Calypte anna isolate BGI_N300 chromosome 9, bCalAnn1_v1.p, whole genome shotgun sequence.
type: Entry
definition: Calypte anna isolate BGI_N300 chromosome 9, bCalAnn1_v1.p, whole genome shotgun sequence.
sequence version: NC_044255.1
sequence date: 2019-08-24
sequence: sequence
division: CON
label: NC_044255.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA558503
dblink: SAMN02265252
keyword: WGS
keyword: RefSeq
source: Calypte anna (Anna's hummingbird)
organism: Calypte anna
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Apodiformes; Trochilidae; Calypte.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM012122.1.\nAssembly name: bCalAnn1_v1.p\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2019/05/16. The original whole-genome shotgun project has the\naccession RRCD00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 26-SEP-2018\nAssembly Method :: FALCON v. 5.1.1; FALCON unzip v. 1.0.2;\n scaff10X v. git 4.28.2018; Bionano Solve\n DLS v. 3.2.1; Salsa2 HiC v. 2.0;\n smrtanalysis Arrow polishing & gap\n filling v. 5.1.0.26412; longranger align\n v. 2.2.2; freebayes v. 1.2.0;\n purge_haplotigs v. bit 7.10.2018; gEVAL\n manual curation v. 2018-09-07\nAssembly Name :: bCalAnn1_v1.p\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 54.0x\nSequencing Technology :: PacBio RSII; 10X Genomics linked reads;\n Bionano Genomics DLS; Arima Genomics HiC\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Calypte anna Annotation Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 25686456
topology: linear
so has quality: SO_0000987
location: 1..25686456
location: region:1-25686456:1
RO_0002162: 9244

NC_044255
type: RefSeq
SIO_000068: refseq

PRJNA558503
type: BioProject
SIO_000068: bioproject

SAMN02265252
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25686456:1
position: 25686456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-25686456:1:source
so part of: sequence
organism: Calypte anna
mol type: genomic DNA
isolate: BGI_N300
chromosome: 9
sex: female
country: USA

9244
type: Taxonomy
SIO_000068: taxonomy

LOC115598756
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115598756
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2371..5590)
location: region:2371-5590:-1
so has part: feature:2371-5590:-1:exon
subclass of: SO_0000010

115598756
type: Gene
SIO_000068: ncbigene

position:2371:-1
position: 2371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5590:-1
position: 5590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2371-5590:-1:exon

LOC115598756
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC115598756
product: uncharacterized LOC115598756
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 54% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030456246.1
SIO_010081: LOC115598756
subclass of: SO_0000673
so part of: LOC115598756
location: complement(join(2371..2602,2677..2732,2821..2886,3114..3172,4474..4529,5002..5042,5257..5319,5411..5465,5542..5590))
location: region:2371-5590:-1
so has part: feature:5542-5590:-1:exon
so has part: feature:5411-5465:-1:exon
so has part: feature:5257-5319:-1:exon
so has part: feature:5002-5042:-1:exon
so has part: feature:4474-4529:-1:exon
so has part: feature:3114-3172:-1:exon
so has part: feature:2821-2886:-1:exon
so has part: feature:2677-2732:-1:exon
so has part: feature:2371-2602:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5542-5590:-1:exon

position:5542:-1
position: 5542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5411-5465:-1:exon

position:5411:-1
position: 5411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5465:-1
position: 5465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5257-5319:-1:exon

position:5257:-1
position: 5257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5319:-1
position: 5319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5002-5042:-1:exon

position:5002:-1
position: 5002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5042:-1
position: 5042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4474-4529:-1:exon

position:4474:-1
position: 4474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4529:-1
position: 4529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3114-3172:-1:exon

position:3114:-1
position: 3114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3172:-1
position: 3172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2821-2886:-1:exon

position:2821:-1
position: 2821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2886:-1
position: 2886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2677-2732:-1:exon

position:2677:-1
position: 2677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2732:-1
position: 2732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2371-2602:-1:exon

position:2602:-1
position: 2602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115598756
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC115598756
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115598756
translation: MNRKKPTEEERKPPPKEGGSGERSGIRTPQVAVAKCPPNLILAPQRDGRHMCERLRCCACHFWNQMSIEGATHCLGATKPCAEEQLGKIPCDKDVDERAGGEKSAIQRCPPNLLLAPHKDGRQQMGERLRCHNHPWRDKDTHLGAVGEGAVRATFGTGSALKLSRVGGEGFMGLVTSDQQNRNSFSWCFRCPKQWWQWRSTLEREGAWYTTGLP
SIO_010081: LOC115598756
subclass of: SO_0000673
so part of: LOC115598756
location: complement(join(2403..2602,2677..2732,2821..2886,3114..3172,4474..4529,5002..5042,5257..5319,5411..5465,5542..5590))
location: region:2403-5590:-1
so has part: feature:5542-5590:-1:exon
so has part: feature:5411-5465:-1:exon
so has part: feature:5257-5319:-1:exon
so has part: feature:5002-5042:-1:exon
so has part: feature:4474-4529:-1:exon
so has part: feature:3114-3172:-1:exon
so has part: feature:2821-2886:-1:exon
so has part: feature:2677-2732:-1:exon
so has part: feature:2403-2602:-1:exon

XP_030312106.1
type: Protein
SIO_000068: ncbiprotein

position:2403:-1
position: 2403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5542-5590:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5411-5465:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5257-5319:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5002-5042:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4474-4529:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3114-3172:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2821-2886:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2677-2732:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2403-2602:-1:exon

SPHKAP
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SPHKAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 138577..201971
location: region:138577-201971:1
so has part: feature:138577-201971:1:exon
subclass of: SO_0000010

103527311
type: Gene
SIO_000068: ncbigene

position:138577:1
position: 138577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201971:1
position: 201971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138577-201971:1:exon

SPHKAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SPHKAP
product: SPHK1 interactor, AKAP domain containing
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030456209.1
SIO_010081: SPHKAP
subclass of: SO_0000673
so part of: SPHKAP
location: join(138577..138608,154574..154676,161238..161348,181564..181623,184554..184688,187538..187793,188054..191792,194759..194938,196743..196829,198823..198875,198960..199144,201828..201971)
location: region:138577-201971:1
so has part: feature:138577-138608:1:exon
so has part: feature:154574-154676:1:exon
so has part: feature:161238-161348:1:exon
so has part: feature:181564-181623:1:exon
so has part: feature:184554-184688:1:exon
so has part: feature:187538-187793:1:exon
so has part: feature:188054-191792:1:exon
so has part: feature:194759-194938:1:exon
so has part: feature:196743-196829:1:exon
so has part: feature:198823-198875:1:exon
so has part: feature:198960-199144:1:exon
so has part: feature:201828-201971:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:138577-138608:1:exon

position:138608:1
position: 138608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:154574-154676:1:exon

position:154574:1
position: 154574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154676:1
position: 154676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:161238-161348:1:exon

position:161238:1
position: 161238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161348:1
position: 161348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:181564-181623:1:exon

position:181564:1
position: 181564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181623:1
position: 181623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:184554-184688:1:exon

position:184554:1
position: 184554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184688:1
position: 184688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:187538-187793:1:exon

position:187538:1
position: 187538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187793:1
position: 187793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:188054-191792:1:exon

position:188054:1
position: 188054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191792:1
position: 191792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:194759-194938:1:exon

position:194759:1
position: 194759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194938:1
position: 194938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:196743-196829:1:exon

position:196743:1
position: 196743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196829:1
position: 196829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:198823-198875:1:exon

position:198823:1
position: 198823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198875:1
position: 198875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:198960-199144:1:exon

position:198960:1
position: 198960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199144:1
position: 199144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:201828-201971:1:exon

position:201828:1
position: 201828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPHKAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SPHKAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: A-kinase anchor protein SPHKAP
translation: MSGRPPPAAASNFESPLMQEVPEHQSGSTDSSASSLGSSVTACKKILCSNSLLESTDYWLQNQRTPCQIGFLEDKSESNCASVCFVNLDANSDDCSDEQVKQRLISVSPNLPKLISSINVQPPKENEIVLLSGLASGNLQAEYEVPQCPWLADVCLVQCARGDRKNSASCIIFEINKFLIGLELVQERQLQIEAHVLKPEDDTNCSVSSIEEDFLTASEHLEDDNEAEEYKTGHDKLSVSEASSDAKKNKGKGFENLHYRKSRLPIIHEGNCINEDNAATRTSEAVNAVAEDGTLQPADMSDQEILMQKNLDERATSSLITTNLMSEVENSCSAHVLEDVSLTEMAKEELVPLCVQEPAKHSSKADGEDSAGVGQTDLPVQNEQATTGEYATNLAESVLQDAFIRLSQSQPTFSEEAAVSISVGSSSKSEDGSAPRSWNELPKIVIVQSPDSSENVADWPGSAFPNLCHWTESESSAEVSDYLEEEHSNGHGQSALEVALACAATVIGTISSPQAAEKFRRDQEATDSKSGGVGREELHPESSQVMDGSADTEYSFPSALCGMTQVASAVAICGLGDTKEEKYPAASSGLLSAAQTSAAITLHCSIAIGSSMEKLNHSIAEALLKEASIILTKPNTYKNVGHFMESINGKIIETTARPQVPQTKEVIRDELAQNLSNIILRHSIEEVRKRRLLHPHAEHSSTAKDIFTETANELLFNIIYFTCKKMNDIRQVEECSPLFSEDTKADQVTREATQAAAYETPRNPLDHFAVKPFSTPYSSSGGEDLGSDTNTEKCIVKDANSKTSATLNSEPTSRSTGPNTLATKTSPKKRYLKRTARDCYKFPNQSNNPHQKKDCRSFSDRENTFANNECRHSVQEQLSSSATMNAEDEVKPKSDTVLNNDVQVSLSLLGNHVLLPSQPVLQVKHSRGKYCITDYAEELAETVVSMATEIAAICLENSNGKQPWFCAWKRGNEYLVTQSLSCRSMKRKKETHANGSVVRKHRAPRLSEIKRKTDEHPELKERLMNRVVDESINLEDTPDSVNIFANEVAAKIMNLTELSMVDGIWQGPNHPRTRLHCERWSRAKASSCESIPEEDLDSKASFNTLGLMNTFGQSLSQTSSVSKQSSCESITDEFSRFMVNQMENEGRGFDLLLDYYAGKNANNILTSALQQVAKKNGHLNVRPSCPSKQSSTESITEEFYRYMLREIEKENKENLSSPLNSKDWCGSLLPPSLRSPFCFRQSSVPDSRSSGSRLTVSVPVKANSLDGFAHHHQDSLSLQPGNTVASSGLCKSDSCLYQRCKTDQITDMLIHETWASSIKSLMCKNKIIADEEEAAELDQFPSDSSPQVEQYANRLAANIVATGKNLIGAQQDSCDYTSQEHMLESKHPQSAAPSRSKLKRDAIHLDEKKERIKSPGCLPAGQHREVPLIQIETDQRDEPDKASESSASWHPARKEDQSKEKPIEALDEKDTGSSSLINSNSPQSRTDAEILGETKTAEEFPNHLSSSEESTGSWSQLANDEDNPDDTSSYLQLSERSLSNGNSSTTSSLGIMDLEIYQENVPSSLMTNELVEEKVFLKEQTENTEESTCGLSVGTANCQKDLLVINFDLEPECPDVELRATLQWIAASELGIPTIYFKKSQENRIEKFLDVVQLVQRKCWKVGDIFHAVVQYCKLSEEGREMPPSLFDWLLELG
SIO_010081: SPHKAP
subclass of: SO_0000673
so part of: SPHKAP
location: join(138577..138608,154574..154676,161238..161348,181564..181623,184554..184688,187538..187793,188054..191792,194759..194938,196743..196829,198823..198875,198960..199144,201828..201971)
location: region:138577-201971:1
so has part: feature:138577-138608:1:exon
so has part: feature:154574-154676:1:exon
so has part: feature:161238-161348:1:exon
so has part: feature:181564-181623:1:exon
so has part: feature:184554-184688:1:exon
so has part: feature:187538-187793:1:exon
so has part: feature:188054-191792:1:exon
so has part: feature:194759-194938:1:exon
so has part: feature:196743-196829:1:exon
so has part: feature:198823-198875:1:exon
so has part: feature:198960-199144:1:exon
so has part: feature:201828-201971:1:exon

XP_030312069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:138577-138608:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:154574-154676:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:161238-161348:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:181564-181623:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:184554-184688:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:187538-187793:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:188054-191792:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:194759-194938:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:196743-196829:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:198823-198875:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:198960-199144:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:201828-201971:1:exon

DAW1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: DAW1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(206938..223834)
location: region:206938-223834:-1
so has part: feature:206938-223834:-1:exon
subclass of: SO_0000010

103527317
type: Gene
SIO_000068: ncbigene

position:206938:-1
position: 206938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223834:-1
position: 223834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206938-223834:-1:exon

DAW1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: DAW1
product: dynein assembly factor with WD repeats 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 26% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030456290.1
SIO_010081: DAW1
subclass of: SO_0000673
so part of: DAW1
location: complement(join(206938..206975,207603..207765,210409..210485,211002..211116,211517..211619,214594..214700,215717..215824,217607..217706,218202..218324,218956..219014,221423..221567,222468..222540,223795..223834))
location: region:206938-223834:-1
so has part: feature:223795-223834:-1:exon
so has part: feature:222468-222540:-1:exon
so has part: feature:221423-221567:-1:exon
so has part: feature:218956-219014:-1:exon
so has part: feature:218202-218324:-1:exon
so has part: feature:217607-217706:-1:exon
so has part: feature:215717-215824:-1:exon
so has part: feature:214594-214700:-1:exon
so has part: feature:211517-211619:-1:exon
so has part: feature:211002-211116:-1:exon
so has part: feature:210409-210485:-1:exon
so has part: feature:207603-207765:-1:exon
so has part: feature:206938-206975:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:223795-223834:-1:exon

position:223795:-1
position: 223795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:222468-222540:-1:exon

position:222468:-1
position: 222468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222540:-1
position: 222540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:221423-221567:-1:exon

position:221423:-1
position: 221423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221567:-1
position: 221567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:218956-219014:-1:exon

position:218956:-1
position: 218956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219014:-1
position: 219014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:218202-218324:-1:exon

position:218202:-1
position: 218202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218324:-1
position: 218324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:217607-217706:-1:exon

position:217607:-1
position: 217607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217706:-1
position: 217706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:215717-215824:-1:exon

position:215717:-1
position: 215717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215824:-1
position: 215824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:214594-214700:-1:exon

position:214594:-1
position: 214594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214700:-1
position: 214700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:211517-211619:-1:exon

position:211517:-1
position: 211517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211619:-1
position: 211619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:211002-211116:-1:exon

position:211002:-1
position: 211002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211116:-1
position: 211116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:210409-210485:-1:exon

position:210409:-1
position: 210409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210485:-1
position: 210485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:207603-207765:-1:exon

position:207603:-1
position: 207603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207765:-1
position: 207765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:206938-206975:-1:exon

position:206975:-1
position: 206975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DAW1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: DAW1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein assembly factor with WDR repeat domains 1
translation: MKLKRLLLRYYPPGIILEYVQDGETKTRSIDLLDLRPDTDATALVEEIQNAEPLITDSCKEHVIRLVQRLQEKLEEKEDHKFKLFKVLRAHTLPLTNVAFNKSGSRFITGSYDRTCKVWDTLSGEELHTLEGHGNVVYAIAFNNPYGDKIATGSFDKTCKMWSTETGKCYHTFRGHRAEIVCLSFNLQSTLLATGSMDTTAKLWDIEKGEEIITLSGHSAEIVALSFNTTGDRIITGSFDHTVVVWDVGTGRKLHILIGHRGEISSAHFNWDSSLIITGSMDKTCMLWNAIAGTHIATFTGHSDEILDVCFDYAGQNIATASADGSARVYNVETKKCIAKLEGHGCEISKVVFNPKGNRILTASSDKTARLWDAATGYCFQILEGHTDEIFSCAFNYKGDTIITGSKDNTCRIWHD
SIO_010081: DAW1
subclass of: SO_0000673
so part of: DAW1
location: complement(join(206938..206975,207603..207765,210409..210485,211002..211116,211517..211619,214594..214700,215717..215824,217607..217706,218202..218324,218956..219014,221423..221567,222468..222540,223795..223834))
location: region:206938-223834:-1
so has part: feature:223795-223834:-1:exon
so has part: feature:222468-222540:-1:exon
so has part: feature:221423-221567:-1:exon
so has part: feature:218956-219014:-1:exon
so has part: feature:218202-218324:-1:exon
so has part: feature:217607-217706:-1:exon
so has part: feature:215717-215824:-1:exon
so has part: feature:214594-214700:-1:exon
so has part: feature:211517-211619:-1:exon
so has part: feature:211002-211116:-1:exon
so has part: feature:210409-210485:-1:exon
so has part: feature:207603-207765:-1:exon
so has part: feature:206938-206975:-1:exon

XP_030312150.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:223795-223834:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:222468-222540:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:221423-221567:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:218956-219014:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:218202-218324:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:217607-217706:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:215717-215824:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:214594-214700:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:211517-211619:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:211002-211116:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:210409-210485:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:207603-207765:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:206938-206975:-1:exon

CCL20
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: CCL20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(234748..236780)
location: region:234748-236780:-1
so has part: feature:234748-236780:-1:exon
subclass of: SO_0000010

103527319
type: Gene
SIO_000068: ncbigene

position:234748:-1
position: 234748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236780:-1
position: 236780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234748-236780:-1:exon

CCL20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CCL20
product: C-C motif chemokine ligand 20
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008492493.2
SIO_010081: CCL20
subclass of: SO_0000673
so part of: CCL20
location: complement(join(234748..235232,235506..235583,236339..236453,236702..236780))
location: region:234748-236780:-1
so has part: feature:236702-236780:-1:exon
so has part: feature:236339-236453:-1:exon
so has part: feature:235506-235583:-1:exon
so has part: feature:234748-235232:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:236702-236780:-1:exon

position:236702:-1
position: 236702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:236339-236453:-1:exon

position:236339:-1
position: 236339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236453:-1
position: 236453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:235506-235583:-1:exon

position:235506:-1
position: 235506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235583:-1
position: 235583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:234748-235232:-1:exon

position:235232:-1
position: 235232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCL20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CCL20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-C motif chemokine 20
translation: MAAFGRKSLVLVSLLGLLALLLCSSDAQTNQDCCLSYTKVRLPRWAILGYTEQLSSEVCDIHAIIFHTRSGLKACVNPKEGWVKKHLLFLSHKLKKMSA
SIO_010081: CCL20
subclass of: SO_0000673
so part of: CCL20
location: complement(join(235205..235232,235506..235583,236339..236453,236702..236780))
location: region:235205-236780:-1
so has part: feature:236702-236780:-1:exon
so has part: feature:236339-236453:-1:exon
so has part: feature:235506-235583:-1:exon
so has part: feature:235205-235232:-1:exon

XP_008490715.1
type: Protein
SIO_000068: ncbiprotein

position:235205:-1
position: 235205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236702-236780:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:236339-236453:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235506-235583:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:235205-235232:-1:exon

LOC103527320
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103527320
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 252610..257356
location: region:252610-257356:1
so has part: feature:252610-257356:1:exon
subclass of: SO_0000010

103527320
type: Gene
SIO_000068: ncbigene

position:252610:1
position: 252610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257356:1
position: 257356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252610-257356:1:exon

LOC103527320
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103527320
product: thiamine transporter 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 50% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030456292.1
SIO_010081: LOC103527320
subclass of: SO_0000673
so part of: LOC103527320
location: join(252610..252759,253087..253882,255468..255660,255780..255921,257165..257356)
location: region:252610-257356:1
so has part: feature:252610-252759:1:exon
so has part: feature:253087-253882:1:exon
so has part: feature:255468-255660:1:exon
so has part: feature:255780-255921:1:exon
so has part: feature:257165-257356:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:252610-252759:1:exon

position:252759:1
position: 252759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:253087-253882:1:exon

position:253087:1
position: 253087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253882:1
position: 253882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:255468-255660:1:exon

position:255468:1
position: 255468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255660:1
position: 255660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:255780-255921:1:exon

position:255780:1
position: 255780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255921:1
position: 255921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:257165-257356:1:exon

position:257165:1
position: 257165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC103527320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103527320
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thiamine transporter 2-like
translation: MGCWKQEKRNTWTFPTLILCLYGFCYMMKPSEPFLTPYLTGPDKNLTIDEVTNQIFPVWTYSYLALLIPVFLITDYVRYKPVLLLQGISFIVTWLLLLFARGVLAMQAVEFFYGMTTATEVAYYAYIYSVVSTERYQRVTSYCRSVTLLAATLAALLGQLLVSLAGVSYFHLNAITLASVSLAFLCSFFLPTPHRTMFFHRKDGPEALPAPQKGLDSLRPEDRDSGSDGQGPAPQQQAEGAQAQSSVLRVLVQLSKDLRDCYSSRKLLYWSLWWALATAGFNQVVNYIQVLWDFRAPSHSSAVYNGAVEAIATFLSSVTSFVVQYMKINWDLFGEMALGIFSAIDAGSLFLMHFTTNTWACYASYLIFKACYMLLITIATFQIAVNLSMERYALMFGFNNFVALVIQTILTVVVVDSKGLGLDIVTQFLIYGSYFAVIAGIFLTRSICMLASSKCPRKIARSCKEHLNHAEDESKEQAVTGSPTWLQESG
SIO_010081: LOC103527320
subclass of: SO_0000673
so part of: LOC103527320
location: join(252610..252759,253087..253882,255468..255660,255780..255921,257165..257356)
location: region:252610-257356:1
so has part: feature:252610-252759:1:exon
so has part: feature:253087-253882:1:exon
so has part: feature:255468-255660:1:exon
so has part: feature:255780-255921:1:exon
so has part: feature:257165-257356:1:exon

XP_030312152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:252610-252759:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:253087-253882:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:255468-255660:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:255780-255921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:257165-257356:1:exon

LOC103527321
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103527321
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 261949..269554
location: region:261949-269554:1
so has part: feature:261949-269554:1:exon
subclass of: SO_0000010

103527321
type: Gene
SIO_000068: ncbigene

position:261949:1
position: 261949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269554:1
position: 269554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261949-269554:1:exon

LOC103527321
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103527321
product: thiamine transporter 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030456058.1
SIO_010081: LOC103527321
subclass of: SO_0000673
so part of: LOC103527321
location: join(261949..261981,262074..262230,263862..264657,266628..266820,267331..267472,268268..269554)
location: region:261949-269554:1
so has part: feature:261949-261981:1:exon
so has part: feature:262074-262230:1:exon
so has part: feature:263862-264657:1:exon
so has part: feature:266628-266820:1:exon
so has part: feature:267331-267472:1:exon
so has part: feature:268268-269554:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:261949-261981:1:exon

position:261981:1
position: 261981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:262074-262230:1:exon

position:262074:1
position: 262074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262230:1
position: 262230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:263862-264657:1:exon

position:263862:1
position: 263862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264657:1
position: 264657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:266628-266820:1:exon

position:266628:1
position: 266628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266820:1
position: 266820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:267331-267472:1:exon

position:267331:1
position: 267331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267472:1
position: 267472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:268268-269554:1:exon

position:268268:1
position: 268268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC103527321
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103527321
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thiamine transporter 2
translation: MDCWKEAMGRSWIYPTLIICINGFFSTMRPSEAFLTPYLTGPDKNLTIEEVTNQIFPVWTYSYLALLIPVFLITDYVRYKPVLLLQGISFIVTWLLLLFARGVLAMQAVEFFYGMTTATEVAYYAYIYSVVSTERYQRVTSYCRSVTLLAATLAALLGQLLVSLAGVSYFHLNAITLASVSLAFLCSFFLPTPHRTMFFHRKDGPEALPAPQKGLDSLRPEDRDSGSDGQGPAPQQQAEGAQAQSSVLRVLVQLSKDLRDCYSSRKLLYWSLWWALATAGFNQVVNYIQVLWDFRAPSHSSAVYNGAVEAIATFVGSATSMAVGYVKVNWDLSGELALGIFSAMDAGSLFLMHFTDNIWACYASYLAFKACYMLLITIATFQIAVNLSMERYALMFGFNNFVALAIQTILTLVVVDSKGLGLDISTQFLIYGSYFTLIAGIFLIRSIYTIISIRCRNTSVVGEGINQ
SIO_010081: LOC103527321
subclass of: SO_0000673
so part of: LOC103527321
location: join(262081..262230,263862..264657,266628..266820,267331..267472,268268..268390)
location: region:262081-268390:1
so has part: feature:262081-262230:1:exon
so has part: feature:263862-264657:1:exon
so has part: feature:266628-266820:1:exon
so has part: feature:267331-267472:1:exon
so has part: feature:268268-268390:1:exon

XP_030311918.1
type: Protein
SIO_000068: ncbiprotein

position:262081:1
position: 262081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268390:1
position: 268390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:262081-262230:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:263862-264657:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:266628-266820:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:267331-267472:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:268268-268390:1:exon

AGFG1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: AGFG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(269636..305867)
location: region:269636-305867:-1
so has part: feature:269636-305867:-1:exon
subclass of: SO_0000010

103527312
type: Gene
SIO_000068: ncbigene

position:269636:-1
position: 269636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305867:-1
position: 305867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269636-305867:-1:exon

AGFG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: AGFG1
product: ArfGAP with FG repeats 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 19 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030456055.1
SIO_010081: AGFG1
subclass of: SO_0000673
so part of: AGFG1
location: complement(join(269636..270378,270737..270822,271452..271610,274824..274916,275184..275263,275967..276150,276944..277153,278791..278907,283839..283995,285009..285171,285680..285795,295659..295752,305630..305867))
location: region:269636-305867:-1
so has part: feature:305630-305867:-1:exon
so has part: feature:295659-295752:-1:exon
so has part: feature:285680-285795:-1:exon
so has part: feature:285009-285171:-1:exon
so has part: feature:283839-283995:-1:exon
so has part: feature:278791-278907:-1:exon
so has part: feature:276944-277153:-1:exon
so has part: feature:275967-276150:-1:exon
so has part: feature:275184-275263:-1:exon
so has part: feature:274824-274916:-1:exon
so has part: feature:271452-271610:-1:exon
so has part: feature:270737-270822:-1:exon
so has part: feature:269636-270378:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:305630-305867:-1:exon

position:305630:-1
position: 305630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:295659-295752:-1:exon

position:295659:-1
position: 295659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295752:-1
position: 295752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:285680-285795:-1:exon

position:285680:-1
position: 285680
reference: sequence
type: ReverseStrandPosition
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urn:…
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urn:…
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urn:…
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position:270378:-1
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AGFG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: AGFG1
product: ArfGAP with FG repeats 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 32 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_030456054.1
SIO_010081: AGFG1
subclass of: SO_0000673
so part of: AGFG1
location: complement(join(269636..270378,270737..270828,271452..271610,274824..274916,275184..275263,275967..276150,276944..277153,278791..278907,283839..283995,285009..285171,285680..285795,295659..295752,305630..305867))
location: region:269636-305867:-1
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urn:…
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SIO_000300: 12
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position:270828:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 13
SIO_000628: feature:269636-270378:-1:exon

AGFG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: AGFG1
product: ArfGAP with FG repeats 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030456057.1
SIO_010081: AGFG1
subclass of: SO_0000673
so part of: AGFG1
location: complement(join(269636..270378,270737..270828,271452..271610,274824..274916,275184..275263,276054..276150,276944..277153,278072..278143,278791..278907,283839..283995,285009..285171,285680..285795,295659..295752,305630..305867))
location: region:269636-305867:-1
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urn:…
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reference: sequence
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urn:…
SIO_000300: 8
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SIO_000300: 9
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position:276054:-1
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reference: sequence
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urn:…
SIO_000300: 10
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SIO_000628: feature:269636-270378:-1:exon

AGFG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: AGFG1
product: ArfGAP with FG repeats 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030456052.1
SIO_010081: AGFG1
subclass of: SO_0000673
so part of: AGFG1
location: complement(join(269636..270378,270737..270828,271452..271607,274824..274916,275184..275263,275967..276150,276944..277153,278072..278143,278791..278907,283839..283995,285009..285171,285680..285795,295659..295752,305630..305867))
location: region:269636-305867:-1
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urn:…
SIO_000300: 1
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SIO_000300: 5
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SIO_000300: 10
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SIO_000628: feature:274824-274916:-1:exon

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SIO_000300: 12
SIO_000628: feature:271452-271607:-1:exon

position:271607:-1
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reference: sequence
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urn:…
SIO_000300: 13
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SIO_000300: 14
SIO_000628: feature:269636-270378:-1:exon

AGFG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: AGFG1
product: ArfGAP with FG repeats 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030456056.1
SIO_010081: AGFG1
subclass of: SO_0000673
so part of: AGFG1
location: complement(join(269636..270378,271452..271610,274824..274916,275184..275263,275967..276150,276944..277153,278072..278143,278791..278907,283839..283995,285009..285171,285680..285795,295659..295752,305630..305867))
location: region:269636-305867:-1
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urn:…
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urn:…
SIO_000300: 13
SIO_000628: feature:269636-270378:-1:exon

AGFG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: AGFG1
product: ArfGAP with FG repeats 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030456053.1
SIO_010081: AGFG1
subclass of: SO_0000673
so part of: AGFG1
location: complement(join(269636..270378,270737..270822,271452..271610,274824..274916,275184..275263,275967..276150,276944..277153,278072..278143,278791..278907,283839..283995,285009..285171,285680..285795,295659..295752,305630..305867))
location: region:269636-305867:-1
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urn:…
SIO_000300: 1
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urn:…
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SIO_000628: feature:271452-271610:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:270737-270822:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:269636-270378:-1:exon

AGFG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: AGFG1
product: ArfGAP with FG repeats 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030456051.1
SIO_010081: AGFG1
subclass of: SO_0000673
so part of: AGFG1
location: complement(join(269636..270378,270737..270828,271452..271610,274824..274916,275184..275263,275967..276150,276944..277153,278072..278143,278791..278907,283839..283995,285009..285171,285680..285795,295659..295752,305630..305867))
location: region:269636-305867:-1
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urn:…
SIO_000300: 1
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SIO_000300: 6
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SIO_000628: feature:278072-278143:-1:exon

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SIO_000628: feature:276944-277153:-1:exon

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urn:…
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urn:…
SIO_000300: 13
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urn:…
SIO_000300: 14
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AGFG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: AGFG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arf-GAP domain and FG repeat-containing protein 1 isoform X6
translation: MAASAKRKQEEKHLKLLREMSSLPPNRKCFDCDQRGPTYTDMTVGSFVCTSCSGILRGLNPPHRVKSISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRWYVPPEQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGEAAPSLHLNKGTPSQSPVVVRSQGQQQQEKKQFDLLSDLGSDIFASAPPQSTATANFANFAHFNSHTAQNSANEGFANFDAFGQSSGSSNFGGFPTARQSFQPQNTAFRTLSSSCSFGEFTSAFPLQAVHSGSAGSVNANFAHFDNFPKSSSADFGAFNASQSNPTAAAASKAAVNKPNLQSADKYAALANLDNIFSAGQGGSEQGSGFSTVVSASGGPVLSAPNPSSASSDKYAALAELDSVFSSTATSSNAYTSTSNVSSNAFGTVPVAATAQTQSASSSVPAPFGATPSTNPFVAAPVAPVAPSTNPFQTNSRGATAATFGTASMSMPAGFGTPASYSLPTSYSGNFQQPTFPTQAAFPQQTAFPQQPNGWCTNRTISNRKLINQSFLIAL
SIO_010081: AGFG1
subclass of: SO_0000673
so part of: AGFG1
location: complement(join(270311..270378,271452..271610,274824..274916,275184..275263,275967..276150,276944..277153,278072..278143,278791..278907,283839..283995,285009..285171,285680..285795,295659..295752,305630..305796))
location: region:270311-305796:-1
so has part: feature:305630-305796:-1:exon
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so has part: feature:271452-271610:-1:exon
so has part: feature:270311-270378:-1:exon

XP_030311916.1
type: Protein
SIO_000068: ncbiprotein

position:270311:-1
position: 270311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305796:-1
position: 305796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305630-305796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295659-295752:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:285680-285795:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:285009-285171:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283839-283995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:278791-278907:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:278072-278143:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:276944-277153:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:275967-276150:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:275184-275263:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:274824-274916:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:271452-271610:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:270311-270378:-1:exon

AGFG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: AGFG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arf-GAP domain and FG repeat-containing protein 1 isoform X5
translation: MAASAKRKQEEKHLKLLREMSSLPPNRKCFDCDQRGPTYTDMTVGSFVCTSCSGILRGLNPPHRVKSISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRWYVPPEQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGEAAPSLHLNKGTPSQSPVVVRSQGQQQQEKKQFDLLSDLGSDIFASAPPQSTATANFANFAHFNSHTAQNSANEGFANFDAFGQSSGSSNFGGFPTARQSFQPQNTGGSAGSVNANFAHFDNFPKSSSADFGAFNASQSNPTAAAASKAAVNKPNLQSADKYAALANLDNIFSAGQGGSEQGSGFSTVVSASGGPVLSAPNPSSASSDKYAALAELDSVFSSTATSSNAYTSTSNVSSNAFGTVPVAATAQTQSASSSVPAPFGATPSTNPFVAAPVAPVAPSTNPFQTNSRGATAATFGTASMSMPAGFGTPASYSLPTSYSGNFQQPTFPTQAAFPQQTAFPQQPNGFAAFGQAKPVVTPFGQVAAVGVSSNPFMAGAPTGQFPTGSSSTNPFL
SIO_010081: AGFG1
subclass of: SO_0000673
so part of: AGFG1
location: complement(join(270319..270378,270737..270822,271452..271610,274824..274916,275184..275263,275967..276150,276944..277153,278791..278907,283839..283995,285009..285171,285680..285795,295659..295752,305630..305796))
location: region:270319-305796:-1
so has part: feature:305630-305796:-1:exon
so has part: feature:295659-295752:-1:exon
so has part: feature:285680-285795:-1:exon
so has part: feature:285009-285171:-1:exon
so has part: feature:283839-283995:-1:exon
so has part: feature:278791-278907:-1:exon
so has part: feature:276944-277153:-1:exon
so has part: feature:275967-276150:-1:exon
so has part: feature:275184-275263:-1:exon
so has part: feature:274824-274916:-1:exon
so has part: feature:271452-271610:-1:exon
so has part: feature:270737-270822:-1:exon
so has part: feature:270319-270378:-1:exon

XP_030311915.1
type: Protein
SIO_000068: ncbiprotein

position:270319:-1
position: 270319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305630-305796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295659-295752:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:285680-285795:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:285009-285171:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283839-283995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:278791-278907:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:276944-277153:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:275967-276150:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:275184-275263:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:274824-274916:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:271452-271610:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:270737-270822:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:270319-270378:-1:exon

AGFG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: AGFG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arf-GAP domain and FG repeat-containing protein 1 isoform X4
translation: MAASAKRKQEEKHLKLLREMSSLPPNRKCFDCDQRGPTYTDMTVGSFVCTSCSGILRGLNPPHRVKSISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRWYVPPEQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGEAAPSLHLNKGTPSQSPVVVRSQGQQQQEKKQFDLLSDLGSDIFASAPPQSTATANFANFAHFNSHTAQNSANEGFANFDAFGQSSGSSNFGGFPTARQSFQPQNTGGSAGSVNANFAHFDNFPKSSSADFGAFNASQSNPTAAAASKAAVNKPNLQSADKYAALANLDNIFSAGQGGSEQGSGFSTVVSASGGPVLSAPNPSSASSDKYAALAELDSVFSSTATSSNAYTSTSNVSSNAFGTVPVAATAQTQSASSSVPAPFGATPSTNPFVAAPVAPVAPSTNPFQTNSRGATAATFGTASMSMPAGFGTPASYSLPTSYSGNFQQPTFPTQAAFPQQTAFPQQPNGAGFAAFGQAKPVVTPFGQVAAVGVSSNPFMAGAPTGQFPTGSSSTNPFL
SIO_010081: AGFG1
subclass of: SO_0000673
so part of: AGFG1
location: complement(join(270319..270378,270737..270828,271452..271610,274824..274916,275184..275263,275967..276150,276944..277153,278791..278907,283839..283995,285009..285171,285680..285795,295659..295752,305630..305796))
location: region:270319-305796:-1
so has part: feature:305630-305796:-1:exon
so has part: feature:295659-295752:-1:exon
so has part: feature:285680-285795:-1:exon
so has part: feature:285009-285171:-1:exon
so has part: feature:283839-283995:-1:exon
so has part: feature:278791-278907:-1:exon
so has part: feature:276944-277153:-1:exon
so has part: feature:275967-276150:-1:exon
so has part: feature:275184-275263:-1:exon
so has part: feature:274824-274916:-1:exon
so has part: feature:271452-271610:-1:exon
so has part: feature:270737-270828:-1:exon
so has part: feature:270319-270378:-1:exon

XP_030311914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:305630-305796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295659-295752:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:285680-285795:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:285009-285171:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283839-283995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:278791-278907:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:276944-277153:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:275967-276150:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:275184-275263:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:274824-274916:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:271452-271610:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:270737-270828:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:270319-270378:-1:exon

AGFG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: AGFG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arf-GAP domain and FG repeat-containing protein 1 isoform X7
translation: MAASAKRKQEEKHLKLLREMSSLPPNRKCFDCDQRGPTYTDMTVGSFVCTSCSGILRGLNPPHRVKSISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRWYVPPEQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGEAAPSLHLNKGTPSQSPVVVRSQGQQQQEKKQFDLLSDLGSDIFASAPPQSTATANFANFAHFNSHTAQNSANEGFANFDAFGQSSGSSNFGGFPTARQSFQPQNTAFRTLSSSCSFGEFTSAFPLQAVHSGSAGSVNANFAHFDNFPKSSSADFGAFNASQSNPTAAAASKAAVNKPNLQSADKYAALANLDNIFSAGQGGSEQGSGFSTVVSASGGPVLSAPNPSSASSDNNAFGTVPVAATAQTQSASSSVPAPFGATPSTNPFVAAPVAPVAPSTNPFQTNSRGATAATFGTASMSMPAGFGTPASYSLPTSYSGNFQQPTFPTQAAFPQQTAFPQQPNGAGFAAFGQAKPVVTPFGQVAAVGVSSNPFMAGAPTGQFPTGSSSTNPFL
SIO_010081: AGFG1
subclass of: SO_0000673
so part of: AGFG1
location: complement(join(270319..270378,270737..270828,271452..271610,274824..274916,275184..275263,276054..276150,276944..277153,278072..278143,278791..278907,283839..283995,285009..285171,285680..285795,295659..295752,305630..305796))
location: region:270319-305796:-1
so has part: feature:305630-305796:-1:exon
so has part: feature:295659-295752:-1:exon
so has part: feature:285680-285795:-1:exon
so has part: feature:285009-285171:-1:exon
so has part: feature:283839-283995:-1:exon
so has part: feature:278791-278907:-1:exon
so has part: feature:278072-278143:-1:exon
so has part: feature:276944-277153:-1:exon
so has part: feature:276054-276150:-1:exon
so has part: feature:275184-275263:-1:exon
so has part: feature:274824-274916:-1:exon
so has part: feature:271452-271610:-1:exon
so has part: feature:270737-270828:-1:exon
so has part: feature:270319-270378:-1:exon

XP_030311917.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:305630-305796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295659-295752:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:285680-285795:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:285009-285171:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283839-283995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:278791-278907:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:278072-278143:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:276944-277153:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:276054-276150:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:275184-275263:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:274824-274916:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:271452-271610:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:270737-270828:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:270319-270378:-1:exon

AGFG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: AGFG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arf-GAP domain and FG repeat-containing protein 1 isoform X2
translation: MAASAKRKQEEKHLKLLREMSSLPPNRKCFDCDQRGPTYTDMTVGSFVCTSCSGILRGLNPPHRVKSISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRWYVPPEQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGEAAPSLHLNKGTPSQSPVVVRSQGQQQQEKKQFDLLSDLGSDIFASAPPQSTATANFANFAHFNSHTAQNSANEGFANFDAFGQSSGSSNFGGFPTARQSFQPQNTAFRTLSSSCSFGEFTSAFPLQAVHSGSAGSVNANFAHFDNFPKSSSADFGAFNASQSNPTAAAASKAAVNKPNLQSADKYAALANLDNIFSAGQGGSEQGSGFSTVVSASGGPVLSAPNPSSASSDKYAALAELDSVFSSTATSSNAYTSTSNVSSNAFGTVPVAATAQTQSASSSVPAPFGATPSTNPFVAAPVAPVAPSTNPFQTNSRGATATFGTASMSMPAGFGTPASYSLPTSYSGNFQQPTFPTQAAFPQQTAFPQQPNGAGFAAFGQAKPVVTPFGQVAAVGVSSNPFMAGAPTGQFPTGSSSTNPFL
SIO_010081: AGFG1
subclass of: SO_0000673
so part of: AGFG1
location: complement(join(270319..270378,270737..270828,271452..271607,274824..274916,275184..275263,275967..276150,276944..277153,278072..278143,278791..278907,283839..283995,285009..285171,285680..285795,295659..295752,305630..305796))
location: region:270319-305796:-1
so has part: feature:305630-305796:-1:exon
so has part: feature:295659-295752:-1:exon
so has part: feature:285680-285795:-1:exon
so has part: feature:285009-285171:-1:exon
so has part: feature:283839-283995:-1:exon
so has part: feature:278791-278907:-1:exon
so has part: feature:278072-278143:-1:exon
so has part: feature:276944-277153:-1:exon
so has part: feature:275967-276150:-1:exon
so has part: feature:275184-275263:-1:exon
so has part: feature:274824-274916:-1:exon
so has part: feature:271452-271607:-1:exon
so has part: feature:270737-270828:-1:exon
so has part: feature:270319-270378:-1:exon

XP_030311912.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:305630-305796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295659-295752:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:285680-285795:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:285009-285171:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283839-283995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:278791-278907:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:278072-278143:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:276944-277153:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:275967-276150:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:275184-275263:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:274824-274916:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:271452-271607:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:270737-270828:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:270319-270378:-1:exon

AGFG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: AGFG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arf-GAP domain and FG repeat-containing protein 1 isoform X3
translation: MAASAKRKQEEKHLKLLREMSSLPPNRKCFDCDQRGPTYTDMTVGSFVCTSCSGILRGLNPPHRVKSISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRWYVPPEQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGEAAPSLHLNKGTPSQSPVVVRSQGQQQQEKKQFDLLSDLGSDIFASAPPQSTATANFANFAHFNSHTAQNSANEGFANFDAFGQSSGSSNFGGFPTARQSFQPQNTAFRTLSSSCSFGEFTSAFPLQAVHSGSAGSVNANFAHFDNFPKSSSADFGAFNASQSNPTAAAASKAAVNKPNLQSADKYAALANLDNIFSAGQGGSEQGSGFSTVVSASGGPVLSAPNPSSASSDKYAALAELDSVFSSTATSSNAYTSTSNVSSNAFGTVPVAATAQTQSASSSVPAPFGATPSTNPFVAAPVAPVAPSTNPFQTNSRGATAATFGTASMSMPAGFGTPASYSLPTSYSGNFQQPTFPTQAAFPQQTAFPQQPNGFAAFGQAKPVVTPFGQVAAVGVSSNPFMAGAPTGQFPTGSSSTNPFL
SIO_010081: AGFG1
subclass of: SO_0000673
so part of: AGFG1
location: complement(join(270319..270378,270737..270822,271452..271610,274824..274916,275184..275263,275967..276150,276944..277153,278072..278143,278791..278907,283839..283995,285009..285171,285680..285795,295659..295752,305630..305796))
location: region:270319-305796:-1
so has part: feature:305630-305796:-1:exon
so has part: feature:295659-295752:-1:exon
so has part: feature:285680-285795:-1:exon
so has part: feature:285009-285171:-1:exon
so has part: feature:283839-283995:-1:exon
so has part: feature:278791-278907:-1:exon
so has part: feature:278072-278143:-1:exon
so has part: feature:276944-277153:-1:exon
so has part: feature:275967-276150:-1:exon
so has part: feature:275184-275263:-1:exon
so has part: feature:274824-274916:-1:exon
so has part: feature:271452-271610:-1:exon
so has part: feature:270737-270822:-1:exon
so has part: feature:270319-270378:-1:exon

XP_030311913.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:305630-305796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295659-295752:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:285680-285795:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:285009-285171:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283839-283995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:278791-278907:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:278072-278143:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:276944-277153:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:275967-276150:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:275184-275263:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:274824-274916:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:271452-271610:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:270737-270822:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:270319-270378:-1:exon

AGFG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: AGFG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arf-GAP domain and FG repeat-containing protein 1 isoform X1
translation: MAASAKRKQEEKHLKLLREMSSLPPNRKCFDCDQRGPTYTDMTVGSFVCTSCSGILRGLNPPHRVKSISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRWYVPPEQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGEAAPSLHLNKGTPSQSPVVVRSQGQQQQEKKQFDLLSDLGSDIFASAPPQSTATANFANFAHFNSHTAQNSANEGFANFDAFGQSSGSSNFGGFPTARQSFQPQNTAFRTLSSSCSFGEFTSAFPLQAVHSGSAGSVNANFAHFDNFPKSSSADFGAFNASQSNPTAAAASKAAVNKPNLQSADKYAALANLDNIFSAGQGGSEQGSGFSTVVSASGGPVLSAPNPSSASSDKYAALAELDSVFSSTATSSNAYTSTSNVSSNAFGTVPVAATAQTQSASSSVPAPFGATPSTNPFVAAPVAPVAPSTNPFQTNSRGATAATFGTASMSMPAGFGTPASYSLPTSYSGNFQQPTFPTQAAFPQQTAFPQQPNGAGFAAFGQAKPVVTPFGQVAAVGVSSNPFMAGAPTGQFPTGSSSTNPFL
SIO_010081: AGFG1
subclass of: SO_0000673
so part of: AGFG1
location: complement(join(270319..270378,270737..270828,271452..271610,274824..274916,275184..275263,275967..276150,276944..277153,278072..278143,278791..278907,283839..283995,285009..285171,285680..285795,295659..295752,305630..305796))
location: region:270319-305796:-1
so has part: feature:305630-305796:-1:exon
so has part: feature:295659-295752:-1:exon
so has part: feature:285680-285795:-1:exon
so has part: feature:285009-285171:-1:exon
so has part: feature:283839-283995:-1:exon
so has part: feature:278791-278907:-1:exon
so has part: feature:278072-278143:-1:exon
so has part: feature:276944-277153:-1:exon
so has part: feature:275967-276150:-1:exon
so has part: feature:275184-275263:-1:exon
so has part: feature:274824-274916:-1:exon
so has part: feature:271452-271610:-1:exon
so has part: feature:270737-270828:-1:exon
so has part: feature:270319-270378:-1:exon

XP_030311911.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:305630-305796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295659-295752:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:285680-285795:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:285009-285171:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283839-283995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:278791-278907:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:278072-278143:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:276944-277153:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:275967-276150:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:275184-275263:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:274824-274916:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:271452-271610:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:270737-270828:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:270319-270378:-1:exon

LOC115598772
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115598772
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 306455..310558
location: region:306455-310558:1
so has part: feature:306455-310558:1:exon
subclass of: SO_0000011

115598772
type: Gene
SIO_000068: ncbigene

position:306455:1
position: 306455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310558:1
position: 310558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306455-310558:1:exon

LOC115598772
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115598772
product: uncharacterized LOC115598772
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003987909.1
SIO_010081: LOC115598772
subclass of: SO_0000673
so part of: LOC115598772
location: join(306455..306482,307567..307679,310185..310558)
location: region:306455-310558:1
so has part: feature:306455-306482:1:exon
so has part: feature:307567-307679:1:exon
so has part: feature:310185-310558:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:306455-306482:1:exon

position:306482:1
position: 306482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:307567-307679:1:exon

position:307567:1
position: 307567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307679:1
position: 307679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:310185-310558:1:exon

position:310185:1
position: 310185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MRPL44
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: MRPL44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(321299..325174)
location: region:321299-325174:-1
so has part: feature:321299-325174:-1:exon
subclass of: SO_0000010

103527322
type: Gene
SIO_000068: ncbigene

position:321299:-1
position: 321299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325174:-1
position: 325174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321299-325174:-1:exon

MRPL44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MRPL44
product: mitochondrial ribosomal protein L44
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030456544.1
SIO_010081: MRPL44
subclass of: SO_0000673
so part of: MRPL44
location: complement(join(321299..321636,322481..322659,323806..324274,324613..325174))
location: region:321299-325174:-1
so has part: feature:324613-325174:-1:exon
so has part: feature:323806-324274:-1:exon
so has part: feature:322481-322659:-1:exon
so has part: feature:321299-321636:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:324613-325174:-1:exon

position:324613:-1
position: 324613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:323806-324274:-1:exon

position:323806:-1
position: 323806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324274:-1
position: 324274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:322481-322659:-1:exon

position:322481:-1
position: 322481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322659:-1
position: 322659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:321299-321636:-1:exon

position:321636:-1
position: 321636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MRPL44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MRPL44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L44, mitochondrial
translation: MAVRLLLRASRRLLTGTGTGSGSGAGTGRVSVSTGPPPQKKRWLRAYLEQQRLETPPQRRSEKPNWDYHAEIEAFRHRLQENFSLDVLKTAFVNPCYIASEEERRRGLGLDKEMVALNIQDNSQLAEQGLCFVRSYLSQCFEAAYPDLPAEGVRALVAFLSSQELVAYIARNLSIQDLTLCKEFPVPPEVLQRTFFAVIGALLSSSGPEKTGIFVRDFFIPQLIGKDLFEIWEVVNPMGLLVKELTKRNIPSPEPRITRQLGVSTVLPLYFVGLYCDKKIIAEGPGETLLAAEEEAARVALRKLYGYTENRRPWDYSKPKQGLAAEKAISSN
SIO_010081: MRPL44
subclass of: SO_0000673
so part of: MRPL44
location: complement(join(321465..321636,322481..322659,323806..324274,324613..324791))
location: region:321465-324791:-1
so has part: feature:324613-324791:-1:exon
so has part: feature:323806-324274:-1:exon
so has part: feature:322481-322659:-1:exon
so has part: feature:321465-321636:-1:exon

XP_030312404.1
type: Protein
SIO_000068: ncbiprotein

position:321465:-1
position: 321465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324791:-1
position: 324791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324613-324791:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:323806-324274:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:322481-322659:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:321465-321636:-1:exon

MFF
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: MFF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(326383..352166)
location: region:326383-352166:-1
so has part: feature:326383-352166:-1:exon
subclass of: SO_0000010

103527323
type: Gene
SIO_000068: ncbigene

position:326383:-1
position: 326383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352166:-1
position: 352166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326383-352166:-1:exon

MFF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MFF
product: mitochondrial fission factor, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_030456371.1
SIO_010081: MFF
subclass of: SO_0000673
so part of: MFF
location: complement(join(326383..327111,327710..327794,343896..343984,344868..345040,346334..346551,351880..352166))
location: region:326383-352166:-1
so has part: feature:351880-352166:-1:exon
so has part: feature:346334-346551:-1:exon
so has part: feature:344868-345040:-1:exon
so has part: feature:343896-343984:-1:exon
so has part: feature:327710-327794:-1:exon
so has part: feature:326383-327111:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:351880-352166:-1:exon

position:351880:-1
position: 351880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:346334-346551:-1:exon

position:346334:-1
position: 346334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346551:-1
position: 346551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:344868-345040:-1:exon

position:344868:-1
position: 344868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345040:-1
position: 345040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:343896-343984:-1:exon

position:343896:-1
position: 343896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343984:-1
position: 343984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:327710-327794:-1:exon

position:327710:-1
position: 327710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327794:-1
position: 327794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:326383-327111:-1:exon

position:327111:-1
position: 327111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MFF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MFF
product: mitochondrial fission factor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030456370.1
SIO_010081: MFF
subclass of: SO_0000673
so part of: MFF
location: complement(join(326383..327111,327710..327794,330835..330897,343896..343984,344868..345040,346334..346551,351880..352166))
location: region:326383-352166:-1
so has part: feature:351880-352166:-1:exon
so has part: feature:346334-346551:-1:exon
so has part: feature:344868-345040:-1:exon
so has part: feature:343896-343984:-1:exon
so has part: feature:330835-330897:-1:exon
so has part: feature:327710-327794:-1:exon
so has part: feature:326383-327111:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:351880-352166:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:346334-346551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:344868-345040:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:343896-343984:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:330835-330897:-1:exon

position:330835:-1
position: 330835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330897:-1
position: 330897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:327710-327794:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:326383-327111:-1:exon

MFF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MFF
product: mitochondrial fission factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030456368.1
SIO_010081: MFF
subclass of: SO_0000673
so part of: MFF
location: complement(join(326383..327111,327710..327794,330835..330897,336464..336622,343896..343984,344868..345040,346334..346551,351880..352166))
location: region:326383-352166:-1
so has part: feature:351880-352166:-1:exon
so has part: feature:346334-346551:-1:exon
so has part: feature:344868-345040:-1:exon
so has part: feature:343896-343984:-1:exon
so has part: feature:336464-336622:-1:exon
so has part: feature:330835-330897:-1:exon
so has part: feature:327710-327794:-1:exon
so has part: feature:326383-327111:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:351880-352166:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:346334-346551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:344868-345040:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:343896-343984:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:336464-336622:-1:exon

position:336464:-1
position: 336464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336622:-1
position: 336622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:330835-330897:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:327710-327794:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:326383-327111:-1:exon

MFF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MFF
product: mitochondrial fission factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_030456369.1
SIO_010081: MFF
subclass of: SO_0000673
so part of: MFF
location: complement(join(326383..327111,327710..327794,330835..330897,340238..340312,343896..343984,344868..345040,346334..346551,351880..352166))
location: region:326383-352166:-1
so has part: feature:351880-352166:-1:exon
so has part: feature:346334-346551:-1:exon
so has part: feature:344868-345040:-1:exon
so has part: feature:343896-343984:-1:exon
so has part: feature:340238-340312:-1:exon
so has part: feature:330835-330897:-1:exon
so has part: feature:327710-327794:-1:exon
so has part: feature:326383-327111:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:351880-352166:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:346334-346551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:344868-345040:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:343896-343984:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:340238-340312:-1:exon

position:340238:-1
position: 340238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340312:-1
position: 340312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:330835-330897:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:327710-327794:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:326383-327111:-1:exon

MFF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MFF
product: mitochondrial fission factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_030456367.1
SIO_010081: MFF
subclass of: SO_0000673
so part of: MFF
location: complement(join(326383..327111,327710..327794,330835..330897,336464..336622,340238..340312,343896..343984,344868..345040,346334..346551,351880..352166))
location: region:326383-352166:-1
so has part: feature:351880-352166:-1:exon
so has part: feature:346334-346551:-1:exon
so has part: feature:344868-345040:-1:exon
so has part: feature:343896-343984:-1:exon
so has part: feature:340238-340312:-1:exon
so has part: feature:336464-336622:-1:exon
so has part: feature:330835-330897:-1:exon
so has part: feature:327710-327794:-1:exon
so has part: feature:326383-327111:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:351880-352166:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:346334-346551:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:344868-345040:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:343896-343984:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:340238-340312:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:336464-336622:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:330835-330897:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:327710-327794:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:326383-327111:-1:exon

MFF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MFF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial fission factor isoform X5
translation: MSGAAFPSPAAEMAEMSRLQYEMEYTEGISQRMRVPEKLKVAPQNADLDTGIQEGFPNASVTMQVPERIVVAGNTEDIPFSRPPDLDLLQSTPFKPLALKTPPRVISLSDRPLDFLDLEKPPQQTPQNEEVRSVGRLKRERSMSENATRQNGQLARNDSIYGLSNLDTALEGTPDDMTVVDAASLRRQIIKLNRRLQLLEEENKERAKREMIMYSITVAFWLLNSWLWFRR
SIO_010081: MFF
subclass of: SO_0000673
so part of: MFF
location: complement(join(326980..327111,327710..327794,343896..343984,344868..345040,346334..346550))
location: region:326980-346550:-1
so has part: feature:346334-346550:-1:exon
so has part: feature:344868-345040:-1:exon
so has part: feature:343896-343984:-1:exon
so has part: feature:327710-327794:-1:exon
so has part: feature:326980-327111:-1:exon

XP_030312231.1
type: Protein
SIO_000068: ncbiprotein

position:326980:-1
position: 326980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346550:-1
position: 346550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346334-346550:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:344868-345040:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:343896-343984:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:327710-327794:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:326980-327111:-1:exon

MFF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MFF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial fission factor isoform X4
translation: MSGAAFPSPAAEMAEMSRLQYEMEYTEGISQRMRVPEKLKVAPQNADLDTGIQEGFPNASVTMQVPERIVVAGNTEDIPFSRPPDLDLLQSTPFKPLALKTPPRVISLSDRPLDFLDLEKPPQQTPQNEEVRSVGRLKRERSMSENATRQNGQLARNDSMPVLRGGSAAITSSNPHHDNTRYGLSNLDTALEGTPDDMTVVDAASLRRQIIKLNRRLQLLEEENKERAKREMIMYSITVAFWLLNSWLWFRR
SIO_010081: MFF
subclass of: SO_0000673
so part of: MFF
location: complement(join(326980..327111,327710..327794,330835..330897,343896..343984,344868..345040,346334..346550))
location: region:326980-346550:-1
so has part: feature:346334-346550:-1:exon
so has part: feature:344868-345040:-1:exon
so has part: feature:343896-343984:-1:exon
so has part: feature:330835-330897:-1:exon
so has part: feature:327710-327794:-1:exon
so has part: feature:326980-327111:-1:exon

XP_030312230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:346334-346550:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:344868-345040:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:343896-343984:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:330835-330897:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:327710-327794:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:326980-327111:-1:exon

MFF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MFF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial fission factor isoform X2
translation: MSGAAFPSPAAEMAEMSRLQYEMEYTEGISQRMRVPEKLKVAPQNADLDTGIQEGFPNASVTMQVPERIVVAGNTEDIPFSRPPDLDLLQSTPFKPLALKTPPRVISLSDRPLDFLDLEKPPQQTPQNEEVRSVGRLKRERSMSENATRQNGQLARNDSIVTPSLQQARVCPPNLLPEDGTNLYSARGILSFIQSSTRRAYQQVLDVLDENCRPVLRGGSAAITSSNPHHDNTRYGLSNLDTALEGTPDDMTVVDAASLRRQIIKLNRRLQLLEEENKERAKREMIMYSITVAFWLLNSWLWFRR
SIO_010081: MFF
subclass of: SO_0000673
so part of: MFF
location: complement(join(326980..327111,327710..327794,330835..330897,336464..336622,343896..343984,344868..345040,346334..346550))
location: region:326980-346550:-1
so has part: feature:346334-346550:-1:exon
so has part: feature:344868-345040:-1:exon
so has part: feature:343896-343984:-1:exon
so has part: feature:336464-336622:-1:exon
so has part: feature:330835-330897:-1:exon
so has part: feature:327710-327794:-1:exon
so has part: feature:326980-327111:-1:exon

XP_030312228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:346334-346550:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:344868-345040:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:343896-343984:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:336464-336622:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:330835-330897:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:327710-327794:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:326980-327111:-1:exon

MFF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MFF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial fission factor isoform X3
translation: MSGAAFPSPAAEMAEMSRLQYEMEYTEGISQRMRVPEKLKVAPQNADLDTGIQEGFPNASVTMQVPERIVVAGNTEDIPFSRPPDLDLLQSTPFKPLALKTPPRVISLSDRPLDFLDLEKPPQQTPQNEEVRSVGRLKRERSMSENATRQNGQLARNDSMWHRPDTVPRNKMPRVQSPLSTKDYTPVLRGGSAAITSSNPHHDNTRYGLSNLDTALEGTPDDMTVVDAASLRRQIIKLNRRLQLLEEENKERAKREMIMYSITVAFWLLNSWLWFRR
SIO_010081: MFF
subclass of: SO_0000673
so part of: MFF
location: complement(join(326980..327111,327710..327794,330835..330897,340238..340312,343896..343984,344868..345040,346334..346550))
location: region:326980-346550:-1
so has part: feature:346334-346550:-1:exon
so has part: feature:344868-345040:-1:exon
so has part: feature:343896-343984:-1:exon
so has part: feature:340238-340312:-1:exon
so has part: feature:330835-330897:-1:exon
so has part: feature:327710-327794:-1:exon
so has part: feature:326980-327111:-1:exon

XP_030312229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:346334-346550:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:344868-345040:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:343896-343984:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:340238-340312:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:330835-330897:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:327710-327794:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:326980-327111:-1:exon

MFF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MFF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial fission factor isoform X1
translation: MSGAAFPSPAAEMAEMSRLQYEMEYTEGISQRMRVPEKLKVAPQNADLDTGIQEGFPNASVTMQVPERIVVAGNTEDIPFSRPPDLDLLQSTPFKPLALKTPPRVISLSDRPLDFLDLEKPPQQTPQNEEVRSVGRLKRERSMSENATRQNGQLARNDSMWHRPDTVPRNKMPRVQSPLSTKDYTVTPSLQQARVCPPNLLPEDGTNLYSARGILSFIQSSTRRAYQQVLDVLDENCRPVLRGGSAAITSSNPHHDNTRYGLSNLDTALEGTPDDMTVVDAASLRRQIIKLNRRLQLLEEENKERAKREMIMYSITVAFWLLNSWLWFRR
SIO_010081: MFF
subclass of: SO_0000673
so part of: MFF
location: complement(join(326980..327111,327710..327794,330835..330897,336464..336622,340238..340312,343896..343984,344868..345040,346334..346550))
location: region:326980-346550:-1
so has part: feature:346334-346550:-1:exon
so has part: feature:344868-345040:-1:exon
so has part: feature:343896-343984:-1:exon
so has part: feature:340238-340312:-1:exon
so has part: feature:336464-336622:-1:exon
so has part: feature:330835-330897:-1:exon
so has part: feature:327710-327794:-1:exon
so has part: feature:326980-327111:-1:exon

XP_030312227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:346334-346550:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:344868-345040:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:343896-343984:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:340238-340312:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:336464-336622:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:330835-330897:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:327710-327794:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:326980-327111:-1:exon

COL4A3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: COL4A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(358417..417228)
location: region:358417-417228:-1
so has part: feature:358417-417228:-1:exon
subclass of: SO_0000010

103537979
type: Gene
SIO_000068: ncbigene

position:358417:-1
position: 358417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417228:-1
position: 417228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358417-417228:-1:exon

COL4A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: COL4A3
product: collagen type IV alpha 3 chain
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 23 Proteins, and 29% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030456293.1
SIO_010081: COL4A3
subclass of: SO_0000673
so part of: COL4A3
location: complement(join(358417..358501,358748..358920,360202..360316,361199..361376,362012..362224,362825..362923,363935..364054,364166..364237,365409..365481,365953..366083,366666..366851,367849..367899,369979..370077,370970..371050,371317..371443,371579..371718,372090..372179,373643..373741,374371..374505,375081..375170,376319..376486,377296..377409,377515..377665,378984..379081,379955..380059,381178..381270,382128..382296,383216..383404,384634..384704,385052..385147,385885..385977,387072..387236,387577..387612,388748..388835,390067..390108,390486..390539,391113..391157,392457..392513,392780..392842,394208..394285,394808..394849,394956..394991,395462..395524,396190..396267,396876..396902,397777..397830,398557..398619,398891..398935,399408..399452,401983..402072,404617..404673,417145..417228))
location: region:358417-417228:-1
so has part: feature:417145-417228:-1:exon
so has part: feature:404617-404673:-1:exon
so has part: feature:401983-402072:-1:exon
so has part: feature:399408-399452:-1:exon
so has part: feature:398891-398935:-1:exon
so has part: feature:398557-398619:-1:exon
so has part: feature:397777-397830:-1:exon
so has part: feature:396876-396902:-1:exon
so has part: feature:396190-396267:-1:exon
so has part: feature:395462-395524:-1:exon
so has part: feature:394956-394991:-1:exon
so has part: feature:394808-394849:-1:exon
so has part: feature:394208-394285:-1:exon
so has part: feature:392780-392842:-1:exon
so has part: feature:392457-392513:-1:exon
so has part: feature:391113-391157:-1:exon
so has part: feature:390486-390539:-1:exon
so has part: feature:390067-390108:-1:exon
so has part: feature:388748-388835:-1:exon
so has part: feature:387577-387612:-1:exon
so has part: feature:387072-387236:-1:exon
so has part: feature:385885-385977:-1:exon
so has part: feature:385052-385147:-1:exon
so has part: feature:384634-384704:-1:exon
so has part: feature:383216-383404:-1:exon
so has part: feature:382128-382296:-1:exon
so has part: feature:381178-381270:-1:exon
so has part: feature:379955-380059:-1:exon
so has part: feature:378984-379081:-1:exon
so has part: feature:377515-377665:-1:exon
so has part: feature:377296-377409:-1:exon
so has part: feature:376319-376486:-1:exon
so has part: feature:375081-375170:-1:exon
so has part: feature:374371-374505:-1:exon
so has part: feature:373643-373741:-1:exon
so has part: feature:372090-372179:-1:exon
so has part: feature:371579-371718:-1:exon
so has part: feature:371317-371443:-1:exon
so has part: feature:370970-371050:-1:exon
so has part: feature:369979-370077:-1:exon
so has part: feature:367849-367899:-1:exon
so has part: feature:366666-366851:-1:exon
so has part: feature:365953-366083:-1:exon
so has part: feature:365409-365481:-1:exon
so has part: feature:364166-364237:-1:exon
so has part: feature:363935-364054:-1:exon
so has part: feature:362825-362923:-1:exon
so has part: feature:362012-362224:-1:exon
so has part: feature:361199-361376:-1:exon
so has part: feature:360202-360316:-1:exon
so has part: feature:358748-358920:-1:exon
so has part: feature:358417-358501:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:417145-417228:-1:exon

position:417145:-1
position: 417145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:404617-404673:-1:exon

position:404617:-1
position: 404617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404673:-1
position: 404673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:401983-402072:-1:exon

position:401983:-1
position: 401983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402072:-1
position: 402072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:399408-399452:-1:exon

position:399408:-1
position: 399408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399452:-1
position: 399452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:398891-398935:-1:exon

position:398891:-1
position: 398891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398935:-1
position: 398935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:398557-398619:-1:exon

position:398557:-1
position: 398557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398619:-1
position: 398619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:397777-397830:-1:exon

position:397777:-1
position: 397777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397830:-1
position: 397830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:396876-396902:-1:exon

position:396876:-1
position: 396876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396902:-1
position: 396902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:396190-396267:-1:exon

position:396190:-1
position: 396190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396267:-1
position: 396267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:395462-395524:-1:exon

position:395462:-1
position: 395462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395524:-1
position: 395524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:394956-394991:-1:exon

position:394956:-1
position: 394956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394991:-1
position: 394991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:394808-394849:-1:exon

position:394808:-1
position: 394808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394849:-1
position: 394849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:394208-394285:-1:exon

position:394208:-1
position: 394208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394285:-1
position: 394285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:392780-392842:-1:exon

position:392780:-1
position: 392780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392842:-1
position: 392842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:392457-392513:-1:exon

position:392457:-1
position: 392457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392513:-1
position: 392513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:391113-391157:-1:exon

position:391113:-1
position: 391113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:391157:-1
position: 391157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:390486-390539:-1:exon

position:390486:-1
position: 390486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390539:-1
position: 390539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:390067-390108:-1:exon

position:390067:-1
position: 390067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390108:-1
position: 390108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:388748-388835:-1:exon

position:388748:-1
position: 388748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388835:-1
position: 388835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:387577-387612:-1:exon

position:387577:-1
position: 387577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387612:-1
position: 387612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:387072-387236:-1:exon

position:387072:-1
position: 387072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387236:-1
position: 387236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:385885-385977:-1:exon

position:385885:-1
position: 385885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385977:-1
position: 385977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:385052-385147:-1:exon

position:385052:-1
position: 385052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385147:-1
position: 385147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:384634-384704:-1:exon

position:384634:-1
position: 384634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384704:-1
position: 384704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:383216-383404:-1:exon

position:383216:-1
position: 383216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383404:-1
position: 383404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:382128-382296:-1:exon

position:382128:-1
position: 382128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382296:-1
position: 382296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:381178-381270:-1:exon

position:381178:-1
position: 381178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381270:-1
position: 381270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:379955-380059:-1:exon

position:379955:-1
position: 379955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380059:-1
position: 380059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:378984-379081:-1:exon

position:378984:-1
position: 378984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379081:-1
position: 379081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:377515-377665:-1:exon

position:377515:-1
position: 377515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:377665:-1
position: 377665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:377296-377409:-1:exon

position:377296:-1
position: 377296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:377409:-1
position: 377409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:376319-376486:-1:exon

position:376319:-1
position: 376319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376486:-1
position: 376486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:375081-375170:-1:exon

position:375081:-1
position: 375081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375170:-1
position: 375170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:374371-374505:-1:exon

position:374371:-1
position: 374371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374505:-1
position: 374505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:373643-373741:-1:exon

position:373643:-1
position: 373643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:373741:-1
position: 373741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:372090-372179:-1:exon

position:372090:-1
position: 372090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372179:-1
position: 372179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:371579-371718:-1:exon

position:371579:-1
position: 371579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371718:-1
position: 371718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:371317-371443:-1:exon

position:371317:-1
position: 371317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371443:-1
position: 371443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:370970-371050:-1:exon

position:370970:-1
position: 370970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371050:-1
position: 371050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:369979-370077:-1:exon

position:369979:-1
position: 369979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370077:-1
position: 370077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:367849-367899:-1:exon

position:367849:-1
position: 367849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367899:-1
position: 367899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:366666-366851:-1:exon

position:366666:-1
position: 366666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366851:-1
position: 366851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:365953-366083:-1:exon

position:365953:-1
position: 365953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366083:-1
position: 366083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:365409-365481:-1:exon

position:365409:-1
position: 365409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365481:-1
position: 365481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:364166-364237:-1:exon

position:364166:-1
position: 364166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364237:-1
position: 364237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:363935-364054:-1:exon

position:363935:-1
position: 363935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364054:-1
position: 364054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:362825-362923:-1:exon

position:362825:-1
position: 362825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362923:-1
position: 362923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:362012-362224:-1:exon

position:362012:-1
position: 362012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362224:-1
position: 362224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:361199-361376:-1:exon

position:361199:-1
position: 361199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361376:-1
position: 361376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:360202-360316:-1:exon

position:360202:-1
position: 360202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360316:-1
position: 360316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:358748-358920:-1:exon

position:358748:-1
position: 358748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358920:-1
position: 358920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:358417-358501:-1:exon

position:358501:-1
position: 358501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

COL4A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: COL4A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-3(IV) chain
translation: MAARGCPRRLTPLLLLALLWPGRFAAAESCVCKGKSPCFCDSIKGSKGEKGFPGVPGPPGQRGFPGPEGPPGPQGPKGSPGLTGLAGPKGIRGVPGIPGFSGPPGLPGEPGAVGPPGRPGIPGCNGTKGDRGFPGPPGRRGAPGFPGITGIKGEKGCPADGYYQGSGAKGDPGLPGVPGLQGVQGAQGYPGEPGPQGPPGALGMPGKAGPPGPKGLMGLKVIGAKGRKGDTGLTGPPGPPGTVIVTLSGPDNTTDLKGEKGEKGSTGLPGPMGLAGLAGDSQSEKGDQGEPGAQGKPGKEGPPGPPGLPGQKGEQGRPGLAGRQGAKGLKGHPGPPGACGRTEYYDNLVGEKGDEGPPGPPGPKGQRGMPGPQGPPGGAGRPGVSRPGLRGPPGFPGPKGAKGVKGQAGLCVVGPPGLPGITGRPGSVGFPGPPGEPGRVTFRKGLPGLPGEPGCIGPPGPPGDTGMKGDEASVCTKCSYIPGIPGFPGSPGPHGRDGMPGREGATGPKGSPGSPGAPGFPGAQGPPGFRGDQGLKGSKGEPAYVYPEGPKGEQGDPGARGDRGRKGSSGFLGRPGSKGSKGSKGEEGLAGSKGERGLPGLPGSHGLPGEMGLPGLPGYGPQGIRGFKGSKGIPGPPGLPGEAGLKGETSRITPLPALPGPQGSDGLPGPPGVPGRAGARGQPGDSGHPGPTGDTGFPGLGFPGNPGPKGDKGLAGARGSPGCEGKTGDPGRAGDLGQPGEKGDPGMVIPGDPGRLGSPGGHGIPGSKGDPGFPGLPGLPGHAGRDGDDGLRGDRGSPGVPGDPGFPGKPAECLIGLPGLPGAQGATGPPGGRGLQGSKGKQGPPGLSIPGVYGKPGEPGLIGIQGNTGLPGPRGPSGRIGISGVPGLRGEPGFRGLLGIPGPPGMIGRPGNPGIRGSSGFPGQKGRKGFLGAKGEPGDKGFPGPSETLVGIGTKGEQGLKGVQGRMGLRGEKGHTGLQGPPGLDGSEGIPGRPGIKGVMGLPGIPGEQGSPGAPGNKGDMGIPGPKGQKGSPGFPGQPGDPGPPGYAGFQGDRGDPGYPSAGPPGEPGPKGDPGPPGVPGSKGEKGSQGHPGQRGLPGPHGMQGETGCAGIPGKLGPRGDTGVKGQQGCPGQQGISGPPGGVGYPGKNGLVGERGNQGQDGMPGPPGVKGEPGPPGRGIPGLRGIPGRRGIKGNMGLPGFPGPPGMKGHQGDQGPIGPPGLVGVPGFQGSRGIAVPGQKGNRGIAGADGRPGAPGFPGPPGIPTPSMKGSKGVRGADGIPGPTGPSGDIGPPGPKGIEGRSGYPGARGDPGFIGFPGVKGEKGNQGPPGPQGEAGPRGPKGQRGPPGVPARVFSIPGSKGLPGLPGIPGPPGDPGLQGIPGLQGPKGVKGLPGSFGHPGQPGLPGPKGDRGFPGQRGQPGLIGFPGLQGLPGLPGAVISGPKRRGFIFTRHSQSTKIPSCPLGTSEIYVGYSLLFVQGNERAHGQDLGTAGSCLQRFTTMPFLFCNPNDVCSFASRNDYSYWLSTATVMPADMAPISGRALEPHISRCVVCEGAAMVIAVHSQTTAVPTCPEGWTSLWKGFSFVMYTSAGSEASGQALASPGSCLEEFRAIPFIECHGRGTCNYYTNSYSFWLASLNPRRMFRKPLSQTLKAGELENIISRCQVCMKRSV
SIO_010081: COL4A3
subclass of: SO_0000673
so part of: COL4A3
location: complement(join(358417..358501,358748..358920,360202..360316,361199..361376,362012..362224,362825..362923,363935..364054,364166..364237,365409..365481,365953..366083,366666..366851,367849..367899,369979..370077,370970..371050,371317..371443,371579..371718,372090..372179,373643..373741,374371..374505,375081..375170,376319..376486,377296..377409,377515..377665,378984..379081,379955..380059,381178..381270,382128..382296,383216..383404,384634..384704,385052..385147,385885..385977,387072..387236,387577..387612,388748..388835,390067..390108,390486..390539,391113..391157,392457..392513,392780..392842,394208..394285,394808..394849,394956..394991,395462..395524,396190..396267,396876..396902,397777..397830,398557..398619,398891..398935,399408..399452,401983..402072,404617..404673,417145..417228))
location: region:358417-417228:-1
so has part: feature:417145-417228:-1:exon
so has part: feature:404617-404673:-1:exon
so has part: feature:401983-402072:-1:exon
so has part: feature:399408-399452:-1:exon
so has part: feature:398891-398935:-1:exon
so has part: feature:398557-398619:-1:exon
so has part: feature:397777-397830:-1:exon
so has part: feature:396876-396902:-1:exon
so has part: feature:396190-396267:-1:exon
so has part: feature:395462-395524:-1:exon
so has part: feature:394956-394991:-1:exon
so has part: feature:394808-394849:-1:exon
so has part: feature:394208-394285:-1:exon
so has part: feature:392780-392842:-1:exon
so has part: feature:392457-392513:-1:exon
so has part: feature:391113-391157:-1:exon
so has part: feature:390486-390539:-1:exon
so has part: feature:390067-390108:-1:exon
so has part: feature:388748-388835:-1:exon
so has part: feature:387577-387612:-1:exon
so has part: feature:387072-387236:-1:exon
so has part: feature:385885-385977:-1:exon
so has part: feature:385052-385147:-1:exon
so has part: feature:384634-384704:-1:exon
so has part: feature:383216-383404:-1:exon
so has part: feature:382128-382296:-1:exon
so has part: feature:381178-381270:-1:exon
so has part: feature:379955-380059:-1:exon
so has part: feature:378984-379081:-1:exon
so has part: feature:377515-377665:-1:exon
so has part: feature:377296-377409:-1:exon
so has part: feature:376319-376486:-1:exon
so has part: feature:375081-375170:-1:exon
so has part: feature:374371-374505:-1:exon
so has part: feature:373643-373741:-1:exon
so has part: feature:372090-372179:-1:exon
so has part: feature:371579-371718:-1:exon
so has part: feature:371317-371443:-1:exon
so has part: feature:370970-371050:-1:exon
so has part: feature:369979-370077:-1:exon
so has part: feature:367849-367899:-1:exon
so has part: feature:366666-366851:-1:exon
so has part: feature:365953-366083:-1:exon
so has part: feature:365409-365481:-1:exon
so has part: feature:364166-364237:-1:exon
so has part: feature:363935-364054:-1:exon
so has part: feature:362825-362923:-1:exon
so has part: feature:362012-362224:-1:exon
so has part: feature:361199-361376:-1:exon
so has part: feature:360202-360316:-1:exon
so has part: feature:358748-358920:-1:exon
so has part: feature:358417-358501:-1:exon

XP_030312153.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:417145-417228:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:404617-404673:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:401983-402072:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:399408-399452:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:398891-398935:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:398557-398619:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:397777-397830:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:396876-396902:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:396190-396267:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:395462-395524:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:394956-394991:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:394808-394849:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:394208-394285:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:392780-392842:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:392457-392513:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:391113-391157:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:390486-390539:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:390067-390108:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:388748-388835:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:387577-387612:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:387072-387236:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:385885-385977:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:385052-385147:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:384634-384704:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:383216-383404:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:382128-382296:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:381178-381270:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:379955-380059:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:378984-379081:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:377515-377665:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:377296-377409:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:376319-376486:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:375081-375170:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:374371-374505:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:373643-373741:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:372090-372179:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:371579-371718:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:371317-371443:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:370970-371050:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:369979-370077:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:367849-367899:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:366666-366851:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:365953-366083:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:365409-365481:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:364166-364237:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:363935-364054:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:362825-362923:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:362012-362224:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:361199-361376:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:360202-360316:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:358748-358920:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:358417-358501:-1:exon

COL4A4
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: COL4A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 420625..479395
location: region:420625-479395:1
so has part: feature:420625-479395:1:exon
subclass of: SO_0000010

103527325
type: Gene
SIO_000068: ncbigene

position:420625:1
position: 420625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479395:1
position: 479395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420625-479395:1:exon

COL4A4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: COL4A4
product: collagen type IV alpha 4 chain
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 22% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030456294.1
SIO_010081: COL4A4
subclass of: SO_0000673
so part of: COL4A4
location: join(420625..420678,420833..420888,422331..422370,424248..424325,434595..434729,435753..435797,437413..437529,440260..440328,440571..440606,441369..441431,441900..441935,442132..442173,443068..443148,443476..443529,444759..444818,445471..445515,445863..445916,447746..447815,448862..448966,449543..449707,450388..450480,450791..450954,451536..451608,452301..452407,452848..453031,453613..453681,454745..454849,455717..455935,456839..457000,457636..457806,458676..458819,459443..459550,459807..459985,461669..461732,463174..463248,463680..463787,464124..464231,468112..468183,468949..469077,470752..470859,471731..471886,472603..472701,473012..473020,473332..473463,475453..475569,476280..476468,478224..478510,479132..479395)
location: region:420625-479395:1
so has part: feature:420625-420678:1:exon
so has part: feature:420833-420888:1:exon
so has part: feature:422331-422370:1:exon
so has part: feature:424248-424325:1:exon
so has part: feature:434595-434729:1:exon
so has part: feature:435753-435797:1:exon
so has part: feature:437413-437529:1:exon
so has part: feature:440260-440328:1:exon
so has part: feature:440571-440606:1:exon
so has part: feature:441369-441431:1:exon
so has part: feature:441900-441935:1:exon
so has part: feature:442132-442173:1:exon
so has part: feature:443068-443148:1:exon
so has part: feature:443476-443529:1:exon
so has part: feature:444759-444818:1:exon
so has part: feature:445471-445515:1:exon
so has part: feature:445863-445916:1:exon
so has part: feature:447746-447815:1:exon
so has part: feature:448862-448966:1:exon
so has part: feature:449543-449707:1:exon
so has part: feature:450388-450480:1:exon
so has part: feature:450791-450954:1:exon
so has part: feature:451536-451608:1:exon
so has part: feature:452301-452407:1:exon
so has part: feature:452848-453031:1:exon
so has part: feature:453613-453681:1:exon
so has part: feature:454745-454849:1:exon
so has part: feature:455717-455935:1:exon
so has part: feature:456839-457000:1:exon
so has part: feature:457636-457806:1:exon
so has part: feature:458676-458819:1:exon
so has part: feature:459443-459550:1:exon
so has part: feature:459807-459985:1:exon
so has part: feature:461669-461732:1:exon
so has part: feature:463174-463248:1:exon
so has part: feature:463680-463787:1:exon
so has part: feature:464124-464231:1:exon
so has part: feature:468112-468183:1:exon
so has part: feature:468949-469077:1:exon
so has part: feature:470752-470859:1:exon
so has part: feature:471731-471886:1:exon
so has part: feature:472603-472701:1:exon
so has part: feature:473012-473020:1:exon
so has part: feature:473332-473463:1:exon
so has part: feature:475453-475569:1:exon
so has part: feature:476280-476468:1:exon
so has part: feature:478224-478510:1:exon
so has part: feature:479132-479395:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:420625-420678:1:exon

position:420678:1
position: 420678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:420833-420888:1:exon

position:420833:1
position: 420833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420888:1
position: 420888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:422331-422370:1:exon

position:422331:1
position: 422331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422370:1
position: 422370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:424248-424325:1:exon

position:424248:1
position: 424248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424325:1
position: 424325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:434595-434729:1:exon

position:434595:1
position: 434595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434729:1
position: 434729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:435753-435797:1:exon

position:435753:1
position: 435753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435797:1
position: 435797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:437413-437529:1:exon

position:437413:1
position: 437413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437529:1
position: 437529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:440260-440328:1:exon

position:440260:1
position: 440260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440328:1
position: 440328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:440571-440606:1:exon

position:440571:1
position: 440571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440606:1
position: 440606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:441369-441431:1:exon

position:441369:1
position: 441369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441431:1
position: 441431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:441900-441935:1:exon

position:441900:1
position: 441900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441935:1
position: 441935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:442132-442173:1:exon

position:442132:1
position: 442132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442173:1
position: 442173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:443068-443148:1:exon

position:443068:1
position: 443068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443148:1
position: 443148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:443476-443529:1:exon

position:443476:1
position: 443476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443529:1
position: 443529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:444759-444818:1:exon

position:444759:1
position: 444759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444818:1
position: 444818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:445471-445515:1:exon

position:445471:1
position: 445471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445515:1
position: 445515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:445863-445916:1:exon

position:445863:1
position: 445863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445916:1
position: 445916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:447746-447815:1:exon

position:447746:1
position: 447746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447815:1
position: 447815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:448862-448966:1:exon

position:448862:1
position: 448862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448966:1
position: 448966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:449543-449707:1:exon

position:449543:1
position: 449543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449707:1
position: 449707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:450388-450480:1:exon

position:450388:1
position: 450388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450480:1
position: 450480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:450791-450954:1:exon

position:450791:1
position: 450791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450954:1
position: 450954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:451536-451608:1:exon

position:451536:1
position: 451536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451608:1
position: 451608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:452301-452407:1:exon

position:452301:1
position: 452301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452407:1
position: 452407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:452848-453031:1:exon

position:452848:1
position: 452848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453031:1
position: 453031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:453613-453681:1:exon

position:453613:1
position: 453613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453681:1
position: 453681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:454745-454849:1:exon

position:454745:1
position: 454745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454849:1
position: 454849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:455717-455935:1:exon

position:455717:1
position: 455717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455935:1
position: 455935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:456839-457000:1:exon

position:456839:1
position: 456839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457000:1
position: 457000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:457636-457806:1:exon

position:457636:1
position: 457636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457806:1
position: 457806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:458676-458819:1:exon

position:458676:1
position: 458676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458819:1
position: 458819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:459443-459550:1:exon

position:459443:1
position: 459443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459550:1
position: 459550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:459807-459985:1:exon

position:459807:1
position: 459807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459985:1
position: 459985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:461669-461732:1:exon

position:461669:1
position: 461669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461732:1
position: 461732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:463174-463248:1:exon

position:463174:1
position: 463174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463248:1
position: 463248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:463680-463787:1:exon

position:463680:1
position: 463680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463787:1
position: 463787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:464124-464231:1:exon

position:464124:1
position: 464124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464231:1
position: 464231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:468112-468183:1:exon

position:468112:1
position: 468112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468183:1
position: 468183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:468949-469077:1:exon

position:468949:1
position: 468949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469077:1
position: 469077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:470752-470859:1:exon

position:470752:1
position: 470752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470859:1
position: 470859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:471731-471886:1:exon

position:471731:1
position: 471731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471886:1
position: 471886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:472603-472701:1:exon

position:472603:1
position: 472603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472701:1
position: 472701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:473012-473020:1:exon

position:473012:1
position: 473012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473020:1
position: 473020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:473332-473463:1:exon

position:473332:1
position: 473332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473463:1
position: 473463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:475453-475569:1:exon

position:475453:1
position: 475453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475569:1
position: 475569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:476280-476468:1:exon

position:476280:1
position: 476280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476468:1
position: 476468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:478224-478510:1:exon

position:478224:1
position: 478224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478510:1
position: 478510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:479132-479395:1:exon

position:479132:1
position: 479132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COL4A4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: COL4A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-4(IV) chain
translation: MVQMPFGYPVIIHVCTSDMALTKDSVVQIKWLTTAAWWLLIVFSAQEIDGGEYAYVSPCGGRDCSVCRCFPEKGSRGQPGELGPQGPIGSLGSTGPAGLPGEKGQRGENGQPGPAGGRGDKGPTGVPGFPGLDGVPGLPGSEGPRGKHGLDGCNGSRGDPGFPGENGYIGPIGPYGNPGQKGEKGNSVYVSHFGKGPPGDRGDPGPPGMPGPRGSRGTRGPAGYPGQPGLPGIPGYPGLPGEQGNPGIGVDGQKGEPGDVGLPGPPGSPLLVGPPGAQLFKGDKGQKGLPGVTGYRGPRGPKGVPGRGEKGEKGIPGFPGLRGNPGSYGRAGFPGMKGETGFAGFPGQPGYPGIQGDPGEKGPPGPPGAVGTLLLPVKGSRGDPGGPGPAGDVGSVGPIGPAGLLGRPGEDGTSLPGLPGVSGAPGPQGFQGDPGFPGTGESIPGRPGFPGPPGLPGQPGRQGLPGPPSVICTDRGTPGEPGAKGQIGLPGRKGEKGAKGNQGLCSCTAGPPGPRGVQGPPGTQGKKGQMGYPGRQGEKGDPGLSGAMGSSGLPGTPGSAGPHGEKGEKGDPGRVTIKGIKGERGPTGVPGFPGPRGNDGRDGELGLPGEKGAQGDSGVPLPGDKGFPGVPGLPGVKGQMGLPGLGFPGPPGVRGSPGDFGDTGSVGPPGPKGQKGETVCFTLPYPGNPGPPGFKGVQGPKGLKGLPGRPGPSGFDGQKGHRGRPGAGIPGPEGFRGQAGDPGDEGERGFAVDGKHGPPGPPGIDGLKGVPGDTTYGPPGIPGNRGQPGPPGAQGARGDPGIPGLRGQPGTPGFPGAKGFRGLEGDIGAPGCPGFPGPPCDTRIPGPPGFRGVTGLPGPQGLPGFKGQRGDRGPAGPPGTKGLKGFPGSQGPPGPPGSRGIPGPAGSKGPPGFPGQTGSKGIQGPQGFPGLPGTQGPMGISGTKGEEGKMGSPGPSGESGDMGITGERGPPGDSGYVSIRLEKGQKGEPGSPGENGIRGERGDKGNAGFRGTPGFPGKNGVPGLPGDHGDTGLMGFPGSRGFPGPKGITGITGFQGQPGDQGDIGLPGIPGNPGLTGSKGAKGKRGDPTPLLGTHGQKGPSGDPGSPGLPGFPGEKGSPGIQGQPGRPGSKGDPGSPGTPGFPGATGPQGLPGEPGEKGKHGISGPPGLQGLAGSQGRKGLPGLPGLDGLDGLKGQKGSAGAPGQSETGPPGYPGELGPKGDRGEPGWPGISIPGPPGERGFPGFPGRRGPVGPPGPMGRSPDSASPGPPGDQGPPGLDGIRGHPGNPGPPGETVFVPGDPGDTGIQGSPGNPGQRGQRGARGPSGSPGRGGPKGPMGIHGPQGPPGAPGEPGDQGFQGRPGPRGPTGFIGDPGEPGKRDDSCPEIPGPPGEAGQRGHDGSVGLPGPIGHPGPQGRKGEEGSCGLPGQDGLPGATGPPGDQGHMGEQGYTGPQGPPGQTGIPGPPGPHSRSESGFLLVLHSQSDREPLCPQGMPKLWTGYSLLYLEGQEKAHNQDLGLAGSCLPVFNTMPFAYCNINQVCYYASRNDKSYWLSSAAPLPVAPLSEEEIQPYISRCAVCEAPAQAVAVHSQDQSIPPCPANWRSLWIGYSFLMHTGSGDQGGGQSLMSPGSCLEDFRSAPFIECQGQRGTCQFFANEYSFWLTTVMPELQFASAPLSGTLKEGQEQRKIISRCQVCLRHG
SIO_010081: COL4A4
subclass of: SO_0000673
so part of: COL4A4
location: join(420625..420678,420833..420888,422331..422370,424248..424325,434595..434729,435753..435797,437413..437529,440260..440328,440571..440606,441369..441431,441900..441935,442132..442173,443068..443148,443476..443529,444759..444818,445471..445515,445863..445916,447746..447815,448862..448966,449543..449707,450388..450480,450791..450954,451536..451608,452301..452407,452848..453031,453613..453681,454745..454849,455717..455935,456839..457000,457636..457806,458676..458819,459443..459550,459807..459985,461669..461732,463174..463248,463680..463787,464124..464231,468112..468183,468949..469077,470752..470859,471731..471886,472603..472701,473012..473020,473332..473463,475453..475569,476280..476468,478224..478510,479132..479395)
location: region:420625-479395:1
so has part: feature:420625-420678:1:exon
so has part: feature:420833-420888:1:exon
so has part: feature:422331-422370:1:exon
so has part: feature:424248-424325:1:exon
so has part: feature:434595-434729:1:exon
so has part: feature:435753-435797:1:exon
so has part: feature:437413-437529:1:exon
so has part: feature:440260-440328:1:exon
so has part: feature:440571-440606:1:exon
so has part: feature:441369-441431:1:exon
so has part: feature:441900-441935:1:exon
so has part: feature:442132-442173:1:exon
so has part: feature:443068-443148:1:exon
so has part: feature:443476-443529:1:exon
so has part: feature:444759-444818:1:exon
so has part: feature:445471-445515:1:exon
so has part: feature:445863-445916:1:exon
so has part: feature:447746-447815:1:exon
so has part: feature:448862-448966:1:exon
so has part: feature:449543-449707:1:exon
so has part: feature:450388-450480:1:exon
so has part: feature:450791-450954:1:exon
so has part: feature:451536-451608:1:exon
so has part: feature:452301-452407:1:exon
so has part: feature:452848-453031:1:exon
so has part: feature:453613-453681:1:exon
so has part: feature:454745-454849:1:exon
so has part: feature:455717-455935:1:exon
so has part: feature:456839-457000:1:exon
so has part: feature:457636-457806:1:exon
so has part: feature:458676-458819:1:exon
so has part: feature:459443-459550:1:exon
so has part: feature:459807-459985:1:exon
so has part: feature:461669-461732:1:exon
so has part: feature:463174-463248:1:exon
so has part: feature:463680-463787:1:exon
so has part: feature:464124-464231:1:exon
so has part: feature:468112-468183:1:exon
so has part: feature:468949-469077:1:exon
so has part: feature:470752-470859:1:exon
so has part: feature:471731-471886:1:exon
so has part: feature:472603-472701:1:exon
so has part: feature:473012-473020:1:exon
so has part: feature:473332-473463:1:exon
so has part: feature:475453-475569:1:exon
so has part: feature:476280-476468:1:exon
so has part: feature:478224-478510:1:exon
so has part: feature:479132-479395:1:exon

XP_030312154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:420625-420678:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:420833-420888:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:422331-422370:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:424248-424325:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:434595-434729:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:435753-435797:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:437413-437529:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:440260-440328:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:440571-440606:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:441369-441431:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:441900-441935:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:442132-442173:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:443068-443148:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:443476-443529:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:444759-444818:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:445471-445515:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:445863-445916:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:447746-447815:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:448862-448966:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:449543-449707:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:450388-450480:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:450791-450954:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:451536-451608:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:452301-452407:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:452848-453031:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:453613-453681:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:454745-454849:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:455717-455935:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:456839-457000:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:457636-457806:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:458676-458819:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:459443-459550:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:459807-459985:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:461669-461732:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:463174-463248:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:463680-463787:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:464124-464231:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:468112-468183:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:468949-469077:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:470752-470859:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:471731-471886:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:472603-472701:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:473012-473020:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:473332-473463:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:475453-475569:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:476280-476468:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:478224-478510:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:479132-479395:1:exon

RHBDD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: RHBDD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(489189..522746)
location: region:489189-522746:-1
so has part: feature:489189-522746:-1:exon
subclass of: SO_0000010

103527326
type: Gene
SIO_000068: ncbigene

position:489189:-1
position: 489189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522746:-1
position: 522746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489189-522746:-1:exon

RHBDD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RHBDD1
product: rhomboid domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030456574.1
SIO_010081: RHBDD1
subclass of: SO_0000673
so part of: RHBDD1
location: complement(join(489189..490782,504646..504765,508184..508234,509648..509736,512837..512969,515738..516252,522659..522746))
location: region:489189-522746:-1
so has part: feature:522659-522746:-1:exon
so has part: feature:515738-516252:-1:exon
so has part: feature:512837-512969:-1:exon
so has part: feature:509648-509736:-1:exon
so has part: feature:508184-508234:-1:exon
so has part: feature:504646-504765:-1:exon
so has part: feature:489189-490782:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:522659-522746:-1:exon

position:522659:-1
position: 522659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:515738-516252:-1:exon

position:515738:-1
position: 515738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:516252:-1
position: 516252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:512837-512969:-1:exon

position:512837:-1
position: 512837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512969:-1
position: 512969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:509648-509736:-1:exon

position:509648:-1
position: 509648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509736:-1
position: 509736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:508184-508234:-1:exon

position:508184:-1
position: 508184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508234:-1
position: 508234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:504646-504765:-1:exon

position:504646:-1
position: 504646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504765:-1
position: 504765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:489189-490782:-1:exon

position:490782:-1
position: 490782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RHBDD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RHBDD1
product: rhomboid domain containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030456576.1
SIO_010081: RHBDD1
subclass of: SO_0000673
so part of: RHBDD1
location: complement(join(489189..490782,504646..504765,508184..508234,509648..509736,512837..512969,515738..516252,518213..518372,522659..522746))
location: region:489189-522746:-1
so has part: feature:522659-522746:-1:exon
so has part: feature:518213-518372:-1:exon
so has part: feature:515738-516252:-1:exon
so has part: feature:512837-512969:-1:exon
so has part: feature:509648-509736:-1:exon
so has part: feature:508184-508234:-1:exon
so has part: feature:504646-504765:-1:exon
so has part: feature:489189-490782:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:522659-522746:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:518213-518372:-1:exon

position:518213:-1
position: 518213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518372:-1
position: 518372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:515738-516252:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:512837-512969:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:509648-509736:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:508184-508234:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:504646-504765:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:489189-490782:-1:exon

RHBDD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RHBDD1
product: rhomboid domain containing 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030456579.1
SIO_010081: RHBDD1
subclass of: SO_0000673
so part of: RHBDD1
location: complement(join(489189..490782,504646..504765,508184..508234,509648..509736,512837..512969,515738..516252,522224..522337))
location: region:489189-522337:-1
so has part: feature:522224-522337:-1:exon
so has part: feature:515738-516252:-1:exon
so has part: feature:512837-512969:-1:exon
so has part: feature:509648-509736:-1:exon
so has part: feature:508184-508234:-1:exon
so has part: feature:504646-504765:-1:exon
so has part: feature:489189-490782:-1:exon

position:522337:-1
position: 522337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522224-522337:-1:exon

position:522224:-1
position: 522224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:515738-516252:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:512837-512969:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:509648-509736:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:508184-508234:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:504646-504765:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:489189-490782:-1:exon

RHBDD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RHBDD1
product: rhomboid domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030456575.1
SIO_010081: RHBDD1
subclass of: SO_0000673
so part of: RHBDD1
location: complement(join(489189..490782,504646..504765,508184..508234,509648..509736,512837..512969,515738..516252,522217..522337))
location: region:489189-522337:-1
so has part: feature:522217-522337:-1:exon
so has part: feature:515738-516252:-1:exon
so has part: feature:512837-512969:-1:exon
so has part: feature:509648-509736:-1:exon
so has part: feature:508184-508234:-1:exon
so has part: feature:504646-504765:-1:exon
so has part: feature:489189-490782:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:522217-522337:-1:exon

position:522217:-1
position: 522217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:515738-516252:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:512837-512969:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:509648-509736:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:508184-508234:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:504646-504765:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:489189-490782:-1:exon

RHBDD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RHBDD1
product: rhomboid domain containing 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030456578.1
SIO_010081: RHBDD1
subclass of: SO_0000673
so part of: RHBDD1
location: complement(join(489189..490782,504646..504765,508184..508234,509648..509736,512837..512969,515738..516252,518213..518372,521183..521247))
location: region:489189-521247:-1
so has part: feature:521183-521247:-1:exon
so has part: feature:518213-518372:-1:exon
so has part: feature:515738-516252:-1:exon
so has part: feature:512837-512969:-1:exon
so has part: feature:509648-509736:-1:exon
so has part: feature:508184-508234:-1:exon
so has part: feature:504646-504765:-1:exon
so has part: feature:489189-490782:-1:exon

position:521247:-1
position: 521247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:521183-521247:-1:exon

position:521183:-1
position: 521183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:518213-518372:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:515738-516252:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:512837-512969:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:509648-509736:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:508184-508234:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:504646-504765:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:489189-490782:-1:exon

RHBDD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RHBDD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rhomboid-related protein 4
translation: MQRREGRVSAGLLLLLYQISQIGLQNIPSVTLAVLALNIFLFLNPVRPLPEVCISVHEGFYKKNWQRLLLSPVHHADDWHLYYNMISMLWKGIMLERKLKSMWFAYIIAVFSVLIGVVYMVLEFMLVKILDDPSYEMNCAVGFSGVLFALKVLNNHYNPGRVSTVFGWPIPSKYACWVELVAIHLISPGTSFAGHLSGILVGLMYTMGPLKKIMKACAGGISSFTDPARPRDYFSEHYGYSGYQYRTPRNYYEYTGGLTEEEQLERAVLNSLNERDLGGAAYSHARRPFGFWLPHEQHSEEEIRRQRLRRFQR
SIO_010081: RHBDD1
subclass of: SO_0000673
so part of: RHBDD1
location: complement(join(490667..490782,504646..504765,508184..508234,509648..509736,512837..512969,515738..516170))
location: region:490667-516170:-1
so has part: feature:515738-516170:-1:exon
so has part: feature:512837-512969:-1:exon
so has part: feature:509648-509736:-1:exon
so has part: feature:508184-508234:-1:exon
so has part: feature:504646-504765:-1:exon
so has part: feature:490667-490782:-1:exon

XP_030312434.1
type: Protein
SIO_000068: ncbiprotein

position:490667:-1
position: 490667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:516170:-1
position: 516170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515738-516170:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:512837-512969:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:509648-509736:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:508184-508234:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:504646-504765:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:490667-490782:-1:exon

RHBDD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RHBDD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rhomboid-related protein 4
translation: MQRREGRVSAGLLLLLYQISQIGLQNIPSVTLAVLALNIFLFLNPVRPLPEVCISVHEGFYKKNWQRLLLSPVHHADDWHLYYNMISMLWKGIMLERKLKSMWFAYIIAVFSVLIGVVYMVLEFMLVKILDDPSYEMNCAVGFSGVLFALKVLNNHYNPGRVSTVFGWPIPSKYACWVELVAIHLISPGTSFAGHLSGILVGLMYTMGPLKKIMKACAGGISSFTDPARPRDYFSEHYGYSGYQYRTPRNYYEYTGGLTEEEQLERAVLNSLNERDLGGAAYSHARRPFGFWLPHEQHSEEEIRRQRLRRFQR
SIO_010081: RHBDD1
subclass of: SO_0000673
so part of: RHBDD1
location: complement(join(490667..490782,504646..504765,508184..508234,509648..509736,512837..512969,515738..516170))
location: region:490667-516170:-1
so has part: feature:515738-516170:-1:exon
so has part: feature:512837-512969:-1:exon
so has part: feature:509648-509736:-1:exon
so has part: feature:508184-508234:-1:exon
so has part: feature:504646-504765:-1:exon
so has part: feature:490667-490782:-1:exon

XP_030312435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:515738-516170:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:512837-512969:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:509648-509736:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:508184-508234:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:504646-504765:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:490667-490782:-1:exon

RHBDD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RHBDD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rhomboid-related protein 4
translation: MQRREGRVSAGLLLLLYQISQIGLQNIPSVTLAVLALNIFLFLNPVRPLPEVCISVHEGFYKKNWQRLLLSPVHHADDWHLYYNMISMLWKGIMLERKLKSMWFAYIIAVFSVLIGVVYMVLEFMLVKILDDPSYEMNCAVGFSGVLFALKVLNNHYNPGRVSTVFGWPIPSKYACWVELVAIHLISPGTSFAGHLSGILVGLMYTMGPLKKIMKACAGGISSFTDPARPRDYFSEHYGYSGYQYRTPRNYYEYTGGLTEEEQLERAVLNSLNERDLGGAAYSHARRPFGFWLPHEQHSEEEIRRQRLRRFQR
SIO_010081: RHBDD1
subclass of: SO_0000673
so part of: RHBDD1
location: complement(join(490667..490782,504646..504765,508184..508234,509648..509736,512837..512969,515738..516170))
location: region:490667-516170:-1
so has part: feature:515738-516170:-1:exon
so has part: feature:512837-512969:-1:exon
so has part: feature:509648-509736:-1:exon
so has part: feature:508184-508234:-1:exon
so has part: feature:504646-504765:-1:exon
so has part: feature:490667-490782:-1:exon

XP_030312436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:515738-516170:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:512837-512969:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:509648-509736:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:508184-508234:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:504646-504765:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:490667-490782:-1:exon

RHBDD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RHBDD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rhomboid-related protein 4
translation: MQRREGRVSAGLLLLLYQISQIGLQNIPSVTLAVLALNIFLFLNPVRPLPEVCISVHEGFYKKNWQRLLLSPVHHADDWHLYYNMISMLWKGIMLERKLKSMWFAYIIAVFSVLIGVVYMVLEFMLVKILDDPSYEMNCAVGFSGVLFALKVLNNHYNPGRVSTVFGWPIPSKYACWVELVAIHLISPGTSFAGHLSGILVGLMYTMGPLKKIMKACAGGISSFTDPARPRDYFSEHYGYSGYQYRTPRNYYEYTGGLTEEEQLERAVLNSLNERDLGGAAYSHARRPFGFWLPHEQHSEEEIRRQRLRRFQR
SIO_010081: RHBDD1
subclass of: SO_0000673
so part of: RHBDD1
location: complement(join(490667..490782,504646..504765,508184..508234,509648..509736,512837..512969,515738..516170))
location: region:490667-516170:-1
so has part: feature:515738-516170:-1:exon
so has part: feature:512837-512969:-1:exon
so has part: feature:509648-509736:-1:exon
so has part: feature:508184-508234:-1:exon
so has part: feature:504646-504765:-1:exon
so has part: feature:490667-490782:-1:exon

XP_030312438.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:515738-516170:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:512837-512969:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:509648-509736:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:508184-508234:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:504646-504765:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:490667-490782:-1:exon

RHBDD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RHBDD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rhomboid-related protein 4
translation: MQRREGRVSAGLLLLLYQISQIGLQNIPSVTLAVLALNIFLFLNPVRPLPEVCISVHEGFYKKNWQRLLLSPVHHADDWHLYYNMISMLWKGIMLERKLKSMWFAYIIAVFSVLIGVVYMVLEFMLVKILDDPSYEMNCAVGFSGVLFALKVLNNHYNPGRVSTVFGWPIPSKYACWVELVAIHLISPGTSFAGHLSGILVGLMYTMGPLKKIMKACAGGISSFTDPARPRDYFSEHYGYSGYQYRTPRNYYEYTGGLTEEEQLERAVLNSLNERDLGGAAYSHARRPFGFWLPHEQHSEEEIRRQRLRRFQR
SIO_010081: RHBDD1
subclass of: SO_0000673
so part of: RHBDD1
location: complement(join(490667..490782,504646..504765,508184..508234,509648..509736,512837..512969,515738..516170))
location: region:490667-516170:-1
so has part: feature:515738-516170:-1:exon
so has part: feature:512837-512969:-1:exon
so has part: feature:509648-509736:-1:exon
so has part: feature:508184-508234:-1:exon
so has part: feature:504646-504765:-1:exon
so has part: feature:490667-490782:-1:exon

XP_030312439.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:515738-516170:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:512837-512969:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:509648-509736:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:508184-508234:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:504646-504765:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:490667-490782:-1:exon

IRS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: IRS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(755979..809670)
location: region:755979-809670:-1
so has part: feature:755979-809670:-1:exon
subclass of: SO_0000010

103527327
type: Gene
SIO_000068: ncbigene

position:755979:-1
position: 755979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:809670:-1
position: 809670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:755979-809670:-1:exon

IRS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: IRS1
product: insulin receptor substrate 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030456228.1
SIO_010081: IRS1
subclass of: SO_0000673
so part of: IRS1
location: complement(join(755979..757024,805464..809670))
location: region:755979-809670:-1
so has part: feature:805464-809670:-1:exon
so has part: feature:755979-757024:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:805464-809670:-1:exon

position:805464:-1
position: 805464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:755979-757024:-1:exon

position:757024:-1
position: 757024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IRS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: IRS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: insulin receptor substrate 1
translation: MASPTDNNEGFFSDVRKVGYLRKPKSMHKRFFVLRAASESGPARLEYYENEKKWRHKSGAPKRSIPLESCFNINKRADSKNKHLVALYTKDEHFAIAADSEPEQESWYQALLQLHNRAKGHHHLHHHHHHHHSDVTFGGSNVALGEAGEDSYGEVAPGPAFKEVWQVILKPKGLGQTKNLIGIYRLCLTNKTISFVKLNSDAAAVVLQLLNIRRCGHSENFFFIEVGRSAVTGPGEFWMQVDDSVVAQNMHETILEAMRAMSEEFRPRSKSQSSSNCSNPISVPLRSRHHVNNPPPSQVGLSRRSRTESVTATSPAGGGGTGGKPSSFRVRASSDGEGTMSRPASVDGSPVSPSTNRTHSHRHRGNSRLHPPLNHSRSIPMPSSRCSPSATSPVSLSSSSTSGHGSTSDCLFPRRSSASVSGSPSDGGFISSDEYGSSPCDFRSSFRSVTPDSLGHTPPARGDEELNYICMGGKATSSCCSLAAPNGHFVPRSCHPQQQPRYPGTPGCPRGGSEEVADLEKAFRKRTHSAGTSPTISHQKTPSQSSVASIEEYTEMLPSYPCGSSRMPSYRHLAFVPTHSYPEECLEMHHLDSGHHRTNSAPHTDDGYMPMSPGVAPVPSGGGPSKGGDYMPMSPKSVSAPQQIINPGRGGRHPPATVDSNGYMMMSPSGSYSPDNGSAGYGKIWTNGAGHHPKLSVESNEGKLPCSGSDYINMSPASGSTTSTPPDCYFGGPGQPGVEEAAAVGHHKPIYSYFSLPRSFKHVHRRGGSGLAGPGDEGSPQTRLALGSSRLLYAAEDSSSSTSSDSLGGGGGPEAGPPPQAQPPRKVDTAVQTKGRLARPTRLSLGGPKASTLPRAREQPPLLLPPEPKSPGEYVNIEFIAGEKPAFPSAVLGLSLPPPPGNEGAEEYMNMELGPPRAPCPAGFAATRSASTARPGRGAAPGGRDYVTMQLGGAAAGGSCSDCADSPSPCSPALLLSYADVRAGRSVAEKPPPVAPAATTTASPELPRPPAELSAAPPRSSSLLGGPGAGSAFTRVSLSPGRNQSAKVIRADPQGGRRRHSSETFSSTPTAARGAAGGGGPGAPFPCGGAGGAEEVKRHSSASFENVWLRPASGEAASAPAARREPGVAPAPENGLNYIDLDLVKDFSHRRRHHHLYPPAEGSALPGGKQLPPPKPPGQPRGSGHSSDDLSAYASISFQKREEM
SIO_010081: IRS1
subclass of: SO_0000673
so part of: IRS1
location: complement(805487..809101)
location: region:805487-809101:-1
so has part: feature:805487-809101:-1:exon

XP_030312088.1
type: Protein
SIO_000068: ncbiprotein

position:805487:-1
position: 805487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:809101:-1
position: 809101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:805487-809101:-1:exon

NYAP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: NYAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(892247..1021738)
location: region:892247-1021738:-1
so has part: feature:892247-1021738:-1:exon
subclass of: SO_0000010

103527313
type: Gene
SIO_000068: ncbigene

position:892247:-1
position: 892247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1021738:-1
position: 1021738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:892247-1021738:-1:exon

NYAP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NYAP2
product: neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 long SRA read
transcript id: XM_030456322.1
SIO_010081: NYAP2
subclass of: SO_0000673
so part of: NYAP2
location: complement(join(892247..896248,917805..917908,926092..926304,941908..943005,948699..948773,961082..961380,1014110..1014352,1020646..1021147,1021397..1021535))
location: region:892247-1021535:-1
so has part: feature:1021397-1021535:-1:exon
so has part: feature:1020646-1021147:-1:exon
so has part: feature:1014110-1014352:-1:exon
so has part: feature:961082-961380:-1:exon
so has part: feature:948699-948773:-1:exon
so has part: feature:941908-943005:-1:exon
so has part: feature:926092-926304:-1:exon
so has part: feature:917805-917908:-1:exon
so has part: feature:892247-896248:-1:exon

position:1021535:-1
position: 1021535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1021397-1021535:-1:exon

position:1021397:-1
position: 1021397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1020646-1021147:-1:exon

position:1020646:-1
position: 1020646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1021147:-1
position: 1021147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1014110-1014352:-1:exon

position:1014110:-1
position: 1014110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1014352:-1
position: 1014352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:961082-961380:-1:exon

position:961082:-1
position: 961082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:961380:-1
position: 961380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:948699-948773:-1:exon

position:948699:-1
position: 948699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:948773:-1
position: 948773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:941908-943005:-1:exon

position:941908:-1
position: 941908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:943005:-1
position: 943005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:926092-926304:-1:exon

position:926092:-1
position: 926092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:926304:-1
position: 926304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:917805-917908:-1:exon

position:917805:-1
position: 917805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:917908:-1
position: 917908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:892247-896248:-1:exon

position:896248:-1
position: 896248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NYAP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NYAP2
product: neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 long SRA read, 3 Proteins
transcript id: XM_030456324.1
SIO_010081: NYAP2
subclass of: SO_0000673
so part of: NYAP2
location: complement(join(892253..896248,917805..917908,926092..926304,941908..943005,961082..961380,1014110..1014352,1021397..1021738))
location: region:892253-1021738:-1
so has part: feature:1021397-1021738:-1:exon
so has part: feature:1014110-1014352:-1:exon
so has part: feature:961082-961380:-1:exon
so has part: feature:941908-943005:-1:exon
so has part: feature:926092-926304:-1:exon
so has part: feature:917805-917908:-1:exon
so has part: feature:892253-896248:-1:exon

position:892253:-1
position: 892253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1021397-1021738:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1014110-1014352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:961082-961380:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:941908-943005:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:926092-926304:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:917805-917908:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:892253-896248:-1:exon

NYAP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NYAP2
product: neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 long SRA read, 5 Proteins
transcript id: XM_030456323.1
SIO_010081: NYAP2
subclass of: SO_0000673
so part of: NYAP2
location: complement(join(892256..896248,917805..917908,926092..926304,941908..943005,961082..961380,1014110..1014352,1020646..1021147,1021397..1021552))
location: region:892256-1021552:-1
so has part: feature:1021397-1021552:-1:exon
so has part: feature:1020646-1021147:-1:exon
so has part: feature:1014110-1014352:-1:exon
so has part: feature:961082-961380:-1:exon
so has part: feature:941908-943005:-1:exon
so has part: feature:926092-926304:-1:exon
so has part: feature:917805-917908:-1:exon
so has part: feature:892256-896248:-1:exon

position:892256:-1
position: 892256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1021552:-1
position: 1021552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1021397-1021552:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1020646-1021147:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1014110-1014352:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:961082-961380:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:941908-943005:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:926092-926304:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:917805-917908:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:892256-896248:-1:exon

NYAP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NYAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 2 isoform X2
translation: MMSSNQEEVTLGAFLQYIEDMGMKAYDGLVIQNASDIARENDRMRNETNLAYLKEKSEKRRKQEEAIKRIGGEVVRGNEGSYVGKHFRMGFMTMPAPQDRLPHPCSSGFTVRSQSLHSVGGTDDESSSSRKQPPPKPKRDPNTKLSTSSETVNTGTTSKSGKLPDRTEVSAKPRPHSDEYTKKIPPPKPKRNPNTQLSTSFDETYIKKHGPMKTSLTRDASLSQVSSPAPDTEEEEPVYIEMVGNILRDFKKDEDDQSEAVYEEMKYPIFDDVGQDSKCQCEYDHHTCSSQCATPTVPDLDFTKSSVPSTPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVQCSPNSDESPLTPLEVTKLPVLENVSYIKQQAGASPSSLPPHTPGHQKLEKDQTISHGTSTPGHTSSPPHPSTLYRTQSPHGYPKSHSASPSPVSMGRSLTPLSLKRPPPYDSVHSGSLSRSSPSVPHSTTRNTLQEGGKMVNASVSTYGSSSQSGSRSRTPTSPLEELTSLFTSGRSLLRKSSSGRRSKEPAEKPLDELKIRSHSTEPLPKLENKERGGHHGTASSREPGKAQEWDGTPGPPVVSSRLGRSSVSPTMLAGSNSSEPKSSCRLGRSASTSGVPPPSVTPLRQPSDLQPSQVTCMQWLQGDHTMLDMIEKKRCLCKEIKARQKSEKGLCKQESMPILPSWKKNTGTKKYSPPPYSKQQTVFWDTAI
SIO_010081: NYAP2
subclass of: SO_0000673
so part of: NYAP2
location: complement(join(896021..896248,917805..917908,926092..926304,941908..943005,961082..961380,1014110..1014315))
location: region:896021-1014315:-1
so has part: feature:1014110-1014315:-1:exon
so has part: feature:961082-961380:-1:exon
so has part: feature:941908-943005:-1:exon
so has part: feature:926092-926304:-1:exon
so has part: feature:917805-917908:-1:exon
so has part: feature:896021-896248:-1:exon

XP_030312183.1
type: Protein
SIO_000068: ncbiprotein

position:896021:-1
position: 896021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1014315:-1
position: 1014315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1014110-1014315:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:961082-961380:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:941908-943005:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:926092-926304:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:917805-917908:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:896021-896248:-1:exon

NYAP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NYAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 2 isoform X2
translation: MMSSNQEEVTLGAFLQYIEDMGMKAYDGLVIQNASDIARENDRMRNETNLAYLKEKSEKRRKQEEAIKRIGGEVVRGNEGSYVGKHFRMGFMTMPAPQDRLPHPCSSGFTVRSQSLHSVGGTDDESSSSRKQPPPKPKRDPNTKLSTSSETVNTGTTSKSGKLPDRTEVSAKPRPHSDEYTKKIPPPKPKRNPNTQLSTSFDETYIKKHGPMKTSLTRDASLSQVSSPAPDTEEEEPVYIEMVGNILRDFKKDEDDQSEAVYEEMKYPIFDDVGQDSKCQCEYDHHTCSSQCATPTVPDLDFTKSSVPSTPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVQCSPNSDESPLTPLEVTKLPVLENVSYIKQQAGASPSSLPPHTPGHQKLEKDQTISHGTSTPGHTSSPPHPSTLYRTQSPHGYPKSHSASPSPVSMGRSLTPLSLKRPPPYDSVHSGSLSRSSPSVPHSTTRNTLQEGGKMVNASVSTYGSSSQSGSRSRTPTSPLEELTSLFTSGRSLLRKSSSGRRSKEPAEKPLDELKIRSHSTEPLPKLENKERGGHHGTASSREPGKAQEWDGTPGPPVVSSRLGRSSVSPTMLAGSNSSEPKSSCRLGRSASTSGVPPPSVTPLRQPSDLQPSQVTCMQWLQGDHTMLDMIEKKRCLCKEIKARQKSEKGLCKQESMPILPSWKKNTGTKKYSPPPYSKQQTVFWDTAI
SIO_010081: NYAP2
subclass of: SO_0000673
so part of: NYAP2
location: complement(join(896021..896248,917805..917908,926092..926304,941908..943005,961082..961380,1014110..1014315))
location: region:896021-1014315:-1
so has part: feature:1014110-1014315:-1:exon
so has part: feature:961082-961380:-1:exon
so has part: feature:941908-943005:-1:exon
so has part: feature:926092-926304:-1:exon
so has part: feature:917805-917908:-1:exon
so has part: feature:896021-896248:-1:exon

XP_030312184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1014110-1014315:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:961082-961380:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:941908-943005:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:926092-926304:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:917805-917908:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:896021-896248:-1:exon

NYAP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NYAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 2 isoform X1
translation: MMSSNQEEVTLGAFLQYIEDMGMKAYDGLVIQNASDIARENDRMRNETNLAYLKEKSEKRRKQEEAIKRIGGEVVRGNEGSYVGKHFRMGFMTMPAPQDRLPHPCSSGFTVRSQSLHSVGGTDDESSSSRKQPPPKPKRDPNTKLSTSSETVNTGTTSKSGKLPDRTEASLRQGRERTCDHEDNVISVASCDRVSAKPRPHSDEYTKKIPPPKPKRNPNTQLSTSFDETYIKKHGPMKTSLTRDASLSQVSSPAPDTEEEEPVYIEMVGNILRDFKKDEDDQSEAVYEEMKYPIFDDVGQDSKCQCEYDHHTCSSQCATPTVPDLDFTKSSVPSTPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVQCSPNSDESPLTPLEVTKLPVLENVSYIKQQAGASPSSLPPHTPGHQKLEKDQTISHGTSTPGHTSSPPHPSTLYRTQSPHGYPKSHSASPSPVSMGRSLTPLSLKRPPPYDSVHSGSLSRSSPSVPHSTTRNTLQEGGKMVNASVSTYGSSSQSGSRSRTPTSPLEELTSLFTSGRSLLRKSSSGRRSKEPAEKPLDELKIRSHSTEPLPKLENKERGGHHGTASSREPGKAQEWDGTPGPPVVSSRLGRSSVSPTMLAGSNSSEPKSSCRLGRSASTSGVPPPSVTPLRQPSDLQPSQVTCMQWLQGDHTMLDMIEKKRCLCKEIKARQKSEKGLCKQESMPILPSWKKNTGTKKYSPPPYSKQQTVFWDTAI
SIO_010081: NYAP2
subclass of: SO_0000673
so part of: NYAP2
location: complement(join(896021..896248,917805..917908,926092..926304,941908..943005,948699..948773,961082..961380,1014110..1014315))
location: region:896021-1014315:-1
so has part: feature:1014110-1014315:-1:exon
so has part: feature:961082-961380:-1:exon
so has part: feature:948699-948773:-1:exon
so has part: feature:941908-943005:-1:exon
so has part: feature:926092-926304:-1:exon
so has part: feature:917805-917908:-1:exon
so has part: feature:896021-896248:-1:exon

XP_030312182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1014110-1014315:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:961082-961380:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:948699-948773:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:941908-943005:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:926092-926304:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:917805-917908:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:896021-896248:-1:exon

DOCK10
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: DOCK10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1075754..1208811
location: region:1075754-1208811:1
so has part: feature:1075754-1208811:1:exon
subclass of: SO_0000010

103527328
type: Gene
SIO_000068: ncbigene

position:1075754:1
position: 1075754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1208811:1
position: 1208811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1075754-1208811:1:exon

DOCK10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: DOCK10
product: dedicator of cytokinesis 10, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 8 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030455934.1
SIO_010081: DOCK10
subclass of: SO_0000673
so part of: DOCK10
location: join(1075754..1075873,1120165..1120284,1127905..1127994,1132446..1132528,1135602..1135674,1136000..1136131,1136385..1136519,1139984..1140167,1141719..1141804,1142235..1142318,1143417..1143572,1144836..1145057,1145758..1145880,1146451..1146533,1152268..1152390,1153683..1153762,1156949..1157136,1157756..1157821,1158670..1158762,1160617..1160740,1160892..1161013,1161692..1161778,1162319..1162411,1163493..1163611,1166176..1166245,1168995..1169108,1170386..1170457,1171067..1171213,1173560..1173643,1176367..1176463,1176977..1177021,1177475..1177650,1177779..1177895,1179403..1179514,1180199..1180320,1180406..1180520,1180688..1180754,1181511..1181558,1182217..1182318,1184494..1184622,1185273..1185381,1186067..1186204,1187728..1187910,1188482..1188592,1189943..1190158,1190843..1190900,1191225..1191323,1192972..1193078,1193562..1193684,1194544..1194657,1200019..1200165,1200702..1200912,1203132..1203322,1203923..1204023,1204347..1204485,1208112..1208811)
location: region:1075754-1208811:1
so has part: feature:1075754-1075873:1:exon
so has part: feature:1120165-1120284:1:exon
so has part: feature:1127905-1127994:1:exon
so has part: feature:1132446-1132528:1:exon
so has part: feature:1135602-1135674:1:exon
so has part: feature:1136000-1136131:1:exon
so has part: feature:1136385-1136519:1:exon
so has part: feature:1139984-1140167:1:exon
so has part: feature:1141719-1141804:1:exon
so has part: feature:1142235-1142318:1:exon
so has part: feature:1143417-1143572:1:exon
so has part: feature:1144836-1145057:1:exon
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SIO_000300: 35
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DOCK10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: DOCK10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dedicator of cytokinesis protein 10 isoform X3
translation: MAVERTRRFTRSLLRPGQAAEQRNSAASAAAAASGRLQLRQEKPRLLEPLDYEAVITEIEKNIGDNPFKDLILFPDDDFSTDTISLEIRTLYPSVPEDAEQKAENLFVKEACKYYNSQWHVVTYKYEQYSEDFRHLPQNECRAEKLPSHCFEIDHEDVDKDEDTTSHSSSKGGGGGGGGLGAGVYKSGWLYKGNFNSTVNNSITVRSFKKRYFQLTQLSDNSYIMNFYKDEKISKEPKGCIFLDSCTGVVQNNRLRKHAFELKMNDLTYFVLAAENEQDMDDWIFTLNKILQINPEGTIQERKSADLTDLKLDPAEVAMNYDCSQEETDSSENTLHPDFAKYITETEETVKASRNTERLNLFSLDPDIASMNPQKKEFPGTNSVIKPFEGKPAKRILITCKSLSLNLQACVTENENDPSTNVEPFFVSVALYDVRDGKKISADFHVDLNHPLVRQMISRSSFSLENGTGENTDSNEMEEPQVKGFPEEWLKYPKQALFSISNPHSEIVLVAKIEKVLTGNIASSAEPYIKNPDSFKCAQKVLKSNKQFCSKLGKYRMPFAWSVRPVFKDNQGNVDRESRFSPLFRQESNKISMEDLIKLIAEYRRAEKISKIQTIPGCLEIAVDCVPLEHPNCVTSSFIPIKPFNDIKEHQPTVEVEEFVQESTKYSRPYRVYKNQIYIYPKHLKYDSQKYFNKARNITVCIEFKSSDEEGSKPLKCIYGKPGGALFTTAAYTAVLHHSQNPDFYDEVKIELPTQLHKKHHILFSFYHVTCDINAKANAKKKEALETPVGYAWLPLLKDAQLASQEHNVPVASSLPPNYLSLQEPASGKQLGCDVKWVDSGKPLFKVSTLVVSTVNTQDPYLNNFFYQCQEREKDLSQPPTSNFINSCKNLLRIEKIHVIMNFLPVVLNQLFWVLVQNSDDEVTTAVTRVLTNIVAKCHEEQLDNCINSYVTYVFRTKSFEDRTVHEELTKNMTGLLKSNDQVTVRQVLKHSWFFFAVILKSMAQHLVDTNKTKVSRTQRFPDSFQTDLDTLVMVVADHVVWKYREALEETRNANYSIAKFLKRCFTFMDRGFVFKLVNNYISMFGTGDGKTVHQFKFDFLQEVCHHEHFIPLCLPIKSSNIPDLITPSESTQEYRTSDIPEYTLTNEFCHKHFLIGVLLREVGFALQEDQDIRHLALAVLKNLMAKHSFDDRYTEPAKQAQIANLYMPLYGMLLDNMPRIYMKDMFLFNINASNQGSRDDLSTAGGFQSQTALKHANSVDTSFSKDVLNSIAAFSSIAISAANHADSRASLASLESNPSTNEKNSERTDTCEKIMRPLSLIGSTLRFDKLDQAETRSLLMCFLHIMKTISEDALISYWLRAPFSEITDFFSILEVCLQNFRYLGKRNIVRKIAAAFKFVQATQNNGTLKGSNSSGQASGLLSQWMHSTSSHDGHKHHRSQTLPIIRGKNALSNPKLLQMIDNSTASNSTETDIVQYVDTEANIATEVSLTILDLLCLYTLNHQRQLQQSDCQNALMKKVFDTHMLFLQINQSAAALKHVFAALRLFVGKFPSAFFQGQADLCGSLCYEILKCCNHRSRSTQTEASALLYFFMRKNFEFNKQKSIVRSHLQLIKAVSQLIADAGIGGSRFQHSLAIINNFANGDKQMKNVNFPAEVKDLTKRIRTVLMATAQMKEHEKDPEMLVDLQYSLANSYASTPELRRTWLESMAKIHARNGDLSEAAMCYIHIAALIAEYLKRKGYWKMEKICTSRMLLEDGQVSDSNVLLTTHTGGSLFSMGWPAFLSITPNIKEEGAMKEDSGMQDTPYNENVLVEQLELCVEYLWKSERYELIAEVNKPIIAVFEKQRDFKRLSDLYYDIHRSYLKVAEVVNSEKRLFGRYYRVAFYGQGFFEEEEGKEYIYKEPKLTGLSEISQRLMKLYADKFGIDNVKIIQDSNKVNPKDLDPKYAYIQVTYVTPFFEEKEAEDRKTDFEMHHNINRFVFETPFTLSGKKHGGVEEQCK…
SIO_010081: DOCK10
subclass of: SO_0000673
so part of: DOCK10
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XP_030311794.1
type: Protein
SIO_000068: ncbiprotein

position:1208231:1
position: 1208231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
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urn:…
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DOCK10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: DOCK10
product: dedicator of cytokinesis 10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 7 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030455932.1
SIO_010081: DOCK10
subclass of: SO_0000673
so part of: DOCK10
location: join(1097291..1097455,1120165..1120284,1127905..1127994,1132446..1132528,1135602..1135674,1136000..1136131,1136385..1136519,1139984..1140167,1141719..1141804,1142235..1142318,1143417..1143572,1144836..1145057,1145758..1145880,1146451..1146533,1152268..1152390,1153683..1153762,1156949..1157136,1157756..1157821,1158670..1158762,1160617..1160740,1160892..1161013,1161692..1161778,1162319..1162411,1163493..1163611,1166176..1166245,1168995..1169108,1170386..1170457,1171067..1171213,1173560..1173643,1176367..1176463,1176977..1177021,1177475..1177650,1177779..1177895,1179403..1179514,1180199..1180320,1180406..1180520,1180688..1180754,1181511..1181558,1182217..1182318,1184494..1184622,1185273..1185381,1186067..1186204,1187728..1187910,1188482..1188592,1189943..1190158,1190843..1190900,1191225..1191323,1192972..1193078,1193562..1193684,1194544..1194657,1200019..1200165,1200702..1200912,1203132..1203322,1203923..1204023,1204347..1204485,1208112..1208811)
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position:1097291:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
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DOCK10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: DOCK10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dedicator of cytokinesis protein 10 isoform X1
translation: MGCAASIVLLQAFRSVVQRNCPHICRRRRREELSHEILPLDSNDEMSRPRTLIIMQEKPRLLEPLDYEAVITEIEKNIGDNPFKDLILFPDDDFSTDTISLEIRTLYPSVPEDAEQKAENLFVKEACKYYNSQWHVVTYKYEQYSEDFRHLPQNECRAEKLPSHCFEIDHEDVDKDEDTTSHSSSKGGGGGGGGLGAGVYKSGWLYKGNFNSTVNNSITVRSFKKRYFQLTQLSDNSYIMNFYKDEKISKEPKGCIFLDSCTGVVQNNRLRKHAFELKMNDLTYFVLAAENEQDMDDWIFTLNKILQINPEGTIQERKSADLTDLKLDPAEVAMNYDCSQEETDSSENTLHPDFAKYITETEETVKASRNTERLNLFSLDPDIASMNPQKKEFPGTNSVIKPFEGKPAKRILITCKSLSLNLQACVTENENDPSTNVEPFFVSVALYDVRDGKKISADFHVDLNHPLVRQMISRSSFSLENGTGENTDSNEMEEPQVKGFPEEWLKYPKQALFSISNPHSEIVLVAKIEKVLTGNIASSAEPYIKNPDSFKCAQKVLKSNKQFCSKLGKYRMPFAWSVRPVFKDNQGNVDRESRFSPLFRQESNKISMEDLIKLIAEYRRAEKISKIQTIPGCLEIAVDCVPLEHPNCVTSSFIPIKPFNDIKEHQPTVEVEEFVQESTKYSRPYRVYKNQIYIYPKHLKYDSQKYFNKARNITVCIEFKSSDEEGSKPLKCIYGKPGGALFTTAAYTAVLHHSQNPDFYDEVKIELPTQLHKKHHILFSFYHVTCDINAKANAKKKEALETPVGYAWLPLLKDAQLASQEHNVPVASSLPPNYLSLQEPASGKQLGCDVKWVDSGKPLFKVSTLVVSTVNTQDPYLNNFFYQCQEREKDLSQPPTSNFINSCKNLLRIEKIHVIMNFLPVVLNQLFWVLVQNSDDEVTTAVTRVLTNIVAKCHEEQLDNCINSYVTYVFRTKSFEDRTVHEELTKNMTGLLKSNDQVTVRQVLKHSWFFFAVILKSMAQHLVDTNKTKVSRTQRFPDSFQTDLDTLVMVVADHVVWKYREALEETRNANYSIAKFLKRCFTFMDRGFVFKLVNNYISMFGTGDGKTVHQFKFDFLQEVCHHEHFIPLCLPIKSSNIPDLITPSESTQEYRTSDIPEYTLTNEFCHKHFLIGVLLREVGFALQEDQDIRHLALAVLKNLMAKHSFDDRYTEPAKQAQIANLYMPLYGMLLDNMPRIYMKDMFLFNINASNQGSRDDLSTAGGFQSQTALKHANSVDTSFSKDVLNSIAAFSSIAISAANHADSRASLASLESNPSTNEKNSERTDTCEKIMRPLSLIGSTLRFDKLDQAETRSLLMCFLHIMKTISEDALISYWLRAPFSEITDFFSILEVCLQNFRYLGKRNIVRKIAAAFKFVQATQNNGTLKGSNSSGQASGLLSQWMHSTSSHDGHKHHRSQTLPIIRGKNALSNPKLLQMIDNSTASNSTETDIVQYVDTEANIATEVSLTILDLLCLYTLNHQRQLQQSDCQNALMKKVFDTHMLFLQINQSAAALKHVFAALRLFVGKFPSAFFQGQADLCGSLCYEILKCCNHRSRSTQTEASALLYFFMRKNFEFNKQKSIVRSHLQLIKAVSQLIADAGIGGSRFQHSLAIINNFANGDKQMKNVNFPAEVKDLTKRIRTVLMATAQMKEHEKDPEMLVDLQYSLANSYASTPELRRTWLESMAKIHARNGDLSEAAMCYIHIAALIAEYLKRKGYWKMEKICTSRMLLEDGQVSDSNVLLTTHTGGSLFSMGWPAFLSITPNIKEEGAMKEDSGMQDTPYNENVLVEQLELCVEYLWKSERYELIAEVNKPIIAVFEKQRDFKRLSDLYYDIHRSYLKVAEVVNSEKRLFGRYYRVAFYGQGFFEEEEGKEYIYKEPKLTGLSEISQRLMKLYADKFGIDNVKIIQDSNKVNPKDLDPKYAYIQVTYVTPFFEEKEAEDRKTDFEMHHNINRFVFETPF…
SIO_010081: DOCK10
subclass of: SO_0000673
so part of: DOCK10
location: join(1097291..1097455,1120165..1120284,1127905..1127994,1132446..1132528,1135602..1135674,1136000..1136131,1136385..1136519,1139984..1140167,1141719..1141804,1142235..1142318,1143417..1143572,1144836..1145057,1145758..1145880,1146451..1146533,1152268..1152390,1153683..1153762,1156949..1157136,1157756..1157821,1158670..1158762,1160617..1160740,1160892..1161013,1161692..1161778,1162319..1162411,1163493..1163611,1166176..1166245,1168995..1169108,1170386..1170457,1171067..1171213,1173560..1173643,1176367..1176463,1176977..1177021,1177475..1177650,1177779..1177895,1179403..1179514,1180199..1180320,1180406..1180520,1180688..1180754,1181511..1181558,1182217..1182318,1184494..1184622,1185273..1185381,1186067..1186204,1187728..1187910,1188482..1188592,1189943..1190158,1190843..1190900,1191225..1191323,1192972..1193078,1193562..1193684,1194544..1194657,1200019..1200165,1200702..1200912,1203132..1203322,1203923..1204023,1204347..1204485,1208112..1208231)
location: region:1097291-1208231:1
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so has part: feature:1173560-1173643:1:exon
so has part: feature:1176367-1176463:1:exon
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so has part: feature:1177475-1177650:1:exon
so has part: feature:1177779-1177895:1:exon
so has part: feature:1179403-1179514:1:exon
so has part: feature:1180199-1180320:1:exon
so has part: feature:1180406-1180520:1:exon
so has part: feature:1180688-1180754:1:exon
so has part: feature:1181511-1181558:1:exon
so has part: feature:1182217-1182318:1:exon
so has part: feature:1184494-1184622:1:exon
so has part: feature:1185273-1185381:1:exon
so has part: feature:1186067-1186204:1:exon
so has part: feature:1187728-1187910:1:exon
so has part: feature:1188482-1188592:1:exon
so has part: feature:1189943-1190158:1:exon
so has part: feature:1190843-1190900:1:exon
so has part: feature:1191225-1191323:1:exon
so has part: feature:1192972-1193078:1:exon
so has part: feature:1193562-1193684:1:exon
so has part: feature:1194544-1194657:1:exon
so has part: feature:1200019-1200165:1:exon
so has part: feature:1200702-1200912:1:exon
so has part: feature:1203132-1203322:1:exon
so has part: feature:1203923-1204023:1:exon
so has part: feature:1204347-1204485:1:exon
so has part: feature:1208112-1208231:1:exon

XP_030311792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1097291-1097455:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1120165-1120284:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1127905-1127994:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132446-1132528:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1135602-1135674:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1136000-1136131:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1136385-1136519:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1139984-1140167:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1141719-1141804:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1142235-1142318:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1143417-1143572:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1144836-1145057:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1145758-1145880:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1146451-1146533:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1152268-1152390:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1153683-1153762:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1156949-1157136:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1157756-1157821:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1158670-1158762:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1160617-1160740:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1160892-1161013:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1161692-1161778:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1162319-1162411:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1163493-1163611:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1166176-1166245:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1168995-1169108:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1170386-1170457:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1171067-1171213:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1173560-1173643:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1176367-1176463:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1176977-1177021:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1177475-1177650:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1177779-1177895:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1179403-1179514:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1180199-1180320:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1180406-1180520:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1180688-1180754:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1181511-1181558:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1182217-1182318:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1184494-1184622:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1185273-1185381:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1186067-1186204:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1187728-1187910:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1188482-1188592:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1189943-1190158:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1190843-1190900:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1191225-1191323:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1192972-1193078:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1193562-1193684:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1194544-1194657:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1200019-1200165:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1200702-1200912:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1203132-1203322:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1203923-1204023:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1204347-1204485:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1208112-1208231:1:exon

DOCK10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: DOCK10
product: dedicator of cytokinesis 10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 6 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030455933.1
SIO_010081: DOCK10
subclass of: SO_0000673
so part of: DOCK10
location: join(1110587..1110688,1120165..1120284,1127905..1127994,1132446..1132528,1135602..1135674,1136000..1136131,1136385..1136519,1139984..1140167,1141719..1141804,1142235..1142318,1143417..1143572,1144836..1145057,1145758..1145880,1146451..1146533,1152268..1152390,1153683..1153762,1156949..1157136,1157756..1157821,1158670..1158762,1160617..1160740,1160892..1161013,1161692..1161778,1162319..1162411,1163493..1163611,1166176..1166245,1168995..1169108,1170386..1170457,1171067..1171213,1173560..1173643,1176367..1176463,1176977..1177021,1177475..1177650,1177779..1177895,1179403..1179514,1180199..1180320,1180406..1180520,1180688..1180754,1181511..1181558,1182217..1182318,1184494..1184622,1185273..1185381,1186067..1186204,1187728..1187910,1188482..1188592,1189943..1190158,1190843..1190900,1191225..1191323,1192972..1193078,1193562..1193684,1194544..1194657,1200019..1200165,1200702..1200912,1203132..1203322,1203923..1204023,1204347..1204485,1208112..1208811)
location: region:1110587-1208811:1
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so has part: feature:1204347-1204485:1:exon
so has part: feature:1208112-1208811:1:exon

position:1110587:1
position: 1110587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1110587-1110688:1:exon

position:1110688:1
position: 1110688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1120165-1120284:1:exon

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SIO_000300: 3
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SIO_000628: feature:1132446-1132528:1:exon

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SIO_000300: 5
SIO_000628: feature:1135602-1135674:1:exon

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SIO_000628: feature:1136000-1136131:1:exon

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SIO_000628: feature:1136385-1136519:1:exon

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SIO_000628: feature:1139984-1140167:1:exon

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SIO_000628: feature:1160892-1161013:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1161692-1161778:1:exon

urn:…
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SIO_000628: feature:1162319-1162411:1:exon

urn:…
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SIO_000628: feature:1163493-1163611:1:exon

urn:…
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SIO_000628: feature:1166176-1166245:1:exon

urn:…
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SIO_000628: feature:1168995-1169108:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1170386-1170457:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1171067-1171213:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1173560-1173643:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1176367-1176463:1:exon

urn:…
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SIO_000628: feature:1176977-1177021:1:exon

urn:…
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SIO_000628: feature:1177475-1177650:1:exon

urn:…
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SIO_000628: feature:1177779-1177895:1:exon

urn:…
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urn:…
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SIO_000628: feature:1180688-1180754:1:exon

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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 44
SIO_000628: feature:1188482-1188592:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1189943-1190158:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1190843-1190900:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1191225-1191323:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1192972-1193078:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1193562-1193684:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1194544-1194657:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1200019-1200165:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1200702-1200912:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1203132-1203322:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1203923-1204023:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1204347-1204485:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1208112-1208811:1:exon

DOCK10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: DOCK10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dedicator of cytokinesis protein 10 isoform X2
translation: MSFRGRFRKQPSELRRKGRAAMRVDQAEIHRLSCQEKPRLLEPLDYEAVITEIEKNIGDNPFKDLILFPDDDFSTDTISLEIRTLYPSVPEDAEQKAENLFVKEACKYYNSQWHVVTYKYEQYSEDFRHLPQNECRAEKLPSHCFEIDHEDVDKDEDTTSHSSSKGGGGGGGGLGAGVYKSGWLYKGNFNSTVNNSITVRSFKKRYFQLTQLSDNSYIMNFYKDEKISKEPKGCIFLDSCTGVVQNNRLRKHAFELKMNDLTYFVLAAENEQDMDDWIFTLNKILQINPEGTIQERKSADLTDLKLDPAEVAMNYDCSQEETDSSENTLHPDFAKYITETEETVKASRNTERLNLFSLDPDIASMNPQKKEFPGTNSVIKPFEGKPAKRILITCKSLSLNLQACVTENENDPSTNVEPFFVSVALYDVRDGKKISADFHVDLNHPLVRQMISRSSFSLENGTGENTDSNEMEEPQVKGFPEEWLKYPKQALFSISNPHSEIVLVAKIEKVLTGNIASSAEPYIKNPDSFKCAQKVLKSNKQFCSKLGKYRMPFAWSVRPVFKDNQGNVDRESRFSPLFRQESNKISMEDLIKLIAEYRRAEKISKIQTIPGCLEIAVDCVPLEHPNCVTSSFIPIKPFNDIKEHQPTVEVEEFVQESTKYSRPYRVYKNQIYIYPKHLKYDSQKYFNKARNITVCIEFKSSDEEGSKPLKCIYGKPGGALFTTAAYTAVLHHSQNPDFYDEVKIELPTQLHKKHHILFSFYHVTCDINAKANAKKKEALETPVGYAWLPLLKDAQLASQEHNVPVASSLPPNYLSLQEPASGKQLGCDVKWVDSGKPLFKVSTLVVSTVNTQDPYLNNFFYQCQEREKDLSQPPTSNFINSCKNLLRIEKIHVIMNFLPVVLNQLFWVLVQNSDDEVTTAVTRVLTNIVAKCHEEQLDNCINSYVTYVFRTKSFEDRTVHEELTKNMTGLLKSNDQVTVRQVLKHSWFFFAVILKSMAQHLVDTNKTKVSRTQRFPDSFQTDLDTLVMVVADHVVWKYREALEETRNANYSIAKFLKRCFTFMDRGFVFKLVNNYISMFGTGDGKTVHQFKFDFLQEVCHHEHFIPLCLPIKSSNIPDLITPSESTQEYRTSDIPEYTLTNEFCHKHFLIGVLLREVGFALQEDQDIRHLALAVLKNLMAKHSFDDRYTEPAKQAQIANLYMPLYGMLLDNMPRIYMKDMFLFNINASNQGSRDDLSTAGGFQSQTALKHANSVDTSFSKDVLNSIAAFSSIAISAANHADSRASLASLESNPSTNEKNSERTDTCEKIMRPLSLIGSTLRFDKLDQAETRSLLMCFLHIMKTISEDALISYWLRAPFSEITDFFSILEVCLQNFRYLGKRNIVRKIAAAFKFVQATQNNGTLKGSNSSGQASGLLSQWMHSTSSHDGHKHHRSQTLPIIRGKNALSNPKLLQMIDNSTASNSTETDIVQYVDTEANIATEVSLTILDLLCLYTLNHQRQLQQSDCQNALMKKVFDTHMLFLQINQSAAALKHVFAALRLFVGKFPSAFFQGQADLCGSLCYEILKCCNHRSRSTQTEASALLYFFMRKNFEFNKQKSIVRSHLQLIKAVSQLIADAGIGGSRFQHSLAIINNFANGDKQMKNVNFPAEVKDLTKRIRTVLMATAQMKEHEKDPEMLVDLQYSLANSYASTPELRRTWLESMAKIHARNGDLSEAAMCYIHIAALIAEYLKRKGYWKMEKICTSRMLLEDGQVSDSNVLLTTHTGGSLFSMGWPAFLSITPNIKEEGAMKEDSGMQDTPYNENVLVEQLELCVEYLWKSERYELIAEVNKPIIAVFEKQRDFKRLSDLYYDIHRSYLKVAEVVNSEKRLFGRYYRVAFYGQGFFEEEEGKEYIYKEPKLTGLSEISQRLMKLYADKFGIDNVKIIQDSNKVNPKDLDPKYAYIQVTYVTPFFEEKEAEDRKTDFEMHHNINRFVFETPFTLSGKKHGGVEEQCKRRTVLT…
SIO_010081: DOCK10
subclass of: SO_0000673
so part of: DOCK10
location: join(1110587..1110688,1120165..1120284,1127905..1127994,1132446..1132528,1135602..1135674,1136000..1136131,1136385..1136519,1139984..1140167,1141719..1141804,1142235..1142318,1143417..1143572,1144836..1145057,1145758..1145880,1146451..1146533,1152268..1152390,1153683..1153762,1156949..1157136,1157756..1157821,1158670..1158762,1160617..1160740,1160892..1161013,1161692..1161778,1162319..1162411,1163493..1163611,1166176..1166245,1168995..1169108,1170386..1170457,1171067..1171213,1173560..1173643,1176367..1176463,1176977..1177021,1177475..1177650,1177779..1177895,1179403..1179514,1180199..1180320,1180406..1180520,1180688..1180754,1181511..1181558,1182217..1182318,1184494..1184622,1185273..1185381,1186067..1186204,1187728..1187910,1188482..1188592,1189943..1190158,1190843..1190900,1191225..1191323,1192972..1193078,1193562..1193684,1194544..1194657,1200019..1200165,1200702..1200912,1203132..1203322,1203923..1204023,1204347..1204485,1208112..1208231)
location: region:1110587-1208231:1
so has part: feature:1110587-1110688:1:exon
so has part: feature:1120165-1120284:1:exon
so has part: feature:1127905-1127994:1:exon
so has part: feature:1132446-1132528:1:exon
so has part: feature:1135602-1135674:1:exon
so has part: feature:1136000-1136131:1:exon
so has part: feature:1136385-1136519:1:exon
so has part: feature:1139984-1140167:1:exon
so has part: feature:1141719-1141804:1:exon
so has part: feature:1142235-1142318:1:exon
so has part: feature:1143417-1143572:1:exon
so has part: feature:1144836-1145057:1:exon
so has part: feature:1145758-1145880:1:exon
so has part: feature:1146451-1146533:1:exon
so has part: feature:1152268-1152390:1:exon
so has part: feature:1153683-1153762:1:exon
so has part: feature:1156949-1157136:1:exon
so has part: feature:1157756-1157821:1:exon
so has part: feature:1158670-1158762:1:exon
so has part: feature:1160617-1160740:1:exon
so has part: feature:1160892-1161013:1:exon
so has part: feature:1161692-1161778:1:exon
so has part: feature:1162319-1162411:1:exon
so has part: feature:1163493-1163611:1:exon
so has part: feature:1166176-1166245:1:exon
so has part: feature:1168995-1169108:1:exon
so has part: feature:1170386-1170457:1:exon
so has part: feature:1171067-1171213:1:exon
so has part: feature:1173560-1173643:1:exon
so has part: feature:1176367-1176463:1:exon
so has part: feature:1176977-1177021:1:exon
so has part: feature:1177475-1177650:1:exon
so has part: feature:1177779-1177895:1:exon
so has part: feature:1179403-1179514:1:exon
so has part: feature:1180199-1180320:1:exon
so has part: feature:1180406-1180520:1:exon
so has part: feature:1180688-1180754:1:exon
so has part: feature:1181511-1181558:1:exon
so has part: feature:1182217-1182318:1:exon
so has part: feature:1184494-1184622:1:exon
so has part: feature:1185273-1185381:1:exon
so has part: feature:1186067-1186204:1:exon
so has part: feature:1187728-1187910:1:exon
so has part: feature:1188482-1188592:1:exon
so has part: feature:1189943-1190158:1:exon
so has part: feature:1190843-1190900:1:exon
so has part: feature:1191225-1191323:1:exon
so has part: feature:1192972-1193078:1:exon
so has part: feature:1193562-1193684:1:exon
so has part: feature:1194544-1194657:1:exon
so has part: feature:1200019-1200165:1:exon
so has part: feature:1200702-1200912:1:exon
so has part: feature:1203132-1203322:1:exon
so has part: feature:1203923-1204023:1:exon
so has part: feature:1204347-1204485:1:exon
so has part: feature:1208112-1208231:1:exon

XP_030311793.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1110587-1110688:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1120165-1120284:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1127905-1127994:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132446-1132528:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1135602-1135674:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1136000-1136131:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1136385-1136519:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1139984-1140167:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1141719-1141804:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1142235-1142318:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1143417-1143572:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1144836-1145057:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1145758-1145880:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1146451-1146533:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1152268-1152390:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1153683-1153762:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1156949-1157136:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1157756-1157821:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1158670-1158762:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1160617-1160740:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1160892-1161013:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1161692-1161778:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1162319-1162411:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1163493-1163611:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1166176-1166245:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1168995-1169108:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1170386-1170457:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1171067-1171213:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1173560-1173643:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1176367-1176463:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1176977-1177021:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1177475-1177650:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1177779-1177895:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1179403-1179514:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1180199-1180320:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1180406-1180520:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1180688-1180754:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1181511-1181558:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1182217-1182318:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1184494-1184622:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1185273-1185381:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1186067-1186204:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1187728-1187910:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1188482-1188592:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1189943-1190158:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1190843-1190900:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1191225-1191323:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1192972-1193078:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1193562-1193684:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1194544-1194657:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1200019-1200165:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1200702-1200912:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1203132-1203322:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1203923-1204023:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1204347-1204485:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1208112-1208231:1:exon

LOC115598757
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115598757
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1221474..1224501
location: region:1221474-1224501:1
so has part: feature:1221474-1224501:1:exon
subclass of: SO_0000010

115598757
type: Gene
SIO_000068: ncbigene

position:1221474:1
position: 1221474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1224501:1
position: 1224501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1221474-1224501:1:exon

LOC115598757
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC115598757
product: putative coiled-coil domain-containing protein 195
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_030456296.1
SIO_010081: LOC115598757
subclass of: SO_0000673
so part of: LOC115598757
location: join(1221474..1221729,1222475..1222718,1224369..1224501)
location: region:1221474-1224501:1
so has part: feature:1221474-1221729:1:exon
so has part: feature:1222475-1222718:1:exon
so has part: feature:1224369-1224501:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1221474-1221729:1:exon

position:1221729:1
position: 1221729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1222475-1222718:1:exon

position:1222475:1
position: 1222475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1222718:1
position: 1222718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1224369-1224501:1:exon

position:1224369:1
position: 1224369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115598757
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC115598757
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative coiled-coil domain-containing protein 195
translation: MEGNAHLLQVIHKMRSQINRLERENRALRGELQVCGQRAERDAAREGGNSDMRSPDGDGEGPAGSAASLRGGTVAGPALAPKEQTDATMTVRRYSTTSPAPAAPSTSSHWDGTVVQGPPRTLPPAPPATAQPTLGEGRGLGETPTNLPSYSHSSKVRLLQDHVCKCRGKVKAVSFLLPMDVSSYAEKQGSLKSPQNQSTKQLTTITEKDM
SIO_010081: LOC115598757
subclass of: SO_0000673
so part of: LOC115598757
location: join(1221474..1221729,1222475..1222718,1224369..1224501)
location: region:1221474-1224501:1
so has part: feature:1221474-1221729:1:exon
so has part: feature:1222475-1222718:1:exon
so has part: feature:1224369-1224501:1:exon

XP_030312156.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1221474-1221729:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1222475-1222718:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1224369-1224501:1:exon

LOC103527314
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103527314
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1229330..1244578)
location: region:1229330-1244578:-1
so has part: feature:1229330-1244578:-1:exon
subclass of: SO_0000010

103527314
type: Gene
SIO_000068: ncbigene

position:1229330:-1
position: 1229330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1244578:-1
position: 1244578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1229330-1244578:-1:exon

LOC103527314
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103527314
product: guanylate cyclase soluble subunit beta-2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 23% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030456297.1
SIO_010081: LOC103527314
subclass of: SO_0000673
so part of: LOC103527314
location: complement(join(1229330..1229469,1230178..1230300,1230389..1230603,1232118..1232272,1232529..1232675,1234975..1235123,1235889..1236209,1238272..1238488,1239939..1240042,1240663..1240768,1240856..1241076,1242638..1242737,1242964..1243124,1243310..1243404,1244209..1244282,1244432..1244578))
location: region:1229330-1244578:-1
so has part: feature:1244432-1244578:-1:exon
so has part: feature:1244209-1244282:-1:exon
so has part: feature:1243310-1243404:-1:exon
so has part: feature:1242964-1243124:-1:exon
so has part: feature:1242638-1242737:-1:exon
so has part: feature:1240856-1241076:-1:exon
so has part: feature:1240663-1240768:-1:exon
so has part: feature:1239939-1240042:-1:exon
so has part: feature:1238272-1238488:-1:exon
so has part: feature:1235889-1236209:-1:exon
so has part: feature:1234975-1235123:-1:exon
so has part: feature:1232529-1232675:-1:exon
so has part: feature:1232118-1232272:-1:exon
so has part: feature:1230389-1230603:-1:exon
so has part: feature:1230178-1230300:-1:exon
so has part: feature:1229330-1229469:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1244432-1244578:-1:exon

position:1244432:-1
position: 1244432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1244209-1244282:-1:exon

position:1244209:-1
position: 1244209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1244282:-1
position: 1244282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1243310-1243404:-1:exon

position:1243310:-1
position: 1243310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1243404:-1
position: 1243404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1242964-1243124:-1:exon

position:1242964:-1
position: 1242964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1243124:-1
position: 1243124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1242638-1242737:-1:exon

position:1242638:-1
position: 1242638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1242737:-1
position: 1242737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1240856-1241076:-1:exon

position:1240856:-1
position: 1240856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1241076:-1
position: 1241076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1240663-1240768:-1:exon

position:1240663:-1
position: 1240663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1240768:-1
position: 1240768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1239939-1240042:-1:exon

position:1239939:-1
position: 1239939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1240042:-1
position: 1240042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1238272-1238488:-1:exon

position:1238272:-1
position: 1238272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1238488:-1
position: 1238488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1235889-1236209:-1:exon

position:1235889:-1
position: 1235889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1236209:-1
position: 1236209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1234975-1235123:-1:exon

position:1234975:-1
position: 1234975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1235123:-1
position: 1235123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1232529-1232675:-1:exon

position:1232529:-1
position: 1232529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1232675:-1
position: 1232675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1232118-1232272:-1:exon

position:1232118:-1
position: 1232118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1232272:-1
position: 1232272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1230389-1230603:-1:exon

position:1230389:-1
position: 1230389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1230603:-1
position: 1230603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1230178-1230300:-1:exon

position:1230178:-1
position: 1230178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1230300:-1
position: 1230300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1229330-1229469:-1:exon

position:1229469:-1
position: 1229469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103527314
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103527314
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanylate cyclase soluble subunit beta-2
translation: MAAVPAAPGTCSGLLCGRAEPWPARSGFFPVKQDPVSLPCSAGGLRNAEYGFINTCLKSLVIEKYGEETWEELRLQAGVQDSFLTFEVYKDDITMQLIDKACKILGVPADMVLREFGQYFFEFCKRSGYDHMLRTLGGNLYEFIENLDALHSYLSISYQEMNAPSFRVEKNEDGSMHLHYYSDRRGLCHIVPGIIGAAALDFFNIEISMEIVNQKEEEERTGKKEHIVFLVTQNPVFSYKERSKFSSSPRYHADPEKQIENQLNKEALEKAKNTMRDRGSSVCPVKKSHWKTVRGIITLGKGKLLRGFDPVYPKSLWIDTKTFCNGLPFHMVFDKELRVKQAGVSIQKIVPGLQTTGICLDQYFSIVHPEVPFTISSIQKFINSQFVFQTKREMMPESWKQRPMLELRGQMIWMEPLQCMLYLCSPLLRTLHELEERQMHIADIAPHDVTRDLILLNQQRLAEMELSNQLEKKKEELRVLSKHLEEEKKKTEALLYAMLPQHVANQLKEGRRVEAGEFKECTILFSDVVTFTNICAQCEPIQIVLMLNSMYLRFDRLTTVHDVYKVETIGDAYMVVGGVPVPVSTHAERVANFALGMIIAAKGVQNPVSGNPIQIRVGIHTGPVLAGVVGEKMPRYCLFGDTVNIASRMESHGVPSKIHLSSSAYHCLKYKNFEMTERGEIDVKGKGKMHTYFLIRNKTATENEIMGRPMKDLDSGHESAQSFQEGRTETIPSCHQTVTQTPPEKDQVLTIAMKYIDGPTDSQSSFKRRNQANTGDLAGKTYDSKSDGSLHGNQHPGPLNRGRVKPATEEPQRRNTRSNFCTLL
SIO_010081: LOC103527314
subclass of: SO_0000673
so part of: LOC103527314
location: complement(join(1229330..1229469,1230178..1230300,1230389..1230603,1232118..1232272,1232529..1232675,1234975..1235123,1235889..1236209,1238272..1238488,1239939..1240042,1240663..1240768,1240856..1241076,1242638..1242737,1242964..1243124,1243310..1243404,1244209..1244282,1244432..1244578))
location: region:1229330-1244578:-1
so has part: feature:1244432-1244578:-1:exon
so has part: feature:1244209-1244282:-1:exon
so has part: feature:1243310-1243404:-1:exon
so has part: feature:1242964-1243124:-1:exon
so has part: feature:1242638-1242737:-1:exon
so has part: feature:1240856-1241076:-1:exon
so has part: feature:1240663-1240768:-1:exon
so has part: feature:1239939-1240042:-1:exon
so has part: feature:1238272-1238488:-1:exon
so has part: feature:1235889-1236209:-1:exon
so has part: feature:1234975-1235123:-1:exon
so has part: feature:1232529-1232675:-1:exon
so has part: feature:1232118-1232272:-1:exon
so has part: feature:1230389-1230603:-1:exon
so has part: feature:1230178-1230300:-1:exon
so has part: feature:1229330-1229469:-1:exon

XP_030312157.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1244432-1244578:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1244209-1244282:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1243310-1243404:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1242964-1243124:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1242638-1242737:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1240856-1241076:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1240663-1240768:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1239939-1240042:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1238272-1238488:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1235889-1236209:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1234975-1235123:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1232529-1232675:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1232118-1232272:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1230389-1230603:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1230178-1230300:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1229330-1229469:-1:exon

LOC115598752
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115598752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1261640..1264832)
location: region:1261640-1264832:-1
so has part: feature:1261640-1264832:-1:exon
subclass of: SO_0000011

115598752
type: Gene
SIO_000068: ncbigene

position:1261640:-1
position: 1261640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1264832:-1
position: 1264832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1261640-1264832:-1:exon

LOC115598752
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115598752
product: uncharacterized LOC115598752, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003987900.1
SIO_010081: LOC115598752
subclass of: SO_0000673
so part of: LOC115598752
location: complement(join(1261640..1261775,1263573..1263738,1264764..1264832))
location: region:1261640-1264832:-1
so has part: feature:1264764-1264832:-1:exon
so has part: feature:1263573-1263738:-1:exon
so has part: feature:1261640-1261775:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1264764-1264832:-1:exon

position:1264764:-1
position: 1264764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1263573-1263738:-1:exon

position:1263573:-1
position: 1263573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1263738:-1
position: 1263738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1261640-1261775:-1:exon

position:1261775:-1
position: 1261775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115598752
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115598752
product: uncharacterized LOC115598752, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003987899.1
SIO_010081: LOC115598752
subclass of: SO_0000673
so part of: LOC115598752
location: complement(join(1262412..1262708,1263573..1263738,1264764..1264832))
location: region:1262412-1264832:-1
so has part: feature:1264764-1264832:-1:exon
so has part: feature:1263573-1263738:-1:exon
so has part: feature:1262412-1262708:-1:exon

position:1262412:-1
position: 1262412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1264764-1264832:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1263573-1263738:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1262412-1262708:-1:exon

position:1262708:-1
position: 1262708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CUL3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: CUL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1265159..1316614
location: region:1265159-1316614:1
so has part: feature:1265159-1316614:1:exon
subclass of: SO_0000010

103527315
type: Gene
SIO_000068: ncbigene

position:1265159:1
position: 1265159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1316614:1
position: 1316614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1265159-1316614:1:exon

CUL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CUL3
product: cullin 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 92 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030455974.1
SIO_010081: CUL3
subclass of: SO_0000673
so part of: CUL3
location: join(1265159..1265631,1282750..1282947,1288403..1288516,1295859..1296019,1297321..1297435,1298715..1298943,1300796..1300941,1303767..1303943,1304362..1304532,1305960..1306067,1307174..1307298,1307670..1307766,1308803..1308937,1313299..1313485,1314956..1315101,1315791..1316614)
location: region:1265159-1316614:1
so has part: feature:1265159-1265631:1:exon
so has part: feature:1282750-1282947:1:exon
so has part: feature:1288403-1288516:1:exon
so has part: feature:1295859-1296019:1:exon
so has part: feature:1297321-1297435:1:exon
so has part: feature:1298715-1298943:1:exon
so has part: feature:1300796-1300941:1:exon
so has part: feature:1303767-1303943:1:exon
so has part: feature:1304362-1304532:1:exon
so has part: feature:1305960-1306067:1:exon
so has part: feature:1307174-1307298:1:exon
so has part: feature:1307670-1307766:1:exon
so has part: feature:1308803-1308937:1:exon
so has part: feature:1313299-1313485:1:exon
so has part: feature:1314956-1315101:1:exon
so has part: feature:1315791-1316614:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1265159-1265631:1:exon

position:1265631:1
position: 1265631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1282750-1282947:1:exon

position:1282750:1
position: 1282750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1282947:1
position: 1282947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1288403-1288516:1:exon

position:1288403:1
position: 1288403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1288516:1
position: 1288516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1295859-1296019:1:exon

position:1295859:1
position: 1295859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1296019:1
position: 1296019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1297321-1297435:1:exon

position:1297321:1
position: 1297321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1297435:1
position: 1297435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1298715-1298943:1:exon

position:1298715:1
position: 1298715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1298943:1
position: 1298943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1300796-1300941:1:exon

position:1300796:1
position: 1300796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1300941:1
position: 1300941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1303767-1303943:1:exon

position:1303767:1
position: 1303767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1303943:1
position: 1303943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1304362-1304532:1:exon

position:1304362:1
position: 1304362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1304532:1
position: 1304532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1305960-1306067:1:exon

position:1305960:1
position: 1305960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1306067:1
position: 1306067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1307174-1307298:1:exon

position:1307174:1
position: 1307174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1307298:1
position: 1307298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1307670-1307766:1:exon

position:1307670:1
position: 1307670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1307766:1
position: 1307766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1308803-1308937:1:exon

position:1308803:1
position: 1308803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1308937:1
position: 1308937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1313299-1313485:1:exon

position:1313299:1
position: 1313299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1313485:1
position: 1313485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1314956-1315101:1:exon

position:1314956:1
position: 1314956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1315101:1
position: 1315101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1315791-1316614:1:exon

position:1315791:1
position: 1315791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CUL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CUL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cullin-3
translation: MSNLSKGTGSRKDTKMRIRAFPMTMDEKYVNSIWDLLKNAIQEIQRKNNSGLSFEELYRNAYTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA
SIO_010081: CUL3
subclass of: SO_0000673
so part of: CUL3
location: join(1265566..1265631,1282750..1282947,1288403..1288516,1295859..1296019,1297321..1297435,1298715..1298943,1300796..1300941,1303767..1303943,1304362..1304532,1305960..1306067,1307174..1307298,1307670..1307766,1308803..1308937,1313299..1313485,1314956..1315101,1315791..1315922)
location: region:1265566-1315922:1
so has part: feature:1265566-1265631:1:exon
so has part: feature:1282750-1282947:1:exon
so has part: feature:1288403-1288516:1:exon
so has part: feature:1295859-1296019:1:exon
so has part: feature:1297321-1297435:1:exon
so has part: feature:1298715-1298943:1:exon
so has part: feature:1300796-1300941:1:exon
so has part: feature:1303767-1303943:1:exon
so has part: feature:1304362-1304532:1:exon
so has part: feature:1305960-1306067:1:exon
so has part: feature:1307174-1307298:1:exon
so has part: feature:1307670-1307766:1:exon
so has part: feature:1308803-1308937:1:exon
so has part: feature:1313299-1313485:1:exon
so has part: feature:1314956-1315101:1:exon
so has part: feature:1315791-1315922:1:exon

XP_030311834.1
type: Protein
SIO_000068: ncbiprotein

position:1265566:1
position: 1265566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1315922:1
position: 1315922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1265566-1265631:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1282750-1282947:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288403-1288516:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1295859-1296019:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1297321-1297435:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1298715-1298943:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1300796-1300941:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1303767-1303943:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1304362-1304532:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305960-1306067:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1307174-1307298:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1307670-1307766:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1308803-1308937:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1313299-1313485:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1314956-1315101:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1315791-1315922:1:exon

FAM124B
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: FAM124B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1323505..1332109
location: region:1323505-1332109:1
so has part: feature:1323505-1332109:1:exon
subclass of: SO_0000010

103527330
type: Gene
SIO_000068: ncbigene

position:1323505:1
position: 1323505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1332109:1
position: 1332109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1323505-1332109:1:exon

FAM124B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FAM124B
product: family with sequence similarity 124 member B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_008492503.2
SIO_010081: FAM124B
subclass of: SO_0000673
so part of: FAM124B
location: join(1323505..1323555,1327328..1327548,1327935..1328673,1330851..1332109)
location: region:1323505-1332109:1
so has part: feature:1323505-1323555:1:exon
so has part: feature:1327328-1327548:1:exon
so has part: feature:1327935-1328673:1:exon
so has part: feature:1330851-1332109:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1323505-1323555:1:exon

position:1323555:1
position: 1323555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1327328-1327548:1:exon

position:1327328:1
position: 1327328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1327548:1
position: 1327548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1327935-1328673:1:exon

position:1327935:1
position: 1327935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1328673:1
position: 1328673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1330851-1332109:1:exon

position:1330851:1
position: 1330851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FAM124B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FAM124B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM124B
translation: MSISSADRTLCNGDGADSLMTVHLLTSAGHSELLQKTLDRLLEWLCLDIRLFQVSQRVTPLKYYERYPKRSSGFPGISVLLFLHDDLGEERIFQIQEEFQHPPWRYQCAQIAGGQSHPDAPAHQDFYCLDEQMPVWGIRRVHCGPEVLRVTVYCSFDNYEDAVRLYEMILQKEATTQKNTFCVFVLYSTPSIAVQLCLKQLPIEVAAEPKDSSALQFRVQEMGQLVPLLPNPCIPISSTRWQTQDYEGNIILLQVQGSSKPREANLGLSQQHRSANSEKPPQDLVPVKGSNPGWRSQEVRAAKAKPKGDQSKALPPQQAGGGLPRHCCSPLSGPAARCWGDAPSLHRQAGTQLQTSLQESRVHREPPETNVDTGLAVRKPGSGRCRLHSFSRDLRSSLLRPPAPRAGAGRALDRTQLPLAAAKRSQGAGQRAAGLLPPTLRDSPANRAGEEEEEEEEFFI
SIO_010081: FAM124B
subclass of: SO_0000673
so part of: FAM124B
location: join(1327526..1327548,1327935..1328673,1330851..1331471)
location: region:1327526-1331471:1
so has part: feature:1327526-1327548:1:exon
so has part: feature:1327935-1328673:1:exon
so has part: feature:1330851-1331471:1:exon

XP_008490725.2
type: Protein
SIO_000068: ncbiprotein

position:1327526:1
position: 1327526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1331471:1
position: 1331471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1327526-1327548:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1327935-1328673:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1330851-1331471:1:exon

SERPINE2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SERPINE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1398133..1423393
location: region:1398133-1423393:1
so has part: feature:1398133-1423393:1:exon
subclass of: SO_0000010

103527316
type: Gene
SIO_000068: ncbigene

position:1398133:1
position: 1398133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1423393:1
position: 1423393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1398133-1423393:1:exon

SERPINE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SERPINE2
product: serpin family E member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030456458.1
SIO_010081: SERPINE2
subclass of: SO_0000673
so part of: SERPINE2
location: join(1398133..1398200,1412521..1412794,1413963..1414082,1415258..1415485,1416578..1416775,1419237..1419435,1419572..1419672,1420717..1420803,1421830..1421913,1422722..1423393)
location: region:1398133-1423393:1
so has part: feature:1398133-1398200:1:exon
so has part: feature:1412521-1412794:1:exon
so has part: feature:1413963-1414082:1:exon
so has part: feature:1415258-1415485:1:exon
so has part: feature:1416578-1416775:1:exon
so has part: feature:1419237-1419435:1:exon
so has part: feature:1419572-1419672:1:exon
so has part: feature:1420717-1420803:1:exon
so has part: feature:1421830-1421913:1:exon
so has part: feature:1422722-1423393:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1398133-1398200:1:exon

position:1398200:1
position: 1398200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1412521-1412794:1:exon

position:1412521:1
position: 1412521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1412794:1
position: 1412794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1413963-1414082:1:exon

position:1413963:1
position: 1413963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1414082:1
position: 1414082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1415258-1415485:1:exon

position:1415258:1
position: 1415258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1415485:1
position: 1415485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1416578-1416775:1:exon

position:1416578:1
position: 1416578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1416775:1
position: 1416775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1419237-1419435:1:exon

position:1419237:1
position: 1419237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1419435:1
position: 1419435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1419572-1419672:1:exon

position:1419572:1
position: 1419572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1419672:1
position: 1419672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1420717-1420803:1:exon

position:1420717:1
position: 1420717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1420803:1
position: 1420803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1421830-1421913:1:exon

position:1421830:1
position: 1421830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1421913:1
position: 1421913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1422722-1423393:1:exon

position:1422722:1
position: 1422722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SERPINE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SERPINE2
product: serpin family E member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030456459.1
SIO_010081: SERPINE2
subclass of: SO_0000673
so part of: SERPINE2
location: join(1398133..1398200,1412521..1412794,1413966..1414082,1415258..1415485,1416578..1416775,1419237..1419435,1419572..1419672,1420717..1420803,1421830..1421913,1422722..1423393)
location: region:1398133-1423393:1
so has part: feature:1398133-1398200:1:exon
so has part: feature:1412521-1412794:1:exon
so has part: feature:1413966-1414082:1:exon
so has part: feature:1415258-1415485:1:exon
so has part: feature:1416578-1416775:1:exon
so has part: feature:1419237-1419435:1:exon
so has part: feature:1419572-1419672:1:exon
so has part: feature:1420717-1420803:1:exon
so has part: feature:1421830-1421913:1:exon
so has part: feature:1422722-1423393:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1398133-1398200:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1412521-1412794:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1413966-1414082:1:exon

position:1413966:1
position: 1413966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1415258-1415485:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1416578-1416775:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1419237-1419435:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1419572-1419672:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1420717-1420803:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1421830-1421913:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1422722-1423393:1:exon

SERPINE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SERPINE2
product: serpin family E member 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 29 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030456460.1
SIO_010081: SERPINE2
subclass of: SO_0000673
so part of: SERPINE2
location: join(1398133..1398200,1412521..1412794,1415258..1415485,1416578..1416775,1419237..1419435,1419572..1419672,1420717..1420803,1421830..1421913,1422722..1423388)
location: region:1398133-1423388:1
so has part: feature:1398133-1398200:1:exon
so has part: feature:1412521-1412794:1:exon
so has part: feature:1415258-1415485:1:exon
so has part: feature:1416578-1416775:1:exon
so has part: feature:1419237-1419435:1:exon
so has part: feature:1419572-1419672:1:exon
so has part: feature:1420717-1420803:1:exon
so has part: feature:1421830-1421913:1:exon
so has part: feature:1422722-1423388:1:exon

position:1423388:1
position: 1423388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1398133-1398200:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1412521-1412794:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1415258-1415485:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1416578-1416775:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1419237-1419435:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1419572-1419672:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1420717-1420803:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1421830-1421913:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1422722-1423388:1:exon

SERPINE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SERPINE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glia-derived nexin isoform X1
translation: MNWHFSLLLVLGTLTSVCSQFSFYPLEELSSDVGIQVFNQIVKAKPQDNVVVSPHGIASVLGVLQLGADGKTKKQLTTMMRYSVNAAGSKEESQHHETSQLSPDHKQVLRGPPVVHRIQFENLCYGVGKALKKINRLIVSKKNKDIVTIANAVFAKNGFKMEVPFVTRNKEVFQCSVKSVDFEDPNAASDSINLWVKNETRGMIDQVVTPEDIDVGLTRLVLVNAVYFKGLWKSRFRPENTKKRPFHGADGKTYQVPMLSQLSIFRCGTTSTPNELWYNIIELPYHGEMISMLIALPTESTTPLSAIIPHISTKTIGSWMTTMVAKRVQVILPKFTAEAETDLKDPLKALGITDMFDQSKANFAKITRTEGLHVSRVLQKTKIEVSEDGTKASAATTAILIARSSPPWFIVDRPFVFFIRHNPTGTILFMGQINKP
SIO_010081: SERPINE2
subclass of: SO_0000673
so part of: SERPINE2
location: join(1412539..1412794,1413963..1414082,1415258..1415485,1416578..1416775,1419237..1419435,1419572..1419672,1420717..1420803,1421830..1421913,1422722..1422759)
location: region:1412539-1422759:1
so has part: feature:1412539-1412794:1:exon
so has part: feature:1413963-1414082:1:exon
so has part: feature:1415258-1415485:1:exon
so has part: feature:1416578-1416775:1:exon
so has part: feature:1419237-1419435:1:exon
so has part: feature:1419572-1419672:1:exon
so has part: feature:1420717-1420803:1:exon
so has part: feature:1421830-1421913:1:exon
so has part: feature:1422722-1422759:1:exon

XP_030312318.1
type: Protein
SIO_000068: ncbiprotein

position:1412539:1
position: 1412539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1422759:1
position: 1422759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1412539-1412794:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1413963-1414082:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1415258-1415485:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1416578-1416775:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1419237-1419435:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1419572-1419672:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1420717-1420803:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1421830-1421913:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1422722-1422759:1:exon

SERPINE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SERPINE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glia-derived nexin isoform X2
translation: MNWHFSLLLVLGTLTSVCSQFSFYPLEELSSDVGIQVFNQIVKAKPQDNVVVSPHGIASVLGVLQLGADGKTKKQLTTMMRYSVNAGSKEESQHHETSQLSPDHKQVLRGPPVVHRIQFENLCYGVGKALKKINRLIVSKKNKDIVTIANAVFAKNGFKMEVPFVTRNKEVFQCSVKSVDFEDPNAASDSINLWVKNETRGMIDQVVTPEDIDVGLTRLVLVNAVYFKGLWKSRFRPENTKKRPFHGADGKTYQVPMLSQLSIFRCGTTSTPNELWYNIIELPYHGEMISMLIALPTESTTPLSAIIPHISTKTIGSWMTTMVAKRVQVILPKFTAEAETDLKDPLKALGITDMFDQSKANFAKITRTEGLHVSRVLQKTKIEVSEDGTKASAATTAILIARSSPPWFIVDRPFVFFIRHNPTGTILFMGQINKP
SIO_010081: SERPINE2
subclass of: SO_0000673
so part of: SERPINE2
location: join(1412539..1412794,1413966..1414082,1415258..1415485,1416578..1416775,1419237..1419435,1419572..1419672,1420717..1420803,1421830..1421913,1422722..1422759)
location: region:1412539-1422759:1
so has part: feature:1412539-1412794:1:exon
so has part: feature:1413966-1414082:1:exon
so has part: feature:1415258-1415485:1:exon
so has part: feature:1416578-1416775:1:exon
so has part: feature:1419237-1419435:1:exon
so has part: feature:1419572-1419672:1:exon
so has part: feature:1420717-1420803:1:exon
so has part: feature:1421830-1421913:1:exon
so has part: feature:1422722-1422759:1:exon

XP_030312319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1412539-1412794:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1413966-1414082:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1415258-1415485:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1416578-1416775:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1419237-1419435:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1419572-1419672:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1420717-1420803:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1421830-1421913:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1422722-1422759:1:exon

SERPINE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SERPINE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glia-derived nexin isoform X3
translation: MNWHFSLLLVLGTLTSVCSQFSFYPLEELSSDVGIQVFNQIVKAKPQDNVVVSPHGIASVLGVLQLGADGKTKKQLTTMMRYSVNGVGKALKKINRLIVSKKNKDIVTIANAVFAKNGFKMEVPFVTRNKEVFQCSVKSVDFEDPNAASDSINLWVKNETRGMIDQVVTPEDIDVGLTRLVLVNAVYFKGLWKSRFRPENTKKRPFHGADGKTYQVPMLSQLSIFRCGTTSTPNELWYNIIELPYHGEMISMLIALPTESTTPLSAIIPHISTKTIGSWMTTMVAKRVQVILPKFTAEAETDLKDPLKALGITDMFDQSKANFAKITRTEGLHVSRVLQKTKIEVSEDGTKASAATTAILIARSSPPWFIVDRPFVFFIRHNPTGTILFMGQINKP
SIO_010081: SERPINE2
subclass of: SO_0000673
so part of: SERPINE2
location: join(1412539..1412794,1415258..1415485,1416578..1416775,1419237..1419435,1419572..1419672,1420717..1420803,1421830..1421913,1422722..1422759)
location: region:1412539-1422759:1
so has part: feature:1412539-1412794:1:exon
so has part: feature:1415258-1415485:1:exon
so has part: feature:1416578-1416775:1:exon
so has part: feature:1419237-1419435:1:exon
so has part: feature:1419572-1419672:1:exon
so has part: feature:1420717-1420803:1:exon
so has part: feature:1421830-1421913:1:exon
so has part: feature:1422722-1422759:1:exon

XP_030312320.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1412539-1412794:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1415258-1415485:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1416578-1416775:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1419237-1419435:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1419572-1419672:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1420717-1420803:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1421830-1421913:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1422722-1422759:1:exon

WDFY1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: WDFY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1431548..1455182
location: region:1431548-1455182:1
so has part: feature:1431548-1455182:1:exon
subclass of: SO_0000010

103527331
type: Gene
SIO_000068: ncbigene

position:1431548:1
position: 1431548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1455182:1
position: 1455182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1431548-1455182:1:exon

WDFY1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: WDFY1
product: WD repeat and FYVE domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 22 ESTs, 1 long SRA read, 11 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_008492504.2
SIO_010081: WDFY1
subclass of: SO_0000673
so part of: WDFY1
location: join(1431548..1431794,1439857..1439924,1440593..1440666,1441875..1441929,1443243..1443393,1445791..1445903,1447306..1447432,1449554..1449659,1451257..1451358,1452898..1453028,1454042..1454150,1454811..1455182)
location: region:1431548-1455182:1
so has part: feature:1431548-1431794:1:exon
so has part: feature:1439857-1439924:1:exon
so has part: feature:1440593-1440666:1:exon
so has part: feature:1441875-1441929:1:exon
so has part: feature:1443243-1443393:1:exon
so has part: feature:1445791-1445903:1:exon
so has part: feature:1447306-1447432:1:exon
so has part: feature:1449554-1449659:1:exon
so has part: feature:1451257-1451358:1:exon
so has part: feature:1452898-1453028:1:exon
so has part: feature:1454042-1454150:1:exon
so has part: feature:1454811-1455182:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1431548-1431794:1:exon

position:1431794:1
position: 1431794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1439857-1439924:1:exon

position:1439857:1
position: 1439857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1439924:1
position: 1439924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1440593-1440666:1:exon

position:1440593:1
position: 1440593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1440666:1
position: 1440666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1441875-1441929:1:exon

position:1441875:1
position: 1441875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1441929:1
position: 1441929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1443243-1443393:1:exon

position:1443243:1
position: 1443243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1443393:1
position: 1443393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1445791-1445903:1:exon

position:1445791:1
position: 1445791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1445903:1
position: 1445903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1447306-1447432:1:exon

position:1447306:1
position: 1447306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1447432:1
position: 1447432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1449554-1449659:1:exon

position:1449554:1
position: 1449554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1449659:1
position: 1449659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1451257-1451358:1:exon

position:1451257:1
position: 1451257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1451358:1
position: 1451358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1452898-1453028:1:exon

position:1452898:1
position: 1452898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1453028:1
position: 1453028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1454042-1454150:1:exon

position:1454042:1
position: 1454042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1454150:1
position: 1454150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1454811-1455182:1:exon

position:1454811:1
position: 1454811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WDFY1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: WDFY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat and FYVE domain-containing protein 1 isoform X1
translation: MAAEIHSRPQSSRPVLLSKVEGHQDAVSAALLIPKEDGVITASEDRTIRVWLKRDSGQYWPSIYHTMSSPCSAMAYHHDSRRIFVGQDNGAIMEFHISEDFNKMNFVKTYPAHQNRVSAITFCLTSEWVISTGHDKCISWMCTRSGSMLGRHYFTSWASCLQYDHETRYAFVGDYSGQITLLKLEQNTCSVITTLKGHEGSINSLWWDPVQRLLFSGASDNSIIMWDIGGRKGRTLLLQGHHDKVQAICYIQLTRQLVSCSADGGIAVWNMDISREEAPQWLESDSCQKCEQPFFWNIKQMWDTKTLGLRQHHCRKCGQAVCGKCSTKRSSYPIMGFEFQVRVCDSCFESIKDEDRTSLATFHEGKHNISHMSMDISRGLMVTCGSDRIVKIWDMTPVVGCSLATGFSSR
SIO_010081: WDFY1
subclass of: SO_0000673
so part of: WDFY1
location: join(1431658..1431794,1439857..1439924,1440593..1440666,1441875..1441929,1443243..1443393,1445791..1445903,1447306..1447432,1449554..1449659,1451257..1451358,1452898..1453028,1454042..1454150,1454811..1454870)
location: region:1431658-1454870:1
so has part: feature:1431658-1431794:1:exon
so has part: feature:1439857-1439924:1:exon
so has part: feature:1440593-1440666:1:exon
so has part: feature:1441875-1441929:1:exon
so has part: feature:1443243-1443393:1:exon
so has part: feature:1445791-1445903:1:exon
so has part: feature:1447306-1447432:1:exon
so has part: feature:1449554-1449659:1:exon
so has part: feature:1451257-1451358:1:exon
so has part: feature:1452898-1453028:1:exon
so has part: feature:1454042-1454150:1:exon
so has part: feature:1454811-1454870:1:exon

XP_008490726.2
type: Protein
SIO_000068: ncbiprotein

position:1431658:1
position: 1431658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1454870:1
position: 1454870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1431658-1431794:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1439857-1439924:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1440593-1440666:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1441875-1441929:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1443243-1443393:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1445791-1445903:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1447306-1447432:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1449554-1449659:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1451257-1451358:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1452898-1453028:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1454042-1454150:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1454811-1454870:1:exon

WDFY1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: WDFY1
product: WD repeat and FYVE domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030455908.1
SIO_010081: WDFY1
subclass of: SO_0000673
so part of: WDFY1
location: join(1431810..1431889,1439857..1439924,1440593..1440666,1441875..1441929,1443243..1443393,1445791..1445903,1447306..1447432,1449554..1449659,1451257..1451358,1452898..1453028,1454042..1454150,1454811..1455182)
location: region:1431810-1455182:1
so has part: feature:1431810-1431889:1:exon
so has part: feature:1439857-1439924:1:exon
so has part: feature:1440593-1440666:1:exon
so has part: feature:1441875-1441929:1:exon
so has part: feature:1443243-1443393:1:exon
so has part: feature:1445791-1445903:1:exon
so has part: feature:1447306-1447432:1:exon
so has part: feature:1449554-1449659:1:exon
so has part: feature:1451257-1451358:1:exon
so has part: feature:1452898-1453028:1:exon
so has part: feature:1454042-1454150:1:exon
so has part: feature:1454811-1455182:1:exon

position:1431810:1
position: 1431810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1431810-1431889:1:exon

position:1431889:1
position: 1431889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1439857-1439924:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1440593-1440666:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1441875-1441929:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1443243-1443393:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1445791-1445903:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1447306-1447432:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1449554-1449659:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1451257-1451358:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1452898-1453028:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1454042-1454150:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1454811-1455182:1:exon

WDFY1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: WDFY1
product: WD repeat and FYVE domain containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030455909.1
SIO_010081: WDFY1
subclass of: SO_0000673
so part of: WDFY1
location: join(1431853..1431889,1436135..1436264,1439857..1439924,1440593..1440666,1441875..1441929,1443243..1443393,1445791..1445903,1447306..1447432,1449554..1449659,1451257..1451358,1452898..1453028,1454042..1454150,1454811..1455182)
location: region:1431853-1455182:1
so has part: feature:1431853-1431889:1:exon
so has part: feature:1436135-1436264:1:exon
so has part: feature:1439857-1439924:1:exon
so has part: feature:1440593-1440666:1:exon
so has part: feature:1441875-1441929:1:exon
so has part: feature:1443243-1443393:1:exon
so has part: feature:1445791-1445903:1:exon
so has part: feature:1447306-1447432:1:exon
so has part: feature:1449554-1449659:1:exon
so has part: feature:1451257-1451358:1:exon
so has part: feature:1452898-1453028:1:exon
so has part: feature:1454042-1454150:1:exon
so has part: feature:1454811-1455182:1:exon

position:1431853:1
position: 1431853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1431853-1431889:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1436135-1436264:1:exon

position:1436135:1
position: 1436135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1436264:1
position: 1436264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1439857-1439924:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1440593-1440666:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1441875-1441929:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1443243-1443393:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1445791-1445903:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1447306-1447432:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1449554-1449659:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1451257-1451358:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1452898-1453028:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1454042-1454150:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1454811-1455182:1:exon

WDFY1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: WDFY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat and FYVE domain-containing protein 1 isoform X2
translation: MSSPCSAMAYHHDSRRIFVGQDNGAIMEFHISEDFNKMNFVKTYPAHQNRVSAITFCLTSEWVISTGHDKCISWMCTRSGSMLGRHYFTSWASCLQYDHETRYAFVGDYSGQITLLKLEQNTCSVITTLKGHEGSINSLWWDPVQRLLFSGASDNSIIMWDIGGRKGRTLLLQGHHDKVQAICYIQLTRQLVSCSADGGIAVWNMDISREEAPQWLESDSCQKCEQPFFWNIKQMWDTKTLGLRQHHCRKCGQAVCGKCSTKRSSYPIMGFEFQVRVCDSCFESIKDEDRTSLATFHEGKHNISHMSMDISRGLMVTCGSDRIVKIWDMTPVVGCSLATGFSSR
SIO_010081: WDFY1
subclass of: SO_0000673
so part of: WDFY1
location: join(1439918..1439924,1440593..1440666,1441875..1441929,1443243..1443393,1445791..1445903,1447306..1447432,1449554..1449659,1451257..1451358,1452898..1453028,1454042..1454150,1454811..1454870)
location: region:1439918-1454870:1
so has part: feature:1439918-1439924:1:exon
so has part: feature:1440593-1440666:1:exon
so has part: feature:1441875-1441929:1:exon
so has part: feature:1443243-1443393:1:exon
so has part: feature:1445791-1445903:1:exon
so has part: feature:1447306-1447432:1:exon
so has part: feature:1449554-1449659:1:exon
so has part: feature:1451257-1451358:1:exon
so has part: feature:1452898-1453028:1:exon
so has part: feature:1454042-1454150:1:exon
so has part: feature:1454811-1454870:1:exon

XP_030311768.1
type: Protein
SIO_000068: ncbiprotein

position:1439918:1
position: 1439918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1439918-1439924:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1440593-1440666:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1441875-1441929:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1443243-1443393:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1445791-1445903:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1447306-1447432:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1449554-1449659:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1451257-1451358:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1452898-1453028:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1454042-1454150:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1454811-1454870:1:exon

WDFY1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: WDFY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat and FYVE domain-containing protein 1 isoform X2
translation: MSSPCSAMAYHHDSRRIFVGQDNGAIMEFHISEDFNKMNFVKTYPAHQNRVSAITFCLTSEWVISTGHDKCISWMCTRSGSMLGRHYFTSWASCLQYDHETRYAFVGDYSGQITLLKLEQNTCSVITTLKGHEGSINSLWWDPVQRLLFSGASDNSIIMWDIGGRKGRTLLLQGHHDKVQAICYIQLTRQLVSCSADGGIAVWNMDISREEAPQWLESDSCQKCEQPFFWNIKQMWDTKTLGLRQHHCRKCGQAVCGKCSTKRSSYPIMGFEFQVRVCDSCFESIKDEDRTSLATFHEGKHNISHMSMDISRGLMVTCGSDRIVKIWDMTPVVGCSLATGFSSR
SIO_010081: WDFY1
subclass of: SO_0000673
so part of: WDFY1
location: join(1439918..1439924,1440593..1440666,1441875..1441929,1443243..1443393,1445791..1445903,1447306..1447432,1449554..1449659,1451257..1451358,1452898..1453028,1454042..1454150,1454811..1454870)
location: region:1439918-1454870:1
so has part: feature:1439918-1439924:1:exon
so has part: feature:1440593-1440666:1:exon
so has part: feature:1441875-1441929:1:exon
so has part: feature:1443243-1443393:1:exon
so has part: feature:1445791-1445903:1:exon
so has part: feature:1447306-1447432:1:exon
so has part: feature:1449554-1449659:1:exon
so has part: feature:1451257-1451358:1:exon
so has part: feature:1452898-1453028:1:exon
so has part: feature:1454042-1454150:1:exon
so has part: feature:1454811-1454870:1:exon

XP_030311769.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1439918-1439924:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1440593-1440666:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1441875-1441929:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1443243-1443393:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1445791-1445903:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1447306-1447432:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1449554-1449659:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1451257-1451358:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1452898-1453028:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1454042-1454150:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1454811-1454870:1:exon

SCG2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SCG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1465388..1487877)
location: region:1465388-1487877:-1
so has part: feature:1465388-1487877:-1:exon
subclass of: SO_0000010

103527086
type: Gene
SIO_000068: ncbigene

position:1465388:-1
position: 1465388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1487877:-1
position: 1487877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1465388-1487877:-1:exon

SCG2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9244
gene: SCG2
product: secretogranin II, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003987878.1
SIO_010081: SCG2
so part of: SCG2
location: complement(join(1465388..1465454,1479856..1479972,1485066..1485301,1487736..1487877))
location: region:1465388-1487877:-1
so has part: feature:1487736-1487877:-1:exon
so has part: feature:1485066-1485301:-1:exon
so has part: feature:1479856-1479972:-1:exon
so has part: feature:1465388-1465454:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1487736-1487877:-1:exon

position:1487736:-1
position: 1487736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1485066-1485301:-1:exon

position:1485066:-1
position: 1485066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1485301:-1
position: 1485301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1479856-1479972:-1:exon

position:1479856:-1
position: 1479856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1479972:-1
position: 1479972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1465388-1465454:-1:exon

position:1465454:-1
position: 1465454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SCG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SCG2
product: secretogranin II, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030455910.1
SIO_010081: SCG2
subclass of: SO_0000673
so part of: SCG2
location: complement(join(1466888..1469268,1479856..1479972,1485066..1485301,1487736..1487877))
location: region:1466888-1487877:-1
so has part: feature:1487736-1487877:-1:exon
so has part: feature:1485066-1485301:-1:exon
so has part: feature:1479856-1479972:-1:exon
so has part: feature:1466888-1469268:-1:exon

position:1466888:-1
position: 1466888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1487736-1487877:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1485066-1485301:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1479856-1479972:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1466888-1469268:-1:exon

position:1469268:-1
position: 1469268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SCG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SCG2
product: secretogranin II, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030455913.1
SIO_010081: SCG2
subclass of: SO_0000673
so part of: SCG2
location: complement(join(1466888..1469268,1479856..1479972,1481441..1481650))
location: region:1466888-1481650:-1
so has part: feature:1481441-1481650:-1:exon
so has part: feature:1479856-1479972:-1:exon
so has part: feature:1466888-1469268:-1:exon

position:1481650:-1
position: 1481650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1481441-1481650:-1:exon

position:1481441:-1
position: 1481441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1479856-1479972:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1466888-1469268:-1:exon

SCG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SCG2
product: secretogranin II, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030455911.1
SIO_010081: SCG2
subclass of: SO_0000673
so part of: SCG2
location: complement(join(1466888..1469268,1479856..1479972,1480330..1480427,1481441..1481518))
location: region:1466888-1481518:-1
so has part: feature:1481441-1481518:-1:exon
so has part: feature:1480330-1480427:-1:exon
so has part: feature:1479856-1479972:-1:exon
so has part: feature:1466888-1469268:-1:exon

position:1481518:-1
position: 1481518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1481441-1481518:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1480330-1480427:-1:exon

position:1480330:-1
position: 1480330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1480427:-1
position: 1480427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1479856-1479972:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1466888-1469268:-1:exon

SCG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SCG2
product: secretogranin II, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 2 long SRA reads, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030455912.1
SIO_010081: SCG2
subclass of: SO_0000673
so part of: SCG2
location: complement(join(1466888..1469268,1472621..1472747))
location: region:1466888-1472747:-1
so has part: feature:1472621-1472747:-1:exon
so has part: feature:1466888-1469268:-1:exon

position:1472747:-1
position: 1472747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1472621-1472747:-1:exon

position:1472621:-1
position: 1472621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1466888-1469268:-1:exon

SCG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SCG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: secretogranin-2
translation: MAKPKTSQLESACALTFLLVVICGVDAASFQQHQLLQKDPDYVMKNLQRFPNPDMIKALEYIEDLRKQANKGESSPDYSSYQSGPYLLQQKESKDQVHLADNVRDSLTEDESQWVKVMLEALRQAEKESKVGPKESKPYGLSPDSNFPAGITDDYEAYKWPERWQKYLKMPLGHYEESSRDSPFKRTNEIVEEQYTPQSLATLESVFQELGKMAGPSNHKKERVDEDQKLYTDDEDDVYKVNNIAYEDVVGGEDWNPIEEKVESQIQEEVKDSKEEIDKHEEEIEDGMKRSGKLSFLEDEIRRDNKDQMSEDVSKLMNYYLKRLMGSAANRKLRTGGELEEKRAPVLLDKQFNPQSVAQLIEISRSLQIPPEDLIDMLKAGEKKQLQSERLEAEQDMEFPEDLDEIAETNLGQSDLFKNNVISKNGYLKQPLNVMPENLPEDLNIEDIVSLLGADSFANQNPSYLLNRLNPENDLPRLPYAPRRLKGRPIPKAAWLSDLERRQMEYEKLNEKDEELADYLAKVLAKYPEVINVNQVKRVPVPASESDLQEAEGLEQSLREQLSQLGPQEAAKLASLSKRLSLAGESDDTQNRQYLDEDMLGKVLEYLKQEKSELERDHITKRAMENM
SIO_010081: SCG2
subclass of: SO_0000673
so part of: SCG2
location: complement(1467371..1469254)
location: region:1467371-1469254:-1
so has part: feature:1467371-1469254:-1:exon

XP_030311770.1
type: Protein
SIO_000068: ncbiprotein

position:1467371:-1
position: 1467371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1469254:-1
position: 1469254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1467371-1469254:-1:exon

SCG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SCG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: secretogranin-2
translation: MAKPKTSQLESACALTFLLVVICGVDAASFQQHQLLQKDPDYVMKNLQRFPNPDMIKALEYIEDLRKQANKGESSPDYSSYQSGPYLLQQKESKDQVHLADNVRDSLTEDESQWVKVMLEALRQAEKESKVGPKESKPYGLSPDSNFPAGITDDYEAYKWPERWQKYLKMPLGHYEESSRDSPFKRTNEIVEEQYTPQSLATLESVFQELGKMAGPSNHKKERVDEDQKLYTDDEDDVYKVNNIAYEDVVGGEDWNPIEEKVESQIQEEVKDSKEEIDKHEEEIEDGMKRSGKLSFLEDEIRRDNKDQMSEDVSKLMNYYLKRLMGSAANRKLRTGGELEEKRAPVLLDKQFNPQSVAQLIEISRSLQIPPEDLIDMLKAGEKKQLQSERLEAEQDMEFPEDLDEIAETNLGQSDLFKNNVISKNGYLKQPLNVMPENLPEDLNIEDIVSLLGADSFANQNPSYLLNRLNPENDLPRLPYAPRRLKGRPIPKAAWLSDLERRQMEYEKLNEKDEELADYLAKVLAKYPEVINVNQVKRVPVPASESDLQEAEGLEQSLREQLSQLGPQEAAKLASLSKRLSLAGESDDTQNRQYLDEDMLGKVLEYLKQEKSELERDHITKRAMENM
SIO_010081: SCG2
subclass of: SO_0000673
so part of: SCG2
location: complement(1467371..1469254)
location: region:1467371-1469254:-1
so has part: feature:1467371-1469254:-1:exon

XP_030311771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1467371-1469254:-1:exon

SCG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SCG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: secretogranin-2
translation: MAKPKTSQLESACALTFLLVVICGVDAASFQQHQLLQKDPDYVMKNLQRFPNPDMIKALEYIEDLRKQANKGESSPDYSSYQSGPYLLQQKESKDQVHLADNVRDSLTEDESQWVKVMLEALRQAEKESKVGPKESKPYGLSPDSNFPAGITDDYEAYKWPERWQKYLKMPLGHYEESSRDSPFKRTNEIVEEQYTPQSLATLESVFQELGKMAGPSNHKKERVDEDQKLYTDDEDDVYKVNNIAYEDVVGGEDWNPIEEKVESQIQEEVKDSKEEIDKHEEEIEDGMKRSGKLSFLEDEIRRDNKDQMSEDVSKLMNYYLKRLMGSAANRKLRTGGELEEKRAPVLLDKQFNPQSVAQLIEISRSLQIPPEDLIDMLKAGEKKQLQSERLEAEQDMEFPEDLDEIAETNLGQSDLFKNNVISKNGYLKQPLNVMPENLPEDLNIEDIVSLLGADSFANQNPSYLLNRLNPENDLPRLPYAPRRLKGRPIPKAAWLSDLERRQMEYEKLNEKDEELADYLAKVLAKYPEVINVNQVKRVPVPASESDLQEAEGLEQSLREQLSQLGPQEAAKLASLSKRLSLAGESDDTQNRQYLDEDMLGKVLEYLKQEKSELERDHITKRAMENM
SIO_010081: SCG2
subclass of: SO_0000673
so part of: SCG2
location: complement(1467371..1469254)
location: region:1467371-1469254:-1
so has part: feature:1467371-1469254:-1:exon

XP_030311772.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1467371-1469254:-1:exon

SCG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SCG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: secretogranin-2
translation: MAKPKTSQLESACALTFLLVVICGVDAASFQQHQLLQKDPDYVMKNLQRFPNPDMIKALEYIEDLRKQANKGESSPDYSSYQSGPYLLQQKESKDQVHLADNVRDSLTEDESQWVKVMLEALRQAEKESKVGPKESKPYGLSPDSNFPAGITDDYEAYKWPERWQKYLKMPLGHYEESSRDSPFKRTNEIVEEQYTPQSLATLESVFQELGKMAGPSNHKKERVDEDQKLYTDDEDDVYKVNNIAYEDVVGGEDWNPIEEKVESQIQEEVKDSKEEIDKHEEEIEDGMKRSGKLSFLEDEIRRDNKDQMSEDVSKLMNYYLKRLMGSAANRKLRTGGELEEKRAPVLLDKQFNPQSVAQLIEISRSLQIPPEDLIDMLKAGEKKQLQSERLEAEQDMEFPEDLDEIAETNLGQSDLFKNNVISKNGYLKQPLNVMPENLPEDLNIEDIVSLLGADSFANQNPSYLLNRLNPENDLPRLPYAPRRLKGRPIPKAAWLSDLERRQMEYEKLNEKDEELADYLAKVLAKYPEVINVNQVKRVPVPASESDLQEAEGLEQSLREQLSQLGPQEAAKLASLSKRLSLAGESDDTQNRQYLDEDMLGKVLEYLKQEKSELERDHITKRAMENM
SIO_010081: SCG2
subclass of: SO_0000673
so part of: SCG2
location: complement(1467371..1469254)
location: region:1467371-1469254:-1
so has part: feature:1467371-1469254:-1:exon

XP_030311773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1467371-1469254:-1:exon

AP1S3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: AP1S3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1506447..1526259)
location: region:1506447-1526259:-1
so has part: feature:1506447-1526259:-1:exon
subclass of: SO_0000010

103527095
type: Gene
SIO_000068: ncbigene

position:1506447:-1
position: 1506447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1526259:-1
position: 1526259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1506447-1526259:-1:exon

AP1S3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: AP1S3
product: adaptor related protein complex 1 subunit sigma 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 19 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030456195.1
SIO_010081: AP1S3
subclass of: SO_0000673
so part of: AP1S3
location: complement(join(1506447..1506917,1507884..1508021,1508962..1509070,1510280..1510458,1522739..1522799))
location: region:1506447-1522799:-1
so has part: feature:1522739-1522799:-1:exon
so has part: feature:1510280-1510458:-1:exon
so has part: feature:1508962-1509070:-1:exon
so has part: feature:1507884-1508021:-1:exon
so has part: feature:1506447-1506917:-1:exon

position:1522799:-1
position: 1522799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1522739-1522799:-1:exon

position:1522739:-1
position: 1522739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1510280-1510458:-1:exon

position:1510280:-1
position: 1510280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1510458:-1
position: 1510458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1508962-1509070:-1:exon

position:1508962:-1
position: 1508962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1509070:-1
position: 1509070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1507884-1508021:-1:exon

position:1507884:-1
position: 1507884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1508021:-1
position: 1508021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1506447-1506917:-1:exon

position:1506917:-1
position: 1506917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AP1S3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: AP1S3
product: adaptor related protein complex 1 subunit sigma 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030456194.1
SIO_010081: AP1S3
subclass of: SO_0000673
so part of: AP1S3
location: complement(join(1506456..1506917,1507884..1508021,1508962..1509070,1510280..1510458,1526182..1526259))
location: region:1506456-1526259:-1
so has part: feature:1526182-1526259:-1:exon
so has part: feature:1510280-1510458:-1:exon
so has part: feature:1508962-1509070:-1:exon
so has part: feature:1507884-1508021:-1:exon
so has part: feature:1506456-1506917:-1:exon

position:1506456:-1
position: 1506456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1526182-1526259:-1:exon

position:1526182:-1
position: 1526182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1510280-1510458:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1508962-1509070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1507884-1508021:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1506456-1506917:-1:exon

AP1S3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: AP1S3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit sigma-3 isoform X1
translation: MNCEPLYLHWNHRFGRVKSAKEIHFILLFSRQGKLRLQKWYTTLPEKEKKKIIREIIQIVLSRNQKTSSFVDWKDLKLVYKRYASLYFCCAIEDQDNELLTLEVVHRYVELLDRYFGNVCELDIIFNFEKAYFILDEFIIGGEVQETSKRSAVKAIEDSDMLQETVEEYMNKPAF
SIO_010081: AP1S3
subclass of: SO_0000673
so part of: AP1S3
location: complement(join(1506882..1506917,1507884..1508021,1508962..1509070,1510280..1510458,1526182..1526247))
location: region:1506882-1526247:-1
so has part: feature:1526182-1526247:-1:exon
so has part: feature:1510280-1510458:-1:exon
so has part: feature:1508962-1509070:-1:exon
so has part: feature:1507884-1508021:-1:exon
so has part: feature:1506882-1506917:-1:exon

XP_030312054.1
type: Protein
SIO_000068: ncbiprotein

position:1506882:-1
position: 1506882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1526247:-1
position: 1526247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1526182-1526247:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1510280-1510458:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1508962-1509070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1507884-1508021:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1506882-1506917:-1:exon

AP1S3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: AP1S3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit sigma-3 isoform X2
translation: MIHFILLFSRQGKLRLQKWYTTLPEKEKKKIIREIIQIVLSRNQKTSSFVDWKDLKLVYKRYASLYFCCAIEDQDNELLTLEVVHRYVELLDRYFGNVCELDIIFNFEKAYFILDEFIIGGEVQETSKRSAVKAIEDSDMLQETVEEYMNKPAF
SIO_010081: AP1S3
subclass of: SO_0000673
so part of: AP1S3
location: complement(join(1506882..1506917,1507884..1508021,1508962..1509070,1510280..1510458,1522739..1522741))
location: region:1506882-1522741:-1
so has part: feature:1522739-1522741:-1:exon
so has part: feature:1510280-1510458:-1:exon
so has part: feature:1508962-1509070:-1:exon
so has part: feature:1507884-1508021:-1:exon
so has part: feature:1506882-1506917:-1:exon

XP_030312055.1
type: Protein
SIO_000068: ncbiprotein

position:1522741:-1
position: 1522741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1522739-1522741:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1510280-1510458:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1508962-1509070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1507884-1508021:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1506882-1506917:-1:exon

LOC115598751
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115598751
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1522865..1528246
location: region:1522865-1528246:1
so has part: feature:1522865-1528246:1:exon
subclass of: SO_0000011

115598751
type: Gene
SIO_000068: ncbigene

position:1522865:1
position: 1522865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1528246:1
position: 1528246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1522865-1528246:1:exon

LOC115598751
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115598751
product: uncharacterized LOC115598751
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003987897.1
SIO_010081: LOC115598751
subclass of: SO_0000673
so part of: LOC115598751
location: join(1522865..1522946,1524626..1524706,1528097..1528246)
location: region:1522865-1528246:1
so has part: feature:1522865-1522946:1:exon
so has part: feature:1524626-1524706:1:exon
so has part: feature:1528097-1528246:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1522865-1522946:1:exon

position:1522946:1
position: 1522946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1524626-1524706:1:exon

position:1524626:1
position: 1524626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1524706:1
position: 1524706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1528097-1528246:1:exon

position:1528097:1
position: 1528097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCNE4
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: KCNE4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1640697..1642121)
location: region:1640697-1642121:-1
so has part: feature:1640697-1642121:-1:exon
subclass of: SO_0000010

103526364
type: Gene
SIO_000068: ncbigene

position:1640697:-1
position: 1640697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1642121:-1
position: 1642121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1640697-1642121:-1:exon

KCNE4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: KCNE4
product: potassium voltage-gated channel subfamily E regulatory subunit 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_008491459.2
SIO_010081: KCNE4
subclass of: SO_0000673
so part of: KCNE4
location: complement(join(1640697..1641630,1642060..1642121))
location: region:1640697-1642121:-1
so has part: feature:1642060-1642121:-1:exon
so has part: feature:1640697-1641630:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1642060-1642121:-1:exon

position:1642060:-1
position: 1642060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1640697-1641630:-1:exon

position:1641630:-1
position: 1641630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KCNE4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: KCNE4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium voltage-gated channel subfamily E member 4
translation: MLKMDHANMTQAMLDAESRSTESNNSNEYFYILIVMSFYGIFLIGIMLGYMKSKRKEKSSNLLLLYKDEEREWGEAVKPLPTISGLKSAQIPMMLNMLQESMVPSLSCAICSMEGSSVSSESSSPDVHFTIQEEVLDAELGEVSETLLESSEGSAENIHKNS
SIO_010081: KCNE4
subclass of: SO_0000673
so part of: KCNE4
location: complement(1641116..1641604)
location: region:1641116-1641604:-1
so has part: feature:1641116-1641604:-1:exon

XP_008489681.1
type: Protein
SIO_000068: ncbiprotein

position:1641116:-1
position: 1641116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1641604:-1
position: 1641604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1641116-1641604:-1:exon

ACSL3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ACSL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1656089..1707189)
location: region:1656089-1707189:-1
so has part: feature:1656089-1707189:-1:exon
subclass of: SO_0000010

103526458
type: Gene
SIO_000068: ncbigene

position:1656089:-1
position: 1656089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1707189:-1
position: 1707189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1656089-1707189:-1:exon

ACSL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ACSL3
product: acyl-CoA synthetase long chain family member 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 4 long SRA reads, 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030456029.1
SIO_010081: ACSL3
subclass of: SO_0000673
so part of: ACSL3
location: complement(join(1656089..1660220,1662784..1662941,1667680..1667794,1669003..1669194,1670149..1670223,1671242..1671414,1673265..1673404,1673875..1673946,1674258..1674381,1675953..1676103,1677587..1677725,1678893..1679002,1683839..1684016,1691143..1691563,1694728..1694831,1707072..1707189))
location: region:1656089-1707189:-1
so has part: feature:1707072-1707189:-1:exon
so has part: feature:1694728-1694831:-1:exon
so has part: feature:1691143-1691563:-1:exon
so has part: feature:1683839-1684016:-1:exon
so has part: feature:1678893-1679002:-1:exon
so has part: feature:1677587-1677725:-1:exon
so has part: feature:1675953-1676103:-1:exon
so has part: feature:1674258-1674381:-1:exon
so has part: feature:1673875-1673946:-1:exon
so has part: feature:1673265-1673404:-1:exon
so has part: feature:1671242-1671414:-1:exon
so has part: feature:1670149-1670223:-1:exon
so has part: feature:1669003-1669194:-1:exon
so has part: feature:1667680-1667794:-1:exon
so has part: feature:1662784-1662941:-1:exon
so has part: feature:1656089-1660220:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1707072-1707189:-1:exon

position:1707072:-1
position: 1707072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1694728-1694831:-1:exon

position:1694728:-1
position: 1694728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1694831:-1
position: 1694831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1691143-1691563:-1:exon

position:1691143:-1
position: 1691143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1691563:-1
position: 1691563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1683839-1684016:-1:exon

position:1683839:-1
position: 1683839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1684016:-1
position: 1684016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1678893-1679002:-1:exon

position:1678893:-1
position: 1678893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1679002:-1
position: 1679002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1677587-1677725:-1:exon

position:1677587:-1
position: 1677587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1677725:-1
position: 1677725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1675953-1676103:-1:exon

position:1675953:-1
position: 1675953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1676103:-1
position: 1676103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1674258-1674381:-1:exon

position:1674258:-1
position: 1674258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1674381:-1
position: 1674381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1673875-1673946:-1:exon

position:1673875:-1
position: 1673875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1673946:-1
position: 1673946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1673265-1673404:-1:exon

position:1673265:-1
position: 1673265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1673404:-1
position: 1673404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1671242-1671414:-1:exon

position:1671242:-1
position: 1671242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1671414:-1
position: 1671414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1670149-1670223:-1:exon

position:1670149:-1
position: 1670149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1670223:-1
position: 1670223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1669003-1669194:-1:exon

position:1669003:-1
position: 1669003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1669194:-1
position: 1669194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1667680-1667794:-1:exon

position:1667680:-1
position: 1667680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1667794:-1
position: 1667794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1662784-1662941:-1:exon

position:1662784:-1
position: 1662784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1662941:-1
position: 1662941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1656089-1660220:-1:exon

position:1660220:-1
position: 1660220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ACSL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ACSL3
product: acyl-CoA synthetase long chain family member 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 1 long SRA read, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030456034.1
SIO_010081: ACSL3
subclass of: SO_0000673
so part of: ACSL3
location: complement(join(1656089..1660220,1662784..1662941,1667680..1667794,1669003..1669194,1670149..1670223,1671242..1671414,1673265..1673404,1673875..1673946,1674258..1674381,1675953..1676103,1677587..1677725,1678893..1679002,1683839..1684016,1691143..1691563,1707072..1707142))
location: region:1656089-1707142:-1
so has part: feature:1707072-1707142:-1:exon
so has part: feature:1691143-1691563:-1:exon
so has part: feature:1683839-1684016:-1:exon
so has part: feature:1678893-1679002:-1:exon
so has part: feature:1677587-1677725:-1:exon
so has part: feature:1675953-1676103:-1:exon
so has part: feature:1674258-1674381:-1:exon
so has part: feature:1673875-1673946:-1:exon
so has part: feature:1673265-1673404:-1:exon
so has part: feature:1671242-1671414:-1:exon
so has part: feature:1670149-1670223:-1:exon
so has part: feature:1669003-1669194:-1:exon
so has part: feature:1667680-1667794:-1:exon
so has part: feature:1662784-1662941:-1:exon
so has part: feature:1656089-1660220:-1:exon

position:1707142:-1
position: 1707142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1707072-1707142:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1691143-1691563:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1683839-1684016:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1678893-1679002:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1677587-1677725:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1675953-1676103:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1674258-1674381:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1673875-1673946:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1673265-1673404:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1671242-1671414:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1670149-1670223:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1669003-1669194:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1667680-1667794:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1662784-1662941:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1656089-1660220:-1:exon

ACSL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ACSL3
product: acyl-CoA synthetase long chain family member 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 1 long SRA read, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030456031.1
SIO_010081: ACSL3
subclass of: SO_0000673
so part of: ACSL3
location: complement(join(1656089..1660220,1662784..1662941,1667680..1667794,1669003..1669194,1670149..1670223,1671242..1671414,1673265..1673404,1673875..1673946,1674258..1674381,1675953..1676103,1677587..1677725,1678893..1679002,1683839..1684016,1691143..1691563,1694728..1694831,1706599..1706637))
location: region:1656089-1706637:-1
so has part: feature:1706599-1706637:-1:exon
so has part: feature:1694728-1694831:-1:exon
so has part: feature:1691143-1691563:-1:exon
so has part: feature:1683839-1684016:-1:exon
so has part: feature:1678893-1679002:-1:exon
so has part: feature:1677587-1677725:-1:exon
so has part: feature:1675953-1676103:-1:exon
so has part: feature:1674258-1674381:-1:exon
so has part: feature:1673875-1673946:-1:exon
so has part: feature:1673265-1673404:-1:exon
so has part: feature:1671242-1671414:-1:exon
so has part: feature:1670149-1670223:-1:exon
so has part: feature:1669003-1669194:-1:exon
so has part: feature:1667680-1667794:-1:exon
so has part: feature:1662784-1662941:-1:exon
so has part: feature:1656089-1660220:-1:exon

position:1706637:-1
position: 1706637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1706599-1706637:-1:exon

position:1706599:-1
position: 1706599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1694728-1694831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1691143-1691563:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1683839-1684016:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1678893-1679002:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1677587-1677725:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1675953-1676103:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1674258-1674381:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1673875-1673946:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1673265-1673404:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1671242-1671414:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1670149-1670223:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1669003-1669194:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1667680-1667794:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1662784-1662941:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1656089-1660220:-1:exon

ACSL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ACSL3
product: acyl-CoA synthetase long chain family member 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 2 long SRA reads, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030456030.1
SIO_010081: ACSL3
subclass of: SO_0000673
so part of: ACSL3
location: complement(join(1656089..1660220,1662784..1662941,1667680..1667794,1669003..1669194,1670149..1670223,1671242..1671414,1673265..1673404,1673875..1673946,1674258..1674381,1675953..1676103,1677587..1677725,1678893..1679002,1683839..1684016,1691143..1691563,1694728..1694831,1706458..1706580))
location: region:1656089-1706580:-1
so has part: feature:1706458-1706580:-1:exon
so has part: feature:1694728-1694831:-1:exon
so has part: feature:1691143-1691563:-1:exon
so has part: feature:1683839-1684016:-1:exon
so has part: feature:1678893-1679002:-1:exon
so has part: feature:1677587-1677725:-1:exon
so has part: feature:1675953-1676103:-1:exon
so has part: feature:1674258-1674381:-1:exon
so has part: feature:1673875-1673946:-1:exon
so has part: feature:1673265-1673404:-1:exon
so has part: feature:1671242-1671414:-1:exon
so has part: feature:1670149-1670223:-1:exon
so has part: feature:1669003-1669194:-1:exon
so has part: feature:1667680-1667794:-1:exon
so has part: feature:1662784-1662941:-1:exon
so has part: feature:1656089-1660220:-1:exon

position:1706580:-1
position: 1706580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1706458-1706580:-1:exon

position:1706458:-1
position: 1706458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1694728-1694831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1691143-1691563:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1683839-1684016:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1678893-1679002:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1677587-1677725:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1675953-1676103:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1674258-1674381:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1673875-1673946:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1673265-1673404:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1671242-1671414:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1670149-1670223:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1669003-1669194:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1667680-1667794:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1662784-1662941:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1656089-1660220:-1:exon

ACSL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ACSL3
product: acyl-CoA synthetase long chain family member 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 1 long SRA read, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030456033.1
SIO_010081: ACSL3
subclass of: SO_0000673
so part of: ACSL3
location: complement(join(1656089..1660220,1662784..1662941,1667680..1667794,1669003..1669194,1670149..1670223,1671242..1671414,1673265..1673404,1673875..1673946,1674258..1674381,1675953..1676103,1677587..1677725,1678893..1679002,1683839..1684016,1691143..1691563,1694728..1694831,1700279..1700336))
location: region:1656089-1700336:-1
so has part: feature:1700279-1700336:-1:exon
so has part: feature:1694728-1694831:-1:exon
so has part: feature:1691143-1691563:-1:exon
so has part: feature:1683839-1684016:-1:exon
so has part: feature:1678893-1679002:-1:exon
so has part: feature:1677587-1677725:-1:exon
so has part: feature:1675953-1676103:-1:exon
so has part: feature:1674258-1674381:-1:exon
so has part: feature:1673875-1673946:-1:exon
so has part: feature:1673265-1673404:-1:exon
so has part: feature:1671242-1671414:-1:exon
so has part: feature:1670149-1670223:-1:exon
so has part: feature:1669003-1669194:-1:exon
so has part: feature:1667680-1667794:-1:exon
so has part: feature:1662784-1662941:-1:exon
so has part: feature:1656089-1660220:-1:exon

position:1700336:-1
position: 1700336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1700279-1700336:-1:exon

position:1700279:-1
position: 1700279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1694728-1694831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1691143-1691563:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1683839-1684016:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1678893-1679002:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1677587-1677725:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1675953-1676103:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1674258-1674381:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1673875-1673946:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1673265-1673404:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1671242-1671414:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1670149-1670223:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1669003-1669194:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1667680-1667794:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1662784-1662941:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1656089-1660220:-1:exon

ACSL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ACSL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: long-chain-fatty-acid--CoA ligase 3
translation: MKLKHNINPVLLQFINFIILVYSFVMYIPWYIFSGSRQAIEKAKQVKARPVNTKPGSAYRSVNSMHCLASVLYPGCDTLDKVFKYAKTKFKDRKLLGTREILKEEDEIQPSGKVFKKVILGKYTWLSYEDVYIKAVNFGNGLAVLGQQPKTNIAIFCETRAEWMIAAQACFMCNYQLVTLYATLGGPAIVHGLNETEVTTIITSKELMQTKLKEIVSQVPLLRHIITVDGKPTTWSEFPKGVIVHTMASVQAMGAKADAGNKQQARPVPSDIAVIMYTSGSTGVPKGVMISHCNIIAGITGMAERIPNLGEKDIYIGYLPLAHVLELSAELVCLSHGCRIGYSSPQTLADQSSKIKKGSKGDVTTLKPTLMAAVPEIMDRIYKNVMNKVNEMTPFQRNLFILAYNYKMEQISKGYTTPLCDSLIFRKVRMLLGGKIRILLCGGAPLSAATQRFMNICFCCPVGQGYGLTESAGAGTITEVWDYTTGRVGAPLVCCEIKLLNWEEGGYYNTDKPYPRGEILIGGQNVTVGYYKNELRTKKDFTIDENGQRWLHTGDIGEFQPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAALKNLPLVDNICAYASSFHSYVIGFVVPNQKELAELARKKGFKGTWEEICNSPEMEKEVLKVLAEAAMAANLEKFEIPVKIRLSPDPWTPETGLVTDAFKLKRKELTAFYQTDIDRMYGINVK
SIO_010081: ACSL3
subclass of: SO_0000673
so part of: ACSL3
location: complement(join(1660057..1660220,1662784..1662941,1667680..1667794,1669003..1669194,1670149..1670223,1671242..1671414,1673265..1673404,1673875..1673946,1674258..1674381,1675953..1676103,1677587..1677725,1678893..1679002,1683839..1684016,1691143..1691493))
location: region:1660057-1691493:-1
so has part: feature:1691143-1691493:-1:exon
so has part: feature:1683839-1684016:-1:exon
so has part: feature:1678893-1679002:-1:exon
so has part: feature:1677587-1677725:-1:exon
so has part: feature:1675953-1676103:-1:exon
so has part: feature:1674258-1674381:-1:exon
so has part: feature:1673875-1673946:-1:exon
so has part: feature:1673265-1673404:-1:exon
so has part: feature:1671242-1671414:-1:exon
so has part: feature:1670149-1670223:-1:exon
so has part: feature:1669003-1669194:-1:exon
so has part: feature:1667680-1667794:-1:exon
so has part: feature:1662784-1662941:-1:exon
so has part: feature:1660057-1660220:-1:exon

XP_030311889.1
type: Protein
SIO_000068: ncbiprotein

position:1660057:-1
position: 1660057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1691493:-1
position: 1691493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1691143-1691493:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1683839-1684016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1678893-1679002:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1677587-1677725:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1675953-1676103:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1674258-1674381:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1673875-1673946:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1673265-1673404:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1671242-1671414:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1670149-1670223:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1669003-1669194:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1667680-1667794:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1662784-1662941:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1660057-1660220:-1:exon

ACSL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ACSL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: long-chain-fatty-acid--CoA ligase 3
translation: MKLKHNINPVLLQFINFIILVYSFVMYIPWYIFSGSRQAIEKAKQVKARPVNTKPGSAYRSVNSMHCLASVLYPGCDTLDKVFKYAKTKFKDRKLLGTREILKEEDEIQPSGKVFKKVILGKYTWLSYEDVYIKAVNFGNGLAVLGQQPKTNIAIFCETRAEWMIAAQACFMCNYQLVTLYATLGGPAIVHGLNETEVTTIITSKELMQTKLKEIVSQVPLLRHIITVDGKPTTWSEFPKGVIVHTMASVQAMGAKADAGNKQQARPVPSDIAVIMYTSGSTGVPKGVMISHCNIIAGITGMAERIPNLGEKDIYIGYLPLAHVLELSAELVCLSHGCRIGYSSPQTLADQSSKIKKGSKGDVTTLKPTLMAAVPEIMDRIYKNVMNKVNEMTPFQRNLFILAYNYKMEQISKGYTTPLCDSLIFRKVRMLLGGKIRILLCGGAPLSAATQRFMNICFCCPVGQGYGLTESAGAGTITEVWDYTTGRVGAPLVCCEIKLLNWEEGGYYNTDKPYPRGEILIGGQNVTVGYYKNELRTKKDFTIDENGQRWLHTGDIGEFQPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAALKNLPLVDNICAYASSFHSYVIGFVVPNQKELAELARKKGFKGTWEEICNSPEMEKEVLKVLAEAAMAANLEKFEIPVKIRLSPDPWTPETGLVTDAFKLKRKELTAFYQTDIDRMYGINVK
SIO_010081: ACSL3
subclass of: SO_0000673
so part of: ACSL3
location: complement(join(1660057..1660220,1662784..1662941,1667680..1667794,1669003..1669194,1670149..1670223,1671242..1671414,1673265..1673404,1673875..1673946,1674258..1674381,1675953..1676103,1677587..1677725,1678893..1679002,1683839..1684016,1691143..1691493))
location: region:1660057-1691493:-1
so has part: feature:1691143-1691493:-1:exon
so has part: feature:1683839-1684016:-1:exon
so has part: feature:1678893-1679002:-1:exon
so has part: feature:1677587-1677725:-1:exon
so has part: feature:1675953-1676103:-1:exon
so has part: feature:1674258-1674381:-1:exon
so has part: feature:1673875-1673946:-1:exon
so has part: feature:1673265-1673404:-1:exon
so has part: feature:1671242-1671414:-1:exon
so has part: feature:1670149-1670223:-1:exon
so has part: feature:1669003-1669194:-1:exon
so has part: feature:1667680-1667794:-1:exon
so has part: feature:1662784-1662941:-1:exon
so has part: feature:1660057-1660220:-1:exon

XP_030311890.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1691143-1691493:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1683839-1684016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1678893-1679002:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1677587-1677725:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1675953-1676103:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1674258-1674381:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1673875-1673946:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1673265-1673404:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1671242-1671414:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1670149-1670223:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1669003-1669194:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1667680-1667794:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1662784-1662941:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1660057-1660220:-1:exon

ACSL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ACSL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: long-chain-fatty-acid--CoA ligase 3
translation: MKLKHNINPVLLQFINFIILVYSFVMYIPWYIFSGSRQAIEKAKQVKARPVNTKPGSAYRSVNSMHCLASVLYPGCDTLDKVFKYAKTKFKDRKLLGTREILKEEDEIQPSGKVFKKVILGKYTWLSYEDVYIKAVNFGNGLAVLGQQPKTNIAIFCETRAEWMIAAQACFMCNYQLVTLYATLGGPAIVHGLNETEVTTIITSKELMQTKLKEIVSQVPLLRHIITVDGKPTTWSEFPKGVIVHTMASVQAMGAKADAGNKQQARPVPSDIAVIMYTSGSTGVPKGVMISHCNIIAGITGMAERIPNLGEKDIYIGYLPLAHVLELSAELVCLSHGCRIGYSSPQTLADQSSKIKKGSKGDVTTLKPTLMAAVPEIMDRIYKNVMNKVNEMTPFQRNLFILAYNYKMEQISKGYTTPLCDSLIFRKVRMLLGGKIRILLCGGAPLSAATQRFMNICFCCPVGQGYGLTESAGAGTITEVWDYTTGRVGAPLVCCEIKLLNWEEGGYYNTDKPYPRGEILIGGQNVTVGYYKNELRTKKDFTIDENGQRWLHTGDIGEFQPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAALKNLPLVDNICAYASSFHSYVIGFVVPNQKELAELARKKGFKGTWEEICNSPEMEKEVLKVLAEAAMAANLEKFEIPVKIRLSPDPWTPETGLVTDAFKLKRKELTAFYQTDIDRMYGINVK
SIO_010081: ACSL3
subclass of: SO_0000673
so part of: ACSL3
location: complement(join(1660057..1660220,1662784..1662941,1667680..1667794,1669003..1669194,1670149..1670223,1671242..1671414,1673265..1673404,1673875..1673946,1674258..1674381,1675953..1676103,1677587..1677725,1678893..1679002,1683839..1684016,1691143..1691493))
location: region:1660057-1691493:-1
so has part: feature:1691143-1691493:-1:exon
so has part: feature:1683839-1684016:-1:exon
so has part: feature:1678893-1679002:-1:exon
so has part: feature:1677587-1677725:-1:exon
so has part: feature:1675953-1676103:-1:exon
so has part: feature:1674258-1674381:-1:exon
so has part: feature:1673875-1673946:-1:exon
so has part: feature:1673265-1673404:-1:exon
so has part: feature:1671242-1671414:-1:exon
so has part: feature:1670149-1670223:-1:exon
so has part: feature:1669003-1669194:-1:exon
so has part: feature:1667680-1667794:-1:exon
so has part: feature:1662784-1662941:-1:exon
so has part: feature:1660057-1660220:-1:exon

XP_030311891.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1691143-1691493:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1683839-1684016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1678893-1679002:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1677587-1677725:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1675953-1676103:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1674258-1674381:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1673875-1673946:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1673265-1673404:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1671242-1671414:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1670149-1670223:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1669003-1669194:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1667680-1667794:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1662784-1662941:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1660057-1660220:-1:exon

ACSL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ACSL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: long-chain-fatty-acid--CoA ligase 3
translation: MKLKHNINPVLLQFINFIILVYSFVMYIPWYIFSGSRQAIEKAKQVKARPVNTKPGSAYRSVNSMHCLASVLYPGCDTLDKVFKYAKTKFKDRKLLGTREILKEEDEIQPSGKVFKKVILGKYTWLSYEDVYIKAVNFGNGLAVLGQQPKTNIAIFCETRAEWMIAAQACFMCNYQLVTLYATLGGPAIVHGLNETEVTTIITSKELMQTKLKEIVSQVPLLRHIITVDGKPTTWSEFPKGVIVHTMASVQAMGAKADAGNKQQARPVPSDIAVIMYTSGSTGVPKGVMISHCNIIAGITGMAERIPNLGEKDIYIGYLPLAHVLELSAELVCLSHGCRIGYSSPQTLADQSSKIKKGSKGDVTTLKPTLMAAVPEIMDRIYKNVMNKVNEMTPFQRNLFILAYNYKMEQISKGYTTPLCDSLIFRKVRMLLGGKIRILLCGGAPLSAATQRFMNICFCCPVGQGYGLTESAGAGTITEVWDYTTGRVGAPLVCCEIKLLNWEEGGYYNTDKPYPRGEILIGGQNVTVGYYKNELRTKKDFTIDENGQRWLHTGDIGEFQPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAALKNLPLVDNICAYASSFHSYVIGFVVPNQKELAELARKKGFKGTWEEICNSPEMEKEVLKVLAEAAMAANLEKFEIPVKIRLSPDPWTPETGLVTDAFKLKRKELTAFYQTDIDRMYGINVK
SIO_010081: ACSL3
subclass of: SO_0000673
so part of: ACSL3
location: complement(join(1660057..1660220,1662784..1662941,1667680..1667794,1669003..1669194,1670149..1670223,1671242..1671414,1673265..1673404,1673875..1673946,1674258..1674381,1675953..1676103,1677587..1677725,1678893..1679002,1683839..1684016,1691143..1691493))
location: region:1660057-1691493:-1
so has part: feature:1691143-1691493:-1:exon
so has part: feature:1683839-1684016:-1:exon
so has part: feature:1678893-1679002:-1:exon
so has part: feature:1677587-1677725:-1:exon
so has part: feature:1675953-1676103:-1:exon
so has part: feature:1674258-1674381:-1:exon
so has part: feature:1673875-1673946:-1:exon
so has part: feature:1673265-1673404:-1:exon
so has part: feature:1671242-1671414:-1:exon
so has part: feature:1670149-1670223:-1:exon
so has part: feature:1669003-1669194:-1:exon
so has part: feature:1667680-1667794:-1:exon
so has part: feature:1662784-1662941:-1:exon
so has part: feature:1660057-1660220:-1:exon

XP_030311893.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1691143-1691493:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1683839-1684016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1678893-1679002:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1677587-1677725:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1675953-1676103:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1674258-1674381:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1673875-1673946:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1673265-1673404:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1671242-1671414:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1670149-1670223:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1669003-1669194:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1667680-1667794:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1662784-1662941:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1660057-1660220:-1:exon

ACSL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ACSL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: long-chain-fatty-acid--CoA ligase 3
translation: MKLKHNINPVLLQFINFIILVYSFVMYIPWYIFSGSRQAIEKAKQVKARPVNTKPGSAYRSVNSMHCLASVLYPGCDTLDKVFKYAKTKFKDRKLLGTREILKEEDEIQPSGKVFKKVILGKYTWLSYEDVYIKAVNFGNGLAVLGQQPKTNIAIFCETRAEWMIAAQACFMCNYQLVTLYATLGGPAIVHGLNETEVTTIITSKELMQTKLKEIVSQVPLLRHIITVDGKPTTWSEFPKGVIVHTMASVQAMGAKADAGNKQQARPVPSDIAVIMYTSGSTGVPKGVMISHCNIIAGITGMAERIPNLGEKDIYIGYLPLAHVLELSAELVCLSHGCRIGYSSPQTLADQSSKIKKGSKGDVTTLKPTLMAAVPEIMDRIYKNVMNKVNEMTPFQRNLFILAYNYKMEQISKGYTTPLCDSLIFRKVRMLLGGKIRILLCGGAPLSAATQRFMNICFCCPVGQGYGLTESAGAGTITEVWDYTTGRVGAPLVCCEIKLLNWEEGGYYNTDKPYPRGEILIGGQNVTVGYYKNELRTKKDFTIDENGQRWLHTGDIGEFQPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAALKNLPLVDNICAYASSFHSYVIGFVVPNQKELAELARKKGFKGTWEEICNSPEMEKEVLKVLAEAAMAANLEKFEIPVKIRLSPDPWTPETGLVTDAFKLKRKELTAFYQTDIDRMYGINVK
SIO_010081: ACSL3
subclass of: SO_0000673
so part of: ACSL3
location: complement(join(1660057..1660220,1662784..1662941,1667680..1667794,1669003..1669194,1670149..1670223,1671242..1671414,1673265..1673404,1673875..1673946,1674258..1674381,1675953..1676103,1677587..1677725,1678893..1679002,1683839..1684016,1691143..1691493))
location: region:1660057-1691493:-1
so has part: feature:1691143-1691493:-1:exon
so has part: feature:1683839-1684016:-1:exon
so has part: feature:1678893-1679002:-1:exon
so has part: feature:1677587-1677725:-1:exon
so has part: feature:1675953-1676103:-1:exon
so has part: feature:1674258-1674381:-1:exon
so has part: feature:1673875-1673946:-1:exon
so has part: feature:1673265-1673404:-1:exon
so has part: feature:1671242-1671414:-1:exon
so has part: feature:1670149-1670223:-1:exon
so has part: feature:1669003-1669194:-1:exon
so has part: feature:1667680-1667794:-1:exon
so has part: feature:1662784-1662941:-1:exon
so has part: feature:1660057-1660220:-1:exon

XP_030311894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1691143-1691493:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1683839-1684016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1678893-1679002:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1677587-1677725:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1675953-1676103:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1674258-1674381:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1673875-1673946:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1673265-1673404:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1671242-1671414:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1670149-1670223:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1669003-1669194:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1667680-1667794:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1662784-1662941:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1660057-1660220:-1:exon

ACSL3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9244
gene: ACSL3
product: acyl-CoA synthetase long chain family member 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_003987887.1
SIO_010081: ACSL3
so part of: ACSL3
location: complement(join(1662869..1662941,1663144..1663337,1667680..1667794,1669003..1669194,1670149..1670223,1671242..1671414,1673265..1673404,1673875..1673946,1674258..1674381,1675953..1676103,1677587..1677725,1678893..1679002,1683839..1684016,1691143..1691563,1694728..1694831,1707072..1707153))
location: region:1662869-1707153:-1
so has part: feature:1707072-1707153:-1:exon
so has part: feature:1694728-1694831:-1:exon
so has part: feature:1691143-1691563:-1:exon
so has part: feature:1683839-1684016:-1:exon
so has part: feature:1678893-1679002:-1:exon
so has part: feature:1677587-1677725:-1:exon
so has part: feature:1675953-1676103:-1:exon
so has part: feature:1674258-1674381:-1:exon
so has part: feature:1673875-1673946:-1:exon
so has part: feature:1673265-1673404:-1:exon
so has part: feature:1671242-1671414:-1:exon
so has part: feature:1670149-1670223:-1:exon
so has part: feature:1669003-1669194:-1:exon
so has part: feature:1667680-1667794:-1:exon
so has part: feature:1663144-1663337:-1:exon
so has part: feature:1662869-1662941:-1:exon

position:1662869:-1
position: 1662869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1707153:-1
position: 1707153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1707072-1707153:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1694728-1694831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1691143-1691563:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1683839-1684016:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1678893-1679002:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1677587-1677725:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1675953-1676103:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1674258-1674381:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1673875-1673946:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1673265-1673404:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1671242-1671414:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1670149-1670223:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1669003-1669194:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1667680-1667794:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1663144-1663337:-1:exon

position:1663144:-1
position: 1663144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1663337:-1
position: 1663337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1662869-1662941:-1:exon

MOGAT1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: MOGAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1733335..1755038)
location: region:1733335-1755038:-1
so has part: feature:1733335-1755038:-1:exon
subclass of: SO_0000010

103526566
type: Gene
SIO_000068: ncbigene

position:1733335:-1
position: 1733335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1755038:-1
position: 1755038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1733335-1755038:-1:exon

MOGAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MOGAT1
product: monoacylglycerol O-acyltransferase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_008491687.2
SIO_010081: MOGAT1
subclass of: SO_0000673
so part of: MOGAT1
location: complement(join(1733335..1733678,1736417..1736616,1740898..1741072,1744095..1744296,1744649..1744827,1754829..1755038))
location: region:1733335-1755038:-1
so has part: feature:1754829-1755038:-1:exon
so has part: feature:1744649-1744827:-1:exon
so has part: feature:1744095-1744296:-1:exon
so has part: feature:1740898-1741072:-1:exon
so has part: feature:1736417-1736616:-1:exon
so has part: feature:1733335-1733678:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1754829-1755038:-1:exon

position:1754829:-1
position: 1754829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1744649-1744827:-1:exon

position:1744649:-1
position: 1744649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1744827:-1
position: 1744827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1744095-1744296:-1:exon

position:1744095:-1
position: 1744095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1744296:-1
position: 1744296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1740898-1741072:-1:exon

position:1740898:-1
position: 1740898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1741072:-1
position: 1741072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1736417-1736616:-1:exon

position:1736417:-1
position: 1736417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1736616:-1
position: 1736616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1733335-1733678:-1:exon

position:1733678:-1
position: 1733678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MOGAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MOGAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 2-acylglycerol O-acyltransferase 1
translation: MKVEFAPINVPLQRRIQTVAVLQWIFSFLLLAEFCCGFFVILILGNFWFLAVLYLLWLYLDWETPCRGGRRSQWVRSWTVWKYFRDYFPIHLVKTSELSPNHNYLLGFHPHGVLVAGAFGNFCTGPSFQNLFPGLTPYLHIMPIWFGCPFFREYIMSAGMVSASKESVSYVLNNEEGGHASIIVIGGAEESLNAHPGSLTLNILKKKGFIKMALTHGAHLVPVFSFGENEIFKQVANPRGSWLRNVQERLQKIMGFALPLFHARGVFQYSFGLIPYRQPIHTVVGSPIPVKRNLNPTTEEIEQLHALYLQKLRKLFEEHKRNYGIPEHKSLIFE
SIO_010081: MOGAT1
subclass of: SO_0000673
so part of: MOGAT1
location: complement(join(1733524..1733678,1736417..1736616,1740898..1741072,1744095..1744296,1744649..1744827,1754829..1754922))
location: region:1733524-1754922:-1
so has part: feature:1754829-1754922:-1:exon
so has part: feature:1744649-1744827:-1:exon
so has part: feature:1744095-1744296:-1:exon
so has part: feature:1740898-1741072:-1:exon
so has part: feature:1736417-1736616:-1:exon
so has part: feature:1733524-1733678:-1:exon

XP_008489909.1
type: Protein
SIO_000068: ncbiprotein

position:1733524:-1
position: 1733524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1754922:-1
position: 1754922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1754829-1754922:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1744649-1744827:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1744095-1744296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1740898-1741072:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1736417-1736616:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1733524-1733678:-1:exon

FARSB
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: FARSB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1756077..1794252
location: region:1756077-1794252:1
so has part: feature:1756077-1794252:1:exon
subclass of: SO_0000010

103526759
type: Gene
SIO_000068: ncbigene

position:1756077:1
position: 1756077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1794252:1
position: 1794252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1756077-1794252:1:exon

FARSB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FARSB
product: phenylalanyl-tRNA synthetase subunit beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 ESTs, 2 long SRA reads, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030456549.1
SIO_010081: FARSB
subclass of: SO_0000673
so part of: FARSB
location: join(1756077..1756168,1757260..1757315,1758101..1758255,1759410..1759482,1759937..1760052,1760452..1760602,1761781..1761889,1764184..1764254,1765425..1765486,1765576..1765627,1767170..1767231,1767654..1767861,1768290..1768370,1771209..1771301,1772999..1773116,1778301..1778453,1793574..1794252)
location: region:1756077-1794252:1
so has part: feature:1756077-1756168:1:exon
so has part: feature:1757260-1757315:1:exon
so has part: feature:1758101-1758255:1:exon
so has part: feature:1759410-1759482:1:exon
so has part: feature:1759937-1760052:1:exon
so has part: feature:1760452-1760602:1:exon
so has part: feature:1761781-1761889:1:exon
so has part: feature:1764184-1764254:1:exon
so has part: feature:1765425-1765486:1:exon
so has part: feature:1765576-1765627:1:exon
so has part: feature:1767170-1767231:1:exon
so has part: feature:1767654-1767861:1:exon
so has part: feature:1768290-1768370:1:exon
so has part: feature:1771209-1771301:1:exon
so has part: feature:1772999-1773116:1:exon
so has part: feature:1778301-1778453:1:exon
so has part: feature:1793574-1794252:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1756077-1756168:1:exon

position:1756168:1
position: 1756168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1757260-1757315:1:exon

position:1757260:1
position: 1757260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1757315:1
position: 1757315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1758101-1758255:1:exon

position:1758101:1
position: 1758101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1758255:1
position: 1758255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1759410-1759482:1:exon

position:1759410:1
position: 1759410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1759482:1
position: 1759482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1759937-1760052:1:exon

position:1759937:1
position: 1759937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1760052:1
position: 1760052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1760452-1760602:1:exon

position:1760452:1
position: 1760452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1760602:1
position: 1760602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1761781-1761889:1:exon

position:1761781:1
position: 1761781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1761889:1
position: 1761889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1764184-1764254:1:exon

position:1764184:1
position: 1764184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1764254:1
position: 1764254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1765425-1765486:1:exon

position:1765425:1
position: 1765425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1765486:1
position: 1765486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1765576-1765627:1:exon

position:1765576:1
position: 1765576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1765627:1
position: 1765627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1767170-1767231:1:exon

position:1767170:1
position: 1767170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1767231:1
position: 1767231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1767654-1767861:1:exon

position:1767654:1
position: 1767654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1767861:1
position: 1767861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1768290-1768370:1:exon

position:1768290:1
position: 1768290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1768370:1
position: 1768370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1771209-1771301:1:exon

position:1771209:1
position: 1771209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1771301:1
position: 1771301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1772999-1773116:1:exon

position:1772999:1
position: 1772999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1773116:1
position: 1773116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1778301-1778453:1:exon

position:1778301:1
position: 1778301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1778453:1
position: 1778453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1793574-1794252:1:exon

position:1793574:1
position: 1793574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FARSB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FARSB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phenylalanine--tRNA ligase beta subunit
translation: MPTVSVQRDVLFQALGRTYTDEEFDELCFEFGLELDEITSEKDIISKEKGGEKAKGASETVLYKIDVPANRYDLLCLEGLVRGLQIFKERINIPRYEKIIPAEGERQKLMITAETGQVRPHAVAAVLRNITFTKERYESFIDLQEKLHQNICRRRKLVAIGTHDLDTISGPFTFTAKAPSEIKFKPLNQSKEYTASQIMDLYRTDSHLRHYLHLIENKPLYPVIYDSNGVVLSMPPIINGDHTKISIKTRNVFIECTGTDITKAKIVLDTIVTMFSEYCEKPFTVEAAEVVYPSGKTHIYPELAYRKEKVKPELINKKLGISETPSSLAKLLTRMCLKSDVIGNGNNLEVEIPPTRSDIMHACDIIEDAAIAYGYNNIQMTIPKTYTMANQLPLNKLTELLRLDLAAAGFTEALTFALCSQEDIADKLGMDISATNAVHIANPKTAEFQVARTTLVPGLLKTIAANRKMPLPLKLFEVSDIVVKDPNTDVGARNYRHLGAVYYNKSPGFEIMHGLLDRVMQLLDIPPHEENGYTIKATEASAFFPGRCAEIFAKGQSIGKLGVLHPDVITKFELTMPCSALEINIEPFV
SIO_010081: FARSB
subclass of: SO_0000673
so part of: FARSB
location: join(1756111..1756168,1757260..1757315,1758101..1758255,1759410..1759482,1759937..1760052,1760452..1760602,1761781..1761889,1764184..1764254,1765425..1765486,1765576..1765627,1767170..1767231,1767654..1767861,1768290..1768370,1771209..1771301,1772999..1773116,1778301..1778453,1793574..1793725)
location: region:1756111-1793725:1
so has part: feature:1756111-1756168:1:exon
so has part: feature:1757260-1757315:1:exon
so has part: feature:1758101-1758255:1:exon
so has part: feature:1759410-1759482:1:exon
so has part: feature:1759937-1760052:1:exon
so has part: feature:1760452-1760602:1:exon
so has part: feature:1761781-1761889:1:exon
so has part: feature:1764184-1764254:1:exon
so has part: feature:1765425-1765486:1:exon
so has part: feature:1765576-1765627:1:exon
so has part: feature:1767170-1767231:1:exon
so has part: feature:1767654-1767861:1:exon
so has part: feature:1768290-1768370:1:exon
so has part: feature:1771209-1771301:1:exon
so has part: feature:1772999-1773116:1:exon
so has part: feature:1778301-1778453:1:exon
so has part: feature:1793574-1793725:1:exon

XP_030312409.1
type: Protein
SIO_000068: ncbiprotein

position:1756111:1
position: 1756111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1793725:1
position: 1793725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1756111-1756168:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1757260-1757315:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1758101-1758255:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1759410-1759482:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1759937-1760052:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1760452-1760602:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1761781-1761889:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1764184-1764254:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1765425-1765486:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1765576-1765627:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1767170-1767231:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1767654-1767861:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1768290-1768370:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1771209-1771301:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1772999-1773116:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1778301-1778453:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1793574-1793725:1:exon

SGPP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SGPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1799513..1832870)
location: region:1799513-1832870:-1
so has part: feature:1799513-1832870:-1:exon
subclass of: SO_0000010

103526865
type: Gene
SIO_000068: ncbigene

position:1799513:-1
position: 1799513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1832870:-1
position: 1832870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1799513-1832870:-1:exon

SGPP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SGPP2
product: sphingosine-1-phosphate phosphatase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030456231.1
SIO_010081: SGPP2
subclass of: SO_0000673
so part of: SGPP2
location: complement(join(1799513..1801108,1808286..1808375,1810537..1810716,1820596..1820754,1832658..1832870))
location: region:1799513-1832870:-1
so has part: feature:1832658-1832870:-1:exon
so has part: feature:1820596-1820754:-1:exon
so has part: feature:1810537-1810716:-1:exon
so has part: feature:1808286-1808375:-1:exon
so has part: feature:1799513-1801108:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1832658-1832870:-1:exon

position:1832658:-1
position: 1832658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1820596-1820754:-1:exon

position:1820596:-1
position: 1820596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1820754:-1
position: 1820754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1810537-1810716:-1:exon

position:1810537:-1
position: 1810537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1810716:-1
position: 1810716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1808286-1808375:-1:exon

position:1808286:-1
position: 1808286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1808375:-1
position: 1808375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1799513-1801108:-1:exon

position:1801108:-1
position: 1801108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SGPP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SGPP2
product: sphingosine-1-phosphate phosphatase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030456232.1
SIO_010081: SGPP2
subclass of: SO_0000673
so part of: SGPP2
location: complement(join(1799513..1801108,1808286..1808375,1810537..1810716,1832658..1832709))
location: region:1799513-1832709:-1
so has part: feature:1832658-1832709:-1:exon
so has part: feature:1810537-1810716:-1:exon
so has part: feature:1808286-1808375:-1:exon
so has part: feature:1799513-1801108:-1:exon

position:1832709:-1
position: 1832709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1832658-1832709:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1810537-1810716:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1808286-1808375:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1799513-1801108:-1:exon

SGPP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SGPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sphingosine-1-phosphate phosphatase 2 isoform X1
translation: MSSLLGTLRSSQPVARFQRCCGLFLAGEESGGDPAEGARDRGACNGTVASRRPAAPSRGASNGLRSGSGPQGCAQKYIVKNYFYYYLFKFSAALGEEIFYITFLPFTYWNIDHSVSRRMIIIWSIVMYIGQVSKDILKWPRPLSPPVVKLEMRTDAEYGMPSTHAMAATAISFSFLIATANQYKYPFELGLAAAFVFSVLVCLSRLYTGMHTVLDVIGGALISAVLLVLLYPAWDTIDHLLLTSPFCPLLSLVVPLVLCYNYPKLDYYSPTRGDTTTILGAGAGATVGFWLNNKYASPAYTSQNFQLGFPLITSKMVLVMLARFSIGIFVILLTRRVMKAVVLGVLGYRYRFAMGDLEARRRLEVEVPYKFITYSSVGFCATVLVPLLHELLGLL
SIO_010081: SGPP2
subclass of: SO_0000673
so part of: SGPP2
location: complement(join(1800563..1801108,1808286..1808375,1810537..1810716,1820596..1820754,1832658..1832870))
location: region:1800563-1832870:-1
so has part: feature:1832658-1832870:-1:exon
so has part: feature:1820596-1820754:-1:exon
so has part: feature:1810537-1810716:-1:exon
so has part: feature:1808286-1808375:-1:exon
so has part: feature:1800563-1801108:-1:exon

XP_030312091.1
type: Protein
SIO_000068: ncbiprotein

position:1800563:-1
position: 1800563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1832658-1832870:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1820596-1820754:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1810537-1810716:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1808286-1808375:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1800563-1801108:-1:exon

SGPP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SGPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sphingosine-1-phosphate phosphatase 2 isoform X2
translation: MYIGQVSKDILKWPRPLSPPVVKLEMRTDAEYGMPSTHAMAATAISFSFLIATANQYKYPFELGLAAAFVFSVLVCLSRLYTGMHTVLDVIGGALISAVLLVLLYPAWDTIDHLLLTSPFCPLLSLVVPLVLCYNYPKLDYYSPTRGDTTTILGAGAGATVGFWLNNKYASPAYTSQNFQLGFPLITSKMVLVMLARFSIGIFVILLTRRVMKAVVLGVLGYRYRFAMGDLEARRRLEVEVPYKFITYSSVGFCATVLVPLLHELLGLL
SIO_010081: SGPP2
subclass of: SO_0000673
so part of: SGPP2
location: complement(join(1800563..1801108,1808286..1808375,1810537..1810710))
location: region:1800563-1810710:-1
so has part: feature:1810537-1810710:-1:exon
so has part: feature:1808286-1808375:-1:exon
so has part: feature:1800563-1801108:-1:exon

XP_030312092.1
type: Protein
SIO_000068: ncbiprotein

position:1810710:-1
position: 1810710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1810537-1810710:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1808286-1808375:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1800563-1801108:-1:exon

PAX3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PAX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1861966..1938890
location: region:1861966-1938890:1
so has part: feature:1861966-1938890:1:exon
subclass of: SO_0000010

103526671
type: Gene
SIO_000068: ncbigene

position:1861966:1
position: 1861966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1938890:1
position: 1938890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1861966-1938890:1:exon

PAX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PAX3
product: paired box 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 16 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030456144.1
SIO_010081: PAX3
subclass of: SO_0000673
so part of: PAX3
location: join(1861966..1862154,1863200..1863435,1864863..1864992,1865591..1865725,1914756..1914961,1925683..1925848,1926955..1927169,1937997..1938243,1938767..1938890)
location: region:1861966-1938890:1
so has part: feature:1861966-1862154:1:exon
so has part: feature:1863200-1863435:1:exon
so has part: feature:1864863-1864992:1:exon
so has part: feature:1865591-1865725:1:exon
so has part: feature:1914756-1914961:1:exon
so has part: feature:1925683-1925848:1:exon
so has part: feature:1926955-1927169:1:exon
so has part: feature:1937997-1938243:1:exon
so has part: feature:1938767-1938890:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1861966-1862154:1:exon

position:1862154:1
position: 1862154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1863200-1863435:1:exon

position:1863200:1
position: 1863200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1863435:1
position: 1863435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1864863-1864992:1:exon

position:1864863:1
position: 1864863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1864992:1
position: 1864992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1865591-1865725:1:exon

position:1865591:1
position: 1865591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1865725:1
position: 1865725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1914756-1914961:1:exon

position:1914756:1
position: 1914756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1914961:1
position: 1914961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1925683-1925848:1:exon

position:1925683:1
position: 1925683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1925848:1
position: 1925848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1926955-1927169:1:exon

position:1926955:1
position: 1926955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1927169:1
position: 1927169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1937997-1938243:1:exon

position:1937997:1
position: 1937997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1938243:1
position: 1938243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1938767-1938890:1:exon

position:1938767:1
position: 1938767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PAX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PAX3
product: paired box 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030456148.1
SIO_010081: PAX3
subclass of: SO_0000673
so part of: PAX3
location: join(1861966..1862154,1863200..1863435,1864863..1864992,1865591..1865725,1879062..1879070,1914762..1914961,1925683..1925848,1926955..1927169,1937997..1938243,1938767..1938825)
location: region:1861966-1938825:1
so has part: feature:1861966-1862154:1:exon
so has part: feature:1863200-1863435:1:exon
so has part: feature:1864863-1864992:1:exon
so has part: feature:1865591-1865725:1:exon
so has part: feature:1879062-1879070:1:exon
so has part: feature:1914762-1914961:1:exon
so has part: feature:1925683-1925848:1:exon
so has part: feature:1926955-1927169:1:exon
so has part: feature:1937997-1938243:1:exon
so has part: feature:1938767-1938825:1:exon

position:1938825:1
position: 1938825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1861966-1862154:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1863200-1863435:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1864863-1864992:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1865591-1865725:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1879062-1879070:1:exon

position:1879062:1
position: 1879062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1879070:1
position: 1879070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1914762-1914961:1:exon

position:1914762:1
position: 1914762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1925683-1925848:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1926955-1927169:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1937997-1938243:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1938767-1938825:1:exon

PAX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PAX3
product: paired box 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 13 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030456145.1
SIO_010081: PAX3
subclass of: SO_0000673
so part of: PAX3
location: join(1861966..1862154,1863200..1863435,1864863..1864992,1865591..1865725,1914762..1914961,1925683..1925848,1926955..1927169,1937997..1938243,1938767..1938825)
location: region:1861966-1938825:1
so has part: feature:1861966-1862154:1:exon
so has part: feature:1863200-1863435:1:exon
so has part: feature:1864863-1864992:1:exon
so has part: feature:1865591-1865725:1:exon
so has part: feature:1914762-1914961:1:exon
so has part: feature:1925683-1925848:1:exon
so has part: feature:1926955-1927169:1:exon
so has part: feature:1937997-1938243:1:exon
so has part: feature:1938767-1938825:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1861966-1862154:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1863200-1863435:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1864863-1864992:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1865591-1865725:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1914762-1914961:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1925683-1925848:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1926955-1927169:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1937997-1938243:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1938767-1938825:1:exon

PAX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PAX3
product: paired box 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030456147.1
SIO_010081: PAX3
subclass of: SO_0000673
so part of: PAX3
location: join(1861966..1862154,1863200..1863435,1864866..1864992,1865591..1865725,1914756..1914961,1925683..1925848,1926955..1927169,1937997..1938243,1938767..1938825)
location: region:1861966-1938825:1
so has part: feature:1861966-1862154:1:exon
so has part: feature:1863200-1863435:1:exon
so has part: feature:1864866-1864992:1:exon
so has part: feature:1865591-1865725:1:exon
so has part: feature:1914756-1914961:1:exon
so has part: feature:1925683-1925848:1:exon
so has part: feature:1926955-1927169:1:exon
so has part: feature:1937997-1938243:1:exon
so has part: feature:1938767-1938825:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1861966-1862154:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1863200-1863435:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1864866-1864992:1:exon

position:1864866:1
position: 1864866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1865591-1865725:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1914756-1914961:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1925683-1925848:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1926955-1927169:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1937997-1938243:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1938767-1938825:1:exon

PAX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PAX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paired box protein Pax-3 isoform X4
translation: MTTLAGAVPRMMRPGAGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENAGMFSWEIRDKLLKDGVCDRNTVPSVSSISRILRSKFGKGEEEEAELERKEVEEGDKKAKHSIDGILSERVPISSQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPSAMPTLPTYQLSEPSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSSLPSNPESSSAYCLPSTRHGFSSYTDSFVPPSGPSNPMNPAIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLEPTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLKPDIA
SIO_010081: PAX3
subclass of: SO_0000673
so part of: PAX3
location: join(1862070..1862154,1863200..1863435,1864863..1864992,1865591..1865725,1879062..1879070,1914762..1914961,1925683..1925848,1926955..1927169,1937997..1938243,1938767..1938801)
location: region:1862070-1938801:1
so has part: feature:1862070-1862154:1:exon
so has part: feature:1863200-1863435:1:exon
so has part: feature:1864863-1864992:1:exon
so has part: feature:1865591-1865725:1:exon
so has part: feature:1879062-1879070:1:exon
so has part: feature:1914762-1914961:1:exon
so has part: feature:1925683-1925848:1:exon
so has part: feature:1926955-1927169:1:exon
so has part: feature:1937997-1938243:1:exon
so has part: feature:1938767-1938801:1:exon

XP_030312008.1
type: Protein
SIO_000068: ncbiprotein

position:1862070:1
position: 1862070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1938801:1
position: 1938801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1862070-1862154:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1863200-1863435:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1864863-1864992:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1865591-1865725:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1879062-1879070:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1914762-1914961:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1925683-1925848:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1926955-1927169:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1937997-1938243:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1938767-1938801:1:exon

PAX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PAX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paired box protein Pax-3 isoform X1
translation: MTTLAGAVPRMMRPGAGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENAGMFSWEIRDKLLKDGVCDRNTVPSVSSISRILRSKFGKGEEEEAELERKEVEEGDKKAKHSIDGILSERASASQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPSAMPTLPTYQLSEPSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSSLPSNPESSSAYCLPSTRHGFSSYTDSFVPPSGPSNPMNPAIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLEPTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLKPDIA
SIO_010081: PAX3
subclass of: SO_0000673
so part of: PAX3
location: join(1862070..1862154,1863200..1863435,1864863..1864992,1865591..1865725,1914756..1914961,1925683..1925848,1926955..1927169,1937997..1938243,1938767..1938801)
location: region:1862070-1938801:1
so has part: feature:1862070-1862154:1:exon
so has part: feature:1863200-1863435:1:exon
so has part: feature:1864863-1864992:1:exon
so has part: feature:1865591-1865725:1:exon
so has part: feature:1914756-1914961:1:exon
so has part: feature:1925683-1925848:1:exon
so has part: feature:1926955-1927169:1:exon
so has part: feature:1937997-1938243:1:exon
so has part: feature:1938767-1938801:1:exon

XP_030312004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1862070-1862154:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1863200-1863435:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1864863-1864992:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1865591-1865725:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1914756-1914961:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1925683-1925848:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1926955-1927169:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1937997-1938243:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1938767-1938801:1:exon

PAX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PAX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paired box protein Pax-3 isoform X2
translation: MTTLAGAVPRMMRPGAGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENAGMFSWEIRDKLLKDGVCDRNTVPSVSSISRILRSKFGKGEEEEAELERKEVEEGDKKAKHSIDGILSERASQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPSAMPTLPTYQLSEPSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSSLPSNPESSSAYCLPSTRHGFSSYTDSFVPPSGPSNPMNPAIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLEPTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLKPDIA
SIO_010081: PAX3
subclass of: SO_0000673
so part of: PAX3
location: join(1862070..1862154,1863200..1863435,1864863..1864992,1865591..1865725,1914762..1914961,1925683..1925848,1926955..1927169,1937997..1938243,1938767..1938801)
location: region:1862070-1938801:1
so has part: feature:1862070-1862154:1:exon
so has part: feature:1863200-1863435:1:exon
so has part: feature:1864863-1864992:1:exon
so has part: feature:1865591-1865725:1:exon
so has part: feature:1914762-1914961:1:exon
so has part: feature:1925683-1925848:1:exon
so has part: feature:1926955-1927169:1:exon
so has part: feature:1937997-1938243:1:exon
so has part: feature:1938767-1938801:1:exon

XP_030312005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1862070-1862154:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1863200-1863435:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1864863-1864992:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1865591-1865725:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1914762-1914961:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1925683-1925848:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1926955-1927169:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1937997-1938243:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1938767-1938801:1:exon

PAX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PAX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paired box protein Pax-3 isoform X3
translation: MTTLAGAVPRMMRPGAGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENAGMFSWEIRDKLLKDGVCDRNTVPSVSSISRILRSKFGKGEEEEAELERKEVEEGDKKAKHSIDGILSERASASQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPSAMPTLPTYQLSEPSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSSLPSNPESSSAYCLPSTRHGFSSYTDSFVPPSGPSNPMNPAIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLEPTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLKPDIA
SIO_010081: PAX3
subclass of: SO_0000673
so part of: PAX3
location: join(1862070..1862154,1863200..1863435,1864866..1864992,1865591..1865725,1914756..1914961,1925683..1925848,1926955..1927169,1937997..1938243,1938767..1938801)
location: region:1862070-1938801:1
so has part: feature:1862070-1862154:1:exon
so has part: feature:1863200-1863435:1:exon
so has part: feature:1864866-1864992:1:exon
so has part: feature:1865591-1865725:1:exon
so has part: feature:1914756-1914961:1:exon
so has part: feature:1925683-1925848:1:exon
so has part: feature:1926955-1927169:1:exon
so has part: feature:1937997-1938243:1:exon
so has part: feature:1938767-1938801:1:exon

XP_030312007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1862070-1862154:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1863200-1863435:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1864866-1864992:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1865591-1865725:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1914756-1914961:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1925683-1925848:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1926955-1927169:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1937997-1938243:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1938767-1938801:1:exon

EPHA4
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: EPHA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2111200..2215688
location: region:2111200-2215688:1
so has part: feature:2111200-2215688:1:exon
subclass of: SO_0000010

103526963
type: Gene
SIO_000068: ncbigene

position:2111200:1
position: 2111200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2215688:1
position: 2215688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2111200-2215688:1:exon

EPHA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: EPHA4
product: EPH receptor A4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs, 3 long SRA reads, 46 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030456105.1
SIO_010081: EPHA4
subclass of: SO_0000673
so part of: EPHA4
location: join(2111200..2111378,2112436..2112503,2116682..2117345,2152690..2152845,2167596..2167934,2188286..2188410,2189608..2189767,2190812..2190923,2195849..2195907,2196702..2196815,2196994..2197179,2201115..2201176,2201712..2201921,2204425..2204574,2207021..2207214,2209701..2209856,2210144..2211029,2213304..2215688)
location: region:2111200-2215688:1
so has part: feature:2111200-2111378:1:exon
so has part: feature:2112436-2112503:1:exon
so has part: feature:2116682-2117345:1:exon
so has part: feature:2152690-2152845:1:exon
so has part: feature:2167596-2167934:1:exon
so has part: feature:2188286-2188410:1:exon
so has part: feature:2189608-2189767:1:exon
so has part: feature:2190812-2190923:1:exon
so has part: feature:2195849-2195907:1:exon
so has part: feature:2196702-2196815:1:exon
so has part: feature:2196994-2197179:1:exon
so has part: feature:2201115-2201176:1:exon
so has part: feature:2201712-2201921:1:exon
so has part: feature:2204425-2204574:1:exon
so has part: feature:2207021-2207214:1:exon
so has part: feature:2209701-2209856:1:exon
so has part: feature:2210144-2211029:1:exon
so has part: feature:2213304-2215688:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2111200-2111378:1:exon

position:2111378:1
position: 2111378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2112436-2112503:1:exon

position:2112436:1
position: 2112436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2112503:1
position: 2112503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2116682-2117345:1:exon

position:2116682:1
position: 2116682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2117345:1
position: 2117345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2152690-2152845:1:exon

position:2152690:1
position: 2152690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2152845:1
position: 2152845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2167596-2167934:1:exon

position:2167596:1
position: 2167596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2167934:1
position: 2167934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2188286-2188410:1:exon

position:2188286:1
position: 2188286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2188410:1
position: 2188410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2189608-2189767:1:exon

position:2189608:1
position: 2189608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2189767:1
position: 2189767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2190812-2190923:1:exon

position:2190812:1
position: 2190812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2190923:1
position: 2190923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2195849-2195907:1:exon

position:2195849:1
position: 2195849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2195907:1
position: 2195907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2196702-2196815:1:exon

position:2196702:1
position: 2196702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2196815:1
position: 2196815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2196994-2197179:1:exon

position:2196994:1
position: 2196994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2197179:1
position: 2197179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2201115-2201176:1:exon

position:2201115:1
position: 2201115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2201176:1
position: 2201176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2201712-2201921:1:exon

position:2201712:1
position: 2201712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2201921:1
position: 2201921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2204425-2204574:1:exon

position:2204425:1
position: 2204425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2204574:1
position: 2204574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2207021-2207214:1:exon

position:2207021:1
position: 2207021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2207214:1
position: 2207214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2209701-2209856:1:exon

position:2209701:1
position: 2209701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2209856:1
position: 2209856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2210144-2211029:1:exon

position:2210144:1
position: 2210144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2211029:1
position: 2211029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2213304-2215688:1:exon

position:2213304:1
position: 2213304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EPHA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: EPHA4
product: EPH receptor A4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs, 1 long SRA read, 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030456106.1
SIO_010081: EPHA4
subclass of: SO_0000673
so part of: EPHA4
location: join(2111210..2111378,2112436..2112503,2116682..2117345,2152690..2152845,2167596..2167934,2188286..2188410,2189608..2189767,2190812..2190923,2195849..2195907,2196702..2196815,2196994..2197179,2201115..2201176,2201712..2201921,2204425..2204574,2207021..2207214,2209701..2209856,2210144..2211125,2213304..2215688)
location: region:2111210-2215688:1
so has part: feature:2111210-2111378:1:exon
so has part: feature:2112436-2112503:1:exon
so has part: feature:2116682-2117345:1:exon
so has part: feature:2152690-2152845:1:exon
so has part: feature:2167596-2167934:1:exon
so has part: feature:2188286-2188410:1:exon
so has part: feature:2189608-2189767:1:exon
so has part: feature:2190812-2190923:1:exon
so has part: feature:2195849-2195907:1:exon
so has part: feature:2196702-2196815:1:exon
so has part: feature:2196994-2197179:1:exon
so has part: feature:2201115-2201176:1:exon
so has part: feature:2201712-2201921:1:exon
so has part: feature:2204425-2204574:1:exon
so has part: feature:2207021-2207214:1:exon
so has part: feature:2209701-2209856:1:exon
so has part: feature:2210144-2211125:1:exon
so has part: feature:2213304-2215688:1:exon

position:2111210:1
position: 2111210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2111210-2111378:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2112436-2112503:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2116682-2117345:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2152690-2152845:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2167596-2167934:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2188286-2188410:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2189608-2189767:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2190812-2190923:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2195849-2195907:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2196702-2196815:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2196994-2197179:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2201115-2201176:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2201712-2201921:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2204425-2204574:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2207021-2207214:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2209701-2209856:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2210144-2211125:1:exon

position:2211125:1
position: 2211125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2213304-2215688:1:exon

EPHA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: EPHA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin type-A receptor 4 isoform X1
translation: MAGVPFCALLPFLVGVCGAVTGSRVYPANEVTLLDSRSVQGELGWIASPLEGGWEEVSIMDEKNTPIRTYQVCNVMEPSQNNWLRTDWIPREGAQRVYIEIKFTLRDCNSLPGVMGTCKETFNLYYYESNNDKERFIRESQFAKIDTIAADESFTQVDIGDRIMKLNTEIRDVGPLGKKGFYLAFQDVGACIALVSVRVFYKKCPLTVRNLAQFPDTVTGADTSSLVEVRGSCVNNSEEKDVPKMYCGADGEWLVPIGNCLCNAGYEEHNGECQACKIGYYKALSTDVACAKCPPHSYSIWEGSTSCTCDRGFFRAENDAASMPCTRPPSAPQNLISNVNETSVNLEWSPPQNKGGREDISYNVVCKRCGAGDLSHCRSCGSGVHFSPQQNGLKTTKVSITDLLAHTNYTFEVWAVNGVSKQNPSQDQAVSVTVTTNQAAPSPIALIQAKEITRHSVALAWLEPDRPNGVILEYEVKYYEKDQNERSYRIVKTASRNTDIKGLNPLTSYVFHVRARTAAGYGDFSGPFEFTTNTVPSPIIGDGTNPTVLLVSVAGSVVLVVILIAAFVISRRRSKYSKAKQEADEEKHLNQGVRTYVDPFTYEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRNPNSLKRTGSESSRPSTALLDPSSPEFSAVVSVSDWLQAIKMERYKDNFTAAGYTTLEAVVHMNQDDLARIGITAIAHQNKILSSVQAMRTQMQQMHGRMVPV
SIO_010081: EPHA4
subclass of: SO_0000673
so part of: EPHA4
location: join(2111288..2111378,2112436..2112503,2116682..2117345,2152690..2152845,2167596..2167934,2188286..2188410,2189608..2189767,2190812..2190923,2195849..2195907,2196702..2196815,2196994..2197179,2201115..2201176,2201712..2201921,2204425..2204574,2207021..2207214,2209701..2209856,2210144..2210258)
location: region:2111288-2210258:1
so has part: feature:2111288-2111378:1:exon
so has part: feature:2112436-2112503:1:exon
so has part: feature:2116682-2117345:1:exon
so has part: feature:2152690-2152845:1:exon
so has part: feature:2167596-2167934:1:exon
so has part: feature:2188286-2188410:1:exon
so has part: feature:2189608-2189767:1:exon
so has part: feature:2190812-2190923:1:exon
so has part: feature:2195849-2195907:1:exon
so has part: feature:2196702-2196815:1:exon
so has part: feature:2196994-2197179:1:exon
so has part: feature:2201115-2201176:1:exon
so has part: feature:2201712-2201921:1:exon
so has part: feature:2204425-2204574:1:exon
so has part: feature:2207021-2207214:1:exon
so has part: feature:2209701-2209856:1:exon
so has part: feature:2210144-2210258:1:exon

XP_030311965.1
type: Protein
SIO_000068: ncbiprotein

position:2111288:1
position: 2111288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2210258:1
position: 2210258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2111288-2111378:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2112436-2112503:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2116682-2117345:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2152690-2152845:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2167596-2167934:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2188286-2188410:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2189608-2189767:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2190812-2190923:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2195849-2195907:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2196702-2196815:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2196994-2197179:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2201115-2201176:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2201712-2201921:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2204425-2204574:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2207021-2207214:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2209701-2209856:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2210144-2210258:1:exon

EPHA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: EPHA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin type-A receptor 4 isoform X1
translation: MAGVPFCALLPFLVGVCGAVTGSRVYPANEVTLLDSRSVQGELGWIASPLEGGWEEVSIMDEKNTPIRTYQVCNVMEPSQNNWLRTDWIPREGAQRVYIEIKFTLRDCNSLPGVMGTCKETFNLYYYESNNDKERFIRESQFAKIDTIAADESFTQVDIGDRIMKLNTEIRDVGPLGKKGFYLAFQDVGACIALVSVRVFYKKCPLTVRNLAQFPDTVTGADTSSLVEVRGSCVNNSEEKDVPKMYCGADGEWLVPIGNCLCNAGYEEHNGECQACKIGYYKALSTDVACAKCPPHSYSIWEGSTSCTCDRGFFRAENDAASMPCTRPPSAPQNLISNVNETSVNLEWSPPQNKGGREDISYNVVCKRCGAGDLSHCRSCGSGVHFSPQQNGLKTTKVSITDLLAHTNYTFEVWAVNGVSKQNPSQDQAVSVTVTTNQAAPSPIALIQAKEITRHSVALAWLEPDRPNGVILEYEVKYYEKDQNERSYRIVKTASRNTDIKGLNPLTSYVFHVRARTAAGYGDFSGPFEFTTNTVPSPIIGDGTNPTVLLVSVAGSVVLVVILIAAFVISRRRSKYSKAKQEADEEKHLNQGVRTYVDPFTYEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRNPNSLKRTGSESSRPSTALLDPSSPEFSAVVSVSDWLQAIKMERYKDNFTAAGYTTLEAVVHMNQDDLARIGITAIAHQNKILSSVQAMRTQMQQMHGRMVPV
SIO_010081: EPHA4
subclass of: SO_0000673
so part of: EPHA4
location: join(2111288..2111378,2112436..2112503,2116682..2117345,2152690..2152845,2167596..2167934,2188286..2188410,2189608..2189767,2190812..2190923,2195849..2195907,2196702..2196815,2196994..2197179,2201115..2201176,2201712..2201921,2204425..2204574,2207021..2207214,2209701..2209856,2210144..2210258)
location: region:2111288-2210258:1
so has part: feature:2111288-2111378:1:exon
so has part: feature:2112436-2112503:1:exon
so has part: feature:2116682-2117345:1:exon
so has part: feature:2152690-2152845:1:exon
so has part: feature:2167596-2167934:1:exon
so has part: feature:2188286-2188410:1:exon
so has part: feature:2189608-2189767:1:exon
so has part: feature:2190812-2190923:1:exon
so has part: feature:2195849-2195907:1:exon
so has part: feature:2196702-2196815:1:exon
so has part: feature:2196994-2197179:1:exon
so has part: feature:2201115-2201176:1:exon
so has part: feature:2201712-2201921:1:exon
so has part: feature:2204425-2204574:1:exon
so has part: feature:2207021-2207214:1:exon
so has part: feature:2209701-2209856:1:exon
so has part: feature:2210144-2210258:1:exon

XP_030311966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2111288-2111378:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2112436-2112503:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2116682-2117345:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2152690-2152845:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2167596-2167934:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2188286-2188410:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2189608-2189767:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2190812-2190923:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2195849-2195907:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2196702-2196815:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2196994-2197179:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2201115-2201176:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2201712-2201921:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2204425-2204574:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2207021-2207214:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2209701-2209856:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2210144-2210258:1:exon

EPHA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: EPHA4
product: EPH receptor A4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 long SRA read, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030456108.1
SIO_010081: EPHA4
subclass of: SO_0000673
so part of: EPHA4
location: join(2111934..2112012,2112436..2112503,2116682..2117345,2152690..2152845,2167596..2167934,2188286..2188410,2189608..2189767,2190812..2190923,2195849..2195907,2196702..2196815,2196994..2197179,2201115..2201176,2201712..2201921,2204425..2204574,2207021..2207214,2209701..2209856,2210144..2211029,2213304..2215688)
location: region:2111934-2215688:1
so has part: feature:2111934-2112012:1:exon
so has part: feature:2112436-2112503:1:exon
so has part: feature:2116682-2117345:1:exon
so has part: feature:2152690-2152845:1:exon
so has part: feature:2167596-2167934:1:exon
so has part: feature:2188286-2188410:1:exon
so has part: feature:2189608-2189767:1:exon
so has part: feature:2190812-2190923:1:exon
so has part: feature:2195849-2195907:1:exon
so has part: feature:2196702-2196815:1:exon
so has part: feature:2196994-2197179:1:exon
so has part: feature:2201115-2201176:1:exon
so has part: feature:2201712-2201921:1:exon
so has part: feature:2204425-2204574:1:exon
so has part: feature:2207021-2207214:1:exon
so has part: feature:2209701-2209856:1:exon
so has part: feature:2210144-2211029:1:exon
so has part: feature:2213304-2215688:1:exon

position:2111934:1
position: 2111934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2111934-2112012:1:exon

position:2112012:1
position: 2112012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2112436-2112503:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2116682-2117345:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2152690-2152845:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2167596-2167934:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2188286-2188410:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2189608-2189767:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2190812-2190923:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2195849-2195907:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2196702-2196815:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2196994-2197179:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2201115-2201176:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2201712-2201921:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2204425-2204574:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2207021-2207214:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2209701-2209856:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2210144-2211029:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2213304-2215688:1:exon

EPHA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: EPHA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin type-A receptor 4 isoform X2
translation: MDEKNTPIRTYQVCNVMEPSQNNWLRTDWIPREGAQRVYIEIKFTLRDCNSLPGVMGTCKETFNLYYYESNNDKERFIRESQFAKIDTIAADESFTQVDIGDRIMKLNTEIRDVGPLGKKGFYLAFQDVGACIALVSVRVFYKKCPLTVRNLAQFPDTVTGADTSSLVEVRGSCVNNSEEKDVPKMYCGADGEWLVPIGNCLCNAGYEEHNGECQACKIGYYKALSTDVACAKCPPHSYSIWEGSTSCTCDRGFFRAENDAASMPCTRPPSAPQNLISNVNETSVNLEWSPPQNKGGREDISYNVVCKRCGAGDLSHCRSCGSGVHFSPQQNGLKTTKVSITDLLAHTNYTFEVWAVNGVSKQNPSQDQAVSVTVTTNQAAPSPIALIQAKEITRHSVALAWLEPDRPNGVILEYEVKYYEKDQNERSYRIVKTASRNTDIKGLNPLTSYVFHVRARTAAGYGDFSGPFEFTTNTVPSPIIGDGTNPTVLLVSVAGSVVLVVILIAAFVISRRRSKYSKAKQEADEEKHLNQGVRTYVDPFTYEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRNPNSLKRTGSESSRPSTALLDPSSPEFSAVVSVSDWLQAIKMERYKDNFTAAGYTTLEAVVHMNQDDLARIGITAIAHQNKILSSVQAMRTQMQQMHGRMVPV
SIO_010081: EPHA4
subclass of: SO_0000673
so part of: EPHA4
location: join(2116700..2117345,2152690..2152845,2167596..2167934,2188286..2188410,2189608..2189767,2190812..2190923,2195849..2195907,2196702..2196815,2196994..2197179,2201115..2201176,2201712..2201921,2204425..2204574,2207021..2207214,2209701..2209856,2210144..2210258)
location: region:2116700-2210258:1
so has part: feature:2116700-2117345:1:exon
so has part: feature:2152690-2152845:1:exon
so has part: feature:2167596-2167934:1:exon
so has part: feature:2188286-2188410:1:exon
so has part: feature:2189608-2189767:1:exon
so has part: feature:2190812-2190923:1:exon
so has part: feature:2195849-2195907:1:exon
so has part: feature:2196702-2196815:1:exon
so has part: feature:2196994-2197179:1:exon
so has part: feature:2201115-2201176:1:exon
so has part: feature:2201712-2201921:1:exon
so has part: feature:2204425-2204574:1:exon
so has part: feature:2207021-2207214:1:exon
so has part: feature:2209701-2209856:1:exon
so has part: feature:2210144-2210258:1:exon

XP_030311968.1
type: Protein
SIO_000068: ncbiprotein

position:2116700:1
position: 2116700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2116700-2117345:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2152690-2152845:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2167596-2167934:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2188286-2188410:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2189608-2189767:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2190812-2190923:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2195849-2195907:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2196702-2196815:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2196994-2197179:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2201115-2201176:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2201712-2201921:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2204425-2204574:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2207021-2207214:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2209701-2209856:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2210144-2210258:1:exon

PXYLP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PXYLP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2950950..3011658)
location: region:2950950-3011658:-1
so has part: feature:2950950-3011658:-1:exon
subclass of: SO_0000010

103527012
type: Gene
SIO_000068: ncbigene

position:2950950:-1
position: 2950950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3011658:-1
position: 3011658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2950950-3011658:-1:exon

PXYLP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PXYLP1
product: 2-phosphoxylose phosphatase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030456599.1
SIO_010081: PXYLP1
subclass of: SO_0000673
so part of: PXYLP1
location: complement(join(2950950..2953251,2955765..2955904,2969587..2969713,2970609..2970770,2993617..2993748,3011581..3011658))
location: region:2950950-3011658:-1
so has part: feature:3011581-3011658:-1:exon
so has part: feature:2993617-2993748:-1:exon
so has part: feature:2970609-2970770:-1:exon
so has part: feature:2969587-2969713:-1:exon
so has part: feature:2955765-2955904:-1:exon
so has part: feature:2950950-2953251:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3011581-3011658:-1:exon

position:3011581:-1
position: 3011581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2993617-2993748:-1:exon

position:2993617:-1
position: 2993617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2993748:-1
position: 2993748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2970609-2970770:-1:exon

position:2970609:-1
position: 2970609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2970770:-1
position: 2970770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2969587-2969713:-1:exon

position:2969587:-1
position: 2969587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2969713:-1
position: 2969713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2955765-2955904:-1:exon

position:2955765:-1
position: 2955765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2955904:-1
position: 2955904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2950950-2953251:-1:exon

position:2953251:-1
position: 2953251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PXYLP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PXYLP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 2-phosphoxylose phosphatase 1
translation: MLFRNRFLFLLALAALLAFLSLSLQFLHLIPVNPIREDGLNPKSRKRIMPDLLTEPPATDPLYEARVYCNIPTIAERSMEGHAPHYFKLVSVQVLIRHGDRYPLYTIPKTKRPDIDCMLLPSRKPSHPQLEAFIKHMSKGSAAQMDGSLSSLPRYPSHSLCEMGELTQTGVVQHLQNGQLLREIYINKHKLLLSNWTAKQLYLETTGKSRTLQSALALLYTFLPDFDWKKINMRHQWSTIFCSGSCDCPMRNHYLEEEQRRQYSLRVKNTDLEKIYVDMAKIVGIPTRQLRASNPIDSLLCYFCHNVSFPCTKTGCMSMEHFKVIKRHQLEDERERQEKKLYFLYALLATHPLLNQTVNRLQRIAEGKKEEVFVLYSAHDVTLSPVISALGITEARFPRFAARLVFELWQDGKKPKEHFVRILYDGTDVTFQTSFCKDYYKHSNKPMCPLEKFVNFVKRDMFLVFNSTSYHDACRRRAL
SIO_010081: PXYLP1
subclass of: SO_0000673
so part of: PXYLP1
location: complement(join(2952320..2953251,2955765..2955904,2969587..2969713,2970609..2970770,2993617..2993695))
location: region:2952320-2993695:-1
so has part: feature:2993617-2993695:-1:exon
so has part: feature:2970609-2970770:-1:exon
so has part: feature:2969587-2969713:-1:exon
so has part: feature:2955765-2955904:-1:exon
so has part: feature:2952320-2953251:-1:exon

XP_030312459.1
type: Protein
SIO_000068: ncbiprotein

position:2952320:-1
position: 2952320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2993695:-1
position: 2993695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2993617-2993695:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2970609-2970770:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2969587-2969713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2955765-2955904:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2952320-2953251:-1:exon

SLC25A36
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SLC25A36
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3068627..3105097
location: region:3068627-3105097:1
so has part: feature:3068627-3105097:1:exon
subclass of: SO_0000010

103527013
type: Gene
SIO_000068: ncbigene

position:3068627:1
position: 3068627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3105097:1
position: 3105097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3068627-3105097:1:exon

SLC25A36
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SLC25A36
product: solute carrier family 25 member 36
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030456227.1
SIO_010081: SLC25A36
subclass of: SO_0000673
so part of: SLC25A36
location: join(3068627..3068803,3080558..3080728,3085557..3085634,3089656..3089756,3097084..3097150,3100951..3101240,3101962..3105097)
location: region:3068627-3105097:1
so has part: feature:3068627-3068803:1:exon
so has part: feature:3080558-3080728:1:exon
so has part: feature:3085557-3085634:1:exon
so has part: feature:3089656-3089756:1:exon
so has part: feature:3097084-3097150:1:exon
so has part: feature:3100951-3101240:1:exon
so has part: feature:3101962-3105097:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3068627-3068803:1:exon

position:3068803:1
position: 3068803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3080558-3080728:1:exon

position:3080558:1
position: 3080558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3080728:1
position: 3080728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3085557-3085634:1:exon

position:3085557:1
position: 3085557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3085634:1
position: 3085634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3089656-3089756:1:exon

position:3089656:1
position: 3089656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3089756:1
position: 3089756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3097084-3097150:1:exon

position:3097084:1
position: 3097084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3097150:1
position: 3097150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3100951-3101240:1:exon

position:3100951:1
position: 3100951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3101240:1
position: 3101240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3101962-3105097:1:exon

position:3101962:1
position: 3101962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC25A36
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SLC25A36
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 25 member 36
translation: MSQRDTLVHLFAGGCGGTVGAILTCPLEVVKTRLQSSSVTLYISEVHLNTVNGASVNRVTRVSPGPLHCLKMILQKEGPRSLFRGLGPNLVGVAPSRAIYFAAYSNCKEKLNNIFSPDSIQVHMISAGVAGFTAITTTNPIWLVKTRLQLDARNRGEKRMSAFECVQKVYRADGIKGFYRGMSASYAGISETVIHFVIYESIKRKLLEYKIASAMDNEDESAKEASDFVGMMMAAATSKTCATSIAYPHEVVRTRLREEGTKYRSFFQTLSLLVREEGYGSLYRGLTTHLIRQIPNTAIMMSTYEVVVYLLDG
SIO_010081: SLC25A36
subclass of: SO_0000673
so part of: SLC25A36
location: join(3068763..3068803,3080558..3080728,3085557..3085634,3089656..3089756,3097084..3097150,3100951..3101240,3101962..3102155)
location: region:3068763-3102155:1
so has part: feature:3068763-3068803:1:exon
so has part: feature:3080558-3080728:1:exon
so has part: feature:3085557-3085634:1:exon
so has part: feature:3089656-3089756:1:exon
so has part: feature:3097084-3097150:1:exon
so has part: feature:3100951-3101240:1:exon
so has part: feature:3101962-3102155:1:exon

XP_030312087.1
type: Protein
SIO_000068: ncbiprotein

position:3068763:1
position: 3068763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3102155:1
position: 3102155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3068763-3068803:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3080558-3080728:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3085557-3085634:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3089656-3089756:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3097084-3097150:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3100951-3101240:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3101962-3102155:1:exon

GPC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: GPC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3111373..3320729)
location: region:3111373-3320729:-1
so has part: feature:3111373-3320729:-1:exon
subclass of: SO_0000010

103531227
type: Gene
SIO_000068: ncbigene

position:3111373:-1
position: 3111373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3320729:-1
position: 3320729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3111373-3320729:-1:exon

GPC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: GPC1
product: glypican 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 1 EST, 1 long SRA read, 15 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030456303.1
SIO_010081: GPC1
subclass of: SO_0000673
so part of: GPC1
location: complement(join(3111373..3111552,3111700..3111819,3114958..3115088,3119104..3119269,3135885..3136276,3215090..3215248,3320137..3320729))
location: region:3111373-3320729:-1
so has part: feature:3320137-3320729:-1:exon
so has part: feature:3215090-3215248:-1:exon
so has part: feature:3135885-3136276:-1:exon
so has part: feature:3119104-3119269:-1:exon
so has part: feature:3114958-3115088:-1:exon
so has part: feature:3111700-3111819:-1:exon
so has part: feature:3111373-3111552:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3320137-3320729:-1:exon

position:3320137:-1
position: 3320137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3215090-3215248:-1:exon

position:3215090:-1
position: 3215090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3215248:-1
position: 3215248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3135885-3136276:-1:exon

position:3135885:-1
position: 3135885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3136276:-1
position: 3136276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3119104-3119269:-1:exon

position:3119104:-1
position: 3119104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3119269:-1
position: 3119269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3114958-3115088:-1:exon

position:3114958:-1
position: 3114958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3115088:-1
position: 3115088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3111700-3111819:-1:exon

position:3111700:-1
position: 3111700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3111819:-1
position: 3111819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3111373-3111552:-1:exon

position:3111552:-1
position: 3111552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: GPC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glypican-1
translation: MRFFPWGFWLLCVASAPVRGDSGSKARSCAEVRQLYGAKGFSLSGVPQAEISGEHLRICPQGYTCCTSEMEENFANKSRSEFEAMMKEAGRSVQTTLTAQHRSFDSYFQDLLNKSEKALYDAFPSMYGELYTQNMKVFKDLYSELRRYYRGSNINLEEALNEFWTRLLERLFKQMNPQYHITDEYLDCMVKHAEQHKPFGEVPRELKVKATRAFIAARSYAQGFLVGSDVVRKVSQVSLSQECTRAIMKLMYCPHCRGMASVKPCNNYCLNVVKGCLANQADLNTEWKYLMDSLMVVADRIDGPYNVDTVIGTIHMRISEAISNLQENKDSVTAKVFQGCGNPKISTKGSSSEDKKRRGKVTLEAKSSAQALEMLVLDAKGNLTALKTYWITLPSSLCSKKVMASSGMDDKCWNGMTKGRYGWRGSGCLESTLW
SIO_010081: GPC1
subclass of: SO_0000673
so part of: GPC1
location: complement(join(3111373..3111552,3111700..3111819,3114958..3115088,3119104..3119269,3135885..3136276,3215090..3215248,3320137..3320293))
location: region:3111373-3320293:-1
so has part: feature:3320137-3320293:-1:exon
so has part: feature:3215090-3215248:-1:exon
so has part: feature:3135885-3136276:-1:exon
so has part: feature:3119104-3119269:-1:exon
so has part: feature:3114958-3115088:-1:exon
so has part: feature:3111700-3111819:-1:exon
so has part: feature:3111373-3111552:-1:exon

XP_030312163.1
type: Protein
SIO_000068: ncbiprotein

position:3320293:-1
position: 3320293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3320137-3320293:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3215090-3215248:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3135885-3136276:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3119104-3119269:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3114958-3115088:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3111700-3111819:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3111373-3111552:-1:exon

LOC103531226
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103531226
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3440501..3824165)
location: region:3440501-3824165:-1
so has part: feature:3440501-3824165:-1:exon
subclass of: SO_0000010

103531226
type: Gene
SIO_000068: ncbigene

position:3440501:-1
position: 3440501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3824165:-1
position: 3824165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3440501-3824165:-1:exon

LOC103531226
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103531226
product: glypican-5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030456592.1
SIO_010081: LOC103531226
subclass of: SO_0000673
so part of: LOC103531226
location: complement(join(3440501..3441077,3526623..3526773,3578894..3579014,3652687..3652812,3654637..3654696,3658994..3659124,3693855..3694549,3750291..3750452,3824069..3824165))
location: region:3440501-3824165:-1
so has part: feature:3824069-3824165:-1:exon
so has part: feature:3750291-3750452:-1:exon
so has part: feature:3693855-3694549:-1:exon
so has part: feature:3658994-3659124:-1:exon
so has part: feature:3654637-3654696:-1:exon
so has part: feature:3652687-3652812:-1:exon
so has part: feature:3578894-3579014:-1:exon
so has part: feature:3526623-3526773:-1:exon
so has part: feature:3440501-3441077:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3824069-3824165:-1:exon

position:3824069:-1
position: 3824069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3750291-3750452:-1:exon

position:3750291:-1
position: 3750291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3750452:-1
position: 3750452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3693855-3694549:-1:exon

position:3693855:-1
position: 3693855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3694549:-1
position: 3694549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3658994-3659124:-1:exon

position:3658994:-1
position: 3658994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3659124:-1
position: 3659124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3654637-3654696:-1:exon

position:3654637:-1
position: 3654637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3654696:-1
position: 3654696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3652687-3652812:-1:exon

position:3652687:-1
position: 3652687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3652812:-1
position: 3652812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3578894-3579014:-1:exon

position:3578894:-1
position: 3578894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3579014:-1
position: 3579014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3526623-3526773:-1:exon

position:3526623:-1
position: 3526623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3526773:-1
position: 3526773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3440501-3441077:-1:exon

position:3441077:-1
position: 3441077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103531226
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103531226
product: glypican-5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030456593.1
SIO_010081: LOC103531226
subclass of: SO_0000673
so part of: LOC103531226
location: complement(join(3440501..3441077,3526623..3526773,3578894..3579014,3652687..3652812,3654637..3654696,3658994..3659124,3693855..3694549,3750291..3750452,3776185..3776263))
location: region:3440501-3776263:-1
so has part: feature:3776185-3776263:-1:exon
so has part: feature:3750291-3750452:-1:exon
so has part: feature:3693855-3694549:-1:exon
so has part: feature:3658994-3659124:-1:exon
so has part: feature:3654637-3654696:-1:exon
so has part: feature:3652687-3652812:-1:exon
so has part: feature:3578894-3579014:-1:exon
so has part: feature:3526623-3526773:-1:exon
so has part: feature:3440501-3441077:-1:exon

position:3776263:-1
position: 3776263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3776185-3776263:-1:exon

position:3776185:-1
position: 3776185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3750291-3750452:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3693855-3694549:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3658994-3659124:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3654637-3654696:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3652687-3652812:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3578894-3579014:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3526623-3526773:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3440501-3441077:-1:exon

LOC103531226
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103531226
product: glypican-5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030456594.1
SIO_010081: LOC103531226
subclass of: SO_0000673
so part of: LOC103531226
location: complement(join(3440501..3441077,3526623..3526773,3578894..3579014,3652687..3652812,3654637..3654696,3658994..3659124,3693855..3694549,3750291..3750452,3774369..3774511))
location: region:3440501-3774511:-1
so has part: feature:3774369-3774511:-1:exon
so has part: feature:3750291-3750452:-1:exon
so has part: feature:3693855-3694549:-1:exon
so has part: feature:3658994-3659124:-1:exon
so has part: feature:3654637-3654696:-1:exon
so has part: feature:3652687-3652812:-1:exon
so has part: feature:3578894-3579014:-1:exon
so has part: feature:3526623-3526773:-1:exon
so has part: feature:3440501-3441077:-1:exon

position:3774511:-1
position: 3774511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3774369-3774511:-1:exon

position:3774369:-1
position: 3774369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3750291-3750452:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3693855-3694549:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3658994-3659124:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3654637-3654696:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3652687-3652812:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3578894-3579014:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3526623-3526773:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3440501-3441077:-1:exon

LOC103531226
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103531226
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glypican-5
translation: MEESYQAAVRRERTQSIQALNFELKYMIVGHITAFQEAFETSLRFAENHTSSLFETAYRAMAKEAAEPVKELFTDLSLYILGAETTVESAVLRFFDSLFPLVYSRLINPGITDLSEDYTECLRLTRQDINPFGHYSKNMVTELSKSLWASRMLSQALSLGIEVINTTEHAALTKECSRALVKMQYCPHCQGLTLIRPCVGYCLNVMRGCLASVSELDAQWREYISTLEYLTNEMAASHDLEIALMGIRNSINEAILHAQLNGPQLSATVDKVCGQPKQEEGNLSSDNVVSVKEVTETQRFVMAHTSLNNKRSSLPLKASKNDKSRSLKKISREFISYMKRSRTFYASIAERLCDGDLVMRDSSTCWNGEDVVESYTSRVVSNGLKAQINNPELKVRGLDPLISNLIDKLQHFNQLDAEKAKLKLEKWGSQDAGSGGGRSEELESSGDCDDEDGCQGSGDRSHTADILKDKKTHPENRNEPNPTVKKIDTTTTTSTVKSSSKHSVTGNGSNPVPSSSFVIVTALAVLWHCPL
SIO_010081: LOC103531226
subclass of: SO_0000673
so part of: LOC103531226
location: complement(join(3440875..3441077,3526623..3526773,3578894..3579014,3652687..3652812,3654637..3654696,3658994..3659124,3693855..3694549,3750291..3750399))
location: region:3440875-3750399:-1
so has part: feature:3750291-3750399:-1:exon
so has part: feature:3693855-3694549:-1:exon
so has part: feature:3658994-3659124:-1:exon
so has part: feature:3654637-3654696:-1:exon
so has part: feature:3652687-3652812:-1:exon
so has part: feature:3578894-3579014:-1:exon
so has part: feature:3526623-3526773:-1:exon
so has part: feature:3440875-3441077:-1:exon

XP_030312452.1
type: Protein
SIO_000068: ncbiprotein

position:3440875:-1
position: 3440875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3750399:-1
position: 3750399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3750291-3750399:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3693855-3694549:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3658994-3659124:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3654637-3654696:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3652687-3652812:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3578894-3579014:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3526623-3526773:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3440875-3441077:-1:exon

LOC103531226
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103531226
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glypican-5
translation: MEESYQAAVRRERTQSIQALNFELKYMIVGHITAFQEAFETSLRFAENHTSSLFETAYRAMAKEAAEPVKELFTDLSLYILGAETTVESAVLRFFDSLFPLVYSRLINPGITDLSEDYTECLRLTRQDINPFGHYSKNMVTELSKSLWASRMLSQALSLGIEVINTTEHAALTKECSRALVKMQYCPHCQGLTLIRPCVGYCLNVMRGCLASVSELDAQWREYISTLEYLTNEMAASHDLEIALMGIRNSINEAILHAQLNGPQLSATVDKVCGQPKQEEGNLSSDNVVSVKEVTETQRFVMAHTSLNNKRSSLPLKASKNDKSRSLKKISREFISYMKRSRTFYASIAERLCDGDLVMRDSSTCWNGEDVVESYTSRVVSNGLKAQINNPELKVRGLDPLISNLIDKLQHFNQLDAEKAKLKLEKWGSQDAGSGGGRSEELESSGDCDDEDGCQGSGDRSHTADILKDKKTHPENRNEPNPTVKKIDTTTTTSTVKSSSKHSVTGNGSNPVPSSSFVIVTALAVLWHCPL
SIO_010081: LOC103531226
subclass of: SO_0000673
so part of: LOC103531226
location: complement(join(3440875..3441077,3526623..3526773,3578894..3579014,3652687..3652812,3654637..3654696,3658994..3659124,3693855..3694549,3750291..3750399))
location: region:3440875-3750399:-1
so has part: feature:3750291-3750399:-1:exon
so has part: feature:3693855-3694549:-1:exon
so has part: feature:3658994-3659124:-1:exon
so has part: feature:3654637-3654696:-1:exon
so has part: feature:3652687-3652812:-1:exon
so has part: feature:3578894-3579014:-1:exon
so has part: feature:3526623-3526773:-1:exon
so has part: feature:3440875-3441077:-1:exon

XP_030312453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3750291-3750399:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3693855-3694549:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3658994-3659124:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3654637-3654696:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3652687-3652812:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3578894-3579014:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3526623-3526773:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3440875-3441077:-1:exon

LOC103531226
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103531226
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glypican-5
translation: MEESYQAAVRRERTQSIQALNFELKYMIVGHITAFQEAFETSLRFAENHTSSLFETAYRAMAKEAAEPVKELFTDLSLYILGAETTVESAVLRFFDSLFPLVYSRLINPGITDLSEDYTECLRLTRQDINPFGHYSKNMVTELSKSLWASRMLSQALSLGIEVINTTEHAALTKECSRALVKMQYCPHCQGLTLIRPCVGYCLNVMRGCLASVSELDAQWREYISTLEYLTNEMAASHDLEIALMGIRNSINEAILHAQLNGPQLSATVDKVCGQPKQEEGNLSSDNVVSVKEVTETQRFVMAHTSLNNKRSSLPLKASKNDKSRSLKKISREFISYMKRSRTFYASIAERLCDGDLVMRDSSTCWNGEDVVESYTSRVVSNGLKAQINNPELKVRGLDPLISNLIDKLQHFNQLDAEKAKLKLEKWGSQDAGSGGGRSEELESSGDCDDEDGCQGSGDRSHTADILKDKKTHPENRNEPNPTVKKIDTTTTTSTVKSSSKHSVTGNGSNPVPSSSFVIVTALAVLWHCPL
SIO_010081: LOC103531226
subclass of: SO_0000673
so part of: LOC103531226
location: complement(join(3440875..3441077,3526623..3526773,3578894..3579014,3652687..3652812,3654637..3654696,3658994..3659124,3693855..3694549,3750291..3750399))
location: region:3440875-3750399:-1
so has part: feature:3750291-3750399:-1:exon
so has part: feature:3693855-3694549:-1:exon
so has part: feature:3658994-3659124:-1:exon
so has part: feature:3654637-3654696:-1:exon
so has part: feature:3652687-3652812:-1:exon
so has part: feature:3578894-3579014:-1:exon
so has part: feature:3526623-3526773:-1:exon
so has part: feature:3440875-3441077:-1:exon

XP_030312454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3750291-3750399:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3693855-3694549:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3658994-3659124:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3654637-3654696:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3652687-3652812:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3578894-3579014:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3526623-3526773:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3440875-3441077:-1:exon

LOC103531225
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103531225
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3838732..3840318
location: region:3838732-3840318:1
so has part: feature:3838732-3840318:1:exon
subclass of: SO_0000010

103531225
type: Gene
SIO_000068: ncbigene

position:3838732:1
position: 3838732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3840318:1
position: 3840318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3838732-3840318:1:exon

LOC103531225
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103531225
product: dual specificity phosphatase 28
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_008496853.2
SIO_010081: LOC103531225
subclass of: SO_0000673
so part of: LOC103531225
location: join(3838732..3839243,3840100..3840318)
location: region:3838732-3840318:1
so has part: feature:3838732-3839243:1:exon
so has part: feature:3840100-3840318:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3838732-3839243:1:exon

position:3839243:1
position: 3839243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3840100-3840318:1:exon

position:3840100:1
position: 3840100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC103531225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103531225
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity phosphatase 28
translation: MLQLCKVTPSLLISSARAACDKELLTQEGVTFCINVTRQQPFPELQRVRGIRVPVFDDPAEDLYQYFEQCSDAIEEAVKSGGKCLVYCKNGRSRSAAICTAYLMRHRKLPLKDAFETVKTARPVVEPNAGFWSQLQRYEEDLKIPKQPDLLSKGLKTSNV
SIO_010081: LOC103531225
subclass of: SO_0000673
so part of: LOC103531225
location: join(3838896..3839243,3840100..3840234)
location: region:3838896-3840234:1
so has part: feature:3838896-3839243:1:exon
so has part: feature:3840100-3840234:1:exon

XP_008495075.1
type: Protein
SIO_000068: ncbiprotein

position:3838896:1
position: 3838896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3840234:1
position: 3840234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3838896-3839243:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3840100-3840234:1:exon

LOC103537742
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103537742
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3840461..3856024)
location: region:3840461-3856024:-1
so has part: feature:3840461-3856024:-1:exon
subclass of: SO_0000010

103537742
type: Gene
SIO_000068: ncbigene

position:3840461:-1
position: 3840461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3856024:-1
position: 3856024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3840461-3856024:-1:exon

LOC103537742
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103537742
product: claudin-15, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030456200.1
SIO_010081: LOC103537742
subclass of: SO_0000673
so part of: LOC103537742
location: complement(join(3840461..3842356,3843679..3843789,3846705..3846786,3846943..3847107,3853844..3854119,3855811..3856024))
location: region:3840461-3856024:-1
so has part: feature:3855811-3856024:-1:exon
so has part: feature:3853844-3854119:-1:exon
so has part: feature:3846943-3847107:-1:exon
so has part: feature:3846705-3846786:-1:exon
so has part: feature:3843679-3843789:-1:exon
so has part: feature:3840461-3842356:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3855811-3856024:-1:exon

position:3855811:-1
position: 3855811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3853844-3854119:-1:exon

position:3853844:-1
position: 3853844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3854119:-1
position: 3854119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3846943-3847107:-1:exon

position:3846943:-1
position: 3846943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3847107:-1
position: 3847107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3846705-3846786:-1:exon

position:3846705:-1
position: 3846705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3846786:-1
position: 3846786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3843679-3843789:-1:exon

position:3843679:-1
position: 3843679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3843789:-1
position: 3843789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3840461-3842356:-1:exon

position:3842356:-1
position: 3842356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103537742
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103537742
product: claudin-15, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030456199.1
SIO_010081: LOC103537742
subclass of: SO_0000673
so part of: LOC103537742
location: complement(join(3840461..3842356,3843679..3843789,3846705..3846786,3846943..3847107,3853844..3854119,3854514..3854588))
location: region:3840461-3854588:-1
so has part: feature:3854514-3854588:-1:exon
so has part: feature:3853844-3854119:-1:exon
so has part: feature:3846943-3847107:-1:exon
so has part: feature:3846705-3846786:-1:exon
so has part: feature:3843679-3843789:-1:exon
so has part: feature:3840461-3842356:-1:exon

position:3854588:-1
position: 3854588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3854514-3854588:-1:exon

position:3854514:-1
position: 3854514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3853844-3854119:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3846943-3847107:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3846705-3846786:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3843679-3843789:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3840461-3842356:-1:exon

LOC103537742
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103537742
product: claudin-15, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030456201.1
SIO_010081: LOC103537742
subclass of: SO_0000673
so part of: LOC103537742
location: complement(join(3840461..3842356,3843679..3843789,3846705..3846786,3846943..3847107,3850909..3851178))
location: region:3840461-3851178:-1
so has part: feature:3850909-3851178:-1:exon
so has part: feature:3846943-3847107:-1:exon
so has part: feature:3846705-3846786:-1:exon
so has part: feature:3843679-3843789:-1:exon
so has part: feature:3840461-3842356:-1:exon

position:3851178:-1
position: 3851178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3850909-3851178:-1:exon

position:3850909:-1
position: 3850909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3846943-3847107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3846705-3846786:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3843679-3843789:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3840461-3842356:-1:exon

LOC103537742
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103537742
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: claudin-15 isoform X1
translation: MVSSSLQICGLLLALAGFSISLVATISSRWKVSGTTTVLVSADWISEGLWMDCAVTDLGLIQCKKFLYMLSSDTHVQACRALMITSILLGFLATVLSVLGLKCTSFGLSSEDSKAKFAVTGGFLFILGGLCSMVAVSWYAAMVTAQFFDQLYPGTKYELGDALYLGWGGSLLYILGGIFLTCSCKGKKRDHYSTKYAYSSGQAAPQQLIYTKKSETISNKEYV
SIO_010081: LOC103537742
subclass of: SO_0000673
so part of: LOC103537742
location: complement(join(3842263..3842356,3843679..3843789,3846705..3846786,3846943..3847107,3853844..3854063))
location: region:3842263-3854063:-1
so has part: feature:3853844-3854063:-1:exon
so has part: feature:3846943-3847107:-1:exon
so has part: feature:3846705-3846786:-1:exon
so has part: feature:3843679-3843789:-1:exon
so has part: feature:3842263-3842356:-1:exon

XP_030312059.1
type: Protein
SIO_000068: ncbiprotein

position:3842263:-1
position: 3842263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3854063:-1
position: 3854063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3853844-3854063:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3846943-3847107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3846705-3846786:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3843679-3843789:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3842263-3842356:-1:exon

LOC103537742
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103537742
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: claudin-15 isoform X1
translation: MVSSSLQICGLLLALAGFSISLVATISSRWKVSGTTTVLVSADWISEGLWMDCAVTDLGLIQCKKFLYMLSSDTHVQACRALMITSILLGFLATVLSVLGLKCTSFGLSSEDSKAKFAVTGGFLFILGGLCSMVAVSWYAAMVTAQFFDQLYPGTKYELGDALYLGWGGSLLYILGGIFLTCSCKGKKRDHYSTKYAYSSGQAAPQQLIYTKKSETISNKEYV
SIO_010081: LOC103537742
subclass of: SO_0000673
so part of: LOC103537742
location: complement(join(3842263..3842356,3843679..3843789,3846705..3846786,3846943..3847107,3853844..3854063))
location: region:3842263-3854063:-1
so has part: feature:3853844-3854063:-1:exon
so has part: feature:3846943-3847107:-1:exon
so has part: feature:3846705-3846786:-1:exon
so has part: feature:3843679-3843789:-1:exon
so has part: feature:3842263-3842356:-1:exon

XP_030312060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3853844-3854063:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3846943-3847107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3846705-3846786:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3843679-3843789:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3842263-3842356:-1:exon

LOC103537742
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103537742
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: claudin-15 isoform X2
translation: MSAALEIIGIILCLGGWAIIGATLPHNYWKVSTIAGSVITTSTLYENLWKSCAEDSTGVTNCRVFDSMLSLPAHVQACRALMITSILLGFLATVLSVLGLKCTSFGLSSEDSKAKFAVTGGFLFILGGLCSMVAVSWYAAMVTAQFFDQLYPGTKYELGDALYLGWGGSLLYILGGIFLTCSCKGKKRDHYSTKYAYSSGQAAPQQLIYTKKSETISNKEYV
SIO_010081: LOC103537742
subclass of: SO_0000673
so part of: LOC103537742
location: complement(join(3842263..3842356,3843679..3843789,3846705..3846786,3846943..3847107,3850909..3851125))
location: region:3842263-3851125:-1
so has part: feature:3850909-3851125:-1:exon
so has part: feature:3846943-3847107:-1:exon
so has part: feature:3846705-3846786:-1:exon
so has part: feature:3843679-3843789:-1:exon
so has part: feature:3842263-3842356:-1:exon

XP_030312061.1
type: Protein
SIO_000068: ncbiprotein

position:3851125:-1
position: 3851125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3850909-3851125:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3846943-3847107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3846705-3846786:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3843679-3843789:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3842263-3842356:-1:exon

PARL
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PARL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3858875..3871147
location: region:3858875-3871147:1
so has part: feature:3858875-3871147:1:exon
subclass of: SO_0000010

103531222
type: Gene
SIO_000068: ncbigene

position:3858875:1
position: 3858875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3871147:1
position: 3871147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3858875-3871147:1:exon

PARL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PARL
product: presenilin associated rhomboid like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 18 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_030456418.1
SIO_010081: PARL
subclass of: SO_0000673
so part of: PARL
location: join(3858875..3858959,3859043..3859247,3859656..3859796,3862165..3862213,3864013..3864108,3864671..3864820,3865282..3865352,3866667..3866768,3868230..3868327,3870822..3871147)
location: region:3858875-3871147:1
so has part: feature:3858875-3858959:1:exon
so has part: feature:3859043-3859247:1:exon
so has part: feature:3859656-3859796:1:exon
so has part: feature:3862165-3862213:1:exon
so has part: feature:3864013-3864108:1:exon
so has part: feature:3864671-3864820:1:exon
so has part: feature:3865282-3865352:1:exon
so has part: feature:3866667-3866768:1:exon
so has part: feature:3868230-3868327:1:exon
so has part: feature:3870822-3871147:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3858875-3858959:1:exon

position:3858959:1
position: 3858959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3859043-3859247:1:exon

position:3859043:1
position: 3859043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3859247:1
position: 3859247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3859656-3859796:1:exon

position:3859656:1
position: 3859656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3859796:1
position: 3859796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3862165-3862213:1:exon

position:3862165:1
position: 3862165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3862213:1
position: 3862213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3864013-3864108:1:exon

position:3864013:1
position: 3864013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3864108:1
position: 3864108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3864671-3864820:1:exon

position:3864671:1
position: 3864671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3864820:1
position: 3864820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3865282-3865352:1:exon

position:3865282:1
position: 3865282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3865352:1
position: 3865352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3866667-3866768:1:exon

position:3866667:1
position: 3866667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3866768:1
position: 3866768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3868230-3868327:1:exon

position:3868230:1
position: 3868230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3868327:1
position: 3868327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3870822-3871147:1:exon

position:3870822:1
position: 3870822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PARL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PARL
product: presenilin associated rhomboid like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 7 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030456419.1
SIO_010081: PARL
subclass of: SO_0000673
so part of: PARL
location: join(3858875..3858959,3859043..3859247,3862165..3862213,3864013..3864108,3864671..3864820,3865282..3865352,3866667..3866768,3868230..3868327,3870822..3871144)
location: region:3858875-3871144:1
so has part: feature:3858875-3858959:1:exon
so has part: feature:3859043-3859247:1:exon
so has part: feature:3862165-3862213:1:exon
so has part: feature:3864013-3864108:1:exon
so has part: feature:3864671-3864820:1:exon
so has part: feature:3865282-3865352:1:exon
so has part: feature:3866667-3866768:1:exon
so has part: feature:3868230-3868327:1:exon
so has part: feature:3870822-3871144:1:exon

position:3871144:1
position: 3871144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3858875-3858959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3859043-3859247:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3862165-3862213:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3864013-3864108:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3864671-3864820:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3865282-3865352:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3866667-3866768:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3868230-3868327:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3870822-3871144:1:exon

PARL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PARL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: presenilins-associated rhomboid-like protein, mitochondrial isoform X1
translation: MAWWCWARAGAPRTRRLPVLLEQRQGFRRARPPPAESPAGAAEARPVPQPHRRRSLFPPPPQPPPHTGRPSPQRLVKPLIFAVGFTGSAFGSAAIWQYESLKSRVQTYFEEARADWLDKIRPQKRGDFRKQINSWWNSLTEGQRTVTGIIAANVFVFCLWRLPGMRRVMFTYFTSNPSSKAVCSPMLLSTFSHFSLFHMAANMYVLWSFSSSIVSLLGCEQFIAVYLSAGVISTFVSYVAKMATGRFEPSLGASGAIMTVLAAVCTKIPEAKLAIIFLPMVTFTAGSALKAIIAFDTAGLALGWRLFDHAAHLGGALFGMWYVTYGHELIWKNREPLVKAWHEMRTKNTGKGGGGRFS
SIO_010081: PARL
subclass of: SO_0000673
so part of: PARL
location: join(3858913..3858959,3859043..3859247,3859656..3859796,3862165..3862213,3864013..3864108,3864671..3864820,3865282..3865352,3866667..3866768,3868230..3868327,3870822..3870939)
location: region:3858913-3870939:1
so has part: feature:3858913-3858959:1:exon
so has part: feature:3859043-3859247:1:exon
so has part: feature:3859656-3859796:1:exon
so has part: feature:3862165-3862213:1:exon
so has part: feature:3864013-3864108:1:exon
so has part: feature:3864671-3864820:1:exon
so has part: feature:3865282-3865352:1:exon
so has part: feature:3866667-3866768:1:exon
so has part: feature:3868230-3868327:1:exon
so has part: feature:3870822-3870939:1:exon

XP_030312278.1
type: Protein
SIO_000068: ncbiprotein

position:3858913:1
position: 3858913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3870939:1
position: 3870939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3858913-3858959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3859043-3859247:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3859656-3859796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3862165-3862213:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3864013-3864108:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3864671-3864820:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3865282-3865352:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3866667-3866768:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3868230-3868327:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3870822-3870939:1:exon

PARL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PARL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: presenilins-associated rhomboid-like protein, mitochondrial isoform X2
translation: MAWWCWARAGAPRTRRLPVLLEQRQGFRRARPPPAESPAGAAEARPVPQPHRRRSLFPPPPQPPPHTGRPSPQRLVKPLIFAVGINSWWNSLTEGQRTVTGIIAANVFVFCLWRLPGMRRVMFTYFTSNPSSKAVCSPMLLSTFSHFSLFHMAANMYVLWSFSSSIVSLLGCEQFIAVYLSAGVISTFVSYVAKMATGRFEPSLGASGAIMTVLAAVCTKIPEAKLAIIFLPMVTFTAGSALKAIIAFDTAGLALGWRLFDHAAHLGGALFGMWYVTYGHELIWKNREPLVKAWHEMRTKNTGKGGGGRFS
SIO_010081: PARL
subclass of: SO_0000673
so part of: PARL
location: join(3858913..3858959,3859043..3859247,3862165..3862213,3864013..3864108,3864671..3864820,3865282..3865352,3866667..3866768,3868230..3868327,3870822..3870939)
location: region:3858913-3870939:1
so has part: feature:3858913-3858959:1:exon
so has part: feature:3859043-3859247:1:exon
so has part: feature:3862165-3862213:1:exon
so has part: feature:3864013-3864108:1:exon
so has part: feature:3864671-3864820:1:exon
so has part: feature:3865282-3865352:1:exon
so has part: feature:3866667-3866768:1:exon
so has part: feature:3868230-3868327:1:exon
so has part: feature:3870822-3870939:1:exon

XP_030312279.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3858913-3858959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3859043-3859247:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3862165-3862213:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3864013-3864108:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3864671-3864820:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3865282-3865352:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3866667-3866768:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3868230-3868327:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3870822-3870939:1:exon

MAP6D1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: MAP6D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3876328..3889692
location: region:3876328-3889692:1
so has part: feature:3876328-3889692:1:exon
subclass of: SO_0000010

115598773
type: Gene
SIO_000068: ncbigene

position:3876328:1
position: 3876328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3889692:1
position: 3889692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3876328-3889692:1:exon

MAP6D1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MAP6D1
product: MAP6 domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_030456420.1
SIO_010081: MAP6D1
subclass of: SO_0000673
so part of: MAP6D1
location: join(3876328..3876833,3886335..3886452,3889615..3889692)
location: region:3876328-3889692:1
so has part: feature:3876328-3876833:1:exon
so has part: feature:3886335-3886452:1:exon
so has part: feature:3889615-3889692:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3876328-3876833:1:exon

position:3876833:1
position: 3876833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3886335-3886452:1:exon

position:3886335:1
position: 3886335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3886452:1
position: 3886452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3889615-3889692:1:exon

position:3889615:1
position: 3889615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAP6D1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MAP6D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAP6 domain-containing protein 1
translation: MAWPCISRVCCLARFWSQLDKSDLSVPLTIHNYSDIEEQEDGTPRRGGAPPRGSTRPPAPAPRPSYPAAGKPSGRRKDRAVATGEPFSAETQYRRDFKAWPLPRRDVFPWVSASSAGGGGSGRDGAAPHPAPGRAACALPGSVGRPAGDGPEQLRPRSQADGGHTTSYRQEYRPWTGAKPSKPIKIKQGFIIPEDHFVQETSYKADFKIPEVKTRFSPNPSAVFQAPSRILNV
SIO_010081: MAP6D1
subclass of: SO_0000673
so part of: MAP6D1
location: join(3876328..3876833,3886335..3886452,3889615..3889692)
location: region:3876328-3889692:1
so has part: feature:3876328-3876833:1:exon
so has part: feature:3886335-3886452:1:exon
so has part: feature:3889615-3889692:1:exon

XP_030312280.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3876328-3876833:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3886335-3886452:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3889615-3889692:1:exon

BOK
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: BOK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4195947..4230244)
location: region:4195947-4230244:-1
so has part: feature:4195947-4230244:-1:exon
subclass of: SO_0000010

103534844
type: Gene
SIO_000068: ncbigene

position:4195947:-1
position: 4195947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4230244:-1
position: 4230244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4195947-4230244:-1:exon

BOK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: BOK
product: BCL2 family apoptosis regulator BOK, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_008500839.2
SIO_010081: BOK
subclass of: SO_0000673
so part of: BOK
location: complement(join(4195947..4197032,4201830..4201993,4209055..4209183,4214173..4214552,4229628..4230244))
location: region:4195947-4230244:-1
so has part: feature:4229628-4230244:-1:exon
so has part: feature:4214173-4214552:-1:exon
so has part: feature:4209055-4209183:-1:exon
so has part: feature:4201830-4201993:-1:exon
so has part: feature:4195947-4197032:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4229628-4230244:-1:exon

position:4229628:-1
position: 4229628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4214173-4214552:-1:exon

position:4214173:-1
position: 4214173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4214552:-1
position: 4214552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4209055-4209183:-1:exon

position:4209055:-1
position: 4209055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4209183:-1
position: 4209183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4201830-4201993:-1:exon

position:4201830:-1
position: 4201830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4201993:-1
position: 4201993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4195947-4197032:-1:exon

position:4197032:-1
position: 4197032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BOK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: BOK
product: BCL2 family apoptosis regulator BOK, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 long SRA reads, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030455971.1
SIO_010081: BOK
subclass of: SO_0000673
so part of: BOK
location: complement(join(4195947..4197032,4201830..4201993,4209055..4209183,4214173..4214552,4215431..4215651))
location: region:4195947-4215651:-1
so has part: feature:4215431-4215651:-1:exon
so has part: feature:4214173-4214552:-1:exon
so has part: feature:4209055-4209183:-1:exon
so has part: feature:4201830-4201993:-1:exon
so has part: feature:4195947-4197032:-1:exon

position:4215651:-1
position: 4215651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4215431-4215651:-1:exon

position:4215431:-1
position: 4215431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4214173-4214552:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4209055-4209183:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4201830-4201993:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4195947-4197032:-1:exon

BOK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: BOK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bcl-2-related ovarian killer protein
translation: MEVLRRSSVFAAEVMEVFDRSPTDKELVSQAKALCRDYINSRLIRAGVSWSKPEHSAPVPGGKLAEVSTILLRLGDELEYIRPHVYRNIARQLNISLHSETLLTDAFLAVAAQIFTAGITWGKVVSLYAVAAGLAVDCVRQAQPAMVHTIVDCLGEFVRKTLVTWLKRRGGWADITKCVVNTDPSLRSHWLVAAVCSFGHFLKALFFVLLPER
SIO_010081: BOK
subclass of: SO_0000673
so part of: BOK
location: complement(join(4196907..4197032,4201830..4201993,4209055..4209183,4214173..4214395))
location: region:4196907-4214395:-1
so has part: feature:4214173-4214395:-1:exon
so has part: feature:4209055-4209183:-1:exon
so has part: feature:4201830-4201993:-1:exon
so has part: feature:4196907-4197032:-1:exon

XP_030311831.1
type: Protein
SIO_000068: ncbiprotein

position:4196907:-1
position: 4196907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4214395:-1
position: 4214395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4214173-4214395:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4209055-4209183:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4201830-4201993:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4196907-4197032:-1:exon

BOK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: BOK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bcl-2-related ovarian killer protein
translation: MEVLRRSSVFAAEVMEVFDRSPTDKELVSQAKALCRDYINSRLIRAGVSWSKPEHSAPVPGGKLAEVSTILLRLGDELEYIRPHVYRNIARQLNISLHSETLLTDAFLAVAAQIFTAGITWGKVVSLYAVAAGLAVDCVRQAQPAMVHTIVDCLGEFVRKTLVTWLKRRGGWADITKCVVNTDPSLRSHWLVAAVCSFGHFLKALFFVLLPER
SIO_010081: BOK
subclass of: SO_0000673
so part of: BOK
location: complement(join(4196907..4197032,4201830..4201993,4209055..4209183,4214173..4214395))
location: region:4196907-4214395:-1
so has part: feature:4214173-4214395:-1:exon
so has part: feature:4209055-4209183:-1:exon
so has part: feature:4201830-4201993:-1:exon
so has part: feature:4196907-4197032:-1:exon

XP_008499061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4214173-4214395:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4209055-4209183:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4201830-4201993:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4196907-4197032:-1:exon

STK25
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: STK25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4230453..4249152
location: region:4230453-4249152:1
so has part: feature:4230453-4249152:1:exon
subclass of: SO_0000010

103534845
type: Gene
SIO_000068: ncbigene

position:4230453:1
position: 4230453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4249152:1
position: 4249152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4230453-4249152:1:exon

STK25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: STK25
product: serine/threonine kinase 25
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 17 ESTs, 5 long SRA reads, 21 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030455970.1
SIO_010081: STK25
subclass of: SO_0000673
so part of: STK25
location: join(4230453..4230661,4231610..4231736,4237016..4237246,4238320..4238376,4239420..4239528,4240747..4240904,4242064..4242249,4242444..4242589,4243342..4243456,4243728..4243799,4245916..4246052,4246974..4249152)
location: region:4230453-4249152:1
so has part: feature:4230453-4230661:1:exon
so has part: feature:4231610-4231736:1:exon
so has part: feature:4237016-4237246:1:exon
so has part: feature:4238320-4238376:1:exon
so has part: feature:4239420-4239528:1:exon
so has part: feature:4240747-4240904:1:exon
so has part: feature:4242064-4242249:1:exon
so has part: feature:4242444-4242589:1:exon
so has part: feature:4243342-4243456:1:exon
so has part: feature:4243728-4243799:1:exon
so has part: feature:4245916-4246052:1:exon
so has part: feature:4246974-4249152:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4230453-4230661:1:exon

position:4230661:1
position: 4230661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4231610-4231736:1:exon

position:4231610:1
position: 4231610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4231736:1
position: 4231736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4237016-4237246:1:exon

position:4237016:1
position: 4237016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4237246:1
position: 4237246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4238320-4238376:1:exon

position:4238320:1
position: 4238320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4238376:1
position: 4238376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4239420-4239528:1:exon

position:4239420:1
position: 4239420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4239528:1
position: 4239528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4240747-4240904:1:exon

position:4240747:1
position: 4240747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4240904:1
position: 4240904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4242064-4242249:1:exon

position:4242064:1
position: 4242064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4242249:1
position: 4242249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4242444-4242589:1:exon

position:4242444:1
position: 4242444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4242589:1
position: 4242589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4243342-4243456:1:exon

position:4243342:1
position: 4243342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4243456:1
position: 4243456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4243728-4243799:1:exon

position:4243728:1
position: 4243728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4243799:1
position: 4243799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4245916-4246052:1:exon

position:4245916:1
position: 4245916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4246052:1
position: 4246052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4246974-4249152:1:exon

position:4246974:1
position: 4246974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STK25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: STK25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase 25
translation: MTSQPSLVLQKQISDHPAGMAHLREFASQHSRVDPEELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNNPPTLEGHHSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYTKKTSFLMELIDRFKRWKSEGHGEDSSSGDSDIDGDTEDGDQGPIWTFPPTIRPNSLSKLHKGMALHGSQKPTEPIKRQPRSQCLSTLVHPVFGELKDKHKQTGGNVGAMEELENAFSLAEESCPGISDKLIAHMVERVQRFSHSRNHLSSAR
SIO_010081: STK25
subclass of: SO_0000673
so part of: STK25
location: join(4231650..4231736,4237016..4237246,4238320..4238376,4239420..4239528,4240747..4240904,4242064..4242249,4242444..4242589,4243342..4243456,4243728..4243799,4245916..4246052,4246974..4247013)
location: region:4231650-4247013:1
so has part: feature:4231650-4231736:1:exon
so has part: feature:4237016-4237246:1:exon
so has part: feature:4238320-4238376:1:exon
so has part: feature:4239420-4239528:1:exon
so has part: feature:4240747-4240904:1:exon
so has part: feature:4242064-4242249:1:exon
so has part: feature:4242444-4242589:1:exon
so has part: feature:4243342-4243456:1:exon
so has part: feature:4243728-4243799:1:exon
so has part: feature:4245916-4246052:1:exon
so has part: feature:4246974-4247013:1:exon

XP_030311830.1
type: Protein
SIO_000068: ncbiprotein

position:4231650:1
position: 4231650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4247013:1
position: 4247013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4231650-4231736:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4237016-4237246:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4238320-4238376:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4239420-4239528:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4240747-4240904:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4242064-4242249:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4242444-4242589:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4243342-4243456:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4243728-4243799:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4245916-4246052:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4246974-4247013:1:exon

FARP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: FARP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4250291..4321241)
location: region:4250291-4321241:-1
so has part: feature:4250291-4321241:-1:exon
subclass of: SO_0000010

103534846
type: Gene
SIO_000068: ncbigene

position:4250291:-1
position: 4250291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4321241:-1
position: 4321241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4250291-4321241:-1:exon

FARP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FARP2
product: FERM, ARH/RhoGEF and pleckstrin domain protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030456080.1
SIO_010081: FARP2
subclass of: SO_0000673
so part of: FARP2
location: complement(join(4250291..4251914,4253003..4253154,4253928..4254035,4256236..4256399,4257071..4257189,4258884..4258966,4259576..4259665,4260035..4260103,4261220..4261350,4262470..4262707,4263435..4263516,4264987..4265120,4266356..4266445,4266642..4266820,4279454..4279694,4280397..4280454,4281602..4281670,4281809..4281972,4283297..4283386,4284325..4284472,4290496..4290610,4292337..4292434,4293674..4293752,4297663..4297705,4299297..4299401,4316399..4316632,4321155..4321241))
location: region:4250291-4321241:-1
so has part: feature:4321155-4321241:-1:exon
so has part: feature:4316399-4316632:-1:exon
so has part: feature:4299297-4299401:-1:exon
so has part: feature:4297663-4297705:-1:exon
so has part: feature:4293674-4293752:-1:exon
so has part: feature:4292337-4292434:-1:exon
so has part: feature:4290496-4290610:-1:exon
so has part: feature:4284325-4284472:-1:exon
so has part: feature:4283297-4283386:-1:exon
so has part: feature:4281809-4281972:-1:exon
so has part: feature:4281602-4281670:-1:exon
so has part: feature:4280397-4280454:-1:exon
so has part: feature:4279454-4279694:-1:exon
so has part: feature:4266642-4266820:-1:exon
so has part: feature:4266356-4266445:-1:exon
so has part: feature:4264987-4265120:-1:exon
so has part: feature:4263435-4263516:-1:exon
so has part: feature:4262470-4262707:-1:exon
so has part: feature:4261220-4261350:-1:exon
so has part: feature:4260035-4260103:-1:exon
so has part: feature:4259576-4259665:-1:exon
so has part: feature:4258884-4258966:-1:exon
so has part: feature:4257071-4257189:-1:exon
so has part: feature:4256236-4256399:-1:exon
so has part: feature:4253928-4254035:-1:exon
so has part: feature:4253003-4253154:-1:exon
so has part: feature:4250291-4251914:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4321155-4321241:-1:exon

position:4321155:-1
position: 4321155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4316399-4316632:-1:exon

position:4316399:-1
position: 4316399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4316632:-1
position: 4316632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4299297-4299401:-1:exon

position:4299297:-1
position: 4299297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4299401:-1
position: 4299401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4297663-4297705:-1:exon

position:4297663:-1
position: 4297663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4297705:-1
position: 4297705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4293674-4293752:-1:exon

position:4293674:-1
position: 4293674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4293752:-1
position: 4293752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4292337-4292434:-1:exon

position:4292337:-1
position: 4292337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4292434:-1
position: 4292434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4290496-4290610:-1:exon

position:4290496:-1
position: 4290496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4290610:-1
position: 4290610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4284325-4284472:-1:exon

position:4284325:-1
position: 4284325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4284472:-1
position: 4284472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4283297-4283386:-1:exon

position:4283297:-1
position: 4283297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4283386:-1
position: 4283386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4281809-4281972:-1:exon

position:4281809:-1
position: 4281809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4281972:-1
position: 4281972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4281602-4281670:-1:exon

position:4281602:-1
position: 4281602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4281670:-1
position: 4281670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4280397-4280454:-1:exon

position:4280397:-1
position: 4280397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4280454:-1
position: 4280454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4279454-4279694:-1:exon

position:4279454:-1
position: 4279454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4279694:-1
position: 4279694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4266642-4266820:-1:exon

position:4266642:-1
position: 4266642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4266820:-1
position: 4266820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4266356-4266445:-1:exon

position:4266356:-1
position: 4266356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4266445:-1
position: 4266445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4264987-4265120:-1:exon

position:4264987:-1
position: 4264987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4265120:-1
position: 4265120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4263435-4263516:-1:exon

position:4263435:-1
position: 4263435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4263516:-1
position: 4263516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4262470-4262707:-1:exon

position:4262470:-1
position: 4262470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4262707:-1
position: 4262707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4261220-4261350:-1:exon

position:4261220:-1
position: 4261220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4261350:-1
position: 4261350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4260035-4260103:-1:exon

position:4260035:-1
position: 4260035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4260103:-1
position: 4260103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4259576-4259665:-1:exon

position:4259576:-1
position: 4259576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4259665:-1
position: 4259665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4258884-4258966:-1:exon

position:4258884:-1
position: 4258884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4258966:-1
position: 4258966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4257071-4257189:-1:exon

position:4257071:-1
position: 4257071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4257189:-1
position: 4257189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4256236-4256399:-1:exon

position:4256236:-1
position: 4256236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4256399:-1
position: 4256399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4253928-4254035:-1:exon

position:4253928:-1
position: 4253928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4254035:-1
position: 4254035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:4253003-4253154:-1:exon

position:4253003:-1
position: 4253003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4253154:-1
position: 4253154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:4250291-4251914:-1:exon

position:4251914:-1
position: 4251914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FARP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FARP2
product: FERM, ARH/RhoGEF and pleckstrin domain protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030456079.1
SIO_010081: FARP2
subclass of: SO_0000673
so part of: FARP2
location: complement(join(4250291..4251914,4253003..4253154,4253928..4254035,4256236..4256399,4257071..4257189,4258884..4258966,4259576..4259665,4260035..4260103,4261220..4261350,4262470..4262707,4263435..4263516,4264987..4265120,4266356..4266445,4266642..4266820,4279454..4279694,4280397..4280454,4281602..4281670,4281809..4281972,4283291..4283386,4284325..4284472,4290496..4290610,4292337..4292434,4293674..4293752,4297663..4297705,4299297..4299401,4316399..4316632,4321155..4321241))
location: region:4250291-4321241:-1
so has part: feature:4321155-4321241:-1:exon
so has part: feature:4316399-4316632:-1:exon
so has part: feature:4299297-4299401:-1:exon
so has part: feature:4297663-4297705:-1:exon
so has part: feature:4293674-4293752:-1:exon
so has part: feature:4292337-4292434:-1:exon
so has part: feature:4290496-4290610:-1:exon
so has part: feature:4284325-4284472:-1:exon
so has part: feature:4283291-4283386:-1:exon
so has part: feature:4281809-4281972:-1:exon
so has part: feature:4281602-4281670:-1:exon
so has part: feature:4280397-4280454:-1:exon
so has part: feature:4279454-4279694:-1:exon
so has part: feature:4266642-4266820:-1:exon
so has part: feature:4266356-4266445:-1:exon
so has part: feature:4264987-4265120:-1:exon
so has part: feature:4263435-4263516:-1:exon
so has part: feature:4262470-4262707:-1:exon
so has part: feature:4261220-4261350:-1:exon
so has part: feature:4260035-4260103:-1:exon
so has part: feature:4259576-4259665:-1:exon
so has part: feature:4258884-4258966:-1:exon
so has part: feature:4257071-4257189:-1:exon
so has part: feature:4256236-4256399:-1:exon
so has part: feature:4253928-4254035:-1:exon
so has part: feature:4253003-4253154:-1:exon
so has part: feature:4250291-4251914:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4321155-4321241:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4316399-4316632:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4299297-4299401:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4297663-4297705:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4293674-4293752:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4292337-4292434:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4290496-4290610:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4284325-4284472:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4283291-4283386:-1:exon

position:4283291:-1
position: 4283291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4281809-4281972:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4281602-4281670:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4280397-4280454:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4279454-4279694:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4266642-4266820:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4266356-4266445:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4264987-4265120:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4263435-4263516:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4262470-4262707:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4261220-4261350:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4260035-4260103:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4259576-4259665:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4258884-4258966:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4257071-4257189:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4256236-4256399:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4253928-4254035:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4253003-4253154:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4250291-4251914:-1:exon

FARP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FARP2
product: FERM, ARH/RhoGEF and pleckstrin domain protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030456081.1
SIO_010081: FARP2
subclass of: SO_0000673
so part of: FARP2
location: complement(join(4250291..4251914,4253003..4253154,4253928..4254035,4256236..4256399,4257071..4257189,4258884..4258966,4259576..4259665,4260035..4260103,4261220..4261350,4262470..4262707,4263435..4263516,4264987..4265120,4266356..4266445,4266642..4266820,4279454..4279694,4280397..4280454,4281602..4281670,4281809..4281972,4283291..4283386,4284325..4284472,4290496..4290610,4292337..4292434,4293674..4293752,4297670..4297705))
location: region:4250291-4297705:-1
so has part: feature:4297670-4297705:-1:exon
so has part: feature:4293674-4293752:-1:exon
so has part: feature:4292337-4292434:-1:exon
so has part: feature:4290496-4290610:-1:exon
so has part: feature:4284325-4284472:-1:exon
so has part: feature:4283291-4283386:-1:exon
so has part: feature:4281809-4281972:-1:exon
so has part: feature:4281602-4281670:-1:exon
so has part: feature:4280397-4280454:-1:exon
so has part: feature:4279454-4279694:-1:exon
so has part: feature:4266642-4266820:-1:exon
so has part: feature:4266356-4266445:-1:exon
so has part: feature:4264987-4265120:-1:exon
so has part: feature:4263435-4263516:-1:exon
so has part: feature:4262470-4262707:-1:exon
so has part: feature:4261220-4261350:-1:exon
so has part: feature:4260035-4260103:-1:exon
so has part: feature:4259576-4259665:-1:exon
so has part: feature:4258884-4258966:-1:exon
so has part: feature:4257071-4257189:-1:exon
so has part: feature:4256236-4256399:-1:exon
so has part: feature:4253928-4254035:-1:exon
so has part: feature:4253003-4253154:-1:exon
so has part: feature:4250291-4251914:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4297670-4297705:-1:exon

position:4297670:-1
position: 4297670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4293674-4293752:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4292337-4292434:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4290496-4290610:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4284325-4284472:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4283291-4283386:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4281809-4281972:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4281602-4281670:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4280397-4280454:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4279454-4279694:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4266642-4266820:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4266356-4266445:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4264987-4265120:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4263435-4263516:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4262470-4262707:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4261220-4261350:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4260035-4260103:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4259576-4259665:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4258884-4258966:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4257071-4257189:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4256236-4256399:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4253928-4254035:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4253003-4253154:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4250291-4251914:-1:exon

FARP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FARP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FERM, ARHGEF and pleckstrin domain-containing protein 2 isoform X2
translation: MGEIEGTYRVLQTPGSRLGAQKTTGVSTLEPGQNLSTAMASGAAKTQERDLPIKIKMLDNTVEVLDIESKHYGQTLLTEVYKHLNLIESDYFGIEFQNIQSYWIWLEPMKPVIKQVRRPKTTMLRLAVKFFPPDPGQLQEEYTRYLFALQIKRDLAEERLTCSDNTAALLVSHLLQSEIGDFDESEDREHLKTNQYLPNQERIEGKILEFHRKHVGQTPAESDFQVLEIARKLEMYGIRFHLASDREGTKINLSVSHMGVLVFQGNTKINTFNWSKVRKLSFKRKRFLIKLHPEGPYQDTLEFLLGSRDECKNFWKICVEYHTFFRLFDQPKPKAKAVFFTRGSSFRYSGRTQKQLVDYIKDSGMKKMPYERRHSKARASTRASNPDVPKQSVPFTEGLRTPGSPASAAAPFHSVHSSATPTPVLPIFAETNPSSLDPRAPYTRIPENNTETPAEEVGRKLMQQPGSPMLQGLPVDHHQISSLVLKSPLSSNPTFQVNLNTAAQGSSPLLSPVLSDAGGARIEEDEEMKRKRYPTDKAYFIAKEILATERTYLKDLEVITVWFRSAVIKENAMPEGLMTLLFSNIDPIYEFHRGFLKEVEQRLSLWEGKTNAHLKGDHQRIGDVMLRNMRALKEFTSYLQKHDEVLVELEKATKRLKKLEVVYKEFELQKVCYLPLNTFLLKPIQRLMHYKLILGRLCKHYTAEHRDFADCRNALKEVTEMTSQLQHSFIRLENFQKLTELQHDLIGIDNLTAPGREFIREGCLYKLTKKGLQQRMFFLFSDMLLYTSKGVTGTNQFKVHGHLPLHGMLVEESENEWAVPHCFTIYSAQKTIVVAASTRLEMGKWMEDLNMAIEIAKKSTEKSDMLLENSICNRSNRSSDEVSLEQESEDDIHSSRSSLDRQSHHRANTTMHVCWYRNTSVSMTDHSVAVENQLSGYLLRKFKNSNGWQKLWVVFTNFCLFFYKTHQDDYPLASLPLLGYTVSSPVEADGIQKDFVFKLQFKSHVYFFRAESKYTFERWMEVIKRATSSPARSSLLLPKDKDSHTD
SIO_010081: FARP2
subclass of: SO_0000673
so part of: FARP2
location: complement(join(4251827..4251914,4253003..4253154,4253928..4254035,4256236..4256399,4257071..4257189,4258884..4258966,4259576..4259665,4260035..4260103,4261220..4261350,4262470..4262707,4263435..4263516,4264987..4265120,4266356..4266445,4266642..4266820,4279454..4279694,4280397..4280454,4281602..4281670,4281809..4281972,4283297..4283386,4284325..4284472,4290496..4290610,4292337..4292434,4293674..4293752,4297663..4297705,4299297..4299401,4316399..4316602))
location: region:4251827-4316602:-1
so has part: feature:4316399-4316602:-1:exon
so has part: feature:4299297-4299401:-1:exon
so has part: feature:4297663-4297705:-1:exon
so has part: feature:4293674-4293752:-1:exon
so has part: feature:4292337-4292434:-1:exon
so has part: feature:4290496-4290610:-1:exon
so has part: feature:4284325-4284472:-1:exon
so has part: feature:4283297-4283386:-1:exon
so has part: feature:4281809-4281972:-1:exon
so has part: feature:4281602-4281670:-1:exon
so has part: feature:4280397-4280454:-1:exon
so has part: feature:4279454-4279694:-1:exon
so has part: feature:4266642-4266820:-1:exon
so has part: feature:4266356-4266445:-1:exon
so has part: feature:4264987-4265120:-1:exon
so has part: feature:4263435-4263516:-1:exon
so has part: feature:4262470-4262707:-1:exon
so has part: feature:4261220-4261350:-1:exon
so has part: feature:4260035-4260103:-1:exon
so has part: feature:4259576-4259665:-1:exon
so has part: feature:4258884-4258966:-1:exon
so has part: feature:4257071-4257189:-1:exon
so has part: feature:4256236-4256399:-1:exon
so has part: feature:4253928-4254035:-1:exon
so has part: feature:4253003-4253154:-1:exon
so has part: feature:4251827-4251914:-1:exon

XP_030311940.1
type: Protein
SIO_000068: ncbiprotein

position:4251827:-1
position: 4251827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4316602:-1
position: 4316602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4316399-4316602:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4299297-4299401:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4297663-4297705:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4293674-4293752:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4292337-4292434:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4290496-4290610:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4284325-4284472:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4283297-4283386:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4281809-4281972:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4281602-4281670:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4280397-4280454:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4279454-4279694:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4266642-4266820:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4266356-4266445:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4264987-4265120:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4263435-4263516:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4262470-4262707:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4261220-4261350:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4260035-4260103:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4259576-4259665:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4258884-4258966:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4257071-4257189:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4256236-4256399:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4253928-4254035:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4253003-4253154:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4251827-4251914:-1:exon

FARP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FARP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FERM, ARHGEF and pleckstrin domain-containing protein 2 isoform X1
translation: MGEIEGTYRVLQTPGSRLGAQKTTGVSTLEPGQNLSTAMASGAAKTQERDLPIKIKMLDNTVEVLDIESKHYGQTLLTEVYKHLNLIESDYFGIEFQNIQSYWIWLEPMKPVIKQVRRPKTTMLRLAVKFFPPDPGQLQEEYTRYLFALQIKRDLAEERLTCSDNTAALLVSHLLQSEIGDFDESEDREHLKTNQYLPNQERIEGKILEFHRKHVGQTPAESDFQVLEIARKLEMYGIRFHLASDREGTKINLSVSHMGVLVFQGNTKINTFNWSKVRKLSFKRKRFLIKLHPEVCGPYQDTLEFLLGSRDECKNFWKICVEYHTFFRLFDQPKPKAKAVFFTRGSSFRYSGRTQKQLVDYIKDSGMKKMPYERRHSKARASTRASNPDVPKQSVPFTEGLRTPGSPASAAAPFHSVHSSATPTPVLPIFAETNPSSLDPRAPYTRIPENNTETPAEEVGRKLMQQPGSPMLQGLPVDHHQISSLVLKSPLSSNPTFQVNLNTAAQGSSPLLSPVLSDAGGARIEEDEEMKRKRYPTDKAYFIAKEILATERTYLKDLEVITVWFRSAVIKENAMPEGLMTLLFSNIDPIYEFHRGFLKEVEQRLSLWEGKTNAHLKGDHQRIGDVMLRNMRALKEFTSYLQKHDEVLVELEKATKRLKKLEVVYKEFELQKVCYLPLNTFLLKPIQRLMHYKLILGRLCKHYTAEHRDFADCRNALKEVTEMTSQLQHSFIRLENFQKLTELQHDLIGIDNLTAPGREFIREGCLYKLTKKGLQQRMFFLFSDMLLYTSKGVTGTNQFKVHGHLPLHGMLVEESENEWAVPHCFTIYSAQKTIVVAASTRLEMGKWMEDLNMAIEIAKKSTEKSDMLLENSICNRSNRSSDEVSLEQESEDDIHSSRSSLDRQSHHRANTTMHVCWYRNTSVSMTDHSVAVENQLSGYLLRKFKNSNGWQKLWVVFTNFCLFFYKTHQDDYPLASLPLLGYTVSSPVEADGIQKDFVFKLQFKSHVYFFRAESKYTFERWMEVIKRATSSPARSSLLLPKDKDSHTD
SIO_010081: FARP2
subclass of: SO_0000673
so part of: FARP2
location: complement(join(4251827..4251914,4253003..4253154,4253928..4254035,4256236..4256399,4257071..4257189,4258884..4258966,4259576..4259665,4260035..4260103,4261220..4261350,4262470..4262707,4263435..4263516,4264987..4265120,4266356..4266445,4266642..4266820,4279454..4279694,4280397..4280454,4281602..4281670,4281809..4281972,4283291..4283386,4284325..4284472,4290496..4290610,4292337..4292434,4293674..4293752,4297663..4297705,4299297..4299401,4316399..4316602))
location: region:4251827-4316602:-1
so has part: feature:4316399-4316602:-1:exon
so has part: feature:4299297-4299401:-1:exon
so has part: feature:4297663-4297705:-1:exon
so has part: feature:4293674-4293752:-1:exon
so has part: feature:4292337-4292434:-1:exon
so has part: feature:4290496-4290610:-1:exon
so has part: feature:4284325-4284472:-1:exon
so has part: feature:4283291-4283386:-1:exon
so has part: feature:4281809-4281972:-1:exon
so has part: feature:4281602-4281670:-1:exon
so has part: feature:4280397-4280454:-1:exon
so has part: feature:4279454-4279694:-1:exon
so has part: feature:4266642-4266820:-1:exon
so has part: feature:4266356-4266445:-1:exon
so has part: feature:4264987-4265120:-1:exon
so has part: feature:4263435-4263516:-1:exon
so has part: feature:4262470-4262707:-1:exon
so has part: feature:4261220-4261350:-1:exon
so has part: feature:4260035-4260103:-1:exon
so has part: feature:4259576-4259665:-1:exon
so has part: feature:4258884-4258966:-1:exon
so has part: feature:4257071-4257189:-1:exon
so has part: feature:4256236-4256399:-1:exon
so has part: feature:4253928-4254035:-1:exon
so has part: feature:4253003-4253154:-1:exon
so has part: feature:4251827-4251914:-1:exon

XP_030311939.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4316399-4316602:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4299297-4299401:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4297663-4297705:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4293674-4293752:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4292337-4292434:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4290496-4290610:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4284325-4284472:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4283291-4283386:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4281809-4281972:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4281602-4281670:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4280397-4280454:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4279454-4279694:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4266642-4266820:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4266356-4266445:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4264987-4265120:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4263435-4263516:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4262470-4262707:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4261220-4261350:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4260035-4260103:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4259576-4259665:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4258884-4258966:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4257071-4257189:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4256236-4256399:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4253928-4254035:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4253003-4253154:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4251827-4251914:-1:exon

FARP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FARP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FERM, ARHGEF and pleckstrin domain-containing protein 2 isoform X3
translation: MLRLAVKFFPPDPGQLQEEYTRYLFALQIKRDLAEERLTCSDNTAALLVSHLLQSEIGDFDESEDREHLKTNQYLPNQERIEGKILEFHRKHVGQTPAESDFQVLEIARKLEMYGIRFHLASDREGTKINLSVSHMGVLVFQGNTKINTFNWSKVRKLSFKRKRFLIKLHPEVCGPYQDTLEFLLGSRDECKNFWKICVEYHTFFRLFDQPKPKAKAVFFTRGSSFRYSGRTQKQLVDYIKDSGMKKMPYERRHSKARASTRASNPDVPKQSVPFTEGLRTPGSPASAAAPFHSVHSSATPTPVLPIFAETNPSSLDPRAPYTRIPENNTETPAEEVGRKLMQQPGSPMLQGLPVDHHQISSLVLKSPLSSNPTFQVNLNTAAQGSSPLLSPVLSDAGGARIEEDEEMKRKRYPTDKAYFIAKEILATERTYLKDLEVITVWFRSAVIKENAMPEGLMTLLFSNIDPIYEFHRGFLKEVEQRLSLWEGKTNAHLKGDHQRIGDVMLRNMRALKEFTSYLQKHDEVLVELEKATKRLKKLEVVYKEFELQKVCYLPLNTFLLKPIQRLMHYKLILGRLCKHYTAEHRDFADCRNALKEVTEMTSQLQHSFIRLENFQKLTELQHDLIGIDNLTAPGREFIREGCLYKLTKKGLQQRMFFLFSDMLLYTSKGVTGTNQFKVHGHLPLHGMLVEESENEWAVPHCFTIYSAQKTIVVAASTRLEMGKWMEDLNMAIEIAKKSTEKSDMLLENSICNRSNRSSDEVSLEQESEDDIHSSRSSLDRQSHHRANTTMHVCWYRNTSVSMTDHSVAVENQLSGYLLRKFKNSNGWQKLWVVFTNFCLFFYKTHQDDYPLASLPLLGYTVSSPVEADGIQKDFVFKLQFKSHVYFFRAESKYTFERWMEVIKRATSSPARSSLLLPKDKDSHTD
SIO_010081: FARP2
subclass of: SO_0000673
so part of: FARP2
location: complement(join(4251827..4251914,4253003..4253154,4253928..4254035,4256236..4256399,4257071..4257189,4258884..4258966,4259576..4259665,4260035..4260103,4261220..4261350,4262470..4262707,4263435..4263516,4264987..4265120,4266356..4266445,4266642..4266820,4279454..4279694,4280397..4280454,4281602..4281670,4281809..4281972,4283291..4283386,4284325..4284472,4290496..4290610,4292337..4292434,4293674..4293738))
location: region:4251827-4293738:-1
so has part: feature:4293674-4293738:-1:exon
so has part: feature:4292337-4292434:-1:exon
so has part: feature:4290496-4290610:-1:exon
so has part: feature:4284325-4284472:-1:exon
so has part: feature:4283291-4283386:-1:exon
so has part: feature:4281809-4281972:-1:exon
so has part: feature:4281602-4281670:-1:exon
so has part: feature:4280397-4280454:-1:exon
so has part: feature:4279454-4279694:-1:exon
so has part: feature:4266642-4266820:-1:exon
so has part: feature:4266356-4266445:-1:exon
so has part: feature:4264987-4265120:-1:exon
so has part: feature:4263435-4263516:-1:exon
so has part: feature:4262470-4262707:-1:exon
so has part: feature:4261220-4261350:-1:exon
so has part: feature:4260035-4260103:-1:exon
so has part: feature:4259576-4259665:-1:exon
so has part: feature:4258884-4258966:-1:exon
so has part: feature:4257071-4257189:-1:exon
so has part: feature:4256236-4256399:-1:exon
so has part: feature:4253928-4254035:-1:exon
so has part: feature:4253003-4253154:-1:exon
so has part: feature:4251827-4251914:-1:exon

XP_030311941.1
type: Protein
SIO_000068: ncbiprotein

position:4293738:-1
position: 4293738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4293674-4293738:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4292337-4292434:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4290496-4290610:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4284325-4284472:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4283291-4283386:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4281809-4281972:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4281602-4281670:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4280397-4280454:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4279454-4279694:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4266642-4266820:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4266356-4266445:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4264987-4265120:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4263435-4263516:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4262470-4262707:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4261220-4261350:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4260035-4260103:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4259576-4259665:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4258884-4258966:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4257071-4257189:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4256236-4256399:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4253928-4254035:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4253003-4253154:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4251827-4251914:-1:exon

FARP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FARP2
product: FERM, ARH/RhoGEF and pleckstrin domain protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030456082.1
SIO_010081: FARP2
subclass of: SO_0000673
so part of: FARP2
location: complement(join(4259583..4259665,4260035..4260103,4261225..4261350,4262470..4262707,4263435..4263516,4264987..4265120,4266356..4266445,4266642..4266820,4279454..4279694,4280397..4280454,4281602..4281670,4281809..4281972,4283291..4283386,4284325..4284472,4290496..4290610,4292337..4292434,4293674..4293752,4297663..4297705,4299297..4299401,4316399..4316632,4321155..4321241))
location: region:4259583-4321241:-1
so has part: feature:4321155-4321241:-1:exon
so has part: feature:4316399-4316632:-1:exon
so has part: feature:4299297-4299401:-1:exon
so has part: feature:4297663-4297705:-1:exon
so has part: feature:4293674-4293752:-1:exon
so has part: feature:4292337-4292434:-1:exon
so has part: feature:4290496-4290610:-1:exon
so has part: feature:4284325-4284472:-1:exon
so has part: feature:4283291-4283386:-1:exon
so has part: feature:4281809-4281972:-1:exon
so has part: feature:4281602-4281670:-1:exon
so has part: feature:4280397-4280454:-1:exon
so has part: feature:4279454-4279694:-1:exon
so has part: feature:4266642-4266820:-1:exon
so has part: feature:4266356-4266445:-1:exon
so has part: feature:4264987-4265120:-1:exon
so has part: feature:4263435-4263516:-1:exon
so has part: feature:4262470-4262707:-1:exon
so has part: feature:4261225-4261350:-1:exon
so has part: feature:4260035-4260103:-1:exon
so has part: feature:4259583-4259665:-1:exon

position:4259583:-1
position: 4259583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4321155-4321241:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4316399-4316632:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4299297-4299401:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4297663-4297705:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4293674-4293752:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4292337-4292434:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4290496-4290610:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4284325-4284472:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4283291-4283386:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4281809-4281972:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4281602-4281670:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4280397-4280454:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4279454-4279694:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4266642-4266820:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4266356-4266445:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4264987-4265120:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4263435-4263516:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4262470-4262707:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4261225-4261350:-1:exon

position:4261225:-1
position: 4261225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4260035-4260103:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4259583-4259665:-1:exon

FARP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FARP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FERM, ARHGEF and pleckstrin domain-containing protein 2 isoform X4
translation: MGEIEGTYRVLQTPGSRLGAQKTTGVSTLEPGQNLSTAMASGAAKTQERDLPIKIKMLDNTVEVLDIESKHYGQTLLTEVYKHLNLIESDYFGIEFQNIQSYWIWLEPMKPVIKQVRRPKTTMLRLAVKFFPPDPGQLQEEYTRYLFALQIKRDLAEERLTCSDNTAALLVSHLLQSEIGDFDESEDREHLKTNQYLPNQERIEGKILEFHRKHVGQTPAESDFQVLEIARKLEMYGIRFHLASDREGTKINLSVSHMGVLVFQGNTKINTFNWSKVRKLSFKRKRFLIKLHPEVCGPYQDTLEFLLGSRDECKNFWKICVEYHTFFRLFDQPKPKAKAVFFTRGSSFRYSGRTQKQLVDYIKDSGMKKMPYERRHSKARASTRASNPDVPKQSVPFTEGLRTPGSPASAAAPFHSVHSSATPTPVLPIFAETNPSSLDPRAPYTRIPENNTETPAEEVGRKLMQQPGSPMLQGLPVDHHQISSLVLKSPLSSNPTFQVNLNTAAQGSSPLLSPVLSDAGGARIEEDEEMKRKRYPTDKAYFIAKEILATERTYLKDLEVITVWFRSAVIKENAMPEGLMTLLFSNIDPIYEFHRGFLKEVEQRLSLWEGKTNAHLKGDHQRIGDVMLRNMRALKEFTSYLQKHDEVLVELEKATKRLKKLEVVYKEFELQKVCYLPLNTFLLKPIQRLMHYKLILGRLCKHYTAEHRDFADCRNALKEVTEMTSQLQHSFIRLENFQKLTELQHDLIGIDNLTAPGVYPGRLFVQAH
SIO_010081: FARP2
subclass of: SO_0000673
so part of: FARP2
location: complement(join(4260066..4260103,4261225..4261350,4262470..4262707,4263435..4263516,4264987..4265120,4266356..4266445,4266642..4266820,4279454..4279694,4280397..4280454,4281602..4281670,4281809..4281972,4283291..4283386,4284325..4284472,4290496..4290610,4292337..4292434,4293674..4293752,4297663..4297705,4299297..4299401,4316399..4316602))
location: region:4260066-4316602:-1
so has part: feature:4316399-4316602:-1:exon
so has part: feature:4299297-4299401:-1:exon
so has part: feature:4297663-4297705:-1:exon
so has part: feature:4293674-4293752:-1:exon
so has part: feature:4292337-4292434:-1:exon
so has part: feature:4290496-4290610:-1:exon
so has part: feature:4284325-4284472:-1:exon
so has part: feature:4283291-4283386:-1:exon
so has part: feature:4281809-4281972:-1:exon
so has part: feature:4281602-4281670:-1:exon
so has part: feature:4280397-4280454:-1:exon
so has part: feature:4279454-4279694:-1:exon
so has part: feature:4266642-4266820:-1:exon
so has part: feature:4266356-4266445:-1:exon
so has part: feature:4264987-4265120:-1:exon
so has part: feature:4263435-4263516:-1:exon
so has part: feature:4262470-4262707:-1:exon
so has part: feature:4261225-4261350:-1:exon
so has part: feature:4260066-4260103:-1:exon

XP_030311942.1
type: Protein
SIO_000068: ncbiprotein

position:4260066:-1
position: 4260066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4316399-4316602:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4299297-4299401:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4297663-4297705:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4293674-4293752:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4292337-4292434:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4290496-4290610:-1:exon