position: 131269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:131349-131545:1:exon

position:131349:1
position: 131349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131545:1
position: 131545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:132255-132345:1:exon

position:132255:1
position: 132255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132345:1
position: 132345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:132829-133086:1:exon

position:132829:1
position: 132829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC103533108
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103533108
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-related protein 2/3 complex subunit 1B
translation: MAYHSFLLEPISCHAWNKDRTQIALCPNNHEVHIYRKDGAKWTKVHELKEHNGQVTGIDWAPESNRLVTCGTDRNAYVWTLKGNVWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEERPSPTPWGSKMPFGELMFESSSSCGWVHSICFSASGTRVAWVSHDSTLCLADANKKMAVTSLCTETLPLLAVTFITEHSLVAAGHDCCPMLFTYEENQGALSFGGKLDVPKQSSQRGLTARERFQNLDKKASSDTARAGLDTLHKNSISQISVLVGGKAKCSQFCTTGMDGGMSIWDVKSLESALKDLKIK
SIO_010081: LOC103533108
subclass of: SO_0000673
so part of: LOC103533108
location: join(128438..128501,129131..129235,129692..129914,130312..130419,130744..130950,131194..131269,131349..131545,132255..132345,132829..132867)
location: region:128438-132867:1
so has part: feature:128438-128501:1:exon
so has part: feature:129131-129235:1:exon
so has part: feature:129692-129914:1:exon
so has part: feature:130312-130419:1:exon
so has part: feature:130744-130950:1:exon
so has part: feature:131194-131269:1:exon
so has part: feature:131349-131545:1:exon
so has part: feature:132255-132345:1:exon
so has part: feature:132829-132867:1:exon

XP_030315426.1
type: Protein
SIO_000068: ncbiprotein

position:128438:1
position: 128438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132867:1
position: 132867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128438-128501:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:129131-129235:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:129692-129914:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:130312-130419:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:130744-130950:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131194-131269:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:131349-131545:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:132255-132345:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:132829-132867:1:exon

PDAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PDAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(134627..142499)
location: region:134627-142499:-1
so has part: feature:134627-142499:-1:exon
subclass of: SO_0000010

103533107
type: Gene
SIO_000068: ncbigene

position:134627:-1
position: 134627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142499:-1
position: 142499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134627-142499:-1:exon

PDAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PDAP1
product: PDGFA associated protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030460072.1
SIO_010081: PDAP1
subclass of: SO_0000673
so part of: PDAP1
location: complement(join(134627..135506,136391..136542,137271..137392,138094..138201,139948..140039,142423..142499))
location: region:134627-142499:-1
so has part: feature:142423-142499:-1:exon
so has part: feature:139948-140039:-1:exon
so has part: feature:138094-138201:-1:exon
so has part: feature:137271-137392:-1:exon
so has part: feature:136391-136542:-1:exon
so has part: feature:134627-135506:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:142423-142499:-1:exon

position:142423:-1
position: 142423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:139948-140039:-1:exon

position:139948:-1
position: 139948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140039:-1
position: 140039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:138094-138201:-1:exon

position:138094:-1
position: 138094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138201:-1
position: 138201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:137271-137392:-1:exon

position:137271:-1
position: 137271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137392:-1
position: 137392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:136391-136542:-1:exon

position:136391:-1
position: 136391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136542:-1
position: 136542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:134627-135506:-1:exon

position:135506:-1
position: 135506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PDAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PDAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28 kDa heat- and acid-stable phosphoprotein
translation: MPKGGRKGGHKGRARQYTSPEEIDAQLQAEKQKAREEEEQEEGGEGATGDPKKEKKSLDSDESDEDDEDYQQKRKGVEGLIDIENPNRVIQTTKKVSQLDLDGPKELSRREREEIEKQKAKERYMKMHLAGKTEQAKADLARLAIIRKQREEAARKKEEERKAKDEAAMAGKRLQSLSLNK
SIO_010081: PDAP1
subclass of: SO_0000673
so part of: PDAP1
location: complement(join(135448..135506,136391..136542,137271..137392,138094..138201,139948..140039,142423..142435))
location: region:135448-142435:-1
so has part: feature:142423-142435:-1:exon
so has part: feature:139948-140039:-1:exon
so has part: feature:138094-138201:-1:exon
so has part: feature:137271-137392:-1:exon
so has part: feature:136391-136542:-1:exon
so has part: feature:135448-135506:-1:exon

XP_030315932.1
type: Protein
SIO_000068: ncbiprotein

position:135448:-1
position: 135448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142435:-1
position: 142435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142423-142435:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:139948-140039:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:138094-138201:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:137271-137392:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:136391-136542:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:135448-135506:-1:exon

BUD31
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: BUD31
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 142721..145113
location: region:142721-145113:1
so has part: feature:142721-145113:1:exon
subclass of: SO_0000010

103533106
type: Gene
SIO_000068: ncbigene

position:142721:1
position: 142721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145113:1
position: 145113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142721-145113:1:exon

BUD31
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: BUD31
product: BUD31 homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 2 ESTs, 1 long SRA read, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_030460079.1
SIO_010081: BUD31
subclass of: SO_0000673
so part of: BUD31
location: join(142721..142805,143238..143399,144033..144155,144364..144530,144837..145113)
location: region:142721-145113:1
so has part: feature:142721-142805:1:exon
so has part: feature:143238-143399:1:exon
so has part: feature:144033-144155:1:exon
so has part: feature:144364-144530:1:exon
so has part: feature:144837-145113:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:142721-142805:1:exon

position:142805:1
position: 142805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:143238-143399:1:exon

position:143238:1
position: 143238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143399:1
position: 143399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:144033-144155:1:exon

position:144033:1
position: 144033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144155:1
position: 144155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:144364-144530:1:exon

position:144364:1
position: 144364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144530:1
position: 144530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:144837-145113:1:exon

position:144837:1
position: 144837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BUD31
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: BUD31
product: BUD31 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030460077.1
SIO_010081: BUD31
subclass of: SO_0000673
so part of: BUD31
location: join(142724..142805,143304..143399,144033..144155,144364..144530,144837..145113)
location: region:142724-145113:1
so has part: feature:142724-142805:1:exon
so has part: feature:143304-143399:1:exon
so has part: feature:144033-144155:1:exon
so has part: feature:144364-144530:1:exon
so has part: feature:144837-145113:1:exon

position:142724:1
position: 142724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142724-142805:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143304-143399:1:exon

position:143304:1
position: 143304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:144033-144155:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144364-144530:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:144837-145113:1:exon

BUD31
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: BUD31
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein BUD31 homolog isoform X1
translation: MVSPEGRGHGERGPAAARKRRLRPGAMPKVKRSRKPPPDGWELIEPTLDELDQKMREAETEPHEGKRKVESLWPIFRIHHQKTRYIFDLFYKRKAISRELYEYCIKEGYADKNLIAKWKKQGYENLCCLRCIQTRDTNFGTNCICRVPKSKLEVGRIIECTHCGCRGCSG
SIO_010081: BUD31
subclass of: SO_0000673
so part of: BUD31
location: join(142730..142805,143304..143399,144033..144155,144364..144530,144837..144887)
location: region:142730-144887:1
so has part: feature:142730-142805:1:exon
so has part: feature:143304-143399:1:exon
so has part: feature:144033-144155:1:exon
so has part: feature:144364-144530:1:exon
so has part: feature:144837-144887:1:exon

XP_030315937.1
type: Protein
SIO_000068: ncbiprotein

position:142730:1
position: 142730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144887:1
position: 144887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142730-142805:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143304-143399:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:144033-144155:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144364-144530:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:144837-144887:1:exon

BUD31
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: BUD31
product: BUD31 homolog, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 2 ESTs, 1 long SRA read, 7 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030460080.1
SIO_010081: BUD31
subclass of: SO_0000673
so part of: BUD31
location: join(142782..143017,143238..143399,144033..144155,144364..144530,144837..145113)
location: region:142782-145113:1
so has part: feature:142782-143017:1:exon
so has part: feature:143238-143399:1:exon
so has part: feature:144033-144155:1:exon
so has part: feature:144364-144530:1:exon
so has part: feature:144837-145113:1:exon

position:142782:1
position: 142782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142782-143017:1:exon

position:143017:1
position: 143017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:143238-143399:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:144033-144155:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144364-144530:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:144837-145113:1:exon

BUD31
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: BUD31
product: BUD31 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 2 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030460078.1
SIO_010081: BUD31
subclass of: SO_0000673
so part of: BUD31
location: join(142804..142894,143238..143399,144033..144155,144364..144530,144837..145113)
location: region:142804-145113:1
so has part: feature:142804-142894:1:exon
so has part: feature:143238-143399:1:exon
so has part: feature:144033-144155:1:exon
so has part: feature:144364-144530:1:exon
so has part: feature:144837-145113:1:exon

position:142804:1
position: 142804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142804-142894:1:exon

position:142894:1
position: 142894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:143238-143399:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:144033-144155:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144364-144530:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:144837-145113:1:exon

BUD31
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: BUD31
product: BUD31 homolog, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030460081.1
SIO_010081: BUD31
subclass of: SO_0000673
so part of: BUD31
location: join(142813..142894,143304..143399,144033..144155,144364..144530,144837..145113)
location: region:142813-145113:1
so has part: feature:142813-142894:1:exon
so has part: feature:143304-143399:1:exon
so has part: feature:144033-144155:1:exon
so has part: feature:144364-144530:1:exon
so has part: feature:144837-145113:1:exon

position:142813:1
position: 142813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142813-142894:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143304-143399:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:144033-144155:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144364-144530:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:144837-145113:1:exon

BUD31
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: BUD31
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein BUD31 homolog isoform X2
translation: MPKVKRSRKPPPDGWELIEPTLDELDQKMREAETEPHEGKRKVESLWPIFRIHHQKTRYIFDLFYKRKAISRELYEYCIKEGYADKNLIAKWKKQGYENLCCLRCIQTRDTNFGTNCICRVPKSKLEVGRIIECTHCGCRGCSG
SIO_010081: BUD31
subclass of: SO_0000673
so part of: BUD31
location: join(143306..143399,144033..144155,144364..144530,144837..144887)
location: region:143306-144887:1
so has part: feature:143306-143399:1:exon
so has part: feature:144033-144155:1:exon
so has part: feature:144364-144530:1:exon
so has part: feature:144837-144887:1:exon

XP_030315938.1
type: Protein
SIO_000068: ncbiprotein

position:143306:1
position: 143306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143306-143399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:144033-144155:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:144364-144530:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144837-144887:1:exon

BUD31
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: BUD31
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein BUD31 homolog isoform X2
translation: MPKVKRSRKPPPDGWELIEPTLDELDQKMREAETEPHEGKRKVESLWPIFRIHHQKTRYIFDLFYKRKAISRELYEYCIKEGYADKNLIAKWKKQGYENLCCLRCIQTRDTNFGTNCICRVPKSKLEVGRIIECTHCGCRGCSG
SIO_010081: BUD31
subclass of: SO_0000673
so part of: BUD31
location: join(143306..143399,144033..144155,144364..144530,144837..144887)
location: region:143306-144887:1
so has part: feature:143306-143399:1:exon
so has part: feature:144033-144155:1:exon
so has part: feature:144364-144530:1:exon
so has part: feature:144837-144887:1:exon

XP_030315939.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143306-143399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:144033-144155:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:144364-144530:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144837-144887:1:exon

BUD31
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: BUD31
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein BUD31 homolog isoform X2
translation: MPKVKRSRKPPPDGWELIEPTLDELDQKMREAETEPHEGKRKVESLWPIFRIHHQKTRYIFDLFYKRKAISRELYEYCIKEGYADKNLIAKWKKQGYENLCCLRCIQTRDTNFGTNCICRVPKSKLEVGRIIECTHCGCRGCSG
SIO_010081: BUD31
subclass of: SO_0000673
so part of: BUD31
location: join(143306..143399,144033..144155,144364..144530,144837..144887)
location: region:143306-144887:1
so has part: feature:143306-143399:1:exon
so has part: feature:144033-144155:1:exon
so has part: feature:144364-144530:1:exon
so has part: feature:144837-144887:1:exon

XP_030315940.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143306-143399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:144033-144155:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:144364-144530:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144837-144887:1:exon

BUD31
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: BUD31
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein BUD31 homolog isoform X2
translation: MPKVKRSRKPPPDGWELIEPTLDELDQKMREAETEPHEGKRKVESLWPIFRIHHQKTRYIFDLFYKRKAISRELYEYCIKEGYADKNLIAKWKKQGYENLCCLRCIQTRDTNFGTNCICRVPKSKLEVGRIIECTHCGCRGCSG
SIO_010081: BUD31
subclass of: SO_0000673
so part of: BUD31
location: join(143306..143399,144033..144155,144364..144530,144837..144887)
location: region:143306-144887:1
so has part: feature:143306-143399:1:exon
so has part: feature:144033-144155:1:exon
so has part: feature:144364-144530:1:exon
so has part: feature:144837-144887:1:exon

XP_030315941.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143306-143399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:144033-144155:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:144364-144530:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144837-144887:1:exon

PTCD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PTCD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(145569..149470)
location: region:145569-149470:-1
so has part: feature:145569-149470:-1:exon
subclass of: SO_0000010

103533105
type: Gene
SIO_000068: ncbigene

position:145569:-1
position: 145569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149470:-1
position: 149470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145569-149470:-1:exon

PTCD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PTCD1
product: pentatricopeptide repeat domain 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 long SRA reads, 12 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_008498930.2
SIO_010081: PTCD1
subclass of: SO_0000673
so part of: PTCD1
location: complement(join(145569..145882,146129..146311,146457..146573,146793..147530,147826..147927,148205..148423,148607..148747,148988..149470))
location: region:145569-149470:-1
so has part: feature:148988-149470:-1:exon
so has part: feature:148607-148747:-1:exon
so has part: feature:148205-148423:-1:exon
so has part: feature:147826-147927:-1:exon
so has part: feature:146793-147530:-1:exon
so has part: feature:146457-146573:-1:exon
so has part: feature:146129-146311:-1:exon
so has part: feature:145569-145882:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:148988-149470:-1:exon

position:148988:-1
position: 148988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:148607-148747:-1:exon

position:148607:-1
position: 148607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148747:-1
position: 148747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:148205-148423:-1:exon

position:148205:-1
position: 148205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148423:-1
position: 148423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:147826-147927:-1:exon

position:147826:-1
position: 147826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147927:-1
position: 147927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:146793-147530:-1:exon

position:146793:-1
position: 146793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147530:-1
position: 147530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:146457-146573:-1:exon

position:146457:-1
position: 146457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146573:-1
position: 146573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:146129-146311:-1:exon

position:146129:-1
position: 146129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146311:-1
position: 146311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:145569-145882:-1:exon

position:145882:-1
position: 145882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PTCD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PTCD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein 1, mitochondrial
translation: MKALRVFLPLRPLAWAAPEKPREALCLLRPSKRWSPPGWRPWCSSQNLPRSGPRESPAGEEEEDEGVEFGTLSNKFSSRKFYHKTTSSFRNLKLQEEEEDKPEGKRRRRPRNTPYWYFLQCKALIREDKLAEALELFEVQMLKEERLQPEESNYTVLIGGCGRVGYVKKAFRLYNDMKKRGLTPSEATYTALFNACAESPWKDSGLQSALKLRQQLKSKNKELNLVTYHALLKVCALCSDLRMCLDVLKEIVQKGHVPTAETFSFLLMGCIKDRASGFRYALQVWKEMAGLGIKGNSHTYNLMLRAARDCGIGDPALASQLLLTPTHQHCPQLRLTPGRQKGKSQKKGSEEAAAVQLDVEAMENQLFQEGLVQPENLLQLQNKEVPWADTEPAALSTAPSRTGVLVRSQNEMEQQQAHPSQELCSCKLPNLLDSVLPNAAVVSLGTVARPSDRLVLMGGVEGFLRKMKEDNAEPNIKTFTLLAELVEPQSPSESSLLALVDEHKVNVDVTFFNTLIRKKSKRGDLEGAKSLLPALVKRGLSPNLQTFCNLAIACHQEEDGLQLLTDLKRSGVTPNKFIYSTLISAAVRHLDYHYLTQILRDMRNNQVPPNEVIIRQLEFAAQYPPKFDRYKSKNIYLEKIDGFRGYYFRWLKVMAGEETPHPWAKYRVAKAGGGDDKEEVEQEQREL
SIO_010081: PTCD1
subclass of: SO_0000673
so part of: PTCD1
location: complement(join(145706..145882,146129..146311,146457..146573,146793..147530,147826..147927,148205..148423,148607..148747,148988..149374))
location: region:145706-149374:-1
so has part: feature:148988-149374:-1:exon
so has part: feature:148607-148747:-1:exon
so has part: feature:148205-148423:-1:exon
so has part: feature:147826-147927:-1:exon
so has part: feature:146793-147530:-1:exon
so has part: feature:146457-146573:-1:exon
so has part: feature:146129-146311:-1:exon
so has part: feature:145706-145882:-1:exon

XP_008497152.2
type: Protein
SIO_000068: ncbiprotein

position:145706:-1
position: 145706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149374:-1
position: 149374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148988-149374:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:148607-148747:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:148205-148423:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:147826-147927:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:146793-147530:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:146457-146573:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:146129-146311:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:145706-145882:-1:exon

CPSF4
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: CPSF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 149673..156235
location: region:149673-156235:1
so has part: feature:149673-156235:1:exon
subclass of: SO_0000010

103533104
type: Gene
SIO_000068: ncbigene

position:149673:1
position: 149673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156235:1
position: 156235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149673-156235:1:exon

CPSF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CPSF4
product: cleavage and polyadenylation specific factor 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030460073.1
SIO_010081: CPSF4
subclass of: SO_0000673
so part of: CPSF4
location: join(149673..149920,150762..150812,151062..151214,151964..152059,152409..152502,152925..152997,153664..153699,153797..153889,155159..156235)
location: region:149673-156235:1
so has part: feature:149673-149920:1:exon
so has part: feature:150762-150812:1:exon
so has part: feature:151062-151214:1:exon
so has part: feature:151964-152059:1:exon
so has part: feature:152409-152502:1:exon
so has part: feature:152925-152997:1:exon
so has part: feature:153664-153699:1:exon
so has part: feature:153797-153889:1:exon
so has part: feature:155159-156235:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:149673-149920:1:exon

position:149920:1
position: 149920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:150762-150812:1:exon

position:150762:1
position: 150762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150812:1
position: 150812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:151062-151214:1:exon

position:151062:1
position: 151062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151214:1
position: 151214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:151964-152059:1:exon

position:151964:1
position: 151964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152059:1
position: 152059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:152409-152502:1:exon

position:152409:1
position: 152409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152502:1
position: 152502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:152925-152997:1:exon

position:152925:1
position: 152925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152997:1
position: 152997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:153664-153699:1:exon

position:153664:1
position: 153664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153699:1
position: 153699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:153797-153889:1:exon

position:153797:1
position: 153797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153889:1
position: 153889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:155159-156235:1:exon

position:155159:1
position: 155159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CPSF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CPSF4
product: cleavage and polyadenylation specific factor 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030460074.1
SIO_010081: CPSF4
subclass of: SO_0000673
so part of: CPSF4
location: join(149674..149920,150762..150812,151062..151214,151964..152059,152409..152502,152925..152997,153797..153889,155159..156235)
location: region:149674-156235:1
so has part: feature:149674-149920:1:exon
so has part: feature:150762-150812:1:exon
so has part: feature:151062-151214:1:exon
so has part: feature:151964-152059:1:exon
so has part: feature:152409-152502:1:exon
so has part: feature:152925-152997:1:exon
so has part: feature:153797-153889:1:exon
so has part: feature:155159-156235:1:exon

position:149674:1
position: 149674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149674-149920:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:150762-150812:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:151062-151214:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:151964-152059:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:152409-152502:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:152925-152997:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:153797-153889:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:155159-156235:1:exon

CPSF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CPSF4
product: cleavage and polyadenylation specific factor 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030460075.1
SIO_010081: CPSF4
subclass of: SO_0000673
so part of: CPSF4
location: join(149674..149920,151062..151214,151964..152059,152409..152502,152925..152997,153664..153699,153797..153889,155159..156235)
location: region:149674-156235:1
so has part: feature:149674-149920:1:exon
so has part: feature:151062-151214:1:exon
so has part: feature:151964-152059:1:exon
so has part: feature:152409-152502:1:exon
so has part: feature:152925-152997:1:exon
so has part: feature:153664-153699:1:exon
so has part: feature:153797-153889:1:exon
so has part: feature:155159-156235:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:149674-149920:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:151062-151214:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:151964-152059:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:152409-152502:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:152925-152997:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:153664-153699:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:153797-153889:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:155159-156235:1:exon

CPSF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CPSF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleavage and polyadenylation specificity factor subunit 4 isoform X1
translation: MQELIASVDHIKFDLELAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPTCKFMHPRFELPMGTTEQPPLPQPTQTQQKLAEHPHRLEGKLRTPQVIGVMQSQNNNTGNRGPRPLEQVTCYKCGEKGHYANRCTKGHLAFLSGQ
SIO_010081: CPSF4
subclass of: SO_0000673
so part of: CPSF4
location: join(149818..149920,150762..150812,151062..151214,151964..152059,152409..152502,152925..152997,153664..153699,153797..153889,155159..155227)
location: region:149818-155227:1
so has part: feature:149818-149920:1:exon
so has part: feature:150762-150812:1:exon
so has part: feature:151062-151214:1:exon
so has part: feature:151964-152059:1:exon
so has part: feature:152409-152502:1:exon
so has part: feature:152925-152997:1:exon
so has part: feature:153664-153699:1:exon
so has part: feature:153797-153889:1:exon
so has part: feature:155159-155227:1:exon

XP_030315933.1
type: Protein
SIO_000068: ncbiprotein

position:149818:1
position: 149818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155227:1
position: 155227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149818-149920:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:150762-150812:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:151062-151214:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:151964-152059:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:152409-152502:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:152925-152997:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:153664-153699:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:153797-153889:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:155159-155227:1:exon

CPSF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CPSF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleavage and polyadenylation specificity factor subunit 4 isoform X2
translation: MQELIASVDHIKFDLELAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPTCKFMHPRFELPMGTTEQPPLPQPTQTQQKRTPQVIGVMQSQNNNTGNRGPRPLEQVTCYKCGEKGHYANRCTKGHLAFLSGQ
SIO_010081: CPSF4
subclass of: SO_0000673
so part of: CPSF4
location: join(149818..149920,150762..150812,151062..151214,151964..152059,152409..152502,152925..152997,153797..153889,155159..155227)
location: region:149818-155227:1
so has part: feature:149818-149920:1:exon
so has part: feature:150762-150812:1:exon
so has part: feature:151062-151214:1:exon
so has part: feature:151964-152059:1:exon
so has part: feature:152409-152502:1:exon
so has part: feature:152925-152997:1:exon
so has part: feature:153797-153889:1:exon
so has part: feature:155159-155227:1:exon

XP_030315934.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149818-149920:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:150762-150812:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:151062-151214:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:151964-152059:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:152409-152502:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:152925-152997:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:153797-153889:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:155159-155227:1:exon

CPSF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CPSF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleavage and polyadenylation specificity factor subunit 4 isoform X3
translation: MQELIASVDHIKFDLELAVEQQLGAQPLPFPGMDRGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPTCKFMHPRFELPMGTTEQPPLPQPTQTQQKLAEHPHRLEGKLRTPQVIGVMQSQNNNTGNRGPRPLEQVTCYKCGEKGHYANRCTKGHLAFLSGQ
SIO_010081: CPSF4
subclass of: SO_0000673
so part of: CPSF4
location: join(149818..149920,151062..151214,151964..152059,152409..152502,152925..152997,153664..153699,153797..153889,155159..155227)
location: region:149818-155227:1
so has part: feature:149818-149920:1:exon
so has part: feature:151062-151214:1:exon
so has part: feature:151964-152059:1:exon
so has part: feature:152409-152502:1:exon
so has part: feature:152925-152997:1:exon
so has part: feature:153664-153699:1:exon
so has part: feature:153797-153889:1:exon
so has part: feature:155159-155227:1:exon

XP_030315935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149818-149920:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:151062-151214:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:151964-152059:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:152409-152502:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:152925-152997:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:153664-153699:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:153797-153889:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:155159-155227:1:exon

LOC115599181
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599181
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(156614..164633)
location: region:156614-164633:-1
so has part: feature:156614-164633:-1:exon
subclass of: SO_0000011

115599181
type: Gene
SIO_000068: ncbigene

position:156614:-1
position: 156614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164633:-1
position: 164633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156614-164633:-1:exon

LOC115599181
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599181
product: uncharacterized LOC115599181
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003988187.1
SIO_010081: LOC115599181
subclass of: SO_0000673
so part of: LOC115599181
location: complement(join(156614..156626,164170..164240,164435..164633))
location: region:156614-164633:-1
so has part: feature:164435-164633:-1:exon
so has part: feature:164170-164240:-1:exon
so has part: feature:156614-156626:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:164435-164633:-1:exon

position:164435:-1
position: 164435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:164170-164240:-1:exon

position:164170:-1
position: 164170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164240:-1
position: 164240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:156614-156626:-1:exon

position:156626:-1
position: 156626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP5MF
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ATP5MF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(157416..159136)
location: region:157416-159136:-1
so has part: feature:157416-159136:-1:exon
subclass of: SO_0000010

103533074
type: Gene
SIO_000068: ncbigene

position:157416:-1
position: 157416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159136:-1
position: 159136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157416-159136:-1:exon

ATP5MF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ATP5MF
product: ATP synthase membrane subunit f
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_008498899.2
SIO_010081: ATP5MF
subclass of: SO_0000673
so part of: ATP5MF
location: complement(join(157416..157536,157898..158014,158853..158960,159051..159136))
location: region:157416-159136:-1
so has part: feature:159051-159136:-1:exon
so has part: feature:158853-158960:-1:exon
so has part: feature:157898-158014:-1:exon
so has part: feature:157416-157536:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:159051-159136:-1:exon

position:159051:-1
position: 159051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:158853-158960:-1:exon

position:158853:-1
position: 158853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158960:-1
position: 158960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:157898-158014:-1:exon

position:157898:-1
position: 157898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158014:-1
position: 158014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:157416-157536:-1:exon

position:157536:-1
position: 157536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP5MF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ATP5MF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase subunit f, mitochondrial
translation: MAQPVLLKDTKLLDVKLGQLPTWLAMRDFTPGGIMGAMQRGYERYYNKYINVKKGGLGGVSMVLAGYVVLSYVWSYSHIKHDRHRKYH
SIO_010081: ATP5MF
subclass of: SO_0000673
so part of: ATP5MF
location: complement(join(157508..157536,157898..158014,158853..158960,159051..159063))
location: region:157508-159063:-1
so has part: feature:159051-159063:-1:exon
so has part: feature:158853-158960:-1:exon
so has part: feature:157898-158014:-1:exon
so has part: feature:157508-157536:-1:exon

XP_008497121.1
type: Protein
SIO_000068: ncbiprotein

position:157508:-1
position: 157508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159063:-1
position: 159063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159051-159063:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158853-158960:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:157898-158014:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:157508-157536:-1:exon

LOC115599180
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599180
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 158936..169735
location: region:158936-169735:1
so has part: feature:158936-169735:1:exon
subclass of: SO_0000011

115599180
type: Gene
SIO_000068: ncbigene

position:158936:1
position: 158936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169735:1
position: 169735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158936-169735:1:exon

LOC115599180
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599180
product: uncharacterized LOC115599180
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988186.1
SIO_010081: LOC115599180
subclass of: SO_0000673
so part of: LOC115599180
location: join(158936..158994,160041..160161,164346..164430,168061..168162,169294..169735)
location: region:158936-169735:1
so has part: feature:158936-158994:1:exon
so has part: feature:160041-160161:1:exon
so has part: feature:164346-164430:1:exon
so has part: feature:168061-168162:1:exon
so has part: feature:169294-169735:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:158936-158994:1:exon

position:158994:1
position: 158994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:160041-160161:1:exon

position:160041:1
position: 160041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160161:1
position: 160161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:164346-164430:1:exon

position:164346:1
position: 164346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164430:1
position: 164430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:168061-168162:1:exon

position:168061:1
position: 168061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168162:1
position: 168162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:169294-169735:1:exon

position:169294:1
position: 169294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115599150
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599150
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 199405..203503
location: region:199405-203503:1
so has part: feature:199405-203503:1:exon
subclass of: SO_0000011

115599150
type: Gene
SIO_000068: ncbigene

position:199405:1
position: 199405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203503:1
position: 203503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199405-203503:1:exon

LOC115599150
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599150
product: uncharacterized LOC115599150, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988173.1
SIO_010081: LOC115599150
subclass of: SO_0000673
so part of: LOC115599150
location: join(199405..199545,200258..200360,201725..201901,203378..203503)
location: region:199405-203503:1
so has part: feature:199405-199545:1:exon
so has part: feature:200258-200360:1:exon
so has part: feature:201725-201901:1:exon
so has part: feature:203378-203503:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:199405-199545:1:exon

position:199545:1
position: 199545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:200258-200360:1:exon

position:200258:1
position: 200258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200360:1
position: 200360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:201725-201901:1:exon

position:201725:1
position: 201725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201901:1
position: 201901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:203378-203503:1:exon

position:203378:1
position: 203378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115599150
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599150
product: uncharacterized LOC115599150, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988172.1
SIO_010081: LOC115599150
subclass of: SO_0000673
so part of: LOC115599150
location: join(199405..199545,200258..200360,201725..202265)
location: region:199405-202265:1
so has part: feature:199405-199545:1:exon
so has part: feature:200258-200360:1:exon
so has part: feature:201725-202265:1:exon

position:202265:1
position: 202265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199405-199545:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200258-200360:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:201725-202265:1:exon

LOC103533073
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103533073
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(210278..240130)
location: region:210278-240130:-1
so has part: feature:210278-240130:-1:exon
subclass of: SO_0000010

103533073
type: Gene
SIO_000068: ncbigene

position:210278:-1
position: 210278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240130:-1
position: 240130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210278-240130:-1:exon

LOC103533073
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103533073
product: potassium inwardly rectifying channel subfamily J member 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 61 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_008498898.2
SIO_010081: LOC103533073
subclass of: SO_0000673
so part of: LOC103533073
location: complement(join(210278..212165,239588..240130))
location: region:210278-240130:-1
so has part: feature:239588-240130:-1:exon
so has part: feature:210278-212165:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:239588-240130:-1:exon

position:239588:-1
position: 239588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:210278-212165:-1:exon

position:212165:-1
position: 212165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103533073
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103533073
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-sensitive inward rectifier potassium channel 12
translation: MTAGRVNPYSIVSSEEDGLRLTTMPGINGFGNGKIHTRRKCRNRFVKKNGQCNVEFTNMDDKPQRYIADMFTTCVDIRWRYMLLLFSLAFLVSWLLFGLIFWLIALIHGDLENPGGDDTFKPCVLQVNGFVAAFLFSIETQTTIGYGFRCVTEECPLAVFMVVVQSIVGCIIDSFMIGAIMAKMARPKKRAQTLLFSHNAVVAMRDGKLCLMWRVGNLRKSHIVEAHVRAQLIKPRITEEGEYIPLDQIDIDVGFDKGLDRIFLVSPITILHEINEDSPLFGISRQDLETDDFEIVVILEGMVEATAMTTQARSSYLASEILWGHRFEPVLFEEKNQYKVDYSHFHKTYEVPSTPRCSAKDLVENKFLLPSTNSFCYENELAFMSRDEEEEDDDSRGLEDLSPDNRHEFDRLQATIALDQRSYRRESEI
SIO_010081: LOC103533073
subclass of: SO_0000673
so part of: LOC103533073
location: complement(210718..212007)
location: region:210718-212007:-1
so has part: feature:210718-212007:-1:exon

XP_008497120.1
type: Protein
SIO_000068: ncbiprotein

position:210718:-1
position: 210718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212007:-1
position: 212007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210718-212007:-1:exon

MAP2K3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: MAP2K3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(272902..305898)
location: region:272902-305898:-1
so has part: feature:272902-305898:-1:exon
subclass of: SO_0000010

103533072
type: Gene
SIO_000068: ncbigene

position:272902:-1
position: 272902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305898:-1
position: 305898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272902-305898:-1:exon

MAP2K3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MAP2K3
product: mitogen-activated protein kinase kinase 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 long SRA read, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030459628.1
SIO_010081: MAP2K3
subclass of: SO_0000673
so part of: MAP2K3
location: complement(join(272902..275614,276046..276091,276848..276987,279034..279111,279728..279855,280062..280113,280267..280383,280848..280967,281407..281520,284385..284433,286900..286969,287077..287109,305810..305898))
location: region:272902-305898:-1
so has part: feature:305810-305898:-1:exon
so has part: feature:287077-287109:-1:exon
so has part: feature:286900-286969:-1:exon
so has part: feature:284385-284433:-1:exon
so has part: feature:281407-281520:-1:exon
so has part: feature:280848-280967:-1:exon
so has part: feature:280267-280383:-1:exon
so has part: feature:280062-280113:-1:exon
so has part: feature:279728-279855:-1:exon
so has part: feature:279034-279111:-1:exon
so has part: feature:276848-276987:-1:exon
so has part: feature:276046-276091:-1:exon
so has part: feature:272902-275614:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:305810-305898:-1:exon

position:305810:-1
position: 305810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:287077-287109:-1:exon

position:287077:-1
position: 287077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287109:-1
position: 287109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:286900-286969:-1:exon

position:286900:-1
position: 286900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286969:-1
position: 286969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:284385-284433:-1:exon

position:284385:-1
position: 284385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284433:-1
position: 284433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:281407-281520:-1:exon

position:281407:-1
position: 281407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281520:-1
position: 281520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:280848-280967:-1:exon

position:280848:-1
position: 280848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280967:-1
position: 280967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:280267-280383:-1:exon

position:280267:-1
position: 280267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280383:-1
position: 280383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:280062-280113:-1:exon

position:280062:-1
position: 280062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280113:-1
position: 280113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:279728-279855:-1:exon

position:279728:-1
position: 279728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279855:-1
position: 279855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:279034-279111:-1:exon

position:279034:-1
position: 279034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279111:-1
position: 279111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:276848-276987:-1:exon

position:276848:-1
position: 276848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276987:-1
position: 276987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:276046-276091:-1:exon

position:276046:-1
position: 276046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276091:-1
position: 276091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:272902-275614:-1:exon

position:275614:-1
position: 275614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MAP2K3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MAP2K3
product: mitogen-activated protein kinase kinase 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030459626.1
SIO_010081: MAP2K3
subclass of: SO_0000673
so part of: MAP2K3
location: complement(join(272902..275614,276046..276091,276848..276987,279034..279111,279728..279855,280062..280113,280267..280383,280848..280967,281407..281520,284385..284433,286900..286969,287077..287109,304745..304901))
location: region:272902-304901:-1
so has part: feature:304745-304901:-1:exon
so has part: feature:287077-287109:-1:exon
so has part: feature:286900-286969:-1:exon
so has part: feature:284385-284433:-1:exon
so has part: feature:281407-281520:-1:exon
so has part: feature:280848-280967:-1:exon
so has part: feature:280267-280383:-1:exon
so has part: feature:280062-280113:-1:exon
so has part: feature:279728-279855:-1:exon
so has part: feature:279034-279111:-1:exon
so has part: feature:276848-276987:-1:exon
so has part: feature:276046-276091:-1:exon
so has part: feature:272902-275614:-1:exon

position:304901:-1
position: 304901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304745-304901:-1:exon

position:304745:-1
position: 304745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:287077-287109:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:286900-286969:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284385-284433:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:281407-281520:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280848-280967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280267-280383:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:280062-280113:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:279728-279855:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:279034-279111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:276848-276987:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:276046-276091:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:272902-275614:-1:exon

MAP2K3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MAP2K3
product: mitogen-activated protein kinase kinase 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030459629.1
SIO_010081: MAP2K3
subclass of: SO_0000673
so part of: MAP2K3
location: complement(join(272902..275614,276046..276091,276848..276987,279034..279111,279728..279855,280062..280113,280267..280383,280848..280967,281407..281520,284385..284433,286900..286969,287077..287109,291897..291946,292051..292216))
location: region:272902-292216:-1
so has part: feature:292051-292216:-1:exon
so has part: feature:291897-291946:-1:exon
so has part: feature:287077-287109:-1:exon
so has part: feature:286900-286969:-1:exon
so has part: feature:284385-284433:-1:exon
so has part: feature:281407-281520:-1:exon
so has part: feature:280848-280967:-1:exon
so has part: feature:280267-280383:-1:exon
so has part: feature:280062-280113:-1:exon
so has part: feature:279728-279855:-1:exon
so has part: feature:279034-279111:-1:exon
so has part: feature:276848-276987:-1:exon
so has part: feature:276046-276091:-1:exon
so has part: feature:272902-275614:-1:exon

position:292216:-1
position: 292216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292051-292216:-1:exon

position:292051:-1
position: 292051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:291897-291946:-1:exon

position:291897:-1
position: 291897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291946:-1
position: 291946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:287077-287109:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:286900-286969:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:284385-284433:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:281407-281520:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280848-280967:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:280267-280383:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:280062-280113:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:279728-279855:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:279034-279111:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:276848-276987:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:276046-276091:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:272902-275614:-1:exon

MAP2K3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MAP2K3
product: mitogen-activated protein kinase kinase 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_008498897.2
SIO_010081: MAP2K3
subclass of: SO_0000673
so part of: MAP2K3
location: complement(join(272902..275614,276046..276091,276848..276987,279034..279111,279728..279855,280062..280113,280267..280383,280848..280967,281407..281520,284385..284433,286900..286969,287077..287109,291897..292216))
location: region:272902-292216:-1
so has part: feature:291897-292216:-1:exon
so has part: feature:287077-287109:-1:exon
so has part: feature:286900-286969:-1:exon
so has part: feature:284385-284433:-1:exon
so has part: feature:281407-281520:-1:exon
so has part: feature:280848-280967:-1:exon
so has part: feature:280267-280383:-1:exon
so has part: feature:280062-280113:-1:exon
so has part: feature:279728-279855:-1:exon
so has part: feature:279034-279111:-1:exon
so has part: feature:276848-276987:-1:exon
so has part: feature:276046-276091:-1:exon
so has part: feature:272902-275614:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:291897-292216:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:287077-287109:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:286900-286969:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284385-284433:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:281407-281520:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280848-280967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280267-280383:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:280062-280113:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:279728-279855:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:279034-279111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:276848-276987:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:276046-276091:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:272902-275614:-1:exon

MAP2K3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MAP2K3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity mitogen-activated protein kinase kinase 3 isoform X2
translation: MSLPRDSKGSLEPHKPVKSKKKRELRITCVPIKQPVANTTPPRNLDSRTFITIGDKNFEVEADDLVTISELGRGAYGVVEKVRHAQSGTIMAVKRIRATVNTQEQKRLLMDLDISMRTVDCFYTVTFYGALFREGDVWICMELMDTSLDKFYKKVLEKKKTIPEDILGKMAVSIVRALEHLHSKLSVIHRDVKPSNVLINKEGHVKMCDFGISGYLVDSVAKTMDAGCKPYMAPERINPELNQKGYNVKSDVWSLGITMIELAILRFPYESWGTPFQQLKQVVEEPSPQLPPERFSKEFVDFTAQCLRKNPAERMNYLELMEHPFFTLHDTKETDMASFVTEILGEDS
SIO_010081: MAP2K3
subclass of: SO_0000673
so part of: MAP2K3
location: complement(join(275531..275614,276046..276091,276848..276987,279034..279111,279728..279855,280062..280113,280267..280383,280848..280967,281407..281520,284385..284433,286900..286969,287077..287109,305810..305825))
location: region:275531-305825:-1
so has part: feature:305810-305825:-1:exon
so has part: feature:287077-287109:-1:exon
so has part: feature:286900-286969:-1:exon
so has part: feature:284385-284433:-1:exon
so has part: feature:281407-281520:-1:exon
so has part: feature:280848-280967:-1:exon
so has part: feature:280267-280383:-1:exon
so has part: feature:280062-280113:-1:exon
so has part: feature:279728-279855:-1:exon
so has part: feature:279034-279111:-1:exon
so has part: feature:276848-276987:-1:exon
so has part: feature:276046-276091:-1:exon
so has part: feature:275531-275614:-1:exon

XP_030315488.1
type: Protein
SIO_000068: ncbiprotein

position:275531:-1
position: 275531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305825:-1
position: 305825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305810-305825:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:287077-287109:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:286900-286969:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284385-284433:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:281407-281520:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280848-280967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280267-280383:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:280062-280113:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:279728-279855:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:279034-279111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:276848-276987:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:276046-276091:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:275531-275614:-1:exon

MAP2K3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MAP2K3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity mitogen-activated protein kinase kinase 3 isoform X1
translation: MSPATIPCWKRDQPDLLKRLSPGHLSPDLLLGSRVPWQRVDVWMEGRDSKGSLEPHKPVKSKKKRELRITCVPIKQPVANTTPPRNLDSRTFITIGDKNFEVEADDLVTISELGRGAYGVVEKVRHAQSGTIMAVKRIRATVNTQEQKRLLMDLDISMRTVDCFYTVTFYGALFREGDVWICMELMDTSLDKFYKKVLEKKKTIPEDILGKMAVSIVRALEHLHSKLSVIHRDVKPSNVLINKEGHVKMCDFGISGYLVDSVAKTMDAGCKPYMAPERINPELNQKGYNVKSDVWSLGITMIELAILRFPYESWGTPFQQLKQVVEEPSPQLPPERFSKEFVDFTAQCLRKNPAERMNYLELMEHPFFTLHDTKETDMASFVTEILGEDS
SIO_010081: MAP2K3
subclass of: SO_0000673
so part of: MAP2K3
location: complement(join(275531..275614,276046..276091,276848..276987,279034..279111,279728..279855,280062..280113,280267..280383,280848..280967,281407..281520,284385..284433,286900..286969,287077..287109,304745..304886))
location: region:275531-304886:-1
so has part: feature:304745-304886:-1:exon
so has part: feature:287077-287109:-1:exon
so has part: feature:286900-286969:-1:exon
so has part: feature:284385-284433:-1:exon
so has part: feature:281407-281520:-1:exon
so has part: feature:280848-280967:-1:exon
so has part: feature:280267-280383:-1:exon
so has part: feature:280062-280113:-1:exon
so has part: feature:279728-279855:-1:exon
so has part: feature:279034-279111:-1:exon
so has part: feature:276848-276987:-1:exon
so has part: feature:276046-276091:-1:exon
so has part: feature:275531-275614:-1:exon

XP_030315486.1
type: Protein
SIO_000068: ncbiprotein

position:304886:-1
position: 304886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304745-304886:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:287077-287109:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:286900-286969:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284385-284433:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:281407-281520:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280848-280967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280267-280383:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:280062-280113:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:279728-279855:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:279034-279111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:276848-276987:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:276046-276091:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:275531-275614:-1:exon

MAP2K3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MAP2K3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity mitogen-activated protein kinase kinase 3 isoform X3
translation: MDKKQDSKGSLEPHKPVKSKKKRELRITCVPIKQPVANTTPPRNLDSRTFITIGDKNFEVEADDLVTISELGRGAYGVVEKVRHAQSGTIMAVKRIRATVNTQEQKRLLMDLDISMRTVDCFYTVTFYGALFREGDVWICMELMDTSLDKFYKKVLEKKKTIPEDILGKMAVSIVRALEHLHSKLSVIHRDVKPSNVLINKEGHVKMCDFGISGYLVDSVAKTMDAGCKPYMAPERINPELNQKGYNVKSDVWSLGITMIELAILRFPYESWGTPFQQLKQVVEEPSPQLPPERFSKEFVDFTAQCLRKNPAERMNYLELMEHPFFTLHDTKETDMASFVTEILGEDS
SIO_010081: MAP2K3
subclass of: SO_0000673
so part of: MAP2K3
location: complement(join(275531..275614,276046..276091,276848..276987,279034..279111,279728..279855,280062..280113,280267..280383,280848..280967,281407..281520,284385..284433,286900..286969,287077..287109,291897..291912))
location: region:275531-291912:-1
so has part: feature:291897-291912:-1:exon
so has part: feature:287077-287109:-1:exon
so has part: feature:286900-286969:-1:exon
so has part: feature:284385-284433:-1:exon
so has part: feature:281407-281520:-1:exon
so has part: feature:280848-280967:-1:exon
so has part: feature:280267-280383:-1:exon
so has part: feature:280062-280113:-1:exon
so has part: feature:279728-279855:-1:exon
so has part: feature:279034-279111:-1:exon
so has part: feature:276848-276987:-1:exon
so has part: feature:276046-276091:-1:exon
so has part: feature:275531-275614:-1:exon

XP_030315489.1
type: Protein
SIO_000068: ncbiprotein

position:291912:-1
position: 291912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291897-291912:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:287077-287109:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:286900-286969:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284385-284433:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:281407-281520:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280848-280967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280267-280383:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:280062-280113:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:279728-279855:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:279034-279111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:276848-276987:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:276046-276091:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:275531-275614:-1:exon

MAP2K3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MAP2K3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity mitogen-activated protein kinase kinase 3 isoform X3
translation: MDKKQDSKGSLEPHKPVKSKKKRELRITCVPIKQPVANTTPPRNLDSRTFITIGDKNFEVEADDLVTISELGRGAYGVVEKVRHAQSGTIMAVKRIRATVNTQEQKRLLMDLDISMRTVDCFYTVTFYGALFREGDVWICMELMDTSLDKFYKKVLEKKKTIPEDILGKMAVSIVRALEHLHSKLSVIHRDVKPSNVLINKEGHVKMCDFGISGYLVDSVAKTMDAGCKPYMAPERINPELNQKGYNVKSDVWSLGITMIELAILRFPYESWGTPFQQLKQVVEEPSPQLPPERFSKEFVDFTAQCLRKNPAERMNYLELMEHPFFTLHDTKETDMASFVTEILGEDS
SIO_010081: MAP2K3
subclass of: SO_0000673
so part of: MAP2K3
location: complement(join(275531..275614,276046..276091,276848..276987,279034..279111,279728..279855,280062..280113,280267..280383,280848..280967,281407..281520,284385..284433,286900..286969,287077..287109,291897..291912))
location: region:275531-291912:-1
so has part: feature:291897-291912:-1:exon
so has part: feature:287077-287109:-1:exon
so has part: feature:286900-286969:-1:exon
so has part: feature:284385-284433:-1:exon
so has part: feature:281407-281520:-1:exon
so has part: feature:280848-280967:-1:exon
so has part: feature:280267-280383:-1:exon
so has part: feature:280062-280113:-1:exon
so has part: feature:279728-279855:-1:exon
so has part: feature:279034-279111:-1:exon
so has part: feature:276848-276987:-1:exon
so has part: feature:276046-276091:-1:exon
so has part: feature:275531-275614:-1:exon

XP_008497119.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291897-291912:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:287077-287109:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:286900-286969:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284385-284433:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:281407-281520:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280848-280967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280267-280383:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:280062-280113:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:279728-279855:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:279034-279111:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:276848-276987:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:276046-276091:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:275531-275614:-1:exon

NATD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: NATD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 307367..317785
location: region:307367-317785:1
so has part: feature:307367-317785:1:exon
subclass of: SO_0000010

103533103
type: Gene
SIO_000068: ncbigene

position:307367:1
position: 307367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317785:1
position: 317785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307367-317785:1:exon

NATD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NATD1
product: N-acetyltransferase domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030459617.1
SIO_010081: NATD1
subclass of: SO_0000673
so part of: NATD1
location: join(307367..307650,313737..313855,314521..317785)
location: region:307367-317785:1
so has part: feature:307367-307650:1:exon
so has part: feature:313737-313855:1:exon
so has part: feature:314521-317785:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:307367-307650:1:exon

position:307650:1
position: 307650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:313737-313855:1:exon

position:313737:1
position: 313737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313855:1
position: 313855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:314521-317785:1:exon

position:314521:1
position: 314521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NATD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NATD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NATD1
translation: MAHSAPLGLLDQGCPIQVEHDRKRRQFTVRLNGCHDKAVLLYEYVGKRIVDLQHTEVPDAYRGRGIAKHLAKAALDFVVEEDLKAHLTCWYIQKYVKENPLPQYLEHLQP
SIO_010081: NATD1
subclass of: SO_0000673
so part of: NATD1
location: join(307554..307650,313737..313855,314521..314637)
location: region:307554-314637:1
so has part: feature:307554-307650:1:exon
so has part: feature:313737-313855:1:exon
so has part: feature:314521-314637:1:exon

XP_030315477.1
type: Protein
SIO_000068: ncbiprotein

position:307554:1
position: 307554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314637:1
position: 314637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307554-307650:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:313737-313855:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:314521-314637:1:exon

TMEM11
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: TMEM11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 320125..329716
location: region:320125-329716:1
so has part: feature:320125-329716:1:exon
subclass of: SO_0000010

103533102
type: Gene
SIO_000068: ncbigene

position:320125:1
position: 320125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329716:1
position: 329716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320125-329716:1:exon

TMEM11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TMEM11
product: transmembrane protein 11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 33 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030459616.1
SIO_010081: TMEM11
subclass of: SO_0000673
so part of: TMEM11
location: join(320125..320404,328782..329716)
location: region:320125-329716:1
so has part: feature:320125-320404:1:exon
so has part: feature:328782-329716:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:320125-320404:1:exon

position:320404:1
position: 320404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:328782-329716:1:exon

position:328782:1
position: 328782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TMEM11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 11, mitochondrial
translation: MAAWGRRRAGPGSTNSGGGRERVTLSSTDCYIVHEIYNGENAQDQFEYELEQALEAQYKYIVIEPTRIGDETARWITVGNCLHKTAVLAGTTCLFTPLALPVDYSHYISLPAGVLSVACCTLYGISWQFDPCCKYQVEYDAYKLSRLPLHTLTSSTPVVLVRKDDLHRKRLHNTIALAALVYCVKKIYELYAV
SIO_010081: TMEM11
subclass of: SO_0000673
so part of: TMEM11
location: join(320340..320404,328782..329298)
location: region:320340-329298:1
so has part: feature:320340-320404:1:exon
so has part: feature:328782-329298:1:exon

XP_030315476.1
type: Protein
SIO_000068: ncbiprotein

position:320340:1
position: 320340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329298:1
position: 329298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320340-320404:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328782-329298:1:exon

DHRS7B
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: DHRS7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(332634..344489)
location: region:332634-344489:-1
so has part: feature:332634-344489:-1:exon
subclass of: SO_0000010

103533071
type: Gene
SIO_000068: ncbigene

position:332634:-1
position: 332634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344489:-1
position: 344489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332634-344489:-1:exon

DHRS7B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: DHRS7B
product: dehydrogenase/reductase 7B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 long SRA read, 13 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_030459841.1
SIO_010081: DHRS7B
subclass of: SO_0000673
so part of: DHRS7B
location: complement(join(332634..334041,334367..334519,335354..335446,336089..336299,336955..337070,338783..338958,344414..344489))
location: region:332634-344489:-1
so has part: feature:344414-344489:-1:exon
so has part: feature:338783-338958:-1:exon
so has part: feature:336955-337070:-1:exon
so has part: feature:336089-336299:-1:exon
so has part: feature:335354-335446:-1:exon
so has part: feature:334367-334519:-1:exon
so has part: feature:332634-334041:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:344414-344489:-1:exon

position:344414:-1
position: 344414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:338783-338958:-1:exon

position:338783:-1
position: 338783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338958:-1
position: 338958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:336955-337070:-1:exon

position:336955:-1
position: 336955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337070:-1
position: 337070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:336089-336299:-1:exon

position:336089:-1
position: 336089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336299:-1
position: 336299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:335354-335446:-1:exon

position:335354:-1
position: 335354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335446:-1
position: 335446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:334367-334519:-1:exon

position:334367:-1
position: 334367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334519:-1
position: 334519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:332634-334041:-1:exon

position:334041:-1
position: 334041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DHRS7B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: DHRS7B
product: dehydrogenase/reductase 7B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 long SRA read, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030459843.1
SIO_010081: DHRS7B
subclass of: SO_0000673
so part of: DHRS7B
location: complement(join(332634..334041,334367..334519,335354..335446,336089..336299,336955..337070,338783..338958,344225..344244))
location: region:332634-344244:-1
so has part: feature:344225-344244:-1:exon
so has part: feature:338783-338958:-1:exon
so has part: feature:336955-337070:-1:exon
so has part: feature:336089-336299:-1:exon
so has part: feature:335354-335446:-1:exon
so has part: feature:334367-334519:-1:exon
so has part: feature:332634-334041:-1:exon

position:344244:-1
position: 344244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344225-344244:-1:exon

position:344225:-1
position: 344225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:338783-338958:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:336955-337070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:336089-336299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:335354-335446:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:334367-334519:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:332634-334041:-1:exon

DHRS7B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: DHRS7B
product: dehydrogenase/reductase 7B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 long SRA read, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030459842.1
SIO_010081: DHRS7B
subclass of: SO_0000673
so part of: DHRS7B
location: complement(join(332634..334041,334367..334519,335354..335446,336089..336299,336955..337070,338783..338958,342544..342810))
location: region:332634-342810:-1
so has part: feature:342544-342810:-1:exon
so has part: feature:338783-338958:-1:exon
so has part: feature:336955-337070:-1:exon
so has part: feature:336089-336299:-1:exon
so has part: feature:335354-335446:-1:exon
so has part: feature:334367-334519:-1:exon
so has part: feature:332634-334041:-1:exon

position:342810:-1
position: 342810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342544-342810:-1:exon

position:342544:-1
position: 342544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:338783-338958:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:336955-337070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:336089-336299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:335354-335446:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:334367-334519:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:332634-334041:-1:exon

DHRS7B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: DHRS7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dehydrogenase/reductase SDR family member 7B isoform X1
translation: MVTAAARQTVQRGKLMDLTSTVIIPLLFGSLGIFAVFRLLQWMRMRAHLQKAVVVITGATSGLGKECAKVFHAAGSKLVLCGRDSEKLKDLVQELSTMTNHHQNAHKPHTVVFDLSDTKSVLNAAEEILKYLGHVDILINNAGISFRGTVVDTRLDVDKKVMETNYFGPIALTKALLPSMIKRRQGHIVAISSVQGKISIPFRSAYAASKHATQAFFDCLRAEVEQYDIDVTVISPGYIQTNLSLNAVTADGSRYGVMDKNTAEGQSAAEVARVVLRAVGQKKKEVLVAGLTPCLAVYLRNLCPRLFFTLMAARAKKERKAKGS
SIO_010081: DHRS7B
subclass of: SO_0000673
so part of: DHRS7B
location: complement(join(333836..334041,334367..334519,335354..335446,336089..336299,336955..337070,338783..338958,344414..344433))
location: region:333836-344433:-1
so has part: feature:344414-344433:-1:exon
so has part: feature:338783-338958:-1:exon
so has part: feature:336955-337070:-1:exon
so has part: feature:336089-336299:-1:exon
so has part: feature:335354-335446:-1:exon
so has part: feature:334367-334519:-1:exon
so has part: feature:333836-334041:-1:exon

XP_030315701.1
type: Protein
SIO_000068: ncbiprotein

position:333836:-1
position: 333836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344433:-1
position: 344433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344414-344433:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:338783-338958:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:336955-337070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:336089-336299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:335354-335446:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:334367-334519:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:333836-334041:-1:exon

DHRS7B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: DHRS7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dehydrogenase/reductase SDR family member 7B isoform X2
translation: MDLTSTVIIPLLFGSLGIFAVFRLLQWMRMRAHLQKAVVVITGATSGLGKECAKVFHAAGSKLVLCGRDSEKLKDLVQELSTMTNHHQNAHKPHTVVFDLSDTKSVLNAAEEILKYLGHVDILINNAGISFRGTVVDTRLDVDKKVMETNYFGPIALTKALLPSMIKRRQGHIVAISSVQGKISIPFRSAYAASKHATQAFFDCLRAEVEQYDIDVTVISPGYIQTNLSLNAVTADGSRYGVMDKNTAEGQSAAEVARVVLRAVGQKKKEVLVAGLTPCLAVYLRNLCPRLFFTLMAARAKKERKAKGS
SIO_010081: DHRS7B
subclass of: SO_0000673
so part of: DHRS7B
location: complement(join(333836..334041,334367..334519,335354..335446,336089..336299,336955..337070,338783..338933))
location: region:333836-338933:-1
so has part: feature:338783-338933:-1:exon
so has part: feature:336955-337070:-1:exon
so has part: feature:336089-336299:-1:exon
so has part: feature:335354-335446:-1:exon
so has part: feature:334367-334519:-1:exon
so has part: feature:333836-334041:-1:exon

XP_030315702.1
type: Protein
SIO_000068: ncbiprotein

position:338933:-1
position: 338933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338783-338933:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:336955-337070:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:336089-336299:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:335354-335446:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:334367-334519:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:333836-334041:-1:exon

DHRS7B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: DHRS7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dehydrogenase/reductase SDR family member 7B isoform X2
translation: MDLTSTVIIPLLFGSLGIFAVFRLLQWMRMRAHLQKAVVVITGATSGLGKECAKVFHAAGSKLVLCGRDSEKLKDLVQELSTMTNHHQNAHKPHTVVFDLSDTKSVLNAAEEILKYLGHVDILINNAGISFRGTVVDTRLDVDKKVMETNYFGPIALTKALLPSMIKRRQGHIVAISSVQGKISIPFRSAYAASKHATQAFFDCLRAEVEQYDIDVTVISPGYIQTNLSLNAVTADGSRYGVMDKNTAEGQSAAEVARVVLRAVGQKKKEVLVAGLTPCLAVYLRNLCPRLFFTLMAARAKKERKAKGS
SIO_010081: DHRS7B
subclass of: SO_0000673
so part of: DHRS7B
location: complement(join(333836..334041,334367..334519,335354..335446,336089..336299,336955..337070,338783..338933))
location: region:333836-338933:-1
so has part: feature:338783-338933:-1:exon
so has part: feature:336955-337070:-1:exon
so has part: feature:336089-336299:-1:exon
so has part: feature:335354-335446:-1:exon
so has part: feature:334367-334519:-1:exon
so has part: feature:333836-334041:-1:exon

XP_030315703.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:338783-338933:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:336955-337070:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:336089-336299:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:335354-335446:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:334367-334519:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:333836-334041:-1:exon

USP22
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: USP22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 361796..449339
location: region:361796-449339:1
so has part: feature:361796-449339:1:exon
subclass of: SO_0000010

103533070
type: Gene
SIO_000068: ncbigene

position:361796:1
position: 361796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449339:1
position: 449339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361796-449339:1:exon

USP22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: USP22
product: ubiquitin specific peptidase 22, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030459798.1
SIO_010081: USP22
subclass of: SO_0000673
so part of: USP22
location: join(361796..361814,390587..390719,399200..399313,399880..399924,404746..404847,422433..422602,429166..429313,432667..432756,436195..436300,437971..438129,440049..440175,443098..443189,444595..444657,446531..446680,448414..449339)
location: region:361796-449339:1
so has part: feature:361796-361814:1:exon
so has part: feature:390587-390719:1:exon
so has part: feature:399200-399313:1:exon
so has part: feature:399880-399924:1:exon
so has part: feature:404746-404847:1:exon
so has part: feature:422433-422602:1:exon
so has part: feature:429166-429313:1:exon
so has part: feature:432667-432756:1:exon
so has part: feature:436195-436300:1:exon
so has part: feature:437971-438129:1:exon
so has part: feature:440049-440175:1:exon
so has part: feature:443098-443189:1:exon
so has part: feature:444595-444657:1:exon
so has part: feature:446531-446680:1:exon
so has part: feature:448414-449339:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:361796-361814:1:exon

position:361814:1
position: 361814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:390587-390719:1:exon

position:390587:1
position: 390587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390719:1
position: 390719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:399200-399313:1:exon

position:399200:1
position: 399200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399313:1
position: 399313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:399880-399924:1:exon

position:399880:1
position: 399880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399924:1
position: 399924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:404746-404847:1:exon

position:404746:1
position: 404746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404847:1
position: 404847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:422433-422602:1:exon

position:422433:1
position: 422433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422602:1
position: 422602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:429166-429313:1:exon

position:429166:1
position: 429166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429313:1
position: 429313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:432667-432756:1:exon

position:432667:1
position: 432667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432756:1
position: 432756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:436195-436300:1:exon

position:436195:1
position: 436195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436300:1
position: 436300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:437971-438129:1:exon

position:437971:1
position: 437971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438129:1
position: 438129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:440049-440175:1:exon

position:440049:1
position: 440049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440175:1
position: 440175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:443098-443189:1:exon

position:443098:1
position: 443098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443189:1
position: 443189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:444595-444657:1:exon

position:444595:1
position: 444595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444657:1
position: 444657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:446531-446680:1:exon

position:446531:1
position: 446531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446680:1
position: 446680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:448414-449339:1:exon

position:448414:1
position: 448414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

USP22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: USP22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 22 isoform X6
translation: MAKSCICHMCGAHLNRLHSCLYCVFFGCFTKKHIHEHAKTKRHNLAIDLLYGGIYCFMCQDYIYDKDMEQIAKEEQRKAWKLQAFTPTVVSHYQCTMTGIGEKYSTWEPTKRELELLRHNPKRRKITTNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPSSCLVCEMSTLFQEFYSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKDSSIKNKCKAYLSLRVRSFRSSRALHFLEKCDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDGSVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEYE
SIO_010081: USP22
subclass of: SO_0000673
so part of: USP22
location: join(361812..361814,390587..390719,399200..399313,399880..399924,404746..404847,422433..422602,429166..429313,432667..432756,436195..436300,437971..438129,440049..440175,443098..443189,444595..444657,446531..446680,448414..448456)
location: region:361812-448456:1
so has part: feature:361812-361814:1:exon
so has part: feature:390587-390719:1:exon
so has part: feature:399200-399313:1:exon
so has part: feature:399880-399924:1:exon
so has part: feature:404746-404847:1:exon
so has part: feature:422433-422602:1:exon
so has part: feature:429166-429313:1:exon
so has part: feature:432667-432756:1:exon
so has part: feature:436195-436300:1:exon
so has part: feature:437971-438129:1:exon
so has part: feature:440049-440175:1:exon
so has part: feature:443098-443189:1:exon
so has part: feature:444595-444657:1:exon
so has part: feature:446531-446680:1:exon
so has part: feature:448414-448456:1:exon

XP_030315658.1
type: Protein
SIO_000068: ncbiprotein

position:361812:1
position: 361812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448456:1
position: 448456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361812-361814:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390587-390719:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399200-399313:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399880-399924:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404746-404847:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422433-422602:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:429166-429313:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:432667-432756:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:436195-436300:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:437971-438129:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:440049-440175:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:443098-443189:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:444595-444657:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:446531-446680:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:448414-448456:1:exon

USP22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: USP22
product: ubiquitin specific peptidase 22, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030459800.1
SIO_010081: USP22
subclass of: SO_0000673
so part of: USP22
location: join(362067..362353,362876..362956,390587..390719,399200..399313,399880..399924,404746..404847,422433..422602,429166..429313,432667..432756,436195..436300,437971..438129,440049..440175,443098..443189,444595..444657,446531..446680,448414..449339)
location: region:362067-449339:1
so has part: feature:362067-362353:1:exon
so has part: feature:362876-362956:1:exon
so has part: feature:390587-390719:1:exon
so has part: feature:399200-399313:1:exon
so has part: feature:399880-399924:1:exon
so has part: feature:404746-404847:1:exon
so has part: feature:422433-422602:1:exon
so has part: feature:429166-429313:1:exon
so has part: feature:432667-432756:1:exon
so has part: feature:436195-436300:1:exon
so has part: feature:437971-438129:1:exon
so has part: feature:440049-440175:1:exon
so has part: feature:443098-443189:1:exon
so has part: feature:444595-444657:1:exon
so has part: feature:446531-446680:1:exon
so has part: feature:448414-449339:1:exon

position:362067:1
position: 362067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362067-362353:1:exon

position:362353:1
position: 362353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:362876-362956:1:exon

position:362876:1
position: 362876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362956:1
position: 362956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:390587-390719:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399200-399313:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:399880-399924:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:404746-404847:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:422433-422602:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:429166-429313:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:432667-432756:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:436195-436300:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:437971-438129:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:440049-440175:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:443098-443189:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:444595-444657:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:446531-446680:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:448414-449339:1:exon

USP22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: USP22
product: ubiquitin specific peptidase 22, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030459805.1
SIO_010081: USP22
subclass of: SO_0000673
so part of: USP22
location: join(362337..362353,390587..390719,399200..399313,399880..399924,404746..404847,422433..422602,429166..429313,432667..432756,436195..436300,437971..438129,440049..440175,443098..443189,444595..444657,446531..446680,448414..449339)
location: region:362337-449339:1
so has part: feature:362337-362353:1:exon
so has part: feature:390587-390719:1:exon
so has part: feature:399200-399313:1:exon
so has part: feature:399880-399924:1:exon
so has part: feature:404746-404847:1:exon
so has part: feature:422433-422602:1:exon
so has part: feature:429166-429313:1:exon
so has part: feature:432667-432756:1:exon
so has part: feature:436195-436300:1:exon
so has part: feature:437971-438129:1:exon
so has part: feature:440049-440175:1:exon
so has part: feature:443098-443189:1:exon
so has part: feature:444595-444657:1:exon
so has part: feature:446531-446680:1:exon
so has part: feature:448414-449339:1:exon

position:362337:1
position: 362337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362337-362353:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390587-390719:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399200-399313:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399880-399924:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404746-404847:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422433-422602:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:429166-429313:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:432667-432756:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:436195-436300:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:437971-438129:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:440049-440175:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:443098-443189:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:444595-444657:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:446531-446680:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:448414-449339:1:exon

USP22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: USP22
product: ubiquitin specific peptidase 22, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 ESTs, 2 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030459796.1
SIO_010081: USP22
subclass of: SO_0000673
so part of: USP22
location: join(362765..362956,390587..390719,399200..399313,399880..399924,404746..404847,422433..422602,429166..429313,436195..436300,437971..438129,440049..440175,443098..443189,444595..444657,446531..446680,448414..448894)
location: region:362765-448894:1
so has part: feature:362765-362956:1:exon
so has part: feature:390587-390719:1:exon
so has part: feature:399200-399313:1:exon
so has part: feature:399880-399924:1:exon
so has part: feature:404746-404847:1:exon
so has part: feature:422433-422602:1:exon
so has part: feature:429166-429313:1:exon
so has part: feature:436195-436300:1:exon
so has part: feature:437971-438129:1:exon
so has part: feature:440049-440175:1:exon
so has part: feature:443098-443189:1:exon
so has part: feature:444595-444657:1:exon
so has part: feature:446531-446680:1:exon
so has part: feature:448414-448894:1:exon

position:362765:1
position: 362765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448894:1
position: 448894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362765-362956:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390587-390719:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399200-399313:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399880-399924:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404746-404847:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422433-422602:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:429166-429313:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:436195-436300:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:437971-438129:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:440049-440175:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443098-443189:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:444595-444657:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:446531-446680:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:448414-448894:1:exon

USP22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: USP22
product: ubiquitin specific peptidase 22, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030459793.1
SIO_010081: USP22
subclass of: SO_0000673
so part of: USP22
location: join(362767..362956,390587..390719,399200..399313,399880..399924,404746..404847,422433..422602,429166..429313,432667..432756,436195..436300,437971..438129,440049..440175,443098..443189,444595..444657,446531..446680,448414..449339)
location: region:362767-449339:1
so has part: feature:362767-362956:1:exon
so has part: feature:390587-390719:1:exon
so has part: feature:399200-399313:1:exon
so has part: feature:399880-399924:1:exon
so has part: feature:404746-404847:1:exon
so has part: feature:422433-422602:1:exon
so has part: feature:429166-429313:1:exon
so has part: feature:432667-432756:1:exon
so has part: feature:436195-436300:1:exon
so has part: feature:437971-438129:1:exon
so has part: feature:440049-440175:1:exon
so has part: feature:443098-443189:1:exon
so has part: feature:444595-444657:1:exon
so has part: feature:446531-446680:1:exon
so has part: feature:448414-449339:1:exon

position:362767:1
position: 362767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362767-362956:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390587-390719:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399200-399313:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399880-399924:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404746-404847:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422433-422602:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:429166-429313:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:432667-432756:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:436195-436300:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:437971-438129:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:440049-440175:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:443098-443189:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:444595-444657:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:446531-446680:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:448414-449339:1:exon

USP22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: USP22
product: ubiquitin specific peptidase 22, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030459795.1
SIO_010081: USP22
subclass of: SO_0000673
so part of: USP22
location: join(362767..362956,390587..390719,399200..399313,399880..399924,404746..404847,422433..422602,429166..429313,432667..432756,436195..436300,437971..438129,440049..440175,443098..443189,446531..446680,448414..449339)
location: region:362767-449339:1
so has part: feature:362767-362956:1:exon
so has part: feature:390587-390719:1:exon
so has part: feature:399200-399313:1:exon
so has part: feature:399880-399924:1:exon
so has part: feature:404746-404847:1:exon
so has part: feature:422433-422602:1:exon
so has part: feature:429166-429313:1:exon
so has part: feature:432667-432756:1:exon
so has part: feature:436195-436300:1:exon
so has part: feature:437971-438129:1:exon
so has part: feature:440049-440175:1:exon
so has part: feature:443098-443189:1:exon
so has part: feature:446531-446680:1:exon
so has part: feature:448414-449339:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:362767-362956:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390587-390719:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399200-399313:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399880-399924:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404746-404847:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422433-422602:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:429166-429313:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:432667-432756:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:436195-436300:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:437971-438129:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:440049-440175:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:443098-443189:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:446531-446680:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:448414-449339:1:exon

USP22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: USP22
product: ubiquitin specific peptidase 22, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030459807.1
SIO_010081: USP22
subclass of: SO_0000673
so part of: USP22
location: join(362767..362956,390587..390719,399200..399313,399880..399924,404746..404847,422433..422602,429166..429313,432667..432756,436195..436300,437971..438129,440049..440175,443098..443189,448414..449339)
location: region:362767-449339:1
so has part: feature:362767-362956:1:exon
so has part: feature:390587-390719:1:exon
so has part: feature:399200-399313:1:exon
so has part: feature:399880-399924:1:exon
so has part: feature:404746-404847:1:exon
so has part: feature:422433-422602:1:exon
so has part: feature:429166-429313:1:exon
so has part: feature:432667-432756:1:exon
so has part: feature:436195-436300:1:exon
so has part: feature:437971-438129:1:exon
so has part: feature:440049-440175:1:exon
so has part: feature:443098-443189:1:exon
so has part: feature:448414-449339:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:362767-362956:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390587-390719:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399200-399313:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399880-399924:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404746-404847:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422433-422602:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:429166-429313:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:432667-432756:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:436195-436300:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:437971-438129:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:440049-440175:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:443098-443189:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:448414-449339:1:exon

USP22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: USP22
product: ubiquitin specific peptidase 22, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030459794.1
SIO_010081: USP22
subclass of: SO_0000673
so part of: USP22
location: join(362767..362956,390587..390719,399200..399313,404746..404847,422433..422602,429166..429313,432667..432756,436195..436300,437971..438129,440049..440175,443098..443189,444595..444657,446531..446680,448414..449339)
location: region:362767-449339:1
so has part: feature:362767-362956:1:exon
so has part: feature:390587-390719:1:exon
so has part: feature:399200-399313:1:exon
so has part: feature:404746-404847:1:exon
so has part: feature:422433-422602:1:exon
so has part: feature:429166-429313:1:exon
so has part: feature:432667-432756:1:exon
so has part: feature:436195-436300:1:exon
so has part: feature:437971-438129:1:exon
so has part: feature:440049-440175:1:exon
so has part: feature:443098-443189:1:exon
so has part: feature:444595-444657:1:exon
so has part: feature:446531-446680:1:exon
so has part: feature:448414-449339:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:362767-362956:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390587-390719:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399200-399313:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:404746-404847:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:422433-422602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:429166-429313:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:432667-432756:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:436195-436300:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:437971-438129:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:440049-440175:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443098-443189:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:444595-444657:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:446531-446680:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:448414-449339:1:exon

USP22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: USP22
product: ubiquitin specific peptidase 22, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 ESTs, 1 long SRA read, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030459799.1
SIO_010081: USP22
subclass of: SO_0000673
so part of: USP22
location: join(362767..362956,390587..390719,399200..399313,404746..404847,422433..422602,429166..429313,436195..436300,437971..438129,440049..440175,443098..443189,444595..444657,446531..446680,448414..448894)
location: region:362767-448894:1
so has part: feature:362767-362956:1:exon
so has part: feature:390587-390719:1:exon
so has part: feature:399200-399313:1:exon
so has part: feature:404746-404847:1:exon
so has part: feature:422433-422602:1:exon
so has part: feature:429166-429313:1:exon
so has part: feature:436195-436300:1:exon
so has part: feature:437971-438129:1:exon
so has part: feature:440049-440175:1:exon
so has part: feature:443098-443189:1:exon
so has part: feature:444595-444657:1:exon
so has part: feature:446531-446680:1:exon
so has part: feature:448414-448894:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:362767-362956:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390587-390719:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399200-399313:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:404746-404847:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:422433-422602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:429166-429313:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:436195-436300:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:437971-438129:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:440049-440175:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:443098-443189:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:444595-444657:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:446531-446680:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:448414-448894:1:exon

USP22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: USP22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 22 isoform X1
translation: MSPPAAGCCHVTGFKVENWKQNLRAIYQCFVWSGSAETRKRKAKSCICHMCGAHLNRLHSCLYCVFFGCFTKKHIHEHAKTKRHNLAIDLLYGGIYCFMCQDYIYDKDMEQIAKEEQRKAWKLQAFTPTVVSHYQCTMTGIGEKYSTWEPTKRELELLRHNPKRRKITTNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPSSCLVCEMSTLFQEFYSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKDSSIKNKCKAYLSLRVRSFRSSRALHFLEKCDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDGSVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEYE
SIO_010081: USP22
subclass of: SO_0000673
so part of: USP22
location: join(362831..362956,390587..390719,399200..399313,399880..399924,404746..404847,422433..422602,429166..429313,432667..432756,436195..436300,437971..438129,440049..440175,443098..443189,444595..444657,446531..446680,448414..448456)
location: region:362831-448456:1
so has part: feature:362831-362956:1:exon
so has part: feature:390587-390719:1:exon
so has part: feature:399200-399313:1:exon
so has part: feature:399880-399924:1:exon
so has part: feature:404746-404847:1:exon
so has part: feature:422433-422602:1:exon
so has part: feature:429166-429313:1:exon
so has part: feature:432667-432756:1:exon
so has part: feature:436195-436300:1:exon
so has part: feature:437971-438129:1:exon
so has part: feature:440049-440175:1:exon
so has part: feature:443098-443189:1:exon
so has part: feature:444595-444657:1:exon
so has part: feature:446531-446680:1:exon
so has part: feature:448414-448456:1:exon

XP_030315653.1
type: Protein
SIO_000068: ncbiprotein

position:362831:1
position: 362831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362831-362956:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390587-390719:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399200-399313:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399880-399924:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404746-404847:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422433-422602:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:429166-429313:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:432667-432756:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:436195-436300:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:437971-438129:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:440049-440175:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:443098-443189:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:444595-444657:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:446531-446680:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:448414-448456:1:exon

USP22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: USP22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 22 isoform X3
translation: MSPPAAGCCHVTGFKVENWKQNLRAIYQCFVWSGSAETRKRKAKSCICHMCGAHLNRLHSCLYCVFFGCFTKKHIHEHAKTKRHNLAIDLLYGGIYCFMCQDYIYDKDMEQIAKEEQRKAWKLQAFTPTVVSHYQCTMTGIGEKYSTWEPTKRELELLRHNPKRRKITTNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPSSCLVCEMSTLFQEFYSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKDSSIKNKCKAYLSLRVRSFRSSRALHFLEKCDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDGSVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTPFMASRYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEYE
SIO_010081: USP22
subclass of: SO_0000673
so part of: USP22
location: join(362831..362956,390587..390719,399200..399313,399880..399924,404746..404847,422433..422602,429166..429313,432667..432756,436195..436300,437971..438129,440049..440175,443098..443189,446531..446680,448414..448456)
location: region:362831-448456:1
so has part: feature:362831-362956:1:exon
so has part: feature:390587-390719:1:exon
so has part: feature:399200-399313:1:exon
so has part: feature:399880-399924:1:exon
so has part: feature:404746-404847:1:exon
so has part: feature:422433-422602:1:exon
so has part: feature:429166-429313:1:exon
so has part: feature:432667-432756:1:exon
so has part: feature:436195-436300:1:exon
so has part: feature:437971-438129:1:exon
so has part: feature:440049-440175:1:exon
so has part: feature:443098-443189:1:exon
so has part: feature:446531-446680:1:exon
so has part: feature:448414-448456:1:exon

XP_030315655.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:362831-362956:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390587-390719:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399200-399313:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399880-399924:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404746-404847:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422433-422602:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:429166-429313:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:432667-432756:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:436195-436300:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:437971-438129:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:440049-440175:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:443098-443189:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:446531-446680:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:448414-448456:1:exon

USP22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: USP22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 22 isoform X9
translation: MSPPAAGCCHVTGFKVENWKQNLRAIYQCFVWSGSAETRKRKAKSCICHMCGAHLNRLHSCLYCVFFGCFTKKHIHEHAKTKRHNLAIDLLYGGIYCFMCQDYIYDKDMEQIAKEEQRKAWKLQAFTPTVVSHYQCTMTGIGEKYSTWEPTKRELELLRHNPKRRKITTNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPSSCLVCEMSTLFQEFYSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKDSSIKNKCKAYLSLRVRSFRSSRALHFLEKCDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDGSVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTPFMASRYLLFYHKQFLEYE
SIO_010081: USP22
subclass of: SO_0000673
so part of: USP22
location: join(362831..362956,390587..390719,399200..399313,399880..399924,404746..404847,422433..422602,429166..429313,432667..432756,436195..436300,437971..438129,440049..440175,443098..443189,448414..448456)
location: region:362831-448456:1
so has part: feature:362831-362956:1:exon
so has part: feature:390587-390719:1:exon
so has part: feature:399200-399313:1:exon
so has part: feature:399880-399924:1:exon
so has part: feature:404746-404847:1:exon
so has part: feature:422433-422602:1:exon
so has part: feature:429166-429313:1:exon
so has part: feature:432667-432756:1:exon
so has part: feature:436195-436300:1:exon
so has part: feature:437971-438129:1:exon
so has part: feature:440049-440175:1:exon
so has part: feature:443098-443189:1:exon
so has part: feature:448414-448456:1:exon

XP_030315667.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:362831-362956:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390587-390719:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399200-399313:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399880-399924:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404746-404847:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422433-422602:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:429166-429313:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:432667-432756:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:436195-436300:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:437971-438129:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:440049-440175:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:443098-443189:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:448414-448456:1:exon

USP22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: USP22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 22 isoform X4
translation: MSPPAAGCCHVTGFKVENWKQNLRAIYQCFVWSGSAETRKRKAKSCICHMCGAHLNRLHSCLYCVFFGCFTKKHIHEHAKTKRHNLAIDLLYGGIYCFMCQDYIYDKDMEQIAKEEQRKAWKLQAFTPTVVSHYQCTMTGIGEKYSTWEPTKRELELLRHNPKRRKITTNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPSSCLVCEMSTLFQEFYSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDGSVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEYE
SIO_010081: USP22
subclass of: SO_0000673
so part of: USP22
location: join(362831..362956,390587..390719,399200..399313,399880..399924,404746..404847,422433..422602,429166..429313,436195..436300,437971..438129,440049..440175,443098..443189,444595..444657,446531..446680,448414..448456)
location: region:362831-448456:1
so has part: feature:362831-362956:1:exon
so has part: feature:390587-390719:1:exon
so has part: feature:399200-399313:1:exon
so has part: feature:399880-399924:1:exon
so has part: feature:404746-404847:1:exon
so has part: feature:422433-422602:1:exon
so has part: feature:429166-429313:1:exon
so has part: feature:436195-436300:1:exon
so has part: feature:437971-438129:1:exon
so has part: feature:440049-440175:1:exon
so has part: feature:443098-443189:1:exon
so has part: feature:444595-444657:1:exon
so has part: feature:446531-446680:1:exon
so has part: feature:448414-448456:1:exon

XP_030315656.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:362831-362956:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390587-390719:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399200-399313:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399880-399924:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404746-404847:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422433-422602:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:429166-429313:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:436195-436300:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:437971-438129:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:440049-440175:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443098-443189:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:444595-444657:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:446531-446680:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:448414-448456:1:exon

USP22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: USP22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 22 isoform X2
translation: MSPPAAGCCHVTGFKVENWKQNLRAIYQCFVWSGSAETRKRKAKSCICHMCGAHLNRLHSCLYCVFFGCFTKKHIHEHAKTKRHNLAIDLLYGGIYCFMCQDYIYDKDMEQIAKEEQRKAWKLQGIGEKYSTWEPTKRELELLRHNPKRRKITTNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPSSCLVCEMSTLFQEFYSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKDSSIKNKCKAYLSLRVRSFRSSRALHFLEKCDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDGSVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEYE
SIO_010081: USP22
subclass of: SO_0000673
so part of: USP22
location: join(362831..362956,390587..390719,399200..399313,404746..404847,422433..422602,429166..429313,432667..432756,436195..436300,437971..438129,440049..440175,443098..443189,444595..444657,446531..446680,448414..448456)
location: region:362831-448456:1
so has part: feature:362831-362956:1:exon
so has part: feature:390587-390719:1:exon
so has part: feature:399200-399313:1:exon
so has part: feature:404746-404847:1:exon
so has part: feature:422433-422602:1:exon
so has part: feature:429166-429313:1:exon
so has part: feature:432667-432756:1:exon
so has part: feature:436195-436300:1:exon
so has part: feature:437971-438129:1:exon
so has part: feature:440049-440175:1:exon
so has part: feature:443098-443189:1:exon
so has part: feature:444595-444657:1:exon
so has part: feature:446531-446680:1:exon
so has part: feature:448414-448456:1:exon

XP_030315654.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:362831-362956:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390587-390719:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399200-399313:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:404746-404847:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:422433-422602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:429166-429313:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:432667-432756:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:436195-436300:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:437971-438129:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:440049-440175:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443098-443189:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:444595-444657:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:446531-446680:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:448414-448456:1:exon

USP22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: USP22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 22 isoform X7
translation: MSPPAAGCCHVTGFKVENWKQNLRAIYQCFVWSGSAETRKRKAKSCICHMCGAHLNRLHSCLYCVFFGCFTKKHIHEHAKTKRHNLAIDLLYGGIYCFMCQDYIYDKDMEQIAKEEQRKAWKLQGIGEKYSTWEPTKRELELLRHNPKRRKITTNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPSSCLVCEMSTLFQEFYSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDGSVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEYE
SIO_010081: USP22
subclass of: SO_0000673
so part of: USP22
location: join(362831..362956,390587..390719,399200..399313,404746..404847,422433..422602,429166..429313,436195..436300,437971..438129,440049..440175,443098..443189,444595..444657,446531..446680,448414..448456)
location: region:362831-448456:1
so has part: feature:362831-362956:1:exon
so has part: feature:390587-390719:1:exon
so has part: feature:399200-399313:1:exon
so has part: feature:404746-404847:1:exon
so has part: feature:422433-422602:1:exon
so has part: feature:429166-429313:1:exon
so has part: feature:436195-436300:1:exon
so has part: feature:437971-438129:1:exon
so has part: feature:440049-440175:1:exon
so has part: feature:443098-443189:1:exon
so has part: feature:444595-444657:1:exon
so has part: feature:446531-446680:1:exon
so has part: feature:448414-448456:1:exon

XP_030315659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:362831-362956:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390587-390719:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399200-399313:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:404746-404847:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:422433-422602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:429166-429313:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:436195-436300:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:437971-438129:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:440049-440175:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:443098-443189:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:444595-444657:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:446531-446680:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:448414-448456:1:exon

USP22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: USP22
product: ubiquitin specific peptidase 22, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030459803.1
SIO_010081: USP22
subclass of: SO_0000673
so part of: USP22
location: join(363132..363184,390587..390719,399200..399313,399880..399924,404746..404847,422433..422602,429166..429313,432667..432756,436195..436300,437971..438129,440049..440175,443098..443189,444595..444657,446531..446680,448414..449339)
location: region:363132-449339:1
so has part: feature:363132-363184:1:exon
so has part: feature:390587-390719:1:exon
so has part: feature:399200-399313:1:exon
so has part: feature:399880-399924:1:exon
so has part: feature:404746-404847:1:exon
so has part: feature:422433-422602:1:exon
so has part: feature:429166-429313:1:exon
so has part: feature:432667-432756:1:exon
so has part: feature:436195-436300:1:exon
so has part: feature:437971-438129:1:exon
so has part: feature:440049-440175:1:exon
so has part: feature:443098-443189:1:exon
so has part: feature:444595-444657:1:exon
so has part: feature:446531-446680:1:exon
so has part: feature:448414-449339:1:exon

position:363132:1
position: 363132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363132-363184:1:exon

position:363184:1
position: 363184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:390587-390719:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399200-399313:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399880-399924:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404746-404847:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422433-422602:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:429166-429313:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:432667-432756:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:436195-436300:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:437971-438129:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:440049-440175:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:443098-443189:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:444595-444657:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:446531-446680:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:448414-449339:1:exon

USP22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: USP22
product: ubiquitin specific peptidase 22, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030459806.1
SIO_010081: USP22
subclass of: SO_0000673
so part of: USP22
location: join(363473..363489,390587..390719,399200..399313,399880..399924,404746..404847,422433..422602,429166..429313,432667..432756,436195..436300,437971..438129,440049..440175,443098..443189,444595..444657,446531..446680,448414..449339)
location: region:363473-449339:1
so has part: feature:363473-363489:1:exon
so has part: feature:390587-390719:1:exon
so has part: feature:399200-399313:1:exon
so has part: feature:399880-399924:1:exon
so has part: feature:404746-404847:1:exon
so has part: feature:422433-422602:1:exon
so has part: feature:429166-429313:1:exon
so has part: feature:432667-432756:1:exon
so has part: feature:436195-436300:1:exon
so has part: feature:437971-438129:1:exon
so has part: feature:440049-440175:1:exon
so has part: feature:443098-443189:1:exon
so has part: feature:444595-444657:1:exon
so has part: feature:446531-446680:1:exon
so has part: feature:448414-449339:1:exon

position:363473:1
position: 363473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363473-363489:1:exon

position:363489:1
position: 363489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:390587-390719:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399200-399313:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399880-399924:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404746-404847:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422433-422602:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:429166-429313:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:432667-432756:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:436195-436300:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:437971-438129:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:440049-440175:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:443098-443189:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:444595-444657:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:446531-446680:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:448414-449339:1:exon

USP22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: USP22
product: ubiquitin specific peptidase 22, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030459802.1
SIO_010081: USP22
subclass of: SO_0000673
so part of: USP22
location: join(363644..363700,390587..390719,399200..399313,399880..399924,404746..404847,422433..422602,429166..429313,432667..432756,436195..436300,437971..438129,440049..440175,443098..443189,444595..444657,446531..446680,448414..449339)
location: region:363644-449339:1
so has part: feature:363644-363700:1:exon
so has part: feature:390587-390719:1:exon
so has part: feature:399200-399313:1:exon
so has part: feature:399880-399924:1:exon
so has part: feature:404746-404847:1:exon
so has part: feature:422433-422602:1:exon
so has part: feature:429166-429313:1:exon
so has part: feature:432667-432756:1:exon
so has part: feature:436195-436300:1:exon
so has part: feature:437971-438129:1:exon
so has part: feature:440049-440175:1:exon
so has part: feature:443098-443189:1:exon
so has part: feature:444595-444657:1:exon
so has part: feature:446531-446680:1:exon
so has part: feature:448414-449339:1:exon

position:363644:1
position: 363644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363644-363700:1:exon

position:363700:1
position: 363700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:390587-390719:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399200-399313:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399880-399924:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404746-404847:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422433-422602:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:429166-429313:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:432667-432756:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:436195-436300:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:437971-438129:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:440049-440175:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:443098-443189:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:444595-444657:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:446531-446680:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:448414-449339:1:exon

USP22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: USP22
product: ubiquitin specific peptidase 22, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030459797.1
SIO_010081: USP22
subclass of: SO_0000673
so part of: USP22
location: join(364297..364352,390587..390719,399200..399313,399880..399924,404746..404847,422433..422602,429166..429313,432667..432756,436195..436300,437971..438129,440049..440175,443098..443189,444595..444657,446531..446680,448414..449339)
location: region:364297-449339:1
so has part: feature:364297-364352:1:exon
so has part: feature:390587-390719:1:exon
so has part: feature:399200-399313:1:exon
so has part: feature:399880-399924:1:exon
so has part: feature:404746-404847:1:exon
so has part: feature:422433-422602:1:exon
so has part: feature:429166-429313:1:exon
so has part: feature:432667-432756:1:exon
so has part: feature:436195-436300:1:exon
so has part: feature:437971-438129:1:exon
so has part: feature:440049-440175:1:exon
so has part: feature:443098-443189:1:exon
so has part: feature:444595-444657:1:exon
so has part: feature:446531-446680:1:exon
so has part: feature:448414-449339:1:exon

position:364297:1
position: 364297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364297-364352:1:exon

position:364352:1
position: 364352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:390587-390719:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399200-399313:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399880-399924:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404746-404847:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422433-422602:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:429166-429313:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:432667-432756:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:436195-436300:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:437971-438129:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:440049-440175:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:443098-443189:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:444595-444657:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:446531-446680:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:448414-449339:1:exon

USP22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: USP22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 22 isoform X5
translation: MRDAKSCICHMCGAHLNRLHSCLYCVFFGCFTKKHIHEHAKTKRHNLAIDLLYGGIYCFMCQDYIYDKDMEQIAKEEQRKAWKLQAFTPTVVSHYQCTMTGIGEKYSTWEPTKRELELLRHNPKRRKITTNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPSSCLVCEMSTLFQEFYSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKDSSIKNKCKAYLSLRVRSFRSSRALHFLEKCDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDGSVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEYE
SIO_010081: USP22
subclass of: SO_0000673
so part of: USP22
location: join(364344..364352,390587..390719,399200..399313,399880..399924,404746..404847,422433..422602,429166..429313,432667..432756,436195..436300,437971..438129,440049..440175,443098..443189,444595..444657,446531..446680,448414..448456)
location: region:364344-448456:1
so has part: feature:364344-364352:1:exon
so has part: feature:390587-390719:1:exon
so has part: feature:399200-399313:1:exon
so has part: feature:399880-399924:1:exon
so has part: feature:404746-404847:1:exon
so has part: feature:422433-422602:1:exon
so has part: feature:429166-429313:1:exon
so has part: feature:432667-432756:1:exon
so has part: feature:436195-436300:1:exon
so has part: feature:437971-438129:1:exon
so has part: feature:440049-440175:1:exon
so has part: feature:443098-443189:1:exon
so has part: feature:444595-444657:1:exon
so has part: feature:446531-446680:1:exon
so has part: feature:448414-448456:1:exon

XP_030315657.1
type: Protein
SIO_000068: ncbiprotein

position:364344:1
position: 364344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364344-364352:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390587-390719:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399200-399313:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399880-399924:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404746-404847:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422433-422602:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:429166-429313:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:432667-432756:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:436195-436300:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:437971-438129:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:440049-440175:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:443098-443189:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:444595-444657:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:446531-446680:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:448414-448456:1:exon

USP22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: USP22
product: ubiquitin specific peptidase 22, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030459804.1
SIO_010081: USP22
subclass of: SO_0000673
so part of: USP22
location: join(389897..389915,390587..390719,399200..399313,399880..399924,404746..404847,422433..422602,429166..429313,432667..432756,436195..436300,437971..438129,440049..440175,443098..443189,444595..444657,446531..446680,448414..449339)
location: region:389897-449339:1
so has part: feature:389897-389915:1:exon
so has part: feature:390587-390719:1:exon
so has part: feature:399200-399313:1:exon
so has part: feature:399880-399924:1:exon
so has part: feature:404746-404847:1:exon
so has part: feature:422433-422602:1:exon
so has part: feature:429166-429313:1:exon
so has part: feature:432667-432756:1:exon
so has part: feature:436195-436300:1:exon
so has part: feature:437971-438129:1:exon
so has part: feature:440049-440175:1:exon
so has part: feature:443098-443189:1:exon
so has part: feature:444595-444657:1:exon
so has part: feature:446531-446680:1:exon
so has part: feature:448414-449339:1:exon

position:389897:1
position: 389897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389897-389915:1:exon

position:389915:1
position: 389915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:390587-390719:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399200-399313:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399880-399924:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404746-404847:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422433-422602:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:429166-429313:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:432667-432756:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:436195-436300:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:437971-438129:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:440049-440175:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:443098-443189:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:444595-444657:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:446531-446680:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:448414-449339:1:exon

USP22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: USP22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 22 isoform X8
translation: MCGAHLNRLHSCLYCVFFGCFTKKHIHEHAKTKRHNLAIDLLYGGIYCFMCQDYIYDKDMEQIAKEEQRKAWKLQAFTPTVVSHYQCTMTGIGEKYSTWEPTKRELELLRHNPKRRKITTNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPSSCLVCEMSTLFQEFYSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKDSSIKNKCKAYLSLRVRSFRSSRALHFLEKCDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDGSVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEYE
SIO_010081: USP22
subclass of: SO_0000673
so part of: USP22
location: join(390608..390719,399200..399313,399880..399924,404746..404847,422433..422602,429166..429313,432667..432756,436195..436300,437971..438129,440049..440175,443098..443189,444595..444657,446531..446680,448414..448456)
location: region:390608-448456:1
so has part: feature:390608-390719:1:exon
so has part: feature:399200-399313:1:exon
so has part: feature:399880-399924:1:exon
so has part: feature:404746-404847:1:exon
so has part: feature:422433-422602:1:exon
so has part: feature:429166-429313:1:exon
so has part: feature:432667-432756:1:exon
so has part: feature:436195-436300:1:exon
so has part: feature:437971-438129:1:exon
so has part: feature:440049-440175:1:exon
so has part: feature:443098-443189:1:exon
so has part: feature:444595-444657:1:exon
so has part: feature:446531-446680:1:exon
so has part: feature:448414-448456:1:exon

XP_030315660.1
type: Protein
SIO_000068: ncbiprotein

position:390608:1
position: 390608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390608-390719:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:399200-399313:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399880-399924:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:404746-404847:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:422433-422602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:429166-429313:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:432667-432756:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:436195-436300:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:437971-438129:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:440049-440175:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443098-443189:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:444595-444657:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:446531-446680:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:448414-448456:1:exon

USP22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: USP22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 22 isoform X8
translation: MCGAHLNRLHSCLYCVFFGCFTKKHIHEHAKTKRHNLAIDLLYGGIYCFMCQDYIYDKDMEQIAKEEQRKAWKLQAFTPTVVSHYQCTMTGIGEKYSTWEPTKRELELLRHNPKRRKITTNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPSSCLVCEMSTLFQEFYSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKDSSIKNKCKAYLSLRVRSFRSSRALHFLEKCDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDGSVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEYE
SIO_010081: USP22
subclass of: SO_0000673
so part of: USP22
location: join(390608..390719,399200..399313,399880..399924,404746..404847,422433..422602,429166..429313,432667..432756,436195..436300,437971..438129,440049..440175,443098..443189,444595..444657,446531..446680,448414..448456)
location: region:390608-448456:1
so has part: feature:390608-390719:1:exon
so has part: feature:399200-399313:1:exon
so has part: feature:399880-399924:1:exon
so has part: feature:404746-404847:1:exon
so has part: feature:422433-422602:1:exon
so has part: feature:429166-429313:1:exon
so has part: feature:432667-432756:1:exon
so has part: feature:436195-436300:1:exon
so has part: feature:437971-438129:1:exon
so has part: feature:440049-440175:1:exon
so has part: feature:443098-443189:1:exon
so has part: feature:444595-444657:1:exon
so has part: feature:446531-446680:1:exon
so has part: feature:448414-448456:1:exon

XP_030315662.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390608-390719:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:399200-399313:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399880-399924:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:404746-404847:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:422433-422602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:429166-429313:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:432667-432756:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:436195-436300:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:437971-438129:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:440049-440175:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443098-443189:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:444595-444657:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:446531-446680:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:448414-448456:1:exon

USP22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: USP22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 22 isoform X8
translation: MCGAHLNRLHSCLYCVFFGCFTKKHIHEHAKTKRHNLAIDLLYGGIYCFMCQDYIYDKDMEQIAKEEQRKAWKLQAFTPTVVSHYQCTMTGIGEKYSTWEPTKRELELLRHNPKRRKITTNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPSSCLVCEMSTLFQEFYSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKDSSIKNKCKAYLSLRVRSFRSSRALHFLEKCDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDGSVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEYE
SIO_010081: USP22
subclass of: SO_0000673
so part of: USP22
location: join(390608..390719,399200..399313,399880..399924,404746..404847,422433..422602,429166..429313,432667..432756,436195..436300,437971..438129,440049..440175,443098..443189,444595..444657,446531..446680,448414..448456)
location: region:390608-448456:1
so has part: feature:390608-390719:1:exon
so has part: feature:399200-399313:1:exon
so has part: feature:399880-399924:1:exon
so has part: feature:404746-404847:1:exon
so has part: feature:422433-422602:1:exon
so has part: feature:429166-429313:1:exon
so has part: feature:432667-432756:1:exon
so has part: feature:436195-436300:1:exon
so has part: feature:437971-438129:1:exon
so has part: feature:440049-440175:1:exon
so has part: feature:443098-443189:1:exon
so has part: feature:444595-444657:1:exon
so has part: feature:446531-446680:1:exon
so has part: feature:448414-448456:1:exon

XP_030315663.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390608-390719:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:399200-399313:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399880-399924:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:404746-404847:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:422433-422602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:429166-429313:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:432667-432756:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:436195-436300:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:437971-438129:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:440049-440175:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443098-443189:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:444595-444657:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:446531-446680:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:448414-448456:1:exon

USP22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: USP22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 22 isoform X8
translation: MCGAHLNRLHSCLYCVFFGCFTKKHIHEHAKTKRHNLAIDLLYGGIYCFMCQDYIYDKDMEQIAKEEQRKAWKLQAFTPTVVSHYQCTMTGIGEKYSTWEPTKRELELLRHNPKRRKITTNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPSSCLVCEMSTLFQEFYSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKDSSIKNKCKAYLSLRVRSFRSSRALHFLEKCDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDGSVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEYE
SIO_010081: USP22
subclass of: SO_0000673
so part of: USP22
location: join(390608..390719,399200..399313,399880..399924,404746..404847,422433..422602,429166..429313,432667..432756,436195..436300,437971..438129,440049..440175,443098..443189,444595..444657,446531..446680,448414..448456)
location: region:390608-448456:1
so has part: feature:390608-390719:1:exon
so has part: feature:399200-399313:1:exon
so has part: feature:399880-399924:1:exon
so has part: feature:404746-404847:1:exon
so has part: feature:422433-422602:1:exon
so has part: feature:429166-429313:1:exon
so has part: feature:432667-432756:1:exon
so has part: feature:436195-436300:1:exon
so has part: feature:437971-438129:1:exon
so has part: feature:440049-440175:1:exon
so has part: feature:443098-443189:1:exon
so has part: feature:444595-444657:1:exon
so has part: feature:446531-446680:1:exon
so has part: feature:448414-448456:1:exon

XP_030315664.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390608-390719:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:399200-399313:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399880-399924:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:404746-404847:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:422433-422602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:429166-429313:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:432667-432756:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:436195-436300:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:437971-438129:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:440049-440175:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443098-443189:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:444595-444657:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:446531-446680:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:448414-448456:1:exon

USP22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: USP22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 22 isoform X8
translation: MCGAHLNRLHSCLYCVFFGCFTKKHIHEHAKTKRHNLAIDLLYGGIYCFMCQDYIYDKDMEQIAKEEQRKAWKLQAFTPTVVSHYQCTMTGIGEKYSTWEPTKRELELLRHNPKRRKITTNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPSSCLVCEMSTLFQEFYSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKDSSIKNKCKAYLSLRVRSFRSSRALHFLEKCDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDGSVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEYE
SIO_010081: USP22
subclass of: SO_0000673
so part of: USP22
location: join(390608..390719,399200..399313,399880..399924,404746..404847,422433..422602,429166..429313,432667..432756,436195..436300,437971..438129,440049..440175,443098..443189,444595..444657,446531..446680,448414..448456)
location: region:390608-448456:1
so has part: feature:390608-390719:1:exon
so has part: feature:399200-399313:1:exon
so has part: feature:399880-399924:1:exon
so has part: feature:404746-404847:1:exon
so has part: feature:422433-422602:1:exon
so has part: feature:429166-429313:1:exon
so has part: feature:432667-432756:1:exon
so has part: feature:436195-436300:1:exon
so has part: feature:437971-438129:1:exon
so has part: feature:440049-440175:1:exon
so has part: feature:443098-443189:1:exon
so has part: feature:444595-444657:1:exon
so has part: feature:446531-446680:1:exon
so has part: feature:448414-448456:1:exon

XP_030315665.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390608-390719:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:399200-399313:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399880-399924:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:404746-404847:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:422433-422602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:429166-429313:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:432667-432756:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:436195-436300:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:437971-438129:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:440049-440175:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443098-443189:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:444595-444657:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:446531-446680:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:448414-448456:1:exon

USP22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: USP22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 22 isoform X8
translation: MCGAHLNRLHSCLYCVFFGCFTKKHIHEHAKTKRHNLAIDLLYGGIYCFMCQDYIYDKDMEQIAKEEQRKAWKLQAFTPTVVSHYQCTMTGIGEKYSTWEPTKRELELLRHNPKRRKITTNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPSSCLVCEMSTLFQEFYSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKDSSIKNKCKAYLSLRVRSFRSSRALHFLEKCDDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDGSVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQGTLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFYHKQFLEYE
SIO_010081: USP22
subclass of: SO_0000673
so part of: USP22
location: join(390608..390719,399200..399313,399880..399924,404746..404847,422433..422602,429166..429313,432667..432756,436195..436300,437971..438129,440049..440175,443098..443189,444595..444657,446531..446680,448414..448456)
location: region:390608-448456:1
so has part: feature:390608-390719:1:exon
so has part: feature:399200-399313:1:exon
so has part: feature:399880-399924:1:exon
so has part: feature:404746-404847:1:exon
so has part: feature:422433-422602:1:exon
so has part: feature:429166-429313:1:exon
so has part: feature:432667-432756:1:exon
so has part: feature:436195-436300:1:exon
so has part: feature:437971-438129:1:exon
so has part: feature:440049-440175:1:exon
so has part: feature:443098-443189:1:exon
so has part: feature:444595-444657:1:exon
so has part: feature:446531-446680:1:exon
so has part: feature:448414-448456:1:exon

XP_030315666.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390608-390719:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:399200-399313:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399880-399924:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:404746-404847:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:422433-422602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:429166-429313:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:432667-432756:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:436195-436300:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:437971-438129:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:440049-440175:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443098-443189:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:444595-444657:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:446531-446680:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:448414-448456:1:exon

TNFRSF13B
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: TNFRSF13B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(454308..457916)
location: region:454308-457916:-1
so has part: feature:454308-457916:-1:exon
subclass of: SO_0000010

103533101
type: Gene
SIO_000068: ncbigene

position:454308:-1
position: 454308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457916:-1
position: 457916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454308-457916:-1:exon

TNFRSF13B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TNFRSF13B
product: TNF receptor superfamily member 13B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030459984.1
SIO_010081: TNFRSF13B
subclass of: SO_0000673
so part of: TNFRSF13B
location: complement(join(454308..454884,455513..455731,456398..456514,457808..457916))
location: region:454308-457916:-1
so has part: feature:457808-457916:-1:exon
so has part: feature:456398-456514:-1:exon
so has part: feature:455513-455731:-1:exon
so has part: feature:454308-454884:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:457808-457916:-1:exon

position:457808:-1
position: 457808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:456398-456514:-1:exon

position:456398:-1
position: 456398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456514:-1
position: 456514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:455513-455731:-1:exon

position:455513:-1
position: 455513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455731:-1
position: 455731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:454308-454884:-1:exon

position:454884:-1
position: 454884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TNFRSF13B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TNFRSF13B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 13B
translation: MNNCTDQQYWDTLVCQCIPCSMVCGQPLARRCAELCESMDCNRREGFYYDELLKECIDCSTLCGQHPKQCAPSCEAGALGATPPVAVLEQKSCVELEPWLVVYLLLGLCLCALICSLLLGWTHLRRKGEVVSCQASTGTCHCREDSSKDRLVEAGSDADGSAGGRVPEPVETCGFCFPGHGSAVQETKSFHSSCCHPGERAAACHTRMCNTGSAGAIPSPDDGHFKIICSPSQEKTPMP
SIO_010081: TNFRSF13B
subclass of: SO_0000673
so part of: TNFRSF13B
location: complement(join(454610..454884,455513..455731,456398..456514,457808..457916))
location: region:454610-457916:-1
so has part: feature:457808-457916:-1:exon
so has part: feature:456398-456514:-1:exon
so has part: feature:455513-455731:-1:exon
so has part: feature:454610-454884:-1:exon

XP_030315844.1
type: Protein
SIO_000068: ncbiprotein

position:454610:-1
position: 454610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457808-457916:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:456398-456514:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:455513-455731:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:454610-454884:-1:exon

MPRIP
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: MPRIP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 469220..544808
location: region:469220-544808:1
so has part: feature:469220-544808:1:exon
subclass of: SO_0000010

103533069
type: Gene
SIO_000068: ncbigene

position:469220:1
position: 469220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544808:1
position: 544808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469220-544808:1:exon

MPRIP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MPRIP
product: myosin phosphatase Rho interacting protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 9 ESTs, 4 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030459965.1
SIO_010081: MPRIP
subclass of: SO_0000673
so part of: MPRIP
location: join(469220..469383,480219..480296,482292..482357,500760..500911,503396..503480,507643..507853,508849..509365,515110..515251,515759..515875,517883..517939,519291..519359,519617..519706,519974..520083,524238..524823,525752..525868,528887..532753,535665..535812,536459..536576,537431..537590,537683..537802,538303..538389,539048..539210,539654..539739,540902..540967,543612..544808)
location: region:469220-544808:1
so has part: feature:469220-469383:1:exon
so has part: feature:480219-480296:1:exon
so has part: feature:482292-482357:1:exon
so has part: feature:500760-500911:1:exon
so has part: feature:503396-503480:1:exon
so has part: feature:507643-507853:1:exon
so has part: feature:508849-509365:1:exon
so has part: feature:515110-515251:1:exon
so has part: feature:515759-515875:1:exon
so has part: feature:517883-517939:1:exon
so has part: feature:519291-519359:1:exon
so has part: feature:519617-519706:1:exon
so has part: feature:519974-520083:1:exon
so has part: feature:524238-524823:1:exon
so has part: feature:525752-525868:1:exon
so has part: feature:528887-532753:1:exon
so has part: feature:535665-535812:1:exon
so has part: feature:536459-536576:1:exon
so has part: feature:537431-537590:1:exon
so has part: feature:537683-537802:1:exon
so has part: feature:538303-538389:1:exon
so has part: feature:539048-539210:1:exon
so has part: feature:539654-539739:1:exon
so has part: feature:540902-540967:1:exon
so has part: feature:543612-544808:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:469220-469383:1:exon

position:469383:1
position: 469383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:480219-480296:1:exon

position:480219:1
position: 480219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480296:1
position: 480296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:482292-482357:1:exon

position:482292:1
position: 482292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:482357:1
position: 482357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:500760-500911:1:exon

position:500760:1
position: 500760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500911:1
position: 500911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:503396-503480:1:exon

position:503396:1
position: 503396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503480:1
position: 503480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:507643-507853:1:exon

position:507643:1
position: 507643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507853:1
position: 507853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:508849-509365:1:exon

position:508849:1
position: 508849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509365:1
position: 509365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:515110-515251:1:exon

position:515110:1
position: 515110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515251:1
position: 515251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:515759-515875:1:exon

position:515759:1
position: 515759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515875:1
position: 515875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:517883-517939:1:exon

position:517883:1
position: 517883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517939:1
position: 517939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:519291-519359:1:exon

position:519291:1
position: 519291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519359:1
position: 519359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:519617-519706:1:exon

position:519617:1
position: 519617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519706:1
position: 519706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:519974-520083:1:exon

position:519974:1
position: 519974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520083:1
position: 520083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:524238-524823:1:exon

position:524238:1
position: 524238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524823:1
position: 524823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:525752-525868:1:exon

position:525752:1
position: 525752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525868:1
position: 525868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:528887-532753:1:exon

position:528887:1
position: 528887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532753:1
position: 532753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:535665-535812:1:exon

position:535665:1
position: 535665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535812:1
position: 535812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:536459-536576:1:exon

position:536459:1
position: 536459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536576:1
position: 536576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:537431-537590:1:exon

position:537431:1
position: 537431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537590:1
position: 537590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:537683-537802:1:exon

position:537683:1
position: 537683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537802:1
position: 537802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:538303-538389:1:exon

position:538303:1
position: 538303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538389:1
position: 538389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:539048-539210:1:exon

position:539048:1
position: 539048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539210:1
position: 539210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:539654-539739:1:exon

position:539654:1
position: 539654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539739:1
position: 539739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:540902-540967:1:exon

position:540902:1
position: 540902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540967:1
position: 540967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:543612-544808:1:exon

position:543612:1
position: 543612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MPRIP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MPRIP
product: myosin phosphatase Rho interacting protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 11 ESTs, 9 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030459963.1
SIO_010081: MPRIP
subclass of: SO_0000673
so part of: MPRIP
location: join(469220..469383,480219..480296,482292..482357,500760..500911,503396..503480,507643..507853,508849..509365,515110..515251,515759..515875,517883..517939,519291..519359,519617..519706,519974..520083,524238..524823,525752..525868,528887..532753,535665..535812,536459..536576,537431..537590,537683..537802,538303..538389,539048..539210,539654..539739,540902..540963,543612..544808)
location: region:469220-544808:1
so has part: feature:469220-469383:1:exon
so has part: feature:480219-480296:1:exon
so has part: feature:482292-482357:1:exon
so has part: feature:500760-500911:1:exon
so has part: feature:503396-503480:1:exon
so has part: feature:507643-507853:1:exon
so has part: feature:508849-509365:1:exon
so has part: feature:515110-515251:1:exon
so has part: feature:515759-515875:1:exon
so has part: feature:517883-517939:1:exon
so has part: feature:519291-519359:1:exon
so has part: feature:519617-519706:1:exon
so has part: feature:519974-520083:1:exon
so has part: feature:524238-524823:1:exon
so has part: feature:525752-525868:1:exon
so has part: feature:528887-532753:1:exon
so has part: feature:535665-535812:1:exon
so has part: feature:536459-536576:1:exon
so has part: feature:537431-537590:1:exon
so has part: feature:537683-537802:1:exon
so has part: feature:538303-538389:1:exon
so has part: feature:539048-539210:1:exon
so has part: feature:539654-539739:1:exon
so has part: feature:540902-540963:1:exon
so has part: feature:543612-544808:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:469220-469383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:480219-480296:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:482292-482357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:500760-500911:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:503396-503480:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:507643-507853:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:508849-509365:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:515110-515251:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:515759-515875:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:517883-517939:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:519291-519359:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:519617-519706:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:519974-520083:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:524238-524823:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:525752-525868:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:528887-532753:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:535665-535812:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:536459-536576:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:537431-537590:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:537683-537802:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:538303-538389:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539048-539210:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:539654-539739:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:540902-540963:1:exon

position:540963:1
position: 540963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:543612-544808:1:exon

MPRIP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MPRIP
product: myosin phosphatase Rho interacting protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 10 ESTs, 2 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030459962.1
SIO_010081: MPRIP
subclass of: SO_0000673
so part of: MPRIP
location: join(469220..469383,480219..480296,482292..482357,500760..500911,503396..503480,507643..507853,508849..509365,515110..515251,515759..515875,517883..517939,519291..519359,519617..519706,519974..520083,524238..524823,525752..525868,528887..532753,535665..535812,536459..536576,537431..537590,537683..537802,538303..538389,539048..539210,539654..539739,543612..544808)
location: region:469220-544808:1
so has part: feature:469220-469383:1:exon
so has part: feature:480219-480296:1:exon
so has part: feature:482292-482357:1:exon
so has part: feature:500760-500911:1:exon
so has part: feature:503396-503480:1:exon
so has part: feature:507643-507853:1:exon
so has part: feature:508849-509365:1:exon
so has part: feature:515110-515251:1:exon
so has part: feature:515759-515875:1:exon
so has part: feature:517883-517939:1:exon
so has part: feature:519291-519359:1:exon
so has part: feature:519617-519706:1:exon
so has part: feature:519974-520083:1:exon
so has part: feature:524238-524823:1:exon
so has part: feature:525752-525868:1:exon
so has part: feature:528887-532753:1:exon
so has part: feature:535665-535812:1:exon
so has part: feature:536459-536576:1:exon
so has part: feature:537431-537590:1:exon
so has part: feature:537683-537802:1:exon
so has part: feature:538303-538389:1:exon
so has part: feature:539048-539210:1:exon
so has part: feature:539654-539739:1:exon
so has part: feature:543612-544808:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:469220-469383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:480219-480296:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:482292-482357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:500760-500911:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:503396-503480:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:507643-507853:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:508849-509365:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:515110-515251:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:515759-515875:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:517883-517939:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:519291-519359:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:519617-519706:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:519974-520083:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:524238-524823:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:525752-525868:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:528887-532753:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:535665-535812:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:536459-536576:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:537431-537590:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:537683-537802:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:538303-538389:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539048-539210:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:539654-539739:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:543612-544808:1:exon

MPRIP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MPRIP
product: myosin phosphatase Rho interacting protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 10 ESTs, 2 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030459966.1
SIO_010081: MPRIP
subclass of: SO_0000673
so part of: MPRIP
location: join(469220..469383,480219..480296,482292..482357,500760..500911,503396..503480,507643..507853,508849..509008,509129..509365,515110..515251,515759..515875,517883..517939,519291..519359,519617..519706,519974..520083,524238..524823,525752..525868,528887..532753,535665..535812,536459..536576,537431..537590,537683..537802,538303..538389,539048..539210,539654..539739,543612..544808)
location: region:469220-544808:1
so has part: feature:469220-469383:1:exon
so has part: feature:480219-480296:1:exon
so has part: feature:482292-482357:1:exon
so has part: feature:500760-500911:1:exon
so has part: feature:503396-503480:1:exon
so has part: feature:507643-507853:1:exon
so has part: feature:508849-509008:1:exon
so has part: feature:509129-509365:1:exon
so has part: feature:515110-515251:1:exon
so has part: feature:515759-515875:1:exon
so has part: feature:517883-517939:1:exon
so has part: feature:519291-519359:1:exon
so has part: feature:519617-519706:1:exon
so has part: feature:519974-520083:1:exon
so has part: feature:524238-524823:1:exon
so has part: feature:525752-525868:1:exon
so has part: feature:528887-532753:1:exon
so has part: feature:535665-535812:1:exon
so has part: feature:536459-536576:1:exon
so has part: feature:537431-537590:1:exon
so has part: feature:537683-537802:1:exon
so has part: feature:538303-538389:1:exon
so has part: feature:539048-539210:1:exon
so has part: feature:539654-539739:1:exon
so has part: feature:543612-544808:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:469220-469383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:480219-480296:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:482292-482357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:500760-500911:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:503396-503480:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:507643-507853:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:508849-509008:1:exon

position:509008:1
position: 509008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:509129-509365:1:exon

position:509129:1
position: 509129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:515110-515251:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:515759-515875:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:517883-517939:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:519291-519359:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:519617-519706:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:519974-520083:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:524238-524823:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:525752-525868:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:528887-532753:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:535665-535812:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:536459-536576:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:537431-537590:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:537683-537802:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:538303-538389:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:539048-539210:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:539654-539739:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:543612-544808:1:exon

MPRIP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MPRIP
product: myosin phosphatase Rho interacting protein, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 9 ESTs, 5 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030459968.1
SIO_010081: MPRIP
subclass of: SO_0000673
so part of: MPRIP
location: join(469220..469383,480219..480296,482292..482357,500760..500911,503396..503480,507643..507853,508849..509008,515110..515251,515759..515875,517883..517939,519291..519359,519617..519706,519974..520083,524238..524823,525752..525868,528887..532753,535665..535812,536459..536576,537431..537590,537683..537802,538303..538389,539048..539210,539654..539739,540902..540967,543612..544808)
location: region:469220-544808:1
so has part: feature:469220-469383:1:exon
so has part: feature:480219-480296:1:exon
so has part: feature:482292-482357:1:exon
so has part: feature:500760-500911:1:exon
so has part: feature:503396-503480:1:exon
so has part: feature:507643-507853:1:exon
so has part: feature:508849-509008:1:exon
so has part: feature:515110-515251:1:exon
so has part: feature:515759-515875:1:exon
so has part: feature:517883-517939:1:exon
so has part: feature:519291-519359:1:exon
so has part: feature:519617-519706:1:exon
so has part: feature:519974-520083:1:exon
so has part: feature:524238-524823:1:exon
so has part: feature:525752-525868:1:exon
so has part: feature:528887-532753:1:exon
so has part: feature:535665-535812:1:exon
so has part: feature:536459-536576:1:exon
so has part: feature:537431-537590:1:exon
so has part: feature:537683-537802:1:exon
so has part: feature:538303-538389:1:exon
so has part: feature:539048-539210:1:exon
so has part: feature:539654-539739:1:exon
so has part: feature:540902-540967:1:exon
so has part: feature:543612-544808:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:469220-469383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:480219-480296:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:482292-482357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:500760-500911:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:503396-503480:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:507643-507853:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:508849-509008:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:515110-515251:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:515759-515875:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:517883-517939:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:519291-519359:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:519617-519706:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:519974-520083:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:524238-524823:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:525752-525868:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:528887-532753:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:535665-535812:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:536459-536576:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:537431-537590:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:537683-537802:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:538303-538389:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539048-539210:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:539654-539739:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:540902-540967:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:543612-544808:1:exon

MPRIP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MPRIP
product: myosin phosphatase Rho interacting protein, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 10 ESTs, 2 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030459967.1
SIO_010081: MPRIP
subclass of: SO_0000673
so part of: MPRIP
location: join(469220..469383,480219..480296,482292..482357,500760..500911,503396..503480,507643..507853,508849..509008,515110..515251,515759..515875,517883..517939,519291..519359,519617..519706,519974..520083,524238..524823,525752..525868,528887..532753,535665..535812,536459..536576,537431..537590,537683..537802,538303..538389,539048..539210,539654..539739,543612..544808)
location: region:469220-544808:1
so has part: feature:469220-469383:1:exon
so has part: feature:480219-480296:1:exon
so has part: feature:482292-482357:1:exon
so has part: feature:500760-500911:1:exon
so has part: feature:503396-503480:1:exon
so has part: feature:507643-507853:1:exon
so has part: feature:508849-509008:1:exon
so has part: feature:515110-515251:1:exon
so has part: feature:515759-515875:1:exon
so has part: feature:517883-517939:1:exon
so has part: feature:519291-519359:1:exon
so has part: feature:519617-519706:1:exon
so has part: feature:519974-520083:1:exon
so has part: feature:524238-524823:1:exon
so has part: feature:525752-525868:1:exon
so has part: feature:528887-532753:1:exon
so has part: feature:535665-535812:1:exon
so has part: feature:536459-536576:1:exon
so has part: feature:537431-537590:1:exon
so has part: feature:537683-537802:1:exon
so has part: feature:538303-538389:1:exon
so has part: feature:539048-539210:1:exon
so has part: feature:539654-539739:1:exon
so has part: feature:543612-544808:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:469220-469383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:480219-480296:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:482292-482357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:500760-500911:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:503396-503480:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:507643-507853:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:508849-509008:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:515110-515251:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:515759-515875:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:517883-517939:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:519291-519359:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:519617-519706:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:519974-520083:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:524238-524823:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:525752-525868:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:528887-532753:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:535665-535812:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:536459-536576:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:537431-537590:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:537683-537802:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:538303-538389:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539048-539210:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:539654-539739:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:543612-544808:1:exon

MPRIP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MPRIP
product: myosin phosphatase Rho interacting protein, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 2 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030459969.1
SIO_010081: MPRIP
subclass of: SO_0000673
so part of: MPRIP
location: join(469220..469383,480219..480296,482292..482357,500760..500911,503396..503480,507643..507853,508849..509008,515110..515251,515759..515875,517883..517939,519291..519359,519617..519706,519974..520083,524238..524823,525752..525868,535665..535812,536459..536576,537431..537590,537683..537802,538303..538389,539048..539210,539654..539739,543612..544808)
location: region:469220-544808:1
so has part: feature:469220-469383:1:exon
so has part: feature:480219-480296:1:exon
so has part: feature:482292-482357:1:exon
so has part: feature:500760-500911:1:exon
so has part: feature:503396-503480:1:exon
so has part: feature:507643-507853:1:exon
so has part: feature:508849-509008:1:exon
so has part: feature:515110-515251:1:exon
so has part: feature:515759-515875:1:exon
so has part: feature:517883-517939:1:exon
so has part: feature:519291-519359:1:exon
so has part: feature:519617-519706:1:exon
so has part: feature:519974-520083:1:exon
so has part: feature:524238-524823:1:exon
so has part: feature:525752-525868:1:exon
so has part: feature:535665-535812:1:exon
so has part: feature:536459-536576:1:exon
so has part: feature:537431-537590:1:exon
so has part: feature:537683-537802:1:exon
so has part: feature:538303-538389:1:exon
so has part: feature:539048-539210:1:exon
so has part: feature:539654-539739:1:exon
so has part: feature:543612-544808:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:469220-469383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:480219-480296:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:482292-482357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:500760-500911:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:503396-503480:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:507643-507853:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:508849-509008:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:515110-515251:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:515759-515875:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:517883-517939:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:519291-519359:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:519617-519706:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:519974-520083:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:524238-524823:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:525752-525868:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:535665-535812:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:536459-536576:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:537431-537590:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:537683-537802:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:538303-538389:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:539048-539210:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539654-539739:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:543612-544808:1:exon

MPRIP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MPRIP
product: myosin phosphatase Rho interacting protein, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_030459970.1
SIO_010081: MPRIP
subclass of: SO_0000673
so part of: MPRIP
location: join(469220..469383,480219..480296,482292..482357,500760..500911,503396..503480,507643..507853,508849..509008,515110..515251,515759..515875,517883..517939,519291..519359,519617..519706,519974..520083,524238..524823,525752..525868,535665..535812,536459..536576,537431..537590,537683..537802,538303..538389,539048..539210,539654..539739,540902..540967,543612..543697)
location: region:469220-543697:1
so has part: feature:469220-469383:1:exon
so has part: feature:480219-480296:1:exon
so has part: feature:482292-482357:1:exon
so has part: feature:500760-500911:1:exon
so has part: feature:503396-503480:1:exon
so has part: feature:507643-507853:1:exon
so has part: feature:508849-509008:1:exon
so has part: feature:515110-515251:1:exon
so has part: feature:515759-515875:1:exon
so has part: feature:517883-517939:1:exon
so has part: feature:519291-519359:1:exon
so has part: feature:519617-519706:1:exon
so has part: feature:519974-520083:1:exon
so has part: feature:524238-524823:1:exon
so has part: feature:525752-525868:1:exon
so has part: feature:535665-535812:1:exon
so has part: feature:536459-536576:1:exon
so has part: feature:537431-537590:1:exon
so has part: feature:537683-537802:1:exon
so has part: feature:538303-538389:1:exon
so has part: feature:539048-539210:1:exon
so has part: feature:539654-539739:1:exon
so has part: feature:540902-540967:1:exon
so has part: feature:543612-543697:1:exon

position:543697:1
position: 543697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469220-469383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:480219-480296:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:482292-482357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:500760-500911:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:503396-503480:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:507643-507853:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:508849-509008:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:515110-515251:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:515759-515875:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:517883-517939:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:519291-519359:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:519617-519706:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:519974-520083:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:524238-524823:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:525752-525868:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:535665-535812:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:536459-536576:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:537431-537590:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:537683-537802:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:538303-538389:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:539048-539210:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539654-539739:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:540902-540967:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:543612-543697:1:exon

MPRIP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MPRIP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin phosphatase Rho-interacting protein isoform X1
translation: MAAKDNPCRKFQANIFNKSKCQNCFKPRESHLLNDEDLNQAKPIYGGWLLLAPEGTDFDNPVHRSRKWQRRFFILYEHGLLRYALDEMPTTLPQGTINMNQCTDVVDGESRTGQKFSLCILTPEKEHFIRAENKEIISGWLEMLIVYPRTNKQNQKKKRKVEPPTPQEPGPAKMAVTSSNIPSAEKVPATKSTLWQEEMRGKDQADGGSGISSTQSPVQGQAGSASSLKDPVLDSKEEESSMNGDRIDCGRKTRVESGYFSLEKTKQDSKLEEQQLPPPPSPPSPSTPNNRYSYPKSPSQEHAQPFPSPGTRSGDRMIHSFSLNSLDSKSSSSMHKDSSSRDVGRGAEKSGRPLSFKASRQYTTLADVPKAIRISNREAFQVERKRLERKTRARSPGREEVARLFGNERRRSQVIEKFEALDIENAEHMETNTSGGASLSSETRQGRSEKRVFPRKRDFTSEGAAVGSILDVSASPLSPHRRAKSLDRRSTESSMTPDLLNFKKGWLTKQYEDGQWKKHWFVLTDQSLRYYRDSVAEEAADLDGEIDLSTCYDVTEYPVQRNYGFQIHTKEGEFTLSAMTSGIRRNWIQTIMKHVRPTTAPDVTSSLPEEKSKTSSSFETAPKPSEKPDAEQAELDPEQKRSRARERRREGRSKTFDWAEFRPIQQALAQERANAADSSRNTSATFSRDTGATDADSGELERERARRREERRKRFEMIDTVDGAGTEEALRMEVDRILPVPGDIKPQNVHVEIEQRWHQVETTPLREEKQIPITPLHLAHAEEREEGLAKQHLTTLLEKELEQKQKEALDLLEQNRHLQDQLKVALGREQSAREGYVLQTEVAASPSGAWQRLHKVNQDLQSELEAQCQRQELINQQIQSLKRSYAEAKDVIRHHEAEIQSLQARLSNAAAELSIKEQTLAKLKNDLRSEKVKAKEQLEEWQHGEAALSSQLKASEQKLKNAEALLLEKTQELRNLEMQQALQRDHQKEVQRLQDRIADLGRQLNASEQTRILMEEKLQKNYEALLESCEREKQVLLRSLKEVEDKANEYENQLQNNEQQMEILQKEKLSAKFEGSELVHQLEEQLVMKEASIQKLAEHIKELERERDQIKCRFHELMNQVAESDNEVAKLQAKLKMEEANYHNLEQSFEEVSDQFQGVQKVLKEKEEELRHVKEMHLRIVEKKDQDLSEALVKMVALDSSLEEAKVKLKAKEEALKKLSCAGTGPCAEEAEDLGLNLEADENQLGQPLQTQDVLPALTYALKEEEEEEEEVLEPSQRQAEEFGSPSKGVELQDQELVQKALAKPDVGIMGAKRQRIRFSSIQCQKYIHPDGSEKNWTSSTSSDTSQDRSLSEESMSSEPAPGYPSTGTSDSETYLSIIHSLETKLYITEEKLKDVTMKLESQHGHNQETLIALHHQWASTESQLREQLQTSLSQVSALISQLESERQEKFKLIENHVSELGGFQMKNDQALTCLEKCREQLRSLPKSDEEKEGDLFLVTLSSMETTLSNAIQALRGAPDPSEYQQSESLISESPTPEGGFLGEEEHVSKEQQAEGFDAGQLRWLSERVAFEASLINQIAESLKNASSEISQLLREIQGTAEMALLEPANVSPTAVDLASVLSKKLLLEGEFWSQVEELRVHLSTREGEAEGKTETTGLGFSPCFLSTVADATLIKAELGFVAQKMRESFHQRLKTIEEDLHNTKTALQQHKCMLEEIIKVYRTPDFDRVMHQISEALEIQKDASERTQISWDRSHLQVVPGQELAKTEEIGSLPDSSSEALVSIQEDLAQQLKDKSNVLKEISVALLSLPPEEAMRDCQKLLKISQSLSYHACMGDLERYSSLLVQDAIIQAQVCYAACKVRLEYERELKSYRESLQSMDVLCQERVKTVSLLRDEYEELLRKQQGEYGEVIAMLERENADLKAKVSQLESQRRLLEEEEHKHSKSLSELQGRYEEEIRNVIEQLNRTEDALKAERTEGLNQLDAIVRDKQNMEQYHLE…
SIO_010081: MPRIP
subclass of: SO_0000673
so part of: MPRIP
location: join(469264..469383,480219..480296,482292..482357,500760..500911,503396..503480,507643..507853,508849..509365,515110..515251,515759..515875,517883..517939,519291..519359,519617..519706,519974..520083,524238..524823,525752..525868,528887..532753,535665..535812,536459..536576,537431..537590,537683..537802,538303..538389,539048..539210,539654..539739,543612..543683)
location: region:469264-543683:1
so has part: feature:469264-469383:1:exon
so has part: feature:480219-480296:1:exon
so has part: feature:482292-482357:1:exon
so has part: feature:500760-500911:1:exon
so has part: feature:503396-503480:1:exon
so has part: feature:507643-507853:1:exon
so has part: feature:508849-509365:1:exon
so has part: feature:515110-515251:1:exon
so has part: feature:515759-515875:1:exon
so has part: feature:517883-517939:1:exon
so has part: feature:519291-519359:1:exon
so has part: feature:519617-519706:1:exon
so has part: feature:519974-520083:1:exon
so has part: feature:524238-524823:1:exon
so has part: feature:525752-525868:1:exon
so has part: feature:528887-532753:1:exon
so has part: feature:535665-535812:1:exon
so has part: feature:536459-536576:1:exon
so has part: feature:537431-537590:1:exon
so has part: feature:537683-537802:1:exon
so has part: feature:538303-538389:1:exon
so has part: feature:539048-539210:1:exon
so has part: feature:539654-539739:1:exon
so has part: feature:543612-543683:1:exon

XP_030315822.1
type: Protein
SIO_000068: ncbiprotein

position:469264:1
position: 469264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543683:1
position: 543683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469264-469383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:480219-480296:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:482292-482357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:500760-500911:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:503396-503480:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:507643-507853:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:508849-509365:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:515110-515251:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:515759-515875:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:517883-517939:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:519291-519359:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:519617-519706:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:519974-520083:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:524238-524823:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:525752-525868:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:528887-532753:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:535665-535812:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:536459-536576:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:537431-537590:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:537683-537802:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:538303-538389:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539048-539210:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:539654-539739:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:543612-543683:1:exon

MPRIP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MPRIP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin phosphatase Rho-interacting protein isoform X3
translation: MAAKDNPCRKFQANIFNKSKCQNCFKPRESHLLNDEDLNQAKPIYGGWLLLAPEGTDFDNPVHRSRKWQRRFFILYEHGLLRYALDEMPTTLPQGTINMNQCTDVVDGESRTGQKFSLCILTPEKEHFIRAENKEIISGWLEMLIVYPRTNKQNQKKKRKVEPPTPQEPGPAKMAVTSSNIPSAEKVPATKSTLWQEEMRGKDQADGGSGISSTQSPVQGQAGSASSLKDPVLDSKEEESSMNGDRIDCGRKTRVESGYFSLEKTKQDSKLEEQQLPPPPSPPSPSTPNNSSSMHKDSSSRDVGRGAEKSGRPLSFKASRQYTTLADVPKAIRISNREAFQVERKRLERKTRARSPGREEVARLFGNERRRSQVIEKFEALDIENAEHMETNTSGGASLSSETRQGRSEKRVFPRKRDFTSEGAAVGSILDVSASPLSPHRRAKSLDRRSTESSMTPDLLNFKKGWLTKQYEDGQWKKHWFVLTDQSLRYYRDSVAEEAADLDGEIDLSTCYDVTEYPVQRNYGFQIHTKEGEFTLSAMTSGIRRNWIQTIMKHVRPTTAPDVTSSLPEEKSKTSSSFETAPKPSEKPDAEQAELDPEQKRSRARERRREGRSKTFDWAEFRPIQQALAQERANAADSSRNTSATFSRDTGATDADSGELERERARRREERRKRFEMIDTVDGAGTEEALRMEVDRILPVPGDIKPQNVHVEIEQRWHQVETTPLREEKQIPITPLHLAHAEEREEGLAKQHLTTLLEKELEQKQKEALDLLEQNRHLQDQLKVALGREQSAREGYVLQTEVAASPSGAWQRLHKVNQDLQSELEAQCQRQELINQQIQSLKRSYAEAKDVIRHHEAEIQSLQARLSNAAAELSIKEQTLAKLKNDLRSEKVKAKEQLEEWQHGEAALSSQLKASEQKLKNAEALLLEKTQELRNLEMQQALQRDHQKEVQRLQDRIADLGRQLNASEQTRILMEEKLQKNYEALLESCEREKQVLLRSLKEVEDKANEYENQLQNNEQQMEILQKEKLSAKFEGSELVHQLEEQLVMKEASIQKLAEHIKELERERDQIKCRFHELMNQVAESDNEVAKLQAKLKMEEANYHNLEQSFEEVSDQFQGVQKVLKEKEEELRHVKEMHLRIVEKKDQDLSEALVKMVALDSSLEEAKVKLKAKEEALKKLSCAGTGPCAEEAEDLGLNLEADENQLGQPLQTQDVLPALTYALKEEEEEEEEVLEPSQRQAEEFGSPSKGVELQDQELVQKALAKPDVGIMGAKRQRIRFSSIQCQKYIHPDGSEKNWTSSTSSDTSQDRSLSEESMSSEPAPGYPSTGTSDSETYLSIIHSLETKLYITEEKLKDVTMKLESQHGHNQETLIALHHQWASTESQLREQLQTSLSQVSALISQLESERQEKFKLIENHVSELGGFQMKNDQALTCLEKCREQLRSLPKSDEEKEGDLFLVTLSSMETTLSNAIQALRGAPDPSEYQQSESLISESPTPEGGFLGEEEHVSKEQQAEGFDAGQLRWLSERVAFEASLINQIAESLKNASSEISQLLREIQGTAEMALLEPANVSPTAVDLASVLSKKLLLEGEFWSQVEELRVHLSTREGEAEGKTETTGLGFSPCFLSTVADATLIKAELGFVAQKMRESFHQRLKTIEEDLHNTKTALQQHKCMLEEIIKVYRTPDFDRVMHQISEALEIQKDASERTQISWDRSHLQVVPGQELAKTEEIGSLPDSSSEALVSIQEDLAQQLKDKSNVLKEISVALLSLPPEEAMRDCQKLLKISQSLSYHACMGDLERYSSLLVQDAIIQAQVCYAACKVRLEYERELKSYRESLQSMDVLCQERVKTVSLLRDEYEELLRKQQGEYGEVIAMLERENADLKAKVSQLESQRRLLEEEEHKHSKSLSELQGRYEEEIRNVIEQLNRTEDALKAERTEGLNQLDAIVRDKQNMEQYHLEQMQMLEDKFQAKIKELQVIHGEELQALQEHYSQNLQHLQE…
SIO_010081: MPRIP
subclass of: SO_0000673
so part of: MPRIP
location: join(469264..469383,480219..480296,482292..482357,500760..500911,503396..503480,507643..507853,508849..509008,509129..509365,515110..515251,515759..515875,517883..517939,519291..519359,519617..519706,519974..520083,524238..524823,525752..525868,528887..532753,535665..535812,536459..536576,537431..537590,537683..537802,538303..538389,539048..539210,539654..539739,543612..543683)
location: region:469264-543683:1
so has part: feature:469264-469383:1:exon
so has part: feature:480219-480296:1:exon
so has part: feature:482292-482357:1:exon
so has part: feature:500760-500911:1:exon
so has part: feature:503396-503480:1:exon
so has part: feature:507643-507853:1:exon
so has part: feature:508849-509008:1:exon
so has part: feature:509129-509365:1:exon
so has part: feature:515110-515251:1:exon
so has part: feature:515759-515875:1:exon
so has part: feature:517883-517939:1:exon
so has part: feature:519291-519359:1:exon
so has part: feature:519617-519706:1:exon
so has part: feature:519974-520083:1:exon
so has part: feature:524238-524823:1:exon
so has part: feature:525752-525868:1:exon
so has part: feature:528887-532753:1:exon
so has part: feature:535665-535812:1:exon
so has part: feature:536459-536576:1:exon
so has part: feature:537431-537590:1:exon
so has part: feature:537683-537802:1:exon
so has part: feature:538303-538389:1:exon
so has part: feature:539048-539210:1:exon
so has part: feature:539654-539739:1:exon
so has part: feature:543612-543683:1:exon

XP_030315826.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469264-469383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:480219-480296:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:482292-482357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:500760-500911:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:503396-503480:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:507643-507853:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:508849-509008:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:509129-509365:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:515110-515251:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:515759-515875:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:517883-517939:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:519291-519359:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:519617-519706:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:519974-520083:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:524238-524823:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:525752-525868:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:528887-532753:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:535665-535812:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:536459-536576:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:537431-537590:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:537683-537802:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:538303-538389:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:539048-539210:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:539654-539739:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:543612-543683:1:exon

MPRIP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MPRIP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin phosphatase Rho-interacting protein isoform X4
translation: MAAKDNPCRKFQANIFNKSKCQNCFKPRESHLLNDEDLNQAKPIYGGWLLLAPEGTDFDNPVHRSRKWQRRFFILYEHGLLRYALDEMPTTLPQGTINMNQCTDVVDGESRTGQKFSLCILTPEKEHFIRAENKEIISGWLEMLIVYPRTNKQNQKKKRKVEPPTPQEPGPAKMAVTSSNIPSAEKVPATKSTLWQEEMRGKDQADGGSGISSTQSPVQGQAGSASSLKDPVLDSKEEESSMNGDRIDCGRKTRVESGYFSLEKTKQDSKLEEQQLPPPPSPPSPSTPNNRRSQVIEKFEALDIENAEHMETNTSGGASLSSETRQGRSEKRVFPRKRDFTSEGAAVGSILDVSASPLSPHRRAKSLDRRSTESSMTPDLLNFKKGWLTKQYEDGQWKKHWFVLTDQSLRYYRDSVAEEAADLDGEIDLSTCYDVTEYPVQRNYGFQIHTKEGEFTLSAMTSGIRRNWIQTIMKHVRPTTAPDVTSSLPEEKSKTSSSFETAPKPSEKPDAEQAELDPEQKRSRARERRREGRSKTFDWAEFRPIQQALAQERANAADSSRNTSATFSRDTGATDADSGELERERARRREERRKRFEMIDTVDGAGTEEALRMEVDRILPVPGDIKPQNVHVEIEQRWHQVETTPLREEKQIPITPLHLAHAEEREEGLAKQHLTTLLEKELEQKQKEALDLLEQNRHLQDQLKVALGREQSAREGYVLQTEVAASPSGAWQRLHKVNQDLQSELEAQCQRQELINQQIQSLKRSYAEAKDVIRHHEAEIQSLQARLSNAAAELSIKEQTLAKLKNDLRSEKVKAKEQLEEWQHGEAALSSQLKASEQKLKNAEALLLEKTQELRNLEMQQALQRDHQKEVQRLQDRIADLGRQLNASEQTRILMEEKLQKNYEALLESCEREKQVLLRSLKEVEDKANEYENQLQNNEQQMEILQKEKLSAKFEGSELVHQLEEQLVMKEASIQKLAEHIKELERERDQIKCRFHELMNQVAESDNEVAKLQAKLKMEEANYHNLEQSFEEVSDQFQGVQKVLKEKEEELRHVKEMHLRIVEKKDQDLSEALVKMVALDSSLEEAKVKLKAKEEALKKLSCAGTGPCAEEAEDLGLNLEADENQLGQPLQTQDVLPALTYALKEEEEEEEEVLEPSQRQAEEFGSPSKGVELQDQELVQKALAKPDVGIMGAKRQRIRFSSIQCQKYIHPDGSEKNWTSSTSSDTSQDRSLSEESMSSEPAPGYPSTGTSDSETYLSIIHSLETKLYITEEKLKDVTMKLESQHGHNQETLIALHHQWASTESQLREQLQTSLSQVSALISQLESERQEKFKLIENHVSELGGFQMKNDQALTCLEKCREQLRSLPKSDEEKEGDLFLVTLSSMETTLSNAIQALRGAPDPSEYQQSESLISESPTPEGGFLGEEEHVSKEQQAEGFDAGQLRWLSERVAFEASLINQIAESLKNASSEISQLLREIQGTAEMALLEPANVSPTAVDLASVLSKKLLLEGEFWSQVEELRVHLSTREGEAEGKTETTGLGFSPCFLSTVADATLIKAELGFVAQKMRESFHQRLKTIEEDLHNTKTALQQHKCMLEEIIKVYRTPDFDRVMHQISEALEIQKDASERTQISWDRSHLQVVPGQELAKTEEIGSLPDSSSEALVSIQEDLAQQLKDKSNVLKEISVALLSLPPEEAMRDCQKLLKISQSLSYHACMGDLERYSSLLVQDAIIQAQVCYAACKVRLEYERELKSYRESLQSMDVLCQERVKTVSLLRDEYEELLRKQQGEYGEVIAMLERENADLKAKVSQLESQRRLLEEEEHKHSKSLSELQGRYEEEIRNVIEQLNRTEDALKAERTEGLNQLDAIVRDKQNMEQYHLEQMQMLEDKFQAKIKELQVIHGEELQALQEHYSQNLQHLQETLDEYQRQHPEVSPAAGPGGGDTWVADEADGTGQGPGGDLDSMHGLRERIQELEAQMNVMRDELENKHLEGNASTLREK…
SIO_010081: MPRIP
subclass of: SO_0000673
so part of: MPRIP
location: join(469264..469383,480219..480296,482292..482357,500760..500911,503396..503480,507643..507853,508849..509008,515110..515251,515759..515875,517883..517939,519291..519359,519617..519706,519974..520083,524238..524823,525752..525868,528887..532753,535665..535812,536459..536576,537431..537590,537683..537802,538303..538389,539048..539210,539654..539739,543612..543683)
location: region:469264-543683:1
so has part: feature:469264-469383:1:exon
so has part: feature:480219-480296:1:exon
so has part: feature:482292-482357:1:exon
so has part: feature:500760-500911:1:exon
so has part: feature:503396-503480:1:exon
so has part: feature:507643-507853:1:exon
so has part: feature:508849-509008:1:exon
so has part: feature:515110-515251:1:exon
so has part: feature:515759-515875:1:exon
so has part: feature:517883-517939:1:exon
so has part: feature:519291-519359:1:exon
so has part: feature:519617-519706:1:exon
so has part: feature:519974-520083:1:exon
so has part: feature:524238-524823:1:exon
so has part: feature:525752-525868:1:exon
so has part: feature:528887-532753:1:exon
so has part: feature:535665-535812:1:exon
so has part: feature:536459-536576:1:exon
so has part: feature:537431-537590:1:exon
so has part: feature:537683-537802:1:exon
so has part: feature:538303-538389:1:exon
so has part: feature:539048-539210:1:exon
so has part: feature:539654-539739:1:exon
so has part: feature:543612-543683:1:exon

XP_030315827.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469264-469383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:480219-480296:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:482292-482357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:500760-500911:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:503396-503480:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:507643-507853:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:508849-509008:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:515110-515251:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:515759-515875:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:517883-517939:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:519291-519359:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:519617-519706:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:519974-520083:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:524238-524823:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:525752-525868:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:528887-532753:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:535665-535812:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:536459-536576:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:537431-537590:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:537683-537802:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:538303-538389:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539048-539210:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:539654-539739:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:543612-543683:1:exon

MPRIP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MPRIP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin phosphatase Rho-interacting protein isoform X6
translation: MAAKDNPCRKFQANIFNKSKCQNCFKPRESHLLNDEDLNQAKPIYGGWLLLAPEGTDFDNPVHRSRKWQRRFFILYEHGLLRYALDEMPTTLPQGTINMNQCTDVVDGESRTGQKFSLCILTPEKEHFIRAENKEIISGWLEMLIVYPRTNKQNQKKKRKVEPPTPQEPGPAKMAVTSSNIPSAEKVPATKSTLWQEEMRGKDQADGGSGISSTQSPVQGQAGSASSLKDPVLDSKEEESSMNGDRIDCGRKTRVESGYFSLEKTKQDSKLEEQQLPPPPSPPSPSTPNNRRSQVIEKFEALDIENAEHMETNTSGGASLSSETRQGRSEKRVFPRKRDFTSEGAAVGSILDVSASPLSPHRRAKSLDRRSTESSMTPDLLNFKKGWLTKQYEDGQWKKHWFVLTDQSLRYYRDSVAEEAADLDGEIDLSTCYDVTEYPVQRNYGFQIHTKEGEFTLSAMTSGIRRNWIQTIMKHVRPTTAPDVTSSLPEEKSKTSSSFETAPKPSEKPDAEQAELDPEQKRSRARERRREGRSKTFDWAEFRPIQQALAQERANAADSSRNTSATFSRDTGATDADSGELERERARRREERRKRFEMIDTVDGAGTEEALRMEVDRILPVPGDIKPQNVHVEIEQRWHQVETTPLREEKQIPITPLHLAHAEEREEGLAKQHLTTLLEKELEQKQKEALDLLEQNRHLQDQLKVALGREQSAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATISAIEAMKNAHREELERELEKSQRSQISSVNADIEALRRQYLEELQSVQRELEVLSEQYSQKCLENAHLAQALEAERQALRQCQRENQELNAHNQELNNRLAAEITRLRTLLTGEGGGEAAGSPLTQGKDAYELEVLLRVKESEIQYLKQEISSLKDELQTALRDKKYASDKYKDIYTELSIVKAKADCDISRLKEQLKAATEAQGEKSPVNTTVSGYDIMKSKSNPDFLKKDRSSVSRQLRNIRSKSLKEGLTVQERLKLFESRDLKNE
SIO_010081: MPRIP
subclass of: SO_0000673
so part of: MPRIP
location: join(469264..469383,480219..480296,482292..482357,500760..500911,503396..503480,507643..507853,508849..509008,515110..515251,515759..515875,517883..517939,519291..519359,519617..519706,519974..520083,524238..524823,525752..525868,535665..535812,536459..536576,537431..537590,537683..537802,538303..538389,539048..539210,539654..539739,543612..543683)
location: region:469264-543683:1
so has part: feature:469264-469383:1:exon
so has part: feature:480219-480296:1:exon
so has part: feature:482292-482357:1:exon
so has part: feature:500760-500911:1:exon
so has part: feature:503396-503480:1:exon
so has part: feature:507643-507853:1:exon
so has part: feature:508849-509008:1:exon
so has part: feature:515110-515251:1:exon
so has part: feature:515759-515875:1:exon
so has part: feature:517883-517939:1:exon
so has part: feature:519291-519359:1:exon
so has part: feature:519617-519706:1:exon
so has part: feature:519974-520083:1:exon
so has part: feature:524238-524823:1:exon
so has part: feature:525752-525868:1:exon
so has part: feature:535665-535812:1:exon
so has part: feature:536459-536576:1:exon
so has part: feature:537431-537590:1:exon
so has part: feature:537683-537802:1:exon
so has part: feature:538303-538389:1:exon
so has part: feature:539048-539210:1:exon
so has part: feature:539654-539739:1:exon
so has part: feature:543612-543683:1:exon

XP_030315829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469264-469383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:480219-480296:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:482292-482357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:500760-500911:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:503396-503480:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:507643-507853:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:508849-509008:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:515110-515251:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:515759-515875:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:517883-517939:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:519291-519359:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:519617-519706:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:519974-520083:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:524238-524823:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:525752-525868:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:535665-535812:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:536459-536576:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:537431-537590:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:537683-537802:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:538303-538389:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:539048-539210:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539654-539739:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:543612-543683:1:exon

MPRIP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MPRIP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin phosphatase Rho-interacting protein isoform X2
translation: MAAKDNPCRKFQANIFNKSKCQNCFKPRESHLLNDEDLNQAKPIYGGWLLLAPEGTDFDNPVHRSRKWQRRFFILYEHGLLRYALDEMPTTLPQGTINMNQCTDVVDGESRTGQKFSLCILTPEKEHFIRAENKEIISGWLEMLIVYPRTNKQNQKKKRKVEPPTPQEPGPAKMAVTSSNIPSAEKVPATKSTLWQEEMRGKDQADGGSGISSTQSPVQGQAGSASSLKDPVLDSKEEESSMNGDRIDCGRKTRVESGYFSLEKTKQDSKLEEQQLPPPPSPPSPSTPNNRYSYPKSPSQEHAQPFPSPGTRSGDRMIHSFSLNSLDSKSSSSMHKDSSSRDVGRGAEKSGRPLSFKASRQYTTLADVPKAIRISNREAFQVERKRLERKTRARSPGREEVARLFGNERRRSQVIEKFEALDIENAEHMETNTSGGASLSSETRQGRSEKRVFPRKRDFTSEGAAVGSILDVSASPLSPHRRAKSLDRRSTESSMTPDLLNFKKGWLTKQYEDGQWKKHWFVLTDQSLRYYRDSVAEEAADLDGEIDLSTCYDVTEYPVQRNYGFQIHTKEGEFTLSAMTSGIRRNWIQTIMKHVRPTTAPDVTSSLPEEKSKTSSSFETAPKPSEKPDAEQAELDPEQKRSRARERRREGRSKTFDWAEFRPIQQALAQERANAADSSRNTSATFSRDTGATDADSGELERERARRREERRKRFEMIDTVDGAGTEEALRMEVDRILPVPGDIKPQNVHVEIEQRWHQVETTPLREEKQIPITPLHLAHAEEREEGLAKQHLTTLLEKELEQKQKEALDLLEQNRHLQDQLKVALGREQSAREGYVLQTEVAASPSGAWQRLHKVNQDLQSELEAQCQRQELINQQIQSLKRSYAEAKDVIRHHEAEIQSLQARLSNAAAELSIKEQTLAKLKNDLRSEKVKAKEQLEEWQHGEAALSSQLKASEQKLKNAEALLLEKTQELRNLEMQQALQRDHQKEVQRLQDRIADLGRQLNASEQTRILMEEKLQKNYEALLESCEREKQVLLRSLKEVEDKANEYENQLQNNEQQMEILQKEKLSAKFEGSELVHQLEEQLVMKEASIQKLAEHIKELERERDQIKCRFHELMNQVAESDNEVAKLQAKLKMEEANYHNLEQSFEEVSDQFQGVQKVLKEKEEELRHVKEMHLRIVEKKDQDLSEALVKMVALDSSLEEAKVKLKAKEEALKKLSCAGTGPCAEEAEDLGLNLEADENQLGQPLQTQDVLPALTYALKEEEEEEEEVLEPSQRQAEEFGSPSKGVELQDQELVQKALAKPDVGIMGAKRQRIRFSSIQCQKYIHPDGSEKNWTSSTSSDTSQDRSLSEESMSSEPAPGYPSTGTSDSETYLSIIHSLETKLYITEEKLKDVTMKLESQHGHNQETLIALHHQWASTESQLREQLQTSLSQVSALISQLESERQEKFKLIENHVSELGGFQMKNDQALTCLEKCREQLRSLPKSDEEKEGDLFLVTLSSMETTLSNAIQALRGAPDPSEYQQSESLISESPTPEGGFLGEEEHVSKEQQAEGFDAGQLRWLSERVAFEASLINQIAESLKNASSEISQLLREIQGTAEMALLEPANVSPTAVDLASVLSKKLLLEGEFWSQVEELRVHLSTREGEAEGKTETTGLGFSPCFLSTVADATLIKAELGFVAQKMRESFHQRLKTIEEDLHNTKTALQQHKCMLEEIIKVYRTPDFDRVMHQISEALEIQKDASERTQISWDRSHLQVVPGQELAKTEEIGSLPDSSSEALVSIQEDLAQQLKDKSNVLKEISVALLSLPPEEAMRDCQKLLKISQSLSYHACMGDLERYSSLLVQDAIIQAQVCYAACKVRLEYERELKSYRESLQSMDVLCQERVKTVSLLRDEYEELLRKQQGEYGEVIAMLERENADLKAKVSQLESQRRLLEEEEHKHSKSLSELQGRYEEEIRNVIEQLNRTEDALKAERTEGLNQLDAIVRDKQNMEQYHLE…
SIO_010081: MPRIP
subclass of: SO_0000673
so part of: MPRIP
location: join(469264..469383,480219..480296,482292..482357,500760..500911,503396..503480,507643..507853,508849..509365,515110..515251,515759..515875,517883..517939,519291..519359,519617..519706,519974..520083,524238..524823,525752..525868,528887..532753,535665..535812,536459..536576,537431..537590,537683..537802,538303..538389,539048..539210,539654..539739,540902..540934)
location: region:469264-540934:1
so has part: feature:469264-469383:1:exon
so has part: feature:480219-480296:1:exon
so has part: feature:482292-482357:1:exon
so has part: feature:500760-500911:1:exon
so has part: feature:503396-503480:1:exon
so has part: feature:507643-507853:1:exon
so has part: feature:508849-509365:1:exon
so has part: feature:515110-515251:1:exon
so has part: feature:515759-515875:1:exon
so has part: feature:517883-517939:1:exon
so has part: feature:519291-519359:1:exon
so has part: feature:519617-519706:1:exon
so has part: feature:519974-520083:1:exon
so has part: feature:524238-524823:1:exon
so has part: feature:525752-525868:1:exon
so has part: feature:528887-532753:1:exon
so has part: feature:535665-535812:1:exon
so has part: feature:536459-536576:1:exon
so has part: feature:537431-537590:1:exon
so has part: feature:537683-537802:1:exon
so has part: feature:538303-538389:1:exon
so has part: feature:539048-539210:1:exon
so has part: feature:539654-539739:1:exon
so has part: feature:540902-540934:1:exon

XP_030315823.1
type: Protein
SIO_000068: ncbiprotein

position:540934:1
position: 540934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469264-469383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:480219-480296:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:482292-482357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:500760-500911:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:503396-503480:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:507643-507853:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:508849-509365:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:515110-515251:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:515759-515875:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:517883-517939:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:519291-519359:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:519617-519706:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:519974-520083:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:524238-524823:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:525752-525868:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:528887-532753:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:535665-535812:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:536459-536576:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:537431-537590:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:537683-537802:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:538303-538389:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539048-539210:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:539654-539739:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:540902-540934:1:exon

MPRIP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MPRIP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin phosphatase Rho-interacting protein isoform X2
translation: MAAKDNPCRKFQANIFNKSKCQNCFKPRESHLLNDEDLNQAKPIYGGWLLLAPEGTDFDNPVHRSRKWQRRFFILYEHGLLRYALDEMPTTLPQGTINMNQCTDVVDGESRTGQKFSLCILTPEKEHFIRAENKEIISGWLEMLIVYPRTNKQNQKKKRKVEPPTPQEPGPAKMAVTSSNIPSAEKVPATKSTLWQEEMRGKDQADGGSGISSTQSPVQGQAGSASSLKDPVLDSKEEESSMNGDRIDCGRKTRVESGYFSLEKTKQDSKLEEQQLPPPPSPPSPSTPNNRYSYPKSPSQEHAQPFPSPGTRSGDRMIHSFSLNSLDSKSSSSMHKDSSSRDVGRGAEKSGRPLSFKASRQYTTLADVPKAIRISNREAFQVERKRLERKTRARSPGREEVARLFGNERRRSQVIEKFEALDIENAEHMETNTSGGASLSSETRQGRSEKRVFPRKRDFTSEGAAVGSILDVSASPLSPHRRAKSLDRRSTESSMTPDLLNFKKGWLTKQYEDGQWKKHWFVLTDQSLRYYRDSVAEEAADLDGEIDLSTCYDVTEYPVQRNYGFQIHTKEGEFTLSAMTSGIRRNWIQTIMKHVRPTTAPDVTSSLPEEKSKTSSSFETAPKPSEKPDAEQAELDPEQKRSRARERRREGRSKTFDWAEFRPIQQALAQERANAADSSRNTSATFSRDTGATDADSGELERERARRREERRKRFEMIDTVDGAGTEEALRMEVDRILPVPGDIKPQNVHVEIEQRWHQVETTPLREEKQIPITPLHLAHAEEREEGLAKQHLTTLLEKELEQKQKEALDLLEQNRHLQDQLKVALGREQSAREGYVLQTEVAASPSGAWQRLHKVNQDLQSELEAQCQRQELINQQIQSLKRSYAEAKDVIRHHEAEIQSLQARLSNAAAELSIKEQTLAKLKNDLRSEKVKAKEQLEEWQHGEAALSSQLKASEQKLKNAEALLLEKTQELRNLEMQQALQRDHQKEVQRLQDRIADLGRQLNASEQTRILMEEKLQKNYEALLESCEREKQVLLRSLKEVEDKANEYENQLQNNEQQMEILQKEKLSAKFEGSELVHQLEEQLVMKEASIQKLAEHIKELERERDQIKCRFHELMNQVAESDNEVAKLQAKLKMEEANYHNLEQSFEEVSDQFQGVQKVLKEKEEELRHVKEMHLRIVEKKDQDLSEALVKMVALDSSLEEAKVKLKAKEEALKKLSCAGTGPCAEEAEDLGLNLEADENQLGQPLQTQDVLPALTYALKEEEEEEEEVLEPSQRQAEEFGSPSKGVELQDQELVQKALAKPDVGIMGAKRQRIRFSSIQCQKYIHPDGSEKNWTSSTSSDTSQDRSLSEESMSSEPAPGYPSTGTSDSETYLSIIHSLETKLYITEEKLKDVTMKLESQHGHNQETLIALHHQWASTESQLREQLQTSLSQVSALISQLESERQEKFKLIENHVSELGGFQMKNDQALTCLEKCREQLRSLPKSDEEKEGDLFLVTLSSMETTLSNAIQALRGAPDPSEYQQSESLISESPTPEGGFLGEEEHVSKEQQAEGFDAGQLRWLSERVAFEASLINQIAESLKNASSEISQLLREIQGTAEMALLEPANVSPTAVDLASVLSKKLLLEGEFWSQVEELRVHLSTREGEAEGKTETTGLGFSPCFLSTVADATLIKAELGFVAQKMRESFHQRLKTIEEDLHNTKTALQQHKCMLEEIIKVYRTPDFDRVMHQISEALEIQKDASERTQISWDRSHLQVVPGQELAKTEEIGSLPDSSSEALVSIQEDLAQQLKDKSNVLKEISVALLSLPPEEAMRDCQKLLKISQSLSYHACMGDLERYSSLLVQDAIIQAQVCYAACKVRLEYERELKSYRESLQSMDVLCQERVKTVSLLRDEYEELLRKQQGEYGEVIAMLERENADLKAKVSQLESQRRLLEEEEHKHSKSLSELQGRYEEEIRNVIEQLNRTEDALKAERTEGLNQLDAIVRDKQNMEQYHLE…
SIO_010081: MPRIP
subclass of: SO_0000673
so part of: MPRIP
location: join(469264..469383,480219..480296,482292..482357,500760..500911,503396..503480,507643..507853,508849..509365,515110..515251,515759..515875,517883..517939,519291..519359,519617..519706,519974..520083,524238..524823,525752..525868,528887..532753,535665..535812,536459..536576,537431..537590,537683..537802,538303..538389,539048..539210,539654..539739,540902..540934)
location: region:469264-540934:1
so has part: feature:469264-469383:1:exon
so has part: feature:480219-480296:1:exon
so has part: feature:482292-482357:1:exon
so has part: feature:500760-500911:1:exon
so has part: feature:503396-503480:1:exon
so has part: feature:507643-507853:1:exon
so has part: feature:508849-509365:1:exon
so has part: feature:515110-515251:1:exon
so has part: feature:515759-515875:1:exon
so has part: feature:517883-517939:1:exon
so has part: feature:519291-519359:1:exon
so has part: feature:519617-519706:1:exon
so has part: feature:519974-520083:1:exon
so has part: feature:524238-524823:1:exon
so has part: feature:525752-525868:1:exon
so has part: feature:528887-532753:1:exon
so has part: feature:535665-535812:1:exon
so has part: feature:536459-536576:1:exon
so has part: feature:537431-537590:1:exon
so has part: feature:537683-537802:1:exon
so has part: feature:538303-538389:1:exon
so has part: feature:539048-539210:1:exon
so has part: feature:539654-539739:1:exon
so has part: feature:540902-540934:1:exon

XP_030315825.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469264-469383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:480219-480296:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:482292-482357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:500760-500911:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:503396-503480:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:507643-507853:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:508849-509365:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:515110-515251:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:515759-515875:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:517883-517939:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:519291-519359:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:519617-519706:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:519974-520083:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:524238-524823:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:525752-525868:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:528887-532753:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:535665-535812:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:536459-536576:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:537431-537590:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:537683-537802:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:538303-538389:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539048-539210:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:539654-539739:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:540902-540934:1:exon

MPRIP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MPRIP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin phosphatase Rho-interacting protein isoform X5
translation: MAAKDNPCRKFQANIFNKSKCQNCFKPRESHLLNDEDLNQAKPIYGGWLLLAPEGTDFDNPVHRSRKWQRRFFILYEHGLLRYALDEMPTTLPQGTINMNQCTDVVDGESRTGQKFSLCILTPEKEHFIRAENKEIISGWLEMLIVYPRTNKQNQKKKRKVEPPTPQEPGPAKMAVTSSNIPSAEKVPATKSTLWQEEMRGKDQADGGSGISSTQSPVQGQAGSASSLKDPVLDSKEEESSMNGDRIDCGRKTRVESGYFSLEKTKQDSKLEEQQLPPPPSPPSPSTPNNRRSQVIEKFEALDIENAEHMETNTSGGASLSSETRQGRSEKRVFPRKRDFTSEGAAVGSILDVSASPLSPHRRAKSLDRRSTESSMTPDLLNFKKGWLTKQYEDGQWKKHWFVLTDQSLRYYRDSVAEEAADLDGEIDLSTCYDVTEYPVQRNYGFQIHTKEGEFTLSAMTSGIRRNWIQTIMKHVRPTTAPDVTSSLPEEKSKTSSSFETAPKPSEKPDAEQAELDPEQKRSRARERRREGRSKTFDWAEFRPIQQALAQERANAADSSRNTSATFSRDTGATDADSGELERERARRREERRKRFEMIDTVDGAGTEEALRMEVDRILPVPGDIKPQNVHVEIEQRWHQVETTPLREEKQIPITPLHLAHAEEREEGLAKQHLTTLLEKELEQKQKEALDLLEQNRHLQDQLKVALGREQSAREGYVLQTEVAASPSGAWQRLHKVNQDLQSELEAQCQRQELINQQIQSLKRSYAEAKDVIRHHEAEIQSLQARLSNAAAELSIKEQTLAKLKNDLRSEKVKAKEQLEEWQHGEAALSSQLKASEQKLKNAEALLLEKTQELRNLEMQQALQRDHQKEVQRLQDRIADLGRQLNASEQTRILMEEKLQKNYEALLESCEREKQVLLRSLKEVEDKANEYENQLQNNEQQMEILQKEKLSAKFEGSELVHQLEEQLVMKEASIQKLAEHIKELERERDQIKCRFHELMNQVAESDNEVAKLQAKLKMEEANYHNLEQSFEEVSDQFQGVQKVLKEKEEELRHVKEMHLRIVEKKDQDLSEALVKMVALDSSLEEAKVKLKAKEEALKKLSCAGTGPCAEEAEDLGLNLEADENQLGQPLQTQDVLPALTYALKEEEEEEEEVLEPSQRQAEEFGSPSKGVELQDQELVQKALAKPDVGIMGAKRQRIRFSSIQCQKYIHPDGSEKNWTSSTSSDTSQDRSLSEESMSSEPAPGYPSTGTSDSETYLSIIHSLETKLYITEEKLKDVTMKLESQHGHNQETLIALHHQWASTESQLREQLQTSLSQVSALISQLESERQEKFKLIENHVSELGGFQMKNDQALTCLEKCREQLRSLPKSDEEKEGDLFLVTLSSMETTLSNAIQALRGAPDPSEYQQSESLISESPTPEGGFLGEEEHVSKEQQAEGFDAGQLRWLSERVAFEASLINQIAESLKNASSEISQLLREIQGTAEMALLEPANVSPTAVDLASVLSKKLLLEGEFWSQVEELRVHLSTREGEAEGKTETTGLGFSPCFLSTVADATLIKAELGFVAQKMRESFHQRLKTIEEDLHNTKTALQQHKCMLEEIIKVYRTPDFDRVMHQISEALEIQKDASERTQISWDRSHLQVVPGQELAKTEEIGSLPDSSSEALVSIQEDLAQQLKDKSNVLKEISVALLSLPPEEAMRDCQKLLKISQSLSYHACMGDLERYSSLLVQDAIIQAQVCYAACKVRLEYERELKSYRESLQSMDVLCQERVKTVSLLRDEYEELLRKQQGEYGEVIAMLERENADLKAKVSQLESQRRLLEEEEHKHSKSLSELQGRYEEEIRNVIEQLNRTEDALKAERTEGLNQLDAIVRDKQNMEQYHLEQMQMLEDKFQAKIKELQVIHGEELQALQEHYSQNLQHLQETLDEYQRQHPEVSPAAGPGGGDTWVADEADGTGQGPGGDLDSMHGLRERIQELEAQMNVMRDELENKHLEGNASTLREK…
SIO_010081: MPRIP
subclass of: SO_0000673
so part of: MPRIP
location: join(469264..469383,480219..480296,482292..482357,500760..500911,503396..503480,507643..507853,508849..509008,515110..515251,515759..515875,517883..517939,519291..519359,519617..519706,519974..520083,524238..524823,525752..525868,528887..532753,535665..535812,536459..536576,537431..537590,537683..537802,538303..538389,539048..539210,539654..539739,540902..540934)
location: region:469264-540934:1
so has part: feature:469264-469383:1:exon
so has part: feature:480219-480296:1:exon
so has part: feature:482292-482357:1:exon
so has part: feature:500760-500911:1:exon
so has part: feature:503396-503480:1:exon
so has part: feature:507643-507853:1:exon
so has part: feature:508849-509008:1:exon
so has part: feature:515110-515251:1:exon
so has part: feature:515759-515875:1:exon
so has part: feature:517883-517939:1:exon
so has part: feature:519291-519359:1:exon
so has part: feature:519617-519706:1:exon
so has part: feature:519974-520083:1:exon
so has part: feature:524238-524823:1:exon
so has part: feature:525752-525868:1:exon
so has part: feature:528887-532753:1:exon
so has part: feature:535665-535812:1:exon
so has part: feature:536459-536576:1:exon
so has part: feature:537431-537590:1:exon
so has part: feature:537683-537802:1:exon
so has part: feature:538303-538389:1:exon
so has part: feature:539048-539210:1:exon
so has part: feature:539654-539739:1:exon
so has part: feature:540902-540934:1:exon

XP_030315828.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469264-469383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:480219-480296:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:482292-482357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:500760-500911:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:503396-503480:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:507643-507853:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:508849-509008:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:515110-515251:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:515759-515875:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:517883-517939:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:519291-519359:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:519617-519706:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:519974-520083:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:524238-524823:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:525752-525868:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:528887-532753:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:535665-535812:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:536459-536576:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:537431-537590:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:537683-537802:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:538303-538389:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539048-539210:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:539654-539739:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:540902-540934:1:exon

MPRIP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MPRIP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin phosphatase Rho-interacting protein isoform X7
translation: MAAKDNPCRKFQANIFNKSKCQNCFKPRESHLLNDEDLNQAKPIYGGWLLLAPEGTDFDNPVHRSRKWQRRFFILYEHGLLRYALDEMPTTLPQGTINMNQCTDVVDGESRTGQKFSLCILTPEKEHFIRAENKEIISGWLEMLIVYPRTNKQNQKKKRKVEPPTPQEPGPAKMAVTSSNIPSAEKVPATKSTLWQEEMRGKDQADGGSGISSTQSPVQGQAGSASSLKDPVLDSKEEESSMNGDRIDCGRKTRVESGYFSLEKTKQDSKLEEQQLPPPPSPPSPSTPNNRRSQVIEKFEALDIENAEHMETNTSGGASLSSETRQGRSEKRVFPRKRDFTSEGAAVGSILDVSASPLSPHRRAKSLDRRSTESSMTPDLLNFKKGWLTKQYEDGQWKKHWFVLTDQSLRYYRDSVAEEAADLDGEIDLSTCYDVTEYPVQRNYGFQIHTKEGEFTLSAMTSGIRRNWIQTIMKHVRPTTAPDVTSSLPEEKSKTSSSFETAPKPSEKPDAEQAELDPEQKRSRARERRREGRSKTFDWAEFRPIQQALAQERANAADSSRNTSATFSRDTGATDADSGELERERARRREERRKRFEMIDTVDGAGTEEALRMEVDRILPVPGDIKPQNVHVEIEQRWHQVETTPLREEKQIPITPLHLAHAEEREEGLAKQHLTTLLEKELEQKQKEALDLLEQNRHLQDQLKVALGREQSAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATISAIEAMKNAHREELERELEKSQRSQISSVNADIEALRRQYLEELQSVQRELEVLSEQYSQKCLENAHLAQALEAERQALRQCQRENQELNAHNQELNNRLAAEITRLRTLLTGEGGGEAAGSPLTQGKDAYELEVLLRVKESEIQYLKQEISSLKDELQTALRDKKYASDKYKDIYTELSIVKAKADCDISRLKEQLKAATEAQGEKSPVNTTVSGYDIMKSKSNPDFLKKDRSSVSRQLRNIRSKSVIEQVSWDN
SIO_010081: MPRIP
subclass of: SO_0000673
so part of: MPRIP
location: join(469264..469383,480219..480296,482292..482357,500760..500911,503396..503480,507643..507853,508849..509008,515110..515251,515759..515875,517883..517939,519291..519359,519617..519706,519974..520083,524238..524823,525752..525868,535665..535812,536459..536576,537431..537590,537683..537802,538303..538389,539048..539210,539654..539739,540902..540934)
location: region:469264-540934:1
so has part: feature:469264-469383:1:exon
so has part: feature:480219-480296:1:exon
so has part: feature:482292-482357:1:exon
so has part: feature:500760-500911:1:exon
so has part: feature:503396-503480:1:exon
so has part: feature:507643-507853:1:exon
so has part: feature:508849-509008:1:exon
so has part: feature:515110-515251:1:exon
so has part: feature:515759-515875:1:exon
so has part: feature:517883-517939:1:exon
so has part: feature:519291-519359:1:exon
so has part: feature:519617-519706:1:exon
so has part: feature:519974-520083:1:exon
so has part: feature:524238-524823:1:exon
so has part: feature:525752-525868:1:exon
so has part: feature:535665-535812:1:exon
so has part: feature:536459-536576:1:exon
so has part: feature:537431-537590:1:exon
so has part: feature:537683-537802:1:exon
so has part: feature:538303-538389:1:exon
so has part: feature:539048-539210:1:exon
so has part: feature:539654-539739:1:exon
so has part: feature:540902-540934:1:exon

XP_030315830.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469264-469383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:480219-480296:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:482292-482357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:500760-500911:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:503396-503480:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:507643-507853:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:508849-509008:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:515110-515251:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:515759-515875:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:517883-517939:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:519291-519359:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:519617-519706:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:519974-520083:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:524238-524823:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:525752-525868:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:535665-535812:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:536459-536576:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:537431-537590:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:537683-537802:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:538303-538389:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:539048-539210:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:539654-539739:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:540902-540934:1:exon

PLD6
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PLD6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(550603..552543)
location: region:550603-552543:-1
so has part: feature:550603-552543:-1:exon
subclass of: SO_0000010

115599172
type: Gene
SIO_000068: ncbigene

position:550603:-1
position: 550603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552543:-1
position: 552543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550603-552543:-1:exon

PLD6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PLD6
product: phospholipase D family member 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030459985.1
SIO_010081: PLD6
subclass of: SO_0000673
so part of: PLD6
location: complement(join(550603..551605,552117..552543))
location: region:550603-552543:-1
so has part: feature:552117-552543:-1:exon
so has part: feature:550603-551605:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:552117-552543:-1:exon

position:552117:-1
position: 552117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:550603-551605:-1:exon

position:551605:-1
position: 551605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLD6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PLD6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial cardiolipin hydrolase
translation: MGAAGGPGRAGVALGLALGSAGLVLVLALAAWRRRRRPMREVLFFPSLPSCTEGLLAQAAGPEAAARPCPCPLPQRDCSLSRLLRLLLSARRSLDLCLFSFSNPQLGRAVQLLHRRGVRVRVITDEQYMGLRGSQIGFLRHAGIQVRHDQDTGYMHHKFAIVDQRILITGSLNWTTQAIQNNRENLLVMEDAEYVKPFLDEFERIWEEYNPINYKFFSRDSK
SIO_010081: PLD6
subclass of: SO_0000673
so part of: PLD6
location: complement(join(551364..551605,552117..552543))
location: region:551364-552543:-1
so has part: feature:552117-552543:-1:exon
so has part: feature:551364-551605:-1:exon

XP_030315845.1
type: Protein
SIO_000068: ncbiprotein

position:551364:-1
position: 551364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552117-552543:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551364-551605:-1:exon

FLCN
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: FLCN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(555057..565897)
location: region:555057-565897:-1
so has part: feature:555057-565897:-1:exon
subclass of: SO_0000010

103533067
type: Gene
SIO_000068: ncbigene

position:555057:-1
position: 555057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565897:-1
position: 565897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555057-565897:-1:exon

FLCN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FLCN
product: folliculin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs, 2 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030459785.1
SIO_010081: FLCN
subclass of: SO_0000673
so part of: FLCN
location: complement(join(555057..556477,557276..557381,558729..558860,559205..559328,559727..559840,560739..560929,561607..561698,562459..562619,563080..563301,563977..564123,564622..564900,565415..565505))
location: region:555057-565505:-1
so has part: feature:565415-565505:-1:exon
so has part: feature:564622-564900:-1:exon
so has part: feature:563977-564123:-1:exon
so has part: feature:563080-563301:-1:exon
so has part: feature:562459-562619:-1:exon
so has part: feature:561607-561698:-1:exon
so has part: feature:560739-560929:-1:exon
so has part: feature:559727-559840:-1:exon
so has part: feature:559205-559328:-1:exon
so has part: feature:558729-558860:-1:exon
so has part: feature:557276-557381:-1:exon
so has part: feature:555057-556477:-1:exon

position:565505:-1
position: 565505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565415-565505:-1:exon

position:565415:-1
position: 565415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:564622-564900:-1:exon

position:564622:-1
position: 564622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564900:-1
position: 564900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:563977-564123:-1:exon

position:563977:-1
position: 563977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564123:-1
position: 564123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:563080-563301:-1:exon

position:563080:-1
position: 563080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563301:-1
position: 563301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:562459-562619:-1:exon

position:562459:-1
position: 562459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562619:-1
position: 562619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:561607-561698:-1:exon

position:561607:-1
position: 561607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:561698:-1
position: 561698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:560739-560929:-1:exon

position:560739:-1
position: 560739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560929:-1
position: 560929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:559727-559840:-1:exon

position:559727:-1
position: 559727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559840:-1
position: 559840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:559205-559328:-1:exon

position:559205:-1
position: 559205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559328:-1
position: 559328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:558729-558860:-1:exon

position:558729:-1
position: 558729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558860:-1
position: 558860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:557276-557381:-1:exon

position:557276:-1
position: 557276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:557381:-1
position: 557381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:555057-556477:-1:exon

position:556477:-1
position: 556477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FLCN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FLCN
product: folliculin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs, 17 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030459786.1
SIO_010081: FLCN
subclass of: SO_0000673
so part of: FLCN
location: complement(join(556071..556477,557276..557381,558729..558860,559205..559328,559727..559840,560739..560929,561607..561698,562459..562619,563080..563301,563977..564123,564622..564900,565745..565897))
location: region:556071-565897:-1
so has part: feature:565745-565897:-1:exon
so has part: feature:564622-564900:-1:exon
so has part: feature:563977-564123:-1:exon
so has part: feature:563080-563301:-1:exon
so has part: feature:562459-562619:-1:exon
so has part: feature:561607-561698:-1:exon
so has part: feature:560739-560929:-1:exon
so has part: feature:559727-559840:-1:exon
so has part: feature:559205-559328:-1:exon
so has part: feature:558729-558860:-1:exon
so has part: feature:557276-557381:-1:exon
so has part: feature:556071-556477:-1:exon

position:556071:-1
position: 556071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565745-565897:-1:exon

position:565745:-1
position: 565745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:564622-564900:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:563977-564123:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:563080-563301:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:562459-562619:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:561607-561698:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:560739-560929:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:559727-559840:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:559205-559328:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:558729-558860:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:557276-557381:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:556071-556477:-1:exon

FLCN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FLCN
product: folliculin, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs, 17 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030459787.1
SIO_010081: FLCN
subclass of: SO_0000673
so part of: FLCN
location: complement(join(556071..556477,557276..557381,558729..558860,559205..559328,559727..559840,560739..560929,561607..561698,562459..562619,563080..563301,563977..564123,564622..564900,565624..565708))
location: region:556071-565708:-1
so has part: feature:565624-565708:-1:exon
so has part: feature:564622-564900:-1:exon
so has part: feature:563977-564123:-1:exon
so has part: feature:563080-563301:-1:exon
so has part: feature:562459-562619:-1:exon
so has part: feature:561607-561698:-1:exon
so has part: feature:560739-560929:-1:exon
so has part: feature:559727-559840:-1:exon
so has part: feature:559205-559328:-1:exon
so has part: feature:558729-558860:-1:exon
so has part: feature:557276-557381:-1:exon
so has part: feature:556071-556477:-1:exon

position:565708:-1
position: 565708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565624-565708:-1:exon

position:565624:-1
position: 565624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:564622-564900:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:563977-564123:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:563080-563301:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:562459-562619:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:561607-561698:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:560739-560929:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:559727-559840:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:559205-559328:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:558729-558860:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:557276-557381:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:556071-556477:-1:exon

FLCN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FLCN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: folliculin
translation: MNAIVALCHFCELHGPRTLFCTEVLHSPLPQGASSGDISGQNEQAEEEEGGIQMSSRIRSHSPAEGASADSSSPGPKKSDMCEGCRSLAGGHPGYVSHDKETSIKYVSHQHPNHPQLFSIVRQACVRSLSCEVCPGREGPIFFGDEQHGFVFSHTFFIKDSLARGFQRWYSIITIMMDRIYLINSWPFLLGKIRGIIDELQGKALKVFEAEQYGCPQRAQRMNTAFTPFLHQRNGNAARSLTSLTNDENLWACLHTSFAWLLKACGSRLTEKLLEGAPTEDTLVQMEKLADLKEESEGWDGSEEEVKPSSQPDVVEGQELSKCSPETSLMPDCNSWNVAHRRLSVFRSLRHMRQVLGASAFRMLAWHVLMGNQVIWKARDMDLVQSAFDVLRTMLPVGCVRIIPYSEQYEEAYRCNFLGLSPHVQIPSHILSSEFAVLVEVRAAARSSLYPTLFDDEQSLNKYEFVVTSGSPVAADRVGPTILNKIEAALTNQNLSVDVVDQCLVCLKEEWMNKVKVLFKFTKVDSRPKEDTQKLLSILGAAEEDNVKLLKFWMTGLSKTYKSHLMSTVRSPTSSESRN
SIO_010081: FLCN
subclass of: SO_0000673
so part of: FLCN
location: complement(join(556276..556477,557276..557381,558729..558860,559205..559328,559727..559840,560739..560929,561607..561698,562459..562619,563080..563301,563977..564123,564622..564870))
location: region:556276-564870:-1
so has part: feature:564622-564870:-1:exon
so has part: feature:563977-564123:-1:exon
so has part: feature:563080-563301:-1:exon
so has part: feature:562459-562619:-1:exon
so has part: feature:561607-561698:-1:exon
so has part: feature:560739-560929:-1:exon
so has part: feature:559727-559840:-1:exon
so has part: feature:559205-559328:-1:exon
so has part: feature:558729-558860:-1:exon
so has part: feature:557276-557381:-1:exon
so has part: feature:556276-556477:-1:exon

XP_030315645.1
type: Protein
SIO_000068: ncbiprotein

position:556276:-1
position: 556276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564870:-1
position: 564870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:564622-564870:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:563977-564123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:563080-563301:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:562459-562619:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:561607-561698:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:560739-560929:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:559727-559840:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:559205-559328:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:558729-558860:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:557276-557381:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:556276-556477:-1:exon

FLCN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FLCN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: folliculin
translation: MNAIVALCHFCELHGPRTLFCTEVLHSPLPQGASSGDISGQNEQAEEEEGGIQMSSRIRSHSPAEGASADSSSPGPKKSDMCEGCRSLAGGHPGYVSHDKETSIKYVSHQHPNHPQLFSIVRQACVRSLSCEVCPGREGPIFFGDEQHGFVFSHTFFIKDSLARGFQRWYSIITIMMDRIYLINSWPFLLGKIRGIIDELQGKALKVFEAEQYGCPQRAQRMNTAFTPFLHQRNGNAARSLTSLTNDENLWACLHTSFAWLLKACGSRLTEKLLEGAPTEDTLVQMEKLADLKEESEGWDGSEEEVKPSSQPDVVEGQELSKCSPETSLMPDCNSWNVAHRRLSVFRSLRHMRQVLGASAFRMLAWHVLMGNQVIWKARDMDLVQSAFDVLRTMLPVGCVRIIPYSEQYEEAYRCNFLGLSPHVQIPSHILSSEFAVLVEVRAAARSSLYPTLFDDEQSLNKYEFVVTSGSPVAADRVGPTILNKIEAALTNQNLSVDVVDQCLVCLKEEWMNKVKVLFKFTKVDSRPKEDTQKLLSILGAAEEDNVKLLKFWMTGLSKTYKSHLMSTVRSPTSSESRN
SIO_010081: FLCN
subclass of: SO_0000673
so part of: FLCN
location: complement(join(556276..556477,557276..557381,558729..558860,559205..559328,559727..559840,560739..560929,561607..561698,562459..562619,563080..563301,563977..564123,564622..564870))
location: region:556276-564870:-1
so has part: feature:564622-564870:-1:exon
so has part: feature:563977-564123:-1:exon
so has part: feature:563080-563301:-1:exon
so has part: feature:562459-562619:-1:exon
so has part: feature:561607-561698:-1:exon
so has part: feature:560739-560929:-1:exon
so has part: feature:559727-559840:-1:exon
so has part: feature:559205-559328:-1:exon
so has part: feature:558729-558860:-1:exon
so has part: feature:557276-557381:-1:exon
so has part: feature:556276-556477:-1:exon

XP_030315646.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:564622-564870:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:563977-564123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:563080-563301:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:562459-562619:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:561607-561698:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:560739-560929:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:559727-559840:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:559205-559328:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:558729-558860:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:557276-557381:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:556276-556477:-1:exon

FLCN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FLCN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: folliculin
translation: MNAIVALCHFCELHGPRTLFCTEVLHSPLPQGASSGDISGQNEQAEEEEGGIQMSSRIRSHSPAEGASADSSSPGPKKSDMCEGCRSLAGGHPGYVSHDKETSIKYVSHQHPNHPQLFSIVRQACVRSLSCEVCPGREGPIFFGDEQHGFVFSHTFFIKDSLARGFQRWYSIITIMMDRIYLINSWPFLLGKIRGIIDELQGKALKVFEAEQYGCPQRAQRMNTAFTPFLHQRNGNAARSLTSLTNDENLWACLHTSFAWLLKACGSRLTEKLLEGAPTEDTLVQMEKLADLKEESEGWDGSEEEVKPSSQPDVVEGQELSKCSPETSLMPDCNSWNVAHRRLSVFRSLRHMRQVLGASAFRMLAWHVLMGNQVIWKARDMDLVQSAFDVLRTMLPVGCVRIIPYSEQYEEAYRCNFLGLSPHVQIPSHILSSEFAVLVEVRAAARSSLYPTLFDDEQSLNKYEFVVTSGSPVAADRVGPTILNKIEAALTNQNLSVDVVDQCLVCLKEEWMNKVKVLFKFTKVDSRPKEDTQKLLSILGAAEEDNVKLLKFWMTGLSKTYKSHLMSTVRSPTSSESRN
SIO_010081: FLCN
subclass of: SO_0000673
so part of: FLCN
location: complement(join(556276..556477,557276..557381,558729..558860,559205..559328,559727..559840,560739..560929,561607..561698,562459..562619,563080..563301,563977..564123,564622..564870))
location: region:556276-564870:-1
so has part: feature:564622-564870:-1:exon
so has part: feature:563977-564123:-1:exon
so has part: feature:563080-563301:-1:exon
so has part: feature:562459-562619:-1:exon
so has part: feature:561607-561698:-1:exon
so has part: feature:560739-560929:-1:exon
so has part: feature:559727-559840:-1:exon
so has part: feature:559205-559328:-1:exon
so has part: feature:558729-558860:-1:exon
so has part: feature:557276-557381:-1:exon
so has part: feature:556276-556477:-1:exon

XP_030315647.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:564622-564870:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:563977-564123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:563080-563301:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:562459-562619:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:561607-561698:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:560739-560929:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:559727-559840:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:559205-559328:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:558729-558860:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:557276-557381:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:556276-556477:-1:exon

COPS3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: COPS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(568720..580164)
location: region:568720-580164:-1
so has part: feature:568720-580164:-1:exon
subclass of: SO_0000010

103533066
type: Gene
SIO_000068: ncbigene

position:568720:-1
position: 568720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580164:-1
position: 580164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:568720-580164:-1:exon

COPS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: COPS3
product: COP9 signalosome subunit 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030459790.1
SIO_010081: COPS3
subclass of: SO_0000673
so part of: COPS3
location: complement(join(568720..569749,569983..570063,570635..570748,571208..571294,572144..572317,573252..573392,574624..574803,575532..575692,576469..576518,576611..576723,577870..577999,580040..580164))
location: region:568720-580164:-1
so has part: feature:580040-580164:-1:exon
so has part: feature:577870-577999:-1:exon
so has part: feature:576611-576723:-1:exon
so has part: feature:576469-576518:-1:exon
so has part: feature:575532-575692:-1:exon
so has part: feature:574624-574803:-1:exon
so has part: feature:573252-573392:-1:exon
so has part: feature:572144-572317:-1:exon
so has part: feature:571208-571294:-1:exon
so has part: feature:570635-570748:-1:exon
so has part: feature:569983-570063:-1:exon
so has part: feature:568720-569749:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:580040-580164:-1:exon

position:580040:-1
position: 580040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:577870-577999:-1:exon

position:577870:-1
position: 577870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577999:-1
position: 577999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:576611-576723:-1:exon

position:576611:-1
position: 576611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576723:-1
position: 576723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:576469-576518:-1:exon

position:576469:-1
position: 576469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576518:-1
position: 576518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:575532-575692:-1:exon

position:575532:-1
position: 575532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575692:-1
position: 575692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:574624-574803:-1:exon

position:574624:-1
position: 574624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574803:-1
position: 574803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:573252-573392:-1:exon

position:573252:-1
position: 573252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:573392:-1
position: 573392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:572144-572317:-1:exon

position:572144:-1
position: 572144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572317:-1
position: 572317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:571208-571294:-1:exon

position:571208:-1
position: 571208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:571294:-1
position: 571294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:570635-570748:-1:exon

position:570635:-1
position: 570635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:570748:-1
position: 570748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:569983-570063:-1:exon

position:569983:-1
position: 569983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:570063:-1
position: 570063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:568720-569749:-1:exon

position:569749:-1
position: 569749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

COPS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: COPS3
product: COP9 signalosome subunit 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 43 ESTs, 3 long SRA reads, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030459788.1
SIO_010081: COPS3
subclass of: SO_0000673
so part of: COPS3
location: complement(join(568720..569749,569983..570063,570635..570748,571208..571294,572144..572317,573252..573392,574624..574803,575532..575624,576469..576518,576611..576723,577870..577999,580040..580161))
location: region:568720-580161:-1
so has part: feature:580040-580161:-1:exon
so has part: feature:577870-577999:-1:exon
so has part: feature:576611-576723:-1:exon
so has part: feature:576469-576518:-1:exon
so has part: feature:575532-575624:-1:exon
so has part: feature:574624-574803:-1:exon
so has part: feature:573252-573392:-1:exon
so has part: feature:572144-572317:-1:exon
so has part: feature:571208-571294:-1:exon
so has part: feature:570635-570748:-1:exon
so has part: feature:569983-570063:-1:exon
so has part: feature:568720-569749:-1:exon

position:580161:-1
position: 580161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580040-580161:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:577870-577999:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:576611-576723:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:576469-576518:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:575532-575624:-1:exon

position:575624:-1
position: 575624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:574624-574803:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:573252-573392:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:572144-572317:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:571208-571294:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:570635-570748:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:569983-570063:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:568720-569749:-1:exon

COPS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: COPS3
product: COP9 signalosome subunit 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030459789.1
SIO_010081: COPS3
subclass of: SO_0000673
so part of: COPS3
location: complement(join(568720..569749,569983..570063,570635..570748,571208..571294,572144..572317,574624..574803,575532..575624,576469..576518,576611..576723,577870..577999,580040..580160))
location: region:568720-580160:-1
so has part: feature:580040-580160:-1:exon
so has part: feature:577870-577999:-1:exon
so has part: feature:576611-576723:-1:exon
so has part: feature:576469-576518:-1:exon
so has part: feature:575532-575624:-1:exon
so has part: feature:574624-574803:-1:exon
so has part: feature:572144-572317:-1:exon
so has part: feature:571208-571294:-1:exon
so has part: feature:570635-570748:-1:exon
so has part: feature:569983-570063:-1:exon
so has part: feature:568720-569749:-1:exon

position:580160:-1
position: 580160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580040-580160:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:577870-577999:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:576611-576723:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:576469-576518:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:575532-575624:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:574624-574803:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:572144-572317:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:571208-571294:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:570635-570748:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:569983-570063:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:568720-569749:-1:exon

COPS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: COPS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COP9 signalosome complex subunit 3 isoform X2
translation: MASALEQFVNSVRQLSAQGQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLFVKFSMPSIPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGISILRQAIDKMQMNTNQLTSIHADLCQLCLLAKCFKPALPYLDVDMMDICKENGAYDAKHFLCYYYYGGMIYTGLKNFERALYFYEQPLSNAYHELAQVYSTNKPSELRNLVNKHSETFTRDNNMGLVKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKDGMVCFHDNPEKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQFVQKSMGSQEDDSGTKPSSYS
SIO_010081: COPS3
subclass of: SO_0000673
so part of: COPS3
location: complement(join(569696..569749,569983..570063,570635..570748,571208..571294,572144..572317,574624..574803,575532..575624,576469..576518,576611..576723,577870..577999,580040..580094))
location: region:569696-580094:-1
so has part: feature:580040-580094:-1:exon
so has part: feature:577870-577999:-1:exon
so has part: feature:576611-576723:-1:exon
so has part: feature:576469-576518:-1:exon
so has part: feature:575532-575624:-1:exon
so has part: feature:574624-574803:-1:exon
so has part: feature:572144-572317:-1:exon
so has part: feature:571208-571294:-1:exon
so has part: feature:570635-570748:-1:exon
so has part: feature:569983-570063:-1:exon
so has part: feature:569696-569749:-1:exon

XP_030315649.1
type: Protein
SIO_000068: ncbiprotein

position:569696:-1
position: 569696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580094:-1
position: 580094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580040-580094:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:577870-577999:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:576611-576723:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:576469-576518:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:575532-575624:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:574624-574803:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:572144-572317:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:571208-571294:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:570635-570748:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:569983-570063:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:569696-569749:-1:exon

COPS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: COPS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COP9 signalosome complex subunit 3 isoform X1
translation: MASALEQFVNSVRQLSAQGQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLFVKFSMPSIPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGISILRQAIDKMQMNTNQLTSIHADLCQLCLLAKCFKPALPYLDVDMMDICKENGAYDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILLGKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNKPSELRNLVNKHSETFTRDNNMGLVKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKDGMVCFHDNPEKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQFVQKSMGSQEDDSGTKPSSYS
SIO_010081: COPS3
subclass of: SO_0000673
so part of: COPS3
location: complement(join(569696..569749,569983..570063,570635..570748,571208..571294,572144..572317,573252..573392,574624..574803,575532..575624,576469..576518,576611..576723,577870..577999,580040..580094))
location: region:569696-580094:-1
so has part: feature:580040-580094:-1:exon
so has part: feature:577870-577999:-1:exon
so has part: feature:576611-576723:-1:exon
so has part: feature:576469-576518:-1:exon
so has part: feature:575532-575624:-1:exon
so has part: feature:574624-574803:-1:exon
so has part: feature:573252-573392:-1:exon
so has part: feature:572144-572317:-1:exon
so has part: feature:571208-571294:-1:exon
so has part: feature:570635-570748:-1:exon
so has part: feature:569983-570063:-1:exon
so has part: feature:569696-569749:-1:exon

XP_030315648.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:580040-580094:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:577870-577999:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:576611-576723:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:576469-576518:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:575532-575624:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:574624-574803:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:573252-573392:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:572144-572317:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:571208-571294:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:570635-570748:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:569983-570063:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:569696-569749:-1:exon

COPS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: COPS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COP9 signalosome complex subunit 3 isoform X3
translation: MQMNTNQLTSIHADLCQLCLLAKCFKPALPYLDVDMMDICKENGAYDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILLGKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNKPSELRNLVNKHSETFTRDNNMGLVKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKDGMVCFHDNPEKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQFVQKSMGSQEDDSGTKPSSYS
SIO_010081: COPS3
subclass of: SO_0000673
so part of: COPS3
location: complement(join(569696..569749,569983..570063,570635..570748,571208..571294,572144..572317,573252..573392,574624..574803,575532..575582))
location: region:569696-575582:-1
so has part: feature:575532-575582:-1:exon
so has part: feature:574624-574803:-1:exon
so has part: feature:573252-573392:-1:exon
so has part: feature:572144-572317:-1:exon
so has part: feature:571208-571294:-1:exon
so has part: feature:570635-570748:-1:exon
so has part: feature:569983-570063:-1:exon
so has part: feature:569696-569749:-1:exon

XP_030315650.1
type: Protein
SIO_000068: ncbiprotein

position:575582:-1
position: 575582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:575532-575582:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:574624-574803:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:573252-573392:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:572144-572317:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:571208-571294:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:570635-570748:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:569983-570063:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:569696-569749:-1:exon

NT5M
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: NT5M
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 581539..588088
location: region:581539-588088:1
so has part: feature:581539-588088:1:exon
subclass of: SO_0000010

103533100
type: Gene
SIO_000068: ncbigene

position:581539:1
position: 581539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:588088:1
position: 588088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581539-588088:1:exon

NT5M
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NT5M
product: 5',3'-nucleotidase, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030459792.1
SIO_010081: NT5M
subclass of: SO_0000673
so part of: NT5M
location: join(581539..582120,584318..584418,584844..584904,585405..585519,585719..588088)
location: region:581539-588088:1
so has part: feature:581539-582120:1:exon
so has part: feature:584318-584418:1:exon
so has part: feature:584844-584904:1:exon
so has part: feature:585405-585519:1:exon
so has part: feature:585719-588088:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:581539-582120:1:exon

position:582120:1
position: 582120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:584318-584418:1:exon

position:584318:1
position: 584318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584418:1
position: 584418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:584844-584904:1:exon

position:584844:1
position: 584844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584904:1
position: 584904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:585405-585519:1:exon

position:585405:1
position: 585405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585519:1
position: 585519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:585719-588088:1:exon

position:585719:1
position: 585719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NT5M
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NT5M
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5'(3')-deoxyribonucleotidase, mitochondrial
translation: MIFLSCFLHLRPRRCSPLAGLGRVGSPPAGSRRALRVLVDMDGVLADFEGGFLKKFRARYPDKPYIALEDRRGFWVSEQYGRLGPELREKAISIWESKNFFIELDPLPGAVEAVKQMANLADTDVFICTSPIKKYRYCPYEKYAWVEKHFGPEFLEQIVLTRDKTVVSADLLIDDRPDIVGAELNPTWEHVLFTACHNKHLQLKPPSRRLQSWTDDWKAILDSKRLPPSQDT
SIO_010081: NT5M
subclass of: SO_0000673
so part of: NT5M
location: join(581857..582120,584318..584418,584844..584904,585405..585519,585719..585876)
location: region:581857-585876:1
so has part: feature:581857-582120:1:exon
so has part: feature:584318-584418:1:exon
so has part: feature:584844-584904:1:exon
so has part: feature:585405-585519:1:exon
so has part: feature:585719-585876:1:exon

XP_030315652.1
type: Protein
SIO_000068: ncbiprotein

position:581857:1
position: 581857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585876:1
position: 585876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581857-582120:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:584318-584418:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:584844-584904:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:585405-585519:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:585719-585876:1:exon

LOC115599161
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599161
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(589812..608838)
location: region:589812-608838:-1
so has part: feature:589812-608838:-1:exon
subclass of: SO_0000011

115599161
type: Gene
SIO_000068: ncbigene

position:589812:-1
position: 589812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:608838:-1
position: 608838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:589812-608838:-1:exon

LOC115599161
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599161
product: uncharacterized LOC115599161, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988178.1
SIO_010081: LOC115599161
subclass of: SO_0000673
so part of: LOC115599161
location: complement(join(589812..590190,590502..590577,591150..591429,608426..608838))
location: region:589812-608838:-1
so has part: feature:608426-608838:-1:exon
so has part: feature:591150-591429:-1:exon
so has part: feature:590502-590577:-1:exon
so has part: feature:589812-590190:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:608426-608838:-1:exon

position:608426:-1
position: 608426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:591150-591429:-1:exon

position:591150:-1
position: 591150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591429:-1
position: 591429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:590502-590577:-1:exon

position:590502:-1
position: 590502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590577:-1
position: 590577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:589812-590190:-1:exon

position:590190:-1
position: 590190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115599161
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599161
product: uncharacterized LOC115599161, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988177.1
SIO_010081: LOC115599161
subclass of: SO_0000673
so part of: LOC115599161
location: complement(join(589812..590577,591150..591429,608426..608838))
location: region:589812-608838:-1
so has part: feature:608426-608838:-1:exon
so has part: feature:591150-591429:-1:exon
so has part: feature:589812-590577:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:608426-608838:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:591150-591429:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:589812-590577:-1:exon

MED9
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: MED9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 609044..613408
location: region:609044-613408:1
so has part: feature:609044-613408:1:exon
subclass of: SO_0000010

103533065
type: Gene
SIO_000068: ncbigene

position:609044:1
position: 609044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:613408:1
position: 613408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609044-613408:1:exon

MED9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MED9
product: mediator complex subunit 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030459912.1
SIO_010081: MED9
subclass of: SO_0000673
so part of: MED9
location: join(609044..609222,612588..613408)
location: region:609044-613408:1
so has part: feature:609044-609222:1:exon
so has part: feature:612588-613408:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:609044-609222:1:exon

position:609222:1
position: 609222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:612588-613408:1:exon

position:612588:1
position: 612588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MED9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MED9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 9
translation: MASGAAAARPAEEPAAPEPPAEQKPPPLLPPPPPPPLPAQEEFSFLPLVHDIIKCMDKDSQDVHQVLNELKNKFQEMRKLISSMPGISVSPEQQQQQLQNLREQVRTKNELLQKYKSLCMFEIPKE
SIO_010081: MED9
subclass of: SO_0000673
so part of: MED9
location: join(609059..609222,612588..612804)
location: region:609059-612804:1
so has part: feature:609059-609222:1:exon
so has part: feature:612588-612804:1:exon

XP_030315772.1
type: Protein
SIO_000068: ncbiprotein

position:609059:1
position: 609059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:612804:1
position: 612804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609059-609222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:612588-612804:1:exon

RASD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: RASD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(615997..617254)
location: region:615997-617254:-1
so has part: feature:615997-617254:-1:exon
subclass of: SO_0000010

103533064
type: Gene
SIO_000068: ncbigene

position:615997:-1
position: 615997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617254:-1
position: 617254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615997-617254:-1:exon

RASD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RASD1
product: ras related dexamethasone induced 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 1 long SRA read, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_008498886.2
SIO_010081: RASD1
subclass of: SO_0000673
so part of: RASD1
location: complement(join(615997..616575,616869..617254))
location: region:615997-617254:-1
so has part: feature:616869-617254:-1:exon
so has part: feature:615997-616575:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:616869-617254:-1:exon

position:616869:-1
position: 616869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:615997-616575:-1:exon

position:616575:-1
position: 616575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RASD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RASD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dexamethasone-induced Ras-related protein 1
translation: MKLAAMIKKMCPSEAELSIPAKNCYRMVILGSSKVGKTAIVSRFLTGRFEEQYTPTIEDFHRKFYSIRGEVYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRDSFEEVQRLKQQILETKSCLKNKTKENIEVPLVICGNKGDRDFYREVQPREIEQLVGGDPKKCAYFEISAKKNSSLDQMFQALFAMAKLPSEMSPDLHRKVSVQYCDILHKKALKGKKLLKDGGRGSTEEAYGIVAPFARRPSVHSDLMYIRQKAIGGGHGKEKDRCVIS
SIO_010081: RASD1
subclass of: SO_0000673
so part of: RASD1
location: complement(join(616025..616575,616869..617154))
location: region:616025-617154:-1
so has part: feature:616869-617154:-1:exon
so has part: feature:616025-616575:-1:exon

XP_008497108.1
type: Protein
SIO_000068: ncbiprotein

position:616025:-1
position: 616025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617154:-1
position: 617154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:616869-617154:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:616025-616575:-1:exon

LOC115599191
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599191
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 621907..622344
location: region:621907-622344:1
so has part: feature:621907-622344:1:exon
subclass of: SO_0000011

115599191
type: Gene
SIO_000068: ncbigene

position:621907:1
position: 621907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622344:1
position: 622344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621907-622344:1:exon

LOC115599191
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599191
product: uncharacterized LOC115599191
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003988199.1
SIO_010081: LOC115599191
subclass of: SO_0000673
so part of: LOC115599191
location: join(621907..621998,622086..622344)
location: region:621907-622344:1
so has part: feature:621907-621998:1:exon
so has part: feature:622086-622344:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:621907-621998:1:exon

position:621998:1
position: 621998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:622086-622344:1:exon

position:622086:1
position: 622086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PEMT
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PEMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(625018..665348)
location: region:625018-665348:-1
so has part: feature:625018-665348:-1:exon
subclass of: SO_0000010

103533098
type: Gene
SIO_000068: ncbigene

position:625018:-1
position: 625018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665348:-1
position: 665348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:625018-665348:-1:exon

PEMT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PEMT
product: phosphatidylethanolamine N-methyltransferase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_030460233.1
SIO_010081: PEMT
subclass of: SO_0000673
so part of: PEMT
location: complement(join(625018..626391,627073..627133,627916..627990,631785..631896,635744..635889,643090..643205,662442..662549,664895..665072))
location: region:625018-665072:-1
so has part: feature:664895-665072:-1:exon
so has part: feature:662442-662549:-1:exon
so has part: feature:643090-643205:-1:exon
so has part: feature:635744-635889:-1:exon
so has part: feature:631785-631896:-1:exon
so has part: feature:627916-627990:-1:exon
so has part: feature:627073-627133:-1:exon
so has part: feature:625018-626391:-1:exon

position:665072:-1
position: 665072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:664895-665072:-1:exon

position:664895:-1
position: 664895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:662442-662549:-1:exon

position:662442:-1
position: 662442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:662549:-1
position: 662549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:643090-643205:-1:exon

position:643090:-1
position: 643090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:643205:-1
position: 643205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:635744-635889:-1:exon

position:635744:-1
position: 635744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:635889:-1
position: 635889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:631785-631896:-1:exon

position:631785:-1
position: 631785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:631896:-1
position: 631896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:627916-627990:-1:exon

position:627916:-1
position: 627916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:627990:-1
position: 627990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:627073-627133:-1:exon

position:627073:-1
position: 627073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:627133:-1
position: 627133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:625018-626391:-1:exon

position:626391:-1
position: 626391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PEMT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PEMT
product: phosphatidylethanolamine N-methyltransferase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030460234.1
SIO_010081: PEMT
subclass of: SO_0000673
so part of: PEMT
location: complement(join(625018..625716,627073..627133,627916..627990,631785..631896,635744..635889,643090..643205,662442..662549,664895..665046))
location: region:625018-665046:-1
so has part: feature:664895-665046:-1:exon
so has part: feature:662442-662549:-1:exon
so has part: feature:643090-643205:-1:exon
so has part: feature:635744-635889:-1:exon
so has part: feature:631785-631896:-1:exon
so has part: feature:627916-627990:-1:exon
so has part: feature:627073-627133:-1:exon
so has part: feature:625018-625716:-1:exon

position:665046:-1
position: 665046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:664895-665046:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:662442-662549:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:643090-643205:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635744-635889:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:631785-631896:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:627916-627990:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:627073-627133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:625018-625716:-1:exon

position:625716:-1
position: 625716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PEMT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PEMT
product: phosphatidylethanolamine N-methyltransferase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030460236.1
SIO_010081: PEMT
subclass of: SO_0000673
so part of: PEMT
location: complement(join(625018..626391,627073..627133,627916..627990,631785..631896,635744..635889,643090..643205,662442..662549,664729..664822))
location: region:625018-664822:-1
so has part: feature:664729-664822:-1:exon
so has part: feature:662442-662549:-1:exon
so has part: feature:643090-643205:-1:exon
so has part: feature:635744-635889:-1:exon
so has part: feature:631785-631896:-1:exon
so has part: feature:627916-627990:-1:exon
so has part: feature:627073-627133:-1:exon
so has part: feature:625018-626391:-1:exon

position:664822:-1
position: 664822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:664729-664822:-1:exon

position:664729:-1
position: 664729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:662442-662549:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:643090-643205:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635744-635889:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:631785-631896:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:627916-627990:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:627073-627133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:625018-626391:-1:exon

PEMT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PEMT
product: phosphatidylethanolamine N-methyltransferase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030460235.1
SIO_010081: PEMT
subclass of: SO_0000673
so part of: PEMT
location: complement(join(625020..626391,627073..627133,627916..627990,631785..631896,635744..635889,643090..643205,662442..662549,665251..665348))
location: region:625020-665348:-1
so has part: feature:665251-665348:-1:exon
so has part: feature:662442-662549:-1:exon
so has part: feature:643090-643205:-1:exon
so has part: feature:635744-635889:-1:exon
so has part: feature:631785-631896:-1:exon
so has part: feature:627916-627990:-1:exon
so has part: feature:627073-627133:-1:exon
so has part: feature:625020-626391:-1:exon

position:625020:-1
position: 625020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:665251-665348:-1:exon

position:665251:-1
position: 665251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:662442-662549:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:643090-643205:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635744-635889:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:631785-631896:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:627916-627990:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:627073-627133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:625020-626391:-1:exon

PEMT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PEMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylethanolamine N-methyltransferase isoform X1
translation: MAGPGSGKRAATAAGGERPFPRECCEGLGGLDYGQVDVTAMARLFGYVDVTDSGFIAAALSIAFNPLFWNVVARWEHKTQALSQIFGSPRAACYCLGAIILFLNGVRSHCFTEAMKSQPKLEGLDCHWAYYSGLAILAVGTLFVVSSFLALGFIGTFLGDYFGILMEAKVTSFPFNVLDNPMYWGSTAVYLGWSLMHASPAGLLLTAVVAISYTIAMLYEGPFTEEIYRQKQKGVKKK
SIO_010081: PEMT
subclass of: SO_0000673
so part of: PEMT
location: complement(join(627079..627133,627916..627990,631785..631896,635744..635889,643090..643205,662442..662549,664895..664999))
location: region:627079-664999:-1
so has part: feature:664895-664999:-1:exon
so has part: feature:662442-662549:-1:exon
so has part: feature:643090-643205:-1:exon
so has part: feature:635744-635889:-1:exon
so has part: feature:631785-631896:-1:exon
so has part: feature:627916-627990:-1:exon
so has part: feature:627079-627133:-1:exon

XP_030316093.1
type: Protein
SIO_000068: ncbiprotein

position:627079:-1
position: 627079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664999:-1
position: 664999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:664895-664999:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:662442-662549:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:643090-643205:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635744-635889:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:631785-631896:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:627916-627990:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:627079-627133:-1:exon

PEMT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PEMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylethanolamine N-methyltransferase isoform X1
translation: MAGPGSGKRAATAAGGERPFPRECCEGLGGLDYGQVDVTAMARLFGYVDVTDSGFIAAALSIAFNPLFWNVVARWEHKTQALSQIFGSPRAACYCLGAIILFLNGVRSHCFTEAMKSQPKLEGLDCHWAYYSGLAILAVGTLFVVSSFLALGFIGTFLGDYFGILMEAKVTSFPFNVLDNPMYWGSTAVYLGWSLMHASPAGLLLTAVVAISYTIAMLYEGPFTEEIYRQKQKGVKKK
SIO_010081: PEMT
subclass of: SO_0000673
so part of: PEMT
location: complement(join(627079..627133,627916..627990,631785..631896,635744..635889,643090..643205,662442..662549,664895..664999))
location: region:627079-664999:-1
so has part: feature:664895-664999:-1:exon
so has part: feature:662442-662549:-1:exon
so has part: feature:643090-643205:-1:exon
so has part: feature:635744-635889:-1:exon
so has part: feature:631785-631896:-1:exon
so has part: feature:627916-627990:-1:exon
so has part: feature:627079-627133:-1:exon

XP_030316094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:664895-664999:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:662442-662549:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:643090-643205:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635744-635889:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:631785-631896:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:627916-627990:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:627079-627133:-1:exon

PEMT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PEMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylethanolamine N-methyltransferase isoform X2
translation: MARLFGYVDVTDSGFIAAALSIAFNPLFWNVVARWEHKTQALSQIFGSPRAACYCLGAIILFLNGVRSHCFTEAMKSQPKLEGLDCHWAYYSGLAILAVGTLFVVSSFLALGFIGTFLGDYFGILMEAKVTSFPFNVLDNPMYWGSTAVYLGWSLMHASPAGLLLTAVVAISYTIAMLYEGPFTEEIYRQKQKGVKKK
SIO_010081: PEMT
subclass of: SO_0000673
so part of: PEMT
location: complement(join(627079..627133,627916..627990,631785..631896,635744..635889,643090..643205,662442..662534))
location: region:627079-662534:-1
so has part: feature:662442-662534:-1:exon
so has part: feature:643090-643205:-1:exon
so has part: feature:635744-635889:-1:exon
so has part: feature:631785-631896:-1:exon
so has part: feature:627916-627990:-1:exon
so has part: feature:627079-627133:-1:exon

XP_030316095.1
type: Protein
SIO_000068: ncbiprotein

position:662534:-1
position: 662534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662442-662534:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:643090-643205:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:635744-635889:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:631785-631896:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:627916-627990:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:627079-627133:-1:exon

PEMT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PEMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylethanolamine N-methyltransferase isoform X2
translation: MARLFGYVDVTDSGFIAAALSIAFNPLFWNVVARWEHKTQALSQIFGSPRAACYCLGAIILFLNGVRSHCFTEAMKSQPKLEGLDCHWAYYSGLAILAVGTLFVVSSFLALGFIGTFLGDYFGILMEAKVTSFPFNVLDNPMYWGSTAVYLGWSLMHASPAGLLLTAVVAISYTIAMLYEGPFTEEIYRQKQKGVKKK
SIO_010081: PEMT
subclass of: SO_0000673
so part of: PEMT
location: complement(join(627079..627133,627916..627990,631785..631896,635744..635889,643090..643205,662442..662534))
location: region:627079-662534:-1
so has part: feature:662442-662534:-1:exon
so has part: feature:643090-643205:-1:exon
so has part: feature:635744-635889:-1:exon
so has part: feature:631785-631896:-1:exon
so has part: feature:627916-627990:-1:exon
so has part: feature:627079-627133:-1:exon

XP_030316096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:662442-662534:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:643090-643205:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:635744-635889:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:631785-631896:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:627916-627990:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:627079-627133:-1:exon

LOC115599190
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599190
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 629862..647589
location: region:629862-647589:1
so has part: feature:629862-647589:1:exon
subclass of: SO_0000011

115599190
type: Gene
SIO_000068: ncbigene

position:629862:1
position: 629862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647589:1
position: 647589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:629862-647589:1:exon

LOC115599190
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599190
product: uncharacterized LOC115599190
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988198.1
SIO_010081: LOC115599190
subclass of: SO_0000673
so part of: LOC115599190
location: join(629862..629937,631084..631090,636066..636069,647579..647589)
location: region:629862-647589:1
so has part: feature:629862-629937:1:exon
so has part: feature:631084-631090:1:exon
so has part: feature:636066-636069:1:exon
so has part: feature:647579-647589:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:629862-629937:1:exon

position:629937:1
position: 629937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:631084-631090:1:exon

position:631084:1
position: 631084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631090:1
position: 631090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:636066-636069:1:exon

position:636066:1
position: 636066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636069:1
position: 636069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:647579-647589:1:exon

position:647579:1
position: 647579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAI1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: RAI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 685247..757289
location: region:685247-757289:1
so has part: feature:685247-757289:1:exon
subclass of: SO_0000010

103533097
type: Gene
SIO_000068: ncbigene

position:685247:1
position: 685247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757289:1
position: 757289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:685247-757289:1:exon

RAI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RAI1
product: retinoic acid induced 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030460157.1
SIO_010081: RAI1
subclass of: SO_0000673
so part of: RAI1
location: join(685247..685326,720794..720874,748294..753916,754935..755028,755386..755435,755800..757289)
location: region:685247-757289:1
so has part: feature:685247-685326:1:exon
so has part: feature:720794-720874:1:exon
so has part: feature:748294-753916:1:exon
so has part: feature:754935-755028:1:exon
so has part: feature:755386-755435:1:exon
so has part: feature:755800-757289:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:685247-685326:1:exon

position:685326:1
position: 685326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:720794-720874:1:exon

position:720794:1
position: 720794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720874:1
position: 720874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:748294-753916:1:exon

position:748294:1
position: 748294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753916:1
position: 753916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:754935-755028:1:exon

position:754935:1
position: 754935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:755028:1
position: 755028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:755386-755435:1:exon

position:755386:1
position: 755386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:755435:1
position: 755435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:755800-757289:1:exon

position:755800:1
position: 755800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RAI1
product: retinoic acid induced 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030460160.1
SIO_010081: RAI1
subclass of: SO_0000673
so part of: RAI1
location: join(685247..685326,720794..720874,748294..753916,754938..755028,755386..755435,755800..755998)
location: region:685247-755998:1
so has part: feature:685247-685326:1:exon
so has part: feature:720794-720874:1:exon
so has part: feature:748294-753916:1:exon
so has part: feature:754938-755028:1:exon
so has part: feature:755386-755435:1:exon
so has part: feature:755800-755998:1:exon

position:755998:1
position: 755998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:685247-685326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:720794-720874:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:748294-753916:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:754938-755028:1:exon

position:754938:1
position: 754938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:755386-755435:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:755800-755998:1:exon

RAI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RAI1
product: retinoic acid induced 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030460161.1
SIO_010081: RAI1
subclass of: SO_0000673
so part of: RAI1
location: join(685247..685326,720794..720874,748294..753403,753590..753916,754935..755028,755386..755435,755800..755998)
location: region:685247-755998:1
so has part: feature:685247-685326:1:exon
so has part: feature:720794-720874:1:exon
so has part: feature:748294-753403:1:exon
so has part: feature:753590-753916:1:exon
so has part: feature:754935-755028:1:exon
so has part: feature:755386-755435:1:exon
so has part: feature:755800-755998:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:685247-685326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:720794-720874:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:748294-753403:1:exon

position:753403:1
position: 753403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:753590-753916:1:exon

position:753590:1
position: 753590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:754935-755028:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:755386-755435:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:755800-755998:1:exon

RAI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RAI1
product: retinoic acid induced 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030460159.1
SIO_010081: RAI1
subclass of: SO_0000673
so part of: RAI1
location: join(685251..685326,748294..753916,754935..755028,755386..755435,755800..757289)
location: region:685251-757289:1
so has part: feature:685251-685326:1:exon
so has part: feature:748294-753916:1:exon
so has part: feature:754935-755028:1:exon
so has part: feature:755386-755435:1:exon
so has part: feature:755800-757289:1:exon

position:685251:1
position: 685251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:685251-685326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:748294-753916:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:754935-755028:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:755386-755435:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:755800-757289:1:exon

RAI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RAI1
product: retinoic acid induced 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030460158.1
SIO_010081: RAI1
subclass of: SO_0000673
so part of: RAI1
location: join(719314..719377,720794..720874,748294..753916,754935..755028,755386..755435,755800..757289)
location: region:719314-757289:1
so has part: feature:719314-719377:1:exon
so has part: feature:720794-720874:1:exon
so has part: feature:748294-753916:1:exon
so has part: feature:754935-755028:1:exon
so has part: feature:755386-755435:1:exon
so has part: feature:755800-757289:1:exon

position:719314:1
position: 719314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:719314-719377:1:exon

position:719377:1
position: 719377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:720794-720874:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:748294-753916:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:754935-755028:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:755386-755435:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:755800-757289:1:exon

RAI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RAI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinoic acid-induced protein 1 isoform X1
translation: MQSFRERCGFHGNQQSYQPTSQDASRLENYRHQSQAGPNCERQRLVAKEYYSQQQLPYPGYENSAVEKYHRGNKQLAGQQLQGRPAFSNYAVQENSPYPARYSGDESLQGWGSQAQALPGGVAKYEDSLMKKTAAAAALAGGRPYHEPATTPLPFRTHFQQQQQQQQQAPQQQPPALPYPKLQRQKLPNDVSSPMPFSQSPHFGQHSQSFPASSTYSSPPAHSYKSCTAPSGQPPLERPLSSAASLAPGPRVPNLHGYQPNRIGYEQPPQPPPQPPQPPPPPQPPQPPQAPQPPQSLQGRHHGPETLHYQNLAKYQHYNQPGQTYCQGDAPPVRTPEQYYQTFSPSASHSPARSVGRSPSYSSTPSPLMPNLENFQYSQQPLSTGTFPASITDHSHFMPLLNPSPTDGTSPDAQSGNCKNLQKEKLPENLLSDLSLQSLTALTSQVENISNTVQQLLLSKATVPQKKGIKTPSRTPEQLKGQHCSPESSTYSAEQVGTPLSDPLSTPQSVHAETQDTDYLSGSEDQLERSFLFCNQNRSPARVNSNSKAKPESVSTCSVTSPDDMSTKSDDSFQSIHASLPLETFTKYVTNERDCPRLLLSALSQEELASEIIVLQDAISEKADKAWANSPMLSKEATKSPFQMENHHPCLDSMVKGAWPSQGDSSTLTEPLKLDKASGASTGKDFGEEVYEGPQVEFAATETKDALKDATPLAFNSKSSIPAATSSAGAAGYSCYSNTTANSVGSENTMEHFEWPEESLGEACLRWKELQATDLPKGLFPSKLGGSCKEKKNACDLDLCDGEQPAKSEPAQDFSQQAMEEEEEETLTYDEATKADSERWLQDTRHCCSAGDFSEIPIISSPELKESDLEAEEYSSLCELPGSEQKSVTYDASSPKPTEMPPVLSSSEVPMSAEETVSTVEKESSAPTPRLSGQSIILLGPAVGTETKVKSWFKSSLPHIQAEDESGEGETSHPEVANAESAPLVMVKQPLAPESTLGKAEPVSRGKSLRNKRVHCRLPEEDGPGSAVPSPFSDLPAAGGMASACLRPDSQVEMPSKNAQSQTPRFPSEGLPARMCTRSFTALAEPRAPALLEGLKAPSHQEKLGKKPGCGVKQRVAFKARKRSGRSAPKVVQNAGDATLLVPGLVTVEEAAGPTPPEGDMVEAGERDQRSMILRSRTKTQEVFYTKRRRGKRAADVRLKNCKVPKKLISNNHLPPAFKLAAPGSPHKEGKVGARMKLPKAGPGVGGKISERSLHSLKRKSTFISPIPAKKRNLVLRSNSGGVKEEKQEATPSLFKKMPVAKKVKAKLPPKSSSEAIPKPPLPKEAPDVCIKITSRAAFQEATKTKVLPPRKGRGLKLEAIVQKITSPNLKKFACKPVATAAAATMATYGTTLGPAGAERERAVKHSGVAPGDMRLHKPVAAQKMPATPMAEQLCRNPNGRAPKGKLSGGKKVSAEGCQGEACASALGVQPGSTITAKSLGLLPKKRNRKGKAAALGMAKAPMGSTPLPTLPRERVAGAGGGGEEAAWEGKKPKSEEKEAGSGESPPEGRPTAGPARGPKPRANHSNYNGYSKRQRKRLAHGKAKAVPARCKSRGKRRRQQSQQAPLLQPAEPEIRLKYISCKRLRADSRAPHFAPYIHVERRGEFTTTCTVINSPLEEARLQRGPSGPAPPPQAALPASSTMHMGPVVSKALSAACLVCCLCRNPANYKDLGDLCGPYYPEDCLPKKKSRLKEKVRTEGPGEDAAPPVAASERAARGTEGGCSAGSKMARPEGSGEAAKQSSLRSSPRGMFRRLQSCYCCDERTEGEEVAEKPRRHECHKAESLPQEPAGDTQEHWLHEACAVWTAGVFLVAGKLYGLQEAVKAAADLKCSSCQQAGATVSCCQKGCPHTYHYTCAIDTGCLLTEESFSLKCPKHKRQPL
SIO_010081: RAI1
subclass of: SO_0000673
so part of: RAI1
location: join(748310..753916,754935..755028,755386..755435,755800..755814)
location: region:748310-755814:1
so has part: feature:748310-753916:1:exon
so has part: feature:754935-755028:1:exon
so has part: feature:755386-755435:1:exon
so has part: feature:755800-755814:1:exon

XP_030316017.1
type: Protein
SIO_000068: ncbiprotein

position:748310:1
position: 748310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:755814:1
position: 755814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:748310-753916:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:754935-755028:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:755386-755435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:755800-755814:1:exon

RAI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RAI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinoic acid-induced protein 1 isoform X1
translation: MQSFRERCGFHGNQQSYQPTSQDASRLENYRHQSQAGPNCERQRLVAKEYYSQQQLPYPGYENSAVEKYHRGNKQLAGQQLQGRPAFSNYAVQENSPYPARYSGDESLQGWGSQAQALPGGVAKYEDSLMKKTAAAAALAGGRPYHEPATTPLPFRTHFQQQQQQQQQAPQQQPPALPYPKLQRQKLPNDVSSPMPFSQSPHFGQHSQSFPASSTYSSPPAHSYKSCTAPSGQPPLERPLSSAASLAPGPRVPNLHGYQPNRIGYEQPPQPPPQPPQPPPPPQPPQPPQAPQPPQSLQGRHHGPETLHYQNLAKYQHYNQPGQTYCQGDAPPVRTPEQYYQTFSPSASHSPARSVGRSPSYSSTPSPLMPNLENFQYSQQPLSTGTFPASITDHSHFMPLLNPSPTDGTSPDAQSGNCKNLQKEKLPENLLSDLSLQSLTALTSQVENISNTVQQLLLSKATVPQKKGIKTPSRTPEQLKGQHCSPESSTYSAEQVGTPLSDPLSTPQSVHAETQDTDYLSGSEDQLERSFLFCNQNRSPARVNSNSKAKPESVSTCSVTSPDDMSTKSDDSFQSIHASLPLETFTKYVTNERDCPRLLLSALSQEELASEIIVLQDAISEKADKAWANSPMLSKEATKSPFQMENHHPCLDSMVKGAWPSQGDSSTLTEPLKLDKASGASTGKDFGEEVYEGPQVEFAATETKDALKDATPLAFNSKSSIPAATSSAGAAGYSCYSNTTANSVGSENTMEHFEWPEESLGEACLRWKELQATDLPKGLFPSKLGGSCKEKKNACDLDLCDGEQPAKSEPAQDFSQQAMEEEEEETLTYDEATKADSERWLQDTRHCCSAGDFSEIPIISSPELKESDLEAEEYSSLCELPGSEQKSVTYDASSPKPTEMPPVLSSSEVPMSAEETVSTVEKESSAPTPRLSGQSIILLGPAVGTETKVKSWFKSSLPHIQAEDESGEGETSHPEVANAESAPLVMVKQPLAPESTLGKAEPVSRGKSLRNKRVHCRLPEEDGPGSAVPSPFSDLPAAGGMASACLRPDSQVEMPSKNAQSQTPRFPSEGLPARMCTRSFTALAEPRAPALLEGLKAPSHQEKLGKKPGCGVKQRVAFKARKRSGRSAPKVVQNAGDATLLVPGLVTVEEAAGPTPPEGDMVEAGERDQRSMILRSRTKTQEVFYTKRRRGKRAADVRLKNCKVPKKLISNNHLPPAFKLAAPGSPHKEGKVGARMKLPKAGPGVGGKISERSLHSLKRKSTFISPIPAKKRNLVLRSNSGGVKEEKQEATPSLFKKMPVAKKVKAKLPPKSSSEAIPKPPLPKEAPDVCIKITSRAAFQEATKTKVLPPRKGRGLKLEAIVQKITSPNLKKFACKPVATAAAATMATYGTTLGPAGAERERAVKHSGVAPGDMRLHKPVAAQKMPATPMAEQLCRNPNGRAPKGKLSGGKKVSAEGCQGEACASALGVQPGSTITAKSLGLLPKKRNRKGKAAALGMAKAPMGSTPLPTLPRERVAGAGGGGEEAAWEGKKPKSEEKEAGSGESPPEGRPTAGPARGPKPRANHSNYNGYSKRQRKRLAHGKAKAVPARCKSRGKRRRQQSQQAPLLQPAEPEIRLKYISCKRLRADSRAPHFAPYIHVERRGEFTTTCTVINSPLEEARLQRGPSGPAPPPQAALPASSTMHMGPVVSKALSAACLVCCLCRNPANYKDLGDLCGPYYPEDCLPKKKSRLKEKVRTEGPGEDAAPPVAASERAARGTEGGCSAGSKMARPEGSGEAAKQSSLRSSPRGMFRRLQSCYCCDERTEGEEVAEKPRRHECHKAESLPQEPAGDTQEHWLHEACAVWTAGVFLVAGKLYGLQEAVKAAADLKCSSCQQAGATVSCCQKGCPHTYHYTCAIDTGCLLTEESFSLKCPKHKRQPL
SIO_010081: RAI1
subclass of: SO_0000673
so part of: RAI1
location: join(748310..753916,754935..755028,755386..755435,755800..755814)
location: region:748310-755814:1
so has part: feature:748310-753916:1:exon
so has part: feature:754935-755028:1:exon
so has part: feature:755386-755435:1:exon
so has part: feature:755800-755814:1:exon

XP_030316018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:748310-753916:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:754935-755028:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:755386-755435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:755800-755814:1:exon

RAI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RAI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinoic acid-induced protein 1 isoform X1
translation: MQSFRERCGFHGNQQSYQPTSQDASRLENYRHQSQAGPNCERQRLVAKEYYSQQQLPYPGYENSAVEKYHRGNKQLAGQQLQGRPAFSNYAVQENSPYPARYSGDESLQGWGSQAQALPGGVAKYEDSLMKKTAAAAALAGGRPYHEPATTPLPFRTHFQQQQQQQQQAPQQQPPALPYPKLQRQKLPNDVSSPMPFSQSPHFGQHSQSFPASSTYSSPPAHSYKSCTAPSGQPPLERPLSSAASLAPGPRVPNLHGYQPNRIGYEQPPQPPPQPPQPPPPPQPPQPPQAPQPPQSLQGRHHGPETLHYQNLAKYQHYNQPGQTYCQGDAPPVRTPEQYYQTFSPSASHSPARSVGRSPSYSSTPSPLMPNLENFQYSQQPLSTGTFPASITDHSHFMPLLNPSPTDGTSPDAQSGNCKNLQKEKLPENLLSDLSLQSLTALTSQVENISNTVQQLLLSKATVPQKKGIKTPSRTPEQLKGQHCSPESSTYSAEQVGTPLSDPLSTPQSVHAETQDTDYLSGSEDQLERSFLFCNQNRSPARVNSNSKAKPESVSTCSVTSPDDMSTKSDDSFQSIHASLPLETFTKYVTNERDCPRLLLSALSQEELASEIIVLQDAISEKADKAWANSPMLSKEATKSPFQMENHHPCLDSMVKGAWPSQGDSSTLTEPLKLDKASGASTGKDFGEEVYEGPQVEFAATETKDALKDATPLAFNSKSSIPAATSSAGAAGYSCYSNTTANSVGSENTMEHFEWPEESLGEACLRWKELQATDLPKGLFPSKLGGSCKEKKNACDLDLCDGEQPAKSEPAQDFSQQAMEEEEEETLTYDEATKADSERWLQDTRHCCSAGDFSEIPIISSPELKESDLEAEEYSSLCELPGSEQKSVTYDASSPKPTEMPPVLSSSEVPMSAEETVSTVEKESSAPTPRLSGQSIILLGPAVGTETKVKSWFKSSLPHIQAEDESGEGETSHPEVANAESAPLVMVKQPLAPESTLGKAEPVSRGKSLRNKRVHCRLPEEDGPGSAVPSPFSDLPAAGGMASACLRPDSQVEMPSKNAQSQTPRFPSEGLPARMCTRSFTALAEPRAPALLEGLKAPSHQEKLGKKPGCGVKQRVAFKARKRSGRSAPKVVQNAGDATLLVPGLVTVEEAAGPTPPEGDMVEAGERDQRSMILRSRTKTQEVFYTKRRRGKRAADVRLKNCKVPKKLISNNHLPPAFKLAAPGSPHKEGKVGARMKLPKAGPGVGGKISERSLHSLKRKSTFISPIPAKKRNLVLRSNSGGVKEEKQEATPSLFKKMPVAKKVKAKLPPKSSSEAIPKPPLPKEAPDVCIKITSRAAFQEATKTKVLPPRKGRGLKLEAIVQKITSPNLKKFACKPVATAAAATMATYGTTLGPAGAERERAVKHSGVAPGDMRLHKPVAAQKMPATPMAEQLCRNPNGRAPKGKLSGGKKVSAEGCQGEACASALGVQPGSTITAKSLGLLPKKRNRKGKAAALGMAKAPMGSTPLPTLPRERVAGAGGGGEEAAWEGKKPKSEEKEAGSGESPPEGRPTAGPARGPKPRANHSNYNGYSKRQRKRLAHGKAKAVPARCKSRGKRRRQQSQQAPLLQPAEPEIRLKYISCKRLRADSRAPHFAPYIHVERRGEFTTTCTVINSPLEEARLQRGPSGPAPPPQAALPASSTMHMGPVVSKALSAACLVCCLCRNPANYKDLGDLCGPYYPEDCLPKKKSRLKEKVRTEGPGEDAAPPVAASERAARGTEGGCSAGSKMARPEGSGEAAKQSSLRSSPRGMFRRLQSCYCCDERTEGEEVAEKPRRHECHKAESLPQEPAGDTQEHWLHEACAVWTAGVFLVAGKLYGLQEAVKAAADLKCSSCQQAGATVSCCQKGCPHTYHYTCAIDTGCLLTEESFSLKCPKHKRQPL
SIO_010081: RAI1
subclass of: SO_0000673
so part of: RAI1
location: join(748310..753916,754935..755028,755386..755435,755800..755814)
location: region:748310-755814:1
so has part: feature:748310-753916:1:exon
so has part: feature:754935-755028:1:exon
so has part: feature:755386-755435:1:exon
so has part: feature:755800-755814:1:exon

XP_030316019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:748310-753916:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:754935-755028:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:755386-755435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:755800-755814:1:exon

RAI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RAI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinoic acid-induced protein 1 isoform X2
translation: MQSFRERCGFHGNQQSYQPTSQDASRLENYRHQSQAGPNCERQRLVAKEYYSQQQLPYPGYENSAVEKYHRGNKQLAGQQLQGRPAFSNYAVQENSPYPARYSGDESLQGWGSQAQALPGGVAKYEDSLMKKTAAAAALAGGRPYHEPATTPLPFRTHFQQQQQQQQQAPQQQPPALPYPKLQRQKLPNDVSSPMPFSQSPHFGQHSQSFPASSTYSSPPAHSYKSCTAPSGQPPLERPLSSAASLAPGPRVPNLHGYQPNRIGYEQPPQPPPQPPQPPPPPQPPQPPQAPQPPQSLQGRHHGPETLHYQNLAKYQHYNQPGQTYCQGDAPPVRTPEQYYQTFSPSASHSPARSVGRSPSYSSTPSPLMPNLENFQYSQQPLSTGTFPASITDHSHFMPLLNPSPTDGTSPDAQSGNCKNLQKEKLPENLLSDLSLQSLTALTSQVENISNTVQQLLLSKATVPQKKGIKTPSRTPEQLKGQHCSPESSTYSAEQVGTPLSDPLSTPQSVHAETQDTDYLSGSEDQLERSFLFCNQNRSPARVNSNSKAKPESVSTCSVTSPDDMSTKSDDSFQSIHASLPLETFTKYVTNERDCPRLLLSALSQEELASEIIVLQDAISEKADKAWANSPMLSKEATKSPFQMENHHPCLDSMVKGAWPSQGDSSTLTEPLKLDKASGASTGKDFGEEVYEGPQVEFAATETKDALKDATPLAFNSKSSIPAATSSAGAAGYSCYSNTTANSVGSENTMEHFEWPEESLGEACLRWKELQATDLPKGLFPSKLGGSCKEKKNACDLDLCDGEQPAKSEPAQDFSQQAMEEEEEETLTYDEATKADSERWLQDTRHCCSAGDFSEIPIISSPELKESDLEAEEYSSLCELPGSEQKSVTYDASSPKPTEMPPVLSSSEVPMSAEETVSTVEKESSAPTPRLSGQSIILLGPAVGTETKVKSWFKSSLPHIQAEDESGEGETSHPEVANAESAPLVMVKQPLAPESTLGKAEPVSRGKSLRNKRVHCRLPEEDGPGSAVPSPFSDLPAAGGMASACLRPDSQVEMPSKNAQSQTPRFPSEGLPARMCTRSFTALAEPRAPALLEGLKAPSHQEKLGKKPGCGVKQRVAFKARKRSGRSAPKVVQNAGDATLLVPGLVTVEEAAGPTPPEGDMVEAGERDQRSMILRSRTKTQEVFYTKRRRGKRAADVRLKNCKVPKKLISNNHLPPAFKLAAPGSPHKEGKVGARMKLPKAGPGVGGKISERSLHSLKRKSTFISPIPAKKRNLVLRSNSGGVKEEKQEATPSLFKKMPVAKKVKAKLPPKSSSEAIPKPPLPKEAPDVCIKITSRAAFQEATKTKVLPPRKGRGLKLEAIVQKITSPNLKKFACKPVATAAAATMATYGTTLGPAGAERERAVKHSGVAPGDMRLHKPVAAQKMPATPMAEQLCRNPNGRAPKGKLSGGKKVSAEGCQGEACASALGVQPGSTITAKSLGLLPKKRNRKGKAAALGMAKAPMGSTPLPTLPRERVAGAGGGGEEAAWEGKKPKSEEKEAGSGESPPEGRPTAGPARGPKPRANHSNYNGYSKRQRKRLAHGKAKAVPARCKSRGKRRRQQSQQAPLLQPAEPEIRLKYISCKRLRADSRAPHFAPYIHVERRGEFTTTCTVINSPLEEARLQRGPSGPAPPPQAALPASSTMHMGPVVSKALSAACLVCCLCRNPANYKDLGDLCGPYYPEDCLPKKKSRLKEKVRTEGPGEDAAPPVAASERAARGTEGGCSAGSKMARPEGSGEAAKQSSLRSSPRGMFRRLQSCYCCDERTEGEEVAEKPRRHECHKAESLPQEPAGDTQEHWLHEACAVWTAGVFLVAGKLYGLQEAVKAAADLCSSCQQAGATVSCCQKGCPHTYHYTCAIDTGCLLTEESFSLKCPKHKRQPL
SIO_010081: RAI1
subclass of: SO_0000673
so part of: RAI1
location: join(748310..753916,754938..755028,755386..755435,755800..755814)
location: region:748310-755814:1
so has part: feature:748310-753916:1:exon
so has part: feature:754938-755028:1:exon
so has part: feature:755386-755435:1:exon
so has part: feature:755800-755814:1:exon

XP_030316020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:748310-753916:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:754938-755028:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:755386-755435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:755800-755814:1:exon

RAI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RAI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinoic acid-induced protein 1 isoform X3
translation: MQSFRERCGFHGNQQSYQPTSQDASRLENYRHQSQAGPNCERQRLVAKEYYSQQQLPYPGYENSAVEKYHRGNKQLAGQQLQGRPAFSNYAVQENSPYPARYSGDESLQGWGSQAQALPGGVAKYEDSLMKKTAAAAALAGGRPYHEPATTPLPFRTHFQQQQQQQQQAPQQQPPALPYPKLQRQKLPNDVSSPMPFSQSPHFGQHSQSFPASSTYSSPPAHSYKSCTAPSGQPPLERPLSSAASLAPGPRVPNLHGYQPNRIGYEQPPQPPPQPPQPPPPPQPPQPPQAPQPPQSLQGRHHGPETLHYQNLAKYQHYNQPGQTYCQGDAPPVRTPEQYYQTFSPSASHSPARSVGRSPSYSSTPSPLMPNLENFQYSQQPLSTGTFPASITDHSHFMPLLNPSPTDGTSPDAQSGNCKNLQKEKLPENLLSDLSLQSLTALTSQVENISNTVQQLLLSKATVPQKKGIKTPSRTPEQLKGQHCSPESSTYSAEQVGTPLSDPLSTPQSVHAETQDTDYLSGSEDQLERSFLFCNQNRSPARVNSNSKAKPESVSTCSVTSPDDMSTKSDDSFQSIHASLPLETFTKYVTNERDCPRLLLSALSQEELASEIIVLQDAISEKADKAWANSPMLSKEATKSPFQMENHHPCLDSMVKGAWPSQGDSSTLTEPLKLDKASGASTGKDFGEEVYEGPQVEFAATETKDALKDATPLAFNSKSSIPAATSSAGAAGYSCYSNTTANSVGSENTMEHFEWPEESLGEACLRWKELQATDLPKGLFPSKLGGSCKEKKNACDLDLCDGEQPAKSEPAQDFSQQAMEEEEEETLTYDEATKADSERWLQDTRHCCSAGDFSEIPIISSPELKESDLEAEEYSSLCELPGSEQKSVTYDASSPKPTEMPPVLSSSEVPMSAEETVSTVEKESSAPTPRLSGQSIILLGPAVGTETKVKSWFKSSLPHIQAEDESGEGETSHPEVANAESAPLVMVKQPLAPESTLGKAEPVSRGKSLRNKRVHCRLPEEDGPGSAVPSPFSDLPAAGGMASACLRPDSQVEMPSKNAQSQTPRFPSEGLPARMCTRSFTALAEPRAPALLEGLKAPSHQEKLGKKPGCGVKQRVAFKARKRSGRSAPKVVQNAGDATLLVPGLVTVEEAAGPTPPEGDMVEAGERDQRSMILRSRTKTQEVFYTKRRRGKRAADVRLKNCKVPKKLISNNHLPPAFKLAAPGSPHKEGKVGARMKLPKAGPGVGGKISERSLHSLKRKSTFISPIPAKKRNLVLRSNSGGVKEEKQEATPSLFKKMPVAKKVKAKLPPKSSSEAIPKPPLPKEAPDVCIKITSRAAFQEATKTKVLPPRKGRGLKLEAIVQKITSPNLKKFACKPVATAAAATMATYGTTLGPAGAERERAVKHSGVAPGDMRLHKPVAAQKMPATPMAEQLCRNPNGRAPKGKLSGGKKVSAEGCQGEACASALGVQPGSTITAKSLGLLPKKRNRKGKAAALGMAKAPMGSTPLPTLPRERVAGAGGGGEEAAWEGKKPKSEEKEAGSGESPPEGRPTAGPARGPKPRANHSNYNGYSKRQRKRLAHGKAKAVPARCKSRGKRRRQQSQQAPLLQPAEPEIRLKYISCKRLRADSRAPHFAPYIHVERRGEFTTTCTVINSPLEEARLQRGPSGPAPPPQAALPASSTMHMGPVVSKALSAACLGGCSAGSKMARPEGSGEAAKQSSLRSSPRGMFRRLQSCYCCDERTEGEEVAEKPRRHECHKAESLPQEPAGDTQEHWLHEACAVWTAGVFLVAGKLYGLQEAVKAAADLKCSSCQQAGATVSCCQKGCPHTYHYTCAIDTGCLLTEESFSLKCPKHKRQPL
SIO_010081: RAI1
subclass of: SO_0000673
so part of: RAI1
location: join(748310..753403,753590..753916,754935..755028,755386..755435,755800..755814)
location: region:748310-755814:1
so has part: feature:748310-753403:1:exon
so has part: feature:753590-753916:1:exon
so has part: feature:754935-755028:1:exon
so has part: feature:755386-755435:1:exon
so has part: feature:755800-755814:1:exon

XP_030316021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:748310-753403:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:753590-753916:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:754935-755028:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:755386-755435:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:755800-755814:1:exon

SREBF1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SREBF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(758038..769396)
location: region:758038-769396:-1
so has part: feature:758038-769396:-1:exon
subclass of: SO_0000010

103533096
type: Gene
SIO_000068: ncbigene

position:758038:-1
position: 758038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:769396:-1
position: 769396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:758038-769396:-1:exon

SREBF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SREBF1
product: sterol regulatory element binding transcription factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_030460163.1
SIO_010081: SREBF1
subclass of: SO_0000673
so part of: SREBF1
location: complement(join(758038..759158,759486..759597,759680..759865,760160..760310,760488..760620,760715..760824,761351..761459,761542..761710,761798..761964,762535..762796,763342..763526,764039..764246,764599..764810,764894..765008,765094..765312,765392..765532,765610..765773,765949..766350,769118..769396))
location: region:758038-769396:-1
so has part: feature:769118-769396:-1:exon
so has part: feature:765949-766350:-1:exon
so has part: feature:765610-765773:-1:exon
so has part: feature:765392-765532:-1:exon
so has part: feature:765094-765312:-1:exon
so has part: feature:764894-765008:-1:exon
so has part: feature:764599-764810:-1:exon
so has part: feature:764039-764246:-1:exon
so has part: feature:763342-763526:-1:exon
so has part: feature:762535-762796:-1:exon
so has part: feature:761798-761964:-1:exon
so has part: feature:761542-761710:-1:exon
so has part: feature:761351-761459:-1:exon
so has part: feature:760715-760824:-1:exon
so has part: feature:760488-760620:-1:exon
so has part: feature:760160-760310:-1:exon
so has part: feature:759680-759865:-1:exon
so has part: feature:759486-759597:-1:exon
so has part: feature:758038-759158:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:769118-769396:-1:exon

position:769118:-1
position: 769118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:765949-766350:-1:exon

position:765949:-1
position: 765949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:766350:-1
position: 766350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:765610-765773:-1:exon

position:765610:-1
position: 765610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:765773:-1
position: 765773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:765392-765532:-1:exon

position:765392:-1
position: 765392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:765532:-1
position: 765532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:765094-765312:-1:exon

position:765094:-1
position: 765094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:765312:-1
position: 765312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:764894-765008:-1:exon

position:764894:-1
position: 764894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:765008:-1
position: 765008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:764599-764810:-1:exon

position:764599:-1
position: 764599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:764810:-1
position: 764810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:764039-764246:-1:exon

position:764039:-1
position: 764039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:764246:-1
position: 764246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:763342-763526:-1:exon

position:763342:-1
position: 763342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763526:-1
position: 763526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:762535-762796:-1:exon

position:762535:-1
position: 762535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:762796:-1
position: 762796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:761798-761964:-1:exon

position:761798:-1
position: 761798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761964:-1
position: 761964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:761542-761710:-1:exon

position:761542:-1
position: 761542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761710:-1
position: 761710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:761351-761459:-1:exon

position:761351:-1
position: 761351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761459:-1
position: 761459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:760715-760824:-1:exon

position:760715:-1
position: 760715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:760824:-1
position: 760824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:760488-760620:-1:exon

position:760488:-1
position: 760488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:760620:-1
position: 760620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:760160-760310:-1:exon

position:760160:-1
position: 760160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:760310:-1
position: 760310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:759680-759865:-1:exon

position:759680:-1
position: 759680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759865:-1
position: 759865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:759486-759597:-1:exon

position:759486:-1
position: 759486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759597:-1
position: 759597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:758038-759158:-1:exon

position:759158:-1
position: 759158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SREBF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SREBF1
product: sterol regulatory element binding transcription factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_030460162.1
SIO_010081: SREBF1
subclass of: SO_0000673
so part of: SREBF1
location: complement(join(758038..759158,759486..759597,759680..759865,760160..760310,760488..760620,760715..760827,761351..761459,761542..761710,761798..761964,762535..762796,763342..763526,764039..764246,764599..764810,764894..765008,765094..765312,765392..765532,765610..765773,765949..766350,769118..769396))
location: region:758038-769396:-1
so has part: feature:769118-769396:-1:exon
so has part: feature:765949-766350:-1:exon
so has part: feature:765610-765773:-1:exon
so has part: feature:765392-765532:-1:exon
so has part: feature:765094-765312:-1:exon
so has part: feature:764894-765008:-1:exon
so has part: feature:764599-764810:-1:exon
so has part: feature:764039-764246:-1:exon
so has part: feature:763342-763526:-1:exon
so has part: feature:762535-762796:-1:exon
so has part: feature:761798-761964:-1:exon
so has part: feature:761542-761710:-1:exon
so has part: feature:761351-761459:-1:exon
so has part: feature:760715-760827:-1:exon
so has part: feature:760488-760620:-1:exon
so has part: feature:760160-760310:-1:exon
so has part: feature:759680-759865:-1:exon
so has part: feature:759486-759597:-1:exon
so has part: feature:758038-759158:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:769118-769396:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:765949-766350:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:765610-765773:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:765392-765532:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:765094-765312:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:764894-765008:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:764599-764810:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:764039-764246:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:763342-763526:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:762535-762796:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:761798-761964:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:761542-761710:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:761351-761459:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:760715-760827:-1:exon

position:760827:-1
position: 760827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:760488-760620:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:760160-760310:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:759680-759865:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:759486-759597:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:758038-759158:-1:exon

SREBF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SREBF1
product: sterol regulatory element binding transcription factor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030460165.1
SIO_010081: SREBF1
subclass of: SO_0000673
so part of: SREBF1
location: complement(join(758038..759158,759486..759597,759680..759865,760160..760310,760488..760620,760715..760827,761351..761459,761542..761710,761798..761964,762535..762796,763342..763526,764039..764246,764599..764810,764894..765008,765094..765312,765392..765532,765610..765773,765949..766350,767210..767267))
location: region:758038-767267:-1
so has part: feature:767210-767267:-1:exon
so has part: feature:765949-766350:-1:exon
so has part: feature:765610-765773:-1:exon
so has part: feature:765392-765532:-1:exon
so has part: feature:765094-765312:-1:exon
so has part: feature:764894-765008:-1:exon
so has part: feature:764599-764810:-1:exon
so has part: feature:764039-764246:-1:exon
so has part: feature:763342-763526:-1:exon
so has part: feature:762535-762796:-1:exon
so has part: feature:761798-761964:-1:exon
so has part: feature:761542-761710:-1:exon
so has part: feature:761351-761459:-1:exon
so has part: feature:760715-760827:-1:exon
so has part: feature:760488-760620:-1:exon
so has part: feature:760160-760310:-1:exon
so has part: feature:759680-759865:-1:exon
so has part: feature:759486-759597:-1:exon
so has part: feature:758038-759158:-1:exon

position:767267:-1
position: 767267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:767210-767267:-1:exon

position:767210:-1
position: 767210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:765949-766350:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:765610-765773:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:765392-765532:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:765094-765312:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:764894-765008:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:764599-764810:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:764039-764246:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:763342-763526:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:762535-762796:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:761798-761964:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:761542-761710:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:761351-761459:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:760715-760827:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:760488-760620:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:760160-760310:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:759680-759865:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:759486-759597:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:758038-759158:-1:exon

SREBF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SREBF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sterol regulatory element-binding protein 1 isoform X2
translation: MSTLAFDDAALEGLAPSLGLSGANDIDMALLSDIDDMLQLINTPDNDFSGLFDSSFSAPDSAVAPGLPPAPGTLGTYLGPSKPPPTSPTSGGVYPGPSGMATFTPQPPALLQPAPVPAPGVKEEPVAVASSQPQPQPGMMVASSFVPASPTGQFNPQPLVGYQNQHTFSAVQPGGAGQTLPSSLPTPQPGQPVTLPGPVQSVAPPQLLAPAAPQPVSSQIQPVPVLLQPHFIKADSLLLTAVKTDAGSAKTSTITSLATSASGSATPLQVPALVSGGTILATVPLVVDAEKLPINRLAPSGKAALVQSRGEKRTAHNAIEKRYRSSINDKIVELKDLVVGTEAKLNKSAILRKAIEYIRFLQQSNQKLKQENLTLKMAMQKNQSLKDLVSSCRGGSKAEAPTEVVKAEVMEMLTPPPSDVGSPSHSSPLSLSGGSSNSSSDSEPDSPLCDHGKVKQEHRPPPSPSSQGMLDRSRMALCAFVLLCLSFNPLSSLLRGSGASASVGSAGTAGPGRTIMAESGTVEEPWGWSQWLWPTLAFWVLNTGLVLGAVVRLFVCGEPVTRPHSEPSILFWRHRRQADLDLHRGDFAQGAQHLRTALGALGRPLPASHGDLACSLLWSLLRHLLQRLWVGRWLAARAGGLRPDPPTRDHVRQSARDAAMAYHRLHQLHLAGKQAGGHLLAINLALSAVNLAECAGDAVSVAALAEIYVAAALRVKASLHRCFHFLARPFLCSARRVALSHGGAVPPAMQWLCHPLGHRFFVDGDWAVKGVPRETIYSSTGNPVDPLAQVTQLFREHLLEKALCCVAMPEPGRPAAQGEGRFSDALEYLQLLNGCSDASSEPGPAPSISSGLAAITGTDPVSKWWASIITTVIHWLQGDEEGAERLYPLVETMPRALQSSERPLPRAALHSFRAVRAMLSKQDSLSHCEKASSCLRESLELGNPPKGNIDKAVQLLLCDLLLVTRTNLWQQQMTASQQRSCLYQASALELRGFQQDLSSLRRLAQTLRPAMRRVFLHEATARLMARASPTRTHQLLDRSLRRRGVQGSKTAGEPESHPTPREHAEALLLACCYLPPSFLSGPGQRVGMLAEAARTLEKLGDKRTLHDCQQMIIKLGSGTTVTSG
SIO_010081: SREBF1
subclass of: SO_0000673
so part of: SREBF1
location: complement(join(758935..759158,759486..759597,759680..759865,760160..760310,760488..760620,760715..760824,761351..761459,761542..761710,761798..761964,762535..762796,763342..763526,764039..764246,764599..764810,764894..765008,765094..765312,765392..765532,765610..765773,765949..766350,769118..769223))
location: region:758935-769223:-1
so has part: feature:769118-769223:-1:exon
so has part: feature:765949-766350:-1:exon
so has part: feature:765610-765773:-1:exon
so has part: feature:765392-765532:-1:exon
so has part: feature:765094-765312:-1:exon
so has part: feature:764894-765008:-1:exon
so has part: feature:764599-764810:-1:exon
so has part: feature:764039-764246:-1:exon
so has part: feature:763342-763526:-1:exon
so has part: feature:762535-762796:-1:exon
so has part: feature:761798-761964:-1:exon
so has part: feature:761542-761710:-1:exon
so has part: feature:761351-761459:-1:exon
so has part: feature:760715-760824:-1:exon
so has part: feature:760488-760620:-1:exon
so has part: feature:760160-760310:-1:exon
so has part: feature:759680-759865:-1:exon
so has part: feature:759486-759597:-1:exon
so has part: feature:758935-759158:-1:exon

XP_030316023.1
type: Protein
SIO_000068: ncbiprotein

position:758935:-1
position: 758935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:769223:-1
position: 769223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:769118-769223:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:765949-766350:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:765610-765773:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:765392-765532:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:765094-765312:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:764894-765008:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:764599-764810:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:764039-764246:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:763342-763526:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:762535-762796:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:761798-761964:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:761542-761710:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:761351-761459:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:760715-760824:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:760488-760620:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:760160-760310:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:759680-759865:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:759486-759597:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:758935-759158:-1:exon

SREBF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SREBF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sterol regulatory element-binding protein 1 isoform X1
translation: MSTLAFDDAALEGLAPSLGLSGANDIDMALLSDIDDMLQLINTPDNDFSGLFDSSFSAPDSAVAPGLPPAPGTLGTYLGPSKPPPTSPTSGGVYPGPSGMATFTPQPPALLQPAPVPAPGVKEEPVAVASSQPQPQPGMMVASSFVPASPTGQFNPQPLVGYQNQHTFSAVQPGGAGQTLPSSLPTPQPGQPVTLPGPVQSVAPPQLLAPAAPQPVSSQIQPVPVLLQPHFIKADSLLLTAVKTDAGSAKTSTITSLATSASGSATPLQVPALVSGGTILATVPLVVDAEKLPINRLAPSGKAALVQSRGEKRTAHNAIEKRYRSSINDKIVELKDLVVGTEAKLNKSAILRKAIEYIRFLQQSNQKLKQENLTLKMAMQKNQSLKDLVSSCRGGSKAEAPTEVVKAEVMEMLTPPPSDVGSPSHSSPLSLSGGSSNSSSDSEPDSPLCDHGKVKQEHRPPPSPSSQGMLDRSRMALCAFVLLCLSFNPLSSLLRGSGASASVGSAGTAGPGRTIMAESGTVEEPWGWSQWLWPTLAFWVLNTGLVLGAVVRLFVCGEPVTRPHSEPSILFWRHRRQADLDLHRGDFAQGAQHLRTALGALGRPLPASHGDLACSLLWSLLRHLLQRLWVGRWLAARAGGLRPDPPTRDHVRQSARDAAMAYHRLHQLHLAGKQAGGHLLAINLALSAVNLAECAGDAVSVAALAEIYVAAALRVKASLHRCFHFLARPFLCSARRVALSHGGAVPPAMQWLCHPLGHRFFVDGDWAVKGVPRETIYSSTGNPVDPLAQVTQLFREHLLEKALCCVAMPEPGRPAAQGEGRRFSDALEYLQLLNGCSDASSEPGPAPSISSGLAAITGTDPVSKWWASIITTVIHWLQGDEEGAERLYPLVETMPRALQSSERPLPRAALHSFRAVRAMLSKQDSLSHCEKASSCLRESLELGNPPKGNIDKAVQLLLCDLLLVTRTNLWQQQMTASQQRSCLYQASALELRGFQQDLSSLRRLAQTLRPAMRRVFLHEATARLMARASPTRTHQLLDRSLRRRGVQGSKTAGEPESHPTPREHAEALLLACCYLPPSFLSGPGQRVGMLAEAARTLEKLGDKRTLHDCQQMIIKLGSGTTVTSG
SIO_010081: SREBF1
subclass of: SO_0000673
so part of: SREBF1
location: complement(join(758935..759158,759486..759597,759680..759865,760160..760310,760488..760620,760715..760827,761351..761459,761542..761710,761798..761964,762535..762796,763342..763526,764039..764246,764599..764810,764894..765008,765094..765312,765392..765532,765610..765773,765949..766350,769118..769223))
location: region:758935-769223:-1
so has part: feature:769118-769223:-1:exon
so has part: feature:765949-766350:-1:exon
so has part: feature:765610-765773:-1:exon
so has part: feature:765392-765532:-1:exon
so has part: feature:765094-765312:-1:exon
so has part: feature:764894-765008:-1:exon
so has part: feature:764599-764810:-1:exon
so has part: feature:764039-764246:-1:exon
so has part: feature:763342-763526:-1:exon
so has part: feature:762535-762796:-1:exon
so has part: feature:761798-761964:-1:exon
so has part: feature:761542-761710:-1:exon
so has part: feature:761351-761459:-1:exon
so has part: feature:760715-760827:-1:exon
so has part: feature:760488-760620:-1:exon
so has part: feature:760160-760310:-1:exon
so has part: feature:759680-759865:-1:exon
so has part: feature:759486-759597:-1:exon
so has part: feature:758935-759158:-1:exon

XP_030316022.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:769118-769223:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:765949-766350:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:765610-765773:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:765392-765532:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:765094-765312:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:764894-765008:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:764599-764810:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:764039-764246:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:763342-763526:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:762535-762796:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:761798-761964:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:761542-761710:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:761351-761459:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:760715-760827:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:760488-760620:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:760160-760310:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:759680-759865:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:759486-759597:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:758935-759158:-1:exon

SREBF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SREBF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sterol regulatory element-binding protein 1 isoform X3
translation: MERALEDMLQLINTPDNDFSGLFDSSFSAPDSAVAPGLPPAPGTLGTYLGPSKPPPTSPTSGGVYPGPSGMATFTPQPPALLQPAPVPAPGVKEEPVAVASSQPQPQPGMMVASSFVPASPTGQFNPQPLVGYQNQHTFSAVQPGGAGQTLPSSLPTPQPGQPVTLPGPVQSVAPPQLLAPAAPQPVSSQIQPVPVLLQPHFIKADSLLLTAVKTDAGSAKTSTITSLATSASGSATPLQVPALVSGGTILATVPLVVDAEKLPINRLAPSGKAALVQSRGEKRTAHNAIEKRYRSSINDKIVELKDLVVGTEAKLNKSAILRKAIEYIRFLQQSNQKLKQENLTLKMAMQKNQSLKDLVSSCRGGSKAEAPTEVVKAEVMEMLTPPPSDVGSPSHSSPLSLSGGSSNSSSDSEPDSPLCDHGKVKQEHRPPPSPSSQGMLDRSRMALCAFVLLCLSFNPLSSLLRGSGASASVGSAGTAGPGRTIMAESGTVEEPWGWSQWLWPTLAFWVLNTGLVLGAVVRLFVCGEPVTRPHSEPSILFWRHRRQADLDLHRGDFAQGAQHLRTALGALGRPLPASHGDLACSLLWSLLRHLLQRLWVGRWLAARAGGLRPDPPTRDHVRQSARDAAMAYHRLHQLHLAGKQAGGHLLAINLALSAVNLAECAGDAVSVAALAEIYVAAALRVKASLHRCFHFLARPFLCSARRVALSHGGAVPPAMQWLCHPLGHRFFVDGDWAVKGVPRETIYSSTGNPVDPLAQVTQLFREHLLEKALCCVAMPEPGRPAAQGEGRRFSDALEYLQLLNGCSDASSEPGPAPSISSGLAAITGTDPVSKWWASIITTVIHWLQGDEEGAERLYPLVETMPRALQSSERPLPRAALHSFRAVRAMLSKQDSLSHCEKASSCLRESLELGNPPKGNIDKAVQLLLCDLLLVTRTNLWQQQMTASQQRSCLYQASALELRGFQQDLSSLRRLAQTLRPAMRRVFLHEATARLMARASPTRTHQLLDRSLRRRGVQGSKTAGEPESHPTPREHAEALLLACCYLPPSFLSGPGQRVGMLAEAARTLEKLGDKRTLHDCQQMIIKLGSGTTVTSG
SIO_010081: SREBF1
subclass of: SO_0000673
so part of: SREBF1
location: complement(join(758935..759158,759486..759597,759680..759865,760160..760310,760488..760620,760715..760827,761351..761459,761542..761710,761798..761964,762535..762796,763342..763526,764039..764246,764599..764810,764894..765008,765094..765312,765392..765532,765610..765773,765949..766350,767210..767228))
location: region:758935-767228:-1
so has part: feature:767210-767228:-1:exon
so has part: feature:765949-766350:-1:exon
so has part: feature:765610-765773:-1:exon
so has part: feature:765392-765532:-1:exon
so has part: feature:765094-765312:-1:exon
so has part: feature:764894-765008:-1:exon
so has part: feature:764599-764810:-1:exon
so has part: feature:764039-764246:-1:exon
so has part: feature:763342-763526:-1:exon
so has part: feature:762535-762796:-1:exon
so has part: feature:761798-761964:-1:exon
so has part: feature:761542-761710:-1:exon
so has part: feature:761351-761459:-1:exon
so has part: feature:760715-760827:-1:exon
so has part: feature:760488-760620:-1:exon
so has part: feature:760160-760310:-1:exon
so has part: feature:759680-759865:-1:exon
so has part: feature:759486-759597:-1:exon
so has part: feature:758935-759158:-1:exon

XP_030316025.1
type: Protein
SIO_000068: ncbiprotein

position:767228:-1
position: 767228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:767210-767228:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:765949-766350:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:765610-765773:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:765392-765532:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:765094-765312:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:764894-765008:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:764599-764810:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:764039-764246:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:763342-763526:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:762535-762796:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:761798-761964:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:761542-761710:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:761351-761459:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:760715-760827:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:760488-760620:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:760160-760310:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:759680-759865:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:759486-759597:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:758935-759158:-1:exon

TOM1L2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: TOM1L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(772876..829747)
location: region:772876-829747:-1
so has part: feature:772876-829747:-1:exon
subclass of: SO_0000010

103533063
type: Gene
SIO_000068: ncbigene

position:772876:-1
position: 772876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829747:-1
position: 829747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:772876-829747:-1:exon

TOM1L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TOM1L2
product: target of myb1 like 2 membrane trafficking protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 ESTs, 6 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_008498879.2
SIO_010081: TOM1L2
subclass of: SO_0000673
so part of: TOM1L2
location: complement(join(772876..778295,779300..779336,781945..782004,792292..792367,794270..794387,795463..795586,796646..796694,799138..799271,801789..801905,802672..802830,803770..803904,808183..808332,809964..810042,810717..810801,829657..829738))
location: region:772876-829738:-1
so has part: feature:829657-829738:-1:exon
so has part: feature:810717-810801:-1:exon
so has part: feature:809964-810042:-1:exon
so has part: feature:808183-808332:-1:exon
so has part: feature:803770-803904:-1:exon
so has part: feature:802672-802830:-1:exon
so has part: feature:801789-801905:-1:exon
so has part: feature:799138-799271:-1:exon
so has part: feature:796646-796694:-1:exon
so has part: feature:795463-795586:-1:exon
so has part: feature:794270-794387:-1:exon
so has part: feature:792292-792367:-1:exon
so has part: feature:781945-782004:-1:exon
so has part: feature:779300-779336:-1:exon
so has part: feature:772876-778295:-1:exon

position:829738:-1
position: 829738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:829657-829738:-1:exon

position:829657:-1
position: 829657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:810717-810801:-1:exon

position:810717:-1
position: 810717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:810801:-1
position: 810801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:809964-810042:-1:exon

position:809964:-1
position: 809964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:810042:-1
position: 810042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:808183-808332:-1:exon

position:808183:-1
position: 808183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:808332:-1
position: 808332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:803770-803904:-1:exon

position:803770:-1
position: 803770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:803904:-1
position: 803904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:802672-802830:-1:exon

position:802672:-1
position: 802672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802830:-1
position: 802830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:801789-801905:-1:exon

position:801789:-1
position: 801789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:801905:-1
position: 801905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:799138-799271:-1:exon

position:799138:-1
position: 799138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:799271:-1
position: 799271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:796646-796694:-1:exon

position:796646:-1
position: 796646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:796694:-1
position: 796694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:795463-795586:-1:exon

position:795463:-1
position: 795463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:795586:-1
position: 795586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:794270-794387:-1:exon

position:794270:-1
position: 794270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:794387:-1
position: 794387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:792292-792367:-1:exon

position:792292:-1
position: 792292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:792367:-1
position: 792367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:781945-782004:-1:exon

position:781945:-1
position: 781945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:782004:-1
position: 782004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:779300-779336:-1:exon

position:779300:-1
position: 779300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:779336:-1
position: 779336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:772876-778295:-1:exon

position:778295:-1
position: 778295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TOM1L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TOM1L2
product: target of myb1 like 2 membrane trafficking protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 ESTs, 11 long SRA reads, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030459546.1
SIO_010081: TOM1L2
subclass of: SO_0000673
so part of: TOM1L2
location: complement(join(774438..778295,779300..779336,792292..792367,794270..794387,795463..795586,796646..796694,799138..799271,801789..801905,802672..802830,803770..803904,808183..808332,809964..810042,810717..810801,829657..829747))
location: region:774438-829747:-1
so has part: feature:829657-829747:-1:exon
so has part: feature:810717-810801:-1:exon
so has part: feature:809964-810042:-1:exon
so has part: feature:808183-808332:-1:exon
so has part: feature:803770-803904:-1:exon
so has part: feature:802672-802830:-1:exon
so has part: feature:801789-801905:-1:exon
so has part: feature:799138-799271:-1:exon
so has part: feature:796646-796694:-1:exon
so has part: feature:795463-795586:-1:exon
so has part: feature:794270-794387:-1:exon
so has part: feature:792292-792367:-1:exon
so has part: feature:779300-779336:-1:exon
so has part: feature:774438-778295:-1:exon

position:774438:-1
position: 774438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:829657-829747:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:810717-810801:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:809964-810042:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:808183-808332:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:803770-803904:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:802672-802830:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:801789-801905:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:799138-799271:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:796646-796694:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:795463-795586:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:794270-794387:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:792292-792367:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:779300-779336:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:774438-778295:-1:exon

TOM1L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TOM1L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TOM1-like protein 2 isoform X2
translation: MEFLLGNPFSTPVGQSLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNGNKNYREVMLALTVLETCVKNCGHRFHVLVANRDFIDGVLVKIISPKNNPPTIVQDKVLALIQAWADAFRSSPDLTGVVHIYEELKRKGIEFPMADLDALSPIHTPQRSVPEVDPAANMHNSQSQQRMSTSSYSSSSPTAFSAPQAPALNVTGPITANSEQIARLRSELDIVRGNTKVMSEMLTEMVPGQEDSSDLELLQELNRTCRAMQQRIVELISRVSNEEVTEELLHVNDDLNNVFLRYERFERYRSGRSTQNASNGVLNEVTEDNLIDLGPGSPAVVSPMVGNSAPTSSLSSQLAGLDLGTNSVSGTLSSLQHSNPRDDFDMFAQTRGSSLAEQRKNVTYEDPQAVKGLASALDVRKQNTGGKGDELEEGVTSEEFDKFLEERAKAAEMVPNLPSPPLEAPTPLTNPASRKKQERSEDALFAL
SIO_010081: TOM1L2
subclass of: SO_0000673
so part of: TOM1L2
location: complement(join(778147..778295,779300..779336,792292..792367,794270..794387,795463..795586,796646..796694,799138..799271,801789..801905,802672..802830,803770..803904,808183..808332,809964..810042,810717..810801,829657..829708))
location: region:778147-829708:-1
so has part: feature:829657-829708:-1:exon
so has part: feature:810717-810801:-1:exon
so has part: feature:809964-810042:-1:exon
so has part: feature:808183-808332:-1:exon
so has part: feature:803770-803904:-1:exon
so has part: feature:802672-802830:-1:exon
so has part: feature:801789-801905:-1:exon
so has part: feature:799138-799271:-1:exon
so has part: feature:796646-796694:-1:exon
so has part: feature:795463-795586:-1:exon
so has part: feature:794270-794387:-1:exon
so has part: feature:792292-792367:-1:exon
so has part: feature:779300-779336:-1:exon
so has part: feature:778147-778295:-1:exon

XP_030315406.1
type: Protein
SIO_000068: ncbiprotein

position:778147:-1
position: 778147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829708:-1
position: 829708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:829657-829708:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:810717-810801:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:809964-810042:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:808183-808332:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:803770-803904:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:802672-802830:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:801789-801905:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:799138-799271:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:796646-796694:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:795463-795586:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:794270-794387:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:792292-792367:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:779300-779336:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:778147-778295:-1:exon

TOM1L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TOM1L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TOM1-like protein 2 isoform X1
translation: MEFLLGNPFSTPVGQSLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNGNKNYREVMLALTVLETCVKNCGHRFHVLVANRDFIDGVLVKIISPKNNPPTIVQDKVLALIQAWADAFRSSPDLTGVVHIYEELKRKGIEFPMADLDALSPIHTPQRSVPEVDPAANMHNSQSQQRMSTSSYSSSSPTAFSAPQAPALNVTGPITANSEQIARLRSELDIVRGNTKVMSEMLTEMVPGQEDSSDLELLQELNRTCRAMQQRIVELISRVSNEEVTEELLHVNDDLNNVFLRYERFERYRSGRSTQNASNGVLNEVTEDNLIDLGPGSPAVVSPMVGNSAPTSSLSSQLAGLDLGTNSVSGTLSSLQHSNPRDDFDMFAQTRGSSLAEQRKNVTYEDPQAVKGLASALDVRKQNTGGIPVAQSSVMDDIEEWLSTDLKGDELEEGVTSEEFDKFLEERAKAAEMVPNLPSPPLEAPTPLTNPASRKKQERSEDALFAL
SIO_010081: TOM1L2
subclass of: SO_0000673
so part of: TOM1L2
location: complement(join(778147..778295,779300..779336,781945..782004,792292..792367,794270..794387,795463..795586,796646..796694,799138..799271,801789..801905,802672..802830,803770..803904,808183..808332,809964..810042,810717..810801,829657..829708))
location: region:778147-829708:-1
so has part: feature:829657-829708:-1:exon
so has part: feature:810717-810801:-1:exon
so has part: feature:809964-810042:-1:exon
so has part: feature:808183-808332:-1:exon
so has part: feature:803770-803904:-1:exon
so has part: feature:802672-802830:-1:exon
so has part: feature:801789-801905:-1:exon
so has part: feature:799138-799271:-1:exon
so has part: feature:796646-796694:-1:exon
so has part: feature:795463-795586:-1:exon
so has part: feature:794270-794387:-1:exon
so has part: feature:792292-792367:-1:exon
so has part: feature:781945-782004:-1:exon
so has part: feature:779300-779336:-1:exon
so has part: feature:778147-778295:-1:exon

XP_008497101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:829657-829708:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:810717-810801:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:809964-810042:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:808183-808332:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:803770-803904:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:802672-802830:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:801789-801905:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:799138-799271:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:796646-796694:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:795463-795586:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:794270-794387:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:792292-792367:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:781945-782004:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:779300-779336:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:778147-778295:-1:exon

DRC3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: DRC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 831745..847977
location: region:831745-847977:1
so has part: feature:831745-847977:1:exon
subclass of: SO_0000010

103533095
type: Gene
SIO_000068: ncbigene

position:831745:1
position: 831745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:847977:1
position: 847977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:831745-847977:1:exon

DRC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: DRC3
product: dynein regulatory complex subunit 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 40% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030459897.1
SIO_010081: DRC3
subclass of: SO_0000673
so part of: DRC3
location: join(831745..831905,833252..833368,834893..835059,835613..835759,837426..837545,838750..838862,840269..840443,843562..843693,844971..845041,845844..845967,847282..847413,847864..847977)
location: region:831745-847977:1
so has part: feature:831745-831905:1:exon
so has part: feature:833252-833368:1:exon
so has part: feature:834893-835059:1:exon
so has part: feature:835613-835759:1:exon
so has part: feature:837426-837545:1:exon
so has part: feature:838750-838862:1:exon
so has part: feature:840269-840443:1:exon
so has part: feature:843562-843693:1:exon
so has part: feature:844971-845041:1:exon
so has part: feature:845844-845967:1:exon
so has part: feature:847282-847413:1:exon
so has part: feature:847864-847977:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:831745-831905:1:exon

position:831905:1
position: 831905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:833252-833368:1:exon

position:833252:1
position: 833252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:833368:1
position: 833368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:834893-835059:1:exon

position:834893:1
position: 834893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:835059:1
position: 835059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:835613-835759:1:exon

position:835613:1
position: 835613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:835759:1
position: 835759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:837426-837545:1:exon

position:837426:1
position: 837426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:837545:1
position: 837545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:838750-838862:1:exon

position:838750:1
position: 838750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:838862:1
position: 838862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:840269-840443:1:exon

position:840269:1
position: 840269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:840443:1
position: 840443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:843562-843693:1:exon

position:843562:1
position: 843562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:843693:1
position: 843693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:844971-845041:1:exon

position:844971:1
position: 844971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:845041:1
position: 845041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:845844-845967:1:exon

position:845844:1
position: 845844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:845967:1
position: 845967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:847282-847413:1:exon

position:847282:1
position: 847282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:847413:1
position: 847413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:847864-847977:1:exon

position:847864:1
position: 847864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DRC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: DRC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein regulatory complex subunit 3
translation: MSQSYNSIEPNVIDDEMLQRAIEEQHPEDIRKLAKMEGVDFKDVTELQLGFRNILQIGNLWQFENLTKLQLDNNIIEKIEALESLVHLVWLDLSFNNIEVIEGLDTLVKLQDLSLYNNRISKIEQMDTLQELQIFSIGKNNLTTLEDVIYLRRFKKLRSLNLAGNPLCNEEQYLLFVVGHLPELVYLDFKLVSDTTREGAVSKYRDSTELLEQEEAQALAQLEEKQAKQKEMEYHQAAFVEHLNGSFLFDRMFAEDMEAATLAYFPEVDELLQEYRKEFVSACENLFNFGLKEYEKREAEVSEFYQSLDEVLSASQQEGRKIILDFENENKKSLDEILAAGSYDIADSKRAECRKDICQLSEVLMTLEIQIADQMEELIKEFKGNIAVIVSTFIENVKELVTQCRDLENHYHEKLLEMSISVLERSASNELEEDLPADVQKLLVDKNTIVSALNVSHSIRLRMIDMRESDILISTYHWQASVTEKASQNEIERNRERVKEIVQYVDRLQEELDNIEILDMME
SIO_010081: DRC3
subclass of: SO_0000673
so part of: DRC3
location: join(831749..831905,833252..833368,834893..835059,835613..835759,837426..837545,838750..838862,840269..840443,843562..843693,844971..845041,845844..845967,847282..847413,847864..847977)
location: region:831749-847977:1
so has part: feature:831749-831905:1:exon
so has part: feature:833252-833368:1:exon
so has part: feature:834893-835059:1:exon
so has part: feature:835613-835759:1:exon
so has part: feature:837426-837545:1:exon
so has part: feature:838750-838862:1:exon
so has part: feature:840269-840443:1:exon
so has part: feature:843562-843693:1:exon
so has part: feature:844971-845041:1:exon
so has part: feature:845844-845967:1:exon
so has part: feature:847282-847413:1:exon
so has part: feature:847864-847977:1:exon

XP_030315757.1
type: Protein
SIO_000068: ncbiprotein

position:831749:1
position: 831749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:831749-831905:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:833252-833368:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:834893-835059:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:835613-835759:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:837426-837545:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:838750-838862:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:840269-840443:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:843562-843693:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:844971-845041:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:845844-845967:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:847282-847413:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:847864-847977:1:exon

ATPAF2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ATPAF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(849059..854357)
location: region:849059-854357:-1
so has part: feature:849059-854357:-1:exon
subclass of: SO_0000010

103533094
type: Gene
SIO_000068: ncbigene

position:849059:-1
position: 849059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:854357:-1
position: 854357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:849059-854357:-1:exon

ATPAF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ATPAF2
product: ATP synthase mitochondrial F1 complex assembly factor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 long SRA read, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030459654.1
SIO_010081: ATPAF2
subclass of: SO_0000673
so part of: ATPAF2
location: complement(join(849059..849680,850318..850433,850793..850905,851030..851110,851614..851711,852230..852375,852691..852735,854118..854357))
location: region:849059-854357:-1
so has part: feature:854118-854357:-1:exon
so has part: feature:852691-852735:-1:exon
so has part: feature:852230-852375:-1:exon
so has part: feature:851614-851711:-1:exon
so has part: feature:851030-851110:-1:exon
so has part: feature:850793-850905:-1:exon
so has part: feature:850318-850433:-1:exon
so has part: feature:849059-849680:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:854118-854357:-1:exon

position:854118:-1
position: 854118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:852691-852735:-1:exon

position:852691:-1
position: 852691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:852735:-1
position: 852735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:852230-852375:-1:exon

position:852230:-1
position: 852230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:852375:-1
position: 852375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:851614-851711:-1:exon

position:851614:-1
position: 851614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:851711:-1
position: 851711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:851030-851110:-1:exon

position:851030:-1
position: 851030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:851110:-1
position: 851110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:850793-850905:-1:exon

position:850793:-1
position: 850793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850905:-1
position: 850905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:850318-850433:-1:exon

position:850318:-1
position: 850318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850433:-1
position: 850433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:849059-849680:-1:exon

position:849680:-1
position: 849680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATPAF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ATPAF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase mitochondrial F1 complex assembly factor 2
translation: MWCGCRRLLWARSPPSRLLRPPPGSGPVRGRDRGYAPPAERKRFYQNVSISQGEGGFEINLDHRKLKTPQGKLFTVPSEALAIAVATEWDSQKDTMKFYTMHLTTLCNTALDNPTQRNKTQLIRAAVKFLETDTVCYRVEEPGALAELQRNEWDPIVAWAEKRYNVKIGSSTSILGPNIPASTKETFISQLASYNVWALQGIEYVITQLKSLILSMGLIDRHITVEKAVLLSRLEEEYQIQRWGNVEWAHDYDLCELRARVAAGALFVHLCSESSTVKHKLLQD
SIO_010081: ATPAF2
subclass of: SO_0000673
so part of: ATPAF2
location: complement(join(849543..849680,850318..850433,850793..850905,851030..851110,851614..851711,852230..852375,852691..852735,854118..854235))
location: region:849543-854235:-1
so has part: feature:854118-854235:-1:exon
so has part: feature:852691-852735:-1:exon
so has part: feature:852230-852375:-1:exon
so has part: feature:851614-851711:-1:exon
so has part: feature:851030-851110:-1:exon
so has part: feature:850793-850905:-1:exon
so has part: feature:850318-850433:-1:exon
so has part: feature:849543-849680:-1:exon

XP_030315514.1
type: Protein
SIO_000068: ncbiprotein

position:849543:-1
position: 849543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:854235:-1
position: 854235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:854118-854235:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:852691-852735:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:852230-852375:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:851614-851711:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:851030-851110:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:850793-850905:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:850318-850433:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:849543-849680:-1:exon

GID4
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: GID4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 854684..862458
location: region:854684-862458:1
so has part: feature:854684-862458:1:exon
subclass of: SO_0000010

103533062
type: Gene
SIO_000068: ncbigene

position:854684:1
position: 854684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:862458:1
position: 862458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:854684-862458:1:exon

GID4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: GID4
product: GID complex subunit 4 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 13 ESTs, 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030460060.1
SIO_010081: GID4
subclass of: SO_0000673
so part of: GID4
location: join(854684..854963,857269..857328,858197..858304,858934..859035,860069..860199,861315..862458)
location: region:854684-862458:1
so has part: feature:854684-854963:1:exon
so has part: feature:857269-857328:1:exon
so has part: feature:858197-858304:1:exon
so has part: feature:858934-859035:1:exon
so has part: feature:860069-860199:1:exon
so has part: feature:861315-862458:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:854684-854963:1:exon

position:854963:1
position: 854963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:857269-857328:1:exon

position:857269:1
position: 857269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:857328:1
position: 857328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:858197-858304:1:exon

position:858197:1
position: 858197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:858304:1
position: 858304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:858934-859035:1:exon

position:858934:1
position: 858934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:859035:1
position: 859035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:860069-860199:1:exon

position:860069:1
position: 860069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:860199:1
position: 860199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:861315-862458:1:exon

position:861315:1
position: 861315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GID4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: GID4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-induced degradation protein 4 homolog
translation: MPVRSERCRAGGAAGSVSSPPSVSAASSLVPPPPINTAQPGVATSLLYSGAKFRGQQRSKGNAYEVEVVMQHVDMENSYLCGYLKIKGLTEEYPTLTTFFEGEIISKKHPFLTRKWDADEDVDRKHWGKFQAFYQYAKTFNSDDFDYEDLKNGDYVFMRWKEQFLVPDHTIKDISGASFAGFYYICFQKSAASIEGYYYHRSSEWYQSLNLTHVPEHSAPIYEFR
SIO_010081: GID4
subclass of: SO_0000673
so part of: GID4
location: join(854751..854963,857269..857328,858197..858304,858934..859035,860069..860199,861315..861378)
location: region:854751-861378:1
so has part: feature:854751-854963:1:exon
so has part: feature:857269-857328:1:exon
so has part: feature:858197-858304:1:exon
so has part: feature:858934-859035:1:exon
so has part: feature:860069-860199:1:exon
so has part: feature:861315-861378:1:exon

XP_030315920.1
type: Protein
SIO_000068: ncbiprotein

position:854751:1
position: 854751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:861378:1
position: 861378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:854751-854963:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:857269-857328:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:858197-858304:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:858934-859035:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:860069-860199:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:861315-861378:1:exon

DRG2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: DRG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 864172..874284
location: region:864172-874284:1
so has part: feature:864172-874284:1:exon
subclass of: SO_0000010

103533093
type: Gene
SIO_000068: ncbigene

position:864172:1
position: 864172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874284:1
position: 874284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:864172-874284:1:exon

DRG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: DRG2
product: developmentally regulated GTP binding protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 22 ESTs, 2 long SRA reads, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030459829.1
SIO_010081: DRG2
subclass of: SO_0000673
so part of: DRG2
location: join(864172..864325,866165..866325,866952..867041,868487..868547,869300..869390,869886..869958,870119..870209,870407..870504,870945..871021,871446..871534,872440..872498,872756..872809,872893..874284)
location: region:864172-874284:1
so has part: feature:864172-864325:1:exon
so has part: feature:866165-866325:1:exon
so has part: feature:866952-867041:1:exon
so has part: feature:868487-868547:1:exon
so has part: feature:869300-869390:1:exon
so has part: feature:869886-869958:1:exon
so has part: feature:870119-870209:1:exon
so has part: feature:870407-870504:1:exon
so has part: feature:870945-871021:1:exon
so has part: feature:871446-871534:1:exon
so has part: feature:872440-872498:1:exon
so has part: feature:872756-872809:1:exon
so has part: feature:872893-874284:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:864172-864325:1:exon

position:864325:1
position: 864325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:866165-866325:1:exon

position:866165:1
position: 866165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:866325:1
position: 866325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:866952-867041:1:exon

position:866952:1
position: 866952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:867041:1
position: 867041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:868487-868547:1:exon

position:868487:1
position: 868487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868547:1
position: 868547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:869300-869390:1:exon

position:869300:1
position: 869300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:869390:1
position: 869390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:869886-869958:1:exon

position:869886:1
position: 869886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:869958:1
position: 869958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:870119-870209:1:exon

position:870119:1
position: 870119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:870209:1
position: 870209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:870407-870504:1:exon

position:870407:1
position: 870407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:870504:1
position: 870504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:870945-871021:1:exon

position:870945:1
position: 870945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:871021:1
position: 871021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:871446-871534:1:exon

position:871446:1
position: 871446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:871534:1
position: 871534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:872440-872498:1:exon

position:872440:1
position: 872440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:872498:1
position: 872498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:872756-872809:1:exon

position:872756:1
position: 872756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:872809:1
position: 872809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:872893-874284:1:exon

position:872893:1
position: 872893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DRG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: DRG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: developmentally-regulated GTP-binding protein 2
translation: MGILEKISEIEKEIARTQKNKATEYHLGLLKAKLAKYRAQLLEPSKSSAAKGEGFDVMKSGDARVALIGFPSVGKSTFLSLMTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEGAAQGKGRGRQVIAVARTADVVIMMLDATKGEVQRALLEKELESVGIRLNKSKPNIYFKPKKGGGISFNSTVTLTQCSEKLVQLILHEYKIFNAEVLFREDCSPDEFIDVIVGNRVYMPCLYVYNKIDQISMEEVDRLARRPHSVVISCGMKLNLDYLLEKLWEYLALTCIYTKKRGQRPDFTDAIILRKGASVEHVCHRIHRSLASQFKYALVWGTSTKYSPQRVGLTHMMEHEDVIQIVKK
SIO_010081: DRG2
subclass of: SO_0000673
so part of: DRG2
location: join(864262..864325,866165..866325,866952..867041,868487..868547,869300..869390,869886..869958,870119..870209,870407..870504,870945..871021,871446..871534,872440..872498,872756..872809,872893..872979)
location: region:864262-872979:1
so has part: feature:864262-864325:1:exon
so has part: feature:866165-866325:1:exon
so has part: feature:866952-867041:1:exon
so has part: feature:868487-868547:1:exon
so has part: feature:869300-869390:1:exon
so has part: feature:869886-869958:1:exon
so has part: feature:870119-870209:1:exon
so has part: feature:870407-870504:1:exon
so has part: feature:870945-871021:1:exon
so has part: feature:871446-871534:1:exon
so has part: feature:872440-872498:1:exon
so has part: feature:872756-872809:1:exon
so has part: feature:872893-872979:1:exon

XP_030315689.1
type: Protein
SIO_000068: ncbiprotein

position:864262:1
position: 864262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:872979:1
position: 872979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:864262-864325:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:866165-866325:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:866952-867041:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:868487-868547:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:869300-869390:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:869886-869958:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:870119-870209:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:870407-870504:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:870945-871021:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:871446-871534:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:872440-872498:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:872756-872809:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:872893-872979:1:exon

MYO15A
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: MYO15A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 879629..903100
location: region:879629-903100:1
so has part: feature:879629-903100:1:exon
subclass of: SO_0000010

103533090
type: Gene
SIO_000068: ncbigene

position:879629:1
position: 879629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:903100:1
position: 903100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:879629-903100:1:exon

MYO15A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MYO15A
product: myosin XVA
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030459959.1
SIO_010081: MYO15A
subclass of: SO_0000673
so part of: MYO15A
location: join(879629..883330,884231..884313,884525..884588,884694..884803,885017..885091,885228..885318,885453..885458,885739..885842,886321..886384,886467..886580,886758..886919,887035..887148,887246..887304,887899..888022,888098..888193,888266..888397,888797..888922,889097..889174,889540..889694,889807..889852,889959..890083,890287..890404,890482..890657,890728..890812,891098..891151,891305..891386,891461..891591,892230..892325,892416..892651,893186..893364,893474..893546,893724..893915,894027..894121,894227..894315,894395..894521,894641..894702,894819..894882,894994..895135,895348..895438,895526..895622,895878..895999,896123..896182,896281..896356,896724..896839,896921..897039,897123..897264,897476..897587,897727..897801,898182..898387,898475..898608,898716..898782,898934..899006,899239..899312,899414..899496,899615..899745,899852..899946,900419..900496,900714..900810,900897..901059,901161..901294,901386..901519,901779..901912,902570..902710,902812..903100)
location: region:879629-903100:1
so has part: feature:879629-883330:1:exon
so has part: feature:884231-884313:1:exon
so has part: feature:884525-884588:1:exon
so has part: feature:884694-884803:1:exon
so has part: feature:885017-885091:1:exon
so has part: feature:885228-885318:1:exon
so has part: feature:885453-885458:1:exon
so has part: feature:885739-885842:1:exon
so has part: feature:886321-886384:1:exon
so has part: feature:886467-886580:1:exon
so has part: feature:886758-886919:1:exon
so has part: feature:887035-887148:1:exon
so has part: feature:887246-887304:1:exon
so has part: feature:887899-888022:1:exon
so has part: feature:888098-888193:1:exon
so has part: feature:888266-888397:1:exon
so has part: feature:888797-888922:1:exon
so has part: feature:889097-889174:1:exon
so has part: feature:889540-889694:1:exon
so has part: feature:889807-889852:1:exon
so has part: feature:889959-890083:1:exon
so has part: feature:890287-890404:1:exon
so has part: feature:890482-890657:1:exon
so has part: feature:890728-890812:1:exon
so has part: feature:891098-891151:1:exon
so has part: feature:891305-891386:1:exon
so has part: feature:891461-891591:1:exon
so has part: feature:892230-892325:1:exon
so has part: feature:892416-892651:1:exon
so has part: feature:893186-893364:1:exon
so has part: feature:893474-893546:1:exon
so has part: feature:893724-893915:1:exon
so has part: feature:894027-894121:1:exon
so has part: feature:894227-894315:1:exon
so has part: feature:894395-894521:1:exon
so has part: feature:894641-894702:1:exon
so has part: feature:894819-894882:1:exon
so has part: feature:894994-895135:1:exon
so has part: feature:895348-895438:1:exon
so has part: feature:895526-895622:1:exon
so has part: feature:895878-895999:1:exon
so has part: feature:896123-896182:1:exon
so has part: feature:896281-896356:1:exon
so has part: feature:896724-896839:1:exon
so has part: feature:896921-897039:1:exon
so has part: feature:897123-897264:1:exon
so has part: feature:897476-897587:1:exon
so has part: feature:897727-897801:1:exon
so has part: feature:898182-898387:1:exon
so has part: feature:898475-898608:1:exon
so has part: feature:898716-898782:1:exon
so has part: feature:898934-899006:1:exon
so has part: feature:899239-899312:1:exon
so has part: feature:899414-899496:1:exon
so has part: feature:899615-899745:1:exon
so has part: feature:899852-899946:1:exon
so has part: feature:900419-900496:1:exon
so has part: feature:900714-900810:1:exon
so has part: feature:900897-901059:1:exon
so has part: feature:901161-901294:1:exon
so has part: feature:901386-901519:1:exon
so has part: feature:901779-901912:1:exon
so has part: feature:902570-902710:1:exon
so has part: feature:902812-903100:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:879629-883330:1:exon

position:883330:1
position: 883330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:884231-884313:1:exon

position:884231:1
position: 884231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:884313:1
position: 884313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:884525-884588:1:exon

position:884525:1
position: 884525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:884588:1
position: 884588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:884694-884803:1:exon

position:884694:1
position: 884694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:884803:1
position: 884803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:885017-885091:1:exon

position:885017:1
position: 885017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885091:1
position: 885091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:885228-885318:1:exon

position:885228:1
position: 885228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885318:1
position: 885318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:885453-885458:1:exon

position:885453:1
position: 885453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885458:1
position: 885458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:885739-885842:1:exon

position:885739:1
position: 885739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885842:1
position: 885842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:886321-886384:1:exon

position:886321:1
position: 886321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:886384:1
position: 886384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:886467-886580:1:exon

position:886467:1
position: 886467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:886580:1
position: 886580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:886758-886919:1:exon

position:886758:1
position: 886758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:886919:1
position: 886919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:887035-887148:1:exon

position:887035:1
position: 887035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:887148:1
position: 887148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:887246-887304:1:exon

position:887246:1
position: 887246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:887304:1
position: 887304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:887899-888022:1:exon

position:887899:1
position: 887899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:888022:1
position: 888022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:888098-888193:1:exon

position:888098:1
position: 888098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:888193:1
position: 888193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:888266-888397:1:exon

position:888266:1
position: 888266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:888397:1
position: 888397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:888797-888922:1:exon

position:888797:1
position: 888797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:888922:1
position: 888922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:889097-889174:1:exon

position:889097:1
position: 889097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:889174:1
position: 889174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:889540-889694:1:exon

position:889540:1
position: 889540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:889694:1
position: 889694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:889807-889852:1:exon

position:889807:1
position: 889807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:889852:1
position: 889852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:889959-890083:1:exon

position:889959:1
position: 889959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890083:1
position: 890083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:890287-890404:1:exon

position:890287:1
position: 890287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890404:1
position: 890404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:890482-890657:1:exon

position:890482:1
position: 890482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890657:1
position: 890657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:890728-890812:1:exon

position:890728:1
position: 890728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890812:1
position: 890812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:891098-891151:1:exon

position:891098:1
position: 891098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:891151:1
position: 891151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:891305-891386:1:exon

position:891305:1
position: 891305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:891386:1
position: 891386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:891461-891591:1:exon

position:891461:1
position: 891461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:891591:1
position: 891591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:892230-892325:1:exon

position:892230:1
position: 892230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:892325:1
position: 892325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:892416-892651:1:exon

position:892416:1
position: 892416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:892651:1
position: 892651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:893186-893364:1:exon

position:893186:1
position: 893186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:893364:1
position: 893364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:893474-893546:1:exon

position:893474:1
position: 893474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:893546:1
position: 893546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:893724-893915:1:exon

position:893724:1
position: 893724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:893915:1
position: 893915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:894027-894121:1:exon

position:894027:1
position: 894027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:894121:1
position: 894121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:894227-894315:1:exon

position:894227:1
position: 894227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:894315:1
position: 894315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:894395-894521:1:exon

position:894395:1
position: 894395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:894521:1
position: 894521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:894641-894702:1:exon

position:894641:1
position: 894641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:894702:1
position: 894702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:894819-894882:1:exon

position:894819:1
position: 894819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:894882:1
position: 894882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:894994-895135:1:exon

position:894994:1
position: 894994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895135:1
position: 895135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:895348-895438:1:exon

position:895348:1
position: 895348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895438:1
position: 895438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:895526-895622:1:exon

position:895526:1
position: 895526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895622:1
position: 895622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:895878-895999:1:exon

position:895878:1
position: 895878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895999:1
position: 895999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:896123-896182:1:exon

position:896123:1
position: 896123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:896182:1
position: 896182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:896281-896356:1:exon

position:896281:1
position: 896281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:896356:1
position: 896356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:896724-896839:1:exon

position:896724:1
position: 896724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:896839:1
position: 896839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:896921-897039:1:exon

position:896921:1
position: 896921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:897039:1
position: 897039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:897123-897264:1:exon

position:897123:1
position: 897123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:897264:1
position: 897264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:897476-897587:1:exon

position:897476:1
position: 897476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:897587:1
position: 897587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:897727-897801:1:exon

position:897727:1
position: 897727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:897801:1
position: 897801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:898182-898387:1:exon

position:898182:1
position: 898182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:898387:1
position: 898387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:898475-898608:1:exon

position:898475:1
position: 898475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:898608:1
position: 898608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:898716-898782:1:exon

position:898716:1
position: 898716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:898782:1
position: 898782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:898934-899006:1:exon

position:898934:1
position: 898934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:899006:1
position: 899006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 53
SIO_000628: feature:899239-899312:1:exon

position:899239:1
position: 899239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:899312:1
position: 899312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 54
SIO_000628: feature:899414-899496:1:exon

position:899414:1
position: 899414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:899496:1
position: 899496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 55
SIO_000628: feature:899615-899745:1:exon

position:899615:1
position: 899615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:899745:1
position: 899745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 56
SIO_000628: feature:899852-899946:1:exon

position:899852:1
position: 899852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:899946:1
position: 899946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 57
SIO_000628: feature:900419-900496:1:exon

position:900419:1
position: 900419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:900496:1
position: 900496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 58
SIO_000628: feature:900714-900810:1:exon

position:900714:1
position: 900714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:900810:1
position: 900810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 59
SIO_000628: feature:900897-901059:1:exon

position:900897:1
position: 900897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:901059:1
position: 901059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 60
SIO_000628: feature:901161-901294:1:exon

position:901161:1
position: 901161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:901294:1
position: 901294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 61
SIO_000628: feature:901386-901519:1:exon

position:901386:1
position: 901386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:901519:1
position: 901519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 62
SIO_000628: feature:901779-901912:1:exon

position:901779:1
position: 901779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:901912:1
position: 901912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 63
SIO_000628: feature:902570-902710:1:exon

position:902570:1
position: 902570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:902710:1
position: 902710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 64
SIO_000628: feature:902812-903100:1:exon

position:902812:1
position: 902812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MYO15A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MYO15A
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: unconventional myosin-XV
translation: MAGKKGETKKDAEAKGKGGKGKGKDGKKGKKEEPSETEETSDSELLKAEENEESEVGEAEEQKEVVEEEKAKDDNVEEPKKEEKGKEKKGALKGMMVKKPGRGKKVQVETEEEASESDAAPTKKNQKGTSKLAMGLSADKKKKGAKGAEAKGKAKAPAEPVLAEEEAAAVAAETEAPKARAKRSFRSTSKLFLGFKKLGLRRPKKGQFKNTSRFFWGLQKHSTKKRKKKKNKAVLKSTSNLMVRFKRVGKKRKEEEASSSPPAKPSFLLLRGGEQAAEHDESLFRRRPERKFKPRAQVLSKAATATGWLARKVLSRRGRLVGGGRTADPAWLSRIGAKKLPFPAEDEILRHRANMKRIPSARRLSASGTARLGQERPGSLVRRPSRRPSQRAPVEPPAPHYGWAEEEDGAYSRRRGYAKEQDGPYGSRRGYARKEDGAYGSRRGYTREEDGGYGPQRGYAEEEGAYGPWNDYTEEEDGVYGPRRGYTEEEGGYLQNPPYSSGFGFDDMGPSPYADYTGYETEDEYDYYGGAWEEGDPSGHPYSYSELEDEEPYEGSSPLALYDPYGSDPEYGEEATGPYGYGGDPYEDFGEPLAGGYPGGEYPEHRIQYSEGGWVPHAQSSCNPYAMGLEEIAEAEEPEEWDEEEEDDKEYPFSILSASSLRGMRETLSSKLSLNRKFRLFPRPQVKIFGRDRLDVPLPPSPHLPTTRDEDDYDEYEPPPPPPPAAPSPAAAPGRRVSAARACGSPLGQFLQRSLSQPLSRLKRGAGGFRDSRTPQPSYRRSSRRLPGMESAGSPPRASPTRDLSPQAGTRGQPSPGEPGVLRRLSLRNPFANPGSSPSPPPSRQRPGSVRGEGLRRSPSLGASIRRLGSELAAPPPATSRSPGAGGRSLGVPGTGSGRPLTPRPSRRSSPPGLPLPQAWPRLPEPPTKAVKPLQRTPFLASTSRPGSRRLGPSWDEELPSWQGVARGLARVPPPPNPAPSNPKTFIQRIGQPLAGMAPRSSPARPSPTEVGGRSPSVGQSLASLLVESMTPTQTPSSPHPARRPSSRLPPWPRRPSQRDGSTRRPPSPPAGRRGWADALRPVLPSSLRGNRSPSPQRRAAFPAPRGRAPGSPATPRRGPEAIEGDGLAGEEGAGRYAVVTPQVQRLGSFRRASRMYKQHWSTQHVVRVREMPDAWTAEQGPPQLPGQRSRRWASQRGADITRYLNRHSPGAGWKDRHPWAQGYLGTKQPWRTKMQSLCSLPIVRYQEVKEEDGLEDMTQLEDLQEATVLSNLRTRFERQLVYTYIGSILLSVNPYRLYNIYGTEQVLQYEGRALGENPPHLFAIANVAYSKVMDAKHNQCIVISGESGSGKTEATKLILRYLAAVSQKRSTAPQIEILEATPLLESFGNAKTVRNDNSSRFGKFVEIFLEDGLICGAITSQYLLEKSRVVFQAKSERNYHIFYEMLAGLPTQQRQRYCLQGAETYYYLNQGGNCEIPGKDDAEDFHRLLNTMEVLNFSLEEQNSIFRILSSVLHLGNVYFEKYESDCQEVAMVVSDAEIRTVAELLQVSPEGLQKAITFKVTEALREKIYTPLTVESAVDARDAIAKTLYSLLFSWLTDRINKLVYPRREALSIAILDIYGFEDLTFNSFEQLCINYANEYLQFFFNKIVFQEEQEEYIREQIEWKEIPFSDNQPCIDLISQKPYGILRILDDQSCFPQATDHTFLQKCHYHHGMNPLYTKPKMPLPEFTIKHYAGKVTYQVHKFLDKNYDQVRQDVLDLFINSRTKVVANLFFGHAQVLARQRSLVRRSSTRTRRYKAPTVAARFQQSLLELVERMERCNPFFVRCLKPNNKKEPGLFENDVVRSQLRYSGILETIRIRKEGFPIRIPFFVFIDRYRCLVDMWSRVIPNGANCVEMLRSLCPVNPSMYYVGVSKLFLKEQLYQSLESKRSRAHHLAALTLQRYARTFFIKKRFRSLRRKIVLLQTRARGYLARQRYRRMRRTLIKFRSLVHIYVNRRR…
SIO_010081: MYO15A
subclass of: SO_0000673
so part of: MYO15A
location: join(879629..883330,884231..884313,884525..884588,884694..884803,885017..885091,885228..885318,885453..885458,885739..885842,886321..886384,886467..886580,886758..886919,887035..887148,887246..887304,887899..888022,888098..888193,888266..888397,888797..888922,889097..889174,889540..889694,889807..889852,889959..890083,890287..890404,890482..890657,890728..890812,891098..891151,891305..891386,891461..891591,892230..892325,892416..892651,893186..893364,893474..893546,893724..893915,894027..894121,894227..894315,894395..894521,894641..894702,894819..894882,894994..895135,895348..895438,895526..895622,895878..895999,896123..896182,896281..896356,896724..896839,896921..897039,897123..897264,897476..897587,897727..897801,898182..898387,898475..898608,898716..898782,898934..899006,899239..899312,899414..899496,899615..899745,899852..899946,900419..900496,900714..900810,900897..901059,901161..901294,901386..901519,901779..901912,902570..902710,902812..902913)
location: region:879629-902913:1
so has part: feature:879629-883330:1:exon
so has part: feature:884231-884313:1:exon
so has part: feature:884525-884588:1:exon
so has part: feature:884694-884803:1:exon
so has part: feature:885017-885091:1:exon
so has part: feature:885228-885318:1:exon
so has part: feature:885453-885458:1:exon
so has part: feature:885739-885842:1:exon
so has part: feature:886321-886384:1:exon
so has part: feature:886467-886580:1:exon
so has part: feature:886758-886919:1:exon
so has part: feature:887035-887148:1:exon
so has part: feature:887246-887304:1:exon
so has part: feature:887899-888022:1:exon
so has part: feature:888098-888193:1:exon
so has part: feature:888266-888397:1:exon
so has part: feature:888797-888922:1:exon
so has part: feature:889097-889174:1:exon
so has part: feature:889540-889694:1:exon
so has part: feature:889807-889852:1:exon
so has part: feature:889959-890083:1:exon
so has part: feature:890287-890404:1:exon
so has part: feature:890482-890657:1:exon
so has part: feature:890728-890812:1:exon
so has part: feature:891098-891151:1:exon
so has part: feature:891305-891386:1:exon
so has part: feature:891461-891591:1:exon
so has part: feature:892230-892325:1:exon
so has part: feature:892416-892651:1:exon
so has part: feature:893186-893364:1:exon
so has part: feature:893474-893546:1:exon
so has part: feature:893724-893915:1:exon
so has part: feature:894027-894121:1:exon
so has part: feature:894227-894315:1:exon
so has part: feature:894395-894521:1:exon
so has part: feature:894641-894702:1:exon
so has part: feature:894819-894882:1:exon
so has part: feature:894994-895135:1:exon
so has part: feature:895348-895438:1:exon
so has part: feature:895526-895622:1:exon
so has part: feature:895878-895999:1:exon
so has part: feature:896123-896182:1:exon
so has part: feature:896281-896356:1:exon
so has part: feature:896724-896839:1:exon
so has part: feature:896921-897039:1:exon
so has part: feature:897123-897264:1:exon
so has part: feature:897476-897587:1:exon
so has part: feature:897727-897801:1:exon
so has part: feature:898182-898387:1:exon
so has part: feature:898475-898608:1:exon
so has part: feature:898716-898782:1:exon
so has part: feature:898934-899006:1:exon
so has part: feature:899239-899312:1:exon
so has part: feature:899414-899496:1:exon
so has part: feature:899615-899745:1:exon
so has part: feature:899852-899946:1:exon
so has part: feature:900419-900496:1:exon
so has part: feature:900714-900810:1:exon
so has part: feature:900897-901059:1:exon
so has part: feature:901161-901294:1:exon
so has part: feature:901386-901519:1:exon
so has part: feature:901779-901912:1:exon
so has part: feature:902570-902710:1:exon
so has part: feature:902812-902913:1:exon

XP_030315819.1
type: Protein
SIO_000068: ncbiprotein

position:902913:1
position: 902913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:879629-883330:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:884231-884313:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:884525-884588:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:884694-884803:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:885017-885091:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:885228-885318:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:885453-885458:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:885739-885842:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:886321-886384:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:886467-886580:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:886758-886919:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:887035-887148:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:887246-887304:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:887899-888022:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:888098-888193:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:888266-888397:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:888797-888922:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:889097-889174:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:889540-889694:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:889807-889852:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:889959-890083:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:890287-890404:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:890482-890657:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:890728-890812:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:891098-891151:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:891305-891386:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:891461-891591:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:892230-892325:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:892416-892651:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:893186-893364:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:893474-893546:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:893724-893915:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:894027-894121:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:894227-894315:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:894395-894521:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:894641-894702:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:894819-894882:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:894994-895135:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:895348-895438:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:895526-895622:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:895878-895999:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:896123-896182:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:896281-896356:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:896724-896839:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:896921-897039:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:897123-897264:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:897476-897587:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:897727-897801:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:898182-898387:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:898475-898608:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:898716-898782:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:898934-899006:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:899239-899312:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:899414-899496:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:899615-899745:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:899852-899946:1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:900419-900496:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:900714-900810:1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:900897-901059:1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:901161-901294:1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:901386-901519:1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:901779-901912:1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:902570-902710:1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:902812-902913:1:exon

ALKBH5
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ALKBH5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 904058..921692
location: region:904058-921692:1
so has part: feature:904058-921692:1:exon
subclass of: SO_0000010

103533089
type: Gene
SIO_000068: ncbigene

position:904058:1
position: 904058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:921692:1
position: 921692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:904058-921692:1:exon

ALKBH5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ALKBH5
product: alkB homolog 5, RNA demethylase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 5 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030459960.1
SIO_010081: ALKBH5
subclass of: SO_0000673
so part of: ALKBH5
location: join(904058..904389,904591..905410,910894..910974,915257..915412,917132..921692)
location: region:904058-921692:1
so has part: feature:904058-904389:1:exon
so has part: feature:904591-905410:1:exon
so has part: feature:910894-910974:1:exon
so has part: feature:915257-915412:1:exon
so has part: feature:917132-921692:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:904058-904389:1:exon

position:904389:1
position: 904389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:904591-905410:1:exon

position:904591:1
position: 904591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:905410:1
position: 905410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:910894-910974:1:exon

position:910894:1
position: 910894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:910974:1
position: 910974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:915257-915412:1:exon

position:915257:1
position: 915257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:915412:1
position: 915412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:917132-921692:1:exon

position:917132:1
position: 917132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ALKBH5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ALKBH5
product: alkB homolog 5, RNA demethylase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 5 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030459961.1
SIO_010081: ALKBH5
subclass of: SO_0000673
so part of: ALKBH5
location: join(904058..904389,904594..905410,910894..910974,915257..915412,917132..921692)
location: region:904058-921692:1
so has part: feature:904058-904389:1:exon
so has part: feature:904594-905410:1:exon
so has part: feature:910894-910974:1:exon
so has part: feature:915257-915412:1:exon
so has part: feature:917132-921692:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:904058-904389:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:904594-905410:1:exon

position:904594:1
position: 904594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:910894-910974:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:915257-915412:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:917132-921692:1:exon

ALKBH5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ALKBH5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA demethylase ALKBH5
translation: MAGSGYTDLREKLKSMMPYRDGHKGGGGGGGGLPRDLPEPPYDRKRRHQDDSGSEASDYEEQKEEEEARKVKSGIRQLRLFSAEECAKIEARIEEVVSRAEKGLYKEHTVDRAPLRNKYFFGEGYTYGSQLQRRGPGQERLYPRGEVDAIPEWVHDLVIRKLVEHRVIPEGFVNSAVINDYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFKPIRVSEPVLFLPVKRGSVTVLSGYAADEITHCIRPQDIKERRAVIILRKTRIDAPRLETKSLSSSVLPPGYNSDRLSGNNRDQILKPKRSHRKADPDAAHRPRILEMDKEENRRSVLLPKHRRRSNFSSENYWRRSYEYTEDCDEEEEDGSPARKVKMRRH
SIO_010081: ALKBH5
subclass of: SO_0000673
so part of: ALKBH5
location: join(904683..905410,910894..910974,915257..915412,917132..917315)
location: region:904683-917315:1
so has part: feature:904683-905410:1:exon
so has part: feature:910894-910974:1:exon
so has part: feature:915257-915412:1:exon
so has part: feature:917132-917315:1:exon

XP_030315820.1
type: Protein
SIO_000068: ncbiprotein

position:904683:1
position: 904683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:917315:1
position: 917315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:904683-905410:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:910894-910974:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:915257-915412:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:917132-917315:1:exon

ALKBH5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ALKBH5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA demethylase ALKBH5
translation: MAGSGYTDLREKLKSMMPYRDGHKGGGGGGGGLPRDLPEPPYDRKRRHQDDSGSEASDYEEQKEEEEARKVKSGIRQLRLFSAEECAKIEARIEEVVSRAEKGLYKEHTVDRAPLRNKYFFGEGYTYGSQLQRRGPGQERLYPRGEVDAIPEWVHDLVIRKLVEHRVIPEGFVNSAVINDYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFKPIRVSEPVLFLPVKRGSVTVLSGYAADEITHCIRPQDIKERRAVIILRKTRIDAPRLETKSLSSSVLPPGYNSDRLSGNNRDQILKPKRSHRKADPDAAHRPRILEMDKEENRRSVLLPKHRRRSNFSSENYWRRSYEYTEDCDEEEEDGSPARKVKMRRH
SIO_010081: ALKBH5
subclass of: SO_0000673
so part of: ALKBH5
location: join(904683..905410,910894..910974,915257..915412,917132..917315)
location: region:904683-917315:1
so has part: feature:904683-905410:1:exon
so has part: feature:910894-910974:1:exon
so has part: feature:915257-915412:1:exon
so has part: feature:917132-917315:1:exon

XP_030315821.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:904683-905410:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:910894-910974:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:915257-915412:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:917132-917315:1:exon

LLGL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LLGL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 923192..935453
location: region:923192-935453:1
so has part: feature:923192-935453:1:exon
subclass of: SO_0000010

103533060
type: Gene
SIO_000068: ncbigene

position:923192:1
position: 923192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:935453:1
position: 935453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:923192-935453:1:exon

LLGL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LLGL1
product: LLGL scribble cell polarity complex component 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030460029.1
SIO_010081: LLGL1
subclass of: SO_0000673
so part of: LLGL1
location: join(923192..923502,926121..926218,928218..928299,928382..928512,928927..929085,929164..929326,929418..929553,929644..929698,929822..929979,930063..930280,930404..930471,930775..930928,931286..931390,931751..932043,932128..932281,932361..932514,932614..932897,933165..933429,933542..933656,933748..933842,933956..934079,934168..934247,934444..935453)
location: region:923192-935453:1
so has part: feature:923192-923502:1:exon
so has part: feature:926121-926218:1:exon
so has part: feature:928218-928299:1:exon
so has part: feature:928382-928512:1:exon
so has part: feature:928927-929085:1:exon
so has part: feature:929164-929326:1:exon
so has part: feature:929418-929553:1:exon
so has part: feature:929644-929698:1:exon
so has part: feature:929822-929979:1:exon
so has part: feature:930063-930280:1:exon
so has part: feature:930404-930471:1:exon
so has part: feature:930775-930928:1:exon
so has part: feature:931286-931390:1:exon
so has part: feature:931751-932043:1:exon
so has part: feature:932128-932281:1:exon
so has part: feature:932361-932514:1:exon
so has part: feature:932614-932897:1:exon
so has part: feature:933165-933429:1:exon
so has part: feature:933542-933656:1:exon
so has part: feature:933748-933842:1:exon
so has part: feature:933956-934079:1:exon
so has part: feature:934168-934247:1:exon
so has part: feature:934444-935453:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:923192-923502:1:exon

position:923502:1
position: 923502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:926121-926218:1:exon

position:926121:1
position: 926121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:926218:1
position: 926218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:928218-928299:1:exon

position:928218:1
position: 928218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:928299:1
position: 928299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:928382-928512:1:exon

position:928382:1
position: 928382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:928512:1
position: 928512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:928927-929085:1:exon

position:928927:1
position: 928927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929085:1
position: 929085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:929164-929326:1:exon

position:929164:1
position: 929164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929326:1
position: 929326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:929418-929553:1:exon

position:929418:1
position: 929418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929553:1
position: 929553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:929644-929698:1:exon

position:929644:1
position: 929644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929698:1
position: 929698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:929822-929979:1:exon

position:929822:1
position: 929822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929979:1
position: 929979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:930063-930280:1:exon

position:930063:1
position: 930063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:930280:1
position: 930280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:930404-930471:1:exon

position:930404:1
position: 930404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:930471:1
position: 930471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:930775-930928:1:exon

position:930775:1
position: 930775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:930928:1
position: 930928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:931286-931390:1:exon

position:931286:1
position: 931286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:931390:1
position: 931390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:931751-932043:1:exon

position:931751:1
position: 931751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:932043:1
position: 932043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:932128-932281:1:exon

position:932128:1
position: 932128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:932281:1
position: 932281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:932361-932514:1:exon

position:932361:1
position: 932361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:932514:1
position: 932514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:932614-932897:1:exon

position:932614:1
position: 932614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:932897:1
position: 932897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:933165-933429:1:exon

position:933165:1
position: 933165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:933429:1
position: 933429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:933542-933656:1:exon

position:933542:1
position: 933542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:933656:1
position: 933656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:933748-933842:1:exon

position:933748:1
position: 933748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:933842:1
position: 933842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:933956-934079:1:exon

position:933956:1
position: 933956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:934079:1
position: 934079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:934168-934247:1:exon

position:934168:1
position: 934168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:934247:1
position: 934247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:934444-935453:1:exon

position:934444:1
position: 934444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LLGL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LLGL1
product: LLGL scribble cell polarity complex component 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030460030.1
SIO_010081: LLGL1
subclass of: SO_0000673
so part of: LLGL1
location: join(923192..923502,926121..926218,928218..928299,928382..928497,928927..929085,929164..929326,929418..929553,929644..929698,929822..929979,930063..930280,930404..930471,930775..930928,931286..931390,931751..932043,932128..932281,932361..932514,932614..932897,933165..933429,933542..933656,933748..933842,933956..934079,934168..934247,934444..935453)
location: region:923192-935453:1
so has part: feature:923192-923502:1:exon
so has part: feature:926121-926218:1:exon
so has part: feature:928218-928299:1:exon
so has part: feature:928382-928497:1:exon
so has part: feature:928927-929085:1:exon
so has part: feature:929164-929326:1:exon
so has part: feature:929418-929553:1:exon
so has part: feature:929644-929698:1:exon
so has part: feature:929822-929979:1:exon
so has part: feature:930063-930280:1:exon
so has part: feature:930404-930471:1:exon
so has part: feature:930775-930928:1:exon
so has part: feature:931286-931390:1:exon
so has part: feature:931751-932043:1:exon
so has part: feature:932128-932281:1:exon
so has part: feature:932361-932514:1:exon
so has part: feature:932614-932897:1:exon
so has part: feature:933165-933429:1:exon
so has part: feature:933542-933656:1:exon
so has part: feature:933748-933842:1:exon
so has part: feature:933956-934079:1:exon
so has part: feature:934168-934247:1:exon
so has part: feature:934444-935453:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:923192-923502:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:926121-926218:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:928218-928299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:928382-928497:1:exon

position:928497:1
position: 928497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:928927-929085:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:929164-929326:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:929418-929553:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:929644-929698:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:929822-929979:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:930063-930280:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:930404-930471:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:930775-930928:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:931286-931390:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:931751-932043:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:932128-932281:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:932361-932514:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:932614-932897:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:933165-933429:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:933542-933656:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:933748-933842:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:933956-934079:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:934168-934247:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:934444-935453:1:exon

LLGL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LLGL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lethal(2) giant larvae protein homolog 1 isoform X1
translation: MMKFRFRRQGADPHRDRLRHDLFAFSKTVEHGFPSQPSALAYDPALRIMAIGTKAGAVKLYGAPGVELTGLHKETATVTQLHFLPGQGWLLSLLDDNTLHLWEVCQKDGCSHLEETRSFSLPGRPGSDSTNCSPGITRVTVVLPTSSSMVACLGTEGGAVYFLTLPTLVLLEDKTLFPDEVLQSVPDDYRCGKALGPVESIQEHPRDSSQLLIGYSRGLVVLWEQSTRTVQHLFLGNQQLESLAWEQSGKSIVSSHSDGGYMVWAVSGTSQRTQQPVMSTIPYGPFPCKAISKILWRTCESGNPFIIFSGGMPRASYGDRHCVSVLQGQTLATLDFTSRVIDFFTVQSAETAEGGFENPRALVVLVEEELVAIDLQTPGWPTIPAPYLAPLHSSAITCSCHVSNVPLKLWERIVSAGEQQSPRQSSAAWPIDGGKNLAQEPTQRGLLLTGHEDGTVRFWDASGVSLKPLYKLGTASIFQTDCEHNDSLNQAGEEEWPPFRKVGCFDPYSDDPRLGVQKIALCKYTAKMVVAGTAGQVLVMELSDEKSEHAVSVATVDLLQDREGFTWKGHDRLAPRNGPLSFAPGFQPSVLVQCVPPAAVTAITLHSEWNLVAFGTSHGFGLFDYYRRNPVLARCTLHPNDSLAMEGPLSRVKSLKKSLRQSFRRIRKSRVSGKKRLNASSPSSKVQEANAQLAEQVGPPEVEMTPVQRRIEPRSADDSLSGVVRCLYFADTFLRDAAHHGPTMWAGTNSGSVFAYALEVPSQEKFSERAVEAVLGKEIQLMHRAPVVAIAVLDGRGNPLPEPYEVSRDLAKAPDMQGSHSMLISSEEQFKVFTLPKVSAKTKFKLTAHEGCRVRKVALVSLASASSEERLENCLACLTNLGDIHIFTVPSLRPQVHYGCIRKEDISGIASCIFTKHGQGFYLISPSEFERFSLSARNVTEPLCRLEVARLQDTTCLSNSSTVSPKLPQANGTHVPHSPEDQHSPTNSDRSPEEHPATFSPGPIDSPNSSMENPLDTTGDITVEEVKDFLASSEEAERNLRNASEEEARPTGILIK
SIO_010081: LLGL1
subclass of: SO_0000673
so part of: LLGL1
location: join(923422..923502,926121..926218,928218..928299,928382..928512,928927..929085,929164..929326,929418..929553,929644..929698,929822..929979,930063..930280,930404..930471,930775..930928,931286..931390,931751..932043,932128..932281,932361..932514,932614..932897,933165..933429,933542..933656,933748..933842,933956..934079,934168..934246)
location: region:923422-934246:1
so has part: feature:923422-923502:1:exon
so has part: feature:926121-926218:1:exon
so has part: feature:928218-928299:1:exon
so has part: feature:928382-928512:1:exon
so has part: feature:928927-929085:1:exon
so has part: feature:929164-929326:1:exon
so has part: feature:929418-929553:1:exon
so has part: feature:929644-929698:1:exon
so has part: feature:929822-929979:1:exon
so has part: feature:930063-930280:1:exon
so has part: feature:930404-930471:1:exon
so has part: feature:930775-930928:1:exon
so has part: feature:931286-931390:1:exon
so has part: feature:931751-932043:1:exon
so has part: feature:932128-932281:1:exon
so has part: feature:932361-932514:1:exon
so has part: feature:932614-932897:1:exon
so has part: feature:933165-933429:1:exon
so has part: feature:933542-933656:1:exon
so has part: feature:933748-933842:1:exon
so has part: feature:933956-934079:1:exon
so has part: feature:934168-934246:1:exon

XP_030315889.1
type: Protein
SIO_000068: ncbiprotein

position:923422:1
position: 923422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:934246:1
position: 934246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:923422-923502:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:926121-926218:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:928218-928299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:928382-928512:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:928927-929085:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:929164-929326:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:929418-929553:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:929644-929698:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:929822-929979:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:930063-930280:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:930404-930471:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:930775-930928:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:931286-931390:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:931751-932043:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:932128-932281:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:932361-932514:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:932614-932897:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:933165-933429:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:933542-933656:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:933748-933842:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:933956-934079:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:934168-934246:1:exon

LLGL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LLGL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lethal(2) giant larvae protein homolog 1 isoform X2
translation: MMKFRFRRQGADPHRDRLRHDLFAFSKTVEHGFPSQPSALAYDPALRIMAIGTKAGAVKLYGAPGVELTGLHKETATVTQLHFLPGQGWLLSLLDDNTLHLWEVCQKDGCSHLEETRSFSLPGRPGCSPGITRVTVVLPTSSSMVACLGTEGGAVYFLTLPTLVLLEDKTLFPDEVLQSVPDDYRCGKALGPVESIQEHPRDSSQLLIGYSRGLVVLWEQSTRTVQHLFLGNQQLESLAWEQSGKSIVSSHSDGGYMVWAVSGTSQRTQQPVMSTIPYGPFPCKAISKILWRTCESGNPFIIFSGGMPRASYGDRHCVSVLQGQTLATLDFTSRVIDFFTVQSAETAEGGFENPRALVVLVEEELVAIDLQTPGWPTIPAPYLAPLHSSAITCSCHVSNVPLKLWERIVSAGEQQSPRQSSAAWPIDGGKNLAQEPTQRGLLLTGHEDGTVRFWDASGVSLKPLYKLGTASIFQTDCEHNDSLNQAGEEEWPPFRKVGCFDPYSDDPRLGVQKIALCKYTAKMVVAGTAGQVLVMELSDEKSEHAVSVATVDLLQDREGFTWKGHDRLAPRNGPLSFAPGFQPSVLVQCVPPAAVTAITLHSEWNLVAFGTSHGFGLFDYYRRNPVLARCTLHPNDSLAMEGPLSRVKSLKKSLRQSFRRIRKSRVSGKKRLNASSPSSKVQEANAQLAEQVGPPEVEMTPVQRRIEPRSADDSLSGVVRCLYFADTFLRDAAHHGPTMWAGTNSGSVFAYALEVPSQEKFSERAVEAVLGKEIQLMHRAPVVAIAVLDGRGNPLPEPYEVSRDLAKAPDMQGSHSMLISSEEQFKVFTLPKVSAKTKFKLTAHEGCRVRKVALVSLASASSEERLENCLACLTNLGDIHIFTVPSLRPQVHYGCIRKEDISGIASCIFTKHGQGFYLISPSEFERFSLSARNVTEPLCRLEVARLQDTTCLSNSSTVSPKLPQANGTHVPHSPEDQHSPTNSDRSPEEHPATFSPGPIDSPNSSMENPLDTTGDITVEEVKDFLASSEEAERNLRNASEEEARPTGILIK
SIO_010081: LLGL1
subclass of: SO_0000673
so part of: LLGL1
location: join(923422..923502,926121..926218,928218..928299,928382..928497,928927..929085,929164..929326,929418..929553,929644..929698,929822..929979,930063..930280,930404..930471,930775..930928,931286..931390,931751..932043,932128..932281,932361..932514,932614..932897,933165..933429,933542..933656,933748..933842,933956..934079,934168..934246)
location: region:923422-934246:1
so has part: feature:923422-923502:1:exon
so has part: feature:926121-926218:1:exon
so has part: feature:928218-928299:1:exon
so has part: feature:928382-928497:1:exon
so has part: feature:928927-929085:1:exon
so has part: feature:929164-929326:1:exon
so has part: feature:929418-929553:1:exon
so has part: feature:929644-929698:1:exon
so has part: feature:929822-929979:1:exon
so has part: feature:930063-930280:1:exon
so has part: feature:930404-930471:1:exon
so has part: feature:930775-930928:1:exon
so has part: feature:931286-931390:1:exon
so has part: feature:931751-932043:1:exon
so has part: feature:932128-932281:1:exon
so has part: feature:932361-932514:1:exon
so has part: feature:932614-932897:1:exon
so has part: feature:933165-933429:1:exon
so has part: feature:933542-933656:1:exon
so has part: feature:933748-933842:1:exon
so has part: feature:933956-934079:1:exon
so has part: feature:934168-934246:1:exon

XP_030315890.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:923422-923502:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:926121-926218:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:928218-928299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:928382-928497:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:928927-929085:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:929164-929326:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:929418-929553:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:929644-929698:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:929822-929979:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:930063-930280:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:930404-930471:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:930775-930928:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:931286-931390:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:931751-932043:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:932128-932281:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:932361-932514:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:932614-932897:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:933165-933429:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:933542-933656:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:933748-933842:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:933956-934079:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:934168-934246:1:exon

FLII
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: FLII
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(935700..945152)
location: region:935700-945152:-1
so has part: feature:935700-945152:-1:exon
subclass of: SO_0000010

103533087
type: Gene
SIO_000068: ncbigene

position:935700:-1
position: 935700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945152:-1
position: 945152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:935700-945152:-1:exon

FLII
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FLII
product: FLII actin remodeling protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030460228.1
SIO_010081: FLII
subclass of: SO_0000673
so part of: FLII
location: complement(join(935700..936313,936425..936490,936586..936691,936930..937036,937134..937262,937351..937411,937532..937686,937841..938066,938179..938314,938392..938584,938794..938985,939173..939277,939361..939532,939603..939686,939938..940012,940098..940180,940255..940434,940509..940721,940837..940970,941074..941221,941530..941614,941722..941879,941966..942141,942239..942342,942450..942611,942767..942852,942997..943077,943235..943306,944479..944589,945052..945152))
location: region:935700-945152:-1
so has part: feature:945052-945152:-1:exon
so has part: feature:944479-944589:-1:exon
so has part: feature:943235-943306:-1:exon
so has part: feature:942997-943077:-1:exon
so has part: feature:942767-942852:-1:exon
so has part: feature:942450-942611:-1:exon
so has part: feature:942239-942342:-1:exon
so has part: feature:941966-942141:-1:exon
so has part: feature:941722-941879:-1:exon
so has part: feature:941530-941614:-1:exon
so has part: feature:941074-941221:-1:exon
so has part: feature:940837-940970:-1:exon
so has part: feature:940509-940721:-1:exon
so has part: feature:940255-940434:-1:exon
so has part: feature:940098-940180:-1:exon
so has part: feature:939938-940012:-1:exon
so has part: feature:939603-939686:-1:exon
so has part: feature:939361-939532:-1:exon
so has part: feature:939173-939277:-1:exon
so has part: feature:938794-938985:-1:exon
so has part: feature:938392-938584:-1:exon
so has part: feature:938179-938314:-1:exon
so has part: feature:937841-938066:-1:exon
so has part: feature:937532-937686:-1:exon
so has part: feature:937351-937411:-1:exon
so has part: feature:937134-937262:-1:exon
so has part: feature:936930-937036:-1:exon
so has part: feature:936586-936691:-1:exon
so has part: feature:936425-936490:-1:exon
so has part: feature:935700-936313:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:945052-945152:-1:exon

position:945052:-1
position: 945052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:944479-944589:-1:exon

position:944479:-1
position: 944479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:944589:-1
position: 944589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:943235-943306:-1:exon

position:943235:-1
position: 943235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:943306:-1
position: 943306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:942997-943077:-1:exon

position:942997:-1
position: 942997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:943077:-1
position: 943077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:942767-942852:-1:exon

position:942767:-1
position: 942767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:942852:-1
position: 942852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:942450-942611:-1:exon

position:942450:-1
position: 942450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:942611:-1
position: 942611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:942239-942342:-1:exon

position:942239:-1
position: 942239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:942342:-1
position: 942342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:941966-942141:-1:exon

position:941966:-1
position: 941966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:942141:-1
position: 942141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:941722-941879:-1:exon

position:941722:-1
position: 941722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:941879:-1
position: 941879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:941530-941614:-1:exon

position:941530:-1
position: 941530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:941614:-1
position: 941614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:941074-941221:-1:exon

position:941074:-1
position: 941074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:941221:-1
position: 941221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:940837-940970:-1:exon

position:940837:-1
position: 940837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940970:-1
position: 940970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:940509-940721:-1:exon

position:940509:-1
position: 940509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940721:-1
position: 940721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:940255-940434:-1:exon

position:940255:-1
position: 940255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940434:-1
position: 940434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:940098-940180:-1:exon

position:940098:-1
position: 940098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940180:-1
position: 940180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:939938-940012:-1:exon

position:939938:-1
position: 939938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940012:-1
position: 940012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:939603-939686:-1:exon

position:939603:-1
position: 939603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:939686:-1
position: 939686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:939361-939532:-1:exon

position:939361:-1
position: 939361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:939532:-1
position: 939532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:939173-939277:-1:exon

position:939173:-1
position: 939173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:939277:-1
position: 939277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:938794-938985:-1:exon

position:938794:-1
position: 938794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:938985:-1
position: 938985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:938392-938584:-1:exon

position:938392:-1
position: 938392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:938584:-1
position: 938584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:938179-938314:-1:exon

position:938179:-1
position: 938179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:938314:-1
position: 938314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:937841-938066:-1:exon

position:937841:-1
position: 937841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:938066:-1
position: 938066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:937532-937686:-1:exon

position:937532:-1
position: 937532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:937686:-1
position: 937686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:937351-937411:-1:exon

position:937351:-1
position: 937351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:937411:-1
position: 937411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:937134-937262:-1:exon

position:937134:-1
position: 937134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:937262:-1
position: 937262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:936930-937036:-1:exon

position:936930:-1
position: 936930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:937036:-1
position: 937036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:936586-936691:-1:exon

position:936586:-1
position: 936586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:936691:-1
position: 936691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:936425-936490:-1:exon

position:936425:-1
position: 936425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:936490:-1
position: 936490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:935700-936313:-1:exon

position:936313:-1
position: 936313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FLII
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FLII
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(938393..938395),aa:OTHER)
product: LOW QUALITY PROTEIN: protein flightless-1 homolog
translation: MAATGVLPFVRGVDLSGNDFKGGYFPEHVKAMSSLRWLKLNRTGLCYLPEELAALQKLEHLSVSHNSLTTLHGELSGLPCLRAIVARANSLKNSGVPDDIFQLEDLSVLDLSYNQLTECPRELENAKNMLVLNLGNNSIENIPNQLFINLTDLLYLDLSNNKLESLPPQMRRLVHLQTLILNHNPLLHAQLRQLPAMLALQTLHLRNTQRTQSNLPTSLEGLVNLADVDLSCNDLSRVPECLYTLGSLRRLNLSSNQIMELSLCIDQWTQLETLNLSRNQLTSLPSAICKLTKLKKLYLNSNKLDFDGIPSGIGKLINLEEFMAANNNLELIPESLCRCSKLRKLVLNKNRLVTLPEAIHFLTDMEILDVRENPSLVMPPKPVDRTSEWYNIDFSLQNQLRLAGASPATVAAAGAGGGTKDPLARKMRLRRRKDSAQDDQAKQVLKGMSDVAQEKNKKIEESSEAKAPDLKTRRWDQGLEKPQLDYSEFFSEDVGQLPGLCVWQIENFVPTLVDEAFHGKFYEADCYIVLKTFLDENGSLNWEIYYWIGQEATLDKKACSAIHAVNLRNYLGAECRSIREEMGDESDEFLQVFDNDISYIEGGTASGFFTVEDTQYVTRLYRVYGKKNIKLEPVALKGTSLDPRFVFLLDHGLNLFVWRGSQATLSGTTKARLFAEKINKNERKGKAEITLLTQGQETPDFWEVLGGQPEEIRPCVPDDFQPHKPKLYKVGLGLGYLELPQINYKLSVEHKKRLKADLMPEMRLLQSLLDTKSVYILDCWSDVFIWIGRKSPRLVRAAALKLSQELCSMLHRPKHAMVTRNLEGTECQVFKSKFKNWDDVLRVDYTRNAEAVLQEGGLAGKVRKDAEKKDQMKADLTALFLPRQPPMPSARXEQLMEEWNEDLDGMEGFVLEGKKFARLPEEEFGHFHTHDCYVFLCRYWVPVEYEEEEEEKKKKGEGKGEEGEEEEEEKQPEEDFQCIVYFWQGREASNMGWLTFTFSLQKKFESLFPGKLEVVRMTQQQENPKFLSHFKRRFVIHRGKRKDRASPPQPSLYHIRTNGGALCTRCIQINTDAGLLNSEFCFILKVPFESTDNQGIVYTWVGRAADPDEAKLAEDIMNQMFDDSYSKQVINEGEEPENFFWVGIGSQKPYDEDAEYMKHSRLFRCSNEKGYFSVSEKCSDFCQDDLADDDIMLLDNGREVYMWVGTQTSQVEIKLSLKACQVYIQHMRSKDPTHPRKLRLVRKGNEPWPFTRCFHAWSVFRKPPA
SIO_010081: FLII
subclass of: SO_0000673
so part of: FLII
location: complement(join(936179..936313,936425..936490,936586..936691,936930..937036,937134..937262,937351..937411,937532..937686,937841..938066,938179..938314,938392..938584,938794..938985,939173..939277,939361..939532,939603..939686,939938..940012,940098..940180,940255..940434,940509..940721,940837..940970,941074..941221,941530..941614,941722..941879,941966..942141,942239..942342,942450..942611,942767..942852,942997..943077,943235..943306,944479..944589,945052..945114))
location: region:936179-945114:-1
so has part: feature:945052-945114:-1:exon
so has part: feature:944479-944589:-1:exon
so has part: feature:943235-943306:-1:exon
so has part: feature:942997-943077:-1:exon
so has part: feature:942767-942852:-1:exon
so has part: feature:942450-942611:-1:exon
so has part: feature:942239-942342:-1:exon
so has part: feature:941966-942141:-1:exon
so has part: feature:941722-941879:-1:exon
so has part: feature:941530-941614:-1:exon
so has part: feature:941074-941221:-1:exon
so has part: feature:940837-940970:-1:exon
so has part: feature:940509-940721:-1:exon
so has part: feature:940255-940434:-1:exon
so has part: feature:940098-940180:-1:exon
so has part: feature:939938-940012:-1:exon
so has part: feature:939603-939686:-1:exon
so has part: feature:939361-939532:-1:exon
so has part: feature:939173-939277:-1:exon
so has part: feature:938794-938985:-1:exon
so has part: feature:938392-938584:-1:exon
so has part: feature:938179-938314:-1:exon
so has part: feature:937841-938066:-1:exon
so has part: feature:937532-937686:-1:exon
so has part: feature:937351-937411:-1:exon
so has part: feature:937134-937262:-1:exon
so has part: feature:936930-937036:-1:exon
so has part: feature:936586-936691:-1:exon
so has part: feature:936425-936490:-1:exon
so has part: feature:936179-936313:-1:exon

XP_030316088.1
type: Protein
SIO_000068: ncbiprotein

position:936179:-1
position: 936179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945114:-1
position: 945114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:945052-945114:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:944479-944589:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:943235-943306:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:942997-943077:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:942767-942852:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:942450-942611:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:942239-942342:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:941966-942141:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:941722-941879:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:941530-941614:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:941074-941221:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:940837-940970:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:940509-940721:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:940255-940434:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:940098-940180:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:939938-940012:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:939603-939686:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:939361-939532:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:939173-939277:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:938794-938985:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:938392-938584:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:938179-938314:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:937841-938066:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:937532-937686:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:937351-937411:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:937134-937262:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:936930-937036:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:936586-936691:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:936425-936490:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:936179-936313:-1:exon

MIEF2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: MIEF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 944608..949509
location: region:944608-949509:1
so has part: feature:944608-949509:1:exon
subclass of: SO_0000010

103533086
type: Gene
SIO_000068: ncbigene

position:944608:1
position: 944608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949509:1
position: 949509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:944608-949509:1:exon

MIEF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MIEF2
product: mitochondrial elongation factor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030460225.1
SIO_010081: MIEF2
subclass of: SO_0000673
so part of: MIEF2
location: join(944608..944643,945694..945844,946313..946490,947191..949509)
location: region:944608-949509:1
so has part: feature:944608-944643:1:exon
so has part: feature:945694-945844:1:exon
so has part: feature:946313-946490:1:exon
so has part: feature:947191-949509:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:944608-944643:1:exon

position:944643:1
position: 944643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:945694-945844:1:exon

position:945694:1
position: 945694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:945844:1
position: 945844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:946313-946490:1:exon

position:946313:1
position: 946313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:946490:1
position: 946490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:947191-949509:1:exon

position:947191:1
position: 947191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MIEF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MIEF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial dynamics protein MID49 isoform X1
translation: MGAAMEFTRRRGRRQEDSGLGSVLDLLLANARLVLGVTGAAVLAIATLAVKRLIDRATSPRDEGDPKAEQKTLEESWQDLALIKATPKPPKKQRREDLSKPLLSPAQPPVPEPKGCPVPLETPRVESIPPRCLTLQEKLLSHYSTHLAVPEAQVSLALQLTRSICVQLQKFLRNKCPELPFGSLFLSGPLLDGLGALTADHIHLMLPVVLDSVLWSLIPGEDTVVRNPQYWMIKRTDLQYFPRGCSPWDRFIVGQYLSSNALGETLHKMLVASINWPAIGSLLGCVIHPLVASQELKLEVKHDEVELNVTLFPVVEMENKVLLAVPPEGLVENLWLESFYRAEVWKVKELDAGDCGARQRCLRILNGVCKSHPALRKLSGSPLTHVVLHLSATTSDWAEESLAERFQQVLEELVGYLEKGVLPSYFNHKINLFCQLLEEEVDEMGFVLYRAISEPELLLKEK
SIO_010081: MIEF2
subclass of: SO_0000673
so part of: MIEF2
location: join(944639..944643,945694..945844,946313..946490,947191..948245)
location: region:944639-948245:1
so has part: feature:944639-944643:1:exon
so has part: feature:945694-945844:1:exon
so has part: feature:946313-946490:1:exon
so has part: feature:947191-948245:1:exon

XP_030316085.1
type: Protein
SIO_000068: ncbiprotein

position:944639:1
position: 944639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:948245:1
position: 948245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:944639-944643:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:945694-945844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:946313-946490:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:947191-948245:1:exon

MIEF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MIEF2
product: mitochondrial elongation factor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030460226.1
SIO_010081: MIEF2
subclass of: SO_0000673
so part of: MIEF2
location: join(945269..945307,945694..945844,946313..946490,947191..949509)
location: region:945269-949509:1
so has part: feature:945269-945307:1:exon
so has part: feature:945694-945844:1:exon
so has part: feature:946313-946490:1:exon
so has part: feature:947191-949509:1:exon

position:945269:1
position: 945269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:945269-945307:1:exon

position:945307:1
position: 945307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:945694-945844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:946313-946490:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:947191-949509:1:exon

MIEF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MIEF2
product: mitochondrial elongation factor 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030460227.1
SIO_010081: MIEF2
subclass of: SO_0000673
so part of: MIEF2
location: join(945340..945430,945694..945844,946313..946490,947191..949509)
location: region:945340-949509:1
so has part: feature:945340-945430:1:exon
so has part: feature:945694-945844:1:exon
so has part: feature:946313-946490:1:exon
so has part: feature:947191-949509:1:exon

position:945340:1
position: 945340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:945340-945430:1:exon

position:945430:1
position: 945430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:945694-945844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:946313-946490:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:947191-949509:1:exon

MIEF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MIEF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial dynamics protein MID49 isoform X2
translation: MEFTRRRGRRQEDSGLGSVLDLLLANARLVLGVTGAAVLAIATLAVKRLIDRATSPRDEGDPKAEQKTLEESWQDLALIKATPKPPKKQRREDLSKPLLSPAQPPVPEPKGCPVPLETPRVESIPPRCLTLQEKLLSHYSTHLAVPEAQVSLALQLTRSICVQLQKFLRNKCPELPFGSLFLSGPLLDGLGALTADHIHLMLPVVLDSVLWSLIPGEDTVVRNPQYWMIKRTDLQYFPRGCSPWDRFIVGQYLSSNALGETLHKMLVASINWPAIGSLLGCVIHPLVASQELKLEVKHDEVELNVTLFPVVEMENKVLLAVPPEGLVENLWLESFYRAEVWKVKELDAGDCGARQRCLRILNGVCKSHPALRKLSGSPLTHVVLHLSATTSDWAEESLAERFQQVLEELVGYLEKGVLPSYFNHKINLFCQLLEEEVDEMGFVLYRAISEPELLLKEK
SIO_010081: MIEF2
subclass of: SO_0000673
so part of: MIEF2
location: join(945701..945844,946313..946490,947191..948245)
location: region:945701-948245:1
so has part: feature:945701-945844:1:exon
so has part: feature:946313-946490:1:exon
so has part: feature:947191-948245:1:exon

XP_030316086.1
type: Protein
SIO_000068: ncbiprotein

position:945701:1
position: 945701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:945701-945844:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:946313-946490:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:947191-948245:1:exon

MIEF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MIEF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial dynamics protein MID49 isoform X2
translation: MEFTRRRGRRQEDSGLGSVLDLLLANARLVLGVTGAAVLAIATLAVKRLIDRATSPRDEGDPKAEQKTLEESWQDLALIKATPKPPKKQRREDLSKPLLSPAQPPVPEPKGCPVPLETPRVESIPPRCLTLQEKLLSHYSTHLAVPEAQVSLALQLTRSICVQLQKFLRNKCPELPFGSLFLSGPLLDGLGALTADHIHLMLPVVLDSVLWSLIPGEDTVVRNPQYWMIKRTDLQYFPRGCSPWDRFIVGQYLSSNALGETLHKMLVASINWPAIGSLLGCVIHPLVASQELKLEVKHDEVELNVTLFPVVEMENKVLLAVPPEGLVENLWLESFYRAEVWKVKELDAGDCGARQRCLRILNGVCKSHPALRKLSGSPLTHVVLHLSATTSDWAEESLAERFQQVLEELVGYLEKGVLPSYFNHKINLFCQLLEEEVDEMGFVLYRAISEPELLLKEK
SIO_010081: MIEF2
subclass of: SO_0000673
so part of: MIEF2
location: join(945701..945844,946313..946490,947191..948245)
location: region:945701-948245:1
so has part: feature:945701-945844:1:exon
so has part: feature:946313-946490:1:exon
so has part: feature:947191-948245:1:exon

XP_030316087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:945701-945844:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:946313-946490:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:947191-948245:1:exon

TOP3A
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: TOP3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(950447..962028)
location: region:950447-962028:-1
so has part: feature:950447-962028:-1:exon
subclass of: SO_0000010

103533059
type: Gene
SIO_000068: ncbigene

position:950447:-1
position: 950447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:962028:-1
position: 962028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:950447-962028:-1:exon

TOP3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TOP3A
product: DNA topoisomerase III alpha, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 mRNAs, 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030459638.1
SIO_010081: TOP3A
subclass of: SO_0000673
so part of: TOP3A
location: complement(join(950447..951437,952426..953147,953430..953552,953841..953984,954371..954536,954618..954731,955133..955262,955675..955860,956032..956239,956360..956442,956569..956643,956774..956874,957098..957268,957871..958014,958119..958227,958776..958851,959387..959460,959876..959935,961013..961265,961775..962028))
location: region:950447-962028:-1
so has part: feature:961775-962028:-1:exon
so has part: feature:961013-961265:-1:exon
so has part: feature:959876-959935:-1:exon
so has part: feature:959387-959460:-1:exon
so has part: feature:958776-958851:-1:exon
so has part: feature:958119-958227:-1:exon
so has part: feature:957871-958014:-1:exon
so has part: feature:957098-957268:-1:exon
so has part: feature:956774-956874:-1:exon
so has part: feature:956569-956643:-1:exon
so has part: feature:956360-956442:-1:exon
so has part: feature:956032-956239:-1:exon
so has part: feature:955675-955860:-1:exon
so has part: feature:955133-955262:-1:exon
so has part: feature:954618-954731:-1:exon
so has part: feature:954371-954536:-1:exon
so has part: feature:953841-953984:-1:exon
so has part: feature:953430-953552:-1:exon
so has part: feature:952426-953147:-1:exon
so has part: feature:950447-951437:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:961775-962028:-1:exon

position:961775:-1
position: 961775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:961013-961265:-1:exon

position:961013:-1
position: 961013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:961265:-1
position: 961265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:959876-959935:-1:exon

position:959876:-1
position: 959876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:959935:-1
position: 959935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:959387-959460:-1:exon

position:959387:-1
position: 959387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:959460:-1
position: 959460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:958776-958851:-1:exon

position:958776:-1
position: 958776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:958851:-1
position: 958851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:958119-958227:-1:exon

position:958119:-1
position: 958119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:958227:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:957871-958014:-1:exon

position:957871:-1
position: 957871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:958014:-1
position: 958014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:957098-957268:-1:exon

position:957098:-1
position: 957098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:957268:-1
position: 957268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:956774-956874:-1:exon

position:956774:-1
position: 956774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:956874:-1
position: 956874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:956569-956643:-1:exon

position:956569:-1
position: 956569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:956643:-1
position: 956643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:956360-956442:-1:exon

position:956360:-1
position: 956360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:956442:-1
position: 956442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:956032-956239:-1:exon

position:956032:-1
position: 956032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:956239:-1
position: 956239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:955675-955860:-1:exon

position:955675:-1
position: 955675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:955860:-1
position: 955860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:955133-955262:-1:exon

position:955133:-1
position: 955133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:955262:-1
position: 955262
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 15
SIO_000628: feature:954618-954731:-1:exon

position:954618:-1
position: 954618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:954731:-1
position: 954731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:954371-954536:-1:exon

position:954371:-1
position: 954371
reference: sequence
type: ReverseStrandPosition
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position:954536:-1
position: 954536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:953841-953984:-1:exon

position:953841:-1
position: 953841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:953984:-1
position: 953984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:953430-953552:-1:exon

position:953430:-1
position: 953430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:953552:-1
position: 953552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:952426-953147:-1:exon

position:952426:-1
position: 952426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:953147:-1
position: 953147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:950447-951437:-1:exon

position:951437:-1
position: 951437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TOP3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TOP3A
product: DNA topoisomerase III alpha, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 mRNAs, 1 EST, 1 long SRA read, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030459637.1
SIO_010081: TOP3A
subclass of: SO_0000673
so part of: TOP3A
location: complement(join(950447..951437,952426..953147,953430..953552,953841..953984,954371..954536,954618..954731,955133..955262,955675..955860,956032..956239,956360..956442,956569..956643,956774..956874,957098..957268,957871..958014,958119..958227,958776..958851,959387..959460,959876..959935,961013..961265,961617..962015))
location: region:950447-962015:-1
so has part: feature:961617-962015:-1:exon
so has part: feature:961013-961265:-1:exon
so has part: feature:959876-959935:-1:exon
so has part: feature:959387-959460:-1:exon
so has part: feature:958776-958851:-1:exon
so has part: feature:958119-958227:-1:exon
so has part: feature:957871-958014:-1:exon
so has part: feature:957098-957268:-1:exon
so has part: feature:956774-956874:-1:exon
so has part: feature:956569-956643:-1:exon
so has part: feature:956360-956442:-1:exon
so has part: feature:956032-956239:-1:exon
so has part: feature:955675-955860:-1:exon
so has part: feature:955133-955262:-1:exon
so has part: feature:954618-954731:-1:exon
so has part: feature:954371-954536:-1:exon
so has part: feature:953841-953984:-1:exon
so has part: feature:953430-953552:-1:exon
so has part: feature:952426-953147:-1:exon
so has part: feature:950447-951437:-1:exon

position:962015:-1
position: 962015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:961617-962015:-1:exon

position:961617:-1
position: 961617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:961013-961265:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:959876-959935:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:959387-959460:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:958776-958851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:958119-958227:-1:exon