Calypte anna isolate BGI_N300 chromosome 12, bCalAnn1_v1.p, whole genome shotgun sequence.
type: Entry
definition: Calypte anna isolate BGI_N300 chromosome 12, bCalAnn1_v1.p, whole genome shotgun sequence.
sequence version: NC_044258.1
sequence date: 2019-08-24
sequence: sequence
division: CON
label: NC_044258.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA558503
dblink: SAMN02265252
keyword: WGS
keyword: RefSeq
source: Calypte anna (Anna's hummingbird)
organism: Calypte anna
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Apodiformes; Trochilidae; Calypte.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM012125.1.\nAssembly name: bCalAnn1_v1.p\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2019/05/16. The original whole-genome shotgun project has the\naccession RRCD00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 26-SEP-2018\nAssembly Method :: FALCON v. 5.1.1; FALCON unzip v. 1.0.2;\n scaff10X v. git 4.28.2018; Bionano Solve\n DLS v. 3.2.1; Salsa2 HiC v. 2.0;\n smrtanalysis Arrow polishing & gap\n filling v. 5.1.0.26412; longranger align\n v. 2.2.2; freebayes v. 1.2.0;\n purge_haplotigs v. bit 7.10.2018; gEVAL\n manual curation v. 2018-09-07\nAssembly Name :: bCalAnn1_v1.p\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 54.0x\nSequencing Technology :: PacBio RSII; 10X Genomics linked reads;\n Bionano Genomics DLS; Arima Genomics HiC\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Calypte anna Annotation Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 21352500
topology: linear
so has quality: SO_0000987
location: 1..21352500
location: region:1-21352500:1
RO_0002162: 9244

NC_044258
type: RefSeq
SIO_000068: refseq

PRJNA558503
type: BioProject
SIO_000068: bioproject

SAMN02265252
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21352500:1
position: 21352500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-21352500:1:source
so part of: sequence
organism: Calypte anna
mol type: genomic DNA
isolate: BGI_N300
chromosome: 12
sex: female
country: USA

9244
type: Taxonomy
SIO_000068: taxonomy

LOC115599003
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599003
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4590..18300)
location: region:4590-18300:-1
so has part: feature:4590-18300:-1:exon
subclass of: SO_0000011

115599003
type: Gene
SIO_000068: ncbigene

position:4590:-1
position: 4590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18300:-1
position: 18300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4590-18300:-1:exon

LOC115599003
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599003
product: uncharacterized LOC115599003
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988066.1
SIO_010081: LOC115599003
subclass of: SO_0000673
so part of: LOC115599003
location: complement(join(4590..4701,17685..17971,18265..18300))
location: region:4590-18300:-1
so has part: feature:18265-18300:-1:exon
so has part: feature:17685-17971:-1:exon
so has part: feature:4590-4701:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18265-18300:-1:exon

position:18265:-1
position: 18265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17685-17971:-1:exon

position:17685:-1
position: 17685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17971:-1
position: 17971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4590-4701:-1:exon

position:4701:-1
position: 4701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115598989
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115598989
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(18506..58396)
location: region:18506-58396:-1
so has part: feature:18506-58396:-1:exon
subclass of: SO_0000011

115598989
type: Gene
SIO_000068: ncbigene

position:18506:-1
position: 18506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58396:-1
position: 58396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18506-58396:-1:exon

LOC115598989
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115598989
product: uncharacterized LOC115598989
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988059.1
SIO_010081: LOC115598989
subclass of: SO_0000673
so part of: LOC115598989
location: complement(join(18506..18538,43043..43183,58356..58396))
location: region:18506-58396:-1
so has part: feature:58356-58396:-1:exon
so has part: feature:43043-43183:-1:exon
so has part: feature:18506-18538:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:58356-58396:-1:exon

position:58356:-1
position: 58356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:43043-43183:-1:exon

position:43043:-1
position: 43043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43183:-1
position: 43183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:18506-18538:-1:exon

position:18538:-1
position: 18538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115598988
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115598988
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 33098..36008
location: region:33098-36008:1
so has part: feature:33098-36008:1:exon
subclass of: SO_0000010

115598988
type: Gene
SIO_000068: ncbigene

position:33098:1
position: 33098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36008:1
position: 36008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33098-36008:1:exon

LOC115598988
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC115598988
product: platelet glycoprotein IX-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030458279.1
SIO_010081: LOC115598988
subclass of: SO_0000673
so part of: LOC115598988
location: join(33098..33131,34962..36008)
location: region:33098-36008:1
so has part: feature:33098-33131:1:exon
so has part: feature:34962-36008:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33098-33131:1:exon

position:33131:1
position: 33131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:34962-36008:1:exon

position:34962:1
position: 34962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115598988
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC115598988
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: platelet glycoprotein IX-like
translation: MNKRDFITLAGSALLFLFHMTQTEGCPLSCNCKLLGEEEGLQVDCSSRELVELPALPANTKRLSLQNNSLTSVPPGALDSLHSLEEVKMFDNPWHCDCHILYLKLWLEDSSASWLANIRCASPAPVRMKALRQLSGNELGVCKRLLPVKCLEFFWRDLALIAGAIITLLLVAWALKGSKKLVCQINLRQYNSRAWLLWKQPSQSHKVQ
SIO_010081: LOC115598988
subclass of: SO_0000673
so part of: LOC115598988
location: 34969..35595
location: region:34969-35595:1
so has part: feature:34969-35595:1:exon

XP_030314139.1
type: Protein
SIO_000068: ncbiprotein

position:34969:1
position: 34969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35595:1
position: 35595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34969-35595:1:exon

LOC103525254
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103525254
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 51182..69289
location: region:51182-69289:1
so has part: feature:51182-69289:1:exon
subclass of: SO_0000010

103525254
type: Gene
SIO_000068: ncbigene

position:51182:1
position: 51182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69289:1
position: 69289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51182-69289:1:exon

LOC103525254
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103525254
product: ras-related protein Rab-43, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 2 long SRA reads, 79 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030458277.1
SIO_010081: LOC103525254
subclass of: SO_0000673
so part of: LOC103525254
location: join(51182..51458,60662..60845,61734..69289)
location: region:51182-69289:1
so has part: feature:51182-51458:1:exon
so has part: feature:60662-60845:1:exon
so has part: feature:61734-69289:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:51182-51458:1:exon

position:51458:1
position: 51458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:60662-60845:1:exon

position:60662:1
position: 60662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60845:1
position: 60845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:61734-69289:1:exon

position:61734:1
position: 61734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC103525254
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103525254
product: ras-related protein Rab-43, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030458278.1
SIO_010081: LOC103525254
subclass of: SO_0000673
so part of: LOC103525254
location: join(51235..51458,60668..60845,61734..69289)
location: region:51235-69289:1
so has part: feature:51235-51458:1:exon
so has part: feature:60668-60845:1:exon
so has part: feature:61734-69289:1:exon

position:51235:1
position: 51235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51235-51458:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60668-60845:1:exon

position:60668:1
position: 60668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:61734-69289:1:exon

LOC103525254
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103525254
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-43 isoform X1
translation: MPGPAVLGAAGPGPDPEESYDFLFKLVLIGDASVGKTCLVQRFKTGAFAERQGSTIGVDFTMKSLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAVLAYDISKRGSFLSIPHWIEDVRKYAGSNIVQLLIGNKSDLSDLREVQLEEAQSLAERYDNIICAIETSAKDSSNVEEAFVKMATELMMRHGGPMFSEKNTDSIKLDSKDVVEGWGCGC
SIO_010081: LOC103525254
subclass of: SO_0000673
so part of: LOC103525254
location: join(51240..51458,60662..60845,61734..61987)
location: region:51240-61987:1
so has part: feature:51240-51458:1:exon
so has part: feature:60662-60845:1:exon
so has part: feature:61734-61987:1:exon

XP_030314137.1
type: Protein
SIO_000068: ncbiprotein

position:51240:1
position: 51240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61987:1
position: 61987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51240-51458:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60662-60845:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:61734-61987:1:exon

LOC103525254
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103525254
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-43 isoform X2
translation: MPGPAVLGAAGPGPDPEESYDFLFKLVLIGDASVGKTCLVQRFKTGAFAERQGSTIGVDFTMKSLEIQGKRVKIWDTAGQERFRTITQSYYRSANGAVLAYDISKRGSFLSIPHWIEDVRKYAGSNIVQLLIGNKSDLSDLREVQLEEAQSLAERYDNIICAIETSAKDSSNVEEAFVKMATELMMRHGGPMFSEKNTDSIKLDSKDVVEGWGCGC
SIO_010081: LOC103525254
subclass of: SO_0000673
so part of: LOC103525254
location: join(51240..51458,60668..60845,61734..61987)
location: region:51240-61987:1
so has part: feature:51240-51458:1:exon
so has part: feature:60668-60845:1:exon
so has part: feature:61734-61987:1:exon

XP_030314138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51240-51458:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60668-60845:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:61734-61987:1:exon

LOC103525244
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103525244
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(75695..87469)
location: region:75695-87469:-1
so has part: feature:75695-87469:-1:exon
subclass of: SO_0000010

103525244
type: Gene
SIO_000068: ncbigene

position:75695:-1
position: 75695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87469:-1
position: 87469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75695-87469:-1:exon

LOC103525244
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103525244
product: haloacid dehalogenase-like hydrolase domain-containing 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030458715.1
SIO_010081: LOC103525244
subclass of: SO_0000673
so part of: LOC103525244
location: complement(join(75695..77888,78719..78907,80298..80448,81345..81378,82493..82586,84014..84126,85188..85397,87339..87469))
location: region:75695-87469:-1
so has part: feature:87339-87469:-1:exon
so has part: feature:85188-85397:-1:exon
so has part: feature:84014-84126:-1:exon
so has part: feature:82493-82586:-1:exon
so has part: feature:81345-81378:-1:exon
so has part: feature:80298-80448:-1:exon
so has part: feature:78719-78907:-1:exon
so has part: feature:75695-77888:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:87339-87469:-1:exon

position:87339:-1
position: 87339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:85188-85397:-1:exon

position:85188:-1
position: 85188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85397:-1
position: 85397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:84014-84126:-1:exon

position:84014:-1
position: 84014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84126:-1
position: 84126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:82493-82586:-1:exon

position:82493:-1
position: 82493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82586:-1
position: 82586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:81345-81378:-1:exon

position:81345:-1
position: 81345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81378:-1
position: 81378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:80298-80448:-1:exon

position:80298:-1
position: 80298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80448:-1
position: 80448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:78719-78907:-1:exon

position:78719:-1
position: 78719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78907:-1
position: 78907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:75695-77888:-1:exon

position:77888:-1
position: 77888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103525244
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103525244
product: haloacid dehalogenase-like hydrolase domain-containing 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030458714.1
SIO_010081: LOC103525244
subclass of: SO_0000673
so part of: LOC103525244
location: complement(join(75695..77888,78731..78907,80298..80472,81345..81378,82493..82586,84014..84126,85188..85397,87339..87469))
location: region:75695-87469:-1
so has part: feature:87339-87469:-1:exon
so has part: feature:85188-85397:-1:exon
so has part: feature:84014-84126:-1:exon
so has part: feature:82493-82586:-1:exon
so has part: feature:81345-81378:-1:exon
so has part: feature:80298-80472:-1:exon
so has part: feature:78731-78907:-1:exon
so has part: feature:75695-77888:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:87339-87469:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:85188-85397:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84014-84126:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:82493-82586:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81345-81378:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:80298-80472:-1:exon

position:80472:-1
position: 80472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:78731-78907:-1:exon

position:78731:-1
position: 78731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:75695-77888:-1:exon

LOC103525244
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103525244
product: haloacid dehalogenase-like hydrolase domain-containing 5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030458716.1
SIO_010081: LOC103525244
subclass of: SO_0000673
so part of: LOC103525244
location: complement(join(75695..76306,77694..77888,78719..78907,80298..80472,81345..81378,82493..82586,84014..84126,85188..85397,87339..87469))
location: region:75695-87469:-1
so has part: feature:87339-87469:-1:exon
so has part: feature:85188-85397:-1:exon
so has part: feature:84014-84126:-1:exon
so has part: feature:82493-82586:-1:exon
so has part: feature:81345-81378:-1:exon
so has part: feature:80298-80472:-1:exon
so has part: feature:78719-78907:-1:exon
so has part: feature:77694-77888:-1:exon
so has part: feature:75695-76306:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:87339-87469:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:85188-85397:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84014-84126:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:82493-82586:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81345-81378:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:80298-80472:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:78719-78907:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:77694-77888:-1:exon

position:77694:-1
position: 77694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:75695-76306:-1:exon

position:76306:-1
position: 76306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103525244
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103525244
product: haloacid dehalogenase-like hydrolase domain-containing 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030458713.1
SIO_010081: LOC103525244
subclass of: SO_0000673
so part of: LOC103525244
location: complement(join(75695..77888,78719..78907,80298..80472,81345..81378,82493..82586,84014..84126,85188..85397,87339..87469))
location: region:75695-87469:-1
so has part: feature:87339-87469:-1:exon
so has part: feature:85188-85397:-1:exon
so has part: feature:84014-84126:-1:exon
so has part: feature:82493-82586:-1:exon
so has part: feature:81345-81378:-1:exon
so has part: feature:80298-80472:-1:exon
so has part: feature:78719-78907:-1:exon
so has part: feature:75695-77888:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:87339-87469:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:85188-85397:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84014-84126:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:82493-82586:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81345-81378:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:80298-80472:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:78719-78907:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:75695-77888:-1:exon

LOC103525244
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103525244
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: haloacid dehalogenase-like hydrolase domain-containing 5 isoform X4
translation: MGRSLPPLRALLRSRPGAVAAARGGGARQLNILPSFGFLFDIDGVLVRGKTPIPAAKTAFQKLVNSQGQFLVPVVFVTNAGNCLRQKKADQLSHLLGVPISQDQVMMSHSPLRMFKRYHEKCVLVSGQGPLLDIAQDLGFCQPITIETLREKHPLLDVVDHDRRPNVLYPSAVELPKIEAVVLFGEPVRWETNLQLIIDVLLTSGYPGNPYHQENYPHIPVLACNMDLMWVAEAQSPRFGHGTFMVCLENIYKKITGKDLKYEALMGKPSKLTYQYAEYLIRAQAAARQWTQPIQTLYAVGDNLMTDVYGANLYNRYLEENSRKGSKSLIQAKAAAGRGSSALSQDDEIDTSWENELASSAAAHCRNCTNKNLSSVFPTSCRTSRMLA
SIO_010081: LOC103525244
subclass of: SO_0000673
so part of: LOC103525244
location: complement(join(76237..76306,77694..77888,78719..78907,80298..80472,81345..81378,82493..82586,84014..84126,85188..85397,87339..87425))
location: region:76237-87425:-1
so has part: feature:87339-87425:-1:exon
so has part: feature:85188-85397:-1:exon
so has part: feature:84014-84126:-1:exon
so has part: feature:82493-82586:-1:exon
so has part: feature:81345-81378:-1:exon
so has part: feature:80298-80472:-1:exon
so has part: feature:78719-78907:-1:exon
so has part: feature:77694-77888:-1:exon
so has part: feature:76237-76306:-1:exon

XP_030314576.1
type: Protein
SIO_000068: ncbiprotein

position:76237:-1
position: 76237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87425:-1
position: 87425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87339-87425:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:85188-85397:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84014-84126:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:82493-82586:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81345-81378:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:80298-80472:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:78719-78907:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:77694-77888:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:76237-76306:-1:exon

LOC103525244
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103525244
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: haloacid dehalogenase-like hydrolase domain-containing 5 isoform X3
translation: MGRSLPPLRALLRSRPGAVAAARGGGARQLNILPSFGFLFDIDGVLVRGKTPIPAAKTAFQKLVNSQGQFLVPVVFVTNAGNCLRQKKADQLSHLLGVPISQDQVMMSHSPLRMFKRYHEKCVLVSGQGPLLDIAQDLGFCQPITIETLREKHPLLDVVDHDRRPNVLYPSAVELPKIEVRWETNLQLIIDVLLTSGYPGNPYHQENYPHIPVLACNMDLMWVAEAQSPRFGHGTFMVCLENIYKKITGKDLKYEALMGKPSKLTYQYAEYLIRAQAAARQWTQPIQTLYAVGDNLMTDVYGANLYNRYLEENSRKGSKSLIQAKAAAGRGSSALSQDDEIDTSWENELASSAAAHCRSVLVCTGVYNPHTEVPLDTRENITEAVFHGHRDFRFDPGLVEPDHIVPDVDAAVDLVFQLENFAHN
SIO_010081: LOC103525244
subclass of: SO_0000673
so part of: LOC103525244
location: complement(join(77492..77888,78719..78907,80298..80448,81345..81378,82493..82586,84014..84126,85188..85397,87339..87425))
location: region:77492-87425:-1
so has part: feature:87339-87425:-1:exon
so has part: feature:85188-85397:-1:exon
so has part: feature:84014-84126:-1:exon
so has part: feature:82493-82586:-1:exon
so has part: feature:81345-81378:-1:exon
so has part: feature:80298-80448:-1:exon
so has part: feature:78719-78907:-1:exon
so has part: feature:77492-77888:-1:exon

XP_030314575.1
type: Protein
SIO_000068: ncbiprotein

position:77492:-1
position: 77492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87339-87425:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:85188-85397:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84014-84126:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:82493-82586:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81345-81378:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:80298-80448:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:78719-78907:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:77492-77888:-1:exon

LOC103525244
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103525244
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: haloacid dehalogenase-like hydrolase domain-containing 5 isoform X2
translation: MGRSLPPLRALLRSRPGAVAAARGGGARQLNILPSFGFLFDIDGVLVRGKTPIPAAKTAFQKLVNSQGQFLVPVVFVTNAGNCLRQKKADQLSHLLGVPISQDQVMMSHSPLRMFKRYHEKCVLVSGQGPLLDIAQDLGFCQPITIETLREKHPLLDVVDHDRRPNVLYPSAVELPKIEAVVLFGEPVRWETNLQLIIDVLLTSGYPGNPYHQENYPHIPVLACNMDLMWVAEAQSPRFGHGTFMVCLENIYKKITGKDLKYEALMGKPSKLTYQYAEYLIRAQAAARQWTQPIQTLDNLMTDVYGANLYNRYLEENSRKGSKSLIQAKAAAGRGSSALSQDDEIDTSWENELASSAAAHCRSVLVCTGVYNPHTEVPLDTRENITEAVFHGHRDFRFDPGLVEPDHIVPDVDAAVDLVFQLENFAHN
SIO_010081: LOC103525244
subclass of: SO_0000673
so part of: LOC103525244
location: complement(join(77492..77888,78731..78907,80298..80472,81345..81378,82493..82586,84014..84126,85188..85397,87339..87425))
location: region:77492-87425:-1
so has part: feature:87339-87425:-1:exon
so has part: feature:85188-85397:-1:exon
so has part: feature:84014-84126:-1:exon
so has part: feature:82493-82586:-1:exon
so has part: feature:81345-81378:-1:exon
so has part: feature:80298-80472:-1:exon
so has part: feature:78731-78907:-1:exon
so has part: feature:77492-77888:-1:exon

XP_030314574.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87339-87425:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:85188-85397:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84014-84126:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:82493-82586:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81345-81378:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:80298-80472:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:78731-78907:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:77492-77888:-1:exon

LOC103525244
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103525244
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: haloacid dehalogenase-like hydrolase domain-containing 5 isoform X1
translation: MGRSLPPLRALLRSRPGAVAAARGGGARQLNILPSFGFLFDIDGVLVRGKTPIPAAKTAFQKLVNSQGQFLVPVVFVTNAGNCLRQKKADQLSHLLGVPISQDQVMMSHSPLRMFKRYHEKCVLVSGQGPLLDIAQDLGFCQPITIETLREKHPLLDVVDHDRRPNVLYPSAVELPKIEAVVLFGEPVRWETNLQLIIDVLLTSGYPGNPYHQENYPHIPVLACNMDLMWVAEAQSPRFGHGTFMVCLENIYKKITGKDLKYEALMGKPSKLTYQYAEYLIRAQAAARQWTQPIQTLYAVGDNLMTDVYGANLYNRYLEENSRKGSKSLIQAKAAAGRGSSALSQDDEIDTSWENELASSAAAHCRSVLVCTGVYNPHTEVPLDTRENITEAVFHGHRDFRFDPGLVEPDHIVPDVDAAVDLVFQLENFAHN
SIO_010081: LOC103525244
subclass of: SO_0000673
so part of: LOC103525244
location: complement(join(77492..77888,78719..78907,80298..80472,81345..81378,82493..82586,84014..84126,85188..85397,87339..87425))
location: region:77492-87425:-1
so has part: feature:87339-87425:-1:exon
so has part: feature:85188-85397:-1:exon
so has part: feature:84014-84126:-1:exon
so has part: feature:82493-82586:-1:exon
so has part: feature:81345-81378:-1:exon
so has part: feature:80298-80472:-1:exon
so has part: feature:78719-78907:-1:exon
so has part: feature:77492-77888:-1:exon

XP_030314573.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87339-87425:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:85188-85397:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84014-84126:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:82493-82586:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81345-81378:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:80298-80472:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:78719-78907:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:77492-77888:-1:exon

LOC103525233
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103525233
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(89331..99200)
location: region:89331-99200:-1
so has part: feature:89331-99200:-1:exon
subclass of: SO_0000010

103525233
type: Gene
SIO_000068: ncbigene

position:89331:-1
position: 89331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99200:-1
position: 99200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89331-99200:-1:exon

LOC103525233
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103525233
product: pre-mRNA-splicing factor ISY1 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030458607.1
SIO_010081: LOC103525233
subclass of: SO_0000673
so part of: LOC103525233
location: complement(join(89331..89913,90596..90713,92102..92188,92978..93084,93788..93910,94710..94827,95106..95218,95386..95428,96122..96187,97514..97565,98866..98888,99122..99200))
location: region:89331-99200:-1
so has part: feature:99122-99200:-1:exon
so has part: feature:98866-98888:-1:exon
so has part: feature:97514-97565:-1:exon
so has part: feature:96122-96187:-1:exon
so has part: feature:95386-95428:-1:exon
so has part: feature:95106-95218:-1:exon
so has part: feature:94710-94827:-1:exon
so has part: feature:93788-93910:-1:exon
so has part: feature:92978-93084:-1:exon
so has part: feature:92102-92188:-1:exon
so has part: feature:90596-90713:-1:exon
so has part: feature:89331-89913:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:99122-99200:-1:exon

position:99122:-1
position: 99122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:98866-98888:-1:exon

position:98866:-1
position: 98866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98888:-1
position: 98888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:97514-97565:-1:exon

position:97514:-1
position: 97514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97565:-1
position: 97565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:96122-96187:-1:exon

position:96122:-1
position: 96122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96187:-1
position: 96187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:95386-95428:-1:exon

position:95386:-1
position: 95386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95428:-1
position: 95428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:95106-95218:-1:exon

position:95106:-1
position: 95106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95218:-1
position: 95218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:94710-94827:-1:exon

position:94710:-1
position: 94710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94827:-1
position: 94827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:93788-93910:-1:exon

position:93788:-1
position: 93788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93910:-1
position: 93910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:92978-93084:-1:exon

position:92978:-1
position: 92978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93084:-1
position: 93084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:92102-92188:-1:exon

position:92102:-1
position: 92102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92188:-1
position: 92188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:90596-90713:-1:exon

position:90596:-1
position: 90596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90713:-1
position: 90713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:89331-89913:-1:exon

position:89913:-1
position: 89913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103525233
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103525233
product: pre-mRNA-splicing factor ISY1 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 long SRA reads, 11 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030458606.1
SIO_010081: LOC103525233
subclass of: SO_0000673
so part of: LOC103525233
location: complement(join(89936..90713,92102..92188,92978..93084,93788..93910,94710..94827,95106..95218,95386..95428,96122..96187,97514..97565,98866..98888,99122..99200))
location: region:89936-99200:-1
so has part: feature:99122-99200:-1:exon
so has part: feature:98866-98888:-1:exon
so has part: feature:97514-97565:-1:exon
so has part: feature:96122-96187:-1:exon
so has part: feature:95386-95428:-1:exon
so has part: feature:95106-95218:-1:exon
so has part: feature:94710-94827:-1:exon
so has part: feature:93788-93910:-1:exon
so has part: feature:92978-93084:-1:exon
so has part: feature:92102-92188:-1:exon
so has part: feature:89936-90713:-1:exon

position:89936:-1
position: 89936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99122-99200:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:98866-98888:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97514-97565:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:96122-96187:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:95386-95428:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:95106-95218:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:94710-94827:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:93788-93910:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:92978-93084:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:92102-92188:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:89936-90713:-1:exon

LOC103525233
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103525233
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor ISY1 homolog
translation: MARNAEKAMTALARFRQAQLEEGKVKERRPFLASECNELPKAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEFRIKELGGPDYARIGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKSIDAEYYGYRDEDDGILEPLEQEHEKKVIAEAVEKWKKEREARLARGEEEEEEEENIYAVDDESDEESGKDKEGEEGQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLMAQSEEAKTLLGL
SIO_010081: LOC103525233
subclass of: SO_0000673
so part of: LOC103525233
location: complement(join(90606..90713,92102..92188,92978..93084,93788..93910,94710..94827,95106..95218,95386..95428,96122..96187,97514..97565,98866..98888,99122..99124))
location: region:90606-99124:-1
so has part: feature:99122-99124:-1:exon
so has part: feature:98866-98888:-1:exon
so has part: feature:97514-97565:-1:exon
so has part: feature:96122-96187:-1:exon
so has part: feature:95386-95428:-1:exon
so has part: feature:95106-95218:-1:exon
so has part: feature:94710-94827:-1:exon
so has part: feature:93788-93910:-1:exon
so has part: feature:92978-93084:-1:exon
so has part: feature:92102-92188:-1:exon
so has part: feature:90606-90713:-1:exon

XP_030314466.1
type: Protein
SIO_000068: ncbiprotein

position:90606:-1
position: 90606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99124:-1
position: 99124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99122-99124:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:98866-98888:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97514-97565:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:96122-96187:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:95386-95428:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:95106-95218:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:94710-94827:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:93788-93910:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:92978-93084:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:92102-92188:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:90606-90713:-1:exon

LOC103525233
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103525233
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor ISY1 homolog
translation: MARNAEKAMTALARFRQAQLEEGKVKERRPFLASECNELPKAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEFRIKELGGPDYARIGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKSIDAEYYGYRDEDDGILEPLEQEHEKKVIAEAVEKWKKEREARLARGEEEEEEEENIYAVDDESDEESGKDKEGEEGQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLMAQSEEAKTLLGL
SIO_010081: LOC103525233
subclass of: SO_0000673
so part of: LOC103525233
location: complement(join(90606..90713,92102..92188,92978..93084,93788..93910,94710..94827,95106..95218,95386..95428,96122..96187,97514..97565,98866..98888,99122..99124))
location: region:90606-99124:-1
so has part: feature:99122-99124:-1:exon
so has part: feature:98866-98888:-1:exon
so has part: feature:97514-97565:-1:exon
so has part: feature:96122-96187:-1:exon
so has part: feature:95386-95428:-1:exon
so has part: feature:95106-95218:-1:exon
so has part: feature:94710-94827:-1:exon
so has part: feature:93788-93910:-1:exon
so has part: feature:92978-93084:-1:exon
so has part: feature:92102-92188:-1:exon
so has part: feature:90606-90713:-1:exon

XP_030314467.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99122-99124:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:98866-98888:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97514-97565:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:96122-96187:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:95386-95428:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:95106-95218:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:94710-94827:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:93788-93910:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:92978-93084:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:92102-92188:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:90606-90713:-1:exon

CNBP
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: CNBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(100201..109324)
location: region:100201-109324:-1
so has part: feature:100201-109324:-1:exon
subclass of: SO_0000010

103539785
type: Gene
SIO_000068: ncbigene

position:100201:-1
position: 100201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109324:-1
position: 109324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100201-109324:-1:exon

CNBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CNBP
product: CCHC-type zinc finger nucleic acid binding protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 61 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030458243.1
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(100201..101193,102083..102281,102460..102555,102834..102949,109161..109309))
location: region:100201-109309:-1
so has part: feature:109161-109309:-1:exon
so has part: feature:102834-102949:-1:exon
so has part: feature:102460-102555:-1:exon
so has part: feature:102083-102281:-1:exon
so has part: feature:100201-101193:-1:exon

position:109309:-1
position: 109309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109161-109309:-1:exon

position:109161:-1
position: 109161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:102834-102949:-1:exon

position:102834:-1
position: 102834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102949:-1
position: 102949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:102460-102555:-1:exon

position:102460:-1
position: 102460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102555:-1
position: 102555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:102083-102281:-1:exon

position:102083:-1
position: 102083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102281:-1
position: 102281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:100201-101193:-1:exon

position:101193:-1
position: 101193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CNBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CNBP
product: CCHC-type zinc finger nucleic acid binding protein, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 66 ESTs, 1 long SRA read, 13 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030458244.1
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(100204..101193,102083..102281,102460..102552,102834..102949,109161..109324))
location: region:100204-109324:-1
so has part: feature:109161-109324:-1:exon
so has part: feature:102834-102949:-1:exon
so has part: feature:102460-102552:-1:exon
so has part: feature:102083-102281:-1:exon
so has part: feature:100204-101193:-1:exon

position:100204:-1
position: 100204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109161-109324:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:102834-102949:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:102460-102552:-1:exon

position:102552:-1
position: 102552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:102083-102281:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:100204-101193:-1:exon

CNBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CNBP
product: CCHC-type zinc finger nucleic acid binding protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030458242.1
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(100204..101193,102083..102284,102460..102552,102834..102949,109161..109309))
location: region:100204-109309:-1
so has part: feature:109161-109309:-1:exon
so has part: feature:102834-102949:-1:exon
so has part: feature:102460-102552:-1:exon
so has part: feature:102083-102284:-1:exon
so has part: feature:100204-101193:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:109161-109309:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:102834-102949:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:102460-102552:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:102083-102284:-1:exon

position:102284:-1
position: 102284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:100204-101193:-1:exon

CNBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CNBP
product: CCHC-type zinc finger nucleic acid binding protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030458240.1
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(100204..101193,102083..102284,102460..102555,102834..102949,109161..109309))
location: region:100204-109309:-1
so has part: feature:109161-109309:-1:exon
so has part: feature:102834-102949:-1:exon
so has part: feature:102460-102555:-1:exon
so has part: feature:102083-102284:-1:exon
so has part: feature:100204-101193:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:109161-109309:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:102834-102949:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:102460-102555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:102083-102284:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:100204-101193:-1:exon

CNBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CNBP
product: CCHC-type zinc finger nucleic acid binding protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030458241.1
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(100204..101193,102083..102284,102460..102555,102834..102952,109161..109309))
location: region:100204-109309:-1
so has part: feature:109161-109309:-1:exon
so has part: feature:102834-102952:-1:exon
so has part: feature:102460-102555:-1:exon
so has part: feature:102083-102284:-1:exon
so has part: feature:100204-101193:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:109161-109309:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:102834-102952:-1:exon

position:102952:-1
position: 102952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:102460-102555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:102083-102284:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:100204-101193:-1:exon

CNBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CNBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cellular nucleic acid-binding protein isoform X4
translation: MSSNECFKCGRTGHWARECPTGIGRGRGMRSRGRGFQFMSSSLPDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(101076..101193,102083..102281,102460..102552,102834..102936))
location: region:101076-102936:-1
so has part: feature:102834-102936:-1:exon
so has part: feature:102460-102552:-1:exon
so has part: feature:102083-102281:-1:exon
so has part: feature:101076-101193:-1:exon

XP_030314104.1
type: Protein
SIO_000068: ncbiprotein

position:101076:-1
position: 101076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102936:-1
position: 102936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102834-102936:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:102460-102552:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:102083-102281:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:101076-101193:-1:exon

CNBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CNBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cellular nucleic acid-binding protein isoform X2
translation: MSSNECFKCGRTGHWARECPTGIGRGRGMRSRGRGFQFMSSSLPDICYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(101076..101193,102083..102284,102460..102552,102834..102936))
location: region:101076-102936:-1
so has part: feature:102834-102936:-1:exon
so has part: feature:102460-102552:-1:exon
so has part: feature:102083-102284:-1:exon
so has part: feature:101076-101193:-1:exon

XP_030314102.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102834-102936:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:102460-102552:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:102083-102284:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:101076-101193:-1:exon

CNBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CNBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cellular nucleic acid-binding protein isoform X3
translation: MSSNECFKCGRTGHWARECPTGIGRGRGMRSRGRAGFQFMSSSLPDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(101076..101193,102083..102281,102460..102555,102834..102936))
location: region:101076-102936:-1
so has part: feature:102834-102936:-1:exon
so has part: feature:102460-102555:-1:exon
so has part: feature:102083-102281:-1:exon
so has part: feature:101076-101193:-1:exon

XP_030314103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102834-102936:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:102460-102555:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:102083-102281:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:101076-101193:-1:exon

CNBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CNBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cellular nucleic acid-binding protein isoform X1
translation: MSSNECFKCGRTGHWARECPTGIGRGRGMRSRGRAGFQFMSSSLPDICYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(101076..101193,102083..102284,102460..102555,102834..102936))
location: region:101076-102936:-1
so has part: feature:102834-102936:-1:exon
so has part: feature:102460-102555:-1:exon
so has part: feature:102083-102284:-1:exon
so has part: feature:101076-101193:-1:exon

XP_030314100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102834-102936:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:102460-102555:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:102083-102284:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:101076-101193:-1:exon

CNBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CNBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cellular nucleic acid-binding protein isoform X1
translation: MSSNECFKCGRTGHWARECPTGIGRGRGMRSRGRAGFQFMSSSLPDICYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(101076..101193,102083..102284,102460..102555,102834..102936))
location: region:101076-102936:-1
so has part: feature:102834-102936:-1:exon
so has part: feature:102460-102555:-1:exon
so has part: feature:102083-102284:-1:exon
so has part: feature:101076-101193:-1:exon

XP_030314101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102834-102936:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:102460-102555:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:102083-102284:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:101076-101193:-1:exon

LOC115599015
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599015
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 103750..109720
location: region:103750-109720:1
so has part: feature:103750-109720:1:exon
subclass of: SO_0000010

115599015
type: Gene
SIO_000068: ncbigene

position:103750:1
position: 103750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109720:1
position: 109720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103750-109720:1:exon

LOC115599015
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC115599015
product: basic proline-rich protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_030458617.1
SIO_010081: LOC115599015
subclass of: SO_0000673
so part of: LOC115599015
location: join(103750..103799,108291..108470,108559..109720)
location: region:103750-109720:1
so has part: feature:103750-103799:1:exon
so has part: feature:108291-108470:1:exon
so has part: feature:108559-109720:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:103750-103799:1:exon

position:103799:1
position: 103799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:108291-108470:1:exon

position:108291:1
position: 108291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108470:1
position: 108470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:108559-109720:1:exon

position:108559:1
position: 108559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115599015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC115599015
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic proline-rich protein-like
translation: MPETAQTTAFALIGELRSHLDLEQATIRACGRTQAVATPRPSGLRRNLTRGEPRGGPRRHRSATPRSTLAQITKNGDPRSHKLISSPNSLQPLAHGKFLTGPGPHPRAAPGALPLPSPHSRSAARHPHAAAKAGGTRRRNRRARSPGQQAEHPRGGAQPARTARANPPPPQRPGLPSPRAAQAPSAPPETRQGLTHPPPPALAGPAGPRFPLSAAHPLPSALPPTFSPEIPARVPPGRSAPLSRALGQGAPAPSSLRALPSPRPQQLPWRPRPPRRLPADPRPAAALSRAHHSRPGPVRPCSSSLRSSARSLPAPFWLRHTRFAHGPTRSAPGSPRPSLLLCARLAGARPSANGRKVLSRLANRIADRDTQSRTSRKEPGPPPGPPLAGLGRGLLRAAAAPVPEPPWDTRAAPSPPPGWPLRQSKPRCSPQCVGSDRRAGGSGRFAALKPRADPRGTARPAPG
SIO_010081: LOC115599015
subclass of: SO_0000673
so part of: LOC115599015
location: join(103750..103799,108291..108470,108559..109720)
location: region:103750-109720:1
so has part: feature:103750-103799:1:exon
so has part: feature:108291-108470:1:exon
so has part: feature:108559-109720:1:exon

XP_030314477.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103750-103799:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108291-108470:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108559-109720:1:exon

RAF1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: RAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 148288..224079
location: region:148288-224079:1
so has part: feature:148288-224079:1:exon
subclass of: SO_0000010

103539768
type: Gene
SIO_000068: ncbigene

position:148288:1
position: 148288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224079:1
position: 224079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148288-224079:1:exon

RAF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RAF1
product: Raf-1 proto-oncogene, serine/threonine kinase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030458580.1
SIO_010081: RAF1
subclass of: SO_0000673
so part of: RAF1
location: join(148288..148414,148505..148637,199618..199833,200682..200794,201817..201919,203096..203253,204207..204305,205796..205949,207488..207547,209349..209376,209468..209595,210269..210386,214166..214250,215066..215242,216051..216097,217476..217594,219934..220065,221818..221952,222895..224079)
location: region:148288-224079:1
so has part: feature:148288-148414:1:exon
so has part: feature:148505-148637:1:exon
so has part: feature:199618-199833:1:exon
so has part: feature:200682-200794:1:exon
so has part: feature:201817-201919:1:exon
so has part: feature:203096-203253:1:exon
so has part: feature:204207-204305:1:exon
so has part: feature:205796-205949:1:exon
so has part: feature:207488-207547:1:exon
so has part: feature:209349-209376:1:exon
so has part: feature:209468-209595:1:exon
so has part: feature:210269-210386:1:exon
so has part: feature:214166-214250:1:exon
so has part: feature:215066-215242:1:exon
so has part: feature:216051-216097:1:exon
so has part: feature:217476-217594:1:exon
so has part: feature:219934-220065:1:exon
so has part: feature:221818-221952:1:exon
so has part: feature:222895-224079:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:148288-148414:1:exon

position:148414:1
position: 148414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:148505-148637:1:exon

position:148505:1
position: 148505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148637:1
position: 148637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:199618-199833:1:exon

position:199618:1
position: 199618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199833:1
position: 199833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:200682-200794:1:exon

position:200682:1
position: 200682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200794:1
position: 200794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:201817-201919:1:exon

position:201817:1
position: 201817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201919:1
position: 201919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:203096-203253:1:exon

position:203096:1
position: 203096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203253:1
position: 203253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:204207-204305:1:exon

position:204207:1
position: 204207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204305:1
position: 204305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:205796-205949:1:exon

position:205796:1
position: 205796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205949:1
position: 205949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:207488-207547:1:exon

position:207488:1
position: 207488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207547:1
position: 207547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:209349-209376:1:exon

position:209349:1
position: 209349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209376:1
position: 209376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:209468-209595:1:exon

position:209468:1
position: 209468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209595:1
position: 209595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:210269-210386:1:exon

position:210269:1
position: 210269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210386:1
position: 210386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:214166-214250:1:exon

position:214166:1
position: 214166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214250:1
position: 214250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:215066-215242:1:exon

position:215066:1
position: 215066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215242:1
position: 215242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:216051-216097:1:exon

position:216051:1
position: 216051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216097:1
position: 216097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:217476-217594:1:exon

position:217476:1
position: 217476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217594:1
position: 217594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:219934-220065:1:exon

position:219934:1
position: 219934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220065:1
position: 220065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:221818-221952:1:exon

position:221818:1
position: 221818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221952:1
position: 221952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:222895-224079:1:exon

position:222895:1
position: 222895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RAF proto-oncogene serine/threonine-protein kinase isoform X1
translation: MKLLALPFFSSGTHVTSKSSAPGSRTVNPRCPWALGAHILPASGFLLRIAASRDGARRFAGSEKKFQPLTTSMEHIQGAWKTISNGFGLKDSVFDGPNCISPTIVQQFGYQRRASDDGKISDTSKTSNTIRVFLPNKQRTVVNVRNGMTLHDCLMKALKVRGLQPECCAVFRLLTEPKGKKVRLDWNTDAASLIGEELQVDFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPTMCVDWSNIRQLLLFPNSNISDSGVPALPPLTMRRMRESVSRIPVSSQHRYSTPHAFTFNTSNPSSEGSLSQRQRSTSTPNVHMVSTTMPVDSRIIENNSLNASPSSWCRRFCLRGRDAIRSHGESASPSALSGSPNNMSPTGWSQPKTPVPAQRERAPGSNTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRMQDSNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCLKKVREERPLFPQILSSIELLQHSLPKINRSASEPSLHRAAHTEDINSCTLTSTRLPVF
SIO_010081: RAF1
subclass of: SO_0000673
so part of: RAF1
location: join(148341..148414,148505..148637,199618..199833,200682..200794,201817..201919,203096..203253,204207..204305,205796..205949,207488..207547,209349..209376,209468..209595,210269..210386,214166..214250,215066..215242,216051..216097,217476..217594,219934..220065,221818..221952,222895..223035)
location: region:148341-223035:1
so has part: feature:148341-148414:1:exon
so has part: feature:148505-148637:1:exon
so has part: feature:199618-199833:1:exon
so has part: feature:200682-200794:1:exon
so has part: feature:201817-201919:1:exon
so has part: feature:203096-203253:1:exon
so has part: feature:204207-204305:1:exon
so has part: feature:205796-205949:1:exon
so has part: feature:207488-207547:1:exon
so has part: feature:209349-209376:1:exon
so has part: feature:209468-209595:1:exon
so has part: feature:210269-210386:1:exon
so has part: feature:214166-214250:1:exon
so has part: feature:215066-215242:1:exon
so has part: feature:216051-216097:1:exon
so has part: feature:217476-217594:1:exon
so has part: feature:219934-220065:1:exon
so has part: feature:221818-221952:1:exon
so has part: feature:222895-223035:1:exon

XP_030314440.1
type: Protein
SIO_000068: ncbiprotein

position:148341:1
position: 148341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223035:1
position: 223035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148341-148414:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:148505-148637:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:199618-199833:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200682-200794:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:201817-201919:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:203096-203253:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:204207-204305:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:205796-205949:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:207488-207547:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:209349-209376:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:209468-209595:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:210269-210386:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:214166-214250:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:215066-215242:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:216051-216097:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:217476-217594:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:219934-220065:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:221818-221952:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:222895-223035:1:exon

RAF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RAF1
product: Raf-1 proto-oncogene, serine/threonine kinase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030458582.1
SIO_010081: RAF1
subclass of: SO_0000673
so part of: RAF1
location: join(148388..148637,191652..191707,199618..199833,200682..200794,201817..201919,203096..203253,204207..204305,205796..205949,207488..207547,209349..209376,209468..209595,210269..210386,214166..214250,215066..215242,216051..216097,217476..217594,219934..220065,221818..221952,222895..224079)
location: region:148388-224079:1
so has part: feature:148388-148637:1:exon
so has part: feature:191652-191707:1:exon
so has part: feature:199618-199833:1:exon
so has part: feature:200682-200794:1:exon
so has part: feature:201817-201919:1:exon
so has part: feature:203096-203253:1:exon
so has part: feature:204207-204305:1:exon
so has part: feature:205796-205949:1:exon
so has part: feature:207488-207547:1:exon
so has part: feature:209349-209376:1:exon
so has part: feature:209468-209595:1:exon
so has part: feature:210269-210386:1:exon
so has part: feature:214166-214250:1:exon
so has part: feature:215066-215242:1:exon
so has part: feature:216051-216097:1:exon
so has part: feature:217476-217594:1:exon
so has part: feature:219934-220065:1:exon
so has part: feature:221818-221952:1:exon
so has part: feature:222895-224079:1:exon

position:148388:1
position: 148388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148388-148637:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:191652-191707:1:exon

position:191652:1
position: 191652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191707:1
position: 191707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:199618-199833:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200682-200794:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:201817-201919:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:203096-203253:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:204207-204305:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:205796-205949:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:207488-207547:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:209349-209376:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:209468-209595:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:210269-210386:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:214166-214250:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:215066-215242:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:216051-216097:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:217476-217594:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:219934-220065:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:221818-221952:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:222895-224079:1:exon

LOC115599014
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599014
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(156781..181109)
location: region:156781-181109:-1
so has part: feature:156781-181109:-1:exon
subclass of: SO_0000011

115599014
type: Gene
SIO_000068: ncbigene

position:156781:-1
position: 156781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181109:-1
position: 181109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156781-181109:-1:exon

LOC115599014
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599014
product: uncharacterized LOC115599014, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988080.1
SIO_010081: LOC115599014
subclass of: SO_0000673
so part of: LOC115599014
location: complement(join(156781..158626,163394..163513,178175..178279,180323..181109))
location: region:156781-181109:-1
so has part: feature:180323-181109:-1:exon
so has part: feature:178175-178279:-1:exon
so has part: feature:163394-163513:-1:exon
so has part: feature:156781-158626:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:180323-181109:-1:exon

position:180323:-1
position: 180323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:178175-178279:-1:exon

position:178175:-1
position: 178175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178279:-1
position: 178279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:163394-163513:-1:exon

position:163394:-1
position: 163394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163513:-1
position: 163513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:156781-158626:-1:exon

position:158626:-1
position: 158626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115599014
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599014
product: uncharacterized LOC115599014, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988081.1
SIO_010081: LOC115599014
subclass of: SO_0000673
so part of: LOC115599014
location: complement(join(156781..157754,158659..158732,163394..163513,178175..178279,180323..181109))
location: region:156781-181109:-1
so has part: feature:180323-181109:-1:exon
so has part: feature:178175-178279:-1:exon
so has part: feature:163394-163513:-1:exon
so has part: feature:158659-158732:-1:exon
so has part: feature:156781-157754:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:180323-181109:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:178175-178279:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:163394-163513:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:158659-158732:-1:exon

position:158659:-1
position: 158659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158732:-1
position: 158732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:156781-157754:-1:exon

position:157754:-1
position: 157754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115599014
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599014
product: uncharacterized LOC115599014, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988082.1
SIO_010081: LOC115599014
subclass of: SO_0000673
so part of: LOC115599014
location: complement(join(156781..157754,157859..157888,158659..158732,163394..163513,178175..178279,180323..181109))
location: region:156781-181109:-1
so has part: feature:180323-181109:-1:exon
so has part: feature:178175-178279:-1:exon
so has part: feature:163394-163513:-1:exon
so has part: feature:158659-158732:-1:exon
so has part: feature:157859-157888:-1:exon
so has part: feature:156781-157754:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:180323-181109:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:178175-178279:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:163394-163513:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:158659-158732:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:157859-157888:-1:exon

position:157859:-1
position: 157859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157888:-1
position: 157888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:156781-157754:-1:exon

RAF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RAF1
product: Raf-1 proto-oncogene, serine/threonine kinase, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 7 ESTs, 1 long SRA read, 36 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_030458585.1
SIO_010081: RAF1
subclass of: SO_0000673
so part of: RAF1
location: join(181119..181251,191652..191707,199618..199833,200682..200794,201817..201919,203096..203253,204207..204305,205796..205949,209349..209376,209468..209595,210269..210386,214166..214250,215066..215242,216051..216097,217476..217594,219934..220065,221818..221952,222895..224079)
location: region:181119-224079:1
so has part: feature:181119-181251:1:exon
so has part: feature:191652-191707:1:exon
so has part: feature:199618-199833:1:exon
so has part: feature:200682-200794:1:exon
so has part: feature:201817-201919:1:exon
so has part: feature:203096-203253:1:exon
so has part: feature:204207-204305:1:exon
so has part: feature:205796-205949:1:exon
so has part: feature:209349-209376:1:exon
so has part: feature:209468-209595:1:exon
so has part: feature:210269-210386:1:exon
so has part: feature:214166-214250:1:exon
so has part: feature:215066-215242:1:exon
so has part: feature:216051-216097:1:exon
so has part: feature:217476-217594:1:exon
so has part: feature:219934-220065:1:exon
so has part: feature:221818-221952:1:exon
so has part: feature:222895-224079:1:exon

position:181119:1
position: 181119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181119-181251:1:exon

position:181251:1
position: 181251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:191652-191707:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:199618-199833:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200682-200794:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:201817-201919:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:203096-203253:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:204207-204305:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:205796-205949:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:209349-209376:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:209468-209595:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:210269-210386:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:214166-214250:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:215066-215242:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:216051-216097:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:217476-217594:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:219934-220065:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:221818-221952:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:222895-224079:1:exon

RAF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RAF1
product: Raf-1 proto-oncogene, serine/threonine kinase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030458583.1
SIO_010081: RAF1
subclass of: SO_0000673
so part of: RAF1
location: join(181163..181251,199618..199833,200682..200794,201817..201919,203096..203253,204207..204305,205796..205949,207488..207547,209349..209376,209468..209595,210269..210386,214166..214250,215066..215242,216051..216097,217476..217594,219934..220065,221818..221952,222895..224079)
location: region:181163-224079:1
so has part: feature:181163-181251:1:exon
so has part: feature:199618-199833:1:exon
so has part: feature:200682-200794:1:exon
so has part: feature:201817-201919:1:exon
so has part: feature:203096-203253:1:exon
so has part: feature:204207-204305:1:exon
so has part: feature:205796-205949:1:exon
so has part: feature:207488-207547:1:exon
so has part: feature:209349-209376:1:exon
so has part: feature:209468-209595:1:exon
so has part: feature:210269-210386:1:exon
so has part: feature:214166-214250:1:exon
so has part: feature:215066-215242:1:exon
so has part: feature:216051-216097:1:exon
so has part: feature:217476-217594:1:exon
so has part: feature:219934-220065:1:exon
so has part: feature:221818-221952:1:exon
so has part: feature:222895-224079:1:exon

position:181163:1
position: 181163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181163-181251:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:199618-199833:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:200682-200794:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:201817-201919:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:203096-203253:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:204207-204305:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:205796-205949:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:207488-207547:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:209349-209376:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:209468-209595:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:210269-210386:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:214166-214250:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:215066-215242:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:216051-216097:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:217476-217594:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:219934-220065:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:221818-221952:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:222895-224079:1:exon

RAF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RAF1
product: Raf-1 proto-oncogene, serine/threonine kinase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030458581.1
SIO_010081: RAF1
subclass of: SO_0000673
so part of: RAF1
location: join(181167..181251,191652..191707,199618..199833,200682..200794,201817..201919,203096..203253,204207..204305,205796..205949,207488..207547,209349..209376,209468..209595,210269..210386,214166..214250,215066..215242,216051..216097,217476..217594,219934..220065,221818..221952,222895..224079)
location: region:181167-224079:1
so has part: feature:181167-181251:1:exon
so has part: feature:191652-191707:1:exon
so has part: feature:199618-199833:1:exon
so has part: feature:200682-200794:1:exon
so has part: feature:201817-201919:1:exon
so has part: feature:203096-203253:1:exon
so has part: feature:204207-204305:1:exon
so has part: feature:205796-205949:1:exon
so has part: feature:207488-207547:1:exon
so has part: feature:209349-209376:1:exon
so has part: feature:209468-209595:1:exon
so has part: feature:210269-210386:1:exon
so has part: feature:214166-214250:1:exon
so has part: feature:215066-215242:1:exon
so has part: feature:216051-216097:1:exon
so has part: feature:217476-217594:1:exon
so has part: feature:219934-220065:1:exon
so has part: feature:221818-221952:1:exon
so has part: feature:222895-224079:1:exon

position:181167:1
position: 181167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181167-181251:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:191652-191707:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:199618-199833:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200682-200794:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:201817-201919:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:203096-203253:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:204207-204305:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:205796-205949:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:207488-207547:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:209349-209376:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:209468-209595:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:210269-210386:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:214166-214250:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:215066-215242:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:216051-216097:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:217476-217594:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:219934-220065:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:221818-221952:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:222895-224079:1:exon

RAF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RAF1
product: Raf-1 proto-oncogene, serine/threonine kinase, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030458584.1
SIO_010081: RAF1
subclass of: SO_0000673
so part of: RAF1
location: join(195826..195883,199618..199833,200682..200794,201817..201919,203096..203253,204207..204305,205796..205949,207488..207547,209349..209376,209468..209595,210269..210386,214166..214250,215066..215242,216051..216097,217476..217594,219934..220065,221818..221952,222895..224079)
location: region:195826-224079:1
so has part: feature:195826-195883:1:exon
so has part: feature:199618-199833:1:exon
so has part: feature:200682-200794:1:exon
so has part: feature:201817-201919:1:exon
so has part: feature:203096-203253:1:exon
so has part: feature:204207-204305:1:exon
so has part: feature:205796-205949:1:exon
so has part: feature:207488-207547:1:exon
so has part: feature:209349-209376:1:exon
so has part: feature:209468-209595:1:exon
so has part: feature:210269-210386:1:exon
so has part: feature:214166-214250:1:exon
so has part: feature:215066-215242:1:exon
so has part: feature:216051-216097:1:exon
so has part: feature:217476-217594:1:exon
so has part: feature:219934-220065:1:exon
so has part: feature:221818-221952:1:exon
so has part: feature:222895-224079:1:exon

position:195826:1
position: 195826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195826-195883:1:exon

position:195883:1
position: 195883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:199618-199833:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:200682-200794:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:201817-201919:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:203096-203253:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:204207-204305:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:205796-205949:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:207488-207547:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:209349-209376:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:209468-209595:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:210269-210386:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:214166-214250:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:215066-215242:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:216051-216097:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:217476-217594:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:219934-220065:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:221818-221952:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:222895-224079:1:exon

RAF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RAF proto-oncogene serine/threonine-protein kinase isoform X2
translation: MEHIQGAWKTISNGFGLKDSVFDGPNCISPTIVQQFGYQRRASDDGKISDTSKTSNTIRVFLPNKQRTVVNVRNGMTLHDCLMKALKVRGLQPECCAVFRLLTEPKGKKVRLDWNTDAASLIGEELQVDFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPTMCVDWSNIRQLLLFPNSNISDSGVPALPPLTMRRMRESVSRIPVSSQHRYSTPHAFTFNTSNPSSEGSLSQRQRSTSTPNVHMVSTTMPVDSRIIENNSLNASPSSWCRRFCLRGRDAIRSHGESASPSALSGSPNNMSPTGWSQPKTPVPAQRERAPGSNTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRMQDSNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCLKKVREERPLFPQILSSIELLQHSLPKINRSASEPSLHRAAHTEDINSCTLTSTRLPVF
SIO_010081: RAF1
subclass of: SO_0000673
so part of: RAF1
location: join(199627..199833,200682..200794,201817..201919,203096..203253,204207..204305,205796..205949,207488..207547,209349..209376,209468..209595,210269..210386,214166..214250,215066..215242,216051..216097,217476..217594,219934..220065,221818..221952,222895..223035)
location: region:199627-223035:1
so has part: feature:199627-199833:1:exon
so has part: feature:200682-200794:1:exon
so has part: feature:201817-201919:1:exon
so has part: feature:203096-203253:1:exon
so has part: feature:204207-204305:1:exon
so has part: feature:205796-205949:1:exon
so has part: feature:207488-207547:1:exon
so has part: feature:209349-209376:1:exon
so has part: feature:209468-209595:1:exon
so has part: feature:210269-210386:1:exon
so has part: feature:214166-214250:1:exon
so has part: feature:215066-215242:1:exon
so has part: feature:216051-216097:1:exon
so has part: feature:217476-217594:1:exon
so has part: feature:219934-220065:1:exon
so has part: feature:221818-221952:1:exon
so has part: feature:222895-223035:1:exon

XP_030314441.1
type: Protein
SIO_000068: ncbiprotein

position:199627:1
position: 199627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199627-199833:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200682-200794:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:201817-201919:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:203096-203253:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:204207-204305:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205796-205949:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:207488-207547:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:209349-209376:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:209468-209595:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:210269-210386:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:214166-214250:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:215066-215242:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:216051-216097:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:217476-217594:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:219934-220065:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:221818-221952:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:222895-223035:1:exon

RAF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RAF proto-oncogene serine/threonine-protein kinase isoform X2
translation: MEHIQGAWKTISNGFGLKDSVFDGPNCISPTIVQQFGYQRRASDDGKISDTSKTSNTIRVFLPNKQRTVVNVRNGMTLHDCLMKALKVRGLQPECCAVFRLLTEPKGKKVRLDWNTDAASLIGEELQVDFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPTMCVDWSNIRQLLLFPNSNISDSGVPALPPLTMRRMRESVSRIPVSSQHRYSTPHAFTFNTSNPSSEGSLSQRQRSTSTPNVHMVSTTMPVDSRIIENNSLNASPSSWCRRFCLRGRDAIRSHGESASPSALSGSPNNMSPTGWSQPKTPVPAQRERAPGSNTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRMQDSNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCLKKVREERPLFPQILSSIELLQHSLPKINRSASEPSLHRAAHTEDINSCTLTSTRLPVF
SIO_010081: RAF1
subclass of: SO_0000673
so part of: RAF1
location: join(199627..199833,200682..200794,201817..201919,203096..203253,204207..204305,205796..205949,207488..207547,209349..209376,209468..209595,210269..210386,214166..214250,215066..215242,216051..216097,217476..217594,219934..220065,221818..221952,222895..223035)
location: region:199627-223035:1
so has part: feature:199627-199833:1:exon
so has part: feature:200682-200794:1:exon
so has part: feature:201817-201919:1:exon
so has part: feature:203096-203253:1:exon
so has part: feature:204207-204305:1:exon
so has part: feature:205796-205949:1:exon
so has part: feature:207488-207547:1:exon
so has part: feature:209349-209376:1:exon
so has part: feature:209468-209595:1:exon
so has part: feature:210269-210386:1:exon
so has part: feature:214166-214250:1:exon
so has part: feature:215066-215242:1:exon
so has part: feature:216051-216097:1:exon
so has part: feature:217476-217594:1:exon
so has part: feature:219934-220065:1:exon
so has part: feature:221818-221952:1:exon
so has part: feature:222895-223035:1:exon

XP_030314442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199627-199833:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200682-200794:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:201817-201919:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:203096-203253:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:204207-204305:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205796-205949:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:207488-207547:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:209349-209376:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:209468-209595:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:210269-210386:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:214166-214250:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:215066-215242:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:216051-216097:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:217476-217594:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:219934-220065:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:221818-221952:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:222895-223035:1:exon

RAF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RAF proto-oncogene serine/threonine-protein kinase isoform X2
translation: MEHIQGAWKTISNGFGLKDSVFDGPNCISPTIVQQFGYQRRASDDGKISDTSKTSNTIRVFLPNKQRTVVNVRNGMTLHDCLMKALKVRGLQPECCAVFRLLTEPKGKKVRLDWNTDAASLIGEELQVDFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPTMCVDWSNIRQLLLFPNSNISDSGVPALPPLTMRRMRESVSRIPVSSQHRYSTPHAFTFNTSNPSSEGSLSQRQRSTSTPNVHMVSTTMPVDSRIIENNSLNASPSSWCRRFCLRGRDAIRSHGESASPSALSGSPNNMSPTGWSQPKTPVPAQRERAPGSNTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRMQDSNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCLKKVREERPLFPQILSSIELLQHSLPKINRSASEPSLHRAAHTEDINSCTLTSTRLPVF
SIO_010081: RAF1
subclass of: SO_0000673
so part of: RAF1
location: join(199627..199833,200682..200794,201817..201919,203096..203253,204207..204305,205796..205949,207488..207547,209349..209376,209468..209595,210269..210386,214166..214250,215066..215242,216051..216097,217476..217594,219934..220065,221818..221952,222895..223035)
location: region:199627-223035:1
so has part: feature:199627-199833:1:exon
so has part: feature:200682-200794:1:exon
so has part: feature:201817-201919:1:exon
so has part: feature:203096-203253:1:exon
so has part: feature:204207-204305:1:exon
so has part: feature:205796-205949:1:exon
so has part: feature:207488-207547:1:exon
so has part: feature:209349-209376:1:exon
so has part: feature:209468-209595:1:exon
so has part: feature:210269-210386:1:exon
so has part: feature:214166-214250:1:exon
so has part: feature:215066-215242:1:exon
so has part: feature:216051-216097:1:exon
so has part: feature:217476-217594:1:exon
so has part: feature:219934-220065:1:exon
so has part: feature:221818-221952:1:exon
so has part: feature:222895-223035:1:exon

XP_030314443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199627-199833:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200682-200794:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:201817-201919:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:203096-203253:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:204207-204305:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205796-205949:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:207488-207547:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:209349-209376:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:209468-209595:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:210269-210386:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:214166-214250:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:215066-215242:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:216051-216097:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:217476-217594:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:219934-220065:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:221818-221952:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:222895-223035:1:exon

RAF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RAF proto-oncogene serine/threonine-protein kinase isoform X2
translation: MEHIQGAWKTISNGFGLKDSVFDGPNCISPTIVQQFGYQRRASDDGKISDTSKTSNTIRVFLPNKQRTVVNVRNGMTLHDCLMKALKVRGLQPECCAVFRLLTEPKGKKVRLDWNTDAASLIGEELQVDFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPTMCVDWSNIRQLLLFPNSNISDSGVPALPPLTMRRMRESVSRIPVSSQHRYSTPHAFTFNTSNPSSEGSLSQRQRSTSTPNVHMVSTTMPVDSRIIENNSLNASPSSWCRRFCLRGRDAIRSHGESASPSALSGSPNNMSPTGWSQPKTPVPAQRERAPGSNTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRMQDSNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCLKKVREERPLFPQILSSIELLQHSLPKINRSASEPSLHRAAHTEDINSCTLTSTRLPVF
SIO_010081: RAF1
subclass of: SO_0000673
so part of: RAF1
location: join(199627..199833,200682..200794,201817..201919,203096..203253,204207..204305,205796..205949,207488..207547,209349..209376,209468..209595,210269..210386,214166..214250,215066..215242,216051..216097,217476..217594,219934..220065,221818..221952,222895..223035)
location: region:199627-223035:1
so has part: feature:199627-199833:1:exon
so has part: feature:200682-200794:1:exon
so has part: feature:201817-201919:1:exon
so has part: feature:203096-203253:1:exon
so has part: feature:204207-204305:1:exon
so has part: feature:205796-205949:1:exon
so has part: feature:207488-207547:1:exon
so has part: feature:209349-209376:1:exon
so has part: feature:209468-209595:1:exon
so has part: feature:210269-210386:1:exon
so has part: feature:214166-214250:1:exon
so has part: feature:215066-215242:1:exon
so has part: feature:216051-216097:1:exon
so has part: feature:217476-217594:1:exon
so has part: feature:219934-220065:1:exon
so has part: feature:221818-221952:1:exon
so has part: feature:222895-223035:1:exon

XP_030314444.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199627-199833:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200682-200794:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:201817-201919:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:203096-203253:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:204207-204305:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205796-205949:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:207488-207547:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:209349-209376:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:209468-209595:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:210269-210386:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:214166-214250:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:215066-215242:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:216051-216097:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:217476-217594:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:219934-220065:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:221818-221952:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:222895-223035:1:exon

RAF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RAF proto-oncogene serine/threonine-protein kinase isoform X3
translation: MEHIQGAWKTISNGFGLKDSVFDGPNCISPTIVQQFGYQRRASDDGKISDTSKTSNTIRVFLPNKQRTVVNVRNGMTLHDCLMKALKVRGLQPECCAVFRLLTEPKGKKVRLDWNTDAASLIGEELQVDFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPTMCVDWSNIRQLLLFPNSNISDSGVPALPPLTMRRMRESVSRIPVSSQHRYSTPHAFTFNTSNPSSEGSLSQRQRSTSTPNVHMVSTTMPVDSRIIEDAIRSHGESASPSALSGSPNNMSPTGWSQPKTPVPAQRERAPGSNTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRMQDSNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCLKKVREERPLFPQILSSIELLQHSLPKINRSASEPSLHRAAHTEDINSCTLTSTRLPVF
SIO_010081: RAF1
subclass of: SO_0000673
so part of: RAF1
location: join(199627..199833,200682..200794,201817..201919,203096..203253,204207..204305,205796..205949,209349..209376,209468..209595,210269..210386,214166..214250,215066..215242,216051..216097,217476..217594,219934..220065,221818..221952,222895..223035)
location: region:199627-223035:1
so has part: feature:199627-199833:1:exon
so has part: feature:200682-200794:1:exon
so has part: feature:201817-201919:1:exon
so has part: feature:203096-203253:1:exon
so has part: feature:204207-204305:1:exon
so has part: feature:205796-205949:1:exon
so has part: feature:209349-209376:1:exon
so has part: feature:209468-209595:1:exon
so has part: feature:210269-210386:1:exon
so has part: feature:214166-214250:1:exon
so has part: feature:215066-215242:1:exon
so has part: feature:216051-216097:1:exon
so has part: feature:217476-217594:1:exon
so has part: feature:219934-220065:1:exon
so has part: feature:221818-221952:1:exon
so has part: feature:222895-223035:1:exon

XP_030314445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:199627-199833:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200682-200794:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:201817-201919:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:203096-203253:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:204207-204305:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205796-205949:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:209349-209376:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:209468-209595:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:210269-210386:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:214166-214250:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:215066-215242:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:216051-216097:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:217476-217594:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:219934-220065:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:221818-221952:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:222895-223035:1:exon

MKRN2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: MKRN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(226644..237912)
location: region:226644-237912:-1
so has part: feature:226644-237912:-1:exon
subclass of: SO_0000010

103539759
type: Gene
SIO_000068: ncbigene

position:226644:-1
position: 226644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237912:-1
position: 237912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226644-237912:-1:exon

MKRN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MKRN2
product: makorin ring finger protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 5 long SRA reads, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030458586.1
SIO_010081: MKRN2
subclass of: SO_0000673
so part of: MKRN2
location: complement(join(226644..227944,229538..229682,231407..231517,232836..233050,234311..234615,235602..235780,237061..237189,237743..237912))
location: region:226644-237912:-1
so has part: feature:237743-237912:-1:exon
so has part: feature:237061-237189:-1:exon
so has part: feature:235602-235780:-1:exon
so has part: feature:234311-234615:-1:exon
so has part: feature:232836-233050:-1:exon
so has part: feature:231407-231517:-1:exon
so has part: feature:229538-229682:-1:exon
so has part: feature:226644-227944:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:237743-237912:-1:exon

position:237743:-1
position: 237743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:237061-237189:-1:exon

position:237061:-1
position: 237061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237189:-1
position: 237189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:235602-235780:-1:exon

position:235602:-1
position: 235602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235780:-1
position: 235780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:234311-234615:-1:exon

position:234311:-1
position: 234311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234615:-1
position: 234615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:232836-233050:-1:exon

position:232836:-1
position: 232836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233050:-1
position: 233050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:231407-231517:-1:exon

position:231407:-1
position: 231407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231517:-1
position: 231517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:229538-229682:-1:exon

position:229538:-1
position: 229538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229682:-1
position: 229682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:226644-227944:-1:exon

position:227944:-1
position: 227944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MKRN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MKRN2
product: makorin ring finger protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030458587.1
SIO_010081: MKRN2
subclass of: SO_0000673
so part of: MKRN2
location: complement(join(226644..227944,229538..229682,231407..231517,232836..233050,234311..234615,235602..235780,237061..237189,237754..237908))
location: region:226644-237908:-1
so has part: feature:237754-237908:-1:exon
so has part: feature:237061-237189:-1:exon
so has part: feature:235602-235780:-1:exon
so has part: feature:234311-234615:-1:exon
so has part: feature:232836-233050:-1:exon
so has part: feature:231407-231517:-1:exon
so has part: feature:229538-229682:-1:exon
so has part: feature:226644-227944:-1:exon

position:237908:-1
position: 237908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237754-237908:-1:exon

position:237754:-1
position: 237754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:237061-237189:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235602-235780:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:234311-234615:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:232836-233050:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:231407-231517:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:229538-229682:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:226644-227944:-1:exon

MKRN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MKRN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable E3 ubiquitin-protein ligase makorin-2 isoform X1
translation: MSTKQVTCRYYMQGVCREGSKCLFSHDLATSKSSTICKYYQKGQCAYGARCRYDHTRLPASGGAAAPAPPALSSAALQTPRQHPQPGAPIPRSRLQESGKRERKTLVLRDRNLCGSSEEKQKGSVSSEVLPCSEQDDSLALKPHSYLEAICSGLEEAVGGRSCPEGEQLCPYAAAGACHFGERCPYLHGDLCEICGLQVLHPFDQEQRKAHEMMCMATFEHDMEKAFAFQASQDKVCSICMEVVYEKPSASERRFGILSNCNHTYCLSCIRQWRCAKQFENPVIKACPECRVISEFVIPSAYWVEDQEKKNELIEAFKQGVGKKPCKYFEQGKGTCPFGGKCLYLHAYPDGTRAEPEKPRKQLSSEGTVRFFNSVRLWDFIEDRESRTVSSTDDEVTDLGELFMHLSGADDDSATSQ
SIO_010081: MKRN2
subclass of: SO_0000673
so part of: MKRN2
location: complement(join(227801..227944,229538..229682,231407..231517,232836..233050,234311..234615,235602..235780,237061..237189,237743..237768))
location: region:227801-237768:-1
so has part: feature:237743-237768:-1:exon
so has part: feature:237061-237189:-1:exon
so has part: feature:235602-235780:-1:exon
so has part: feature:234311-234615:-1:exon
so has part: feature:232836-233050:-1:exon
so has part: feature:231407-231517:-1:exon
so has part: feature:229538-229682:-1:exon
so has part: feature:227801-227944:-1:exon

XP_030314446.1
type: Protein
SIO_000068: ncbiprotein

position:227801:-1
position: 227801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237768:-1
position: 237768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237743-237768:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237061-237189:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235602-235780:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:234311-234615:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:232836-233050:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:231407-231517:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:229538-229682:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:227801-227944:-1:exon

MKRN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MKRN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable E3 ubiquitin-protein ligase makorin-2 isoform X2
translation: MQGVCREGSKCLFSHDLATSKSSTICKYYQKGQCAYGARCRYDHTRLPASGGAAAPAPPALSSAALQTPRQHPQPGAPIPRSRLQESGKRERKTLVLRDRNLCGSSEEKQKGSVSSEVLPCSEQDDSLALKPHSYLEAICSGLEEAVGGRSCPEGEQLCPYAAAGACHFGERCPYLHGDLCEICGLQVLHPFDQEQRKAHEMMCMATFEHDMEKAFAFQASQDKVCSICMEVVYEKPSASERRFGILSNCNHTYCLSCIRQWRCAKQFENPVIKACPECRVISEFVIPSAYWVEDQEKKNELIEAFKQGVGKKPCKYFEQGKGTCPFGGKCLYLHAYPDGTRAEPEKPRKQLSSEGTVRFFNSVRLWDFIEDRESRTVSSTDDEVTDLGELFMHLSGADDDSATSQ
SIO_010081: MKRN2
subclass of: SO_0000673
so part of: MKRN2
location: complement(join(227801..227944,229538..229682,231407..231517,232836..233050,234311..234615,235602..235780,237061..237182))
location: region:227801-237182:-1
so has part: feature:237061-237182:-1:exon
so has part: feature:235602-235780:-1:exon
so has part: feature:234311-234615:-1:exon
so has part: feature:232836-233050:-1:exon
so has part: feature:231407-231517:-1:exon
so has part: feature:229538-229682:-1:exon
so has part: feature:227801-227944:-1:exon

XP_030314447.1
type: Protein
SIO_000068: ncbiprotein

position:237182:-1
position: 237182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237061-237182:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:235602-235780:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:234311-234615:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:232836-233050:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:231407-231517:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:229538-229682:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227801-227944:-1:exon

MKRN2OS
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: MKRN2OS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 237980..242256
location: region:237980-242256:1
so has part: feature:237980-242256:1:exon
subclass of: SO_0000010

103525222
type: Gene
SIO_000068: ncbigene

position:237980:1
position: 237980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242256:1
position: 242256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237980-242256:1:exon

MKRN2OS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MKRN2OS
product: MKRN2 opposite strand
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030458726.1
SIO_010081: MKRN2OS
subclass of: SO_0000673
so part of: MKRN2OS
location: join(237980..238182,238595..238644,239326..239488,241543..242256)
location: region:237980-242256:1
so has part: feature:237980-238182:1:exon
so has part: feature:238595-238644:1:exon
so has part: feature:239326-239488:1:exon
so has part: feature:241543-242256:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:237980-238182:1:exon

position:238182:1
position: 238182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:238595-238644:1:exon

position:238595:1
position: 238595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238644:1
position: 238644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:239326-239488:1:exon

position:239326:1
position: 239326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239488:1
position: 239488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:241543-242256:1:exon

position:241543:1
position: 241543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MKRN2OS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MKRN2OS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MKRN2 opposite strand protein
translation: MAESGVVRVRHCGSAIFCRRTPRHCPLCGRPLPAGLSQAPQRLPSPLRDTAPRSPALLITPTRGTFLRGYDGNSDLHVGITNRKGVVYHYNQEGIHRSETGWEQCISIPLVQPDMLGLLQQWDQLLEDFSVGEAWLPHRYEEQEHNCFTFALGFINSILAAQGKEQMSKSEFTEKFVIPQTRKASKYITLQQQLTANEFYIVPLPEEEKVAEKDVLLH
SIO_010081: MKRN2OS
subclass of: SO_0000673
so part of: MKRN2OS
location: join(237980..238182,238595..238644,239326..239488,241543..241783)
location: region:237980-241783:1
so has part: feature:237980-238182:1:exon
so has part: feature:238595-238644:1:exon
so has part: feature:239326-239488:1:exon
so has part: feature:241543-241783:1:exon

XP_030314586.1
type: Protein
SIO_000068: ncbiprotein

position:241783:1
position: 241783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237980-238182:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:238595-238644:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:239326-239488:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:241543-241783:1:exon

TSEN2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: TSEN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(245575..256854)
location: region:245575-256854:-1
so has part: feature:245575-256854:-1:exon
subclass of: SO_0000010

103539748
type: Gene
SIO_000068: ncbigene

position:245575:-1
position: 245575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256854:-1
position: 256854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245575-256854:-1:exon

TSEN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TSEN2
product: tRNA splicing endonuclease subunit 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030458375.1
SIO_010081: TSEN2
subclass of: SO_0000673
so part of: TSEN2
location: complement(join(245575..245867,246321..246410,246974..247085,247726..247762,250579..250717,251367..251417,251976..252053,252170..252692,254448..254484,254886..254967,255780..255975,256675..256739))
location: region:245575-256739:-1
so has part: feature:256675-256739:-1:exon
so has part: feature:255780-255975:-1:exon
so has part: feature:254886-254967:-1:exon
so has part: feature:254448-254484:-1:exon
so has part: feature:252170-252692:-1:exon
so has part: feature:251976-252053:-1:exon
so has part: feature:251367-251417:-1:exon
so has part: feature:250579-250717:-1:exon
so has part: feature:247726-247762:-1:exon
so has part: feature:246974-247085:-1:exon
so has part: feature:246321-246410:-1:exon
so has part: feature:245575-245867:-1:exon

position:256739:-1
position: 256739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256675-256739:-1:exon

position:256675:-1
position: 256675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:255780-255975:-1:exon

position:255780:-1
position: 255780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255975:-1
position: 255975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:254886-254967:-1:exon

position:254886:-1
position: 254886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254967:-1
position: 254967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:254448-254484:-1:exon

position:254448:-1
position: 254448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254484:-1
position: 254484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:252170-252692:-1:exon

position:252170:-1
position: 252170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252692:-1
position: 252692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:251976-252053:-1:exon

position:251976:-1
position: 251976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252053:-1
position: 252053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:251367-251417:-1:exon

position:251367:-1
position: 251367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251417:-1
position: 251417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:250579-250717:-1:exon

position:250579:-1
position: 250579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250717:-1
position: 250717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:247726-247762:-1:exon

position:247726:-1
position: 247726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247762:-1
position: 247762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:246974-247085:-1:exon

position:246974:-1
position: 246974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247085:-1
position: 247085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:246321-246410:-1:exon

position:246321:-1
position: 246321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246410:-1
position: 246410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:245575-245867:-1:exon

position:245867:-1
position: 245867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TSEN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TSEN2
product: tRNA splicing endonuclease subunit 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030458377.1
SIO_010081: TSEN2
subclass of: SO_0000673
so part of: TSEN2
location: complement(join(245575..245867,246321..246410,246974..247085,247726..247762,250579..250717,251367..251417,251976..252053,252170..252692,254448..254484,254886..254967,255780..255975,256656..256715))
location: region:245575-256715:-1
so has part: feature:256656-256715:-1:exon
so has part: feature:255780-255975:-1:exon
so has part: feature:254886-254967:-1:exon
so has part: feature:254448-254484:-1:exon
so has part: feature:252170-252692:-1:exon
so has part: feature:251976-252053:-1:exon
so has part: feature:251367-251417:-1:exon
so has part: feature:250579-250717:-1:exon
so has part: feature:247726-247762:-1:exon
so has part: feature:246974-247085:-1:exon
so has part: feature:246321-246410:-1:exon
so has part: feature:245575-245867:-1:exon

position:256715:-1
position: 256715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256656-256715:-1:exon

position:256656:-1
position: 256656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:255780-255975:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:254886-254967:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:254448-254484:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252170-252692:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251976-252053:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251367-251417:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:250579-250717:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:247726-247762:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:246974-247085:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:246321-246410:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:245575-245867:-1:exon

TSEN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TSEN2
product: tRNA splicing endonuclease subunit 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030458376.1
SIO_010081: TSEN2
subclass of: SO_0000673
so part of: TSEN2
location: complement(join(245575..245867,246321..246410,246974..247085,247726..247762,250579..250717,251367..251417,251976..252053,252170..252692,254448..254484,254886..254967,255780..255975,256529..256594))
location: region:245575-256594:-1
so has part: feature:256529-256594:-1:exon
so has part: feature:255780-255975:-1:exon
so has part: feature:254886-254967:-1:exon
so has part: feature:254448-254484:-1:exon
so has part: feature:252170-252692:-1:exon
so has part: feature:251976-252053:-1:exon
so has part: feature:251367-251417:-1:exon
so has part: feature:250579-250717:-1:exon
so has part: feature:247726-247762:-1:exon
so has part: feature:246974-247085:-1:exon
so has part: feature:246321-246410:-1:exon
so has part: feature:245575-245867:-1:exon

position:256594:-1
position: 256594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256529-256594:-1:exon

position:256529:-1
position: 256529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:255780-255975:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:254886-254967:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:254448-254484:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252170-252692:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251976-252053:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251367-251417:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:250579-250717:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:247726-247762:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:246974-247085:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:246321-246410:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:245575-245867:-1:exon

TSEN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TSEN2
product: tRNA splicing endonuclease subunit 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030458374.1
SIO_010081: TSEN2
subclass of: SO_0000673
so part of: TSEN2
location: complement(join(245575..245867,246321..246410,246974..247085,247726..247762,250579..250717,251367..251417,251976..252053,252170..252692,254448..254484,254886..254967,255780..255975,256146..256486))
location: region:245575-256486:-1
so has part: feature:256146-256486:-1:exon
so has part: feature:255780-255975:-1:exon
so has part: feature:254886-254967:-1:exon
so has part: feature:254448-254484:-1:exon
so has part: feature:252170-252692:-1:exon
so has part: feature:251976-252053:-1:exon
so has part: feature:251367-251417:-1:exon
so has part: feature:250579-250717:-1:exon
so has part: feature:247726-247762:-1:exon
so has part: feature:246974-247085:-1:exon
so has part: feature:246321-246410:-1:exon
so has part: feature:245575-245867:-1:exon

position:256486:-1
position: 256486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256146-256486:-1:exon

position:256146:-1
position: 256146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:255780-255975:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:254886-254967:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:254448-254484:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252170-252692:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251976-252053:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251367-251417:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:250579-250717:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:247726-247762:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:246974-247085:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:246321-246410:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:245575-245867:-1:exon

TSEN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TSEN2
product: tRNA splicing endonuclease subunit 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030458378.1
SIO_010081: TSEN2
subclass of: SO_0000673
so part of: TSEN2
location: complement(join(245575..245867,246321..246410,246974..247085,247726..247762,250579..250717,251367..251417,251976..252053,252170..252692,254448..254484,254886..254967,255780..255975,256160..256180))
location: region:245575-256180:-1
so has part: feature:256160-256180:-1:exon
so has part: feature:255780-255975:-1:exon
so has part: feature:254886-254967:-1:exon
so has part: feature:254448-254484:-1:exon
so has part: feature:252170-252692:-1:exon
so has part: feature:251976-252053:-1:exon
so has part: feature:251367-251417:-1:exon
so has part: feature:250579-250717:-1:exon
so has part: feature:247726-247762:-1:exon
so has part: feature:246974-247085:-1:exon
so has part: feature:246321-246410:-1:exon
so has part: feature:245575-245867:-1:exon

position:256180:-1
position: 256180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256160-256180:-1:exon

position:256160:-1
position: 256160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:255780-255975:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:254886-254967:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:254448-254484:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252170-252692:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251976-252053:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251367-251417:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:250579-250717:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:247726-247762:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:246974-247085:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:246321-246410:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:245575-245867:-1:exon

TSEN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TSEN2
product: tRNA splicing endonuclease subunit 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030458379.1
SIO_010081: TSEN2
subclass of: SO_0000673
so part of: TSEN2
location: complement(join(245575..245867,246321..246410,246974..247085,247726..247762,250579..250717,251367..251417,251976..252053,252170..252692,254448..254484,254886..254967,255735..255821))
location: region:245575-255821:-1
so has part: feature:255735-255821:-1:exon
so has part: feature:254886-254967:-1:exon
so has part: feature:254448-254484:-1:exon
so has part: feature:252170-252692:-1:exon
so has part: feature:251976-252053:-1:exon
so has part: feature:251367-251417:-1:exon
so has part: feature:250579-250717:-1:exon
so has part: feature:247726-247762:-1:exon
so has part: feature:246974-247085:-1:exon
so has part: feature:246321-246410:-1:exon
so has part: feature:245575-245867:-1:exon

position:255821:-1
position: 255821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255735-255821:-1:exon

position:255735:-1
position: 255735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:254886-254967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:254448-254484:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:252170-252692:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:251976-252053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251367-251417:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:250579-250717:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:247726-247762:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:246974-247085:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:246321-246410:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:245575-245867:-1:exon

TSEN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TSEN2
product: tRNA splicing endonuclease subunit 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030458373.1
SIO_010081: TSEN2
subclass of: SO_0000673
so part of: TSEN2
location: complement(join(245576..245867,246321..246410,246974..247085,247726..247762,250579..250717,251367..251417,251976..252053,252170..252692,254448..254484,254886..254967,255780..255975,256777..256854))
location: region:245576-256854:-1
so has part: feature:256777-256854:-1:exon
so has part: feature:255780-255975:-1:exon
so has part: feature:254886-254967:-1:exon
so has part: feature:254448-254484:-1:exon
so has part: feature:252170-252692:-1:exon
so has part: feature:251976-252053:-1:exon
so has part: feature:251367-251417:-1:exon
so has part: feature:250579-250717:-1:exon
so has part: feature:247726-247762:-1:exon
so has part: feature:246974-247085:-1:exon
so has part: feature:246321-246410:-1:exon
so has part: feature:245576-245867:-1:exon

position:245576:-1
position: 245576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256777-256854:-1:exon

position:256777:-1
position: 256777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:255780-255975:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:254886-254967:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:254448-254484:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252170-252692:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251976-252053:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251367-251417:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:250579-250717:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:247726-247762:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:246974-247085:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:246321-246410:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:245576-245867:-1:exon

TSEN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TSEN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-splicing endonuclease subunit Sen2 isoform X1
translation: MAEAVFHPPRRKRRVFETYVAPFPVDVGGKDFRMCQAEILNNHVLVRNPEDIEQLYNKGYFGKGILSRSRPVYSISNPSLAAKWQGDNMNMPIISSKKYQYHVQWAKSVLQQQGLDDCSVTRILENYTKPLEPPVLEEDRAEQTSNSCNRMAPSTENTEFPRQSATESGNVVAPRPENQNEGSKRASLEGDPESGPVAMCGLKEEEQGEVKEGATGACQNPVHRGSEVEESTEPRSGDMSKSRECTAEYVLVEEEEEGSFCPGDDSAHAQGNLVKKEKLVCRKNPFRIFEYLQLSLEEAFFLVYALGCLSIYYGEEPLTILKLWEFFSEVKPNFKTTYMAYHYFRSKGWVPKVGLKYGTDFLLYRKGPPFYHASYSVLAELVDDNFEGSLRRPLSWKSLAGLNRTTANASKELMLCYLIRPSDMTEEEMSTPECMKRIKVQELIVSRWVSSRERSEQEEF
SIO_010081: TSEN2
subclass of: SO_0000673
so part of: TSEN2
location: complement(join(245808..245867,246321..246410,246974..247085,247726..247762,250579..250717,251367..251417,251976..252053,252170..252692,254448..254484,254886..254967,255780..255953))
location: region:245808-255953:-1
so has part: feature:255780-255953:-1:exon
so has part: feature:254886-254967:-1:exon
so has part: feature:254448-254484:-1:exon
so has part: feature:252170-252692:-1:exon
so has part: feature:251976-252053:-1:exon
so has part: feature:251367-251417:-1:exon
so has part: feature:250579-250717:-1:exon
so has part: feature:247726-247762:-1:exon
so has part: feature:246974-247085:-1:exon
so has part: feature:246321-246410:-1:exon
so has part: feature:245808-245867:-1:exon

XP_030314233.1
type: Protein
SIO_000068: ncbiprotein

position:245808:-1
position: 245808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255953:-1
position: 255953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255780-255953:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:254886-254967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:254448-254484:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:252170-252692:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:251976-252053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251367-251417:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:250579-250717:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:247726-247762:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:246974-247085:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:246321-246410:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:245808-245867:-1:exon

TSEN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TSEN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-splicing endonuclease subunit Sen2 isoform X1
translation: MAEAVFHPPRRKRRVFETYVAPFPVDVGGKDFRMCQAEILNNHVLVRNPEDIEQLYNKGYFGKGILSRSRPVYSISNPSLAAKWQGDNMNMPIISSKKYQYHVQWAKSVLQQQGLDDCSVTRILENYTKPLEPPVLEEDRAEQTSNSCNRMAPSTENTEFPRQSATESGNVVAPRPENQNEGSKRASLEGDPESGPVAMCGLKEEEQGEVKEGATGACQNPVHRGSEVEESTEPRSGDMSKSRECTAEYVLVEEEEEGSFCPGDDSAHAQGNLVKKEKLVCRKNPFRIFEYLQLSLEEAFFLVYALGCLSIYYGEEPLTILKLWEFFSEVKPNFKTTYMAYHYFRSKGWVPKVGLKYGTDFLLYRKGPPFYHASYSVLAELVDDNFEGSLRRPLSWKSLAGLNRTTANASKELMLCYLIRPSDMTEEEMSTPECMKRIKVQELIVSRWVSSRERSEQEEF
SIO_010081: TSEN2
subclass of: SO_0000673
so part of: TSEN2
location: complement(join(245808..245867,246321..246410,246974..247085,247726..247762,250579..250717,251367..251417,251976..252053,252170..252692,254448..254484,254886..254967,255780..255953))
location: region:245808-255953:-1
so has part: feature:255780-255953:-1:exon
so has part: feature:254886-254967:-1:exon
so has part: feature:254448-254484:-1:exon
so has part: feature:252170-252692:-1:exon
so has part: feature:251976-252053:-1:exon
so has part: feature:251367-251417:-1:exon
so has part: feature:250579-250717:-1:exon
so has part: feature:247726-247762:-1:exon
so has part: feature:246974-247085:-1:exon
so has part: feature:246321-246410:-1:exon
so has part: feature:245808-245867:-1:exon

XP_030314234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:255780-255953:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:254886-254967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:254448-254484:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:252170-252692:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:251976-252053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251367-251417:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:250579-250717:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:247726-247762:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:246974-247085:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:246321-246410:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:245808-245867:-1:exon

TSEN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TSEN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-splicing endonuclease subunit Sen2 isoform X1
translation: MAEAVFHPPRRKRRVFETYVAPFPVDVGGKDFRMCQAEILNNHVLVRNPEDIEQLYNKGYFGKGILSRSRPVYSISNPSLAAKWQGDNMNMPIISSKKYQYHVQWAKSVLQQQGLDDCSVTRILENYTKPLEPPVLEEDRAEQTSNSCNRMAPSTENTEFPRQSATESGNVVAPRPENQNEGSKRASLEGDPESGPVAMCGLKEEEQGEVKEGATGACQNPVHRGSEVEESTEPRSGDMSKSRECTAEYVLVEEEEEGSFCPGDDSAHAQGNLVKKEKLVCRKNPFRIFEYLQLSLEEAFFLVYALGCLSIYYGEEPLTILKLWEFFSEVKPNFKTTYMAYHYFRSKGWVPKVGLKYGTDFLLYRKGPPFYHASYSVLAELVDDNFEGSLRRPLSWKSLAGLNRTTANASKELMLCYLIRPSDMTEEEMSTPECMKRIKVQELIVSRWVSSRERSEQEEF
SIO_010081: TSEN2
subclass of: SO_0000673
so part of: TSEN2
location: complement(join(245808..245867,246321..246410,246974..247085,247726..247762,250579..250717,251367..251417,251976..252053,252170..252692,254448..254484,254886..254967,255780..255953))
location: region:245808-255953:-1
so has part: feature:255780-255953:-1:exon
so has part: feature:254886-254967:-1:exon
so has part: feature:254448-254484:-1:exon
so has part: feature:252170-252692:-1:exon
so has part: feature:251976-252053:-1:exon
so has part: feature:251367-251417:-1:exon
so has part: feature:250579-250717:-1:exon
so has part: feature:247726-247762:-1:exon
so has part: feature:246974-247085:-1:exon
so has part: feature:246321-246410:-1:exon
so has part: feature:245808-245867:-1:exon

XP_030314235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:255780-255953:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:254886-254967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:254448-254484:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:252170-252692:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:251976-252053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251367-251417:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:250579-250717:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:247726-247762:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:246974-247085:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:246321-246410:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:245808-245867:-1:exon

TSEN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TSEN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-splicing endonuclease subunit Sen2 isoform X1
translation: MAEAVFHPPRRKRRVFETYVAPFPVDVGGKDFRMCQAEILNNHVLVRNPEDIEQLYNKGYFGKGILSRSRPVYSISNPSLAAKWQGDNMNMPIISSKKYQYHVQWAKSVLQQQGLDDCSVTRILENYTKPLEPPVLEEDRAEQTSNSCNRMAPSTENTEFPRQSATESGNVVAPRPENQNEGSKRASLEGDPESGPVAMCGLKEEEQGEVKEGATGACQNPVHRGSEVEESTEPRSGDMSKSRECTAEYVLVEEEEEGSFCPGDDSAHAQGNLVKKEKLVCRKNPFRIFEYLQLSLEEAFFLVYALGCLSIYYGEEPLTILKLWEFFSEVKPNFKTTYMAYHYFRSKGWVPKVGLKYGTDFLLYRKGPPFYHASYSVLAELVDDNFEGSLRRPLSWKSLAGLNRTTANASKELMLCYLIRPSDMTEEEMSTPECMKRIKVQELIVSRWVSSRERSEQEEF
SIO_010081: TSEN2
subclass of: SO_0000673
so part of: TSEN2
location: complement(join(245808..245867,246321..246410,246974..247085,247726..247762,250579..250717,251367..251417,251976..252053,252170..252692,254448..254484,254886..254967,255780..255953))
location: region:245808-255953:-1
so has part: feature:255780-255953:-1:exon
so has part: feature:254886-254967:-1:exon
so has part: feature:254448-254484:-1:exon
so has part: feature:252170-252692:-1:exon
so has part: feature:251976-252053:-1:exon
so has part: feature:251367-251417:-1:exon
so has part: feature:250579-250717:-1:exon
so has part: feature:247726-247762:-1:exon
so has part: feature:246974-247085:-1:exon
so has part: feature:246321-246410:-1:exon
so has part: feature:245808-245867:-1:exon

XP_030314236.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:255780-255953:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:254886-254967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:254448-254484:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:252170-252692:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:251976-252053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251367-251417:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:250579-250717:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:247726-247762:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:246974-247085:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:246321-246410:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:245808-245867:-1:exon

TSEN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TSEN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-splicing endonuclease subunit Sen2 isoform X1
translation: MAEAVFHPPRRKRRVFETYVAPFPVDVGGKDFRMCQAEILNNHVLVRNPEDIEQLYNKGYFGKGILSRSRPVYSISNPSLAAKWQGDNMNMPIISSKKYQYHVQWAKSVLQQQGLDDCSVTRILENYTKPLEPPVLEEDRAEQTSNSCNRMAPSTENTEFPRQSATESGNVVAPRPENQNEGSKRASLEGDPESGPVAMCGLKEEEQGEVKEGATGACQNPVHRGSEVEESTEPRSGDMSKSRECTAEYVLVEEEEEGSFCPGDDSAHAQGNLVKKEKLVCRKNPFRIFEYLQLSLEEAFFLVYALGCLSIYYGEEPLTILKLWEFFSEVKPNFKTTYMAYHYFRSKGWVPKVGLKYGTDFLLYRKGPPFYHASYSVLAELVDDNFEGSLRRPLSWKSLAGLNRTTANASKELMLCYLIRPSDMTEEEMSTPECMKRIKVQELIVSRWVSSRERSEQEEF
SIO_010081: TSEN2
subclass of: SO_0000673
so part of: TSEN2
location: complement(join(245808..245867,246321..246410,246974..247085,247726..247762,250579..250717,251367..251417,251976..252053,252170..252692,254448..254484,254886..254967,255780..255953))
location: region:245808-255953:-1
so has part: feature:255780-255953:-1:exon
so has part: feature:254886-254967:-1:exon
so has part: feature:254448-254484:-1:exon
so has part: feature:252170-252692:-1:exon
so has part: feature:251976-252053:-1:exon
so has part: feature:251367-251417:-1:exon
so has part: feature:250579-250717:-1:exon
so has part: feature:247726-247762:-1:exon
so has part: feature:246974-247085:-1:exon
so has part: feature:246321-246410:-1:exon
so has part: feature:245808-245867:-1:exon

XP_030314237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:255780-255953:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:254886-254967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:254448-254484:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:252170-252692:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:251976-252053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251367-251417:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:250579-250717:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:247726-247762:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:246974-247085:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:246321-246410:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:245808-245867:-1:exon

TSEN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TSEN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-splicing endonuclease subunit Sen2 isoform X1
translation: MAEAVFHPPRRKRRVFETYVAPFPVDVGGKDFRMCQAEILNNHVLVRNPEDIEQLYNKGYFGKGILSRSRPVYSISNPSLAAKWQGDNMNMPIISSKKYQYHVQWAKSVLQQQGLDDCSVTRILENYTKPLEPPVLEEDRAEQTSNSCNRMAPSTENTEFPRQSATESGNVVAPRPENQNEGSKRASLEGDPESGPVAMCGLKEEEQGEVKEGATGACQNPVHRGSEVEESTEPRSGDMSKSRECTAEYVLVEEEEEGSFCPGDDSAHAQGNLVKKEKLVCRKNPFRIFEYLQLSLEEAFFLVYALGCLSIYYGEEPLTILKLWEFFSEVKPNFKTTYMAYHYFRSKGWVPKVGLKYGTDFLLYRKGPPFYHASYSVLAELVDDNFEGSLRRPLSWKSLAGLNRTTANASKELMLCYLIRPSDMTEEEMSTPECMKRIKVQELIVSRWVSSRERSEQEEF
SIO_010081: TSEN2
subclass of: SO_0000673
so part of: TSEN2
location: complement(join(245808..245867,246321..246410,246974..247085,247726..247762,250579..250717,251367..251417,251976..252053,252170..252692,254448..254484,254886..254967,255780..255953))
location: region:245808-255953:-1
so has part: feature:255780-255953:-1:exon
so has part: feature:254886-254967:-1:exon
so has part: feature:254448-254484:-1:exon
so has part: feature:252170-252692:-1:exon
so has part: feature:251976-252053:-1:exon
so has part: feature:251367-251417:-1:exon
so has part: feature:250579-250717:-1:exon
so has part: feature:247726-247762:-1:exon
so has part: feature:246974-247085:-1:exon
so has part: feature:246321-246410:-1:exon
so has part: feature:245808-245867:-1:exon

XP_030314238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:255780-255953:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:254886-254967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:254448-254484:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:252170-252692:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:251976-252053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251367-251417:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:250579-250717:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:247726-247762:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:246974-247085:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:246321-246410:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:245808-245867:-1:exon

TSEN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TSEN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-splicing endonuclease subunit Sen2 isoform X2
translation: MNMPIISSKKYQYHVQWAKSVLQQQGLDDCSVTRILENYTKPLEPPVLEEDRAEQTSNSCNRMAPSTENTEFPRQSATESGNVVAPRPENQNEGSKRASLEGDPESGPVAMCGLKEEEQGEVKEGATGACQNPVHRGSEVEESTEPRSGDMSKSRECTAEYVLVEEEEEGSFCPGDDSAHAQGNLVKKEKLVCRKNPFRIFEYLQLSLEEAFFLVYALGCLSIYYGEEPLTILKLWEFFSEVKPNFKTTYMAYHYFRSKGWVPKVGLKYGTDFLLYRKGPPFYHASYSVLAELVDDNFEGSLRRPLSWKSLAGLNRTTANASKELMLCYLIRPSDMTEEEMSTPECMKRIKVQELIVSRWVSSRERSEQEEF
SIO_010081: TSEN2
subclass of: SO_0000673
so part of: TSEN2
location: complement(join(245808..245867,246321..246410,246974..247085,247726..247762,250579..250717,251367..251417,251976..252053,252170..252692,254448..254476))
location: region:245808-254476:-1
so has part: feature:254448-254476:-1:exon
so has part: feature:252170-252692:-1:exon
so has part: feature:251976-252053:-1:exon
so has part: feature:251367-251417:-1:exon
so has part: feature:250579-250717:-1:exon
so has part: feature:247726-247762:-1:exon
so has part: feature:246974-247085:-1:exon
so has part: feature:246321-246410:-1:exon
so has part: feature:245808-245867:-1:exon

XP_030314239.1
type: Protein
SIO_000068: ncbiprotein

position:254476:-1
position: 254476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254448-254476:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:252170-252692:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:251976-252053:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251367-251417:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:250579-250717:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:247726-247762:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:246974-247085:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:246321-246410:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:245808-245867:-1:exon

PPARG
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PPARG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(295839..353676)
location: region:295839-353676:-1
so has part: feature:295839-353676:-1:exon
subclass of: SO_0000010

103539737
type: Gene
SIO_000068: ncbigene

position:295839:-1
position: 295839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353676:-1
position: 353676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295839-353676:-1:exon

PPARG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PPARG
product: peroxisome proliferator activated receptor gamma
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 mRNAs, 7 ESTs, 49 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030458331.1
SIO_010081: PPARG
subclass of: SO_0000673
so part of: PPARG
location: complement(join(295839..296441,303467..303917,307623..307822,316648..316786,318478..318647,320293..320520,353567..353676))
location: region:295839-353676:-1
so has part: feature:353567-353676:-1:exon
so has part: feature:320293-320520:-1:exon
so has part: feature:318478-318647:-1:exon
so has part: feature:316648-316786:-1:exon
so has part: feature:307623-307822:-1:exon
so has part: feature:303467-303917:-1:exon
so has part: feature:295839-296441:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:353567-353676:-1:exon

position:353567:-1
position: 353567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:320293-320520:-1:exon

position:320293:-1
position: 320293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320520:-1
position: 320520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:318478-318647:-1:exon

position:318478:-1
position: 318478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318647:-1
position: 318647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:316648-316786:-1:exon

position:316648:-1
position: 316648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316786:-1
position: 316786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:307623-307822:-1:exon

position:307623:-1
position: 307623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307822:-1
position: 307822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:303467-303917:-1:exon

position:303467:-1
position: 303467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303917:-1
position: 303917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:295839-296441:-1:exon

position:296441:-1
position: 296441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPARG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PPARG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxisome proliferator-activated receptor gamma
translation: MVDTEMPFWPLNFGISPVDLSAMEDHTHSFDIKPFTTVDFSSISSPHYEDIPLARTDQTSIDYKYDLKLQDCQSAIKMEPPSPPYFSEKVQLYNKPHEESSNSLMAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIEQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGKTTDKSPFVIYDMNSLMMGEDQIKCKHVSPLQEENKEVAIRIFQRCQFRSVEAVQEITEFAKNIPGFVSLDLNDQVTLLKYGVHEIIYTLLASLMNKDGVLISDGQGFMTREFLKSLRKPFCDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQIIKKTETDMSLHPLLQEIYKDLY
SIO_010081: PPARG
subclass of: SO_0000673
so part of: PPARG
location: complement(join(296194..296441,303467..303917,307623..307822,316648..316786,318478..318647,320293..320512))
location: region:296194-320512:-1
so has part: feature:320293-320512:-1:exon
so has part: feature:318478-318647:-1:exon
so has part: feature:316648-316786:-1:exon
so has part: feature:307623-307822:-1:exon
so has part: feature:303467-303917:-1:exon
so has part: feature:296194-296441:-1:exon

XP_030314191.1
type: Protein
SIO_000068: ncbiprotein

position:296194:-1
position: 296194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320512:-1
position: 320512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320293-320512:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:318478-318647:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:316648-316786:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:307623-307822:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:303467-303917:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:296194-296441:-1:exon

SYN2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SYN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(384176..504656)
location: region:384176-504656:-1
so has part: feature:384176-504656:-1:exon
subclass of: SO_0000010

103525213
type: Gene
SIO_000068: ncbigene

position:384176:-1
position: 384176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504656:-1
position: 504656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384176-504656:-1:exon

SYN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SYN2
product: synapsin II
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 1 long SRA read, 4 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030458618.1
SIO_010081: SYN2
subclass of: SO_0000673
so part of: SYN2
location: complement(join(384176..385093,387588..388113,391839..391899,409235..409384,419259..419361,423220..423294,428099..428241,430537..430599,476753..476842,489863..490019,493582..493673,495993..496050,504646..504656))
location: region:384176-504656:-1
so has part: feature:504646-504656:-1:exon
so has part: feature:495993-496050:-1:exon
so has part: feature:493582-493673:-1:exon
so has part: feature:489863-490019:-1:exon
so has part: feature:476753-476842:-1:exon
so has part: feature:430537-430599:-1:exon
so has part: feature:428099-428241:-1:exon
so has part: feature:423220-423294:-1:exon
so has part: feature:419259-419361:-1:exon
so has part: feature:409235-409384:-1:exon
so has part: feature:391839-391899:-1:exon
so has part: feature:387588-388113:-1:exon
so has part: feature:384176-385093:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:504646-504656:-1:exon

position:504646:-1
position: 504646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:495993-496050:-1:exon

position:495993:-1
position: 495993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:496050:-1
position: 496050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:493582-493673:-1:exon

position:493582:-1
position: 493582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:493673:-1
position: 493673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:489863-490019:-1:exon

position:489863:-1
position: 489863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490019:-1
position: 490019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:476753-476842:-1:exon

position:476753:-1
position: 476753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476842:-1
position: 476842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:430537-430599:-1:exon

position:430537:-1
position: 430537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430599:-1
position: 430599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:428099-428241:-1:exon

position:428099:-1
position: 428099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428241:-1
position: 428241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:423220-423294:-1:exon

position:423220:-1
position: 423220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:423294:-1
position: 423294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:419259-419361:-1:exon

position:419259:-1
position: 419259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:419361:-1
position: 419361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:409235-409384:-1:exon

position:409235:-1
position: 409235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409384:-1
position: 409384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:391839-391899:-1:exon

position:391839:-1
position: 391839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:391899:-1
position: 391899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:387588-388113:-1:exon

position:387588:-1
position: 387588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388113:-1
position: 388113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:384176-385093:-1:exon

position:385093:-1
position: 385093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SYN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SYN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synapsin-2
translation: MANWAKAFRGKKVHGEYDIKVEQAEFSEINLIAHADGNYAVDIQVFRNGTKVVRSFRPDFVLVRQHSFSMAENEDFRNLIIGMQYAGIPSVNSLESIYNFCDKPWVFAQLVSVYKTLGPEKFPLIEQTFYPNHKEMLTMPTFPVVVKIGHAHSGMGKIKVDNHYDFQDIASVVALTQTYATTEPFIDSKYDIRIQKIGSNYKAYMRTSISGNWKTNTGSAMLEQIAMSDKYKLWVDTCSEIFGGLDICAVKAVHGKDGKDYIFEVMDCAMPLIGEHQTEDRQLITDLVVSKMNQMLSKTPIPSPQRPTATQQPQSGSLKEPEPNKIPPQRPPPQGGPVQPQGMQSQSQEPLQPQRMYPPGQAAKPSTSQPQRPPGPTTQQPRPPGPTTQQPRPQAQGPSRLSKEAEPQPAPKPAPKPAPQTAPKPTPQQAPKPAPQPAPKPAPKPAPQSAPKPAPKPAPQQAPKPAPQQVPQPASQPASQPAPQPAPQPTPQPAPQPAPQQKPQSHPQLNKSQSLTNAFSFTESSFFRSSVNEDEAKAETIRNLRKSFASLFSD
SIO_010081: SYN2
subclass of: SO_0000673
so part of: SYN2
location: complement(join(384958..385093,387588..388113,391839..391899,409235..409384,419259..419361,423220..423294,428099..428241,430537..430599,476753..476842,489863..490019,493582..493673,495993..496050,504646..504656))
location: region:384958-504656:-1
so has part: feature:504646-504656:-1:exon
so has part: feature:495993-496050:-1:exon
so has part: feature:493582-493673:-1:exon
so has part: feature:489863-490019:-1:exon
so has part: feature:476753-476842:-1:exon
so has part: feature:430537-430599:-1:exon
so has part: feature:428099-428241:-1:exon
so has part: feature:423220-423294:-1:exon
so has part: feature:419259-419361:-1:exon
so has part: feature:409235-409384:-1:exon
so has part: feature:391839-391899:-1:exon
so has part: feature:387588-388113:-1:exon
so has part: feature:384958-385093:-1:exon

XP_030314478.1
type: Protein
SIO_000068: ncbiprotein

position:384958:-1
position: 384958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504646-504656:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:495993-496050:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:493582-493673:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:489863-490019:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:476753-476842:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:430537-430599:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:428099-428241:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:423220-423294:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:419259-419361:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:409235-409384:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:391839-391899:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:387588-388113:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:384958-385093:-1:exon

TIMP4
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: TIMP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 444333..474187
location: region:444333-474187:1
so has part: feature:444333-474187:1:exon
subclass of: SO_0000010

103539809
type: Gene
SIO_000068: ncbigene

position:444333:1
position: 444333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474187:1
position: 474187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444333-474187:1:exon

TIMP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TIMP4
product: TIMP metallopeptidase inhibitor 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 15 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_008506349.2
SIO_010081: TIMP4
subclass of: SO_0000673
so part of: TIMP4
location: join(444333..444593,464391..464488,469559..469673,470313..470437,470536..474187)
location: region:444333-474187:1
so has part: feature:444333-444593:1:exon
so has part: feature:464391-464488:1:exon
so has part: feature:469559-469673:1:exon
so has part: feature:470313-470437:1:exon
so has part: feature:470536-474187:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:444333-444593:1:exon

position:444593:1
position: 444593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:464391-464488:1:exon

position:464391:1
position: 464391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464488:1
position: 464488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:469559-469673:1:exon

position:469559:1
position: 469559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469673:1
position: 469673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:470313-470437:1:exon

position:470313:1
position: 470313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470437:1
position: 470437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:470536-474187:1:exon

position:470536:1
position: 470536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TIMP4
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9244
gene: TIMP4
product: TIMP metallopeptidase inhibitor 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988054.1
SIO_010081: TIMP4
so part of: TIMP4
location: join(444342..444593,464391..464488,469559..469673,470313..470437,470536..473350,473409..474187)
location: region:444342-474187:1
so has part: feature:444342-444593:1:exon
so has part: feature:464391-464488:1:exon
so has part: feature:469559-469673:1:exon
so has part: feature:470313-470437:1:exon
so has part: feature:470536-473350:1:exon
so has part: feature:473409-474187:1:exon

position:444342:1
position: 444342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444342-444593:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:464391-464488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:469559-469673:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:470313-470437:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:470536-473350:1:exon

position:473350:1
position: 473350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:473409-474187:1:exon

position:473409:1
position: 473409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TIMP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TIMP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metalloproteinase inhibitor 4
translation: MSPGAGRVVLAAVLVLVLSPGDKGLAGACSCAPAHPQQLLCDAAIVIRAKISSEKVVPASDDPLDTHKMIRYEIKQIKMFKGFEKLKDVQYVYTPFDSSLCGVKLDANNKKQYLLTGQILSDGKVLIHLCNYIEPWDDLSLSQKKSLNQRYQMGCGCKITTCYMVPCSITAPNECLWTDWLIERKLYGHQAKHYACIKRSDGTCSWYRGGPPPEKEFIDISEP
SIO_010081: TIMP4
subclass of: SO_0000673
so part of: TIMP4
location: join(444458..444593,464391..464488,469559..469673,470313..470437,470536..470733)
location: region:444458-470733:1
so has part: feature:444458-444593:1:exon
so has part: feature:464391-464488:1:exon
so has part: feature:469559-469673:1:exon
so has part: feature:470313-470437:1:exon
so has part: feature:470536-470733:1:exon

XP_008504571.1
type: Protein
SIO_000068: ncbiprotein

position:444458:1
position: 444458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470733:1
position: 470733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444458-444593:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:464391-464488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:469559-469673:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:470313-470437:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:470536-470733:1:exon

TAMM41
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: TAMM41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 622537..646219
location: region:622537-646219:1
so has part: feature:622537-646219:1:exon
subclass of: SO_0000010

103539726
type: Gene
SIO_000068: ncbigene

position:622537:1
position: 622537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646219:1
position: 646219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622537-646219:1:exon

TAMM41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TAMM41
product: TAM41 mitochondrial translocator assembly and maintenance homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030458398.1
SIO_010081: TAMM41
subclass of: SO_0000673
so part of: TAMM41
location: join(622537..622684,623930..624109,625424..625516,630337..630487,632676..632821,634999..635164,637206..637268,644962..646219)
location: region:622537-646219:1
so has part: feature:622537-622684:1:exon
so has part: feature:623930-624109:1:exon
so has part: feature:625424-625516:1:exon
so has part: feature:630337-630487:1:exon
so has part: feature:632676-632821:1:exon
so has part: feature:634999-635164:1:exon
so has part: feature:637206-637268:1:exon
so has part: feature:644962-646219:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:622537-622684:1:exon

position:622684:1
position: 622684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:623930-624109:1:exon

position:623930:1
position: 623930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:624109:1
position: 624109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:625424-625516:1:exon

position:625424:1
position: 625424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:625516:1
position: 625516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:630337-630487:1:exon

position:630337:1
position: 630337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:630487:1
position: 630487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:632676-632821:1:exon

position:632676:1
position: 632676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632821:1
position: 632821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:634999-635164:1:exon

position:634999:1
position: 634999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635164:1
position: 635164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:637206-637268:1:exon

position:637206:1
position: 637206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:637268:1
position: 637268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:644962-646219:1:exon

position:644962:1
position: 644962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TAMM41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TAMM41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidate cytidylyltransferase, mitochondrial isoform X1
translation: MALPVLSSSGMKFRRVLAHFPQELSLAFAYGSGVFRQAGASAGQGENNMLDFVFAVDDSVTWHMMNLLKNRSHYSFLKVLGPKHISSVQSYGAGIYYNTLVPCNGRMIKYGVISTDTLIDDLLHWKTLYVAGRLQKPVKILTQNENSKLQAALVSNLKCAVTAAFLMLPESFSEEDLYMQIAGLSYSGDFRMIIGEDRSKVQNIVKPNVPHFQKLYSNILQDCPQVVYKHHLGRMEIDKSPEGQFAQLMALPRTLQQKITSLVDPPGKNRDVEEILMQVAHDPDCGFVVHQGISGIVRASSIVQSAKTILTAGAKKSVTYSMKKLYKMTKGWLRKTS
SIO_010081: TAMM41
subclass of: SO_0000673
so part of: TAMM41
location: join(622547..622684,623930..624109,625424..625516,630337..630487,632676..632821,634999..635164,637206..637268,644962..645038)
location: region:622547-645038:1
so has part: feature:622547-622684:1:exon
so has part: feature:623930-624109:1:exon
so has part: feature:625424-625516:1:exon
so has part: feature:630337-630487:1:exon
so has part: feature:632676-632821:1:exon
so has part: feature:634999-635164:1:exon
so has part: feature:637206-637268:1:exon
so has part: feature:644962-645038:1:exon

XP_030314258.1
type: Protein
SIO_000068: ncbiprotein

position:622547:1
position: 622547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645038:1
position: 645038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622547-622684:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623930-624109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:625424-625516:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:630337-630487:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:632676-632821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:634999-635164:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637206-637268:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:644962-645038:1:exon

TAMM41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TAMM41
product: TAM41 mitochondrial translocator assembly and maintenance homolog, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030458402.1
SIO_010081: TAMM41
subclass of: SO_0000673
so part of: TAMM41
location: join(622622..622679,625424..625516,630337..630487,632676..632821,634999..635164,637206..637268,644962..646219)
location: region:622622-646219:1
so has part: feature:622622-622679:1:exon
so has part: feature:625424-625516:1:exon
so has part: feature:630337-630487:1:exon
so has part: feature:632676-632821:1:exon
so has part: feature:634999-635164:1:exon
so has part: feature:637206-637268:1:exon
so has part: feature:644962-646219:1:exon

position:622622:1
position: 622622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622622-622679:1:exon

position:622679:1
position: 622679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:625424-625516:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:630337-630487:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:632676-632821:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:634999-635164:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:637206-637268:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:644962-646219:1:exon

TAMM41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TAMM41
product: TAM41 mitochondrial translocator assembly and maintenance homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030458399.1
SIO_010081: TAMM41
subclass of: SO_0000673
so part of: TAMM41
location: join(622624..622679,623930..624109,625424..625516,630337..630487,632676..632821,634999..635164,637206..637268,644962..646219)
location: region:622624-646219:1
so has part: feature:622624-622679:1:exon
so has part: feature:623930-624109:1:exon
so has part: feature:625424-625516:1:exon
so has part: feature:630337-630487:1:exon
so has part: feature:632676-632821:1:exon
so has part: feature:634999-635164:1:exon
so has part: feature:637206-637268:1:exon
so has part: feature:644962-646219:1:exon

position:622624:1
position: 622624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622624-622679:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623930-624109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:625424-625516:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:630337-630487:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:632676-632821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:634999-635164:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637206-637268:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:644962-646219:1:exon

TAMM41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TAMM41
product: TAM41 mitochondrial translocator assembly and maintenance homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030458400.1
SIO_010081: TAMM41
subclass of: SO_0000673
so part of: TAMM41
location: join(623022..623092,623930..624109,625424..625516,630337..630487,632676..632821,634999..635164,637206..637268,644962..646219)
location: region:623022-646219:1
so has part: feature:623022-623092:1:exon
so has part: feature:623930-624109:1:exon
so has part: feature:625424-625516:1:exon
so has part: feature:630337-630487:1:exon
so has part: feature:632676-632821:1:exon
so has part: feature:634999-635164:1:exon
so has part: feature:637206-637268:1:exon
so has part: feature:644962-646219:1:exon

position:623022:1
position: 623022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623022-623092:1:exon

position:623092:1
position: 623092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:623930-624109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:625424-625516:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:630337-630487:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:632676-632821:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:634999-635164:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637206-637268:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:644962-646219:1:exon

TAMM41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TAMM41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidate cytidylyltransferase, mitochondrial isoform X2
translation: MLDFVFAVDDSVTWHMMNLLKNRSHYSFLKVLGPKHISSVQSYGAGIYYNTLVPCNGRMIKYGVISTDTLIDDLLHWKTLYVAGRLQKPVKILTQNENSKLQAALVSNLKCAVTAAFLMLPESFSEEDLYMQIAGLSYSGDFRMIIGEDRSKVQNIVKPNVPHFQKLYSNILQDCPQVVYKHHLGRMEIDKSPEGQFAQLMALPRTLQQKITSLVDPPGKNRDVEEILMQVAHDPDCGFVVHQGISGIVRASSIVQSAKTILTAGAKKSVTYSMKKLYKMTKGWLRKTS
SIO_010081: TAMM41
subclass of: SO_0000673
so part of: TAMM41
location: join(623936..624109,625424..625516,630337..630487,632676..632821,634999..635164,637206..637268,644962..645038)
location: region:623936-645038:1
so has part: feature:623936-624109:1:exon
so has part: feature:625424-625516:1:exon
so has part: feature:630337-630487:1:exon
so has part: feature:632676-632821:1:exon
so has part: feature:634999-635164:1:exon
so has part: feature:637206-637268:1:exon
so has part: feature:644962-645038:1:exon

XP_030314259.1
type: Protein
SIO_000068: ncbiprotein

position:623936:1
position: 623936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623936-624109:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:625424-625516:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:630337-630487:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:632676-632821:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:634999-635164:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:637206-637268:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:644962-645038:1:exon

TAMM41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TAMM41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidate cytidylyltransferase, mitochondrial isoform X2
translation: MLDFVFAVDDSVTWHMMNLLKNRSHYSFLKVLGPKHISSVQSYGAGIYYNTLVPCNGRMIKYGVISTDTLIDDLLHWKTLYVAGRLQKPVKILTQNENSKLQAALVSNLKCAVTAAFLMLPESFSEEDLYMQIAGLSYSGDFRMIIGEDRSKVQNIVKPNVPHFQKLYSNILQDCPQVVYKHHLGRMEIDKSPEGQFAQLMALPRTLQQKITSLVDPPGKNRDVEEILMQVAHDPDCGFVVHQGISGIVRASSIVQSAKTILTAGAKKSVTYSMKKLYKMTKGWLRKTS
SIO_010081: TAMM41
subclass of: SO_0000673
so part of: TAMM41
location: join(623936..624109,625424..625516,630337..630487,632676..632821,634999..635164,637206..637268,644962..645038)
location: region:623936-645038:1
so has part: feature:623936-624109:1:exon
so has part: feature:625424-625516:1:exon
so has part: feature:630337-630487:1:exon
so has part: feature:632676-632821:1:exon
so has part: feature:634999-635164:1:exon
so has part: feature:637206-637268:1:exon
so has part: feature:644962-645038:1:exon

XP_030314260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:623936-624109:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:625424-625516:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:630337-630487:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:632676-632821:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:634999-635164:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:637206-637268:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:644962-645038:1:exon

TAMM41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TAMM41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidate cytidylyltransferase, mitochondrial isoform X3
translation: MIKYGVISTDTLIDDLLHWKTLYVAGRLQKPVKILTQNENSKLQAALVSNLKCAVTAAFLMLPESFSEEDLYMQIAGLSYSGDFRMIIGEDRSKVQNIVKPNVPHFQKLYSNILQDCPQVVYKHHLGRMEIDKSPEGQFAQLMALPRTLQQKITSLVDPPGKNRDVEEILMQVAHDPDCGFVVHQGISGIVRASSIVQSAKTILTAGAKKSVTYSMKKLYKMTKGWLRKTS
SIO_010081: TAMM41
subclass of: SO_0000673
so part of: TAMM41
location: join(625424..625516,630337..630487,632676..632821,634999..635164,637206..637268,644962..645038)
location: region:625424-645038:1
so has part: feature:625424-625516:1:exon
so has part: feature:630337-630487:1:exon
so has part: feature:632676-632821:1:exon
so has part: feature:634999-635164:1:exon
so has part: feature:637206-637268:1:exon
so has part: feature:644962-645038:1:exon

XP_030314262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:625424-625516:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:630337-630487:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:632676-632821:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:634999-635164:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:637206-637268:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:644962-645038:1:exon

VGLL4
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: VGLL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 659701..749240
location: region:659701-749240:1
so has part: feature:659701-749240:1:exon
subclass of: SO_0000010

103539709
type: Gene
SIO_000068: ncbigene

position:659701:1
position: 659701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:749240:1
position: 749240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:659701-749240:1:exon

VGLL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: VGLL4
product: vestigial like family member 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 16 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030458473.1
SIO_010081: VGLL4
subclass of: SO_0000673
so part of: VGLL4
location: join(659701..659757,666371..666447,723945..724134,741326..741548,744769..744886,746802..749240)
location: region:659701-749240:1
so has part: feature:659701-659757:1:exon
so has part: feature:666371-666447:1:exon
so has part: feature:723945-724134:1:exon
so has part: feature:741326-741548:1:exon
so has part: feature:744769-744886:1:exon
so has part: feature:746802-749240:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:659701-659757:1:exon

position:659757:1
position: 659757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:666371-666447:1:exon

position:666371:1
position: 666371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:666447:1
position: 666447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:723945-724134:1:exon

position:723945:1
position: 723945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:724134:1
position: 724134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:741326-741548:1:exon

position:741326:1
position: 741326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741548:1
position: 741548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:744769-744886:1:exon

position:744769:1
position: 744769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744886:1
position: 744886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:746802-749240:1:exon

position:746802:1
position: 746802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VGLL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: VGLL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 4 isoform X2
translation: METPLDVLSRAASLVHADDEKREAALRGEPRMQSLPVSPALTNHRTGPPPISPNKRKLSMDQGDEELDCENDHVSKMSRMFNPHLNKTANGDYRKEHRERSRSPIERAAAPTMSLHANHLYASIPSLTMEQPLALTKNSMDATRTVGITPTLTSVERQQNRPSVITCASASNRNCNLSHCPIAHSGCGSAVPYRRPASTSAACDPVVEEHFRRSLGKNYKEPEPVANSVSITGTVDDHFAKALGDTWLQIKAAKDGVSSSPESASRRGQSSPSSHMVNHNHSPSVVS
SIO_010081: VGLL4
subclass of: SO_0000673
so part of: VGLL4
location: join(666384..666447,723945..724134,741326..741548,744769..744886,746802..747070)
location: region:666384-747070:1
so has part: feature:666384-666447:1:exon
so has part: feature:723945-724134:1:exon
so has part: feature:741326-741548:1:exon
so has part: feature:744769-744886:1:exon
so has part: feature:746802-747070:1:exon

XP_030314333.1
type: Protein
SIO_000068: ncbiprotein

position:666384:1
position: 666384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:747070:1
position: 747070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:666384-666447:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:723945-724134:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:741326-741548:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:744769-744886:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:746802-747070:1:exon

VGLL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: VGLL4
product: vestigial like family member 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 16 ESTs, 1 long SRA read, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_008506240.2
SIO_010081: VGLL4
subclass of: SO_0000673
so part of: VGLL4
location: join(703125..703657,723945..724134,741326..741548,744769..744886,746802..749240)
location: region:703125-749240:1
so has part: feature:703125-703657:1:exon
so has part: feature:723945-724134:1:exon
so has part: feature:741326-741548:1:exon
so has part: feature:744769-744886:1:exon
so has part: feature:746802-749240:1:exon

position:703125:1
position: 703125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:703125-703657:1:exon

position:703657:1
position: 703657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:723945-724134:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:741326-741548:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:744769-744886:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:746802-749240:1:exon

VGLL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: VGLL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 4 isoform X1
translation: MLFMKMDLLNYQYLDKMNNNIGILCYEGEAALRGEPRMQSLPVSPALTNHRTGPPPISPNKRKLSMDQGDEELDCENDHVSKMSRMFNPHLNKTANGDYRKEHRERSRSPIERAAAPTMSLHANHLYASIPSLTMEQPLALTKNSMDATRTVGITPTLTSVERQQNRPSVITCASASNRNCNLSHCPIAHSGCGSAVPYRRPASTSAACDPVVEEHFRRSLGKNYKEPEPVANSVSITGTVDDHFAKALGDTWLQIKAAKDGVSSSPESASRRGQSSPSSHMVNHNHSPSVVS
SIO_010081: VGLL4
subclass of: SO_0000673
so part of: VGLL4
location: join(703576..703657,723945..724134,741326..741548,744769..744886,746802..747070)
location: region:703576-747070:1
so has part: feature:703576-703657:1:exon
so has part: feature:723945-724134:1:exon
so has part: feature:741326-741548:1:exon
so has part: feature:744769-744886:1:exon
so has part: feature:746802-747070:1:exon

XP_008504462.1
type: Protein
SIO_000068: ncbiprotein

position:703576:1
position: 703576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:703576-703657:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:723945-724134:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:741326-741548:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:744769-744886:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:746802-747070:1:exon

ATG7
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ATG7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(766486..865311)
location: region:766486-865311:-1
so has part: feature:766486-865311:-1:exon
subclass of: SO_0000010

103525208
type: Gene
SIO_000068: ncbigene

position:766486:-1
position: 766486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:865311:-1
position: 865311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:766486-865311:-1:exon

ATG7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ATG7
product: autophagy related 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 ESTs, 1 long SRA read, 6 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030458383.1
SIO_010081: ATG7
subclass of: SO_0000673
so part of: ATG7
location: complement(join(766486..767565,825597..825719,841548..841628,843647..843722,844466..844581,844815..845018,849453..849647,850961..851119,851717..851861,852942..853032,854071..854192,854853..854941,856815..856964,857986..858102,858646..858723,859850..859967,861658..861712,861920..862130,865224..865311))
location: region:766486-865311:-1
so has part: feature:865224-865311:-1:exon
so has part: feature:861920-862130:-1:exon
so has part: feature:861658-861712:-1:exon
so has part: feature:859850-859967:-1:exon
so has part: feature:858646-858723:-1:exon
so has part: feature:857986-858102:-1:exon
so has part: feature:856815-856964:-1:exon
so has part: feature:854853-854941:-1:exon
so has part: feature:854071-854192:-1:exon
so has part: feature:852942-853032:-1:exon
so has part: feature:851717-851861:-1:exon
so has part: feature:850961-851119:-1:exon
so has part: feature:849453-849647:-1:exon
so has part: feature:844815-845018:-1:exon
so has part: feature:844466-844581:-1:exon
so has part: feature:843647-843722:-1:exon
so has part: feature:841548-841628:-1:exon
so has part: feature:825597-825719:-1:exon
so has part: feature:766486-767565:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:865224-865311:-1:exon

position:865224:-1
position: 865224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:861920-862130:-1:exon

position:861920:-1
position: 861920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:862130:-1
position: 862130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:861658-861712:-1:exon

position:861658:-1
position: 861658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:861712:-1
position: 861712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:859850-859967:-1:exon

position:859850:-1
position: 859850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859967:-1
position: 859967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:858646-858723:-1:exon

position:858646:-1
position: 858646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:858723:-1
position: 858723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:857986-858102:-1:exon

position:857986:-1
position: 857986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:858102:-1
position: 858102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:856815-856964:-1:exon

position:856815:-1
position: 856815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:856964:-1
position: 856964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:854853-854941:-1:exon

position:854853:-1
position: 854853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:854941:-1
position: 854941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:854071-854192:-1:exon

position:854071:-1
position: 854071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:854192:-1
position: 854192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:852942-853032:-1:exon

position:852942:-1
position: 852942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:853032:-1
position: 853032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:851717-851861:-1:exon

position:851717:-1
position: 851717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:851861:-1
position: 851861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:850961-851119:-1:exon

position:850961:-1
position: 850961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:851119:-1
position: 851119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:849453-849647:-1:exon

position:849453:-1
position: 849453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:849647:-1
position: 849647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:844815-845018:-1:exon

position:844815:-1
position: 844815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845018:-1
position: 845018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:844466-844581:-1:exon

position:844466:-1
position: 844466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844581:-1
position: 844581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:843647-843722:-1:exon

position:843647:-1
position: 843647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:843722:-1
position: 843722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:841548-841628:-1:exon

position:841548:-1
position: 841548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:841628:-1
position: 841628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:825597-825719:-1:exon

position:825597:-1
position: 825597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:825719:-1
position: 825719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:766486-767565:-1:exon

position:767565:-1
position: 767565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATG7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ATG7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-like modifier-activating enzyme ATG7
translation: MAAASNEVHHLVEPGISKLQFAPFSSALDAGFWHELTQRKLNEYRLDETPKVIKGYYYNGDPLGLPARLTLEFSAFDMNSSIPARCCPAFGTLYNTNTFETFKSCDKKSLLEKEANEIWESIKSGAALENPMLLNRFLLLTFADLKKYHFYYWFCYPALCFPDGIQIIQKPVSLTDRFSLNQIQALQKAYDELCQKEGVTALPYFLIKYHDNSVMVSLLKKWDDFFQDQGGKVTVGVYDPCNLSHYPGWPLRNFLIMAAHKWGSTLQSIEVLCFRDRTMQGVRDIAHSIIFEIKLPQRPLGPDCPKAVGWEKNQKGGMGPRMVNLSECMDPKRLAESSVDLNLKLMCWRLVPTLDLEKIVSAKCLLLGAGTLGCSVARTLMGWGVRKITFVDNAKISYSNPVRQPLYEFEDCLSGGKPKALAAADRLQKIFPGVVSEGYNMSIPMPGHPVNFSEVTMAQAQKDVAKLEELIDAHDVVFLLMDTRESRWLPAVIAASKRKLVINAALGFDTFVVMRHGLKKPKHQESGDSCSSSASASSDLLGSSLFSNIPGYKLGCYFCNDVVAPGDSTRDRTLDQQCTVSRPGLAMVAGALAVELMVSVLQHPEGGYAVASSSDDRMNEPPTSLGLVPHQIRGFLSRFDNVLPVSLAFDKCTACSTKVLDQYEQEGFNFLAKVFNSSHSFLEDLTGLTLLHQETQAAEIWDMSDDETV
SIO_010081: ATG7
subclass of: SO_0000673
so part of: ATG7
location: complement(join(767533..767565,825597..825719,841548..841628,843647..843722,844466..844581,844815..845018,849453..849647,850961..851119,851717..851861,852942..853032,854071..854192,854853..854941,856815..856964,857986..858102,858646..858723,859850..859967,861658..861712,861920..862097))
location: region:767533-862097:-1
so has part: feature:861920-862097:-1:exon
so has part: feature:861658-861712:-1:exon
so has part: feature:859850-859967:-1:exon
so has part: feature:858646-858723:-1:exon
so has part: feature:857986-858102:-1:exon
so has part: feature:856815-856964:-1:exon
so has part: feature:854853-854941:-1:exon
so has part: feature:854071-854192:-1:exon
so has part: feature:852942-853032:-1:exon
so has part: feature:851717-851861:-1:exon
so has part: feature:850961-851119:-1:exon
so has part: feature:849453-849647:-1:exon
so has part: feature:844815-845018:-1:exon
so has part: feature:844466-844581:-1:exon
so has part: feature:843647-843722:-1:exon
so has part: feature:841548-841628:-1:exon
so has part: feature:825597-825719:-1:exon
so has part: feature:767533-767565:-1:exon

XP_030314243.1
type: Protein
SIO_000068: ncbiprotein

position:767533:-1
position: 767533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:862097:-1
position: 862097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:861920-862097:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:861658-861712:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:859850-859967:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:858646-858723:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:857986-858102:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:856815-856964:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:854853-854941:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:854071-854192:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:852942-853032:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:851717-851861:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:850961-851119:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:849453-849647:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:844815-845018:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:844466-844581:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:843647-843722:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:841548-841628:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:825597-825719:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:767533-767565:-1:exon

HRH1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: HRH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(871099..885425)
location: region:871099-885425:-1
so has part: feature:871099-885425:-1:exon
subclass of: SO_0000010

103539700
type: Gene
SIO_000068: ncbigene

position:871099:-1
position: 871099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885425:-1
position: 885425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:871099-885425:-1:exon

HRH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: HRH1
product: histamine receptor H1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_008506230.2
SIO_010081: HRH1
subclass of: SO_0000673
so part of: HRH1
location: complement(join(871099..872612,885257..885425))
location: region:871099-885425:-1
so has part: feature:885257-885425:-1:exon
so has part: feature:871099-872612:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:885257-885425:-1:exon

position:885257:-1
position: 885257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:871099-872612:-1:exon

position:872612:-1
position: 872612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HRH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: HRH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histamine H1 receptor
translation: MSGNTTESSTTPHPALGVLLGSISLTTIVMNILVLYAVKTEKKLQTVGNLYIVSLSVADLIVGAAVMPLNVVYLLNQKWTLGLPACSFWLSMDYVASTASIFNLFILCVDRYRSVQQPLKYLKYRTKMRALLMILGAWLLSFMWVIPILGWHVFANNGNRTVDSNTCETEFYGVTWFKVLTAIVNFYLPSLMMLWLYYKIFRAVRKHCQHRDLMDGSHHSFSGKNSIHHPKTKDEEKICLQKQILDENAPPKEKQGSPQLKNREAELHFSNPDKSSNCKSNRKVSLCFPLTTAQSEPGLDKAGQKCVCVPKENKNEEEPCSQDSDVSDASDNHTFTEEVSSRVLPNPNPARACSPQGKTGKRDFRGLGCLRKTWQSLHSHSKRQTQGLHRSRERKAAKQLGVIMAAFMFCWIPYFVLFMVIAFHGHKQYLSWRMFTIWLGYVNSTLNPFLYPLCNQNFKKTFKKILHIP
SIO_010081: HRH1
subclass of: SO_0000673
so part of: HRH1
location: complement(871099..872508)
location: region:871099-872508:-1
so has part: feature:871099-872508:-1:exon

XP_008504452.1
type: Protein
SIO_000068: ncbiprotein

position:872508:-1
position: 872508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:871099-872508:-1:exon

SLC6A1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SLC6A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(967482..984977)
location: region:967482-984977:-1
so has part: feature:967482-984977:-1:exon
subclass of: SO_0000010

103539690
type: Gene
SIO_000068: ncbigene

position:967482:-1
position: 967482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:984977:-1
position: 984977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:967482-984977:-1:exon

SLC6A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SLC6A1
product: solute carrier family 6 member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 11 ESTs, 65 Proteins, and 59% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008506219.2
SIO_010081: SLC6A1
subclass of: SO_0000673
so part of: SLC6A1
location: complement(join(967482..967697,970011..970178,972101..972201,973517..973619,974100..974231,976109..976221,978423..978547,978857..978960,979077..979211,980504..980636,980747..980856,982413..982513,983735..983866,984668..984977))
location: region:967482-984977:-1
so has part: feature:984668-984977:-1:exon
so has part: feature:983735-983866:-1:exon
so has part: feature:982413-982513:-1:exon
so has part: feature:980747-980856:-1:exon
so has part: feature:980504-980636:-1:exon
so has part: feature:979077-979211:-1:exon
so has part: feature:978857-978960:-1:exon
so has part: feature:978423-978547:-1:exon
so has part: feature:976109-976221:-1:exon
so has part: feature:974100-974231:-1:exon
so has part: feature:973517-973619:-1:exon
so has part: feature:972101-972201:-1:exon
so has part: feature:970011-970178:-1:exon
so has part: feature:967482-967697:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:984668-984977:-1:exon

position:984668:-1
position: 984668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:983735-983866:-1:exon

position:983735:-1
position: 983735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:983866:-1
position: 983866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:982413-982513:-1:exon

position:982413:-1
position: 982413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:982513:-1
position: 982513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:980747-980856:-1:exon

position:980747:-1
position: 980747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:980856:-1
position: 980856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:980504-980636:-1:exon

position:980504:-1
position: 980504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:980636:-1
position: 980636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:979077-979211:-1:exon

position:979077:-1
position: 979077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:979211:-1
position: 979211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:978857-978960:-1:exon

position:978857:-1
position: 978857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:978960:-1
position: 978960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:978423-978547:-1:exon

position:978423:-1
position: 978423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:978547:-1
position: 978547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:976109-976221:-1:exon

position:976109:-1
position: 976109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976221:-1
position: 976221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:974100-974231:-1:exon

position:974100:-1
position: 974100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974231:-1
position: 974231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:973517-973619:-1:exon

position:973517:-1
position: 973517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973619:-1
position: 973619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:972101-972201:-1:exon

position:972101:-1
position: 972101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972201:-1
position: 972201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:970011-970178:-1:exon

position:970011:-1
position: 970011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:970178:-1
position: 970178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:967482-967697:-1:exon

position:967697:-1
position: 967697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC6A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SLC6A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium- and chloride-dependent GABA transporter 1
translation: MATNGTKVADGQISTEVDASITNDKPKTLVVKVQKKKTDLPDRDTWKGKFDFLMSCVGYAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLECSLGQYTSIGGLGVWKLAPMFKGVGLAAAVLSFWLNIYYIVIISWAIYYLYNSFTTTLPWKHCENPWNTDRCFSNYSLANTTNMTSAVVEFWERNMHQMTDGLEKPGQIRWPLAITLAIAWILVYFCIWKGVGWTGKVVYFSATYPYVMLLILFFRGVTLPGAKEGILFYITPNFSKLSDSEVWLDAATQIFFSYGLGLGSLIALGSYNPFNNNVYRDSIIVCCINSCTSMFAGFVIFSIVGFMANVTKRPIADVAASGPGLAFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEFPKLLRNRRELFIAVVCIVSYVIGLSNITQGGIYVFKLFDYYSASGMSLLFLVFFECISISWCYGVNRFYDNIQEMVGYRPCIWWKLCWSFFTPIIVAGVFLFSAVQMTPLTMGSYVFPKWGQGVGWFMALSSMVLIPGYMAYMFLTLKGSLKQRIQVMIQPSEDITHPENGPDQAQQSNSANKEAYI
SIO_010081: SLC6A1
subclass of: SO_0000673
so part of: SLC6A1
location: complement(join(967593..967697,970011..970178,972101..972201,973517..973619,974100..974231,976109..976221,978423..978547,978857..978960,979077..979211,980504..980636,980747..980856,982413..982513,983735..983866,984668..984902))
location: region:967593-984902:-1
so has part: feature:984668-984902:-1:exon
so has part: feature:983735-983866:-1:exon
so has part: feature:982413-982513:-1:exon
so has part: feature:980747-980856:-1:exon
so has part: feature:980504-980636:-1:exon
so has part: feature:979077-979211:-1:exon
so has part: feature:978857-978960:-1:exon
so has part: feature:978423-978547:-1:exon
so has part: feature:976109-976221:-1:exon
so has part: feature:974100-974231:-1:exon
so has part: feature:973517-973619:-1:exon
so has part: feature:972101-972201:-1:exon
so has part: feature:970011-970178:-1:exon
so has part: feature:967593-967697:-1:exon

XP_008504441.1
type: Protein
SIO_000068: ncbiprotein

position:967593:-1
position: 967593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:984902:-1
position: 984902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:984668-984902:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:983735-983866:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:982413-982513:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:980747-980856:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:980504-980636:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:979077-979211:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:978857-978960:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:978423-978547:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:976109-976221:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:974100-974231:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:973517-973619:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:972101-972201:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:970011-970178:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:967593-967697:-1:exon

SLC6A11
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SLC6A11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1116275..1205889)
location: region:1116275-1205889:-1
so has part: feature:1116275-1205889:-1:exon
subclass of: SO_0000010

103539678
type: Gene
SIO_000068: ncbigene

position:1116275:-1
position: 1116275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205889:-1
position: 1205889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1116275-1205889:-1:exon

SLC6A11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SLC6A11
product: solute carrier family 6 member 11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008506208.2
SIO_010081: SLC6A11
subclass of: SO_0000673
so part of: SLC6A11
location: complement(join(1116275..1116427,1118189..1118359,1119699..1119799,1120314..1120416,1122675..1122812,1124489..1124601,1126416..1126540,1131970..1132073,1162776..1162910,1181366..1181498,1200079..1200169,1201562..1201702,1201875..1202009,1205670..1205889))
location: region:1116275-1205889:-1
so has part: feature:1205670-1205889:-1:exon
so has part: feature:1201875-1202009:-1:exon
so has part: feature:1201562-1201702:-1:exon
so has part: feature:1200079-1200169:-1:exon
so has part: feature:1181366-1181498:-1:exon
so has part: feature:1162776-1162910:-1:exon
so has part: feature:1131970-1132073:-1:exon
so has part: feature:1126416-1126540:-1:exon
so has part: feature:1124489-1124601:-1:exon
so has part: feature:1122675-1122812:-1:exon
so has part: feature:1120314-1120416:-1:exon
so has part: feature:1119699-1119799:-1:exon
so has part: feature:1118189-1118359:-1:exon
so has part: feature:1116275-1116427:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1205670-1205889:-1:exon

position:1205670:-1
position: 1205670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1201875-1202009:-1:exon

position:1201875:-1
position: 1201875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202009:-1
position: 1202009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1201562-1201702:-1:exon

position:1201562:-1
position: 1201562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1201702:-1
position: 1201702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1200079-1200169:-1:exon

position:1200079:-1
position: 1200079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1200169:-1
position: 1200169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1181366-1181498:-1:exon

position:1181366:-1
position: 1181366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1181498:-1
position: 1181498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1162776-1162910:-1:exon

position:1162776:-1
position: 1162776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1162910:-1
position: 1162910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1131970-1132073:-1:exon

position:1131970:-1
position: 1131970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1132073:-1
position: 1132073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1126416-1126540:-1:exon

position:1126416:-1
position: 1126416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1126540:-1
position: 1126540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1124489-1124601:-1:exon

position:1124489:-1
position: 1124489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1124601:-1
position: 1124601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1122675-1122812:-1:exon

position:1122675:-1
position: 1122675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1122812:-1
position: 1122812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1120314-1120416:-1:exon

position:1120314:-1
position: 1120314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1120416:-1
position: 1120416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1119699-1119799:-1:exon

position:1119699:-1
position: 1119699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1119799:-1
position: 1119799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1118189-1118359:-1:exon

position:1118189:-1
position: 1118189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1118359:-1
position: 1118359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1116275-1116427:-1:exon

position:1116427:-1
position: 1116427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC6A11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SLC6A11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium- and chloride-dependent GABA transporter 3
translation: MTAEKTIPIINGKPEDALDPEASRTNLVHSNDKKVHERGHWNNKVEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFLIPYVVFFICCGIPVFFLETALGQFTSEGGITCWRKVCPLFEGIGYATQVIEAHLNVYYIIILAWAIFYLFNCFTTELPWATCGHEWNTENCVEFQKLNMSNCSQVFLQNATSPVMEFWERRVLAISDGIEHIGNLRWELALCLLAAWTICYFCIWKGTKSTGKVVYVTATFPYIMLMILLIRGVTLPGASEGIKFYLYPDLSRLSDPQVWVDAGTQIFFSYAICLGCLTALGSYNNYNNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMAYEQGVPIAEVAESGPGLAFIAYPKAVTMMPLSPLWAALFFMMLIFLGLDSQFVCVESIVTAVVDMYPKIFRRGYRRELLILGLSIVSYFLGLIMLTEGGMYVFQLFDSYAASGMCLLFVAIFECVCIGWVYGSNRFYENIEDMIGYKPLSLIKWCWMVLTPGICAGIFIFFLVKYKPLKYNNVYIYPDWGYGIGWMMALSSMICIPLWICIKLWKTEGTFIEKFRKLITPSSDLKMRGKLGGGAYIAALNDCDAKLKGDGTIATITEKETHF
SIO_010081: SLC6A11
subclass of: SO_0000673
so part of: SLC6A11
location: complement(join(1116275..1116427,1118189..1118359,1119699..1119799,1120314..1120416,1122675..1122812,1124489..1124601,1126416..1126540,1131970..1132073,1162776..1162910,1181366..1181498,1200079..1200169,1201562..1201702,1201875..1202009,1205670..1205889))
location: region:1116275-1205889:-1
so has part: feature:1205670-1205889:-1:exon
so has part: feature:1201875-1202009:-1:exon
so has part: feature:1201562-1201702:-1:exon
so has part: feature:1200079-1200169:-1:exon
so has part: feature:1181366-1181498:-1:exon
so has part: feature:1162776-1162910:-1:exon
so has part: feature:1131970-1132073:-1:exon
so has part: feature:1126416-1126540:-1:exon
so has part: feature:1124489-1124601:-1:exon
so has part: feature:1122675-1122812:-1:exon
so has part: feature:1120314-1120416:-1:exon
so has part: feature:1119699-1119799:-1:exon
so has part: feature:1118189-1118359:-1:exon
so has part: feature:1116275-1116427:-1:exon

XP_008504430.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1205670-1205889:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1201875-1202009:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1201562-1201702:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1200079-1200169:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1181366-1181498:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1162776-1162910:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1131970-1132073:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1126416-1126540:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1124489-1124601:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1122675-1122812:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1120314-1120416:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1119699-1119799:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1118189-1118359:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1116275-1116427:-1:exon

ATP2B2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ATP2B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1261571..1429974)
location: region:1261571-1429974:-1
so has part: feature:1261571-1429974:-1:exon
subclass of: SO_0000010

103539669
type: Gene
SIO_000068: ncbigene

position:1261571:-1
position: 1261571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1429974:-1
position: 1429974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1261571-1429974:-1:exon

ATP2B2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ATP2B2
product: ATPase plasma membrane Ca2+ transporting 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 8 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008506197.2
SIO_010081: ATP2B2
subclass of: SO_0000673
so part of: ATP2B2
location: complement(join(1261571..1261882,1278117..1278299,1281967..1282074,1284209..1284420,1287465..1287678,1295583..1295774,1296475..1296581,1303526..1303613,1304638..1304817,1309466..1309699,1310596..1310836,1330841..1331083,1332489..1332703,1334903..1335067,1336753..1336794,1342781..1342840,1344325..1344357,1346061..1346186,1352574..1352699,1354033..1354290,1376490..1376687,1429776..1429974))
location: region:1261571-1429974:-1
so has part: feature:1429776-1429974:-1:exon
so has part: feature:1376490-1376687:-1:exon
so has part: feature:1354033-1354290:-1:exon
so has part: feature:1352574-1352699:-1:exon
so has part: feature:1346061-1346186:-1:exon
so has part: feature:1344325-1344357:-1:exon
so has part: feature:1342781-1342840:-1:exon
so has part: feature:1336753-1336794:-1:exon
so has part: feature:1334903-1335067:-1:exon
so has part: feature:1332489-1332703:-1:exon
so has part: feature:1330841-1331083:-1:exon
so has part: feature:1310596-1310836:-1:exon
so has part: feature:1309466-1309699:-1:exon
so has part: feature:1304638-1304817:-1:exon
so has part: feature:1303526-1303613:-1:exon
so has part: feature:1296475-1296581:-1:exon
so has part: feature:1295583-1295774:-1:exon
so has part: feature:1287465-1287678:-1:exon
so has part: feature:1284209-1284420:-1:exon
so has part: feature:1281967-1282074:-1:exon
so has part: feature:1278117-1278299:-1:exon
so has part: feature:1261571-1261882:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1429776-1429974:-1:exon

position:1429776:-1
position: 1429776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1376490-1376687:-1:exon

position:1376490:-1
position: 1376490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1376687:-1
position: 1376687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1354033-1354290:-1:exon

position:1354033:-1
position: 1354033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1354290:-1
position: 1354290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1352574-1352699:-1:exon

position:1352574:-1
position: 1352574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1352699:-1
position: 1352699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1346061-1346186:-1:exon

position:1346061:-1
position: 1346061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1346186:-1
position: 1346186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1344325-1344357:-1:exon

position:1344325:-1
position: 1344325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1344357:-1
position: 1344357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1342781-1342840:-1:exon

position:1342781:-1
position: 1342781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1342840:-1
position: 1342840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1336753-1336794:-1:exon

position:1336753:-1
position: 1336753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1336794:-1
position: 1336794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1334903-1335067:-1:exon

position:1334903:-1
position: 1334903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1335067:-1
position: 1335067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1332489-1332703:-1:exon

position:1332489:-1
position: 1332489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1332703:-1
position: 1332703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1330841-1331083:-1:exon

position:1330841:-1
position: 1330841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1331083:-1
position: 1331083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1310596-1310836:-1:exon

position:1310596:-1
position: 1310596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1310836:-1
position: 1310836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1309466-1309699:-1:exon

position:1309466:-1
position: 1309466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1309699:-1
position: 1309699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1304638-1304817:-1:exon

position:1304638:-1
position: 1304638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1304817:-1
position: 1304817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1303526-1303613:-1:exon

position:1303526:-1
position: 1303526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1303613:-1
position: 1303613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1296475-1296581:-1:exon

position:1296475:-1
position: 1296475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1296581:-1
position: 1296581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1295583-1295774:-1:exon

position:1295583:-1
position: 1295583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1295774:-1
position: 1295774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1287465-1287678:-1:exon

position:1287465:-1
position: 1287465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1287678:-1
position: 1287678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1284209-1284420:-1:exon

position:1284209:-1
position: 1284209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1284420:-1
position: 1284420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1281967-1282074:-1:exon

position:1281967:-1
position: 1281967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1282074:-1
position: 1282074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1278117-1278299:-1:exon

position:1278117:-1
position: 1278117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1278299:-1
position: 1278299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1261571-1261882:-1:exon

position:1261882:-1
position: 1261882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP2B2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ATP2B2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: plasma membrane calcium-transporting ATPase 2
translation: MGDMTNSDFYSKNQRNEANHAGEFGCTLQELRSLMELRGTEAVVKIKETYGETEGLCRHLKTSPTEGLAGTAADLEKRKLIFGKNFIPPKKPKTFIQLVWEALQDVTLIILEIAAIISLGLSFYQPPGEGNEGCGTAAGGAEDEGEAEAGWIEGAAILLSVICVVLVTAFNDWSKEKQFRGLQSRIEQEQKFTVVRGGQVIQIPVAEIVVGDIAQVKYGDLLPADGIFIQGNDLKIDESSLTGESDQVRKSVDKDPMLLSGTHVMEGSGRMLVTAVGVNSQTGIIFTLLGAGGEEEEKKDKKGVKQEDGHQLPATDGAAGANATDNANASLVNGKMQDGNMENSQNKAKQQDGAAAMEMQPLKSAEGGEGDDKDKKKSNMHKKEKSVLQGKLTKLAVQIGKAGLVMSAITVIILVLYFAIDTFVVNKKQWLPECTPVYVQYFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMRDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQAYVGDVHYKEIPDPDSVPAKTLELLVNAIAINSAYTTKILPPEKEGGLPRQVGNKTECGXLGFVLDLKQDYEPVRSLIPEEKLYKVYTFNSVRKSMSTVIKMPVGVSGMYSKGASEIVLKKCSRILNAAGEPRVFRPRDRDEMVKKVIEPMACDGLRTICVAFXDFSSSPEPDWDNENDILSDLTCICVVGIEDPVRPEVPEAIRKCQRAGITVRMVTGDNINTARAIAIKCGIIHPGEDFLCLEGKEFNRRIRNEKGEIEQERIDKIWPKLRVLARSSPTDKHTLVKGIIDSTQVEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNIVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTEALLLRKPYGRNKPLISRTMMKNILGHAVYQLTLIFTLLFVGEKMFKIDSGRNAPLHSPPSEHYTIIFNTFVMMQLFNEINARKIHGERNVFDGIFRNPIFCTIVLGTFAIQIVIVQFGGKPFSCSPLQLDQWMWCVFIGLGELVWGQVIATIPTSRLKFLKEAGRLTEKEEAPEEELNEDVEEIDHAERELRRGQILWFRGLNRIQTQIRVVKAFRSSLYEGLEKPESRTSIHNFMTHPEFRIEDSQPHIPLIDDTDLEEDPALKKNSSPPSSLNKNNSAIDSGINLTTDTSKSATSSSPGSPIHSLETSL
SIO_010081: ATP2B2
subclass of: SO_0000673
so part of: ATP2B2
location: complement(join(1261571..1261882,1278117..1278299,1281967..1282074,1284209..1284420,1287465..1287678,1295583..1295774,1296475..1296581,1303526..1303613,1304638..1304817,1309466..1309699,1310596..1310836,1330841..1331083,1332489..1332703,1334903..1335067,1336753..1336794,1342781..1342840,1344325..1344357,1346061..1346186,1352574..1352699,1354033..1354290,1376490..1376687,1429776..1429974))
location: region:1261571-1429974:-1
so has part: feature:1429776-1429974:-1:exon
so has part: feature:1376490-1376687:-1:exon
so has part: feature:1354033-1354290:-1:exon
so has part: feature:1352574-1352699:-1:exon
so has part: feature:1346061-1346186:-1:exon
so has part: feature:1344325-1344357:-1:exon
so has part: feature:1342781-1342840:-1:exon
so has part: feature:1336753-1336794:-1:exon
so has part: feature:1334903-1335067:-1:exon
so has part: feature:1332489-1332703:-1:exon
so has part: feature:1330841-1331083:-1:exon
so has part: feature:1310596-1310836:-1:exon
so has part: feature:1309466-1309699:-1:exon
so has part: feature:1304638-1304817:-1:exon
so has part: feature:1303526-1303613:-1:exon
so has part: feature:1296475-1296581:-1:exon
so has part: feature:1295583-1295774:-1:exon
so has part: feature:1287465-1287678:-1:exon
so has part: feature:1284209-1284420:-1:exon
so has part: feature:1281967-1282074:-1:exon
so has part: feature:1278117-1278299:-1:exon
so has part: feature:1261571-1261882:-1:exon

XP_008504419.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1429776-1429974:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1376490-1376687:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1354033-1354290:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1352574-1352699:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1346061-1346186:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1344325-1344357:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1342781-1342840:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1336753-1336794:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1334903-1335067:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1332489-1332703:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1330841-1331083:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1310596-1310836:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1309466-1309699:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1304638-1304817:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1303526-1303613:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1296475-1296581:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1295583-1295774:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1287465-1287678:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1284209-1284420:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1281967-1282074:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1278117-1278299:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1261571-1261882:-1:exon

IARS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: IARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1679078..1779305)
location: region:1679078-1779305:-1
so has part: feature:1679078-1779305:-1:exon
subclass of: SO_0000010

103525199
type: Gene
SIO_000068: ncbigene

position:1679078:-1
position: 1679078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1779305:-1
position: 1779305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1679078-1779305:-1:exon

IARS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: IARS1
product: isoleucyl-tRNA synthetase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 16 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030458255.1
SIO_010081: IARS1
subclass of: SO_0000673
so part of: IARS1
location: complement(join(1679078..1679697,1684254..1684406,1685370..1685513,1690210..1690335,1691306..1691417,1694918..1695094,1697252..1697347,1697627..1697739,1698133..1698307,1705074..1705157,1705371..1705473,1708276..1708397,1708831..1708908,1709273..1709364,1713745..1713865,1716721..1716868,1718936..1719019,1719682..1719768,1721795..1721989,1722335..1722408,1727219..1727345,1738015..1738113,1742440..1742531,1743881..1744003,1748675..1748770,1750273..1750333,1754270..1754357,1755168..1755315,1758040..1758157,1766766..1766848,1769714..1769833,1770311..1770467,1770975..1771094,1773676..1773763,1776740..1776819,1777893..1777979,1778387..1778592,1778821..1779305))
location: region:1679078-1779305:-1
so has part: feature:1778821-1779305:-1:exon
so has part: feature:1778387-1778592:-1:exon
so has part: feature:1777893-1777979:-1:exon
so has part: feature:1776740-1776819:-1:exon
so has part: feature:1773676-1773763:-1:exon
so has part: feature:1770975-1771094:-1:exon
so has part: feature:1770311-1770467:-1:exon
so has part: feature:1769714-1769833:-1:exon
so has part: feature:1766766-1766848:-1:exon
so has part: feature:1758040-1758157:-1:exon
so has part: feature:1755168-1755315:-1:exon
so has part: feature:1754270-1754357:-1:exon
so has part: feature:1750273-1750333:-1:exon
so has part: feature:1748675-1748770:-1:exon
so has part: feature:1743881-1744003:-1:exon
so has part: feature:1742440-1742531:-1:exon
so has part: feature:1738015-1738113:-1:exon
so has part: feature:1727219-1727345:-1:exon
so has part: feature:1722335-1722408:-1:exon
so has part: feature:1721795-1721989:-1:exon
so has part: feature:1719682-1719768:-1:exon
so has part: feature:1718936-1719019:-1:exon
so has part: feature:1716721-1716868:-1:exon
so has part: feature:1713745-1713865:-1:exon
so has part: feature:1709273-1709364:-1:exon
so has part: feature:1708831-1708908:-1:exon
so has part: feature:1708276-1708397:-1:exon
so has part: feature:1705371-1705473:-1:exon
so has part: feature:1705074-1705157:-1:exon
so has part: feature:1698133-1698307:-1:exon
so has part: feature:1697627-1697739:-1:exon
so has part: feature:1697252-1697347:-1:exon
so has part: feature:1694918-1695094:-1:exon
so has part: feature:1691306-1691417:-1:exon
so has part: feature:1690210-1690335:-1:exon
so has part: feature:1685370-1685513:-1:exon
so has part: feature:1684254-1684406:-1:exon
so has part: feature:1679078-1679697:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1778821-1779305:-1:exon

position:1778821:-1
position: 1778821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1778387-1778592:-1:exon

position:1778387:-1
position: 1778387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1778592:-1
position: 1778592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1777893-1777979:-1:exon

position:1777893:-1
position: 1777893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1777979:-1
position: 1777979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1776740-1776819:-1:exon

position:1776740:-1
position: 1776740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1776819:-1
position: 1776819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1773676-1773763:-1:exon

position:1773676:-1
position: 1773676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1773763:-1
position: 1773763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1770975-1771094:-1:exon

position:1770975:-1
position: 1770975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1771094:-1
position: 1771094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1770311-1770467:-1:exon

position:1770311:-1
position: 1770311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1770467:-1
position: 1770467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1769714-1769833:-1:exon

position:1769714:-1
position: 1769714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1769833:-1
position: 1769833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1766766-1766848:-1:exon

position:1766766:-1
position: 1766766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1766848:-1
position: 1766848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1758040-1758157:-1:exon

position:1758040:-1
position: 1758040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1758157:-1
position: 1758157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1755168-1755315:-1:exon

position:1755168:-1
position: 1755168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1755315:-1
position: 1755315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1754270-1754357:-1:exon

position:1754270:-1
position: 1754270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1754357:-1
position: 1754357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1750273-1750333:-1:exon

position:1750273:-1
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urn:…
SIO_000300: 14
SIO_000628: feature:1748675-1748770:-1:exon

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SIO_000300: 15
SIO_000628: feature:1743881-1744003:-1:exon

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urn:…
SIO_000300: 16
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urn:…
SIO_000300: 17
SIO_000628: feature:1738015-1738113:-1:exon

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urn:…
SIO_000300: 18
SIO_000628: feature:1727219-1727345:-1:exon

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urn:…
SIO_000300: 19
SIO_000628: feature:1722335-1722408:-1:exon

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SIO_000300: 20
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SIO_000300: 21
SIO_000628: feature:1719682-1719768:-1:exon

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urn:…
SIO_000300: 22
SIO_000628: feature:1718936-1719019:-1:exon

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SIO_000300: 23
SIO_000628: feature:1716721-1716868:-1:exon

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SIO_000300: 24
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SIO_000300: 25
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SIO_000300: 26
SIO_000628: feature:1708831-1708908:-1:exon

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SIO_000300: 27
SIO_000628: feature:1708276-1708397:-1:exon

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SIO_000300: 28
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SIO_000300: 29
SIO_000628: feature:1705074-1705157:-1:exon

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SIO_000300: 30
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SIO_000300: 31
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SIO_000300: 32
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SIO_000300: 33
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SIO_000300: 34
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SIO_000300: 35
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SIO_000300: 36
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SIO_000300: 37
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SIO_000300: 38
SIO_000628: feature:1679078-1679697:-1:exon

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IARS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: IARS1
product: isoleucyl-tRNA synthetase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 16 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030458256.1
SIO_010081: IARS1
subclass of: SO_0000673
so part of: IARS1
location: complement(join(1679078..1679697,1684254..1684406,1685370..1685513,1690210..1690335,1691306..1691417,1694918..1695094,1697252..1697347,1697627..1697739,1698133..1698307,1705074..1705157,1705371..1705473,1708276..1708397,1708831..1708908,1709273..1709364,1713745..1713865,1716721..1716868,1718936..1719019,1719682..1719768,1721795..1721989,1722335..1722408,1727219..1727345,1738015..1738113,1742440..1742531,1743881..1744003,1748675..1748770,1750273..1750333,1754270..1754357,1755168..1755315,1758040..1758157,1766766..1766848,1769714..1769833,1770311..1770467,1770975..1771094,1773676..1773763,1776740..1776819,1777893..1777979,1778792..1779305))
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urn:…
SIO_000300: 1
SIO_000628: feature:1778792-1779305:-1:exon

position:1778792:-1
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reference: sequence
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urn:…
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SIO_000628: feature:1742440-1742531:-1:exon

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SIO_000300: 19
SIO_000628: feature:1721795-1721989:-1:exon

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SIO_000300: 20
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SIO_000628: feature:1718936-1719019:-1:exon

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SIO_000628: feature:1716721-1716868:-1:exon

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SIO_000628: feature:1698133-1698307:-1:exon

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SIO_000628: feature:1697627-1697739:-1:exon

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SIO_000300: 32
SIO_000628: feature:1694918-1695094:-1:exon

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SIO_000628: feature:1691306-1691417:-1:exon

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SIO_000300: 34
SIO_000628: feature:1690210-1690335:-1:exon

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SIO_000300: 35
SIO_000628: feature:1685370-1685513:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1684254-1684406:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1679078-1679697:-1:exon

IARS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: IARS1
product: isoleucyl-tRNA synthetase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 16 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030458254.1
SIO_010081: IARS1
subclass of: SO_0000673
so part of: IARS1
location: complement(join(1679078..1679697,1684254..1684406,1685370..1685513,1690210..1690335,1691306..1691417,1694918..1695094,1697252..1697347,1697627..1697739,1698133..1698307,1705074..1705157,1705371..1705473,1708276..1708397,1708831..1708908,1709273..1709364,1713745..1713865,1716721..1716868,1718936..1719019,1719682..1719768,1721795..1721989,1722335..1722408,1727219..1727345,1738015..1738113,1742440..1742531,1743881..1744003,1748675..1748770,1750273..1750333,1754270..1754357,1755168..1755315,1758040..1758157,1766766..1766848,1769714..1769833,1770311..1770467,1770975..1771094,1773676..1773763,1776740..1776819,1777893..1777979,1778387..1778653,1778792..1779305))
location: region:1679078-1779305:-1
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urn:…
SIO_000300: 1
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SIO_000300: 2
SIO_000628: feature:1778387-1778653:-1:exon

position:1778653:-1
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reference: sequence
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urn:…
SIO_000300: 3
SIO_000628: feature:1777893-1777979:-1:exon

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urn:…
SIO_000300: 38
SIO_000628: feature:1679078-1679697:-1:exon

IARS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: IARS1
product: isoleucyl-tRNA synthetase 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 16 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030458261.1
SIO_010081: IARS1
subclass of: SO_0000673
so part of: IARS1
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position:1778755:-1
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IARS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: IARS1
product: isoleucyl-tRNA synthetase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 16 ESTs, 2 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030458253.1
SIO_010081: IARS1
subclass of: SO_0000673
so part of: IARS1
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position:1775719:-1
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IARS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: IARS1
product: isoleucyl-tRNA synthetase 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 16 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030458258.1
SIO_010081: IARS1
subclass of: SO_0000673
so part of: IARS1
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location: region:1679078-1775627:-1
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position:1775627:-1
position: 1775627
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position:1775557:-1
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IARS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: IARS1
product: isoleucyl-tRNA synthetase 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030458260.1
SIO_010081: IARS1
subclass of: SO_0000673
so part of: IARS1
location: complement(join(1679078..1679697,1684254..1684406,1685370..1685513,1690210..1690335,1691306..1691417,1694918..1695094,1697252..1697347,1697627..1697739,1698133..1698307,1705074..1705157,1705371..1705473,1708276..1708397,1708831..1708908,1709273..1709364,1713745..1713865,1716721..1716868,1718936..1719019,1719682..1719768,1721795..1721989,1722335..1722408,1727219..1727345,1738015..1738113,1742440..1742531,1743881..1744003,1748675..1748770,1750273..1750333,1754270..1754357,1755168..1755315,1758040..1758157,1766766..1766848,1769714..1769833,1770311..1770467,1770975..1771094,1773533..1773574))
location: region:1679078-1773574:-1
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so has part: feature:1716721-1716868:-1:exon
so has part: feature:1713745-1713865:-1:exon
so has part: feature:1709273-1709364:-1:exon
so has part: feature:1708831-1708908:-1:exon
so has part: feature:1708276-1708397:-1:exon
so has part: feature:1705371-1705473:-1:exon
so has part: feature:1705074-1705157:-1:exon
so has part: feature:1698133-1698307:-1:exon
so has part: feature:1697627-1697739:-1:exon
so has part: feature:1697252-1697347:-1:exon
so has part: feature:1694918-1695094:-1:exon
so has part: feature:1691306-1691417:-1:exon
so has part: feature:1690210-1690335:-1:exon
so has part: feature:1685370-1685513:-1:exon
so has part: feature:1684254-1684406:-1:exon
so has part: feature:1679078-1679697:-1:exon

position:1773574:-1
position: 1773574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1773533-1773574:-1:exon

position:1773533:-1
position: 1773533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1770975-1771094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1770311-1770467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1769714-1769833:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1766766-1766848:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1758040-1758157:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1755168-1755315:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1754270-1754357:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1750273-1750333:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1748675-1748770:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1743881-1744003:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1742440-1742531:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1738015-1738113:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1727219-1727345:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1722335-1722408:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1721795-1721989:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1719682-1719768:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1718936-1719019:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1716721-1716868:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1713745-1713865:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1709273-1709364:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1708831-1708908:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1708276-1708397:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1705371-1705473:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1705074-1705157:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1698133-1698307:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1697627-1697739:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1697252-1697347:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1694918-1695094:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1691306-1691417:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1690210-1690335:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1685370-1685513:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1684254-1684406:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1679078-1679697:-1:exon

IARS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: IARS1
product: isoleucyl-tRNA synthetase 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030458259.1
SIO_010081: IARS1
subclass of: SO_0000673
so part of: IARS1
location: complement(join(1679078..1679697,1684254..1684406,1685370..1685513,1690210..1690335,1691306..1691417,1694918..1695094,1697252..1697347,1697627..1697739,1698133..1698307,1705074..1705157,1705371..1705473,1708276..1708397,1708831..1708908,1709273..1709364,1713745..1713865,1716721..1716868,1718936..1719019,1719682..1719768,1721795..1721989,1722335..1722408,1727219..1727345,1738015..1738113,1742440..1742531,1743881..1744003,1748675..1748770,1750273..1750333,1754270..1754357,1755168..1755315,1758040..1758157,1766766..1766848,1769714..1769833,1770311..1770467,1770975..1771094,1772584..1772608))
location: region:1679078-1772608:-1
so has part: feature:1772584-1772608:-1:exon
so has part: feature:1770975-1771094:-1:exon
so has part: feature:1770311-1770467:-1:exon
so has part: feature:1769714-1769833:-1:exon
so has part: feature:1766766-1766848:-1:exon
so has part: feature:1758040-1758157:-1:exon
so has part: feature:1755168-1755315:-1:exon
so has part: feature:1754270-1754357:-1:exon
so has part: feature:1750273-1750333:-1:exon
so has part: feature:1748675-1748770:-1:exon
so has part: feature:1743881-1744003:-1:exon
so has part: feature:1742440-1742531:-1:exon
so has part: feature:1738015-1738113:-1:exon
so has part: feature:1727219-1727345:-1:exon
so has part: feature:1722335-1722408:-1:exon
so has part: feature:1721795-1721989:-1:exon
so has part: feature:1719682-1719768:-1:exon
so has part: feature:1718936-1719019:-1:exon
so has part: feature:1716721-1716868:-1:exon
so has part: feature:1713745-1713865:-1:exon
so has part: feature:1709273-1709364:-1:exon
so has part: feature:1708831-1708908:-1:exon
so has part: feature:1708276-1708397:-1:exon
so has part: feature:1705371-1705473:-1:exon
so has part: feature:1705074-1705157:-1:exon
so has part: feature:1698133-1698307:-1:exon
so has part: feature:1697627-1697739:-1:exon
so has part: feature:1697252-1697347:-1:exon
so has part: feature:1694918-1695094:-1:exon
so has part: feature:1691306-1691417:-1:exon
so has part: feature:1690210-1690335:-1:exon
so has part: feature:1685370-1685513:-1:exon
so has part: feature:1684254-1684406:-1:exon
so has part: feature:1679078-1679697:-1:exon

position:1772608:-1
position: 1772608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1772584-1772608:-1:exon

position:1772584:-1
position: 1772584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1770975-1771094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1770311-1770467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1769714-1769833:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1766766-1766848:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1758040-1758157:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1755168-1755315:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1754270-1754357:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1750273-1750333:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1748675-1748770:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1743881-1744003:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1742440-1742531:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1738015-1738113:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1727219-1727345:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1722335-1722408:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1721795-1721989:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1719682-1719768:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1718936-1719019:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1716721-1716868:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1713745-1713865:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1709273-1709364:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1708831-1708908:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1708276-1708397:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1705371-1705473:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1705074-1705157:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1698133-1698307:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1697627-1697739:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1697252-1697347:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1694918-1695094:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1691306-1691417:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1690210-1690335:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1685370-1685513:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1684254-1684406:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1679078-1679697:-1:exon

IARS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: IARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: isoleucine--tRNA ligase, cytoplasmic isoform X2
translation: MVQQVPENINFPSEEEKILELWKKLNCFQECLKQSKNRPRFNFYDGPPFATGLPHYGHILAGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIEEYNNQCRGIVMRYAKEWEFNVTRLGRWIDFKNDYKTLYPEFMESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYKDVQDPSVIVSFPLDEDTNVSLVAWTTTPWTLPSNLALCVNPELQYVKLRDNATGKIYILMESRLIALYKSDSEYEILDRFPGIVLKGKKYKPIFEYFIQCRDRGAFTVVVDNYVKEEEGTGVVHQAPYFGADDYRVCMDFNIIQKDSVPVCPVDASGCFTAEVTDFAGQYVKDADKNIIKLLKEKGRLVHSSSFRHSYPFCWRVPDFVREKRFGNWLKDARDWAISRNRYWGTPIPLWVSEDFEEVVCVGSIAELEELSGVKVTDLHRESIDHLTIPSRCGKGWLRRVAEVFDCWFESGSMPYAQVHYPFENKKELEDAFPADFIAEGIDQTRGWFYTLLVLSTALFGRPPFKNVIVNGLVLASDGQKMSKRKKNYPDPMNIVNSYGADALRLYLINSPVVRAENLRFKEEGVRDILKDVFLPWYNAYRFLVQNVQILQHKDEGREFLYNENTVKESNNIMDKWILSFTQSLIQFFKAEMAAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGENGTEDCIMALETLFRVLFSMCRLMAPYTPFITELMYQNLKTLIDPASVQEKNTESIHYLMLPQTREDLIDKKIENAVSCLQSVIELGRVIRDRKTIPVKYPLKEVVVIHQDPEALENIRSLEKYILEELNVRQVTLSTNKDKYGVRLRAEPDHMVLGKRLKGEFKVVMAAIKELKSEQLEKFQETGSIVVEGHELHGEDLRLMYTFDQVAGGSAQFEAHSDAQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKRNLVPTDEITVYYRSHPEGDYLDTVIKEHRDFIFATIKAALKPYPVPTSQEVLIQETTQLKGSELEITLLRGGLCHSAGPACAYVNLKVCVNGTEQDGVLLLENPKGDNALSFTGLIDAVSCIFGLKNSKLTVFNGKTEVINKSDLLSLSGKTLHVTTGSAPALISSPDALLCQYINLQLMNAKPQECQKGTVGTLLMENPVGQNGLTYQGLLHETAKVFGLRSRRLKLFLDEAQTHEITKDISMKNLNMKTVYVHVIPTTAEC
SIO_010081: IARS1
subclass of: SO_0000673
so part of: IARS1
location: complement(join(1679615..1679697,1684254..1684406,1685370..1685513,1690210..1690335,1691306..1691417,1694918..1695094,1697252..1697347,1697627..1697739,1698133..1698307,1705074..1705157,1705371..1705473,1708276..1708397,1708831..1708908,1709273..1709364,1713745..1713865,1716721..1716868,1718936..1719019,1719682..1719768,1721795..1721989,1722335..1722408,1727219..1727345,1742440..1742531,1743881..1744003,1748675..1748770,1750273..1750333,1754270..1754357,1755168..1755315,1758040..1758157,1766766..1766848,1769714..1769833,1770311..1770467,1770975..1771093))
location: region:1679615-1771093:-1
so has part: feature:1770975-1771093:-1:exon
so has part: feature:1770311-1770467:-1:exon
so has part: feature:1769714-1769833:-1:exon
so has part: feature:1766766-1766848:-1:exon
so has part: feature:1758040-1758157:-1:exon
so has part: feature:1755168-1755315:-1:exon
so has part: feature:1754270-1754357:-1:exon
so has part: feature:1750273-1750333:-1:exon
so has part: feature:1748675-1748770:-1:exon
so has part: feature:1743881-1744003:-1:exon
so has part: feature:1742440-1742531:-1:exon
so has part: feature:1727219-1727345:-1:exon
so has part: feature:1722335-1722408:-1:exon
so has part: feature:1721795-1721989:-1:exon
so has part: feature:1719682-1719768:-1:exon
so has part: feature:1718936-1719019:-1:exon
so has part: feature:1716721-1716868:-1:exon
so has part: feature:1713745-1713865:-1:exon
so has part: feature:1709273-1709364:-1:exon
so has part: feature:1708831-1708908:-1:exon
so has part: feature:1708276-1708397:-1:exon
so has part: feature:1705371-1705473:-1:exon
so has part: feature:1705074-1705157:-1:exon
so has part: feature:1698133-1698307:-1:exon
so has part: feature:1697627-1697739:-1:exon
so has part: feature:1697252-1697347:-1:exon
so has part: feature:1694918-1695094:-1:exon
so has part: feature:1691306-1691417:-1:exon
so has part: feature:1690210-1690335:-1:exon
so has part: feature:1685370-1685513:-1:exon
so has part: feature:1684254-1684406:-1:exon
so has part: feature:1679615-1679697:-1:exon

XP_030314121.1
type: Protein
SIO_000068: ncbiprotein

position:1679615:-1
position: 1679615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1771093:-1
position: 1771093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1770975-1771093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1770311-1770467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1769714-1769833:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1766766-1766848:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1758040-1758157:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1755168-1755315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1754270-1754357:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1750273-1750333:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1748675-1748770:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1743881-1744003:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1742440-1742531:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1727219-1727345:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1722335-1722408:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1721795-1721989:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1719682-1719768:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1718936-1719019:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1716721-1716868:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1713745-1713865:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1709273-1709364:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1708831-1708908:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1708276-1708397:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1705371-1705473:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1705074-1705157:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1698133-1698307:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1697627-1697739:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1697252-1697347:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1694918-1695094:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1691306-1691417:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1690210-1690335:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1685370-1685513:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1684254-1684406:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1679615-1679697:-1:exon

IARS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: IARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: isoleucine--tRNA ligase, cytoplasmic isoform X1
translation: MVQQVPENINFPSEEEKILELWKKLNCFQECLKQSKNRPRFNFYDGPPFATGLPHYGHILAGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIEEYNNQCRGIVMRYAKEWEFNVTRLGRWIDFKNDYKTLYPEFMESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYKDVQDPSVIVSFPLDEDTNVSLVAWTTTPWTLPSNLALCVNPELQYVKLRDNATGKIYILMESRLIALYKSDSEYEILDRFPGIVLKGKKYKPIFEYFIQCRDRGAFTVVVDNYVKEEEGTGVVHQAPYFGADDYRVCMDFNIIQKDSVPVCPVDASGCFTAEVTDFAGQYVKDADKNIIKLLKEKGRLVHSSSFRHSYPFCWRSDTPLIYKAVPSWFVRVEHMVEKLLENNAQCYWVPDFVREKRFGNWLKDARDWAISRNRYWGTPIPLWVSEDFEEVVCVGSIAELEELSGVKVTDLHRESIDHLTIPSRCGKGWLRRVAEVFDCWFESGSMPYAQVHYPFENKKELEDAFPADFIAEGIDQTRGWFYTLLVLSTALFGRPPFKNVIVNGLVLASDGQKMSKRKKNYPDPMNIVNSYGADALRLYLINSPVVRAENLRFKEEGVRDILKDVFLPWYNAYRFLVQNVQILQHKDEGREFLYNENTVKESNNIMDKWILSFTQSLIQFFKAEMAAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGENGTEDCIMALETLFRVLFSMCRLMAPYTPFITELMYQNLKTLIDPASVQEKNTESIHYLMLPQTREDLIDKKIENAVSCLQSVIELGRVIRDRKTIPVKYPLKEVVVIHQDPEALENIRSLEKYILEELNVRQVTLSTNKDKYGVRLRAEPDHMVLGKRLKGEFKVVMAAIKELKSEQLEKFQETGSIVVEGHELHGEDLRLMYTFDQVAGGSAQFEAHSDAQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKRNLVPTDEITVYYRSHPEGDYLDTVIKEHRDFIFATIKAALKPYPVPTSQEVLIQETTQLKGSELEITLLRGGLCHSAGPACAYVNLKVCVNGTEQDGVLLLENPKGDNALSFTGLIDAVSCIFGLKNSKLTVFNGKTEVINKSDLLSLSGKTLHVTTGSAPALISSPDALLCQYINLQLMNAKPQECQKGTVGTLLMENPVGQNGLTYQGLLHETAKVFGLRSRRLKLFLDEAQTHEITKDISMKNLNMKTVYVHVIPTTAEC
SIO_010081: IARS1
subclass of: SO_0000673
so part of: IARS1
location: complement(join(1679615..1679697,1684254..1684406,1685370..1685513,1690210..1690335,1691306..1691417,1694918..1695094,1697252..1697347,1697627..1697739,1698133..1698307,1705074..1705157,1705371..1705473,1708276..1708397,1708831..1708908,1709273..1709364,1713745..1713865,1716721..1716868,1718936..1719019,1719682..1719768,1721795..1721989,1722335..1722408,1727219..1727345,1738015..1738113,1742440..1742531,1743881..1744003,1748675..1748770,1750273..1750333,1754270..1754357,1755168..1755315,1758040..1758157,1766766..1766848,1769714..1769833,1770311..1770467,1770975..1771093))
location: region:1679615-1771093:-1
so has part: feature:1770975-1771093:-1:exon
so has part: feature:1770311-1770467:-1:exon
so has part: feature:1769714-1769833:-1:exon
so has part: feature:1766766-1766848:-1:exon
so has part: feature:1758040-1758157:-1:exon
so has part: feature:1755168-1755315:-1:exon
so has part: feature:1754270-1754357:-1:exon
so has part: feature:1750273-1750333:-1:exon
so has part: feature:1748675-1748770:-1:exon
so has part: feature:1743881-1744003:-1:exon
so has part: feature:1742440-1742531:-1:exon
so has part: feature:1738015-1738113:-1:exon
so has part: feature:1727219-1727345:-1:exon
so has part: feature:1722335-1722408:-1:exon
so has part: feature:1721795-1721989:-1:exon
so has part: feature:1719682-1719768:-1:exon
so has part: feature:1718936-1719019:-1:exon
so has part: feature:1716721-1716868:-1:exon
so has part: feature:1713745-1713865:-1:exon
so has part: feature:1709273-1709364:-1:exon
so has part: feature:1708831-1708908:-1:exon
so has part: feature:1708276-1708397:-1:exon
so has part: feature:1705371-1705473:-1:exon
so has part: feature:1705074-1705157:-1:exon
so has part: feature:1698133-1698307:-1:exon
so has part: feature:1697627-1697739:-1:exon
so has part: feature:1697252-1697347:-1:exon
so has part: feature:1694918-1695094:-1:exon
so has part: feature:1691306-1691417:-1:exon
so has part: feature:1690210-1690335:-1:exon
so has part: feature:1685370-1685513:-1:exon
so has part: feature:1684254-1684406:-1:exon
so has part: feature:1679615-1679697:-1:exon

XP_030314113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1770975-1771093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1770311-1770467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1769714-1769833:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1766766-1766848:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1758040-1758157:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1755168-1755315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1754270-1754357:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1750273-1750333:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1748675-1748770:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1743881-1744003:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1742440-1742531:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1738015-1738113:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1727219-1727345:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1722335-1722408:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1721795-1721989:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1719682-1719768:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1718936-1719019:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1716721-1716868:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1713745-1713865:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1709273-1709364:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1708831-1708908:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1708276-1708397:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1705371-1705473:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1705074-1705157:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1698133-1698307:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1697627-1697739:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1697252-1697347:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1694918-1695094:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1691306-1691417:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1690210-1690335:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1685370-1685513:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1684254-1684406:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1679615-1679697:-1:exon

IARS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: IARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: isoleucine--tRNA ligase, cytoplasmic isoform X1
translation: MVQQVPENINFPSEEEKILELWKKLNCFQECLKQSKNRPRFNFYDGPPFATGLPHYGHILAGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIEEYNNQCRGIVMRYAKEWEFNVTRLGRWIDFKNDYKTLYPEFMESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYKDVQDPSVIVSFPLDEDTNVSLVAWTTTPWTLPSNLALCVNPELQYVKLRDNATGKIYILMESRLIALYKSDSEYEILDRFPGIVLKGKKYKPIFEYFIQCRDRGAFTVVVDNYVKEEEGTGVVHQAPYFGADDYRVCMDFNIIQKDSVPVCPVDASGCFTAEVTDFAGQYVKDADKNIIKLLKEKGRLVHSSSFRHSYPFCWRSDTPLIYKAVPSWFVRVEHMVEKLLENNAQCYWVPDFVREKRFGNWLKDARDWAISRNRYWGTPIPLWVSEDFEEVVCVGSIAELEELSGVKVTDLHRESIDHLTIPSRCGKGWLRRVAEVFDCWFESGSMPYAQVHYPFENKKELEDAFPADFIAEGIDQTRGWFYTLLVLSTALFGRPPFKNVIVNGLVLASDGQKMSKRKKNYPDPMNIVNSYGADALRLYLINSPVVRAENLRFKEEGVRDILKDVFLPWYNAYRFLVQNVQILQHKDEGREFLYNENTVKESNNIMDKWILSFTQSLIQFFKAEMAAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGENGTEDCIMALETLFRVLFSMCRLMAPYTPFITELMYQNLKTLIDPASVQEKNTESIHYLMLPQTREDLIDKKIENAVSCLQSVIELGRVIRDRKTIPVKYPLKEVVVIHQDPEALENIRSLEKYILEELNVRQVTLSTNKDKYGVRLRAEPDHMVLGKRLKGEFKVVMAAIKELKSEQLEKFQETGSIVVEGHELHGEDLRLMYTFDQVAGGSAQFEAHSDAQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKRNLVPTDEITVYYRSHPEGDYLDTVIKEHRDFIFATIKAALKPYPVPTSQEVLIQETTQLKGSELEITLLRGGLCHSAGPACAYVNLKVCVNGTEQDGVLLLENPKGDNALSFTGLIDAVSCIFGLKNSKLTVFNGKTEVINKSDLLSLSGKTLHVTTGSAPALISSPDALLCQYINLQLMNAKPQECQKGTVGTLLMENPVGQNGLTYQGLLHETAKVFGLRSRRLKLFLDEAQTHEITKDISMKNLNMKTVYVHVIPTTAEC
SIO_010081: IARS1
subclass of: SO_0000673
so part of: IARS1
location: complement(join(1679615..1679697,1684254..1684406,1685370..1685513,1690210..1690335,1691306..1691417,1694918..1695094,1697252..1697347,1697627..1697739,1698133..1698307,1705074..1705157,1705371..1705473,1708276..1708397,1708831..1708908,1709273..1709364,1713745..1713865,1716721..1716868,1718936..1719019,1719682..1719768,1721795..1721989,1722335..1722408,1727219..1727345,1738015..1738113,1742440..1742531,1743881..1744003,1748675..1748770,1750273..1750333,1754270..1754357,1755168..1755315,1758040..1758157,1766766..1766848,1769714..1769833,1770311..1770467,1770975..1771093))
location: region:1679615-1771093:-1
so has part: feature:1770975-1771093:-1:exon
so has part: feature:1770311-1770467:-1:exon
so has part: feature:1769714-1769833:-1:exon
so has part: feature:1766766-1766848:-1:exon
so has part: feature:1758040-1758157:-1:exon
so has part: feature:1755168-1755315:-1:exon
so has part: feature:1754270-1754357:-1:exon
so has part: feature:1750273-1750333:-1:exon
so has part: feature:1748675-1748770:-1:exon
so has part: feature:1743881-1744003:-1:exon
so has part: feature:1742440-1742531:-1:exon
so has part: feature:1738015-1738113:-1:exon
so has part: feature:1727219-1727345:-1:exon
so has part: feature:1722335-1722408:-1:exon
so has part: feature:1721795-1721989:-1:exon
so has part: feature:1719682-1719768:-1:exon
so has part: feature:1718936-1719019:-1:exon
so has part: feature:1716721-1716868:-1:exon
so has part: feature:1713745-1713865:-1:exon
so has part: feature:1709273-1709364:-1:exon
so has part: feature:1708831-1708908:-1:exon
so has part: feature:1708276-1708397:-1:exon
so has part: feature:1705371-1705473:-1:exon
so has part: feature:1705074-1705157:-1:exon
so has part: feature:1698133-1698307:-1:exon
so has part: feature:1697627-1697739:-1:exon
so has part: feature:1697252-1697347:-1:exon
so has part: feature:1694918-1695094:-1:exon
so has part: feature:1691306-1691417:-1:exon
so has part: feature:1690210-1690335:-1:exon
so has part: feature:1685370-1685513:-1:exon
so has part: feature:1684254-1684406:-1:exon
so has part: feature:1679615-1679697:-1:exon

XP_030314114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1770975-1771093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1770311-1770467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1769714-1769833:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1766766-1766848:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1758040-1758157:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1755168-1755315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1754270-1754357:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1750273-1750333:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1748675-1748770:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1743881-1744003:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1742440-1742531:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1738015-1738113:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1727219-1727345:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1722335-1722408:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1721795-1721989:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1719682-1719768:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1718936-1719019:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1716721-1716868:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1713745-1713865:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1709273-1709364:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1708831-1708908:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1708276-1708397:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1705371-1705473:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1705074-1705157:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1698133-1698307:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1697627-1697739:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1697252-1697347:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1694918-1695094:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1691306-1691417:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1690210-1690335:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1685370-1685513:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1684254-1684406:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1679615-1679697:-1:exon

IARS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: IARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: isoleucine--tRNA ligase, cytoplasmic isoform X1
translation: MVQQVPENINFPSEEEKILELWKKLNCFQECLKQSKNRPRFNFYDGPPFATGLPHYGHILAGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIEEYNNQCRGIVMRYAKEWEFNVTRLGRWIDFKNDYKTLYPEFMESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYKDVQDPSVIVSFPLDEDTNVSLVAWTTTPWTLPSNLALCVNPELQYVKLRDNATGKIYILMESRLIALYKSDSEYEILDRFPGIVLKGKKYKPIFEYFIQCRDRGAFTVVVDNYVKEEEGTGVVHQAPYFGADDYRVCMDFNIIQKDSVPVCPVDASGCFTAEVTDFAGQYVKDADKNIIKLLKEKGRLVHSSSFRHSYPFCWRSDTPLIYKAVPSWFVRVEHMVEKLLENNAQCYWVPDFVREKRFGNWLKDARDWAISRNRYWGTPIPLWVSEDFEEVVCVGSIAELEELSGVKVTDLHRESIDHLTIPSRCGKGWLRRVAEVFDCWFESGSMPYAQVHYPFENKKELEDAFPADFIAEGIDQTRGWFYTLLVLSTALFGRPPFKNVIVNGLVLASDGQKMSKRKKNYPDPMNIVNSYGADALRLYLINSPVVRAENLRFKEEGVRDILKDVFLPWYNAYRFLVQNVQILQHKDEGREFLYNENTVKESNNIMDKWILSFTQSLIQFFKAEMAAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGENGTEDCIMALETLFRVLFSMCRLMAPYTPFITELMYQNLKTLIDPASVQEKNTESIHYLMLPQTREDLIDKKIENAVSCLQSVIELGRVIRDRKTIPVKYPLKEVVVIHQDPEALENIRSLEKYILEELNVRQVTLSTNKDKYGVRLRAEPDHMVLGKRLKGEFKVVMAAIKELKSEQLEKFQETGSIVVEGHELHGEDLRLMYTFDQVAGGSAQFEAHSDAQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKRNLVPTDEITVYYRSHPEGDYLDTVIKEHRDFIFATIKAALKPYPVPTSQEVLIQETTQLKGSELEITLLRGGLCHSAGPACAYVNLKVCVNGTEQDGVLLLENPKGDNALSFTGLIDAVSCIFGLKNSKLTVFNGKTEVINKSDLLSLSGKTLHVTTGSAPALISSPDALLCQYINLQLMNAKPQECQKGTVGTLLMENPVGQNGLTYQGLLHETAKVFGLRSRRLKLFLDEAQTHEITKDISMKNLNMKTVYVHVIPTTAEC
SIO_010081: IARS1
subclass of: SO_0000673
so part of: IARS1
location: complement(join(1679615..1679697,1684254..1684406,1685370..1685513,1690210..1690335,1691306..1691417,1694918..1695094,1697252..1697347,1697627..1697739,1698133..1698307,1705074..1705157,1705371..1705473,1708276..1708397,1708831..1708908,1709273..1709364,1713745..1713865,1716721..1716868,1718936..1719019,1719682..1719768,1721795..1721989,1722335..1722408,1727219..1727345,1738015..1738113,1742440..1742531,1743881..1744003,1748675..1748770,1750273..1750333,1754270..1754357,1755168..1755315,1758040..1758157,1766766..1766848,1769714..1769833,1770311..1770467,1770975..1771093))
location: region:1679615-1771093:-1
so has part: feature:1770975-1771093:-1:exon
so has part: feature:1770311-1770467:-1:exon
so has part: feature:1769714-1769833:-1:exon
so has part: feature:1766766-1766848:-1:exon
so has part: feature:1758040-1758157:-1:exon
so has part: feature:1755168-1755315:-1:exon
so has part: feature:1754270-1754357:-1:exon
so has part: feature:1750273-1750333:-1:exon
so has part: feature:1748675-1748770:-1:exon
so has part: feature:1743881-1744003:-1:exon
so has part: feature:1742440-1742531:-1:exon
so has part: feature:1738015-1738113:-1:exon
so has part: feature:1727219-1727345:-1:exon
so has part: feature:1722335-1722408:-1:exon
so has part: feature:1721795-1721989:-1:exon
so has part: feature:1719682-1719768:-1:exon
so has part: feature:1718936-1719019:-1:exon
so has part: feature:1716721-1716868:-1:exon
so has part: feature:1713745-1713865:-1:exon
so has part: feature:1709273-1709364:-1:exon
so has part: feature:1708831-1708908:-1:exon
so has part: feature:1708276-1708397:-1:exon
so has part: feature:1705371-1705473:-1:exon
so has part: feature:1705074-1705157:-1:exon
so has part: feature:1698133-1698307:-1:exon
so has part: feature:1697627-1697739:-1:exon
so has part: feature:1697252-1697347:-1:exon
so has part: feature:1694918-1695094:-1:exon
so has part: feature:1691306-1691417:-1:exon
so has part: feature:1690210-1690335:-1:exon
so has part: feature:1685370-1685513:-1:exon
so has part: feature:1684254-1684406:-1:exon
so has part: feature:1679615-1679697:-1:exon

XP_030314115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1770975-1771093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1770311-1770467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1769714-1769833:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1766766-1766848:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1758040-1758157:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1755168-1755315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1754270-1754357:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1750273-1750333:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1748675-1748770:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1743881-1744003:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1742440-1742531:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1738015-1738113:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1727219-1727345:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1722335-1722408:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1721795-1721989:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1719682-1719768:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1718936-1719019:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1716721-1716868:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1713745-1713865:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1709273-1709364:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1708831-1708908:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1708276-1708397:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1705371-1705473:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1705074-1705157:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1698133-1698307:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1697627-1697739:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1697252-1697347:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1694918-1695094:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1691306-1691417:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1690210-1690335:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1685370-1685513:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1684254-1684406:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1679615-1679697:-1:exon

IARS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: IARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: isoleucine--tRNA ligase, cytoplasmic isoform X1
translation: MVQQVPENINFPSEEEKILELWKKLNCFQECLKQSKNRPRFNFYDGPPFATGLPHYGHILAGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIEEYNNQCRGIVMRYAKEWEFNVTRLGRWIDFKNDYKTLYPEFMESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYKDVQDPSVIVSFPLDEDTNVSLVAWTTTPWTLPSNLALCVNPELQYVKLRDNATGKIYILMESRLIALYKSDSEYEILDRFPGIVLKGKKYKPIFEYFIQCRDRGAFTVVVDNYVKEEEGTGVVHQAPYFGADDYRVCMDFNIIQKDSVPVCPVDASGCFTAEVTDFAGQYVKDADKNIIKLLKEKGRLVHSSSFRHSYPFCWRSDTPLIYKAVPSWFVRVEHMVEKLLENNAQCYWVPDFVREKRFGNWLKDARDWAISRNRYWGTPIPLWVSEDFEEVVCVGSIAELEELSGVKVTDLHRESIDHLTIPSRCGKGWLRRVAEVFDCWFESGSMPYAQVHYPFENKKELEDAFPADFIAEGIDQTRGWFYTLLVLSTALFGRPPFKNVIVNGLVLASDGQKMSKRKKNYPDPMNIVNSYGADALRLYLINSPVVRAENLRFKEEGVRDILKDVFLPWYNAYRFLVQNVQILQHKDEGREFLYNENTVKESNNIMDKWILSFTQSLIQFFKAEMAAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGENGTEDCIMALETLFRVLFSMCRLMAPYTPFITELMYQNLKTLIDPASVQEKNTESIHYLMLPQTREDLIDKKIENAVSCLQSVIELGRVIRDRKTIPVKYPLKEVVVIHQDPEALENIRSLEKYILEELNVRQVTLSTNKDKYGVRLRAEPDHMVLGKRLKGEFKVVMAAIKELKSEQLEKFQETGSIVVEGHELHGEDLRLMYTFDQVAGGSAQFEAHSDAQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKRNLVPTDEITVYYRSHPEGDYLDTVIKEHRDFIFATIKAALKPYPVPTSQEVLIQETTQLKGSELEITLLRGGLCHSAGPACAYVNLKVCVNGTEQDGVLLLENPKGDNALSFTGLIDAVSCIFGLKNSKLTVFNGKTEVINKSDLLSLSGKTLHVTTGSAPALISSPDALLCQYINLQLMNAKPQECQKGTVGTLLMENPVGQNGLTYQGLLHETAKVFGLRSRRLKLFLDEAQTHEITKDISMKNLNMKTVYVHVIPTTAEC
SIO_010081: IARS1
subclass of: SO_0000673
so part of: IARS1
location: complement(join(1679615..1679697,1684254..1684406,1685370..1685513,1690210..1690335,1691306..1691417,1694918..1695094,1697252..1697347,1697627..1697739,1698133..1698307,1705074..1705157,1705371..1705473,1708276..1708397,1708831..1708908,1709273..1709364,1713745..1713865,1716721..1716868,1718936..1719019,1719682..1719768,1721795..1721989,1722335..1722408,1727219..1727345,1738015..1738113,1742440..1742531,1743881..1744003,1748675..1748770,1750273..1750333,1754270..1754357,1755168..1755315,1758040..1758157,1766766..1766848,1769714..1769833,1770311..1770467,1770975..1771093))
location: region:1679615-1771093:-1
so has part: feature:1770975-1771093:-1:exon
so has part: feature:1770311-1770467:-1:exon
so has part: feature:1769714-1769833:-1:exon
so has part: feature:1766766-1766848:-1:exon
so has part: feature:1758040-1758157:-1:exon
so has part: feature:1755168-1755315:-1:exon
so has part: feature:1754270-1754357:-1:exon
so has part: feature:1750273-1750333:-1:exon
so has part: feature:1748675-1748770:-1:exon
so has part: feature:1743881-1744003:-1:exon
so has part: feature:1742440-1742531:-1:exon
so has part: feature:1738015-1738113:-1:exon
so has part: feature:1727219-1727345:-1:exon
so has part: feature:1722335-1722408:-1:exon
so has part: feature:1721795-1721989:-1:exon
so has part: feature:1719682-1719768:-1:exon
so has part: feature:1718936-1719019:-1:exon
so has part: feature:1716721-1716868:-1:exon
so has part: feature:1713745-1713865:-1:exon
so has part: feature:1709273-1709364:-1:exon
so has part: feature:1708831-1708908:-1:exon
so has part: feature:1708276-1708397:-1:exon
so has part: feature:1705371-1705473:-1:exon
so has part: feature:1705074-1705157:-1:exon
so has part: feature:1698133-1698307:-1:exon
so has part: feature:1697627-1697739:-1:exon
so has part: feature:1697252-1697347:-1:exon
so has part: feature:1694918-1695094:-1:exon
so has part: feature:1691306-1691417:-1:exon
so has part: feature:1690210-1690335:-1:exon
so has part: feature:1685370-1685513:-1:exon
so has part: feature:1684254-1684406:-1:exon
so has part: feature:1679615-1679697:-1:exon

XP_030314116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1770975-1771093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1770311-1770467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1769714-1769833:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1766766-1766848:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1758040-1758157:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1755168-1755315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1754270-1754357:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1750273-1750333:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1748675-1748770:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1743881-1744003:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1742440-1742531:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1738015-1738113:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1727219-1727345:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1722335-1722408:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1721795-1721989:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1719682-1719768:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1718936-1719019:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1716721-1716868:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1713745-1713865:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1709273-1709364:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1708831-1708908:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1708276-1708397:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1705371-1705473:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1705074-1705157:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1698133-1698307:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1697627-1697739:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1697252-1697347:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1694918-1695094:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1691306-1691417:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1690210-1690335:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1685370-1685513:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1684254-1684406:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1679615-1679697:-1:exon

IARS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: IARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: isoleucine--tRNA ligase, cytoplasmic isoform X1
translation: MVQQVPENINFPSEEEKILELWKKLNCFQECLKQSKNRPRFNFYDGPPFATGLPHYGHILAGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIEEYNNQCRGIVMRYAKEWEFNVTRLGRWIDFKNDYKTLYPEFMESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYKDVQDPSVIVSFPLDEDTNVSLVAWTTTPWTLPSNLALCVNPELQYVKLRDNATGKIYILMESRLIALYKSDSEYEILDRFPGIVLKGKKYKPIFEYFIQCRDRGAFTVVVDNYVKEEEGTGVVHQAPYFGADDYRVCMDFNIIQKDSVPVCPVDASGCFTAEVTDFAGQYVKDADKNIIKLLKEKGRLVHSSSFRHSYPFCWRSDTPLIYKAVPSWFVRVEHMVEKLLENNAQCYWVPDFVREKRFGNWLKDARDWAISRNRYWGTPIPLWVSEDFEEVVCVGSIAELEELSGVKVTDLHRESIDHLTIPSRCGKGWLRRVAEVFDCWFESGSMPYAQVHYPFENKKELEDAFPADFIAEGIDQTRGWFYTLLVLSTALFGRPPFKNVIVNGLVLASDGQKMSKRKKNYPDPMNIVNSYGADALRLYLINSPVVRAENLRFKEEGVRDILKDVFLPWYNAYRFLVQNVQILQHKDEGREFLYNENTVKESNNIMDKWILSFTQSLIQFFKAEMAAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGENGTEDCIMALETLFRVLFSMCRLMAPYTPFITELMYQNLKTLIDPASVQEKNTESIHYLMLPQTREDLIDKKIENAVSCLQSVIELGRVIRDRKTIPVKYPLKEVVVIHQDPEALENIRSLEKYILEELNVRQVTLSTNKDKYGVRLRAEPDHMVLGKRLKGEFKVVMAAIKELKSEQLEKFQETGSIVVEGHELHGEDLRLMYTFDQVAGGSAQFEAHSDAQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKRNLVPTDEITVYYRSHPEGDYLDTVIKEHRDFIFATIKAALKPYPVPTSQEVLIQETTQLKGSELEITLLRGGLCHSAGPACAYVNLKVCVNGTEQDGVLLLENPKGDNALSFTGLIDAVSCIFGLKNSKLTVFNGKTEVINKSDLLSLSGKTLHVTTGSAPALISSPDALLCQYINLQLMNAKPQECQKGTVGTLLMENPVGQNGLTYQGLLHETAKVFGLRSRRLKLFLDEAQTHEITKDISMKNLNMKTVYVHVIPTTAEC
SIO_010081: IARS1
subclass of: SO_0000673
so part of: IARS1
location: complement(join(1679615..1679697,1684254..1684406,1685370..1685513,1690210..1690335,1691306..1691417,1694918..1695094,1697252..1697347,1697627..1697739,1698133..1698307,1705074..1705157,1705371..1705473,1708276..1708397,1708831..1708908,1709273..1709364,1713745..1713865,1716721..1716868,1718936..1719019,1719682..1719768,1721795..1721989,1722335..1722408,1727219..1727345,1738015..1738113,1742440..1742531,1743881..1744003,1748675..1748770,1750273..1750333,1754270..1754357,1755168..1755315,1758040..1758157,1766766..1766848,1769714..1769833,1770311..1770467,1770975..1771093))
location: region:1679615-1771093:-1
so has part: feature:1770975-1771093:-1:exon
so has part: feature:1770311-1770467:-1:exon
so has part: feature:1769714-1769833:-1:exon
so has part: feature:1766766-1766848:-1:exon
so has part: feature:1758040-1758157:-1:exon
so has part: feature:1755168-1755315:-1:exon
so has part: feature:1754270-1754357:-1:exon
so has part: feature:1750273-1750333:-1:exon
so has part: feature:1748675-1748770:-1:exon
so has part: feature:1743881-1744003:-1:exon
so has part: feature:1742440-1742531:-1:exon
so has part: feature:1738015-1738113:-1:exon
so has part: feature:1727219-1727345:-1:exon
so has part: feature:1722335-1722408:-1:exon
so has part: feature:1721795-1721989:-1:exon
so has part: feature:1719682-1719768:-1:exon
so has part: feature:1718936-1719019:-1:exon
so has part: feature:1716721-1716868:-1:exon
so has part: feature:1713745-1713865:-1:exon
so has part: feature:1709273-1709364:-1:exon
so has part: feature:1708831-1708908:-1:exon
so has part: feature:1708276-1708397:-1:exon
so has part: feature:1705371-1705473:-1:exon
so has part: feature:1705074-1705157:-1:exon
so has part: feature:1698133-1698307:-1:exon
so has part: feature:1697627-1697739:-1:exon
so has part: feature:1697252-1697347:-1:exon
so has part: feature:1694918-1695094:-1:exon
so has part: feature:1691306-1691417:-1:exon
so has part: feature:1690210-1690335:-1:exon
so has part: feature:1685370-1685513:-1:exon
so has part: feature:1684254-1684406:-1:exon
so has part: feature:1679615-1679697:-1:exon

XP_030314118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1770975-1771093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1770311-1770467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1769714-1769833:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1766766-1766848:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1758040-1758157:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1755168-1755315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1754270-1754357:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1750273-1750333:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1748675-1748770:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1743881-1744003:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1742440-1742531:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1738015-1738113:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1727219-1727345:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1722335-1722408:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1721795-1721989:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1719682-1719768:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1718936-1719019:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1716721-1716868:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1713745-1713865:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1709273-1709364:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1708831-1708908:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1708276-1708397:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1705371-1705473:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1705074-1705157:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1698133-1698307:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1697627-1697739:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1697252-1697347:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1694918-1695094:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1691306-1691417:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1690210-1690335:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1685370-1685513:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1684254-1684406:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1679615-1679697:-1:exon

IARS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: IARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: isoleucine--tRNA ligase, cytoplasmic isoform X1
translation: MVQQVPENINFPSEEEKILELWKKLNCFQECLKQSKNRPRFNFYDGPPFATGLPHYGHILAGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIEEYNNQCRGIVMRYAKEWEFNVTRLGRWIDFKNDYKTLYPEFMESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYKDVQDPSVIVSFPLDEDTNVSLVAWTTTPWTLPSNLALCVNPELQYVKLRDNATGKIYILMESRLIALYKSDSEYEILDRFPGIVLKGKKYKPIFEYFIQCRDRGAFTVVVDNYVKEEEGTGVVHQAPYFGADDYRVCMDFNIIQKDSVPVCPVDASGCFTAEVTDFAGQYVKDADKNIIKLLKEKGRLVHSSSFRHSYPFCWRSDTPLIYKAVPSWFVRVEHMVEKLLENNAQCYWVPDFVREKRFGNWLKDARDWAISRNRYWGTPIPLWVSEDFEEVVCVGSIAELEELSGVKVTDLHRESIDHLTIPSRCGKGWLRRVAEVFDCWFESGSMPYAQVHYPFENKKELEDAFPADFIAEGIDQTRGWFYTLLVLSTALFGRPPFKNVIVNGLVLASDGQKMSKRKKNYPDPMNIVNSYGADALRLYLINSPVVRAENLRFKEEGVRDILKDVFLPWYNAYRFLVQNVQILQHKDEGREFLYNENTVKESNNIMDKWILSFTQSLIQFFKAEMAAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGENGTEDCIMALETLFRVLFSMCRLMAPYTPFITELMYQNLKTLIDPASVQEKNTESIHYLMLPQTREDLIDKKIENAVSCLQSVIELGRVIRDRKTIPVKYPLKEVVVIHQDPEALENIRSLEKYILEELNVRQVTLSTNKDKYGVRLRAEPDHMVLGKRLKGEFKVVMAAIKELKSEQLEKFQETGSIVVEGHELHGEDLRLMYTFDQVAGGSAQFEAHSDAQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKRNLVPTDEITVYYRSHPEGDYLDTVIKEHRDFIFATIKAALKPYPVPTSQEVLIQETTQLKGSELEITLLRGGLCHSAGPACAYVNLKVCVNGTEQDGVLLLENPKGDNALSFTGLIDAVSCIFGLKNSKLTVFNGKTEVINKSDLLSLSGKTLHVTTGSAPALISSPDALLCQYINLQLMNAKPQECQKGTVGTLLMENPVGQNGLTYQGLLHETAKVFGLRSRRLKLFLDEAQTHEITKDISMKNLNMKTVYVHVIPTTAEC
SIO_010081: IARS1
subclass of: SO_0000673
so part of: IARS1
location: complement(join(1679615..1679697,1684254..1684406,1685370..1685513,1690210..1690335,1691306..1691417,1694918..1695094,1697252..1697347,1697627..1697739,1698133..1698307,1705074..1705157,1705371..1705473,1708276..1708397,1708831..1708908,1709273..1709364,1713745..1713865,1716721..1716868,1718936..1719019,1719682..1719768,1721795..1721989,1722335..1722408,1727219..1727345,1738015..1738113,1742440..1742531,1743881..1744003,1748675..1748770,1750273..1750333,1754270..1754357,1755168..1755315,1758040..1758157,1766766..1766848,1769714..1769833,1770311..1770467,1770975..1771093))
location: region:1679615-1771093:-1
so has part: feature:1770975-1771093:-1:exon
so has part: feature:1770311-1770467:-1:exon
so has part: feature:1769714-1769833:-1:exon
so has part: feature:1766766-1766848:-1:exon
so has part: feature:1758040-1758157:-1:exon
so has part: feature:1755168-1755315:-1:exon
so has part: feature:1754270-1754357:-1:exon
so has part: feature:1750273-1750333:-1:exon
so has part: feature:1748675-1748770:-1:exon
so has part: feature:1743881-1744003:-1:exon
so has part: feature:1742440-1742531:-1:exon
so has part: feature:1738015-1738113:-1:exon
so has part: feature:1727219-1727345:-1:exon
so has part: feature:1722335-1722408:-1:exon
so has part: feature:1721795-1721989:-1:exon
so has part: feature:1719682-1719768:-1:exon
so has part: feature:1718936-1719019:-1:exon
so has part: feature:1716721-1716868:-1:exon
so has part: feature:1713745-1713865:-1:exon
so has part: feature:1709273-1709364:-1:exon
so has part: feature:1708831-1708908:-1:exon
so has part: feature:1708276-1708397:-1:exon
so has part: feature:1705371-1705473:-1:exon
so has part: feature:1705074-1705157:-1:exon
so has part: feature:1698133-1698307:-1:exon
so has part: feature:1697627-1697739:-1:exon
so has part: feature:1697252-1697347:-1:exon
so has part: feature:1694918-1695094:-1:exon
so has part: feature:1691306-1691417:-1:exon
so has part: feature:1690210-1690335:-1:exon
so has part: feature:1685370-1685513:-1:exon
so has part: feature:1684254-1684406:-1:exon
so has part: feature:1679615-1679697:-1:exon

XP_030314119.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1770975-1771093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1770311-1770467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1769714-1769833:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1766766-1766848:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1758040-1758157:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1755168-1755315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1754270-1754357:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1750273-1750333:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1748675-1748770:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1743881-1744003:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1742440-1742531:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1738015-1738113:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1727219-1727345:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1722335-1722408:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1721795-1721989:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1719682-1719768:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1718936-1719019:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1716721-1716868:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1713745-1713865:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1709273-1709364:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1708831-1708908:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1708276-1708397:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1705371-1705473:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1705074-1705157:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1698133-1698307:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1697627-1697739:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1697252-1697347:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1694918-1695094:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1691306-1691417:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1690210-1690335:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1685370-1685513:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1684254-1684406:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1679615-1679697:-1:exon

IARS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: IARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: isoleucine--tRNA ligase, cytoplasmic isoform X1
translation: MVQQVPENINFPSEEEKILELWKKLNCFQECLKQSKNRPRFNFYDGPPFATGLPHYGHILAGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIEEYNNQCRGIVMRYAKEWEFNVTRLGRWIDFKNDYKTLYPEFMESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYKDVQDPSVIVSFPLDEDTNVSLVAWTTTPWTLPSNLALCVNPELQYVKLRDNATGKIYILMESRLIALYKSDSEYEILDRFPGIVLKGKKYKPIFEYFIQCRDRGAFTVVVDNYVKEEEGTGVVHQAPYFGADDYRVCMDFNIIQKDSVPVCPVDASGCFTAEVTDFAGQYVKDADKNIIKLLKEKGRLVHSSSFRHSYPFCWRSDTPLIYKAVPSWFVRVEHMVEKLLENNAQCYWVPDFVREKRFGNWLKDARDWAISRNRYWGTPIPLWVSEDFEEVVCVGSIAELEELSGVKVTDLHRESIDHLTIPSRCGKGWLRRVAEVFDCWFESGSMPYAQVHYPFENKKELEDAFPADFIAEGIDQTRGWFYTLLVLSTALFGRPPFKNVIVNGLVLASDGQKMSKRKKNYPDPMNIVNSYGADALRLYLINSPVVRAENLRFKEEGVRDILKDVFLPWYNAYRFLVQNVQILQHKDEGREFLYNENTVKESNNIMDKWILSFTQSLIQFFKAEMAAYRLYTVVPRLVKFVDILTNWYVRMNRRRLKGENGTEDCIMALETLFRVLFSMCRLMAPYTPFITELMYQNLKTLIDPASVQEKNTESIHYLMLPQTREDLIDKKIENAVSCLQSVIELGRVIRDRKTIPVKYPLKEVVVIHQDPEALENIRSLEKYILEELNVRQVTLSTNKDKYGVRLRAEPDHMVLGKRLKGEFKVVMAAIKELKSEQLEKFQETGSIVVEGHELHGEDLRLMYTFDQVAGGSAQFEAHSDAQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKRNLVPTDEITVYYRSHPEGDYLDTVIKEHRDFIFATIKAALKPYPVPTSQEVLIQETTQLKGSELEITLLRGGLCHSAGPACAYVNLKVCVNGTEQDGVLLLENPKGDNALSFTGLIDAVSCIFGLKNSKLTVFNGKTEVINKSDLLSLSGKTLHVTTGSAPALISSPDALLCQYINLQLMNAKPQECQKGTVGTLLMENPVGQNGLTYQGLLHETAKVFGLRSRRLKLFLDEAQTHEITKDISMKNLNMKTVYVHVIPTTAEC
SIO_010081: IARS1
subclass of: SO_0000673
so part of: IARS1
location: complement(join(1679615..1679697,1684254..1684406,1685370..1685513,1690210..1690335,1691306..1691417,1694918..1695094,1697252..1697347,1697627..1697739,1698133..1698307,1705074..1705157,1705371..1705473,1708276..1708397,1708831..1708908,1709273..1709364,1713745..1713865,1716721..1716868,1718936..1719019,1719682..1719768,1721795..1721989,1722335..1722408,1727219..1727345,1738015..1738113,1742440..1742531,1743881..1744003,1748675..1748770,1750273..1750333,1754270..1754357,1755168..1755315,1758040..1758157,1766766..1766848,1769714..1769833,1770311..1770467,1770975..1771093))
location: region:1679615-1771093:-1
so has part: feature:1770975-1771093:-1:exon
so has part: feature:1770311-1770467:-1:exon
so has part: feature:1769714-1769833:-1:exon
so has part: feature:1766766-1766848:-1:exon
so has part: feature:1758040-1758157:-1:exon
so has part: feature:1755168-1755315:-1:exon
so has part: feature:1754270-1754357:-1:exon
so has part: feature:1750273-1750333:-1:exon
so has part: feature:1748675-1748770:-1:exon
so has part: feature:1743881-1744003:-1:exon
so has part: feature:1742440-1742531:-1:exon
so has part: feature:1738015-1738113:-1:exon
so has part: feature:1727219-1727345:-1:exon
so has part: feature:1722335-1722408:-1:exon
so has part: feature:1721795-1721989:-1:exon
so has part: feature:1719682-1719768:-1:exon
so has part: feature:1718936-1719019:-1:exon
so has part: feature:1716721-1716868:-1:exon
so has part: feature:1713745-1713865:-1:exon
so has part: feature:1709273-1709364:-1:exon
so has part: feature:1708831-1708908:-1:exon
so has part: feature:1708276-1708397:-1:exon
so has part: feature:1705371-1705473:-1:exon
so has part: feature:1705074-1705157:-1:exon
so has part: feature:1698133-1698307:-1:exon
so has part: feature:1697627-1697739:-1:exon
so has part: feature:1697252-1697347:-1:exon
so has part: feature:1694918-1695094:-1:exon
so has part: feature:1691306-1691417:-1:exon
so has part: feature:1690210-1690335:-1:exon
so has part: feature:1685370-1685513:-1:exon
so has part: feature:1684254-1684406:-1:exon
so has part: feature:1679615-1679697:-1:exon

XP_030314120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1770975-1771093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1770311-1770467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1769714-1769833:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1766766-1766848:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1758040-1758157:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1755168-1755315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1754270-1754357:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1750273-1750333:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1748675-1748770:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1743881-1744003:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1742440-1742531:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1738015-1738113:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1727219-1727345:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1722335-1722408:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1721795-1721989:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1719682-1719768:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1718936-1719019:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1716721-1716868:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1713745-1713865:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1709273-1709364:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1708831-1708908:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1708276-1708397:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1705371-1705473:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1705074-1705157:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1698133-1698307:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1697627-1697739:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1697252-1697347:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1694918-1695094:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1691306-1691417:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1690210-1690335:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1685370-1685513:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1684254-1684406:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1679615-1679697:-1:exon

LOC115599034
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599034
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1772974..1773108)
location: region:1772974-1773108:-1
so has part: feature:1772974-1773108:-1:exon
subclass of: SO_0000578

115599034
type: Gene
SIO_000068: ncbigene

position:1772974:-1
position: 1772974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1773108:-1
position: 1773108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1772974-1773108:-1:exon

LOC115599034
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: snoRNA
gene: LOC115599034
product: small nucleolar RNA SNORA84
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01229
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003988096.1
SIO_010081: LOC115599034
subclass of: SO_0000673
so part of: LOC115599034
location: complement(1772974..1773108)
location: region:1772974-1773108:-1
so has part: feature:1772974-1773108:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1772974-1773108:-1:exon

LOC115599007
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599007
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1785640..1814097)
location: region:1785640-1814097:-1
so has part: feature:1785640-1814097:-1:exon
subclass of: SO_0000011

115599007
type: Gene
SIO_000068: ncbigene

position:1785640:-1
position: 1785640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1814097:-1
position: 1814097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1785640-1814097:-1:exon

LOC115599007
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599007
product: uncharacterized LOC115599007, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988071.1
SIO_010081: LOC115599007
subclass of: SO_0000673
so part of: LOC115599007
location: complement(join(1785640..1785747,1799715..1799789,1813497..1813598,1813962..1814097))
location: region:1785640-1814097:-1
so has part: feature:1813962-1814097:-1:exon
so has part: feature:1813497-1813598:-1:exon
so has part: feature:1799715-1799789:-1:exon
so has part: feature:1785640-1785747:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1813962-1814097:-1:exon

position:1813962:-1
position: 1813962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1813497-1813598:-1:exon

position:1813497:-1
position: 1813497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1813598:-1
position: 1813598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1799715-1799789:-1:exon

position:1799715:-1
position: 1799715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1799789:-1
position: 1799789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1785640-1785747:-1:exon

position:1785747:-1
position: 1785747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115599007
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599007
product: uncharacterized LOC115599007, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988070.1
SIO_010081: LOC115599007
subclass of: SO_0000673
so part of: LOC115599007
location: complement(join(1789473..1789615,1799715..1799789,1813497..1813598,1813962..1814097))
location: region:1789473-1814097:-1
so has part: feature:1813962-1814097:-1:exon
so has part: feature:1813497-1813598:-1:exon
so has part: feature:1799715-1799789:-1:exon
so has part: feature:1789473-1789615:-1:exon

position:1789473:-1
position: 1789473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1813962-1814097:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1813497-1813598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1799715-1799789:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1789473-1789615:-1:exon

position:1789615:-1
position: 1789615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115599007
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599007
product: uncharacterized LOC115599007, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988069.1
SIO_010081: LOC115599007
subclass of: SO_0000673
so part of: LOC115599007
location: complement(join(1789473..1789615,1790266..1790415,1799715..1799789,1813497..1813598,1813962..1814097))
location: region:1789473-1814097:-1
so has part: feature:1813962-1814097:-1:exon
so has part: feature:1813497-1813598:-1:exon
so has part: feature:1799715-1799789:-1:exon
so has part: feature:1790266-1790415:-1:exon
so has part: feature:1789473-1789615:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1813962-1814097:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1813497-1813598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1799715-1799789:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1790266-1790415:-1:exon

position:1790266:-1
position: 1790266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1790415:-1
position: 1790415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1789473-1789615:-1:exon

LOC115599026
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599026
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1823619..1828207
location: region:1823619-1828207:1
so has part: feature:1823619-1828207:1:exon
subclass of: SO_0000010

115599026
type: Gene
SIO_000068: ncbigene

position:1823619:1
position: 1823619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1828207:1
position: 1828207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1823619-1828207:1:exon

LOC115599026
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC115599026
product: protein bicaudal D homolog 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030458725.1
SIO_010081: LOC115599026
subclass of: SO_0000673
so part of: LOC115599026
location: join(1823619..1824071,1825116..1825265,1825466..1826406,1826813..1826964,1827342..1828207)
location: region:1823619-1828207:1
so has part: feature:1823619-1824071:1:exon
so has part: feature:1825116-1825265:1:exon
so has part: feature:1825466-1826406:1:exon
so has part: feature:1826813-1826964:1:exon
so has part: feature:1827342-1828207:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1823619-1824071:1:exon

position:1824071:1
position: 1824071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1825116-1825265:1:exon

position:1825116:1
position: 1825116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1825265:1
position: 1825265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1825466-1826406:1:exon

position:1825466:1
position: 1825466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1826406:1
position: 1826406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1826813-1826964:1:exon

position:1826813:1
position: 1826813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1826964:1
position: 1826964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1827342-1828207:1:exon

position:1827342:1
position: 1827342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115599026
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC115599026
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein bicaudal D homolog 2-like
translation: MSLSMEEEEYGRLVMESEPEWLRSEIKRLFQELGETTREKIQAAEYGLAVLEEKQQLKQQYEELELEYETIRTEMEQLKEMFVKHLQPSHRVDIILMAIKNMKEPGQYSRSCLPTC
SIO_010081: LOC115599026
subclass of: SO_0000673
so part of: LOC115599026
location: join(1823832..1824071,1825116..1825226)
location: region:1823832-1825226:1
so has part: feature:1823832-1824071:1:exon
so has part: feature:1825116-1825226:1:exon

XP_030314585.1
type: Protein
SIO_000068: ncbiprotein

position:1823832:1
position: 1823832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1825226:1
position: 1825226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1823832-1824071:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1825116-1825226:1:exon

LOC115599027
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599027
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1829068..1834582)
location: region:1829068-1834582:-1
so has part: feature:1829068-1834582:-1:exon
subclass of: SO_0000011

115599027
type: Gene
SIO_000068: ncbigene

position:1829068:-1
position: 1829068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1834582:-1
position: 1834582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1829068-1834582:-1:exon

LOC115599027
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599027
product: uncharacterized LOC115599027
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988090.1
SIO_010081: LOC115599027
subclass of: SO_0000673
so part of: LOC115599027
location: complement(join(1829068..1829831,1833861..1834127,1834415..1834582))
location: region:1829068-1834582:-1
so has part: feature:1834415-1834582:-1:exon
so has part: feature:1833861-1834127:-1:exon
so has part: feature:1829068-1829831:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1834415-1834582:-1:exon

position:1834415:-1
position: 1834415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1833861-1834127:-1:exon

position:1833861:-1
position: 1833861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1834127:-1
position: 1834127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1829068-1829831:-1:exon

position:1829831:-1
position: 1829831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BICD2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: BICD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1834842..1918999
location: region:1834842-1918999:1
so has part: feature:1834842-1918999:1:exon
subclass of: SO_0000010

103539660
type: Gene
SIO_000068: ncbigene

position:1834842:1
position: 1834842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1918999:1
position: 1918999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1834842-1918999:1:exon

BICD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: BICD2
product: BICD cargo adaptor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 3 long SRA reads, 17 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030458356.1
SIO_010081: BICD2
subclass of: SO_0000673
so part of: BICD2
location: join(1834842..1835293,1882200..1882412,1899847..1899999,1902370..1902822,1903649..1904668,1905735..1905886,1913433..1913643,1916840..1918999)
location: region:1834842-1918999:1
so has part: feature:1834842-1835293:1:exon
so has part: feature:1882200-1882412:1:exon
so has part: feature:1899847-1899999:1:exon
so has part: feature:1902370-1902822:1:exon
so has part: feature:1903649-1904668:1:exon
so has part: feature:1905735-1905886:1:exon
so has part: feature:1913433-1913643:1:exon
so has part: feature:1916840-1918999:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1834842-1835293:1:exon

position:1835293:1
position: 1835293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1882200-1882412:1:exon

position:1882200:1
position: 1882200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1882412:1
position: 1882412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1899847-1899999:1:exon

position:1899847:1
position: 1899847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1899999:1
position: 1899999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1902370-1902822:1:exon

position:1902370:1
position: 1902370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1902822:1
position: 1902822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1903649-1904668:1:exon

position:1903649:1
position: 1903649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1904668:1
position: 1904668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1905735-1905886:1:exon

position:1905735:1
position: 1905735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1905886:1
position: 1905886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1913433-1913643:1:exon

position:1913433:1
position: 1913433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1913643:1
position: 1913643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1916840-1918999:1:exon

position:1916840:1
position: 1916840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BICD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: BICD2
product: BICD cargo adaptor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 3 long SRA reads, 22 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_030458355.1
SIO_010081: BICD2
subclass of: SO_0000673
so part of: BICD2
location: join(1834842..1835293,1882200..1882412,1899847..1899999,1902370..1902822,1903649..1904668,1905735..1905886,1913433..1914083)
location: region:1834842-1914083:1
so has part: feature:1834842-1835293:1:exon
so has part: feature:1882200-1882412:1:exon
so has part: feature:1899847-1899999:1:exon
so has part: feature:1902370-1902822:1:exon
so has part: feature:1903649-1904668:1:exon
so has part: feature:1905735-1905886:1:exon
so has part: feature:1913433-1914083:1:exon

position:1914083:1
position: 1914083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1834842-1835293:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1882200-1882412:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1899847-1899999:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1902370-1902822:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1903649-1904668:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1905735-1905886:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1913433-1914083:1:exon

BICD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: BICD2
product: BICD cargo adaptor 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030458357.1
SIO_010081: BICD2
subclass of: SO_0000673
so part of: BICD2
location: join(1834902..1835293,1882200..1882412,1899847..1899999,1902370..1902822,1903649..1904668,1905735..1905886,1913433..1913623,1916840..1918999)
location: region:1834902-1918999:1
so has part: feature:1834902-1835293:1:exon
so has part: feature:1882200-1882412:1:exon
so has part: feature:1899847-1899999:1:exon
so has part: feature:1902370-1902822:1:exon
so has part: feature:1903649-1904668:1:exon
so has part: feature:1905735-1905886:1:exon
so has part: feature:1913433-1913623:1:exon
so has part: feature:1916840-1918999:1:exon

position:1834902:1
position: 1834902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1834902-1835293:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1882200-1882412:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1899847-1899999:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1902370-1902822:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1903649-1904668:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1905735-1905886:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1913433-1913623:1:exon

position:1913623:1
position: 1913623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1916840-1918999:1:exon

BICD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: BICD2
product: BICD cargo adaptor 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030458358.1
SIO_010081: BICD2
subclass of: SO_0000673
so part of: BICD2
location: join(1834902..1835293,1882200..1882412,1899847..1899999,1902370..1902822,1903649..1904668,1905735..1905886,1913433..1913598,1916840..1918999)
location: region:1834902-1918999:1
so has part: feature:1834902-1835293:1:exon
so has part: feature:1882200-1882412:1:exon
so has part: feature:1899847-1899999:1:exon
so has part: feature:1902370-1902822:1:exon
so has part: feature:1903649-1904668:1:exon
so has part: feature:1905735-1905886:1:exon
so has part: feature:1913433-1913598:1:exon
so has part: feature:1916840-1918999:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1834902-1835293:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1882200-1882412:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1899847-1899999:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1902370-1902822:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1903649-1904668:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1905735-1905886:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1913433-1913598:1:exon

position:1913598:1
position: 1913598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1916840-1918999:1:exon

BICD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: BICD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein bicaudal D homolog 2 isoform X3
translation: MSLSMEEEEYGRLVMESEPEWLRSEIKRLFQELGETTREKIQAAEYGLAVLEEKQQLKQQYEELELEYETIRTEMEQLKEAFGQAHTNHKKVAADGESREETLIQESATKEEYYMKKVMELQTELKQLRNVLANTQSENERLNSLAQELKEVNQNVEIQRARLRDDIKEYKFREARLLQDYTELEEENICLQKQVSVLKQNQVEFEGLKHEIKRLEEETEFLNSQLEDAIRLKEISERQLEEALETLKTEREQKNNLRKELSHYMNINDSMYNSHLNISLDGLKFSDEATEPNNDEIINGFEQNCLSKLSNGKNNTSTPKKNESFPPAPSLVSDLLSELNISEIQKLKQQLVQMEREKVNLLTTLQESQKQLENTRGALSEQHEKVGRLTENLNAMKKLQISKERQSALDNEKDRDSHEDGDYYEVDINGPEILECKYKVAVAEITDLKEELKDLKAKYKECESKYEEEKGRYETESQALTEKITSLEKSSRHDREQVARLEKELKKVSDVAGETQGSLSVAQDELVTFSEELANLYHHVCMCNNETPNRVMLDYYKEGKGGRSSPETKGRRSPILLSKGLLTIELGKAENGSSDSSPSPVSSLPSPVSDTQKEPMNIYNLIAIIRDQIKHLQAAVDRTTELSRQRVATQELGPVVDKDKEALMEEILKLKSLLSTKREQIATLRTVLKANKQTAEVALANLKSKYENEKAMVTETMMKLRNELKALKEDAATFSSLRAMFATRCDEYVTQLDEMQRQLAAAEDEKKTLNSLLRMAIQQKLALTQRLEHLELDHEQSKRVRTKSASKAVE
SIO_010081: BICD2
subclass of: SO_0000673
so part of: BICD2
location: join(1835054..1835293,1882200..1882412,1899847..1899999,1902370..1902822,1903649..1904668,1905735..1905886,1913433..1913623,1916840..1916850)
location: region:1835054-1916850:1
so has part: feature:1835054-1835293:1:exon
so has part: feature:1882200-1882412:1:exon
so has part: feature:1899847-1899999:1:exon
so has part: feature:1902370-1902822:1:exon
so has part: feature:1903649-1904668:1:exon
so has part: feature:1905735-1905886:1:exon
so has part: feature:1913433-1913623:1:exon
so has part: feature:1916840-1916850:1:exon

XP_030314217.1
type: Protein
SIO_000068: ncbiprotein

position:1835054:1
position: 1835054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1916850:1
position: 1916850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1835054-1835293:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1882200-1882412:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1899847-1899999:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1902370-1902822:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1903649-1904668:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1905735-1905886:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1913433-1913623:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1916840-1916850:1:exon

BICD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: BICD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein bicaudal D homolog 2 isoform X2
translation: MSLSMEEEEYGRLVMESEPEWLRSEIKRLFQELGETTREKIQAAEYGLAVLEEKQQLKQQYEELELEYETIRTEMEQLKEAFGQAHTNHKKVAADGESREETLIQESATKEEYYMKKVMELQTELKQLRNVLANTQSENERLNSLAQELKEVNQNVEIQRARLRDDIKEYKFREARLLQDYTELEEENICLQKQVSVLKQNQVEFEGLKHEIKRLEEETEFLNSQLEDAIRLKEISERQLEEALETLKTEREQKNNLRKELSHYMNINDSMYNSHLNISLDGLKFSDEATEPNNDEIINGFEQNCLSKLSNGKNNTSTPKKNESFPPAPSLVSDLLSELNISEIQKLKQQLVQMEREKVNLLTTLQESQKQLENTRGALSEQHEKVGRLTENLNAMKKLQISKERQSALDNEKDRDSHEDGDYYEVDINGPEILECKYKVAVAEITDLKEELKDLKAKYKECESKYEEEKGRYETESQALTEKITSLEKSSRHDREQVARLEKELKKVSDVAGETQGSLSVAQDELVTFSEELANLYHHVCMCNNETPNRVMLDYYKEGKGGRSSPETKGRRSPILLSKGLLTIELGKAENGSSDSSPSPVSSLPSPVSDTQKEPMNIYNLIAIIRDQIKHLQAAVDRTTELSRQRVATQELGPVVDKDKEALMEEILKLKSLLSTKREQIATLRTVLKANKQTAEVALANLKSKYENEKAMVTETMMKLRNELKALKEDAATFSSLRAMFATRCDEYVTQLDEMQRQLAAAEDEKKTLNSLLRMAIQQKLALTQRLEHLELDHEQSKRVRTKSASKGKGSNPSL
SIO_010081: BICD2
subclass of: SO_0000673
so part of: BICD2
location: join(1835054..1835293,1882200..1882412,1899847..1899999,1902370..1902822,1903649..1904668,1905735..1905886,1913433..1913643,1916840..1916845)
location: region:1835054-1916845:1
so has part: feature:1835054-1835293:1:exon
so has part: feature:1882200-1882412:1:exon
so has part: feature:1899847-1899999:1:exon
so has part: feature:1902370-1902822:1:exon
so has part: feature:1903649-1904668:1:exon
so has part: feature:1905735-1905886:1:exon
so has part: feature:1913433-1913643:1:exon
so has part: feature:1916840-1916845:1:exon

XP_030314216.1
type: Protein
SIO_000068: ncbiprotein

position:1916845:1
position: 1916845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1835054-1835293:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1882200-1882412:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1899847-1899999:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1902370-1902822:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1903649-1904668:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1905735-1905886:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1913433-1913643:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1916840-1916845:1:exon

BICD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: BICD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein bicaudal D homolog 2 isoform X4
translation: MSLSMEEEEYGRLVMESEPEWLRSEIKRLFQELGETTREKIQAAEYGLAVLEEKQQLKQQYEELELEYETIRTEMEQLKEAFGQAHTNHKKVAADGESREETLIQESATKEEYYMKKVMELQTELKQLRNVLANTQSENERLNSLAQELKEVNQNVEIQRARLRDDIKEYKFREARLLQDYTELEEENICLQKQVSVLKQNQVEFEGLKHEIKRLEEETEFLNSQLEDAIRLKEISERQLEEALETLKTEREQKNNLRKELSHYMNINDSMYNSHLNISLDGLKFSDEATEPNNDEIINGFEQNCLSKLSNGKNNTSTPKKNESFPPAPSLVSDLLSELNISEIQKLKQQLVQMEREKVNLLTTLQESQKQLENTRGALSEQHEKVGRLTENLNAMKKLQISKERQSALDNEKDRDSHEDGDYYEVDINGPEILECKYKVAVAEITDLKEELKDLKAKYKECESKYEEEKGRYETESQALTEKITSLEKSSRHDREQVARLEKELKKVSDVAGETQGSLSVAQDELVTFSEELANLYHHVCMCNNETPNRVMLDYYKEGKGGRSSPETKGRRSPILLSKGLLTIELGKAENGSSDSSPSPVSSLPSPVSDTQKEPMNIYNLIAIIRDQIKHLQAAVDRTTELSRQRVATQELGPVVDKDKEALMEEILKLKSLLSTKREQIATLRTVLKANKQTAEVALANLKSKYENEKAMVTETMMKLRNELKALKEDAATFSSLRAMFATRCDEYVTQLDEMQRQLAAAEDEKKTLNSLLRMAIQQKLALTQRLEHLELDHEQSKRL
SIO_010081: BICD2
subclass of: SO_0000673
so part of: BICD2
location: join(1835054..1835293,1882200..1882412,1899847..1899999,1902370..1902822,1903649..1904668,1905735..1905886,1913433..1913598,1916840..1916845)
location: region:1835054-1916845:1
so has part: feature:1835054-1835293:1:exon
so has part: feature:1882200-1882412:1:exon
so has part: feature:1899847-1899999:1:exon
so has part: feature:1902370-1902822:1:exon
so has part: feature:1903649-1904668:1:exon
so has part: feature:1905735-1905886:1:exon
so has part: feature:1913433-1913598:1:exon
so has part: feature:1916840-1916845:1:exon

XP_030314218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1835054-1835293:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1882200-1882412:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1899847-1899999:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1902370-1902822:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1903649-1904668:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1905735-1905886:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1913433-1913598:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1916840-1916845:1:exon

BICD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: BICD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein bicaudal D homolog 2 isoform X1
translation: MSLSMEEEEYGRLVMESEPEWLRSEIKRLFQELGETTREKIQAAEYGLAVLEEKQQLKQQYEELELEYETIRTEMEQLKEAFGQAHTNHKKVAADGESREETLIQESATKEEYYMKKVMELQTELKQLRNVLANTQSENERLNSLAQELKEVNQNVEIQRARLRDDIKEYKFREARLLQDYTELEEENICLQKQVSVLKQNQVEFEGLKHEIKRLEEETEFLNSQLEDAIRLKEISERQLEEALETLKTEREQKNNLRKELSHYMNINDSMYNSHLNISLDGLKFSDEATEPNNDEIINGFEQNCLSKLSNGKNNTSTPKKNESFPPAPSLVSDLLSELNISEIQKLKQQLVQMEREKVNLLTTLQESQKQLENTRGALSEQHEKVGRLTENLNAMKKLQISKERQSALDNEKDRDSHEDGDYYEVDINGPEILECKYKVAVAEITDLKEELKDLKAKYKECESKYEEEKGRYETESQALTEKITSLEKSSRHDREQVARLEKELKKVSDVAGETQGSLSVAQDELVTFSEELANLYHHVCMCNNETPNRVMLDYYKEGKGGRSSPETKGRRSPILLSKGLLTIELGKAENGSSDSSPSPVSSLPSPVSDTQKEPMNIYNLIAIIRDQIKHLQAAVDRTTELSRQRVATQELGPVVDKDKEALMEEILKLKSLLSTKREQIATLRTVLKANKQTAEVALANLKSKYENEKAMVTETMMKLRNELKALKEDAATFSSLRAMFATRCDEYVTQLDEMQRQLAAAEDEKKTLNSLLRMAIQQKLALTQRLEHLELDHEQSKRVRTKSASKGKGSNPSVSHLRSCGDRPEGSVLNNQVFCSEKYKICCD
SIO_010081: BICD2
subclass of: SO_0000673
so part of: BICD2
location: join(1835054..1835293,1882200..1882412,1899847..1899999,1902370..1902822,1903649..1904668,1905735..1905886,1913433..1913739)
location: region:1835054-1913739:1
so has part: feature:1835054-1835293:1:exon
so has part: feature:1882200-1882412:1:exon
so has part: feature:1899847-1899999:1:exon
so has part: feature:1902370-1902822:1:exon
so has part: feature:1903649-1904668:1:exon
so has part: feature:1905735-1905886:1:exon
so has part: feature:1913433-1913739:1:exon

XP_030314215.1
type: Protein
SIO_000068: ncbiprotein

position:1913739:1
position: 1913739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1835054-1835293:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1882200-1882412:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1899847-1899999:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1902370-1902822:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1903649-1904668:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1905735-1905886:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1913433-1913739:1:exon

LOC115599025
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599025
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1920762..1928812
location: region:1920762-1928812:1
so has part: feature:1920762-1928812:1:exon
subclass of: SO_0000011

115599025
type: Gene
SIO_000068: ncbigene

position:1920762:1
position: 1920762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1928812:1
position: 1928812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1920762-1928812:1:exon

LOC115599025
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599025
product: uncharacterized LOC115599025
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988089.1
SIO_010081: LOC115599025
subclass of: SO_0000673
so part of: LOC115599025
location: join(1920762..1920803,1925386..1925460,1928574..1928812)
location: region:1920762-1928812:1
so has part: feature:1920762-1920803:1:exon
so has part: feature:1925386-1925460:1:exon
so has part: feature:1928574-1928812:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1920762-1920803:1:exon

position:1920803:1
position: 1920803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1925386-1925460:1:exon

position:1925386:1
position: 1925386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1925460:1
position: 1925460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1928574-1928812:1:exon

position:1928574:1
position: 1928574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGD3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: FGD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1934881..2043010
location: region:1934881-2043010:1
so has part: feature:1934881-2043010:1:exon
subclass of: SO_0000010

103539650
type: Gene
SIO_000068: ncbigene

position:1934881:1
position: 1934881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2043010:1
position: 2043010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1934881-2043010:1:exon

FGD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FGD3
product: FYVE, RhoGEF and PH domain containing 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 21 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030458600.1
SIO_010081: FGD3
subclass of: SO_0000673
so part of: FGD3
location: join(1934881..1935088,1990709..1990879,1999711..1999879,2000981..2001578,2009899..2009988,2011179..2011315,2012456..2012612,2014343..2014481,2015275..2015333,2017440..2017586,2018074..2018166,2018645..2018724,2019150..2019180,2019442..2019543,2023804..2023863,2030369..2030491,2031887..2032039,2034409..2034549,2041649..2043010)
location: region:1934881-2043010:1
so has part: feature:1934881-1935088:1:exon
so has part: feature:1990709-1990879:1:exon
so has part: feature:1999711-1999879:1:exon
so has part: feature:2000981-2001578:1:exon
so has part: feature:2009899-2009988:1:exon
so has part: feature:2011179-2011315:1:exon
so has part: feature:2012456-2012612:1:exon
so has part: feature:2014343-2014481:1:exon
so has part: feature:2015275-2015333:1:exon
so has part: feature:2017440-2017586:1:exon
so has part: feature:2018074-2018166:1:exon
so has part: feature:2018645-2018724:1:exon
so has part: feature:2019150-2019180:1:exon
so has part: feature:2019442-2019543:1:exon
so has part: feature:2023804-2023863:1:exon
so has part: feature:2030369-2030491:1:exon
so has part: feature:2031887-2032039:1:exon
so has part: feature:2034409-2034549:1:exon
so has part: feature:2041649-2043010:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1934881-1935088:1:exon

position:1935088:1
position: 1935088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1990709-1990879:1:exon

position:1990709:1
position: 1990709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1990879:1
position: 1990879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1999711-1999879:1:exon

position:1999711:1
position: 1999711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1999879:1
position: 1999879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2000981-2001578:1:exon

position:2000981:1
position: 2000981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2001578:1
position: 2001578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2009899-2009988:1:exon

position:2009899:1
position: 2009899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2009988:1
position: 2009988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2011179-2011315:1:exon

position:2011179:1
position: 2011179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2011315:1
position: 2011315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2012456-2012612:1:exon

position:2012456:1
position: 2012456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2012612:1
position: 2012612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2014343-2014481:1:exon

position:2014343:1
position: 2014343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2014481:1
position: 2014481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2015275-2015333:1:exon

position:2015275:1
position: 2015275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2015333:1
position: 2015333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2017440-2017586:1:exon

position:2017440:1
position: 2017440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2017586:1
position: 2017586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2018074-2018166:1:exon

position:2018074:1
position: 2018074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2018166:1
position: 2018166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2018645-2018724:1:exon

position:2018645:1
position: 2018645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2018724:1
position: 2018724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2019150-2019180:1:exon

position:2019150:1
position: 2019150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2019180:1
position: 2019180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2019442-2019543:1:exon

position:2019442:1
position: 2019442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2019543:1
position: 2019543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2023804-2023863:1:exon

position:2023804:1
position: 2023804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2023863:1
position: 2023863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2030369-2030491:1:exon

position:2030369:1
position: 2030369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2030491:1
position: 2030491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2031887-2032039:1:exon

position:2031887:1
position: 2031887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2032039:1
position: 2032039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2034409-2034549:1:exon

position:2034409:1
position: 2034409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2034549:1
position: 2034549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2041649-2043010:1:exon

position:2041649:1
position: 2041649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FGD3
product: FYVE, RhoGEF and PH domain containing 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 19 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030458601.1
SIO_010081: FGD3
subclass of: SO_0000673
so part of: FGD3
location: join(1934881..1935088,1999711..1999879,2000981..2001578,2009899..2009988,2011179..2011315,2012456..2012612,2014343..2014481,2015275..2015333,2017440..2017586,2018074..2018166,2018645..2018724,2019150..2019180,2019442..2019543,2023804..2023863,2030369..2030491,2031887..2032039,2034409..2034549,2041649..2043010)
location: region:1934881-2043010:1
so has part: feature:1934881-1935088:1:exon
so has part: feature:1999711-1999879:1:exon
so has part: feature:2000981-2001578:1:exon
so has part: feature:2009899-2009988:1:exon
so has part: feature:2011179-2011315:1:exon
so has part: feature:2012456-2012612:1:exon
so has part: feature:2014343-2014481:1:exon
so has part: feature:2015275-2015333:1:exon
so has part: feature:2017440-2017586:1:exon
so has part: feature:2018074-2018166:1:exon
so has part: feature:2018645-2018724:1:exon
so has part: feature:2019150-2019180:1:exon
so has part: feature:2019442-2019543:1:exon
so has part: feature:2023804-2023863:1:exon
so has part: feature:2030369-2030491:1:exon
so has part: feature:2031887-2032039:1:exon
so has part: feature:2034409-2034549:1:exon
so has part: feature:2041649-2043010:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1934881-1935088:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1999711-1999879:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2000981-2001578:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2009899-2009988:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2011179-2011315:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2012456-2012612:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2014343-2014481:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2015275-2015333:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2017440-2017586:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2018074-2018166:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2018645-2018724:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2019150-2019180:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2019442-2019543:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2023804-2023863:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2030369-2030491:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2031887-2032039:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2034409-2034549:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2041649-2043010:1:exon

FGD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FGD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FYVE, RhoGEF and PH domain-containing protein 3 isoform X1
translation: MQLQWEGEETHPPRSAAAFVTAQPGALPGPTRSSSGSVGERWREQMEPEGCPCSPFPIKCHIESNPVLEACGELQHISPSQCIHQTGRKPKTKTPLAKMHPLQKPQVPPKPVHLKPGQERIPPAPSRPLPADPKSSRSLAPGEEEIPVSAGVNTLIEKFESIRQPVHILQRNQLNLTLKMEPTLDSSKQPSSCDCDMVASSTSSTNEKSEADEKEPDIPCSGDLSNTDIMKIKELSIGDNKSHEDCGAVTVSKEASGELGSKDSTAELNGNGKIPNRDSGIDSPSCSVAGESFPSEDGAEQKKPSMAGSPGEVEPEKKGTKPSSLEQKRDSMQDEDSDIDEGSSEEQETAEVPKLEYLDVNKCTEPQKLFNIANELLHTEEAYVKRLHLLDQVFCTKLSEAGISSEVVTGIFSNISSIYCFHGQFLLPELKTRITQEWNINPRLGDILQKLAPFLKMYGEYVKNFDRAMDLVNTCMQRSSAFKDVVQNIQKQEVCGNLTLQHHMLEPVQRIPRYELLLKDYLKKLPEESPDRKDAEKSLELISTAANHSNAAIRKMEKMHKLLEVYERLGGEEDIVNPANELIKEGHIQKLSAKNGTAQDRYLFLFNSMVLYCVPKLRLIGQKFSVREKMDIAGLQVQEIAKQNVAHTFSITGKKRSLELQARTEEEKREWIQVIQATIEKHKQNSETFRAFNSSFSQEEEHLPDSSIASTSSVESMPGADGGVFGGSDSCRKSSKSKRDKEKQACKSCSESFNSITKRRHHCKQCGAVICAKCSEFKPLADNSRHNRVCKECFLQLPASPCSPGVETVGEQKKRSAAEKQSIFAVENSVFSSYLQFLEKGKTWYKMWVTIPKTEPLVLYLQGSSQDVRSPRPIPLPGYEVSFPGSGEKFEAKHVFKLCQSQQTLYFSAEDEELQIKWMEILTKAAKGETEDAAEGLSNP
SIO_010081: FGD3
subclass of: SO_0000673
so part of: FGD3
location: join(1934941..1935088,1990709..1990879,1999711..1999879,2000981..2001578,2009899..2009988,2011179..2011315,2012456..2012612,2014343..2014481,2015275..2015333,2017440..2017586,2018074..2018166,2018645..2018724,2019150..2019180,2019442..2019543,2023804..2023863,2030369..2030491,2031887..2032039,2034409..2034549,2041649..2041873)
location: region:1934941-2041873:1
so has part: feature:1934941-1935088:1:exon
so has part: feature:1990709-1990879:1:exon
so has part: feature:1999711-1999879:1:exon
so has part: feature:2000981-2001578:1:exon
so has part: feature:2009899-2009988:1:exon
so has part: feature:2011179-2011315:1:exon
so has part: feature:2012456-2012612:1:exon
so has part: feature:2014343-2014481:1:exon
so has part: feature:2015275-2015333:1:exon
so has part: feature:2017440-2017586:1:exon
so has part: feature:2018074-2018166:1:exon
so has part: feature:2018645-2018724:1:exon
so has part: feature:2019150-2019180:1:exon
so has part: feature:2019442-2019543:1:exon
so has part: feature:2023804-2023863:1:exon
so has part: feature:2030369-2030491:1:exon
so has part: feature:2031887-2032039:1:exon
so has part: feature:2034409-2034549:1:exon
so has part: feature:2041649-2041873:1:exon

XP_030314460.1
type: Protein
SIO_000068: ncbiprotein

position:1934941:1
position: 1934941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2041873:1
position: 2041873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1934941-1935088:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1990709-1990879:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1999711-1999879:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2000981-2001578:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2009899-2009988:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2011179-2011315:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2012456-2012612:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2014343-2014481:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2015275-2015333:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2017440-2017586:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2018074-2018166:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2018645-2018724:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2019150-2019180:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2019442-2019543:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2023804-2023863:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2030369-2030491:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2031887-2032039:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2034409-2034549:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2041649-2041873:1:exon

FGD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FGD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FYVE, RhoGEF and PH domain-containing protein 3 isoform X2
translation: MQLQWEGEETHPPRSAAAFVTAQPGALPGPTRSSSGSVGERWREQMEPEVPPKPVHLKPGQERIPPAPSRPLPADPKSSRSLAPGEEEIPVSAGVNTLIEKFESIRQPVHILQRNQLNLTLKMEPTLDSSKQPSSCDCDMVASSTSSTNEKSEADEKEPDIPCSGDLSNTDIMKIKELSIGDNKSHEDCGAVTVSKEASGELGSKDSTAELNGNGKIPNRDSGIDSPSCSVAGESFPSEDGAEQKKPSMAGSPGEVEPEKKGTKPSSLEQKRDSMQDEDSDIDEGSSEEQETAEVPKLEYLDVNKCTEPQKLFNIANELLHTEEAYVKRLHLLDQVFCTKLSEAGISSEVVTGIFSNISSIYCFHGQFLLPELKTRITQEWNINPRLGDILQKLAPFLKMYGEYVKNFDRAMDLVNTCMQRSSAFKDVVQNIQKQEVCGNLTLQHHMLEPVQRIPRYELLLKDYLKKLPEESPDRKDAEKSLELISTAANHSNAAIRKMEKMHKLLEVYERLGGEEDIVNPANELIKEGHIQKLSAKNGTAQDRYLFLFNSMVLYCVPKLRLIGQKFSVREKMDIAGLQVQEIAKQNVAHTFSITGKKRSLELQARTEEEKREWIQVIQATIEKHKQNSETFRAFNSSFSQEEEHLPDSSIASTSSVESMPGADGGVFGGSDSCRKSSKSKRDKEKQACKSCSESFNSITKRRHHCKQCGAVICAKCSEFKPLADNSRHNRVCKECFLQLPASPCSPGVETVGEQKKRSAAEKQSIFAVENSVFSSYLQFLEKGKTWYKMWVTIPKTEPLVLYLQGSSQDVRSPRPIPLPGYEVSFPGSGEKFEAKHVFKLCQSQQTLYFSAEDEELQIKWMEILTKAAKGETEDAAEGLSNP
SIO_010081: FGD3
subclass of: SO_0000673
so part of: FGD3
location: join(1934941..1935088,1999711..1999879,2000981..2001578,2009899..2009988,2011179..2011315,2012456..2012612,2014343..2014481,2015275..2015333,2017440..2017586,2018074..2018166,2018645..2018724,2019150..2019180,2019442..2019543,2023804..2023863,2030369..2030491,2031887..2032039,2034409..2034549,2041649..2041873)
location: region:1934941-2041873:1
so has part: feature:1934941-1935088:1:exon
so has part: feature:1999711-1999879:1:exon
so has part: feature:2000981-2001578:1:exon
so has part: feature:2009899-2009988:1:exon
so has part: feature:2011179-2011315:1:exon
so has part: feature:2012456-2012612:1:exon
so has part: feature:2014343-2014481:1:exon
so has part: feature:2015275-2015333:1:exon
so has part: feature:2017440-2017586:1:exon
so has part: feature:2018074-2018166:1:exon
so has part: feature:2018645-2018724:1:exon
so has part: feature:2019150-2019180:1:exon
so has part: feature:2019442-2019543:1:exon
so has part: feature:2023804-2023863:1:exon
so has part: feature:2030369-2030491:1:exon
so has part: feature:2031887-2032039:1:exon
so has part: feature:2034409-2034549:1:exon
so has part: feature:2041649-2041873:1:exon

XP_030314461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1934941-1935088:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1999711-1999879:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2000981-2001578:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2009899-2009988:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2011179-2011315:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2012456-2012612:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2014343-2014481:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2015275-2015333:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2017440-2017586:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2018074-2018166:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2018645-2018724:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2019150-2019180:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2019442-2019543:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2023804-2023863:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2030369-2030491:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2031887-2032039:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2034409-2034549:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2041649-2041873:1:exon

SUSD3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SUSD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2077163..2111202
location: region:2077163-2111202:1
so has part: feature:2077163-2111202:1:exon
subclass of: SO_0000010

103539882
type: Gene
SIO_000068: ncbigene

position:2077163:1
position: 2077163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2111202:1
position: 2111202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2077163-2111202:1:exon

SUSD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SUSD3
product: sushi domain containing 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030458520.1
SIO_010081: SUSD3
subclass of: SO_0000673
so part of: SUSD3
location: join(2077163..2077287,2097256..2097444,2098803..2098950,2101383..2101547,2110871..2111202)
location: region:2077163-2111202:1
so has part: feature:2077163-2077287:1:exon
so has part: feature:2097256-2097444:1:exon
so has part: feature:2098803-2098950:1:exon
so has part: feature:2101383-2101547:1:exon
so has part: feature:2110871-2111202:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2077163-2077287:1:exon

position:2077287:1
position: 2077287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2097256-2097444:1:exon

position:2097256:1
position: 2097256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2097444:1
position: 2097444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2098803-2098950:1:exon

position:2098803:1
position: 2098803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2098950:1
position: 2098950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2101383-2101547:1:exon

position:2101383:1
position: 2101383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2101547:1
position: 2101547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2110871-2111202:1:exon

position:2110871:1
position: 2110871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SUSD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SUSD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sushi domain-containing protein 3 isoform X1
translation: MPAATAPGLDVPRTAAPGRDSGSPRGYTGQCSRVSPPQLGTLHIIHGNGTALGTVITFQCPAEHQLEGAGIISCIWEGNNTHWTAGIPSCKPISKYETFGFKVAVIASIVSCAIILLMSMAFLTCCLIKCVKKSERRRTQREMQLWYQLRTEELEHMQAAYFAVKGRNNNNNQKLRNKPVFADVTKVAYDNQGFYRFQEEWTRGTRAPECCKDEEHLPGLSRSSGVPVKLGVLGHSTGAPTVSAIHVVEVYGHKDGCNRPSCQIPA
SIO_010081: SUSD3
subclass of: SO_0000673
so part of: SUSD3
location: join(2077203..2077287,2097256..2097444,2098803..2098950,2101383..2101547,2110871..2111084)
location: region:2077203-2111084:1
so has part: feature:2077203-2077287:1:exon
so has part: feature:2097256-2097444:1:exon
so has part: feature:2098803-2098950:1:exon
so has part: feature:2101383-2101547:1:exon
so has part: feature:2110871-2111084:1:exon

XP_030314380.1
type: Protein
SIO_000068: ncbiprotein

position:2077203:1
position: 2077203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2111084:1
position: 2111084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2077203-2077287:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2097256-2097444:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2098803-2098950:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2101383-2101547:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2110871-2111084:1:exon

SUSD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SUSD3
product: sushi domain containing 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030458521.1
SIO_010081: SUSD3
subclass of: SO_0000673
so part of: SUSD3
location: join(2084414..2084448,2097256..2097444,2098803..2098950,2101383..2101547,2110871..2111202)
location: region:2084414-2111202:1
so has part: feature:2084414-2084448:1:exon
so has part: feature:2097256-2097444:1:exon
so has part: feature:2098803-2098950:1:exon
so has part: feature:2101383-2101547:1:exon
so has part: feature:2110871-2111202:1:exon

position:2084414:1
position: 2084414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2084414-2084448:1:exon

position:2084448:1
position: 2084448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2097256-2097444:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2098803-2098950:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2101383-2101547:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2110871-2111202:1:exon

SUSD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SUSD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sushi domain-containing protein 3 isoform X2
translation: MSPGCSGQCSRVSPPQLGTLHIIHGNGTALGTVITFQCPAEHQLEGAGIISCIWEGNNTHWTAGIPSCKPISKYETFGFKVAVIASIVSCAIILLMSMAFLTCCLIKCVKKSERRRTQREMQLWYQLRTEELEHMQAAYFAVKGRNNNNNQKLRNKPVFADVTKVAYDNQGFYRFQEEWTRGTRAPECCKDEEHLPGLSRSSGVPVKLGVLGHSTGAPTVSAIHVVEVYGHKDGCNRPSCQIPA
SIO_010081: SUSD3
subclass of: SO_0000673
so part of: SUSD3
location: join(2084430..2084448,2097256..2097444,2098803..2098950,2101383..2101547,2110871..2111084)
location: region:2084430-2111084:1
so has part: feature:2084430-2084448:1:exon
so has part: feature:2097256-2097444:1:exon
so has part: feature:2098803-2098950:1:exon
so has part: feature:2101383-2101547:1:exon
so has part: feature:2110871-2111084:1:exon

XP_030314381.1
type: Protein
SIO_000068: ncbiprotein

position:2084430:1
position: 2084430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2084430-2084448:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2097256-2097444:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2098803-2098950:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2101383-2101547:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2110871-2111084:1:exon

CARD19
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: CARD19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2117487..2142261
location: region:2117487-2142261:1
so has part: feature:2117487-2142261:1:exon
subclass of: SO_0000010

103539872
type: Gene
SIO_000068: ncbigene

position:2117487:1
position: 2117487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2142261:1
position: 2142261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2117487-2142261:1:exon

CARD19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CARD19
product: caspase recruitment domain family member 19, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030458246.1
SIO_010081: CARD19
subclass of: SO_0000673
so part of: CARD19
location: join(2117487..2117618,2128036..2128178,2130459..2130612,2134733..2134792,2136411..2136482,2138028..2142261)
location: region:2117487-2142261:1
so has part: feature:2117487-2117618:1:exon
so has part: feature:2128036-2128178:1:exon
so has part: feature:2130459-2130612:1:exon
so has part: feature:2134733-2134792:1:exon
so has part: feature:2136411-2136482:1:exon
so has part: feature:2138028-2142261:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2117487-2117618:1:exon

position:2117618:1
position: 2117618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2128036-2128178:1:exon

position:2128036:1
position: 2128036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2128178:1
position: 2128178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2130459-2130612:1:exon

position:2130459:1
position: 2130459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2130612:1
position: 2130612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2134733-2134792:1:exon

position:2134733:1
position: 2134733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2134792:1
position: 2134792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2136411-2136482:1:exon

position:2136411:1
position: 2136411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2136482:1
position: 2136482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2138028-2142261:1:exon

position:2138028:1
position: 2138028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CARD19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CARD19
product: caspase recruitment domain family member 19, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_030458249.1
SIO_010081: CARD19
subclass of: SO_0000673
so part of: CARD19
location: join(2117487..2117618,2128036..2128178,2130459..2130612,2136411..2136482,2138028..2142261)
location: region:2117487-2142261:1
so has part: feature:2117487-2117618:1:exon
so has part: feature:2128036-2128178:1:exon
so has part: feature:2130459-2130612:1:exon
so has part: feature:2136411-2136482:1:exon
so has part: feature:2138028-2142261:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2117487-2117618:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2128036-2128178:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2130459-2130612:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2136411-2136482:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2138028-2142261:1:exon

CARD19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CARD19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caspase recruitment domain-containing protein 19 isoform X1
translation: MLYRTYQSYCHRLQHDIYFLTSNSRLNEQVVDKIILQLNRVYPQILTNAEAEKFRNPKASLHTRLSELLKHLQKKGDRHCQEFYRALQINAEQLYNDLPSRKILKTTDSTEIDTYKEKYMLNDRGPVFFLACFSVAAGFALFWYCYSSDTKVIGRARRILGFSPIIIGRHVRNICMLYLEDISRD
SIO_010081: CARD19
subclass of: SO_0000673
so part of: CARD19
location: join(2117603..2117618,2128036..2128178,2130459..2130612,2134733..2134792,2136411..2136482,2138028..2138140)
location: region:2117603-2138140:1
so has part: feature:2117603-2117618:1:exon
so has part: feature:2128036-2128178:1:exon
so has part: feature:2130459-2130612:1:exon
so has part: feature:2134733-2134792:1:exon
so has part: feature:2136411-2136482:1:exon
so has part: feature:2138028-2138140:1:exon

XP_030314106.1
type: Protein
SIO_000068: ncbiprotein

position:2117603:1
position: 2117603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2138140:1
position: 2138140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2117603-2117618:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2128036-2128178:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2130459-2130612:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2134733-2134792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2136411-2136482:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2138028-2138140:1:exon

CARD19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CARD19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caspase recruitment domain-containing protein 19 isoform X3
translation: MLYRTYQSYCHRLQHDIYFLTSNSRLNEQVVDKIILQLNRVYPQILTNAEAEKFRNPKASLHTRLSELLKHLQKKGDRHCQEFYRALQINAEQLYNDLPSRKILSPVFFLACFSVAAGFALFWYCYSSDTKVIGRARRILGFSPIIIGRHVRNICMLYLEDISRD
SIO_010081: CARD19
subclass of: SO_0000673
so part of: CARD19
location: join(2117603..2117618,2128036..2128178,2130459..2130612,2136411..2136482,2138028..2138140)
location: region:2117603-2138140:1
so has part: feature:2117603-2117618:1:exon
so has part: feature:2128036-2128178:1:exon
so has part: feature:2130459-2130612:1:exon
so has part: feature:2136411-2136482:1:exon
so has part: feature:2138028-2138140:1:exon

XP_030314109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2117603-2117618:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2128036-2128178:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2130459-2130612:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2136411-2136482:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2138028-2138140:1:exon

CARD19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CARD19
product: caspase recruitment domain family member 19, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030458248.1
SIO_010081: CARD19
subclass of: SO_0000673
so part of: CARD19
location: join(2121466..2121546,2128036..2128178,2130459..2130612,2134733..2134792,2136411..2136482,2138028..2142261)
location: region:2121466-2142261:1
so has part: feature:2121466-2121546:1:exon
so has part: feature:2128036-2128178:1:exon
so has part: feature:2130459-2130612:1:exon
so has part: feature:2134733-2134792:1:exon
so has part: feature:2136411-2136482:1:exon
so has part: feature:2138028-2142261:1:exon

position:2121466:1
position: 2121466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2121466-2121546:1:exon

position:2121546:1
position: 2121546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2128036-2128178:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2130459-2130612:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2134733-2134792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2136411-2136482:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2138028-2142261:1:exon

CARD19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CARD19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caspase recruitment domain-containing protein 19 isoform X2
translation: MADQSYCHRLQHDIYFLTSNSRLNEQVVDKIILQLNRVYPQILTNAEAEKFRNPKASLHTRLSELLKHLQKKGDRHCQEFYRALQINAEQLYNDLPSRKILKTTDSTEIDTYKEKYMLNDRGPVFFLACFSVAAGFALFWYCYSSDTKVIGRARRILGFSPIIIGRHVRNICMLYLEDISRD
SIO_010081: CARD19
subclass of: SO_0000673
so part of: CARD19
location: join(2121540..2121546,2128036..2128178,2130459..2130612,2134733..2134792,2136411..2136482,2138028..2138140)
location: region:2121540-2138140:1
so has part: feature:2121540-2121546:1:exon
so has part: feature:2128036-2128178:1:exon
so has part: feature:2130459-2130612:1:exon
so has part: feature:2134733-2134792:1:exon
so has part: feature:2136411-2136482:1:exon
so has part: feature:2138028-2138140:1:exon

XP_030314108.1
type: Protein
SIO_000068: ncbiprotein

position:2121540:1
position: 2121540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2121540-2121546:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2128036-2128178:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2130459-2130612:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2134733-2134792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2136411-2136482:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2138028-2138140:1:exon

NINJ1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: NINJ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2151106..2169446)
location: region:2151106-2169446:-1
so has part: feature:2151106-2169446:-1:exon
subclass of: SO_0000010

103539862
type: Gene
SIO_000068: ncbigene

position:2151106:-1
position: 2151106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2169446:-1
position: 2169446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2151106-2169446:-1:exon

NINJ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NINJ1
product: ninjurin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030458436.1
SIO_010081: NINJ1
subclass of: SO_0000673
so part of: NINJ1
location: complement(join(2151106..2151867,2154096..2154257,2158870..2159104,2169294..2169446))
location: region:2151106-2169446:-1
so has part: feature:2169294-2169446:-1:exon
so has part: feature:2158870-2159104:-1:exon
so has part: feature:2154096-2154257:-1:exon
so has part: feature:2151106-2151867:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2169294-2169446:-1:exon

position:2169294:-1
position: 2169294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2158870-2159104:-1:exon

position:2158870:-1
position: 2158870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2159104:-1
position: 2159104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2154096-2154257:-1:exon

position:2154096:-1
position: 2154096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2154257:-1
position: 2154257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2151106-2151867:-1:exon

position:2151867:-1
position: 2151867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NINJ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NINJ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ninjurin-1
translation: MDSGSETHELNGTAEGAEPPALERHRRSQWFQRNGPININHYANKKSAAESMLDIALLMANASQLKAVMEQGPSFSFYIPLIILISLSLMLQVIVGVLLIFLVKYDLNNPAKHGKLDFLNNLATGLVFIIVVVNIFITAFGVQKPGAEPASRQ
SIO_010081: NINJ1
subclass of: SO_0000673
so part of: NINJ1
location: complement(join(2154103..2154257,2158870..2159104,2169294..2169365))
location: region:2154103-2169365:-1
so has part: feature:2169294-2169365:-1:exon
so has part: feature:2158870-2159104:-1:exon
so has part: feature:2154103-2154257:-1:exon

XP_030314296.1
type: Protein
SIO_000068: ncbiprotein

position:2154103:-1
position: 2154103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2169365:-1
position: 2169365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2169294-2169365:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2158870-2159104:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2154103-2154257:-1:exon

WNK2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: WNK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2221637..2333155
location: region:2221637-2333155:1
so has part: feature:2221637-2333155:1:exon
subclass of: SO_0000010

103539851
type: Gene
SIO_000068: ncbigene

position:2221637:1
position: 2221637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2333155:1
position: 2333155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2221637-2333155:1:exon

WNK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: WNK2
product: WNK lysine deficient protein kinase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 13 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030458638.1
SIO_010081: WNK2
subclass of: SO_0000673
so part of: WNK2
location: join(2221637..2222380,2259038..2259210,2260183..2260403,2263822..2263979,2273360..2273448,2274254..2274473,2277373..2277661,2282075..2282271,2284832..2284978,2288332..2288523,2289518..2290072,2292366..2292680,2295444..2295493,2298207..2298372,2298453..2298569,2298732..2298899,2299109..2299154,2300016..2300132,2300605..2301695,2303118..2303169,2304618..2304673,2304751..2305427,2306607..2306821,2308733..2308948,2309833..2309931,2315138..2315182,2316698..2316951,2332985..2333155)
location: region:2221637-2333155:1
so has part: feature:2221637-2222380:1:exon
so has part: feature:2259038-2259210:1:exon
so has part: feature:2260183-2260403:1:exon
so has part: feature:2263822-2263979:1:exon
so has part: feature:2273360-2273448:1:exon
so has part: feature:2274254-2274473:1:exon
so has part: feature:2277373-2277661:1:exon
so has part: feature:2282075-2282271:1:exon
so has part: feature:2284832-2284978:1:exon
so has part: feature:2288332-2288523:1:exon
so has part: feature:2289518-2290072:1:exon
so has part: feature:2292366-2292680:1:exon
so has part: feature:2295444-2295493:1:exon
so has part: feature:2298207-2298372:1:exon
so has part: feature:2298453-2298569:1:exon
so has part: feature:2298732-2298899:1:exon
so has part: feature:2299109-2299154:1:exon
so has part: feature:2300016-2300132:1:exon
so has part: feature:2300605-2301695:1:exon
so has part: feature:2303118-2303169:1:exon
so has part: feature:2304618-2304673:1:exon
so has part: feature:2304751-2305427:1:exon
so has part: feature:2306607-2306821:1:exon
so has part: feature:2308733-2308948:1:exon
so has part: feature:2309833-2309931:1:exon
so has part: feature:2315138-2315182:1:exon
so has part: feature:2316698-2316951:1:exon
so has part: feature:2332985-2333155:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2221637-2222380:1:exon

position:2222380:1
position: 2222380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2259038-2259210:1:exon

position:2259038:1
position: 2259038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2259210:1
position: 2259210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2260183-2260403:1:exon

position:2260183:1
position: 2260183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2260403:1
position: 2260403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2263822-2263979:1:exon

position:2263822:1
position: 2263822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2263979:1
position: 2263979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2273360-2273448:1:exon

position:2273360:1
position: 2273360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2273448:1
position: 2273448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2274254-2274473:1:exon

position:2274254:1
position: 2274254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2274473:1
position: 2274473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2277373-2277661:1:exon

position:2277373:1
position: 2277373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2277661:1
position: 2277661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2282075-2282271:1:exon

position:2282075:1
position: 2282075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2282271:1
position: 2282271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2284832-2284978:1:exon

position:2284832:1
position: 2284832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2284978:1
position: 2284978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2288332-2288523:1:exon

position:2288332:1
position: 2288332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2288523:1
position: 2288523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2289518-2290072:1:exon

position:2289518:1
position: 2289518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2290072:1
position: 2290072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2292366-2292680:1:exon

position:2292366:1
position: 2292366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2292680:1
position: 2292680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2295444-2295493:1:exon

position:2295444:1
position: 2295444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2295493:1
position: 2295493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2298207-2298372:1:exon

position:2298207:1
position: 2298207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2298372:1
position: 2298372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2298453-2298569:1:exon

position:2298453:1
position: 2298453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2298569:1
position: 2298569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2298732-2298899:1:exon

position:2298732:1
position: 2298732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2298899:1
position: 2298899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2299109-2299154:1:exon

position:2299109:1
position: 2299109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2299154:1
position: 2299154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2300016-2300132:1:exon

position:2300016:1
position: 2300016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2300132:1
position: 2300132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2300605-2301695:1:exon

position:2300605:1
position: 2300605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2301695:1
position: 2301695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2303118-2303169:1:exon

position:2303118:1
position: 2303118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2303169:1
position: 2303169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2304618-2304673:1:exon

position:2304618:1
position: 2304618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2304673:1
position: 2304673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2304751-2305427:1:exon

position:2304751:1
position: 2304751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2305427:1
position: 2305427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2306607-2306821:1:exon

position:2306607:1
position: 2306607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2306821:1
position: 2306821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2308733-2308948:1:exon

position:2308733:1
position: 2308733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2308948:1
position: 2308948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2309833-2309931:1:exon

position:2309833:1
position: 2309833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2309931:1
position: 2309931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2315138-2315182:1:exon

position:2315138:1
position: 2315138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2315182:1
position: 2315182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2316698-2316951:1:exon

position:2316698:1
position: 2316698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2316951:1
position: 2316951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2332985-2333155:1:exon

position:2332985:1
position: 2332985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WNK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: WNK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase WNK2
translation: METGGDARSAPRRGGRGGGGRGGFPATAEPSAPPAAGTNMNIDGPGGGGRSGAAAAAAAVPGAPGAAAPPLRAPSSRDPKMVHQRFLRRSVVDSDQEEPAFDLPESEHQRKIILLPKTRRIIAERAKAGQGAPEQGSLGAEPAGALTAAPAPGSAAGAEEQREAGKDAERKEASDASKDQSKAKKEEPEEEADMKAVATSLDGRFLKFDIELGRGSFKTVYKGLDTETWVEVAWCELQDRKLTKVERQRFKEEAEMLKGLQHPNIVRFYDFWESCVKGKRCIVLVTELMTSGTLKTYLKRFKVMKPKVLRSWCRQILKGLLFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKSVIGTPEFMAPEMYEEHYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRKVTCGIKPASFEKVTDPEIKEIIGECICKNKEERYEIKDLLSHAFFAEDTGVRVELAEEDHGRKSSIALRLWVEDPKKLKGKPKDNGAIEFTFDLEKETPDDVAQEMIDSGFFHENDLKIVAKSIRDRVALILWRRERIWPRMQSEERRDSECLEKLKTPHTQQVQVTYLSHTGHHVLSESEEPEADQHPYHQNLPTSVTSVASDSTFDSGQGSTVYSDSQSSQQSVIYSSLPEPVPPAAQRVYSPPLTESQALPHSLTQLGHFQQPSAPGLPAAAPAVVAPRPQPFQEPTMSFPVVQPTTVSSLPMGQPQPVLAGQQQQPISQQASLQQVLASQPVCPIQPATHLLPQYQPQTSQVAATSTPLKPLQISTVPQLPPVAPSQIPQFPVIPAITPLAGLDSLPPNLSDIPAANVPPIPAPSQYFAPAVILPSLPMNPTLPLAPNSPALPMQAVNLPHTTVASLVLPCQTIVPNMSAATIPLLAVAPPGVPALPPHHGVPQLSQQQMYQSTFQQIIQSEAPSPHHTQSTQAVSQQQQQQQQQPPPPQSLQPSVIHPPDQALPAPGAAHQQISGHPQYALEAGAQVPVLPVQPSIVMSPPVQLQPELLPPRVTPEGISQVHGSLAAASPPIPIDHSLPLQPSALLQLQPDLSQPLGQQLPAPCSAVPAAAETSQEEQAMQDKLQTLSQSCESYMSQDVTSGKEMSDSFEGAIGSGKQEGKSSKKHKKSTRTRSRQEKSSRPKLTILNVCNTGDKMVECQLETHNHKMVTFKFDLDGDAPEEIATYMVENEFILPSEKETFIEQMKDIIDKAEDMLSEDTEGERSSDQGMSPQQDADRLEVSEEKRQSHMKAPVYQQNVLHTGKRWFIICPVVENPTTDAPEFSPPVPQSAQQLEGPDPEQPDDQQASSAIMDPPGGSAAQQLPLQAGVSDSSLGASPAPAQVPAAASSTGLPSQVDFPAPALLGSAPNPPEQAAANGAQPECPPLPPGMVAQPPGMVAQPLGVPAAHTATLEEPSEAAPAPLPRQPQADEGTCVPDVELACCSVGPHVVVPAAPVVAPEPCPLPVLPDAVVLERQPAAQASQLPEAAQPGLLQQHPFLSQTFPPADPLGMAGSQLQSPTQVPVVASQQHAMLPQGQPGPCPGVGVGLLQPSTAESDGEGPPRVDFVDNTIKSLDEKLRNLLYQEYVPTSSASAGTPEAPVPSEQGDSEFNLPPFPEDGVSTSEVREPGHSVADTSQETKAAAEAPSVPLLPSKTSPYPVLSEVTQSSEARGGSTSRKGSTASVASTPAASTKGLLQVAPTSSSLTQQMEVSKRSEKATASSAQDNVTHTSTADGVINNLQRDDSLDSGSCGKQAETHDSSTPAKTIGRFSVISTQDELTLTAPHCLRFSAPPDVYLDALPSSPDLQTAVRRVQTASSVDILCDQASSDSAEEPFHRQPAAAAQLSPPSSSAATDLIKKAAAFLQRSSKAGSPGPESPNGQGTKIPTINITSFHSQSSYMSSDNDSEFEDADMRKELQSLREKHMKEIAELQTQQKNEIEALYIRLGKPLPPNLGFLHSAPPSGRRRRTSKNKLKGGKLLNPLVQQ…
SIO_010081: WNK2
subclass of: SO_0000673
so part of: WNK2
location: join(2221667..2222380,2259038..2259210,2260183..2260403,2263822..2263979,2273360..2273448,2274254..2274473,2277373..2277661,2282075..2282271,2284832..2284978,2288332..2288523,2289518..2290072,2292366..2292680,2295444..2295493,2298207..2298372,2298453..2298569,2298732..2298899,2299109..2299154,2300016..2300132,2300605..2301695,2303118..2303169,2304618..2304673,2304751..2305427,2306607..2306821,2308733..2308948,2309833..2309931,2315138..2315182,2316698..2316951,2332985..2333092)
location: region:2221667-2333092:1
so has part: feature:2221667-2222380:1:exon
so has part: feature:2259038-2259210:1:exon
so has part: feature:2260183-2260403:1:exon
so has part: feature:2263822-2263979:1:exon
so has part: feature:2273360-2273448:1:exon
so has part: feature:2274254-2274473:1:exon
so has part: feature:2277373-2277661:1:exon
so has part: feature:2282075-2282271:1:exon
so has part: feature:2284832-2284978:1:exon
so has part: feature:2288332-2288523:1:exon
so has part: feature:2289518-2290072:1:exon
so has part: feature:2292366-2292680:1:exon
so has part: feature:2295444-2295493:1:exon
so has part: feature:2298207-2298372:1:exon
so has part: feature:2298453-2298569:1:exon
so has part: feature:2298732-2298899:1:exon
so has part: feature:2299109-2299154:1:exon
so has part: feature:2300016-2300132:1:exon
so has part: feature:2300605-2301695:1:exon
so has part: feature:2303118-2303169:1:exon
so has part: feature:2304618-2304673:1:exon
so has part: feature:2304751-2305427:1:exon
so has part: feature:2306607-2306821:1:exon
so has part: feature:2308733-2308948:1:exon
so has part: feature:2309833-2309931:1:exon
so has part: feature:2315138-2315182:1:exon
so has part: feature:2316698-2316951:1:exon
so has part: feature:2332985-2333092:1:exon

XP_030314498.1
type: Protein
SIO_000068: ncbiprotein

position:2221667:1
position: 2221667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2333092:1
position: 2333092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2221667-2222380:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2259038-2259210:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2260183-2260403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2263822-2263979:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2273360-2273448:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2274254-2274473:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2277373-2277661:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2282075-2282271:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2284832-2284978:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2288332-2288523:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2289518-2290072:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2292366-2292680:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2295444-2295493:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2298207-2298372:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2298453-2298569:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2298732-2298899:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2299109-2299154:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2300016-2300132:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2300605-2301695:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2303118-2303169:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2304618-2304673:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2304751-2305427:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2306607-2306821:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2308733-2308948:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2309833-2309931:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2315138-2315182:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2316698-2316951:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2332985-2333092:1:exon

LOC115599030
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599030
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2351351..2362109)
location: region:2351351-2362109:-1
so has part: feature:2351351-2362109:-1:exon
subclass of: SO_0000011

115599030
type: Gene
SIO_000068: ncbigene

position:2351351:-1
position: 2351351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2362109:-1
position: 2362109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2351351-2362109:-1:exon

LOC115599030
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599030
product: uncharacterized LOC115599030
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988093.1
SIO_010081: LOC115599030
subclass of: SO_0000673
so part of: LOC115599030
location: complement(join(2351351..2351424,2351691..2351782,2352684..2352776,2362039..2362109))
location: region:2351351-2362109:-1
so has part: feature:2362039-2362109:-1:exon
so has part: feature:2352684-2352776:-1:exon
so has part: feature:2351691-2351782:-1:exon
so has part: feature:2351351-2351424:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2362039-2362109:-1:exon

position:2362039:-1
position: 2362039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2352684-2352776:-1:exon

position:2352684:-1
position: 2352684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2352776:-1
position: 2352776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2351691-2351782:-1:exon

position:2351691:-1
position: 2351691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2351782:-1
position: 2351782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2351351-2351424:-1:exon

position:2351424:-1
position: 2351424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FAM120A
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: FAM120A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2371001..2425020
location: region:2371001-2425020:1
so has part: feature:2371001-2425020:1:exon
subclass of: SO_0000010

103539635
type: Gene
SIO_000068: ncbigene

position:2371001:1
position: 2371001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2425020:1
position: 2425020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2371001-2425020:1:exon

FAM120A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FAM120A
product: family with sequence similarity 120A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 66 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_030458767.1
SIO_010081: FAM120A
subclass of: SO_0000673
so part of: FAM120A
location: join(2371001..2371829,2377401..2377647,2381976..2382058,2390880..2391008,2391449..2391545,2392261..2392361,2392636..2392919,2394220..2394307,2397788..2398012,2401288..2401462,2407008..2407257,2408504..2408618,2412251..2412460,2413514..2413697,2414653..2414790,2416235..2416376,2420257..2420353,2423046..2425020)
location: region:2371001-2425020:1
so has part: feature:2371001-2371829:1:exon
so has part: feature:2377401-2377647:1:exon
so has part: feature:2381976-2382058:1:exon
so has part: feature:2390880-2391008:1:exon
so has part: feature:2391449-2391545:1:exon
so has part: feature:2392261-2392361:1:exon
so has part: feature:2392636-2392919:1:exon
so has part: feature:2394220-2394307:1:exon
so has part: feature:2397788-2398012:1:exon
so has part: feature:2401288-2401462:1:exon
so has part: feature:2407008-2407257:1:exon
so has part: feature:2408504-2408618:1:exon
so has part: feature:2412251-2412460:1:exon
so has part: feature:2413514-2413697:1:exon
so has part: feature:2414653-2414790:1:exon
so has part: feature:2416235-2416376:1:exon
so has part: feature:2420257-2420353:1:exon
so has part: feature:2423046-2425020:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2371001-2371829:1:exon

position:2371829:1
position: 2371829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2377401-2377647:1:exon

position:2377401:1
position: 2377401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2377647:1
position: 2377647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2381976-2382058:1:exon

position:2381976:1
position: 2381976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2382058:1
position: 2382058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2390880-2391008:1:exon

position:2390880:1
position: 2390880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2391008:1
position: 2391008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2391449-2391545:1:exon

position:2391449:1
position: 2391449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2391545:1
position: 2391545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2392261-2392361:1:exon

position:2392261:1
position: 2392261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2392361:1
position: 2392361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2392636-2392919:1:exon

position:2392636:1
position: 2392636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2392919:1
position: 2392919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2394220-2394307:1:exon

position:2394220:1
position: 2394220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2394307:1
position: 2394307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2397788-2398012:1:exon

position:2397788:1
position: 2397788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2398012:1
position: 2398012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2401288-2401462:1:exon

position:2401288:1
position: 2401288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2401462:1
position: 2401462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2407008-2407257:1:exon

position:2407008:1
position: 2407008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2407257:1
position: 2407257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2408504-2408618:1:exon

position:2408504:1
position: 2408504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2408618:1
position: 2408618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2412251-2412460:1:exon

position:2412251:1
position: 2412251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2412460:1
position: 2412460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2413514-2413697:1:exon

position:2413514:1
position: 2413514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2413697:1
position: 2413697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2414653-2414790:1:exon

position:2414653:1
position: 2414653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2414790:1
position: 2414790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2416235-2416376:1:exon

position:2416235:1
position: 2416235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2416376:1
position: 2416376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2420257-2420353:1:exon

position:2420257:1
position: 2420257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2420353:1
position: 2420353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2423046-2425020:1:exon

position:2423046:1
position: 2423046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FAM120A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FAM120A
product: family with sequence similarity 120A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 64 ESTs, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030458768.1
SIO_010081: FAM120A
subclass of: SO_0000673
so part of: FAM120A
location: join(2371001..2371829,2377401..2377647,2381976..2382058,2390880..2391008,2391449..2391545,2392261..2392361,2392636..2392919,2394220..2394307,2397788..2398012,2401288..2401462,2407008..2407257,2408504..2408618,2412251..2412460,2413514..2413697,2416235..2416376,2420257..2420353,2423046..2425020)
location: region:2371001-2425020:1
so has part: feature:2371001-2371829:1:exon
so has part: feature:2377401-2377647:1:exon
so has part: feature:2381976-2382058:1:exon
so has part: feature:2390880-2391008:1:exon
so has part: feature:2391449-2391545:1:exon
so has part: feature:2392261-2392361:1:exon
so has part: feature:2392636-2392919:1:exon
so has part: feature:2394220-2394307:1:exon
so has part: feature:2397788-2398012:1:exon
so has part: feature:2401288-2401462:1:exon
so has part: feature:2407008-2407257:1:exon
so has part: feature:2408504-2408618:1:exon
so has part: feature:2412251-2412460:1:exon
so has part: feature:2413514-2413697:1:exon
so has part: feature:2416235-2416376:1:exon
so has part: feature:2420257-2420353:1:exon
so has part: feature:2423046-2425020:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2371001-2371829:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2377401-2377647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2381976-2382058:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2390880-2391008:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2391449-2391545:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2392261-2392361:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2392636-2392919:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2394220-2394307:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2397788-2398012:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2401288-2401462:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2407008-2407257:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2408504-2408618:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2412251-2412460:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2413514-2413697:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2416235-2416376:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2420257-2420353:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2423046-2425020:1:exon

FAM120A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FAM120A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: constitutive coactivator of PPAR-gamma-like protein 1 isoform X1
translation: MGVQGFQDYIEKHCPSAVVPVELQKLARGSLVGGGRQRPPQTPLRLLIDADNCLHRLYGGFYTDWVSGGQWNHMLGYLAALAKACFNGNIELFVFFNGALEKARLHEWVKRQGNERQTAQQIVSHVQNKGTPPPKVWFLPPVCMAHCIRLALIRFHIKVAQSIEDHHQEVIAFCREKGFHGLVAYDSDYALCNIPYYFSAHALKLSRNGKSLTTSQYLMHEVAKQLDLNPNRFPIFAALLGNHILPDEDLASFHWSLLGPEHPLASLKVRAHQLVLPPCDVVIKAVADYVRNIQDTTDLDAIAKDVFQHSQSRTDDKVTRFKRAVAYYSATNKPMPFHPPHYLAARPNQFGMPGIVPPYVPSQMLNIPQTSLQAKPVAQQMSNQGGAQGQGPYPYSLSEPAITLETGGKSLSEQNNYSNIPHEGKHTPLYERSSPINPAQSGSPNHVDSTYFPASSTSSSSDNDEGNGGAVNHVSGNKIGWEKTGSQSESQTRGDLGDQTKVEGSSSASSGSQAAEVKGNQTSNPQIPCLLSMPTRNHMDITTPPLPPVAPEVLRVAEHRHKKGLMYPYIFHVLTKGEIKIAVSIEDEANKDLPPAALLYRPVRQYVYGVLFSLAESRKKTERLAFRKNRLPPEFSPVIIKEWAAYKGKSPQTPELVEALAFREWTCPNLKKLWLGKAVEDKNRRMRAFLACMRSDTPAMLNPTNVPTHLMVLCCVLRYMVQWPGVRILRRQELDAFLAQALSPKLYEPDQLQELKIENLDPRGIQLSALFMSGVDMALFANDACGQPIPWEHCCPWMYFDGKLFQTKLIKASREKVPLIDLCDGQAEQAAKVEKMRQSILEGLNFSRQNHPLPFPPPPAMPFYPASMYPRHFGPVPPPQGRGRGFAGVYGFGGPYGETVATGAYRAFRVAAAAGHSGAFSGNDSNRTSKFQGGVQPIPSQGGKLEIAGTVVGHWAGSRRGRGGRGPFPLQVVSVGGPARGRPRGVISTPVIRTFGRGGRYYGRGYKSQGAIQGKPPYAASAEEVAKELKSKSEESKSSIVSSDGSLAENGVVNEEKPASQMNGNTGDIRASNQSESALSNDSKMCNTNPHLNALNADSVCHKDDTLEATVLKKEE
SIO_010081: FAM120A
subclass of: SO_0000673
so part of: FAM120A
location: join(2371356..2371829,2377401..2377647,2381976..2382058,2390880..2391008,2391449..2391545,2392261..2392361,2392636..2392919,2394220..2394307,2397788..2398012,2401288..2401462,2407008..2407257,2408504..2408618,2412251..2412460,2413514..2413697,2414653..2414790,2416235..2416376,2420257..2420353,2423046..2423357)
location: region:2371356-2423357:1
so has part: feature:2371356-2371829:1:exon
so has part: feature:2377401-2377647:1:exon
so has part: feature:2381976-2382058:1:exon
so has part: feature:2390880-2391008:1:exon
so has part: feature:2391449-2391545:1:exon
so has part: feature:2392261-2392361:1:exon
so has part: feature:2392636-2392919:1:exon
so has part: feature:2394220-2394307:1:exon
so has part: feature:2397788-2398012:1:exon
so has part: feature:2401288-2401462:1:exon
so has part: feature:2407008-2407257:1:exon
so has part: feature:2408504-2408618:1:exon
so has part: feature:2412251-2412460:1:exon
so has part: feature:2413514-2413697:1:exon
so has part: feature:2414653-2414790:1:exon
so has part: feature:2416235-2416376:1:exon
so has part: feature:2420257-2420353:1:exon
so has part: feature:2423046-2423357:1:exon

XP_030314627.1
type: Protein
SIO_000068: ncbiprotein

position:2371356:1
position: 2371356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2423357:1
position: 2423357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2371356-2371829:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2377401-2377647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2381976-2382058:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2390880-2391008:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2391449-2391545:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2392261-2392361:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2392636-2392919:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2394220-2394307:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2397788-2398012:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2401288-2401462:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2407008-2407257:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2408504-2408618:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2412251-2412460:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2413514-2413697:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2414653-2414790:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2416235-2416376:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2420257-2420353:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2423046-2423357:1:exon

FAM120A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FAM120A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: constitutive coactivator of PPAR-gamma-like protein 1 isoform X2
translation: MGVQGFQDYIEKHCPSAVVPVELQKLARGSLVGGGRQRPPQTPLRLLIDADNCLHRLYGGFYTDWVSGGQWNHMLGYLAALAKACFNGNIELFVFFNGALEKARLHEWVKRQGNERQTAQQIVSHVQNKGTPPPKVWFLPPVCMAHCIRLALIRFHIKVAQSIEDHHQEVIAFCREKGFHGLVAYDSDYALCNIPYYFSAHALKLSRNGKSLTTSQYLMHEVAKQLDLNPNRFPIFAALLGNHILPDEDLASFHWSLLGPEHPLASLKVRAHQLVLPPCDVVIKAVADYVRNIQDTTDLDAIAKDVFQHSQSRTDDKVTRFKRAVAYYSATNKPMPFHPPHYLAARPNQFGMPGIVPPYVPSQMLNIPQTSLQAKPVAQQMSNQGGAQGQGPYPYSLSEPAITLETGGKSLSEQNNYSNIPHEGKHTPLYERSSPINPAQSGSPNHVDSTYFPASSTSSSSDNDEGNGGAVNHVSGNKIGWEKTGSQSESQTRGDLGDQTKVEGSSSASSGSQAAEVKGNQTSNPQIPCLLSMPTRNHMDITTPPLPPVAPEVLRVAEHRHKKGLMYPYIFHVLTKGEIKIAVSIEDEANKDLPPAALLYRPVRQYVYGVLFSLAESRKKTERLAFRKNRLPPEFSPVIIKEWAAYKGKSPQTPELVEALAFREWTCPNLKKLWLGKAVEDKNRRMRAFLACMRSDTPAMLNPTNVPTHLMVLCCVLRYMVQWPGVRILRRQELDAFLAQALSPKLYEPDQLQELKIENLDPRGIQLSALFMSGVDMALFANDACGQPIPWEHCCPWMYFDGKLFQTKLIKASREKVPLIDLCDGQAEQAAKVEKMRQSILEGLNFSRQNHPLPFPPPPAMPFYPASMYPRHFGPVPPPQGRGRGFAGVQPIPSQGGKLEIAGTVVGHWAGSRRGRGGRGPFPLQVVSVGGPARGRPRGVISTPVIRTFGRGGRYYGRGYKSQGAIQGKPPYAASAEEVAKELKSKSEESKSSIVSSDGSLAENGVVNEEKPASQMNGNTGDIRASNQSESALSNDSKMCNTNPHLNALNADSVCHKDDTLEATVLKKEE
SIO_010081: FAM120A
subclass of: SO_0000673
so part of: FAM120A
location: join(2371356..2371829,2377401..2377647,2381976..2382058,2390880..2391008,2391449..2391545,2392261..2392361,2392636..2392919,2394220..2394307,2397788..2398012,2401288..2401462,2407008..2407257,2408504..2408618,2412251..2412460,2413514..2413697,2416235..2416376,2420257..2420353,2423046..2423357)
location: region:2371356-2423357:1
so has part: feature:2371356-2371829:1:exon
so has part: feature:2377401-2377647:1:exon
so has part: feature:2381976-2382058:1:exon
so has part: feature:2390880-2391008:1:exon
so has part: feature:2391449-2391545:1:exon
so has part: feature:2392261-2392361:1:exon
so has part: feature:2392636-2392919:1:exon
so has part: feature:2394220-2394307:1:exon
so has part: feature:2397788-2398012:1:exon
so has part: feature:2401288-2401462:1:exon
so has part: feature:2407008-2407257:1:exon
so has part: feature:2408504-2408618:1:exon
so has part: feature:2412251-2412460:1:exon
so has part: feature:2413514-2413697:1:exon
so has part: feature:2416235-2416376:1:exon
so has part: feature:2420257-2420353:1:exon
so has part: feature:2423046-2423357:1:exon

XP_030314628.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2371356-2371829:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2377401-2377647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2381976-2382058:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2390880-2391008:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2391449-2391545:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2392261-2392361:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2392636-2392919:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2394220-2394307:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2397788-2398012:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2401288-2401462:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2407008-2407257:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2408504-2408618:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2412251-2412460:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2413514-2413697:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2416235-2416376:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2420257-2420353:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2423046-2423357:1:exon

FAM120A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FAM120A
product: family with sequence similarity 120A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 62 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030458769.1
SIO_010081: FAM120A
subclass of: SO_0000673
so part of: FAM120A
location: join(2372289..2372349,2377401..2377647,2381976..2382058,2390880..2391008,2391449..2391545,2392261..2392361,2392636..2392919,2394220..2394307,2397788..2398012,2401288..2401462,2407008..2407257,2408504..2408618,2412251..2412460,2413514..2413697,2414653..2414790,2416235..2416376,2420257..2420353,2423046..2425020)
location: region:2372289-2425020:1
so has part: feature:2372289-2372349:1:exon
so has part: feature:2377401-2377647:1:exon
so has part: feature:2381976-2382058:1:exon
so has part: feature:2390880-2391008:1:exon
so has part: feature:2391449-2391545:1:exon
so has part: feature:2392261-2392361:1:exon
so has part: feature:2392636-2392919:1:exon
so has part: feature:2394220-2394307:1:exon
so has part: feature:2397788-2398012:1:exon
so has part: feature:2401288-2401462:1:exon
so has part: feature:2407008-2407257:1:exon
so has part: feature:2408504-2408618:1:exon
so has part: feature:2412251-2412460:1:exon
so has part: feature:2413514-2413697:1:exon
so has part: feature:2414653-2414790:1:exon
so has part: feature:2416235-2416376:1:exon
so has part: feature:2420257-2420353:1:exon
so has part: feature:2423046-2425020:1:exon

position:2372289:1
position: 2372289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2372289-2372349:1:exon

position:2372349:1
position: 2372349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2377401-2377647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2381976-2382058:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2390880-2391008:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2391449-2391545:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2392261-2392361:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2392636-2392919:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2394220-2394307:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2397788-2398012:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2401288-2401462:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2407008-2407257:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2408504-2408618:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2412251-2412460:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2413514-2413697:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2414653-2414790:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2416235-2416376:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2420257-2420353:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2423046-2425020:1:exon

FAM120A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FAM120A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: constitutive coactivator of PPAR-gamma-like protein 1 isoform X3
translation: MHEVAKQLDLNPNRFPIFAALLGNHILPDEDLASFHWSLLGPEHPLASLKVRAHQLVLPPCDVVIKAVADYVRNIQDTTDLDAIAKDVFQHSQSRTDDKVTRFKRAVAYYSATNKPMPFHPPHYLAARPNQFGMPGIVPPYVPSQMLNIPQTSLQAKPVAQQMSNQGGAQGQGPYPYSLSEPAITLETGGKSLSEQNNYSNIPHEGKHTPLYERSSPINPAQSGSPNHVDSTYFPASSTSSSSDNDEGNGGAVNHVSGNKIGWEKTGSQSESQTRGDLGDQTKVEGSSSASSGSQAAEVKGNQTSNPQIPCLLSMPTRNHMDITTPPLPPVAPEVLRVAEHRHKKGLMYPYIFHVLTKGEIKIAVSIEDEANKDLPPAALLYRPVRQYVYGVLFSLAESRKKTERLAFRKNRLPPEFSPVIIKEWAAYKGKSPQTPELVEALAFREWTCPNLKKLWLGKAVEDKNRRMRAFLACMRSDTPAMLNPTNVPTHLMVLCCVLRYMVQWPGVRILRRQELDAFLAQALSPKLYEPDQLQELKIENLDPRGIQLSALFMSGVDMALFANDACGQPIPWEHCCPWMYFDGKLFQTKLIKASREKVPLIDLCDGQAEQAAKVEKMRQSILEGLNFSRQNHPLPFPPPPAMPFYPASMYPRHFGPVPPPQGRGRGFAGVYGFGGPYGETVATGAYRAFRVAAAAGHSGAFSGNDSNRTSKFQGGVQPIPSQGGKLEIAGTVVGHWAGSRRGRGGRGPFPLQVVSVGGPARGRPRGVISTPVIRTFGRGGRYYGRGYKSQGAIQGKPPYAASAEEVAKELKSKSEESKSSIVSSDGSLAENGVVNEEKPASQMNGNTGDIRASNQSESALSNDSKMCNTNPHLNALNADSVCHKDDTLEATVLKKEE
SIO_010081: FAM120A
subclass of: SO_0000673
so part of: FAM120A
location: join(2377581..2377647,2381976..2382058,2390880..2391008,2391449..2391545,2392261..2392361,2392636..2392919,2394220..2394307,2397788..2398012,2401288..2401462,2407008..2407257,2408504..2408618,2412251..2412460,2413514..2413697,2414653..2414790,2416235..2416376,2420257..2420353,2423046..2423357)
location: region:2377581-2423357:1
so has part: feature:2377581-2377647:1:exon
so has part: feature:2381976-2382058:1:exon
so has part: feature:2390880-2391008:1:exon
so has part: feature:2391449-2391545:1:exon
so has part: feature:2392261-2392361:1:exon
so has part: feature:2392636-2392919:1:exon
so has part: feature:2394220-2394307:1:exon
so has part: feature:2397788-2398012:1:exon
so has part: feature:2401288-2401462:1:exon
so has part: feature:2407008-2407257:1:exon
so has part: feature:2408504-2408618:1:exon
so has part: feature:2412251-2412460:1:exon
so has part: feature:2413514-2413697:1:exon
so has part: feature:2414653-2414790:1:exon
so has part: feature:2416235-2416376:1:exon
so has part: feature:2420257-2420353:1:exon
so has part: feature:2423046-2423357:1:exon

XP_030314629.1
type: Protein
SIO_000068: ncbiprotein

position:2377581:1
position: 2377581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2377581-2377647:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2381976-2382058:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2390880-2391008:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2391449-2391545:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2392261-2392361:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2392636-2392919:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2394220-2394307:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2397788-2398012:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2401288-2401462:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2407008-2407257:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2408504-2408618:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2412251-2412460:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2413514-2413697:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2414653-2414790:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2416235-2416376:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2420257-2420353:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2423046-2423357:1:exon

PHF2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PHF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2434520..2517436
location: region:2434520-2517436:1
so has part: feature:2434520-2517436:1:exon
subclass of: SO_0000010

103539841
type: Gene
SIO_000068: ncbigene

position:2434520:1
position: 2434520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2517436:1
position: 2517436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2434520-2517436:1:exon

PHF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PHF2
product: PHD finger protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030458602.1
SIO_010081: PHF2
subclass of: SO_0000673
so part of: PHF2
location: join(2434520..2434819,2476835..2476920,2481899..2482013,2484781..2484941,2489220..2489361,2491300..2491486,2492033..2492195,2493602..2493689,2494261..2494367,2495580..2495671,2496859..2496948,2498223..2498594,2499488..2499607,2500458..2500576,2501276..2501454,2501687..2501760,2503603..2503760,2510410..2510687,2512328..2512423,2513315..2513424,2514592..2514853,2517107..2517436)
location: region:2434520-2517436:1
so has part: feature:2434520-2434819:1:exon
so has part: feature:2476835-2476920:1:exon
so has part: feature:2481899-2482013:1:exon
so has part: feature:2484781-2484941:1:exon
so has part: feature:2489220-2489361:1:exon
so has part: feature:2491300-2491486:1:exon
so has part: feature:2492033-2492195:1:exon
so has part: feature:2493602-2493689:1:exon
so has part: feature:2494261-2494367:1:exon
so has part: feature:2495580-2495671:1:exon
so has part: feature:2496859-2496948:1:exon
so has part: feature:2498223-2498594:1:exon
so has part: feature:2499488-2499607:1:exon
so has part: feature:2500458-2500576:1:exon
so has part: feature:2501276-2501454:1:exon
so has part: feature:2501687-2501760:1:exon
so has part: feature:2503603-2503760:1:exon
so has part: feature:2510410-2510687:1:exon
so has part: feature:2512328-2512423:1:exon
so has part: feature:2513315-2513424:1:exon
so has part: feature:2514592-2514853:1:exon
so has part: feature:2517107-2517436:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2434520-2434819:1:exon

position:2434819:1
position: 2434819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2476835-2476920:1:exon

position:2476835:1
position: 2476835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2476920:1
position: 2476920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2481899-2482013:1:exon

position:2481899:1
position: 2481899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2482013:1
position: 2482013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2484781-2484941:1:exon

position:2484781:1
position: 2484781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2484941:1
position: 2484941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2489220-2489361:1:exon

position:2489220:1
position: 2489220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2489361:1
position: 2489361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2491300-2491486:1:exon

position:2491300:1
position: 2491300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2491486:1
position: 2491486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2492033-2492195:1:exon

position:2492033:1
position: 2492033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2492195:1
position: 2492195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2493602-2493689:1:exon

position:2493602:1
position: 2493602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2493689:1
position: 2493689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2494261-2494367:1:exon

position:2494261:1
position: 2494261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2494367:1
position: 2494367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2495580-2495671:1:exon

position:2495580:1
position: 2495580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2495671:1
position: 2495671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2496859-2496948:1:exon

position:2496859:1
position: 2496859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2496948:1
position: 2496948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2498223-2498594:1:exon

position:2498223:1
position: 2498223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2498594:1
position: 2498594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2499488-2499607:1:exon

position:2499488:1
position: 2499488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2499607:1
position: 2499607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2500458-2500576:1:exon

position:2500458:1
position: 2500458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2500576:1
position: 2500576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2501276-2501454:1:exon

position:2501276:1
position: 2501276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2501454:1
position: 2501454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2501687-2501760:1:exon

position:2501687:1
position: 2501687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2501760:1
position: 2501760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2503603-2503760:1:exon

position:2503603:1
position: 2503603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2503760:1
position: 2503760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2510410-2510687:1:exon

position:2510410:1
position: 2510410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2510687:1
position: 2510687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2512328-2512423:1:exon

position:2512328:1
position: 2512328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2512423:1
position: 2512423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2513315-2513424:1:exon

position:2513315:1
position: 2513315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2513424:1
position: 2513424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2514592-2514853:1:exon

position:2514592:1
position: 2514592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2514853:1
position: 2514853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2517107-2517436:1:exon

position:2517107:1
position: 2517107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PHF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PHF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase PHF2
translation: MATVPVYCICRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHGKSTLKKKRNWHKHDTGQPTEVKPVQNGSQVFIKELRSRTFPSAEDVVVKVPGSQLTTEYLEENGFAEPILVPKKDGLGLSVPAPTFYVSDVENYVGPERSVDVTDVTKQKDCKMKLKEFVDYYYSTNRKRVLNVTNLEFSDTRMSSFVEPPDIVKKLSWVENYWPDDALLAKPKVTKYCLICVKDSYTDFHIDSGGASAWYHVLKGEKIFYLIKPTSANISLYERWQSAANHSEMFFADQVDKCYKCTVKQGQTLFIPSGWIYATLTPVDCLAFAGHFLHSLSVEMQMRAYEVERRLKIVSLTQFPNFETACWYMGKHLLESFKGLHKAGQQPPAHLLQGAKILNGAFRSWTKKQALAEHEDELPENFKPAQLIKDLAKEIRLSENASKASKTDVSANTASEEVCPVEKEEAPSPIQTTPPPPPVEKPPKKKTPKTVKTPKQLKPSKPPKPPKPPKPPKPPKTPKVKGEGKKKGKKAKESPPPAIPNLDLLEAHTKEALTKIETPKKGKAAKNVLSVPNKETASKQNEVEKFEVREQNKSKTEAKWKYKNSKPDSLLKMEEEHKSEKAPLSGNKDNKFTFSFSNKKLLGSKGVKTQLNTSVFGSLQNFKEDKAKPVRDEYEYVSDDGELKIDEFPIRRKKNTTKRELPFLSDKKDTLQHTPVKKPKVEPVSYKSDDSSDEDLLHIDTEAKPGRNSKVKKESGSSAGILDLLQASKEVGGLEYNTNSQPPASPSTQEAIQGMLSMANLQASESCLQTSWGTNQAKNNSISAQNSKKTGGGSNKNAGKRLLKKSTKNSIDIEDYDEDQDHLDACFKDSDYVYPSLESDEDNPVFKSRSKKRKSSDDAPYSPTARVGPSVPRQDRPVREGTRVASIETGLAAAAAKLSQQEEQKGKKKKNTKKKLSTSNVNKAAQEGSSPEPKLESHASSLTDHEYTAGASAFGAAQPGKGAQPMAPGVFLTQRRPSSSSQNNASAKGKRTKKGMATAKQRLGKILKIHRNGKLLL
SIO_010081: PHF2
subclass of: SO_0000673
so part of: PHF2
location: join(2434722..2434819,2476835..2476920,2481899..2482013,2484781..2484941,2489220..2489361,2491300..2491486,2492033..2492195,2493602..2493689,2494261..2494367,2495580..2495671,2496859..2496948,2498223..2498594,2499488..2499607,2500458..2500576,2501276..2501454,2501687..2501760,2503603..2503760,2510410..2510687,2512328..2512423,2513315..2513424,2514592..2514853,2517107..2517195)
location: region:2434722-2517195:1
so has part: feature:2434722-2434819:1:exon
so has part: feature:2476835-2476920:1:exon
so has part: feature:2481899-2482013:1:exon
so has part: feature:2484781-2484941:1:exon
so has part: feature:2489220-2489361:1:exon
so has part: feature:2491300-2491486:1:exon
so has part: feature:2492033-2492195:1:exon
so has part: feature:2493602-2493689:1:exon
so has part: feature:2494261-2494367:1:exon
so has part: feature:2495580-2495671:1:exon
so has part: feature:2496859-2496948:1:exon
so has part: feature:2498223-2498594:1:exon
so has part: feature:2499488-2499607:1:exon
so has part: feature:2500458-2500576:1:exon
so has part: feature:2501276-2501454:1:exon
so has part: feature:2501687-2501760:1:exon
so has part: feature:2503603-2503760:1:exon
so has part: feature:2510410-2510687:1:exon
so has part: feature:2512328-2512423:1:exon
so has part: feature:2513315-2513424:1:exon
so has part: feature:2514592-2514853:1:exon
so has part: feature:2517107-2517195:1:exon

XP_030314462.1
type: Protein
SIO_000068: ncbiprotein

position:2434722:1
position: 2434722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2517195:1
position: 2517195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2434722-2434819:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2476835-2476920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2481899-2482013:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2484781-2484941:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2489220-2489361:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2491300-2491486:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2492033-2492195:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2493602-2493689:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2494261-2494367:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2495580-2495671:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2496859-2496948:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2498223-2498594:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2499488-2499607:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2500458-2500576:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2501276-2501454:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2501687-2501760:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2503603-2503760:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2510410-2510687:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2512328-2512423:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2513315-2513424:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2514592-2514853:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2517107-2517195:1:exon

BARX1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: BARX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2704027..2706975)
location: region:2704027-2706975:-1
so has part: feature:2704027-2706975:-1:exon
subclass of: SO_0000010

103539831
type: Gene
SIO_000068: ncbigene

position:2704027:-1
position: 2704027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2706975:-1
position: 2706975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2704027-2706975:-1:exon

BARX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: BARX1
product: BARX homeobox 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030458559.1
SIO_010081: BARX1
subclass of: SO_0000673
so part of: BARX1
location: complement(join(2704027..2704263,2704604..2704688,2704830..2705118,2706771..2706975))
location: region:2704027-2706975:-1
so has part: feature:2706771-2706975:-1:exon
so has part: feature:2704830-2705118:-1:exon
so has part: feature:2704604-2704688:-1:exon
so has part: feature:2704027-2704263:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2706771-2706975:-1:exon

position:2706771:-1
position: 2706771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2704830-2705118:-1:exon

position:2704830:-1
position: 2704830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2705118:-1
position: 2705118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2704604-2704688:-1:exon

position:2704604:-1
position: 2704604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2704688:-1
position: 2704688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2704027-2704263:-1:exon

position:2704263:-1
position: 2704263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BARX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: BARX1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: homeobox protein BarH-like 1
translation: MQHPLELGAGHYFPAEAFPDHRSHRYRSFMIEEILTDPPDTKGAAPAGELLKFGVQALLSARPYHNHLAVLKAEPAAVFKFPLAPLGCSGLGSALLAAGSGLQGGSASPHLPLELHLRGKLEAGPSEPGSKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKIVLQGGGLESPTKPKGRPKKNSXPSSEQLSEQERARDAEKPPESLGSPAEVSQEE
SIO_010081: BARX1
subclass of: SO_0000673
so part of: BARX1
location: complement(join(2704099..2704263,2704604..2704688,2704830..2705118,2706771..2706975))
location: region:2704099-2706975:-1
so has part: feature:2706771-2706975:-1:exon
so has part: feature:2704830-2705118:-1:exon
so has part: feature:2704604-2704688:-1:exon
so has part: feature:2704099-2704263:-1:exon

XP_030314419.1
type: Protein
SIO_000068: ncbiprotein

position:2704099:-1
position: 2704099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2706771-2706975:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2704830-2705118:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2704604-2704688:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2704099-2704263:-1:exon

PTPDC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PTPDC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2729580..2753540
location: region:2729580-2753540:1
so has part: feature:2729580-2753540:1:exon
subclass of: SO_0000010

103539618
type: Gene
SIO_000068: ncbigene

position:2729580:1
position: 2729580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2753540:1
position: 2753540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2729580-2753540:1:exon

PTPDC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PTPDC1
product: protein tyrosine phosphatase domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030458416.1
SIO_010081: PTPDC1
subclass of: SO_0000673
so part of: PTPDC1
location: join(2729580..2729649,2736377..2736421,2742685..2742777,2745474..2745645,2746397..2746477,2746698..2746816,2747596..2747733,2748347..2749551,2750245..2750430,2752192..2752302,2753091..2753540)
location: region:2729580-2753540:1
so has part: feature:2729580-2729649:1:exon
so has part: feature:2736377-2736421:1:exon
so has part: feature:2742685-2742777:1:exon
so has part: feature:2745474-2745645:1:exon
so has part: feature:2746397-2746477:1:exon
so has part: feature:2746698-2746816:1:exon
so has part: feature:2747596-2747733:1:exon
so has part: feature:2748347-2749551:1:exon
so has part: feature:2750245-2750430:1:exon
so has part: feature:2752192-2752302:1:exon
so has part: feature:2753091-2753540:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2729580-2729649:1:exon

position:2729649:1
position: 2729649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2736377-2736421:1:exon

position:2736377:1
position: 2736377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2736421:1
position: 2736421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2742685-2742777:1:exon

position:2742685:1
position: 2742685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2742777:1
position: 2742777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2745474-2745645:1:exon

position:2745474:1
position: 2745474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2745645:1
position: 2745645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2746397-2746477:1:exon

position:2746397:1
position: 2746397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2746477:1
position: 2746477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2746698-2746816:1:exon

position:2746698:1
position: 2746698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2746816:1
position: 2746816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2747596-2747733:1:exon

position:2747596:1
position: 2747596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2747733:1
position: 2747733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2748347-2749551:1:exon

position:2748347:1
position: 2748347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2749551:1
position: 2749551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2750245-2750430:1:exon

position:2750245:1
position: 2750245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2750430:1
position: 2750430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2752192-2752302:1:exon

position:2752192:1
position: 2752192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2752302:1
position: 2752302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2753091-2753540:1:exon

position:2753091:1
position: 2753091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTPDC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PTPDC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein tyrosine phosphatase domain-containing protein 1
translation: MKASTITHSFCGVTGTAMTAGVLLQNELPYSSLLESSVYLANMSSGSSKRPTAKYTKVGEHLRHVIPSHVQCSVACGGRACKYENPARWSDQEQAIKGLYSSWITDNILAMARPSTELIEKYNIIEQFERSGIKTIINLQRPGEHASCGNPLEQESGFSYLPEAFMEAGIYFYNFGWKDYGVASLTTILDMVKVMAFALQEGRVAVHCHAGLGRTGVLIACYLVFATRMSADQAILFVRAKRPNSIQTRGQLLCIREFTQFLVPLRNVFACCEPKSHTVTLSQYLTRQRHLLHGYESRHLKHVPKLIHLVCKLLLDLAENRQVIEAELLDIPDLTAEIEKTVSQLMSSQLDSELGRQDSDTSDSSHTHSSTCENQDSLFSLGHENDPLWKRRNAEGLQPFTHHRRRLSYSDSDLRRTEFLLEQGETAWTVPAQILKCSKDKQNSEELSATEEQKPQLDLNKEALVRNTCMFWSQGKFNLDGQKGGSSLYPRRNSVREVQRSRTFSSGLASVHSTREPGMPSHNFSTEVGHRKDHKTHMYSRRCYVSEDSDSSSSSKVNFSIGYESQSGRDTSEAIPHIVLQSELSLEARRVLAAKALADINEFLGEDEVKQKVEMWQKELNSRDGAWDKICTERDPFILCSLMWSWIEQLKEPIISTDDIDMLAKKCTESQDALYLLRKEQCQTILCILHCVVNLQMLPADVEEALLARAIKAFTKISFDSANGPYVYHTLKKVFKQTLEEKRKKLKEGTENPS
SIO_010081: PTPDC1
subclass of: SO_0000673
so part of: PTPDC1
location: join(2736379..2736421,2742685..2742777,2745474..2745645,2746397..2746477,2746698..2746816,2747596..2747733,2748347..2749551,2750245..2750430,2752192..2752302,2753091..2753207)
location: region:2736379-2753207:1
so has part: feature:2736379-2736421:1:exon
so has part: feature:2742685-2742777:1:exon
so has part: feature:2745474-2745645:1:exon
so has part: feature:2746397-2746477:1:exon
so has part: feature:2746698-2746816:1:exon
so has part: feature:2747596-2747733:1:exon
so has part: feature:2748347-2749551:1:exon
so has part: feature:2750245-2750430:1:exon
so has part: feature:2752192-2752302:1:exon
so has part: feature:2753091-2753207:1:exon

XP_030314276.1
type: Protein
SIO_000068: ncbiprotein

position:2736379:1
position: 2736379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2753207:1
position: 2753207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2736379-2736421:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2742685-2742777:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2745474-2745645:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2746397-2746477:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2746698-2746816:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2747596-2747733:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2748347-2749551:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2750245-2750430:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2752192-2752302:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2753091-2753207:1:exon

LOC115599013
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599013
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2756293..2759200)
location: region:2756293-2759200:-1
so has part: feature:2756293-2759200:-1:exon
subclass of: SO_0000011

115599013
type: Gene
SIO_000068: ncbigene

position:2756293:-1
position: 2756293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2759200:-1
position: 2759200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2756293-2759200:-1:exon

LOC115599013
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599013
product: uncharacterized LOC115599013
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988079.1
SIO_010081: LOC115599013
subclass of: SO_0000673
so part of: LOC115599013
location: complement(join(2756293..2756327,2756452..2756661,2759076..2759200))
location: region:2756293-2759200:-1
so has part: feature:2759076-2759200:-1:exon
so has part: feature:2756452-2756661:-1:exon
so has part: feature:2756293-2756327:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2759076-2759200:-1:exon

position:2759076:-1
position: 2759076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2756452-2756661:-1:exon

position:2756452:-1
position: 2756452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2756661:-1
position: 2756661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2756293-2756327:-1:exon

position:2756327:-1
position: 2756327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115599023
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599023
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2759803..2774176
location: region:2759803-2774176:1
so has part: feature:2759803-2774176:1:exon
subclass of: SO_0000011

115599023
type: Gene
SIO_000068: ncbigene

position:2759803:1
position: 2759803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2774176:1
position: 2774176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2759803-2774176:1:exon

LOC115599023
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599023
product: uncharacterized LOC115599023, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988087.1
SIO_010081: LOC115599023
subclass of: SO_0000673
so part of: LOC115599023
location: join(2759803..2759888,2770293..2770352,2771105..2771148,2773455..2774176)
location: region:2759803-2774176:1
so has part: feature:2759803-2759888:1:exon
so has part: feature:2770293-2770352:1:exon
so has part: feature:2771105-2771148:1:exon
so has part: feature:2773455-2774176:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2759803-2759888:1:exon

position:2759888:1
position: 2759888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2770293-2770352:1:exon

position:2770293:1
position: 2770293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2770352:1
position: 2770352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2771105-2771148:1:exon

position:2771105:1
position: 2771105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2771148:1
position: 2771148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2773455-2774176:1:exon

position:2773455:1
position: 2773455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115599023
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115599023
product: uncharacterized LOC115599023, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003988086.1
SIO_010081: LOC115599023
subclass of: SO_0000673
so part of: LOC115599023
location: join(2759819..2759888,2760713..2760807,2771105..2771148,2773455..2774176)
location: region:2759819-2774176:1
so has part: feature:2759819-2759888:1:exon
so has part: feature:2760713-2760807:1:exon
so has part: feature:2771105-2771148:1:exon
so has part: feature:2773455-2774176:1:exon

position:2759819:1
position: 2759819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2759819-2759888:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2760713-2760807:1:exon

position:2760713:1
position: 2760713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2760807:1
position: 2760807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2771105-2771148:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2773455-2774176:1:exon

LOC103539608
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103539608
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2793651..2826899
location: region:2793651-2826899:1
so has part: feature:2793651-2826899:1:exon
subclass of: SO_0000010

103539608
type: Gene
SIO_000068: ncbigene

position:2793651:1
position: 2793651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2826899:1
position: 2826899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2793651-2826899:1:exon

LOC103539608
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103539608
product: protein Wnt-7a
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 49 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008506123.2
SIO_010081: LOC103539608
subclass of: SO_0000673
so part of: LOC103539608
location: join(2793651..2793767,2794640..2794866,2804091..2804362,2825906..2826899)
location: region:2793651-2826899:1
so has part: feature:2793651-2793767:1:exon
so has part: feature:2794640-2794866:1:exon
so has part: feature:2804091-2804362:1:exon
so has part: feature:2825906-2826899:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2793651-2793767:1:exon

position:2793767:1
position: 2793767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2794640-2794866:1:exon

position:2794640:1
position: 2794640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2794866:1
position: 2794866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2804091-2804362:1:exon

position:2804091:1
position: 2804091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2804362:1
position: 2804362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2825906-2826899:1:exon

position:2825906:1
position: 2825906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC103539608
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103539608
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Wnt-7a
translation: MNRKTRRWIFHIFLSLGIVYIKIGGFSSVVALGASIICNKIPGLAPRQRAICQSRPDAIIVIGEGSQMGINECQFQFRNGRWNCSALGERTVFGKELKVGSREAAFTYAIIAAGVAHAITAACTQGNLSDCGCDKEKQGQYHKEEGWKWGGCSADIRYGIGFAKVFVDAREIKQNARTLMNLHNNEAGRKILEENMKLECKCHGVSGSCTTKTCWTTLPKFRDLGYILKDKYNEAVQVEPVRASRNKRPTFLKIKKPLSYRKPMDTDLVYIEKSPNYCEEDPITGSVGTQGRMCNKTAQQSNGCDLMCCGRGYNTHQYSRVWQCNCKFHWCCYVKCNTCSERTEVYTCK
SIO_010081: LOC103539608
subclass of: SO_0000673
so part of: LOC103539608
location: join(2793697..2793767,2794640..2794866,2804091..2804362,2825906..2826385)
location: region:2793697-2826385:1
so has part: feature:2793697-2793767:1:exon
so has part: feature:2794640-2794866:1:exon
so has part: feature:2804091-2804362:1:exon
so has part: feature:2825906-2826385:1:exon

XP_008504345.1
type: Protein
SIO_000068: ncbiprotein

position:2793697:1
position: 2793697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2826385:1
position: 2826385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2793697-2793767:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2794640-2794866:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2804091-2804362:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2825906-2826385:1:exon

LOC103539820
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103539820
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3023664..3028475
location: region:3023664-3028475:1
so has part: feature:3023664-3028475:1:exon
subclass of: SO_0000010

103539820
type: Gene
SIO_000068: ncbigene

position:3023664:1
position: 3023664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3028475:1
position: 3028475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3023664-3028475:1:exon

LOC103539820
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103539820
product: heat shock factor protein 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_030458619.1
SIO_010081: LOC103539820
subclass of: SO_0000673
so part of: LOC103539820
location: join(3023664..3024195,3024664..3024926,3026366..3026548,3028365..3028475)
location: region:3023664-3028475:1
so has part: feature:3023664-3024195:1:exon
so has part: feature:3024664-3024926:1:exon
so has part: feature:3026366-3026548:1:exon
so has part: feature:3028365-3028475:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3023664-3024195:1:exon

position:3024195:1
position: 3024195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3024664-3024926:1:exon

position:3024664:1
position: 3024664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3024926:1
position: 3024926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3026366-3026548:1:exon

position:3026366:1
position: 3026366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3026548:1
position: 3026548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3028365-3028475:1:exon

position:3028365:1
position: 3028365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC103539820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103539820
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock factor protein 5
translation: MEETRLPAPVNPSTFPAKLWLLVNSPRCGSVRWDARGEGLLIEQALLERELLGAGPGLAAGLAGDGAEVFKTRNFSSLVRQLNLYGFRKVVAVPGAEPGPEGDSGAGGSSAGPLHHFRSPHFRRDRPDLLAQIKRLTRANRAKLAAGLEVGSRPANRVRRLMGTALPGDLLPKANGPGYEASPASTGKGAALPLLQRCSTEVTYTVRPVPSILPLEQWSRPTGVKHTSALVFRKETQMSSVVSSSSQNPTASIESKGRETLKSRQTPPAQSPCAAEFPPSSCPCGTSEDNSQAEVNLDYVFQLVEEMCSPLPGERAPVQSAAAEILISTCREMHPASGAAFRRKKEASEEQGISRIISSLLE
SIO_010081: LOC103539820
subclass of: SO_0000673
so part of: LOC103539820
location: join(3023664..3024195,3024664..3024926,3026366..3026548,3028365..3028475)
location: region:3023664-3028475:1
so has part: feature:3023664-3024195:1:exon
so has part: feature:3024664-3024926:1:exon
so has part: feature:3026366-3026548:1:exon
so has part: feature:3028365-3028475:1:exon

XP_030314479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3023664-3024195:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3024664-3024926:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3026366-3026548:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3028365-3028475:1:exon

LOC103532604
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103532604
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3045593..3046489)
location: region:3045593-3046489:-1
so has part: feature:3045593-3046489:-1:exon

103532604
type: Gene
SIO_000068: ncbigene

position:3045593:-1
position: 3045593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3046489:-1
position: 3046489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3045593-3046489:-1:exon

LOC103532604
type: Exon
subclass of: SO_0000147
RO_0002162: 9244
gene: LOC103532604
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
pseudo: true
SIO_010081: LOC103532604
subclass of: SO_0000673
so part of: LOC103532604
location: complement(3045593..3046489)
location: region:3045593-3046489:-1
so has part: feature:3045593-3046489:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3045593-3046489:-1:exon

LOC115599016
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599016
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3065480..3066440)
location: region:3065480-3066440:-1
so has part: feature:3065480-3066440:-1:exon

115599016
type: Gene
SIO_000068: ncbigene

position:3065480:-1
position: 3065480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3066440:-1
position: 3066440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3065480-3066440:-1:exon

LOC115599016
type: Exon
subclass of: SO_0000147
RO_0002162: 9244
gene: LOC115599016
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 26% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115599016
subclass of: SO_0000673
so part of: LOC115599016
location: complement(3065480..3066440)
location: region:3065480-3066440:-1
so has part: feature:3065480-3066440:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3065480-3066440:-1:exon

RAB43
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: RAB43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3110694..>3111008)
location: region:3110694-3111008:-1
so has part: feature:3110694-3111008:-1:exon
subclass of: SO_0000010

115599017
type: Gene
SIO_000068: ncbigene

position:3110694:-1
position: 3110694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3111008:-1
position: 3111008
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3110694-3111008:-1:exon

RAB43
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RAB43
product: RAB43, member RAS oncogene family
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030458621.1
SIO_010081: RAB43
subclass of: SO_0000673
so part of: RAB43
location: complement(3110694..>3111008)
location: region:3110694-3111008:-1
so has part: feature:3110694-3111008:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3110694-3111008:-1:exon

RAB43
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RAB43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-43
translation: GPGQAGGGGRCSEPRSPRRRAEGRNGSAIPSPAVPGAAGPSPDPEESYDFLFKLVLIGDASVGKTCLVQRFKTGAFAERQGSTIGVDLTMKSLEIQGKRLKVSG
SIO_010081: RAB43
subclass of: SO_0000673
so part of: RAB43
location: complement(3110694..>3111008)
location: region:3110694-3111008:-1
so has part: feature:3110694-3111008:-1:exon

XP_030314481.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3110694-3111008:-1:exon

LOC103537622
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103537622
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3125619..3126125)
location: region:3125619-3126125:-1
so has part: feature:3125619-3126125:-1:exon
subclass of: SO_0000010

103537622
type: Gene
SIO_000068: ncbigene

position:3125619:-1
position: 3125619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3126125:-1
position: 3126125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3125619-3126125:-1:exon

LOC103537622
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103537622
product: platelet glycoprotein IX
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 4 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008503927.2
SIO_010081: LOC103537622
subclass of: SO_0000673
so part of: LOC103537622
location: complement(3125619..3126125)
location: region:3125619-3126125:-1
so has part: feature:3125619-3126125:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3125619-3126125:-1:exon

LOC103537622
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103537622
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 4 bases in 2 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(3125837..3125839),aa:OTHER)
product: LOW QUALITY PROTEIN: platelet glycoprotein IX
translation: MTQTEGCPLSCNCKLLGEEEGLQVDCSSRELVELPALPANTKRLYLQNQQPDLGPPGPWTACNSLEEVKVVDNPWHCDCHILYFKTWLEDTSASXLANIRCASPAPVRMKALRQLSGNELGVCKRLLPVKCLEFFWRDLXLIAGAIITLLLVAWALKGSKKLVCQKT
SIO_010081: LOC103537622
subclass of: SO_0000673
so part of: LOC103537622
location: complement(3125619..3126125)
location: region:3125619-3126125:-1
so has part: feature:3125619-3126125:-1:exon

XP_008502149.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3125619-3126125:-1:exon

EFCC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: EFCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3150523..3192269)
location: region:3150523-3192269:-1
so has part: feature:3150523-3192269:-1:exon
subclass of: SO_0000010

103533179
type: Gene
SIO_000068: ncbigene

position:3150523:-1
position: 3150523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3192269:-1
position: 3192269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3150523-3192269:-1:exon

EFCC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: EFCC1
product: EF-hand and coiled-coil domain containing 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 5% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030458605.1
SIO_010081: EFCC1
subclass of: SO_0000673
so part of: EFCC1
location: complement(join(3150523..3150656,3152109..3152178,3154179..3154337,3160323..3160479,3160767..3160887,3161702..3161847,3189927..3190333,3191626..3192269))
location: region:3150523-3192269:-1
so has part: feature:3191626-3192269:-1:exon
so has part: feature:3189927-3190333:-1:exon
so has part: feature:3161702-3161847:-1:exon
so has part: feature:3160767-3160887:-1:exon
so has part: feature:3160323-3160479:-1:exon
so has part: feature:3154179-3154337:-1:exon
so has part: feature:3152109-3152178:-1:exon
so has part: feature:3150523-3150656:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3191626-3192269:-1:exon

position:3191626:-1
position: 3191626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3189927-3190333:-1:exon

position:3189927:-1
position: 3189927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3190333:-1
position: 3190333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3161702-3161847:-1:exon

position:3161702:-1
position: 3161702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3161847:-1
position: 3161847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3160767-3160887:-1:exon

position:3160767:-1
position: 3160767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3160887:-1
position: 3160887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3160323-3160479:-1:exon

position:3160323:-1
position: 3160323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3160479:-1
position: 3160479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3154179-3154337:-1:exon

position:3154179:-1
position: 3154179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3154337:-1
position: 3154337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3152109-3152178:-1:exon

position:3152109:-1
position: 3152109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3152178:-1
position: 3152178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3150523-3150656:-1:exon

position:3150656:-1
position: 3150656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EFCC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: EFCC1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: EF-hand and coiled-coil domain-containing protein 1
translation: MEPSEGWDPYGRPARRTQWLVSALAHHYGLDRGVENEIVVLATGLDQYLQEIFHHLDCSGEGRIPGEDFQTLCQVLGLKEADEPEECRGLWQDLSAGLTFRQFHARLCGYFSREEGEQHPRLPLGRESEHIETQIWLRXPRRRRLPPAGPAAGRGEAAAGEGIPCSRECYEEIVALEQAEDRIARLEEENGSLRELVEDMRAALQSSDARCLALQVGTAEKPRKAQEEGTCFIGSNRQFTRPNSQSKCLQSVLKEVELIQSSRTGKLKXAMKFNQELERELKSSQEALVSLEDCNRNLKREQAEMRKKVEEARHAVLNSLSKVRELEMKANQVPQLQDYIEQLESQLQLYRSEMGRFQLSSGSSPEQKVGAAFPEGSSSLAAAQHHQGSPQGRAGMAENAEAQLLCLVEGQAAPEEEEGKRAGGSHGKERPAKLPCWGSGCDEKLWEKLMFHLEASSSDGQELELAERIPQLTEQPELKGHQGKKLETNMEELKSPLLGEPQQKAEETELLKMELQMLETERVRLSLVEEKLLDVLQLLQQLRDLNISKRALGKILLSTLESCHDPQPGKAHLFEVLDTLYQELRACELFQRQPAEKVQGQQSLANPLVISC
SIO_010081: EFCC1
subclass of: SO_0000673
so part of: EFCC1
location: complement(join(3150523..3150656,3152109..3152178,3154179..3154337,3160323..3160479,3160767..3160887,3161702..3161847,3189927..3190333,3191626..3192269))
location: region:3150523-3192269:-1
so has part: feature:3191626-3192269:-1:exon
so has part: feature:3189927-3190333:-1:exon
so has part: feature:3161702-3161847:-1:exon
so has part: feature:3160767-3160887:-1:exon
so has part: feature:3160323-3160479:-1:exon
so has part: feature:3154179-3154337:-1:exon
so has part: feature:3152109-3152178:-1:exon
so has part: feature:3150523-3150656:-1:exon

XP_030314465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3191626-3192269:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3189927-3190333:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3161702-3161847:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3160767-3160887:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3160323-3160479:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3154179-3154337:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3152109-3152178:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3150523-3150656:-1:exon

LOC115599018
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115599018
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3198451..3198861)
location: region:3198451-3198861:-1
so has part: feature:3198451-3198861:-1:exon
subclass of: SO_0000010

115599018
type: Gene
SIO_000068: ncbigene

position:3198451:-1
position: 3198451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3198861:-1
position: 3198861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3198451-3198861:-1:exon

LOC115599018
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC115599018
product: proline-rich receptor-like protein kinase PERK2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_030458622.1
SIO_010081: LOC115599018
subclass of: SO_0000673
so part of: LOC115599018
location: complement(3198451..3198861)
location: region:3198451-3198861:-1
so has part: feature:3198451-3198861:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3198451-3198861:-1:exon

LOC115599018
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC115599018
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich receptor-like protein kinase PERK2
translation: MAAGAEGPGHHRLGNPAPPSPCHPGSQPLVTSAPPLTLSPRLPTPVTSAPPSPCHLGSQPLSPRLPTPLTSASDPLSPRLHPHPVTSAPPSPCYLGSTLTLLSRLPTLSPRLHPHPLSPRFPTVVTGLPAASPCPS
SIO_010081: LOC115599018
subclass of: SO_0000673
so part of: LOC115599018
location: complement(3198451..3198861)
location: region:3198451-3198861:-1
so has part: feature:3198451-3198861:-1:exon

XP_030314482.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3198451-3198861:-1:exon

KIAA1257
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: KIAA1257
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3199311..3224820
location: region:3199311-3224820:1
so has part: feature:3199311-3224820:1:exon
subclass of: SO_0000010

115599019
type: Gene
SIO_000068: ncbigene

position:3199311:1
position: 3199311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3224820:1
position: 3224820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3199311-3224820:1:exon

KIAA1257
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: KIAA1257
product: KIAA1257 ortholog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 3% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030458623.1
SIO_010081: KIAA1257
subclass of: SO_0000673
so part of: KIAA1257
location: join(3199311..3199506,3199622..3199818,3201058..3201121,3205238..3205319,3208891..3208946,3213029..3213213,3214745..3215634,3216609..3216803,3219832..3220096,3221608..3221772,3222279..3222491,3224656..3224820)
location: region:3199311-3224820:1
so has part: feature:3199311-3199506:1:exon
so has part: feature:3199622-3199818:1:exon
so has part: feature:3201058-3201121:1:exon
so has part: feature:3205238-3205319:1:exon
so has part: feature:3208891-3208946:1:exon
so has part: feature:3213029-3213213:1:exon
so has part: feature:3214745-3215634:1:exon
so has part: feature:3216609-3216803:1:exon
so has part: feature:3219832-3220096:1:exon
so has part: feature:3221608-3221772:1:exon
so has part: feature:3222279-3222491:1:exon
so has part: feature:3224656-3224820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3199311-3199506:1:exon

position:3199506:1
position: 3199506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3199622-3199818:1:exon

position:3199622:1
position: 3199622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3199818:1
position: 3199818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3201058-3201121:1:exon

position:3201058:1
position: 3201058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3201121:1
position: 3201121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3205238-3205319:1:exon

position:3205238:1
position: 3205238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3205319:1
position: 3205319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3208891-3208946:1:exon

position:3208891:1
position: 3208891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3208946:1
position: 3208946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3213029-3213213:1:exon

position:3213029:1
position: 3213029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3213213:1
position: 3213213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3214745-3215634:1:exon

position:3214745:1
position: 3214745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3215634:1
position: 3215634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3216609-3216803:1:exon

position:3216609:1
position: 3216609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3216803:1
position: 3216803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3219832-3220096:1:exon

position:3219832:1
position: 3219832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3220096:1
position: 3220096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3221608-3221772:1:exon

position:3221608:1
position: 3221608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3221772:1
position: 3221772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3222279-3222491:1:exon

position:3222279:1
position: 3222279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3222491:1
position: 3222491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3224656-3224820:1:exon

position:3224656:1
position: 3224656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KIAA1257
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: KIAA1257
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein KIAA1257 homolog
translation: METDLDTTSSSEAANLEVLRGGGHLTPDGESSRLPPSENSCVELDGSHPVTCTLTISLAVPILSTGQKQQKPSPSNTQGKQIKADELGATPSVHYSYHIEYLLLPDDLEPRKLELVVFGVAAKLLTESDSEDKGVSKPKYSKPLLEEDAEAVEKETDLNELATSDGLLHPSRTEDGSTASSVMFEKKQSVKQKRVSRSGVKSVTSHLAGANPDVLDAYVSFSVDTPLLSERQRHELNPLVIRITSATCLPNTPVPIAVLQKLCIPTYCKYKFHNFPPHQTHGQIHGTHVYFKDVNVLLTGLMKPGELQMCLQGPPLEIEVHDRDRNMENSKKEPSLSGKDETGEKVDKLSFLACKCTDQKPFTKSTVRHPHGVAKVSLSDLLLGQKYLNISAPIHSCSASDPAALSEEDEKQTRTESMSSSSPLPMGHYLESDSVLTVRVEIAVPLGVHEENADAGVTSCPYGLIIYIFDYNNSSLLHDLVEQITEINAKGLQLDCSPVHLMGMALAASKLKTTPEKVSQLDVVTGFHLMDGSTHLFVLEGLKDKAIRRLWERHLERTHRQEGGQLEVLYNFQLSFHHRQYADLESLCYHFCLCQPLCTLTKQPLLYVRRMVPYICFQALSRLSFLCGSKRLRTVIRGDLLPSAEMIRVLSHEYGVPLKDEHLFPQKPPLVAFGDTGEVGKVEQEHSLLDTNSEMCVQKKEETAEKNYIRANISALCQLQGKMKKPKLEVFRVSPVAGKNVFNYSCQRLNSAELAKQQLRQELAKKPKKRFTYCQEYLSATFDLVDVDAACKESYAHSKSMWMSPDGFVLPGCKSSIESSLHPLLCDGARGKELQEQWQENALHAHLRPVLPRDRWSWDKRHLDFDLYKKPPELFMLTAPQNGNGSVTIL
SIO_010081: KIAA1257
subclass of: SO_0000673
so part of: KIAA1257
location: join(3199311..3199506,3199622..3199818,3201058..3201121,3205238..3205319,3208891..3208946,3213029..3213213,3214745..3215634,3216609..3216803,3219832..3220096,3221608..3221772,3222279..3222491,3224656..3224820)
location: region:3199311-3224820:1
so has part: feature:3199311-3199506:1:exon
so has part: feature:3199622-3199818:1:exon
so has part: feature:3201058-3201121:1:exon
so has part: feature:3205238-3205319:1:exon
so has part: feature:3208891-3208946:1:exon
so has part: feature:3213029-3213213:1:exon
so has part: feature:3214745-3215634:1:exon
so has part: feature:3216609-3216803:1:exon
so has part: feature:3219832-3220096:1:exon
so has part: feature:3221608-3221772:1:exon
so has part: feature:3222279-3222491:1:exon
so has part: feature:3224656-3224820:1:exon

XP_030314483.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3199311-3199506:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3199622-3199818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3201058-3201121:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3205238-3205319:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3208891-3208946:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3213029-3213213:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3214745-3215634:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3216609-3216803:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3219832-3220096:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3221608-3221772:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3222279-3222491:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3224656-3224820:1:exon

ACAD9
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ACAD9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3230653..3252513)
location: region:3230653-3252513:-1
so has part: feature:3230653-3252513:-1:exon
subclass of: SO_0000010

103533180
type: Gene
SIO_000068: ncbigene

position:3230653:-1
position: 3230653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3252513:-1
position: 3252513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3230653-3252513:-1:exon

ACAD9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ACAD9
product: acyl-CoA dehydrogenase family member 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 18 ESTs, 1 long SRA read, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_008499016.2
SIO_010081: ACAD9
subclass of: SO_0000673
so part of: ACAD9
location: complement(join(3230653..3230970,3231460..3231532,3232148..3232276,3233023..3233100,3234739..3234865,3235398..3235477,3237116..3237244,3237749..3237868,3238208..3238278,3238885..3238960,3240369..3240442,3241047..3241221,3242096..3242174,3243883..3243983,3245334..3245440,3248907..3249008,3250991..3251084,3252293..3252513))
location: region:3230653-3252513:-1
so has part: feature:3252293-3252513:-1:exon
so has part: feature:3250991-3251084:-1:exon
so has part: feature:3248907-3249008:-1:exon
so has part: feature:3245334-3245440:-1:exon
so has part: feature:3243883-3243983:-1:exon
so has part: feature:3242096-3242174:-1:exon
so has part: feature:3241047-3241221:-1:exon
so has part: feature:3240369-3240442:-1:exon
so has part: feature:3238885-3238960:-1:exon
so has part: feature:3238208-3238278:-1:exon
so has part: feature:3237749-3237868:-1:exon
so has part: feature:3237116-3237244:-1:exon
so has part: feature:3235398-3235477:-1:exon
so has part: feature:3234739-3234865:-1:exon
so has part: feature:3233023-3233100:-1:exon
so has part: feature:3232148-3232276:-1:exon
so has part: feature:3231460-3231532:-1:exon
so has part: feature:3230653-3230970:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3252293-3252513:-1:exon

position:3252293:-1
position: 3252293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3250991-3251084:-1:exon

position:3250991:-1
position: 3250991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3251084:-1
position: 3251084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3248907-3249008:-1:exon

position:3248907:-1
position: 3248907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3249008:-1
position: 3249008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3245334-3245440:-1:exon

position:3245334:-1
position: 3245334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3245440:-1
position: 3245440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3243883-3243983:-1:exon

position:3243883:-1
position: 3243883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3243983:-1
position: 3243983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3242096-3242174:-1:exon

position:3242096:-1
position: 3242096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3242174:-1
position: 3242174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3241047-3241221:-1:exon

position:3241047:-1
position: 3241047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3241221:-1
position: 3241221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3240369-3240442:-1:exon

position:3240369:-1
position: 3240369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3240442:-1
position: 3240442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3238885-3238960:-1:exon

position:3238885:-1
position: 3238885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3238960:-1
position: 3238960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3238208-3238278:-1:exon

position:3238208:-1
position: 3238208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3238278:-1
position: 3238278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3237749-3237868:-1:exon

position:3237749:-1
position: 3237749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3237868:-1
position: 3237868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3237116-3237244:-1:exon

position:3237116:-1
position: 3237116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3237244:-1
position: 3237244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3235398-3235477:-1:exon

position:3235398:-1
position: 3235398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3235477:-1
position: 3235477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3234739-3234865:-1:exon

position:3234739:-1
position: 3234739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3234865:-1
position: 3234865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3233023-3233100:-1:exon

position:3233023:-1
position: 3233023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3233100:-1
position: 3233100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3232148-3232276:-1:exon

position:3232148:-1
position: 3232148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3232276:-1
position: 3232276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3231460-3231532:-1:exon

position:3231460:-1
position: 3231460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3231532:-1
position: 3231532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3230653-3230970:-1:exon

position:3230970:-1
position: 3230970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ACAD9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ACAD9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acyl-CoA dehydrogenase family member 9, mitochondrial
translation: MSGILLRGLRFATGTALPRNTPLPRSAPLPRNIARRLRTAVPRHAFAKELFLGALRKEEVFPYPEITNEELQEITQFVGPVEKFFNEEVDSKKIDRDAKIPPETLKGLKDLGLFGMQIPEEYGGLGLSNTMYARLGEITSLDGSIAVTLAAHQAIGLKGILIAGTDEQKAKYLPRLASGEHIAAFCLTEPGSGSDAASIQTRATLSEDGKYFLLNGSKVWISNGGLADIFTVFARTEVVDKDGKVKDKITAFIVERDFGGVTHGKPEDKLGIRGSNTCEVHFENTKVPIENVIGEVGGGFKVAMNILNSGRFSMGSASAGMIKKLIEMTAEYACTRKQFDKKLSDFGLIQEKFSLMAVKAYVMESMAYLTAGMMDRPGFPDCSVEAAMVKVFSSEGAWVCVSEALQILGGLGYMKDYPYERFLRDTRILLIFEGTNEILRLYIALTGMQYAGRILTDKIKEIKKGNVGVALGEFLNKLRDMMGRKVDYGLVGSHGVVHPSLQESGKKLEENIYYFGTTVRGLLSRFGKTIVDEQLVLKRVADVVINLYAMTAAISRASRSISIGLRNHDHEVLLTNIFCTEAYFKNNYAMAQLEKYADENLDDFIKKAAKQVLEKRAYICSHPLDRTF
SIO_010081: ACAD9
subclass of: SO_0000673
so part of: ACAD9
location: complement(join(3230870..3230970,3231460..3231532,3232148..3232276,3233023..3233100,3234739..3234865,3235398..3235477,3237116..3237244,3237749..3237868,3238208..3238278,3238885..3238960,3240369..3240442,3241047..3241221,3242096..3242174,3243883..3243983,3245334..3245440,3248907..3249008,3250991..3251084,3252293..3252463))
location: region:3230870-3252463:-1
so has part: feature:3252293-3252463:-1:exon
so has part: feature:3250991-3251084:-1:exon
so has part: feature:3248907-3249008:-1:exon
so has part: feature:3245334-3245440:-1:exon
so has part: feature:3243883-3243983:-1:exon
so has part: feature:3242096-3242174:-1:exon
so has part: feature:3241047-3241221:-1:exon
so has part: feature:3240369-3240442:-1:exon
so has part: feature:3238885-3238960:-1:exon
so has part: feature:3238208-3238278:-1:exon
so has part: feature:3237749-3237868:-1:exon
so has part: feature:3237116-3237244:-1:exon
so has part: feature:3235398-3235477:-1:exon
so has part: feature:3234739-3234865:-1:exon
so has part: feature:3233023-3233100:-1:exon
so has part: feature:3232148-3232276:-1:exon
so has part: feature:3231460-3231532:-1:exon
so has part: feature:3230870-3230970:-1:exon

XP_008497238.2
type: Protein
SIO_000068: ncbiprotein

position:3230870:-1
position: 3230870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3252463:-1
position: 3252463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3252293-3252463:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3250991-3251084:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3248907-3249008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3245334-3245440:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3243883-3243983:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3242096-3242174:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3241047-3241221:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3240369-3240442:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3238885-3238960:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3238208-3238278:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3237749-3237868:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3237116-3237244:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3235398-3235477:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3234739-3234865:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3233023-3233100:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3232148-3232276:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3231460-3231532:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3230870-3230970:-1:exon

IQSEC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: IQSEC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3261036..3590144)
location: region:3261036-3590144:-1
so has part: feature:3261036-3590144:-1:exon
subclass of: SO_0000010

103533111
type: Gene
SIO_000068: ncbigene

position:3261036:-1
position: 3261036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3590144:-1
position: 3590144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3261036-3590144:-1:exon

IQSEC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: IQSEC1
product: IQ motif and Sec7 domain 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 ESTs, 7 long SRA reads, 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030458205.1
SIO_010081: IQSEC1
subclass of: SO_0000673
so part of: IQSEC1
location: complement(join(3261036..3265607,3266989..3267038,3274285..3274461,3275166..3275327,3278576..3278675,3280091..3280216,3281330..3281359,3282871..3283010,3286834..3287000,3287763..3287885,3291891..3292052,3309984..3311248,3314864..3315143,3416933..3416977,3519533..3519562,3589635..3590144))
location: region:3261036-3590144:-1
so has part: feature:3589635-3590144:-1:exon
so has part: feature:3519533-3519562:-1:exon
so has part: feature:3416933-3416977:-1:exon
so has part: feature:3314864-3315143:-1:exon
so has part: feature:3309984-3311248:-1:exon
so has part: feature:3291891-3292052:-1:exon
so has part: feature:3287763-3287885:-1:exon
so has part: feature:3286834-3287000:-1:exon
so has part: feature:3282871-3283010:-1:exon
so has part: feature:3281330-3281359:-1:exon
so has part: feature:3280091-3280216:-1:exon
so has part: feature:3278576-3278675:-1:exon
so has part: feature:3275166-3275327:-1:exon
so has part: feature:3274285-3274461:-1:exon
so has part: feature:3266989-3267038:-1:exon
so has part: feature:3261036-3265607:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3589635-3590144:-1:exon

position:3589635:-1
position: 3589635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3519533-3519562:-1:exon

position:3519533:-1
position: 3519533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3519562:-1
position: 3519562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3416933-3416977:-1:exon

position:3416933:-1
position: 3416933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3416977:-1
position: 3416977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3314864-3315143:-1:exon

position:3314864:-1
position: 3314864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3315143:-1
position: 3315143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3309984-3311248:-1:exon

position:3309984:-1
position: 3309984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3311248:-1
position: 3311248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3291891-3292052:-1:exon

position:3291891:-1
position: 3291891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3292052:-1
position: 3292052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3287763-3287885:-1:exon

position:3287763:-1
position: 3287763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3287885:-1
position: 3287885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3286834-3287000:-1:exon

position:3286834:-1
position: 3286834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3287000:-1
position: 3287000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3282871-3283010:-1:exon

position:3282871:-1
position: 3282871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3283010:-1
position: 3283010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3281330-3281359:-1:exon

position:3281330:-1
position: 3281330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3281359:-1
position: 3281359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3280091-3280216:-1:exon

position:3280091:-1
position: 3280091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3280216:-1
position: 3280216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3278576-3278675:-1:exon

position:3278576:-1
position: 3278576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3278675:-1
position: 3278675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3275166-3275327:-1:exon

position:3275166:-1
position: 3275166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3275327:-1
position: 3275327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3274285-3274461:-1:exon

position:3274285:-1
position: 3274285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3274461:-1
position: 3274461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3266989-3267038:-1:exon

position:3266989:-1
position: 3266989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3267038:-1
position: 3267038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3261036-3265607:-1:exon

position:3265607:-1
position: 3265607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IQSEC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: IQSEC1
product: IQ motif and Sec7 domain 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 ESTs, 6 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_008498935.2
SIO_010081: IQSEC1
subclass of: SO_0000673
so part of: IQSEC1
location: complement(join(3261036..3265607,3266989..3267038,3274285..3274461,3275166..3275327,3278576..3278675,3280091..3280216,3281330..3281359,3282871..3283010,3286834..3287000,3287763..3287885,3291891..3292052,3309984..3311248,3314864..3315143,3416933..3416977,3440057..3440143,3519533..3519562,3589635..3589946))
location: region:3261036-3589946:-1
so has part: feature:3589635-3589946:-1:exon
so has part: feature:3519533-3519562:-1:exon
so has part: feature:3440057-3440143:-1:exon
so has part: feature:3416933-3416977:-1:exon
so has part: feature:3314864-3315143:-1:exon
so has part: feature:3309984-3311248:-1:exon
so has part: feature:3291891-3292052:-1:exon
so has part: feature:3287763-3287885:-1:exon
so has part: feature:3286834-3287000:-1:exon
so has part: feature:3282871-3283010:-1:exon
so has part: feature:3281330-3281359:-1:exon
so has part: feature:3280091-3280216:-1:exon
so has part: feature:3278576-3278675:-1:exon
so has part: feature:3275166-3275327:-1:exon
so has part: feature:3274285-3274461:-1:exon
so has part: feature:3266989-3267038:-1:exon
so has part: feature:3261036-3265607:-1:exon

position:3589946:-1
position: 3589946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3589635-3589946:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3519533-3519562:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3440057-3440143:-1:exon

position:3440057:-1
position: 3440057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3440143:-1
position: 3440143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3416933-3416977:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3314864-3315143:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3309984-3311248:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3291891-3292052:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3287763-3287885:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3286834-3287000:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3282871-3283010:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3281330-3281359:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3280091-3280216:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3278576-3278675:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3275166-3275327:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3274285-3274461:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3266989-3267038:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3261036-3265607:-1:exon

IQSEC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: IQSEC1
product: IQ motif and Sec7 domain 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 ESTs, 8 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030458208.1
SIO_010081: IQSEC1
subclass of: SO_0000673
so part of: IQSEC1
location: complement(join(3261036..3265607,3266989..3267038,3274285..3274461,3275166..3275327,3278576..3278675,3280091..3280216,3281330..3281359,3282871..3283010,3286834..3287000,3287763..3287885,3291891..3292052,3309984..3311248,3314864..3315143,3364808..3365051))
location: region:3261036-3365051:-1
so has part: feature:3364808-3365051:-1:exon
so has part: feature:3314864-3315143:-1:exon
so has part: feature:3309984-3311248:-1:exon
so has part: feature:3291891-3292052:-1:exon
so has part: feature:3287763-3287885:-1:exon
so has part: feature:3286834-3287000:-1:exon
so has part: feature:3282871-3283010:-1:exon
so has part: feature:3281330-3281359:-1:exon
so has part: feature:3280091-3280216:-1:exon
so has part: feature:3278576-3278675:-1:exon
so has part: feature:3275166-3275327:-1:exon
so has part: feature:3274285-3274461:-1:exon
so has part: feature:3266989-3267038:-1:exon
so has part: feature:3261036-3265607:-1:exon

position:3365051:-1
position: 3365051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3364808-3365051:-1:exon

position:3364808:-1
position: 3364808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3314864-3315143:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3309984-3311248:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3291891-3292052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3287763-3287885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3286834-3287000:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3282871-3283010:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3281330-3281359:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3280091-3280216:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3278576-3278675:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3275166-3275327:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3274285-3274461:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3266989-3267038:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3261036-3265607:-1:exon

IQSEC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: IQSEC1
product: IQ motif and Sec7 domain 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 ESTs, 6 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030458206.1
SIO_010081: IQSEC1
subclass of: SO_0000673
so part of: IQSEC1
location: complement(join(3261036..3265607,3266989..3267038,3274285..3274461,3275166..3275327,3278576..3278675,3280091..3280216,3281330..3281359,3282871..3283010,3286834..3287000,3287763..3287885,3291891..3292052,3309984..3311248,3314864..3315143,3331566..3331700))
location: region:3261036-3331700:-1
so has part: feature:3331566-3331700:-1:exon
so has part: feature:3314864-3315143:-1:exon
so has part: feature:3309984-3311248:-1:exon
so has part: feature:3291891-3292052:-1:exon
so has part: feature:3287763-3287885:-1:exon
so has part: feature:3286834-3287000:-1:exon
so has part: feature:3282871-3283010:-1:exon
so has part: feature:3281330-3281359:-1:exon
so has part: feature:3280091-3280216:-1:exon
so has part: feature:3278576-3278675:-1:exon
so has part: feature:3275166-3275327:-1:exon
so has part: feature:3274285-3274461:-1:exon
so has part: feature:3266989-3267038:-1:exon
so has part: feature:3261036-3265607:-1:exon

position:3331700:-1
position: 3331700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3331566-3331700:-1:exon

position:3331566:-1
position: 3331566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3314864-3315143:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3309984-3311248:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3291891-3292052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3287763-3287885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3286834-3287000:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3282871-3283010:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3281330-3281359:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3280091-3280216:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3278576-3278675:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3275166-3275327:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3274285-3274461:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3266989-3267038:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3261036-3265607:-1:exon

IQSEC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: IQSEC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IQ motif and SEC7 domain-containing protein 1 isoform X2
translation: MESPAENPSKAAEYLKELNKIIETQQELLEKQKRRIDELEQQVAKLYHENACLQDEHHRHLATCRLQQSVPPAYPGVLSAIQENAKHEKSEGESSRSLRASLETGSSVSTDPLSVEGEAPSSETGTSLDSPSAYHQGPITHSAALSPEHYEHSAYGLYSVSPGQRARRPKLQHSTSILRKQAEEEAIKRSRSLSESYELSSDLQDKQVEMLERKYGGRLITRHAARTIQTAFRQYQMNKNFERLRSSMSENRMSRRIVLSNMRMQFSFEGPEKVHSSYFEGKQVSVTNDGSKLGSLVPSECGELGEPATMKSPAASTDFSDAITELEDAFSRQVKSLAESIDDALNCRSLHSDEVQTPDQVRSREMERDSCPPTKPAIHNVDHRKLDEMTASYSDVTLYIDEEELSPPLPLSQSVDRPSSTESDLRLRSVNSSQEYWSMTHKDDKIDTDTSCRSTPSLECQEQRMRMDHLPLLTIEPPSDSSVDLSDRSDRGSLKRQNAYDRGITSQQGSPKHIPHSIPAKIISREEQEARHRARPIDSHLAINGTANRQSKSESDYSDGDNDSINSTSNSNDTINCSSESSSRDSLREQTLSKQTYHKETRNSWDSPAFSNDVIRKRHYRIGLNLFNKKPEKGVQYLIERGFVPDTPVGVAHFLLQRKGLSRQMIGEFLGNRQKQFNRDVLDCVVDEMDFSTMELDEALRKFQAHIRVQGEAQKVERLIEAFSQRYCICNPGVVRQFRNPDTIFILAFAIILLNTDMYSPNVKPERKMKLEDFVKNLRGVDDGEDIPREMLIGIYERIRKRELKTNEDHVSQVQKVEKLIVGKKPIGSLHHGLGCVLSLPHRRLVCYCRLFEVPDPNKPQKLGLHQREIFLFNDLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVLLFENQYYPNGIRLTSAVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEVQEMEKHRIESELEKQKGVVRPSMSQCSSLKKDSGNGTLNRACLDDSYATGEGLKRSALSSSLRDLSEAGKRGRRSSAGSLDSNMEGSIISSPHMRRRATSTRECPSRPHQTMPNSSSLLGSLFGSKRGKPPSQGHPPSGSSQQPPHPPVVPHQQHSQHPSAMHHAGTAEGQTQAQVHSHHSQYCHMQQNPPPYHHHHHYHPPQHIQHPHQYHQHVPHSQHAAHSQHTPYLGHSHAQHAHPPHPPLPPPHPGHPQHPQHHHGPPPPPSTSASTKPKHSGISTIV
SIO_010081: IQSEC1
subclass of: SO_0000673
so part of: IQSEC1
location: complement(join(3265011..3265607,3266989..3267038,3274285..3274461,3275166..3275327,3278576..3278675,3280091..3280216,3281330..3281359,3282871..3283010,3286834..3287000,3287763..3287885,3291891..3292052,3309984..3311248,3314864..3315143,3416933..3416977,3519533..3519562,3589635..3589900))
location: region:3265011-3589900:-1
so has part: feature:3589635-3589900:-1:exon
so has part: feature:3519533-3519562:-1:exon
so has part: feature:3416933-3416977:-1:exon
so has part: feature:3314864-3315143:-1:exon
so has part: feature:3309984-3311248:-1:exon
so has part: feature:3291891-3292052:-1:exon
so has part: feature:3287763-3287885:-1:exon
so has part: feature:3286834-3287000:-1:exon
so has part: feature:3282871-3283010:-1:exon
so has part: feature:3281330-3281359:-1:exon
so has part: feature:3280091-3280216:-1:exon
so has part: feature:3278576-3278675:-1:exon
so has part: feature:3275166-3275327:-1:exon
so has part: feature:3274285-3274461:-1:exon
so has part: feature:3266989-3267038:-1:exon
so has part: feature:3265011-3265607:-1:exon

XP_030314065.1
type: Protein
SIO_000068: ncbiprotein

position:3265011:-1
position: 3265011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3589900:-1
position: 3589900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3589635-3589900:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3519533-3519562:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3416933-3416977:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3314864-3315143:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3309984-3311248:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3291891-3292052:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3287763-3287885:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3286834-3287000:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3282871-3283010:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3281330-3281359:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3280091-3280216:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3278576-3278675:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3275166-3275327:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3274285-3274461:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3266989-3267038:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3265011-3265607:-1:exon

IQSEC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: IQSEC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IQ motif and SEC7 domain-containing protein 1 isoform X1
translation: MESPAENPSKAAEYLKELNKIIETQQELLEKQKRRIDELEQQVAKLYHENACLQDEHHRHLATCRLQQSVPPAYPGVLSAIQENAKHEKSEGESSRSLRSLNTLHQFCCPAPLYHTQLAVPATHSEYRASLETGSSVSTDPLSVEGEAPSSETGTSLDSPSAYHQGPITHSAALSPEHYEHSAYGLYSVSPGQRARRPKLQHSTSILRKQAEEEAIKRSRSLSESYELSSDLQDKQVEMLERKYGGRLITRHAARTIQTAFRQYQMNKNFERLRSSMSENRMSRRIVLSNMRMQFSFEGPEKVHSSYFEGKQVSVTNDGSKLGSLVPSECGELGEPATMKSPAASTDFSDAITELEDAFSRQVKSLAESIDDALNCRSLHSDEVQTPDQVRSREMERDSCPPTKPAIHNVDHRKLDEMTASYSDVTLYIDEEELSPPLPLSQSVDRPSSTESDLRLRSVNSSQEYWSMTHKDDKIDTDTSCRSTPSLECQEQRMRMDHLPLLTIEPPSDSSVDLSDRSDRGSLKRQNAYDRGITSQQGSPKHIPHSIPAKIISREEQEARHRARPIDSHLAINGTANRQSKSESDYSDGDNDSINSTSNSNDTINCSSESSSRDSLREQTLSKQTYHKETRNSWDSPAFSNDVIRKRHYRIGLNLFNKKPEKGVQYLIERGFVPDTPVGVAHFLLQRKGLSRQMIGEFLGNRQKQFNRDVLDCVVDEMDFSTMELDEALRKFQAHIRVQGEAQKVERLIEAFSQRYCICNPGVVRQFRNPDTIFILAFAIILLNTDMYSPNVKPERKMKLEDFVKNLRGVDDGEDIPREMLIGIYERIRKRELKTNEDHVSQVQKVEKLIVGKKPIGSLHHGLGCVLSLPHRRLVCYCRLFEVPDPNKPQKLGLHQREIFLFNDLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVLLFENQYYPNGIRLTSAVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEVQEMEKHRIESELEKQKGVVRPSMSQCSSLKKDSGNGTLNRACLDDSYATGEGLKRSALSSSLRDLSEAGKRGRRSSAGSLDSNMEGSIISSPHMRRRATSTRECPSRPHQTMPNSSSLLGSLFGSKRGKPPSQGHPPSGSSQQPPHPPVVPHQQHSQHPSAMHHAGTAEGQTQAQVHSHHSQYCHMQQNPPPYHHHHHYHPPQHIQHPHQYHQHVPHSQHAAHSQHTPYLGHSHAQHAHPPHPPLPPPHPGHPQHPQHHHGPPPPPSTSASTKPKHSGISTIV
SIO_010081: IQSEC1
subclass of: SO_0000673
so part of: IQSEC1
location: complement(join(3265011..3265607,3266989..3267038,3274285..3274461,3275166..3275327,3278576..3278675,3280091..3280216,3281330..3281359,3282871..3283010,3286834..3287000,3287763..3287885,3291891..3292052,3309984..3311248,3314864..3315143,3416933..3416977,3440057..3440143,3519533..3519562,3589635..3589900))
location: region:3265011-3589900:-1
so has part: feature:3589635-3589900:-1:exon
so has part: feature:3519533-3519562:-1:exon
so has part: feature:3440057-3440143:-1:exon
so has part: feature:3416933-3416977:-1:exon
so has part: feature:3314864-3315143:-1:exon
so has part: feature:3309984-3311248:-1:exon
so has part: feature:3291891-3292052:-1:exon
so has part: feature:3287763-3287885:-1:exon
so has part: feature:3286834-3287000:-1:exon
so has part: feature:3282871-3283010:-1:exon
so has part: feature:3281330-3281359:-1:exon
so has part: feature:3280091-3280216:-1:exon
so has part: feature:3278576-3278675:-1:exon
so has part: feature:3275166-3275327:-1:exon
so has part: feature:3274285-3274461:-1:exon
so has part: feature:3266989-3267038:-1:exon
so has part: feature:3265011-3265607:-1:exon

XP_008497157.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3589635-3589900:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3519533-3519562:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3440057-3440143:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3416933-3416977:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3314864-3315143:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3309984-3311248:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3291891-3292052:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3287763-3287885:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3286834-3287000:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3282871-3283010:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3281330-3281359:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3280091-3280216:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3278576-3278675:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3275166-3275327:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3274285-3274461:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3266989-3267038:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3265011-3265607:-1:exon

IQSEC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: IQSEC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IQ motif and SEC7 domain-containing protein 1 isoform X3
translation: MWCLHCSSERTQSLLELELDSCVEGEAPSSETGTSLDSPSAYHQGPITHSAALSPEHYEHSAYGLYSVSPGQRARRPKLQHSTSILRKQAEEEAIKRSRSLSESYELSSDLQDKQVEMLERKYGGRLITRHAARTIQTAFRQYQMNKNFERLRSSMSENRMSRRIVLSNMRMQFSFEGPEKVHSSYFEGKQVSVTNDGSKLGSLVPSECGELGEPATMKSPAASTDFSDAITELEDAFSRQVKSLAESIDDALNCRSLHSDEVQTPDQVRSREMERDSCPPTKPAIHNVDHRKLDEMTASYSDVTLYIDEEELSPPLPLSQSVDRPSSTESDLRLRSVNSSQEYWSMTHKDDKIDTDTSCRSTPSLECQEQRMRMDHLPLLTIEPPSDSSVDLSDRSDRGSLKRQNAYDRGITSQQGSPKHIPHSIPAKIISREEQEARHRARPIDSHLAINGTANRQSKSESDYSDGDNDSINSTSNSNDTINCSSESSSRDSLREQTLSKQTYHKETRNSWDSPAFSNDVIRKRHYRIGLNLFNKKPEKGVQYLIERGFVPDTPVGVAHFLLQRKGLSRQMIGEFLGNRQKQFNRDVLDCVVDEMDFSTMELDEALRKFQAHIRVQGEAQKVERLIEAFSQRYCICNPGVVRQFRNPDTIFILAFAIILLNTDMYSPNVKPERKMKLEDFVKNLRGVDDGEDIPREMLIGIYERIRKRELKTNEDHVSQVQKVEKLIVGKKPIGSLHHGLGCVLSLPHRRLVCYCRLFEVPDPNKPQKLGLHQREIFLFNDLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVLLFENQYYPNGIRLTSAVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEVQEMEKHRIESELEKQKGVVRPSMSQCSSLKKDSGNGTLNRACLDDSYATGEGLKRSALSSSLRDLSEAGKRGRRSSAGSLDSNMEGSIISSPHMRRRATSTRECPSRPHQTMPNSSSLLGSLFGSKRGKPPSQGHPPSGSSQQPPHPPVVPHQQHSQHPSAMHHAGTAEGQTQAQVHSHHSQYCHMQQNPPPYHHHHHYHPPQHIQHPHQYHQHVPHSQHAAHSQHTPYLGHSHAQHAHPPHPPLPPPHPGHPQHPQHHHGPPPPPSTSASTKPKHSGISTIV
SIO_010081: IQSEC1
subclass of: SO_0000673
so part of: IQSEC1
location: complement(join(3265011..3265607,3266989..3267038,3274285..3274461,3275166..3275327,3278576..3278675,3280091..3280216,3281330..3281359,3282871..3283010,3286834..3287000,3287763..3287885,3291891..3292052,3309984..3311248,3314864..3315143,3331566..3331630))
location: region:3265011-3331630:-1
so has part: feature:3331566-3331630:-1:exon
so has part: feature:3314864-3315143:-1:exon
so has part: feature:3309984-3311248:-1:exon
so has part: feature:3291891-3292052:-1:exon
so has part: feature:3287763-3287885:-1:exon
so has part: feature:3286834-3287000:-1:exon
so has part: feature:3282871-3283010:-1:exon
so has part: feature:3281330-3281359:-1:exon
so has part: feature:3280091-3280216:-1:exon
so has part: feature:3278576-3278675:-1:exon
so has part: feature:3275166-3275327:-1:exon
so has part: feature:3274285-3274461:-1:exon
so has part: feature:3266989-3267038:-1:exon
so has part: feature:3265011-3265607:-1:exon

XP_030314066.1
type: Protein
SIO_000068: ncbiprotein

position:3331630:-1
position: 3331630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3331566-3331630:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3314864-3315143:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3309984-3311248:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3291891-3292052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3287763-3287885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3286834-3287000:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3282871-3283010:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3281330-3281359:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3280091-3280216:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3278576-3278675:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3275166-3275327:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3274285-3274461:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3266989-3267038:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3265011-3265607:-1:exon

IQSEC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: IQSEC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IQ motif and SEC7 domain-containing protein 1 isoform X5
translation: MLERKYGGRLITRHAARTIQTAFRQYQMNKNFERLRSSMSENRMSRRIVLSNMRMQFSFEGPEKVHSSYFEGKQVSVTNDGSKLGSLVPSECGELGEPATMKSPAASTDFSDAITELEDAFSRQVKSLAESIDDALNCRSLHSDEVQTPDQVRSREMERDSCPPTKPAIHNVDHRKLDEMTASYSDVTLYIDEEELSPPLPLSQSVDRPSSTESDLRLRSVNSSQEYWSMTHKDDKIDTDTSCRSTPSLECQEQRMRMDHLPLLTIEPPSDSSVDLSDRSDRGSLKRQNAYDRGITSQQGSPKHIPHSIPAKIISREEQEARHRARPIDSHLAINGTANRQSKSESDYSDGDNDSINSTSNSNDTINCSSESSSRDSLREQTLSKQTYHKETRNSWDSPAFSNDVIRKRHYRIGLNLFNKKPEKGVQYLIERGFVPDTPVGVAHFLLQRKGLSRQMIGEFLGNRQKQFNRDVLDCVVDEMDFSTMELDEALRKFQAHIRVQGEAQKVERLIEAFSQRYCICNPGVVRQFRNPDTIFILAFAIILLNTDMYSPNVKPERKMKLEDFVKNLRGVDDGEDIPREMLIGIYERIRKRELKTNEDHVSQVQKVEKLIVGKKPIGSLHHGLGCVLSLPHRRLVCYCRLFEVPDPNKPQKLGLHQREIFLFNDLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVLLFENQYYPNGIRLTSAVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEVQEMEKHRIESELEKQKGVVRPSMSQCSSLKKDSGNGTLNRACLDDSYATGEGLKRSALSSSLRDLSEAGKRGRRSSAGSLDSNMEGSIISSPHMRRRATSTRECPSRPHQTMPNSSSLLGSLFGSKRGKPPSQGHPPSGSSQQPPHPPVVPHQQHSQHPSAMHHAGTAEGQTQAQVHSHHSQYCHMQQNPPPYHHHHHYHPPQHIQHPHQYHQHVPHSQHAAHSQHTPYLGHSHAQHAHPPHPPLPPPHPGHPQHPQHHHGPPPPPSTSASTKPKHSGISTIV
SIO_010081: IQSEC1
subclass of: SO_0000673
so part of: IQSEC1
location: complement(join(3265011..3265607,3266989..3267038,3274285..3274461,3275166..3275327,3278576..3278675,3280091..3280216,3281330..3281359,3282871..3283010,3286834..3287000,3287763..3287885,3291891..3292052,3309984..3311242))
location: region:3265011-3311242:-1
so has part: feature:3309984-3311242:-1:exon
so has part: feature:3291891-3292052:-1:exon
so has part: feature:3287763-3287885:-1:exon
so has part: feature:3286834-3287000:-1:exon
so has part: feature:3282871-3283010:-1:exon
so has part: feature:3281330-3281359:-1:exon
so has part: feature:3280091-3280216:-1:exon
so has part: feature:3278576-3278675:-1:exon
so has part: feature:3275166-3275327:-1:exon
so has part: feature:3274285-3274461:-1:exon
so has part: feature:3266989-3267038:-1:exon
so has part: feature:3265011-3265607:-1:exon

XP_030314068.1
type: Protein
SIO_000068: ncbiprotein

position:3311242:-1
position: 3311242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3309984-3311242:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3291891-3292052:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3287763-3287885:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3286834-3287000:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3282871-3283010:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3281330-3281359:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3280091-3280216:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3278576-3278675:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3275166-3275327:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3274285-3274461:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3266989-3267038:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3265011-3265607:-1:exon

IQSEC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: IQSEC1
product: IQ motif and Sec7 domain 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030458207.1
SIO_010081: IQSEC1
subclass of: SO_0000673
so part of: IQSEC1
location: complement(join(3265501..3265607,3274285..3274461,3275166..3275327,3278576..3278675,3280091..3280216,3281330..3281359,3282871..3283010,3286834..3287000,3287763..3287885,3291891..3292052,3309984..3311248,3314864..3315143,3416933..3416977,3440057..3440143,3519533..3519562,3589635..3589900))
location: region:3265501-3589900:-1
so has part: feature:3589635-3589900:-1:exon
so has part: feature:3519533-3519562:-1:exon
so has part: feature:3440057-3440143:-1:exon
so has part: feature:3416933-3416977:-1:exon
so has part: feature:3314864-3315143:-1:exon
so has part: feature:3309984-3311248:-1:exon
so has part: feature:3291891-3292052:-1:exon
so has part: feature:3287763-3287885:-1:exon
so has part: feature:3286834-3287000:-1:exon
so has part: feature:3282871-3283010:-1:exon
so has part: feature:3281330-3281359:-1:exon
so has part: feature:3280091-3280216:-1:exon
so has part: feature:3278576-3278675:-1:exon
so has part: feature:3275166-3275327:-1:exon
so has part: feature:3274285-3274461:-1:exon
so has part: feature:3265501-3265607:-1:exon

position:3265501:-1
position: 3265501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3589635-3589900:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3519533-3519562:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3440057-3440143:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3416933-3416977:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3314864-3315143:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3309984-3311248:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3291891-3292052:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3287763-3287885:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3286834-3287000:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3282871-3283010:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3281330-3281359:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3280091-3280216:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3278576-3278675:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3275166-3275327:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3274285-3274461:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3265501-3265607:-1:exon

IQSEC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: IQSEC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IQ motif and SEC7 domain-containing protein 1 isoform X4
translation: MESPAENPSKAAEYLKELNKIIETQQELLEKQKRRIDELEQQVAKLYHENACLQDEHHRHLATCRLQQSVPPAYPGVLSAIQENAKHEKSEGESSRSLRSLNTLHQFCCPAPLYHTQLAVPATHSEYRASLETGSSVSTDPLSVEGEAPSSETGTSLDSPSAYHQGPITHSAALSPEHYEHSAYGLYSVSPGQRARRPKLQHSTSILRKQAEEEAIKRSRSLSESYELSSDLQDKQVEMLERKYGGRLITRHAARTIQTAFRQYQMNKNFERLRSSMSENRMSRRIVLSNMRMQFSFEGPEKVHSSYFEGKQVSVTNDGSKLGSLVPSECGELGEPATMKSPAASTDFSDAITELEDAFSRQVKSLAESIDDALNCRSLHSDEVQTPDQVRSREMERDSCPPTKPAIHNVDHRKLDEMTASYSDVTLYIDEEELSPPLPLSQSVDRPSSTESDLRLRSVNSSQEYWSMTHKDDKIDTDTSCRSTPSLECQEQRMRMDHLPLLTIEPPSDSSVDLSDRSDRGSLKRQNAYDRGITSQQGSPKHIPHSIPAKIISREEQEARHRARPIDSHLAINGTANRQSKSESDYSDGDNDSINSTSNSNDTINCSSESSSRDSLREQTLSKQTYHKETRNSWDSPAFSNDVIRKRHYRIGLNLFNKKPEKGVQYLIERGFVPDTPVGVAHFLLQRKGLSRQMIGEFLGNRQKQFNRDVLDCVVDEMDFSTMELDEALRKFQAHIRVQGEAQKVERLIEAFSQRYCICNPGVVRQFRNPDTIFILAFAIILLNTDMYSPNVKPERKMKLEDFVKNLRGVDDGEDIPREMLIGIYERIRKRELKTNEDHVSQVQKVEKLIVGKKPIGSLHHGLGCVLSLPHRRLVCYCRLFEVPDPNKPQKLGLHQREIFLFNDLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVLLFENQYYPNGIRLTSAVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEVQEMEKHRIESELEKQKGVVRPSMSQCSSLKKDSGNGTLNRACLDDSYATGEGLKRSALSSSLRDLSEAGVHH
SIO_010081: IQSEC1
subclass of: SO_0000673
so part of: IQSEC1
location: complement(join(3265594..3265607,3274285..3274461,3275166..3275327,3278576..3278675,3280091..3280216,3281330..3281359,3282871..3283010,3286834..3287000,3287763..3287885,3291891..3292052,3309984..3311248,3314864..3315143,3416933..3416977,3440057..3440143,3519533..3519562,3589635..3589900))
location: region:3265594-3589900:-1
so has part: feature:3589635-3589900:-1:exon
so has part: feature:3519533-3519562:-1:exon
so has part: feature:3440057-3440143:-1:exon
so has part: feature:3416933-3416977:-1:exon
so has part: feature:3314864-3315143:-1:exon
so has part: feature:3309984-3311248:-1:exon
so has part: feature:3291891-3292052:-1:exon
so has part: feature:3287763-3287885:-1:exon
so has part: feature:3286834-3287000:-1:exon
so has part: feature:3282871-3283010:-1:exon
so has part: feature:3281330-3281359:-1:exon
so has part: feature:3280091-3280216:-1:exon
so has part: feature:3278576-3278675:-1:exon
so has part: feature:3275166-3275327:-1:exon
so has part: feature:3274285-3274461:-1:exon
so has part: feature:3265594-3265607:-1:exon