Calypte anna isolate BGI_N300 chromosome 6, bCalAnn1_v1.p, whole genome shotgun sequence.
type: Entry
definition: Calypte anna isolate BGI_N300 chromosome 6, bCalAnn1_v1.p, whole genome shotgun sequence.
sequence version: NC_044252.1
sequence date: 2019-08-24
sequence: sequence
division: CON
label: NC_044252.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA558503
dblink: SAMN02265252
keyword: WGS
keyword: RefSeq
source: Calypte anna (Anna's hummingbird)
organism: Calypte anna
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Apodiformes; Trochilidae; Calypte.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM012119.1.\nAssembly name: bCalAnn1_v1.p\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2019/05/16. The original whole-genome shotgun project has the\naccession RRCD00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 26-SEP-2018\nAssembly Method :: FALCON v. 5.1.1; FALCON unzip v. 1.0.2;\n scaff10X v. git 4.28.2018; Bionano Solve\n DLS v. 3.2.1; Salsa2 HiC v. 2.0;\n smrtanalysis Arrow polishing & gap\n filling v. 5.1.0.26412; longranger align\n v. 2.2.2; freebayes v. 1.2.0;\n purge_haplotigs v. bit 7.10.2018; gEVAL\n manual curation v. 2018-09-07\nAssembly Name :: bCalAnn1_v1.p\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 54.0x\nSequencing Technology :: PacBio RSII; 10X Genomics linked reads;\n Bionano Genomics DLS; Arima Genomics HiC\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Calypte anna Annotation Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 35401958
topology: linear
so has quality: SO_0000987
location: 1..35401958
location: region:1-35401958:1
RO_0002162: 9244

NC_044252
type: RefSeq
SIO_000068: refseq

PRJNA558503
type: BioProject
SIO_000068: bioproject

SAMN02265252
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35401958:1
position: 35401958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-35401958:1:source
so part of: sequence
organism: Calypte anna
mol type: genomic DNA
isolate: BGI_N300
chromosome: 6
sex: female
country: USA

9244
type: Taxonomy
SIO_000068: taxonomy

LOC115598555
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115598555
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13063..17767)
location: region:13063-17767:-1
so has part: feature:13063-17767:-1:exon
subclass of: SO_0000011

115598555
type: Gene
SIO_000068: ncbigene

position:13063:-1
position: 13063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17767:-1
position: 17767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13063-17767:-1:exon

LOC115598555
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115598555
product: uncharacterized LOC115598555
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003987725.1
SIO_010081: LOC115598555
subclass of: SO_0000673
so part of: LOC115598555
location: complement(join(13063..13330,13453..13704,17732..17767))
location: region:13063-17767:-1
so has part: feature:17732-17767:-1:exon
so has part: feature:13453-13704:-1:exon
so has part: feature:13063-13330:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17732-17767:-1:exon

position:17732:-1
position: 17732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13453-13704:-1:exon

position:13453:-1
position: 13453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13704:-1
position: 13704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13063-13330:-1:exon

position:13330:-1
position: 13330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SCD
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SCD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 22012..42362
location: region:22012-42362:1
so has part: feature:22012-42362:1:exon
subclass of: SO_0000010

103537670
type: Gene
SIO_000068: ncbigene

position:22012:1
position: 22012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42362:1
position: 42362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22012-42362:1:exon

SCD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SCD
product: stearoyl-CoA desaturase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 12 ESTs, 8 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_008503972.2
SIO_010081: SCD
subclass of: SO_0000673
so part of: SCD
location: join(22012..22319,26045..26330,33038..33168,36343..36548,37354..37586,38594..42362)
location: region:22012-42362:1
so has part: feature:22012-22319:1:exon
so has part: feature:26045-26330:1:exon
so has part: feature:33038-33168:1:exon
so has part: feature:36343-36548:1:exon
so has part: feature:37354-37586:1:exon
so has part: feature:38594-42362:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22012-22319:1:exon

position:22319:1
position: 22319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:26045-26330:1:exon

position:26045:1
position: 26045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26330:1
position: 26330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:33038-33168:1:exon

position:33038:1
position: 33038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33168:1
position: 33168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:36343-36548:1:exon

position:36343:1
position: 36343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36548:1
position: 36548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:37354-37586:1:exon

position:37354:1
position: 37354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37586:1
position: 37586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:38594-42362:1:exon

position:38594:1
position: 38594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SCD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SCD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acyl-CoA desaturase
translation: MPAHLLQEEEFSSASSTSTVGTVTSRATRNGDAVMAKDSFNHEELAGDRGMMDDIFDETYREKEGPKPPIRYVWRNIILMSLLHLGAIFGLTLIPSAKIQTLAWAVVCFLVSALGITAGSHRLWSHRSYKATLPLRIFLTIANSMAFQNDIYEWVRDHRVHHKFSETDADPHNAMRGFFFSHVGWLLVRKHPDVIEKGQKLDLSDMKADKVVMFQRRYYKASVVLLCFTLPTVVPCYFWDESIVISFFIPAILRYTIGLNATWLVNSAAHMYGNRPYDQNINPRENPLVSLGAIGEGFHNYHHTFPYDYSTSEFGWHLNLTTAFIDLMCLLGLASDRKKVSKEAILARKMRTGDGSHKSG
SIO_010081: SCD
subclass of: SO_0000673
so part of: SCD
location: join(22293..22319,26045..26330,33038..33168,36343..36548,37354..37586,38594..38793)
location: region:22293-38793:1
so has part: feature:22293-22319:1:exon
so has part: feature:26045-26330:1:exon
so has part: feature:33038-33168:1:exon
so has part: feature:36343-36548:1:exon
so has part: feature:37354-37586:1:exon
so has part: feature:38594-38793:1:exon

XP_008502194.1
type: Protein
SIO_000068: ncbiprotein

position:22293:1
position: 22293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38793:1
position: 38793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22293-22319:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:26045-26330:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:33038-33168:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:36343-36548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:37354-37586:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:38594-38793:1:exon

WNT8B
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: WNT8B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 66252..74543
location: region:66252-74543:1
so has part: feature:66252-74543:1:exon
subclass of: SO_0000010

103537671
type: Gene
SIO_000068: ncbigene

position:66252:1
position: 66252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74543:1
position: 74543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66252-74543:1:exon

WNT8B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: WNT8B
product: Wnt family member 8B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 33 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030453580.1
SIO_010081: WNT8B
subclass of: SO_0000673
so part of: WNT8B
location: join(66252..66290,69428..69461,70217..70355,71556..71681,73256..73398,73562..74543)
location: region:66252-74543:1
so has part: feature:66252-66290:1:exon
so has part: feature:69428-69461:1:exon
so has part: feature:70217-70355:1:exon
so has part: feature:71556-71681:1:exon
so has part: feature:73256-73398:1:exon
so has part: feature:73562-74543:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:66252-66290:1:exon

position:66290:1
position: 66290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:69428-69461:1:exon

position:69428:1
position: 69428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69461:1
position: 69461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:70217-70355:1:exon

position:70217:1
position: 70217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70355:1
position: 70355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:71556-71681:1:exon

position:71556:1
position: 71556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71681:1
position: 71681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:73256-73398:1:exon

position:73256:1
position: 73256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73398:1
position: 73398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:73562-74543:1:exon

position:73562:1
position: 73562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WNT8B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: WNT8B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Wnt-8b
translation: MTGPKAYLIYSSSVAAGAQSGIEECKFQFAWDRWNCPERALQLSSHGGLRSANRETAFVHAISSAGVMYTLTRNCSLGDFDNCGCDDSRNGQLGGQGWLWGGCSDNVGFGEAISKQFVDALETGQDARAAMNLHNNEAGRKAVKGTMKRTCKCHGVSGSCTTQTCWLQLPEFREVGTYLKERYHKALKVDLLQGAGNSAASRGAIAETFSSISKKELVHLEDSPDYCLENKTLGLLGTEGRECLKRGKALSKWEKRSCRRLCGDCGLAVEERRAEMVSSCNCKFHWCCAVRCEQCRKRVTKYFCVRKEKRERSGGGGASHKLKRKL
SIO_010081: WNT8B
subclass of: SO_0000673
so part of: WNT8B
location: join(69447..69461,70217..70355,71556..71681,73256..73398,73562..74119)
location: region:69447-74119:1
so has part: feature:69447-69461:1:exon
so has part: feature:70217-70355:1:exon
so has part: feature:71556-71681:1:exon
so has part: feature:73256-73398:1:exon
so has part: feature:73562-74119:1:exon

XP_030309440.1
type: Protein
SIO_000068: ncbiprotein

position:69447:1
position: 69447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74119:1
position: 74119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69447-69461:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:70217-70355:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:71556-71681:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:73256-73398:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:73562-74119:1:exon

SEC31B
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SEC31B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(78762..109196)
location: region:78762-109196:-1
so has part: feature:78762-109196:-1:exon
subclass of: SO_0000010

103537672
type: Gene
SIO_000068: ncbigene

position:78762:-1
position: 78762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109196:-1
position: 109196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78762-109196:-1:exon

SEC31B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SEC31B
product: SEC31 homolog B, COPII coat complex component, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030453570.1
SIO_010081: SEC31B
subclass of: SO_0000673
so part of: SEC31B
location: complement(join(78762..80484,81206..81277,82231..82347,82730..82876,84091..84146,87893..88216,88571..88784,89437..89625,90212..90385,91116..91267,91704..91830,92495..92673,93074..93182,93819..93902,94483..94557,95329..95556,97092..97247,98939..99100,100705..100804,101071..101213,101706..101846,102923..103018,103732..103927,104720..104843,106440..106528,109033..109186))
location: region:78762-109186:-1
so has part: feature:109033-109186:-1:exon
so has part: feature:106440-106528:-1:exon
so has part: feature:104720-104843:-1:exon
so has part: feature:103732-103927:-1:exon
so has part: feature:102923-103018:-1:exon
so has part: feature:101706-101846:-1:exon
so has part: feature:101071-101213:-1:exon
so has part: feature:100705-100804:-1:exon
so has part: feature:98939-99100:-1:exon
so has part: feature:97092-97247:-1:exon
so has part: feature:95329-95556:-1:exon
so has part: feature:94483-94557:-1:exon
so has part: feature:93819-93902:-1:exon
so has part: feature:93074-93182:-1:exon
so has part: feature:92495-92673:-1:exon
so has part: feature:91704-91830:-1:exon
so has part: feature:91116-91267:-1:exon
so has part: feature:90212-90385:-1:exon
so has part: feature:89437-89625:-1:exon
so has part: feature:88571-88784:-1:exon
so has part: feature:87893-88216:-1:exon
so has part: feature:84091-84146:-1:exon
so has part: feature:82730-82876:-1:exon
so has part: feature:82231-82347:-1:exon
so has part: feature:81206-81277:-1:exon
so has part: feature:78762-80484:-1:exon

position:109186:-1
position: 109186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109033-109186:-1:exon

position:109033:-1
position: 109033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:106440-106528:-1:exon

position:106440:-1
position: 106440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106528:-1
position: 106528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:104720-104843:-1:exon

position:104720:-1
position: 104720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104843:-1
position: 104843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:103732-103927:-1:exon

position:103732:-1
position: 103732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103927:-1
position: 103927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:102923-103018:-1:exon

position:102923:-1
position: 102923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103018:-1
position: 103018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:101706-101846:-1:exon

position:101706:-1
position: 101706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101846:-1
position: 101846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:101071-101213:-1:exon

position:101071:-1
position: 101071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101213:-1
position: 101213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:100705-100804:-1:exon

position:100705:-1
position: 100705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100804:-1
position: 100804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:98939-99100:-1:exon

position:98939:-1
position: 98939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99100:-1
position: 99100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:97092-97247:-1:exon

position:97092:-1
position: 97092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97247:-1
position: 97247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:95329-95556:-1:exon

position:95329:-1
position: 95329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95556:-1
position: 95556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:94483-94557:-1:exon

position:94483:-1
position: 94483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94557:-1
position: 94557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:93819-93902:-1:exon

position:93819:-1
position: 93819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93902:-1
position: 93902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:93074-93182:-1:exon

position:93074:-1
position: 93074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93182:-1
position: 93182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:92495-92673:-1:exon

position:92495:-1
position: 92495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92673:-1
position: 92673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:91704-91830:-1:exon

position:91704:-1
position: 91704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91830:-1
position: 91830
reference: sequence
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type: Messenger RNA
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RO_0002162: 9244
gene: SEC31B
product: SEC31 homolog B, COPII coat complex component, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030453572.1
SIO_010081: SEC31B
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SEC31B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SEC31B
product: SEC31 homolog B, COPII coat complex component, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030453573.1
SIO_010081: SEC31B
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SEC31B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SEC31B
product: SEC31 homolog B, COPII coat complex component, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030453574.1
SIO_010081: SEC31B
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SEC31B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SEC31B
product: SEC31 homolog B, COPII coat complex component, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, 1 long SRA read, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030453571.1
SIO_010081: SEC31B
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urn:…
SIO_000300: 22
SIO_000628: feature:84091-84146:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:82730-82876:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:82231-82347:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:81206-81277:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:79202-80484:-1:exon

SEC31B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SEC31B
product: SEC31 homolog B, COPII coat complex component, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 1 long SRA read, 19 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030453575.1
SIO_010081: SEC31B
subclass of: SO_0000673
so part of: SEC31B
location: complement(join(79202..80484,81206..81277,82231..82347,82730..82876,84091..84146,87893..88216,88571..88784,89437..89625,90212..90385,91122..91267,91704..91830,92495..92673,93074..93182,93819..93902,94483..94557,95329..95556,97092..97247,98939..99100,100705..100804,101071..101213,101706..101846,102923..103018,103732..103927,104720..104843,106440..106528,108776..109084))
location: region:79202-109084:-1
so has part: feature:108776-109084:-1:exon
so has part: feature:106440-106528:-1:exon
so has part: feature:104720-104843:-1:exon
so has part: feature:103732-103927:-1:exon
so has part: feature:102923-103018:-1:exon
so has part: feature:101706-101846:-1:exon
so has part: feature:101071-101213:-1:exon
so has part: feature:100705-100804:-1:exon
so has part: feature:98939-99100:-1:exon
so has part: feature:97092-97247:-1:exon
so has part: feature:95329-95556:-1:exon
so has part: feature:94483-94557:-1:exon
so has part: feature:93819-93902:-1:exon
so has part: feature:93074-93182:-1:exon
so has part: feature:92495-92673:-1:exon
so has part: feature:91704-91830:-1:exon
so has part: feature:91122-91267:-1:exon
so has part: feature:90212-90385:-1:exon
so has part: feature:89437-89625:-1:exon
so has part: feature:88571-88784:-1:exon
so has part: feature:87893-88216:-1:exon
so has part: feature:84091-84146:-1:exon
so has part: feature:82730-82876:-1:exon
so has part: feature:82231-82347:-1:exon
so has part: feature:81206-81277:-1:exon
so has part: feature:79202-80484:-1:exon

position:109084:-1
position: 109084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108776-109084:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106440-106528:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104720-104843:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:103732-103927:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:102923-103018:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:101706-101846:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:101071-101213:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:100705-100804:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:98939-99100:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:97092-97247:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:95329-95556:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:94483-94557:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:93819-93902:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:93074-93182:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:92495-92673:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:91704-91830:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:91122-91267:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:90212-90385:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:89437-89625:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:88571-88784:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:87893-88216:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:84091-84146:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:82730-82876:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:82231-82347:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:81206-81277:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:79202-80484:-1:exon

SEC31B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SEC31B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein transport protein Sec31B isoform X2
translation: MTGGASRAAVFRLPAATVVRAVLRKASGAGRASSAQSSPVRPSPVQSSQRAWKMKLKEIERTAVQAWSPANHHPIYLATGTSAQQLDASFSTNATLEIFEVDFRDPSLDMKQKGTLTASNRFHKLVWGNFGNGSPEPSGVIIGGGDNGVLTMYSAHHILTSKSEPVIGQTEKHSGPVRALDFNPFQSNLLASGANDSEIFIWDLNNFSVPMTPGTKSQPHEDISVVSWNRQVQHILSSAHPSGKAVVWDLRKNEPIIKVSDHSNRMHCSGMAWHPEVATQLVLSSEDDRLPVIQIWDLRFATSPLSQLEKHTRGVLSLSWCQADPELLLSSAKDNRILCWNPSVGEVVYELPIRSQWCFDVQWCPRNPSVFSAATFDGWINIYSVMGGNLEAQQKTQADKISSSFNSLLDPFGTGQILPPLQVPEQVAQTTSIPPLKKPPKWIRRPVGVSFAFGGKLISFGLAKAGQQMQQAHPHQVFISQVTTETEFLLRSRELQMALQSGNLLDYCQGKIQTAKLPFDENLWNFLKVNLEQDSRTKLLRLLGYSKEELQKKIASCLSNGIPDKQPLPEADETSAAQADQLLINSSDDGAAVSTSSTFFDSLIPQNMSTLEIPVTEDTDGLISQALLLGNFEGAVELCMRAERFADAIILAIAGGENLLKETQKRYFAKRQTKLSLLLSSIVQQNWQDIVRTCDLQSWKEALAILLTYSKHEDYTQLCDMLGARLESEGDAALCSDACLCYISSGNVERLVECWVKNHETSSPLALQDLIEKVMVLSRSVEMLQGTAGPAPGPVLAEQITQYASLLASQGCLAAAMSYLPSSSKELPMEQLRDRLFHAQGENVGDQQPPPFPYTRVNVGVIKHTSPAAKGGCAPERTAHKTGPRHPEKPNYQSPFAPSAPPQSSVPSLFTPQPVPAMSGTPHHVASPQAATGPQTGVYSRGPPYPQYNLGLAPATIAGPAVSQSQPFGPVGLGPVGAAPFPSQPSLPGQSMPVTSPSVQPPKPALFNPASVPSSQPPAACPLPMGSQPPMGFTLPFNSPMNIGYPQGGPGAPSTQPLPAASIPPPPTAQESWTDPSAVRGGLQKKKLPEKFTSPAPITAPVMSLPAEPQGINPQLSRLQESGQSPPGAPKEGSLQYHQLPVERVKKKEVPPEHQPLKITYEGLVQRCSAVATDPKTRRKLEDALQRLDCLYEKLREQTLSPTILMGLHEIAHCIEARNYQQGLLVHTQVVSSSSFSEVSGFMPILKVLMTIAGKLNV
SIO_010081: SEC31B
subclass of: SO_0000673
so part of: SEC31B
location: complement(join(80305..80484,81206..81277,82231..82347,82730..82876,84091..84146,87893..88216,88571..88784,89437..89625,90212..90385,91122..91267,91704..91830,92495..92673,93074..93182,93819..93902,94483..94557,95329..95556,97092..97247,98939..99100,100705..100804,101071..101213,101706..101846,102923..103018,103732..103927,104720..104843,106440..106528,109033..109181))
location: region:80305-109181:-1
so has part: feature:109033-109181:-1:exon
so has part: feature:106440-106528:-1:exon
so has part: feature:104720-104843:-1:exon
so has part: feature:103732-103927:-1:exon
so has part: feature:102923-103018:-1:exon
so has part: feature:101706-101846:-1:exon
so has part: feature:101071-101213:-1:exon
so has part: feature:100705-100804:-1:exon
so has part: feature:98939-99100:-1:exon
so has part: feature:97092-97247:-1:exon
so has part: feature:95329-95556:-1:exon
so has part: feature:94483-94557:-1:exon
so has part: feature:93819-93902:-1:exon
so has part: feature:93074-93182:-1:exon
so has part: feature:92495-92673:-1:exon
so has part: feature:91704-91830:-1:exon
so has part: feature:91122-91267:-1:exon
so has part: feature:90212-90385:-1:exon
so has part: feature:89437-89625:-1:exon
so has part: feature:88571-88784:-1:exon
so has part: feature:87893-88216:-1:exon
so has part: feature:84091-84146:-1:exon
so has part: feature:82730-82876:-1:exon
so has part: feature:82231-82347:-1:exon
so has part: feature:81206-81277:-1:exon
so has part: feature:80305-80484:-1:exon

XP_030309431.1
type: Protein
SIO_000068: ncbiprotein

position:80305:-1
position: 80305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109181:-1
position: 109181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109033-109181:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106440-106528:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104720-104843:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:103732-103927:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:102923-103018:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:101706-101846:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:101071-101213:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:100705-100804:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:98939-99100:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:97092-97247:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:95329-95556:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:94483-94557:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:93819-93902:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:93074-93182:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:92495-92673:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:91704-91830:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:91122-91267:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:90212-90385:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:89437-89625:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:88571-88784:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:87893-88216:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:84091-84146:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:82730-82876:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:82231-82347:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:81206-81277:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:80305-80484:-1:exon

SEC31B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SEC31B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein transport protein Sec31B isoform X1
translation: MTGGASRAAVFRLPAATVVRAVLRKASGAGRASSAQSSPVRPSPVQSSQRAWKMKLKEIERTAVQAWSPANHHPIYLATGTSAQQLDASFSTNATLEIFEVDFRDPSLDMKQKGTLTASNRFHKLVWGNFGNGSPEPSGVIIGGGDNGVLTMYSAHHILTSKSEPVIGQTEKHSGPVRALDFNPFQSNLLASGANDSEIFIWDLNNFSVPMTPGTKSQPHEDISVVSWNRQVQHILSSAHPSGKAVVWDLRKNEPIIKVSDHSNRMHCSGMAWHPEVATQLVLSSEDDRLPVIQIWDLRFATSPLSQLEKHTRGVLSLSWCQADPELLLSSAKDNRILCWNPSVGEVVYELPIRSQWCFDVQWCPRNPSVFSAATFDGWINIYSVMGGNLEAQQKTQADKISSSFNSLLDPFGTGQILPPLQVPEQVAQTTSIPPLKKPPKWIRRPVGVSFAFGGKLISFGLAKAGQQMQQAHPHQVFISQVTTETEFLLRSRELQMALQSGNLLDYCQGKIQTAKLPFDENLWNFLKVNLEQDSRTKLLRLLGYSKEELQKKIASCLSNGIPDKQPLPEADETSAAQADQLLINSSDDGAAVSTSSTFFDSLIPQNMSTLEIPVTEDTDGLISQALLLGNFEGAVELCMRAERFADAIILAIAGGENLLKETQKRYFAKRQTKLSLLLSSIVQQNWQDIVRTCDLQSWKEALAILLTYSKHEDYTQLCDMLGARLESEGDAALCSDACLCYISSGNVERLVECWVKNHETSSPLALQVQDLIEKVMVLSRSVEMLQGTAGPAPGPVLAEQITQYASLLASQGCLAAAMSYLPSSSKELPMEQLRDRLFHAQGENVGDQQPPPFPYTRVNVGVIKHTSPAAKGGCAPERTAHKTGPRHPEKPNYQSPFAPSAPPQSSVPSLFTPQPVPAMSGTPHHVASPQAATGPQTGVYSRGPPYPQYNLGLAPATIAGPAVSQSQPFGPVGLGPVGAAPFPSQPSLPGQSMPVTSPSVQPPKPALFNPASVPSSQPPAACPLPMGSQPPMGFTLPFNSPMNIGYPQGGPGAPSTQPLPAASIPPPPTAQESWTDPSAVRGGLQKKKLPEKFTSPAPITAPVMSLPAEPQGINPQLSRLQESGQSPPGAPKEGSLQYHQLPVERVKKKEVPPEHQPLKITYEGLVQRCSAVATDPKTRRKLEDALQRLDCLYEKLREQTLSPTILMGLHEIAHCIEARNYQQGLLVHTQVVSSSSFSEVSGFMPILKVLMTIAGKLNV
SIO_010081: SEC31B
subclass of: SO_0000673
so part of: SEC31B
location: complement(join(80305..80484,81206..81277,82231..82347,82730..82876,84091..84146,87893..88216,88571..88784,89437..89625,90212..90385,91116..91267,91704..91830,92495..92673,93074..93182,93819..93902,94483..94557,95329..95556,97092..97247,98939..99100,100705..100804,101071..101213,101706..101846,102923..103018,103732..103927,104720..104843,106440..106528,109033..109181))
location: region:80305-109181:-1
so has part: feature:109033-109181:-1:exon
so has part: feature:106440-106528:-1:exon
so has part: feature:104720-104843:-1:exon
so has part: feature:103732-103927:-1:exon
so has part: feature:102923-103018:-1:exon
so has part: feature:101706-101846:-1:exon
so has part: feature:101071-101213:-1:exon
so has part: feature:100705-100804:-1:exon
so has part: feature:98939-99100:-1:exon
so has part: feature:97092-97247:-1:exon
so has part: feature:95329-95556:-1:exon
so has part: feature:94483-94557:-1:exon
so has part: feature:93819-93902:-1:exon
so has part: feature:93074-93182:-1:exon
so has part: feature:92495-92673:-1:exon
so has part: feature:91704-91830:-1:exon
so has part: feature:91116-91267:-1:exon
so has part: feature:90212-90385:-1:exon
so has part: feature:89437-89625:-1:exon
so has part: feature:88571-88784:-1:exon
so has part: feature:87893-88216:-1:exon
so has part: feature:84091-84146:-1:exon
so has part: feature:82730-82876:-1:exon
so has part: feature:82231-82347:-1:exon
so has part: feature:81206-81277:-1:exon
so has part: feature:80305-80484:-1:exon

XP_030309430.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109033-109181:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106440-106528:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104720-104843:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:103732-103927:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:102923-103018:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:101706-101846:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:101071-101213:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:100705-100804:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:98939-99100:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:97092-97247:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:95329-95556:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:94483-94557:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:93819-93902:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:93074-93182:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:92495-92673:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:91704-91830:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:91116-91267:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:90212-90385:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:89437-89625:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:88571-88784:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:87893-88216:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:84091-84146:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:82730-82876:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:82231-82347:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:81206-81277:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:80305-80484:-1:exon

SEC31B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SEC31B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein transport protein Sec31B isoform X4
translation: MKLKEIERTAVQAWSPANHHPIYLATGTSAQQLDASFSTNATLEIFEVDFRDPSLDMKQKGTLTASNRFHKLVWGNFGNGSPEPSGVIIGGGDNGVLTMYSAHHILTSKSEPVIGQTEKHSGPVRALDFNPFQSNLLASGANDSEIFIWDLNNFSVPMTPGTKSQPHEDISVVSWNRQVQHILSSAHPSGKAVVWDLRKNEPIIKVSDHSNRMHCSGMAWHPEVATQLVLSSEDDRLPVIQIWDLRFATSPLSQLEKHTRGVLSLSWCQADPELLLSSAKDNRILCWNPSVGEVVYELPIRSQWCFDVQWCPRNPSVFSAATFDGWINIYSVMGGNLEAQQKTQADKISSSFNSLLDPFGTGQILPPLQVPEQVAQTTSIPPLKKPPKWIRRPVGVSFAFGGKLISFGLAKAGQQMQQAHPHQVFISQVTTETEFLLRSRELQMALQSGNLLDYCQGKIQTAKLPFDENLWNFLKVNLEQDSRTKLLRLLGYSKEELQKKIASCLSNGIPDKQPLPEADETSAAQADQLLINSSDDGAAVSTSSTFFDSLIPQNMSTLEIPVTEDTDGLISQALLLGNFEGAVELCMRAERFADAIILAIAGGENLLKETQKRYFAKRQTKLSLLLSSIVQQNWQDIVRTCDLQSWKEALAILLTYSKHEDYTQLCDMLGARLESEGDAALCSDACLCYISSGNVERLVECWVKNHETSSPLALQDLIEKVMVLSRSVEMLQGTAGPAPGPVLAEQITQYASLLASQGCLAAAMSYLPSSSKELPMEQLRDRLFHAQGENVGDQQPPPFPYTRVNVGVIKHTSPAAKGGCAPERTAHKTGPRHPEKPNYQSPFAPSAPPQSSVPSLFTPQPVPAMSGTPHHVASPQAATGPQTGVYSRGPPYPQYNLGLAPATIAGPAVSQSQPFGPVGLGPVGAAPFPSQPSLPGQSMPVTSPSVQPPKPALFNPASVPSSQPPAACPLPMGSQPPMGFTLPFNSPMNIGYPQGGPGAPSTQPLPAASIPPPPTAQESWTDPSAVRGGLQKKKLPEKFTSPAPITAPVMSLPAEPQGINPQLSRLQESGQSPPGAPKEGSLQYHQLPVERVKKKEVPPEHQPLKITYEGLVQRCSAVATDPKTRRKLEDALQRLDCLYEKLREQTLSPTILMGLHEIAHCIEARNYQQGLLVHTQVVSSSSFSEVSGFMPILKVLMTIAGKLNV
SIO_010081: SEC31B
subclass of: SO_0000673
so part of: SEC31B
location: complement(join(80305..80484,81206..81277,82231..82347,82730..82876,84091..84146,87893..88216,88571..88784,89437..89625,90212..90385,91122..91267,91704..91830,92495..92673,93074..93182,93819..93902,94483..94557,95329..95556,97092..97247,98939..99100,100705..100804,101071..101213,101706..101846,102923..103018,103732..103927,104720..104843,106440..106518))
location: region:80305-106518:-1
so has part: feature:106440-106518:-1:exon
so has part: feature:104720-104843:-1:exon
so has part: feature:103732-103927:-1:exon
so has part: feature:102923-103018:-1:exon
so has part: feature:101706-101846:-1:exon
so has part: feature:101071-101213:-1:exon
so has part: feature:100705-100804:-1:exon
so has part: feature:98939-99100:-1:exon
so has part: feature:97092-97247:-1:exon
so has part: feature:95329-95556:-1:exon
so has part: feature:94483-94557:-1:exon
so has part: feature:93819-93902:-1:exon
so has part: feature:93074-93182:-1:exon
so has part: feature:92495-92673:-1:exon
so has part: feature:91704-91830:-1:exon
so has part: feature:91122-91267:-1:exon
so has part: feature:90212-90385:-1:exon
so has part: feature:89437-89625:-1:exon
so has part: feature:88571-88784:-1:exon
so has part: feature:87893-88216:-1:exon
so has part: feature:84091-84146:-1:exon
so has part: feature:82730-82876:-1:exon
so has part: feature:82231-82347:-1:exon
so has part: feature:81206-81277:-1:exon
so has part: feature:80305-80484:-1:exon

XP_030309435.1
type: Protein
SIO_000068: ncbiprotein

position:106518:-1
position: 106518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106440-106518:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104720-104843:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:103732-103927:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:102923-103018:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:101706-101846:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:101071-101213:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:100705-100804:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:98939-99100:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:97092-97247:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:95329-95556:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:94483-94557:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:93819-93902:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:93074-93182:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:92495-92673:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:91704-91830:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:91122-91267:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:90212-90385:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:89437-89625:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:88571-88784:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:87893-88216:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:84091-84146:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:82730-82876:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:82231-82347:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:81206-81277:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:80305-80484:-1:exon

SEC31B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SEC31B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein transport protein Sec31B isoform X3
translation: MKLKEIERTAVQAWSPANHHPIYLATGTSAQQLDASFSTNATLEIFEVDFRDPSLDMKQKGTLTASNRFHKLVWGNFGNGSPEPSGVIIGGGDNGVLTMYSAHHILTSKSEPVIGQTEKHSGPVRALDFNPFQSNLLASGANDSEIFIWDLNNFSVPMTPGTKSQPHEDISVVSWNRQVQHILSSAHPSGKAVVWDLRKNEPIIKVSDHSNRMHCSGMAWHPEVATQLVLSSEDDRLPVIQIWDLRFATSPLSQLEKHTRGVLSLSWCQADPELLLSSAKDNRILCWNPSVGEVVYELPIRSQWCFDVQWCPRNPSVFSAATFDGWINIYSVMGGNLEAQQKTQADKISSSFNSLLDPFGTGQILPPLQVPEQVAQTTSIPPLKKPPKWIRRPVGVSFAFGGKLISFGLAKAGQQMQQAHPHQVFISQVTTETEFLLRSRELQMALQSGNLLDYCQGKIQTAKLPFDENLWNFLKVNLEQDSRTKLLRLLGYSKEELQKKIASCLSNGIPDKQPLPEADETSAAQADQLLINSSDDGAAVSTSSTFFDSLIPQNMSTLEIPVTEDTDGLISQALLLGNFEGAVELCMRAERFADAIILAIAGGENLLKETQKRYFAKRQTKLSLLLSSIVQQNWQDIVRTCDLQSWKEALAILLTYSKHEDYTQLCDMLGARLESEGDAALCSDACLCYISSGNVERLVECWVKNHETSSPLALQVQDLIEKVMVLSRSVEMLQGTAGPAPGPVLAEQITQYASLLASQGCLAAAMSYLPSSSKELPMEQLRDRLFHAQGENVGDQQPPPFPYTRVNVGVIKHTSPAAKGGCAPERTAHKTGPRHPEKPNYQSPFAPSAPPQSSVPSLFTPQPVPAMSGTPHHVASPQAATGPQTGVYSRGPPYPQYNLGLAPATIAGPAVSQSQPFGPVGLGPVGAAPFPSQPSLPGQSMPVTSPSVQPPKPALFNPASVPSSQPPAACPLPMGSQPPMGFTLPFNSPMNIGYPQGGPGAPSTQPLPAASIPPPPTAQESWTDPSAVRGGLQKKKLPEKFTSPAPITAPVMSLPAEPQGINPQLSRLQESGQSPPGAPKEGSLQYHQLPVERVKKKEVPPEHQPLKITYEGLVQRCSAVATDPKTRRKLEDALQRLDCLYEKLREQTLSPTILMGLHEIAHCIEARNYQQGLLVHTQVVSSSSFSEVSGFMPILKVLMTIAGKLNV
SIO_010081: SEC31B
subclass of: SO_0000673
so part of: SEC31B
location: complement(join(80305..80484,81206..81277,82231..82347,82730..82876,84091..84146,87893..88216,88571..88784,89437..89625,90212..90385,91116..91267,91704..91830,92495..92673,93074..93182,93819..93902,94483..94557,95329..95556,97092..97247,98939..99100,100705..100804,101071..101213,101706..101846,102923..103018,103732..103927,104720..104843,106440..106518))
location: region:80305-106518:-1
so has part: feature:106440-106518:-1:exon
so has part: feature:104720-104843:-1:exon
so has part: feature:103732-103927:-1:exon
so has part: feature:102923-103018:-1:exon
so has part: feature:101706-101846:-1:exon
so has part: feature:101071-101213:-1:exon
so has part: feature:100705-100804:-1:exon
so has part: feature:98939-99100:-1:exon
so has part: feature:97092-97247:-1:exon
so has part: feature:95329-95556:-1:exon
so has part: feature:94483-94557:-1:exon
so has part: feature:93819-93902:-1:exon
so has part: feature:93074-93182:-1:exon
so has part: feature:92495-92673:-1:exon
so has part: feature:91704-91830:-1:exon
so has part: feature:91116-91267:-1:exon
so has part: feature:90212-90385:-1:exon
so has part: feature:89437-89625:-1:exon
so has part: feature:88571-88784:-1:exon
so has part: feature:87893-88216:-1:exon
so has part: feature:84091-84146:-1:exon
so has part: feature:82730-82876:-1:exon
so has part: feature:82231-82347:-1:exon
so has part: feature:81206-81277:-1:exon
so has part: feature:80305-80484:-1:exon

XP_030309432.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106440-106518:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104720-104843:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:103732-103927:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:102923-103018:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:101706-101846:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:101071-101213:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:100705-100804:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:98939-99100:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:97092-97247:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:95329-95556:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:94483-94557:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:93819-93902:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:93074-93182:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:92495-92673:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:91704-91830:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:91116-91267:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:90212-90385:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:89437-89625:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:88571-88784:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:87893-88216:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:84091-84146:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:82730-82876:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:82231-82347:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:81206-81277:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:80305-80484:-1:exon

SEC31B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SEC31B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein transport protein Sec31B isoform X3
translation: MKLKEIERTAVQAWSPANHHPIYLATGTSAQQLDASFSTNATLEIFEVDFRDPSLDMKQKGTLTASNRFHKLVWGNFGNGSPEPSGVIIGGGDNGVLTMYSAHHILTSKSEPVIGQTEKHSGPVRALDFNPFQSNLLASGANDSEIFIWDLNNFSVPMTPGTKSQPHEDISVVSWNRQVQHILSSAHPSGKAVVWDLRKNEPIIKVSDHSNRMHCSGMAWHPEVATQLVLSSEDDRLPVIQIWDLRFATSPLSQLEKHTRGVLSLSWCQADPELLLSSAKDNRILCWNPSVGEVVYELPIRSQWCFDVQWCPRNPSVFSAATFDGWINIYSVMGGNLEAQQKTQADKISSSFNSLLDPFGTGQILPPLQVPEQVAQTTSIPPLKKPPKWIRRPVGVSFAFGGKLISFGLAKAGQQMQQAHPHQVFISQVTTETEFLLRSRELQMALQSGNLLDYCQGKIQTAKLPFDENLWNFLKVNLEQDSRTKLLRLLGYSKEELQKKIASCLSNGIPDKQPLPEADETSAAQADQLLINSSDDGAAVSTSSTFFDSLIPQNMSTLEIPVTEDTDGLISQALLLGNFEGAVELCMRAERFADAIILAIAGGENLLKETQKRYFAKRQTKLSLLLSSIVQQNWQDIVRTCDLQSWKEALAILLTYSKHEDYTQLCDMLGARLESEGDAALCSDACLCYISSGNVERLVECWVKNHETSSPLALQVQDLIEKVMVLSRSVEMLQGTAGPAPGPVLAEQITQYASLLASQGCLAAAMSYLPSSSKELPMEQLRDRLFHAQGENVGDQQPPPFPYTRVNVGVIKHTSPAAKGGCAPERTAHKTGPRHPEKPNYQSPFAPSAPPQSSVPSLFTPQPVPAMSGTPHHVASPQAATGPQTGVYSRGPPYPQYNLGLAPATIAGPAVSQSQPFGPVGLGPVGAAPFPSQPSLPGQSMPVTSPSVQPPKPALFNPASVPSSQPPAACPLPMGSQPPMGFTLPFNSPMNIGYPQGGPGAPSTQPLPAASIPPPPTAQESWTDPSAVRGGLQKKKLPEKFTSPAPITAPVMSLPAEPQGINPQLSRLQESGQSPPGAPKEGSLQYHQLPVERVKKKEVPPEHQPLKITYEGLVQRCSAVATDPKTRRKLEDALQRLDCLYEKLREQTLSPTILMGLHEIAHCIEARNYQQGLLVHTQVVSSSSFSEVSGFMPILKVLMTIAGKLNV
SIO_010081: SEC31B
subclass of: SO_0000673
so part of: SEC31B
location: complement(join(80305..80484,81206..81277,82231..82347,82730..82876,84091..84146,87893..88216,88571..88784,89437..89625,90212..90385,91116..91267,91704..91830,92495..92673,93074..93182,93819..93902,94483..94557,95329..95556,97092..97247,98939..99100,100705..100804,101071..101213,101706..101846,102923..103018,103732..103927,104720..104843,106440..106518))
location: region:80305-106518:-1
so has part: feature:106440-106518:-1:exon
so has part: feature:104720-104843:-1:exon
so has part: feature:103732-103927:-1:exon
so has part: feature:102923-103018:-1:exon
so has part: feature:101706-101846:-1:exon
so has part: feature:101071-101213:-1:exon
so has part: feature:100705-100804:-1:exon
so has part: feature:98939-99100:-1:exon
so has part: feature:97092-97247:-1:exon
so has part: feature:95329-95556:-1:exon
so has part: feature:94483-94557:-1:exon
so has part: feature:93819-93902:-1:exon
so has part: feature:93074-93182:-1:exon
so has part: feature:92495-92673:-1:exon
so has part: feature:91704-91830:-1:exon
so has part: feature:91116-91267:-1:exon
so has part: feature:90212-90385:-1:exon
so has part: feature:89437-89625:-1:exon
so has part: feature:88571-88784:-1:exon
so has part: feature:87893-88216:-1:exon
so has part: feature:84091-84146:-1:exon
so has part: feature:82730-82876:-1:exon
so has part: feature:82231-82347:-1:exon
so has part: feature:81206-81277:-1:exon
so has part: feature:80305-80484:-1:exon

XP_030309433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106440-106518:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104720-104843:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:103732-103927:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:102923-103018:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:101706-101846:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:101071-101213:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:100705-100804:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:98939-99100:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:97092-97247:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:95329-95556:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:94483-94557:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:93819-93902:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:93074-93182:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:92495-92673:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:91704-91830:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:91116-91267:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:90212-90385:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:89437-89625:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:88571-88784:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:87893-88216:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:84091-84146:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:82730-82876:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:82231-82347:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:81206-81277:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:80305-80484:-1:exon

SEC31B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SEC31B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein transport protein Sec31B isoform X3
translation: MKLKEIERTAVQAWSPANHHPIYLATGTSAQQLDASFSTNATLEIFEVDFRDPSLDMKQKGTLTASNRFHKLVWGNFGNGSPEPSGVIIGGGDNGVLTMYSAHHILTSKSEPVIGQTEKHSGPVRALDFNPFQSNLLASGANDSEIFIWDLNNFSVPMTPGTKSQPHEDISVVSWNRQVQHILSSAHPSGKAVVWDLRKNEPIIKVSDHSNRMHCSGMAWHPEVATQLVLSSEDDRLPVIQIWDLRFATSPLSQLEKHTRGVLSLSWCQADPELLLSSAKDNRILCWNPSVGEVVYELPIRSQWCFDVQWCPRNPSVFSAATFDGWINIYSVMGGNLEAQQKTQADKISSSFNSLLDPFGTGQILPPLQVPEQVAQTTSIPPLKKPPKWIRRPVGVSFAFGGKLISFGLAKAGQQMQQAHPHQVFISQVTTETEFLLRSRELQMALQSGNLLDYCQGKIQTAKLPFDENLWNFLKVNLEQDSRTKLLRLLGYSKEELQKKIASCLSNGIPDKQPLPEADETSAAQADQLLINSSDDGAAVSTSSTFFDSLIPQNMSTLEIPVTEDTDGLISQALLLGNFEGAVELCMRAERFADAIILAIAGGENLLKETQKRYFAKRQTKLSLLLSSIVQQNWQDIVRTCDLQSWKEALAILLTYSKHEDYTQLCDMLGARLESEGDAALCSDACLCYISSGNVERLVECWVKNHETSSPLALQVQDLIEKVMVLSRSVEMLQGTAGPAPGPVLAEQITQYASLLASQGCLAAAMSYLPSSSKELPMEQLRDRLFHAQGENVGDQQPPPFPYTRVNVGVIKHTSPAAKGGCAPERTAHKTGPRHPEKPNYQSPFAPSAPPQSSVPSLFTPQPVPAMSGTPHHVASPQAATGPQTGVYSRGPPYPQYNLGLAPATIAGPAVSQSQPFGPVGLGPVGAAPFPSQPSLPGQSMPVTSPSVQPPKPALFNPASVPSSQPPAACPLPMGSQPPMGFTLPFNSPMNIGYPQGGPGAPSTQPLPAASIPPPPTAQESWTDPSAVRGGLQKKKLPEKFTSPAPITAPVMSLPAEPQGINPQLSRLQESGQSPPGAPKEGSLQYHQLPVERVKKKEVPPEHQPLKITYEGLVQRCSAVATDPKTRRKLEDALQRLDCLYEKLREQTLSPTILMGLHEIAHCIEARNYQQGLLVHTQVVSSSSFSEVSGFMPILKVLMTIAGKLNV
SIO_010081: SEC31B
subclass of: SO_0000673
so part of: SEC31B
location: complement(join(80305..80484,81206..81277,82231..82347,82730..82876,84091..84146,87893..88216,88571..88784,89437..89625,90212..90385,91116..91267,91704..91830,92495..92673,93074..93182,93819..93902,94483..94557,95329..95556,97092..97247,98939..99100,100705..100804,101071..101213,101706..101846,102923..103018,103732..103927,104720..104843,106440..106518))
location: region:80305-106518:-1
so has part: feature:106440-106518:-1:exon
so has part: feature:104720-104843:-1:exon
so has part: feature:103732-103927:-1:exon
so has part: feature:102923-103018:-1:exon
so has part: feature:101706-101846:-1:exon
so has part: feature:101071-101213:-1:exon
so has part: feature:100705-100804:-1:exon
so has part: feature:98939-99100:-1:exon
so has part: feature:97092-97247:-1:exon
so has part: feature:95329-95556:-1:exon
so has part: feature:94483-94557:-1:exon
so has part: feature:93819-93902:-1:exon
so has part: feature:93074-93182:-1:exon
so has part: feature:92495-92673:-1:exon
so has part: feature:91704-91830:-1:exon
so has part: feature:91116-91267:-1:exon
so has part: feature:90212-90385:-1:exon
so has part: feature:89437-89625:-1:exon
so has part: feature:88571-88784:-1:exon
so has part: feature:87893-88216:-1:exon
so has part: feature:84091-84146:-1:exon
so has part: feature:82730-82876:-1:exon
so has part: feature:82231-82347:-1:exon
so has part: feature:81206-81277:-1:exon
so has part: feature:80305-80484:-1:exon

XP_030309434.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106440-106518:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104720-104843:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:103732-103927:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:102923-103018:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:101706-101846:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:101071-101213:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:100705-100804:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:98939-99100:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:97092-97247:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:95329-95556:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:94483-94557:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:93819-93902:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:93074-93182:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:92495-92673:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:91704-91830:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:91116-91267:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:90212-90385:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:89437-89625:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:88571-88784:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:87893-88216:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:84091-84146:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:82730-82876:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:82231-82347:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:81206-81277:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:80305-80484:-1:exon

SEC31B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SEC31B
product: SEC31 homolog B, COPII coat complex component, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030453576.1
SIO_010081: SEC31B
subclass of: SO_0000673
so part of: SEC31B
location: complement(join(85930..86911,87893..88216,88571..88784,89437..89625,90212..90385,91116..91267,91704..91830,92495..92673,93074..93182,93819..93902,94483..94557,95329..95556,97092..97247,98939..99100,100705..100804,101071..101213,101706..101846,102923..103018,103732..103927,104720..104843,106440..106528,109033..109196))
location: region:85930-109196:-1
so has part: feature:109033-109196:-1:exon
so has part: feature:106440-106528:-1:exon
so has part: feature:104720-104843:-1:exon
so has part: feature:103732-103927:-1:exon
so has part: feature:102923-103018:-1:exon
so has part: feature:101706-101846:-1:exon
so has part: feature:101071-101213:-1:exon
so has part: feature:100705-100804:-1:exon
so has part: feature:98939-99100:-1:exon
so has part: feature:97092-97247:-1:exon
so has part: feature:95329-95556:-1:exon
so has part: feature:94483-94557:-1:exon
so has part: feature:93819-93902:-1:exon
so has part: feature:93074-93182:-1:exon
so has part: feature:92495-92673:-1:exon
so has part: feature:91704-91830:-1:exon
so has part: feature:91116-91267:-1:exon
so has part: feature:90212-90385:-1:exon
so has part: feature:89437-89625:-1:exon
so has part: feature:88571-88784:-1:exon
so has part: feature:87893-88216:-1:exon
so has part: feature:85930-86911:-1:exon

position:85930:-1
position: 85930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109033-109196:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106440-106528:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104720-104843:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:103732-103927:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:102923-103018:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:101706-101846:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:101071-101213:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:100705-100804:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:98939-99100:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:97092-97247:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:95329-95556:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:94483-94557:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:93819-93902:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:93074-93182:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:92495-92673:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:91704-91830:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:91116-91267:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:90212-90385:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:89437-89625:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:88571-88784:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:87893-88216:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:85930-86911:-1:exon

position:86911:-1
position: 86911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SEC31B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SEC31B
product: SEC31 homolog B, COPII coat complex component, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030453577.1
SIO_010081: SEC31B
subclass of: SO_0000673
so part of: SEC31B
location: complement(join(86175..86911,87893..88216,88571..88784,89437..89625,90212..90385,91122..91267,91704..91830,92495..92673,93074..93182,93819..93902,94483..94557,95329..95556,97092..97247,98939..99100,100705..100804,101071..101213,101706..101846,102923..103018,103732..103927,104720..104843,106440..106528,109033..109195))
location: region:86175-109195:-1
so has part: feature:109033-109195:-1:exon
so has part: feature:106440-106528:-1:exon
so has part: feature:104720-104843:-1:exon
so has part: feature:103732-103927:-1:exon
so has part: feature:102923-103018:-1:exon
so has part: feature:101706-101846:-1:exon
so has part: feature:101071-101213:-1:exon
so has part: feature:100705-100804:-1:exon
so has part: feature:98939-99100:-1:exon
so has part: feature:97092-97247:-1:exon
so has part: feature:95329-95556:-1:exon
so has part: feature:94483-94557:-1:exon
so has part: feature:93819-93902:-1:exon
so has part: feature:93074-93182:-1:exon
so has part: feature:92495-92673:-1:exon
so has part: feature:91704-91830:-1:exon
so has part: feature:91122-91267:-1:exon
so has part: feature:90212-90385:-1:exon
so has part: feature:89437-89625:-1:exon
so has part: feature:88571-88784:-1:exon
so has part: feature:87893-88216:-1:exon
so has part: feature:86175-86911:-1:exon

position:86175:-1
position: 86175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109195:-1
position: 109195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109033-109195:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106440-106528:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104720-104843:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:103732-103927:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:102923-103018:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:101706-101846:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:101071-101213:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:100705-100804:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:98939-99100:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:97092-97247:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:95329-95556:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:94483-94557:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:93819-93902:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:93074-93182:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:92495-92673:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:91704-91830:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:91122-91267:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:90212-90385:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:89437-89625:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:88571-88784:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:87893-88216:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:86175-86911:-1:exon

SEC31B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SEC31B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein transport protein Sec31B isoform X6
translation: MTGGASRAAVFRLPAATVVRAVLRKASGAGRASSAQSSPVRPSPVQSSQRAWKMKLKEIERTAVQAWSPANHHPIYLATGTSAQQLDASFSTNATLEIFEVDFRDPSLDMKQKGTLTASNRFHKLVWGNFGNGSPEPSGVIIGGGDNGVLTMYSAHHILTSKSEPVIGQTEKHSGPVRALDFNPFQSNLLASGANDSEIFIWDLNNFSVPMTPGTKSQPHEDISVVSWNRQVQHILSSAHPSGKAVVWDLRKNEPIIKVSDHSNRMHCSGMAWHPEVATQLVLSSEDDRLPVIQIWDLRFATSPLSQLEKHTRGVLSLSWCQADPELLLSSAKDNRILCWNPSVGEVVYELPIRSQWCFDVQWCPRNPSVFSAATFDGWINIYSVMGGNLEAQQKTQADKISSSFNSLLDPFGTGQILPPLQVPEQVAQTTSIPPLKKPPKWIRRPVGVSFAFGGKLISFGLAKAGQQMQQAHPHQVFISQVTTETEFLLRSRELQMALQSGNLLDYCQGKIQTAKLPFDENLWNFLKVNLEQDSRTKLLRLLGYSKEELQKKIASCLSNGIPDKQPLPEADETSAAQADQLLINSSDDGAAVSTSSTFFDSLIPQNMSTLEIPVTEDTDGLISQALLLGNFEGAVELCMRAERFADAIILAIAGGENLLKETQKRYFAKRQTKLSLLLSSIVQQNWQDIVRTCDLQSWKEALAILLTYSKHEDYTQLCDMLGARLESEGDAALCSDACLCYISSGNVERLVECWVKNHETSSPLALQDLIEKVMVLSRSVEMLQGTAGPAPGPVLAEQITQYASLLASQGCLAAAMSYLPSSSKELPMEQLRDRLFHAQGENVGDQQPPPFPYTRVNVGVIKHTSPAAKGGCAPERTAHKTGPRHPEKPNYQSPFAPSAPPQSSVPSLFTPQPVPAMSGTPHHVASPQAATGPQTGVYSRGPPYPQYNLGLAPATIAGPAVSQSQPFGPVGLGPVGAAPFPSQPSLPGQSMPVTSPSVQPPKPALFNPASVPSSQPPAACPLPMGSQPPMGFTLPFNSPMNIGYPQGGPGAPSTQPLPAASIPPPPTGFFPWLDPHVDHAGSTQRSLQTRGGGNVAASSELWGVCARFTVCMLIAVCGFLAFLGSCMAGVVDVCVPRMSK
SIO_010081: SEC31B
subclass of: SO_0000673
so part of: SEC31B
location: complement(join(86691..86911,87893..88216,88571..88784,89437..89625,90212..90385,91122..91267,91704..91830,92495..92673,93074..93182,93819..93902,94483..94557,95329..95556,97092..97247,98939..99100,100705..100804,101071..101213,101706..101846,102923..103018,103732..103927,104720..104843,106440..106528,109033..109181))
location: region:86691-109181:-1
so has part: feature:109033-109181:-1:exon
so has part: feature:106440-106528:-1:exon
so has part: feature:104720-104843:-1:exon
so has part: feature:103732-103927:-1:exon
so has part: feature:102923-103018:-1:exon
so has part: feature:101706-101846:-1:exon
so has part: feature:101071-101213:-1:exon
so has part: feature:100705-100804:-1:exon
so has part: feature:98939-99100:-1:exon
so has part: feature:97092-97247:-1:exon
so has part: feature:95329-95556:-1:exon
so has part: feature:94483-94557:-1:exon
so has part: feature:93819-93902:-1:exon
so has part: feature:93074-93182:-1:exon
so has part: feature:92495-92673:-1:exon
so has part: feature:91704-91830:-1:exon
so has part: feature:91122-91267:-1:exon
so has part: feature:90212-90385:-1:exon
so has part: feature:89437-89625:-1:exon
so has part: feature:88571-88784:-1:exon
so has part: feature:87893-88216:-1:exon
so has part: feature:86691-86911:-1:exon

XP_030309437.1
type: Protein
SIO_000068: ncbiprotein

position:86691:-1
position: 86691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109033-109181:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106440-106528:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104720-104843:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:103732-103927:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:102923-103018:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:101706-101846:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:101071-101213:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:100705-100804:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:98939-99100:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:97092-97247:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:95329-95556:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:94483-94557:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:93819-93902:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:93074-93182:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:92495-92673:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:91704-91830:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:91122-91267:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:90212-90385:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:89437-89625:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:88571-88784:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:87893-88216:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:86691-86911:-1:exon

SEC31B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SEC31B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein transport protein Sec31B isoform X5
translation: MTGGASRAAVFRLPAATVVRAVLRKASGAGRASSAQSSPVRPSPVQSSQRAWKMKLKEIERTAVQAWSPANHHPIYLATGTSAQQLDASFSTNATLEIFEVDFRDPSLDMKQKGTLTASNRFHKLVWGNFGNGSPEPSGVIIGGGDNGVLTMYSAHHILTSKSEPVIGQTEKHSGPVRALDFNPFQSNLLASGANDSEIFIWDLNNFSVPMTPGTKSQPHEDISVVSWNRQVQHILSSAHPSGKAVVWDLRKNEPIIKVSDHSNRMHCSGMAWHPEVATQLVLSSEDDRLPVIQIWDLRFATSPLSQLEKHTRGVLSLSWCQADPELLLSSAKDNRILCWNPSVGEVVYELPIRSQWCFDVQWCPRNPSVFSAATFDGWINIYSVMGGNLEAQQKTQADKISSSFNSLLDPFGTGQILPPLQVPEQVAQTTSIPPLKKPPKWIRRPVGVSFAFGGKLISFGLAKAGQQMQQAHPHQVFISQVTTETEFLLRSRELQMALQSGNLLDYCQGKIQTAKLPFDENLWNFLKVNLEQDSRTKLLRLLGYSKEELQKKIASCLSNGIPDKQPLPEADETSAAQADQLLINSSDDGAAVSTSSTFFDSLIPQNMSTLEIPVTEDTDGLISQALLLGNFEGAVELCMRAERFADAIILAIAGGENLLKETQKRYFAKRQTKLSLLLSSIVQQNWQDIVRTCDLQSWKEALAILLTYSKHEDYTQLCDMLGARLESEGDAALCSDACLCYISSGNVERLVECWVKNHETSSPLALQVQDLIEKVMVLSRSVEMLQGTAGPAPGPVLAEQITQYASLLASQGCLAAAMSYLPSSSKELPMEQLRDRLFHAQGENVGDQQPPPFPYTRVNVGVIKHTSPAAKGGCAPERTAHKTGPRHPEKPNYQSPFAPSAPPQSSVPSLFTPQPVPAMSGTPHHVASPQAATGPQTGVYSRGPPYPQYNLGLAPATIAGPAVSQSQPFGPVGLGPVGAAPFPSQPSLPGQSMPVTSPSVQPPKPALFNPASVPSSQPPAACPLPMGSQPPMGFTLPFNSPMNIGYPQGGPGAPSTQPLPAASIPPPPTGFFPWLDPHVDHAGSTQRSLQTRGGGNVAASSELWGVCARFTVCMLIAVCGFLAFLGSCMAGVVDVCVPRMSK
SIO_010081: SEC31B
subclass of: SO_0000673
so part of: SEC31B
location: complement(join(86691..86911,87893..88216,88571..88784,89437..89625,90212..90385,91116..91267,91704..91830,92495..92673,93074..93182,93819..93902,94483..94557,95329..95556,97092..97247,98939..99100,100705..100804,101071..101213,101706..101846,102923..103018,103732..103927,104720..104843,106440..106528,109033..109181))
location: region:86691-109181:-1
so has part: feature:109033-109181:-1:exon
so has part: feature:106440-106528:-1:exon
so has part: feature:104720-104843:-1:exon
so has part: feature:103732-103927:-1:exon
so has part: feature:102923-103018:-1:exon
so has part: feature:101706-101846:-1:exon
so has part: feature:101071-101213:-1:exon
so has part: feature:100705-100804:-1:exon
so has part: feature:98939-99100:-1:exon
so has part: feature:97092-97247:-1:exon
so has part: feature:95329-95556:-1:exon
so has part: feature:94483-94557:-1:exon
so has part: feature:93819-93902:-1:exon
so has part: feature:93074-93182:-1:exon
so has part: feature:92495-92673:-1:exon
so has part: feature:91704-91830:-1:exon
so has part: feature:91116-91267:-1:exon
so has part: feature:90212-90385:-1:exon
so has part: feature:89437-89625:-1:exon
so has part: feature:88571-88784:-1:exon
so has part: feature:87893-88216:-1:exon
so has part: feature:86691-86911:-1:exon

XP_030309436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109033-109181:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106440-106528:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104720-104843:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:103732-103927:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:102923-103018:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:101706-101846:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:101071-101213:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:100705-100804:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:98939-99100:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:97092-97247:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:95329-95556:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:94483-94557:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:93819-93902:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:93074-93182:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:92495-92673:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:91704-91830:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:91116-91267:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:90212-90385:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:89437-89625:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:88571-88784:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:87893-88216:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:86691-86911:-1:exon

SEC31B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SEC31B
product: SEC31 homolog B, COPII coat complex component, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030453578.1
SIO_010081: SEC31B
subclass of: SO_0000673
so part of: SEC31B
location: complement(join(86944..87653,87893..88216,88571..88784,89437..89625,90212..90385,91116..91267,91704..91830,92495..92673,93074..93182,93819..93902,94483..94557,95329..95556,97092..97247,98939..99100,100705..100804,101071..101213,101706..101846,102923..103018,103732..103927,104720..104843,106440..106528,109033..109195))
location: region:86944-109195:-1
so has part: feature:109033-109195:-1:exon
so has part: feature:106440-106528:-1:exon
so has part: feature:104720-104843:-1:exon
so has part: feature:103732-103927:-1:exon
so has part: feature:102923-103018:-1:exon
so has part: feature:101706-101846:-1:exon
so has part: feature:101071-101213:-1:exon
so has part: feature:100705-100804:-1:exon
so has part: feature:98939-99100:-1:exon
so has part: feature:97092-97247:-1:exon
so has part: feature:95329-95556:-1:exon
so has part: feature:94483-94557:-1:exon
so has part: feature:93819-93902:-1:exon
so has part: feature:93074-93182:-1:exon
so has part: feature:92495-92673:-1:exon
so has part: feature:91704-91830:-1:exon
so has part: feature:91116-91267:-1:exon
so has part: feature:90212-90385:-1:exon
so has part: feature:89437-89625:-1:exon
so has part: feature:88571-88784:-1:exon
so has part: feature:87893-88216:-1:exon
so has part: feature:86944-87653:-1:exon

position:86944:-1
position: 86944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109033-109195:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106440-106528:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104720-104843:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:103732-103927:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:102923-103018:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:101706-101846:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:101071-101213:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:100705-100804:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:98939-99100:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:97092-97247:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:95329-95556:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:94483-94557:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:93819-93902:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:93074-93182:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:92495-92673:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:91704-91830:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:91116-91267:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:90212-90385:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:89437-89625:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:88571-88784:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:87893-88216:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:86944-87653:-1:exon

position:87653:-1
position: 87653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SEC31B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SEC31B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein transport protein Sec31B isoform X7
translation: MTGGASRAAVFRLPAATVVRAVLRKASGAGRASSAQSSPVRPSPVQSSQRAWKMKLKEIERTAVQAWSPANHHPIYLATGTSAQQLDASFSTNATLEIFEVDFRDPSLDMKQKGTLTASNRFHKLVWGNFGNGSPEPSGVIIGGGDNGVLTMYSAHHILTSKSEPVIGQTEKHSGPVRALDFNPFQSNLLASGANDSEIFIWDLNNFSVPMTPGTKSQPHEDISVVSWNRQVQHILSSAHPSGKAVVWDLRKNEPIIKVSDHSNRMHCSGMAWHPEVATQLVLSSEDDRLPVIQIWDLRFATSPLSQLEKHTRGVLSLSWCQADPELLLSSAKDNRILCWNPSVGEVVYELPIRSQWCFDVQWCPRNPSVFSAATFDGWINIYSVMGGNLEAQQKTQADKISSSFNSLLDPFGTGQILPPLQVPEQVAQTTSIPPLKKPPKWIRRPVGVSFAFGGKLISFGLAKAGQQMQQAHPHQVFISQVTTETEFLLRSRELQMALQSGNLLDYCQGKIQTAKLPFDENLWNFLKVNLEQDSRTKLLRLLGYSKEELQKKIASCLSNGIPDKQPLPEADETSAAQADQLLINSSDDGAAVSTSSTFFDSLIPQNMSTLEIPVTEDTDGLISQALLLGNFEGAVELCMRAERFADAIILAIAGGENLLKETQKRYFAKRQTKLSLLLSSIVQQNWQDIVRTCDLQSWKEALAILLTYSKHEDYTQLCDMLGARLESEGDAALCSDACLCYISSGNVERLVECWVKNHETSSPLALQVQDLIEKVMVLSRSVEMLQGTAGPAPGPVLAEQITQYASLLASQGCLAAAMSYLPSSSKELPMEQLRDRLFHAQGENVGDQQPPPFPYTRVNVGVIKHTSPAAKGGCAPERTAHKTGPRHPEKPNYQSPFAPSAPPQSSVPSLFTPQPVPAMSGTPHHVASPQAATGPQTGVYSRGPPYPQYNLGLAPATIAGPAVSQSQPFGPVGLGPVGAAPFPSQPSLPGQSMPVTSPSVQPPKPALFNPASVPSSQPPAACPLPMGSQPPMGFTLPFNSPMNIGYPQGGPGAPSTQPLPAASIPPPPTGLQCTLRSHPLQRHLL
SIO_010081: SEC31B
subclass of: SO_0000673
so part of: SEC31B
location: complement(join(87604..87653,87893..88216,88571..88784,89437..89625,90212..90385,91116..91267,91704..91830,92495..92673,93074..93182,93819..93902,94483..94557,95329..95556,97092..97247,98939..99100,100705..100804,101071..101213,101706..101846,102923..103018,103732..103927,104720..104843,106440..106528,109033..109181))
location: region:87604-109181:-1
so has part: feature:109033-109181:-1:exon
so has part: feature:106440-106528:-1:exon
so has part: feature:104720-104843:-1:exon
so has part: feature:103732-103927:-1:exon
so has part: feature:102923-103018:-1:exon
so has part: feature:101706-101846:-1:exon
so has part: feature:101071-101213:-1:exon
so has part: feature:100705-100804:-1:exon
so has part: feature:98939-99100:-1:exon
so has part: feature:97092-97247:-1:exon
so has part: feature:95329-95556:-1:exon
so has part: feature:94483-94557:-1:exon
so has part: feature:93819-93902:-1:exon
so has part: feature:93074-93182:-1:exon
so has part: feature:92495-92673:-1:exon
so has part: feature:91704-91830:-1:exon
so has part: feature:91116-91267:-1:exon
so has part: feature:90212-90385:-1:exon
so has part: feature:89437-89625:-1:exon
so has part: feature:88571-88784:-1:exon
so has part: feature:87893-88216:-1:exon
so has part: feature:87604-87653:-1:exon

XP_030309438.1
type: Protein
SIO_000068: ncbiprotein

position:87604:-1
position: 87604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109033-109181:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106440-106528:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104720-104843:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:103732-103927:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:102923-103018:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:101706-101846:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:101071-101213:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:100705-100804:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:98939-99100:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:97092-97247:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:95329-95556:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:94483-94557:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:93819-93902:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:93074-93182:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:92495-92673:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:91704-91830:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:91116-91267:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:90212-90385:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:89437-89625:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:88571-88784:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:87893-88216:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:87604-87653:-1:exon

NDUFB8
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: NDUFB8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(111096..113745)
location: region:111096-113745:-1
so has part: feature:111096-113745:-1:exon
subclass of: SO_0000010

103537673
type: Gene
SIO_000068: ncbigene

position:111096:-1
position: 111096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113745:-1
position: 113745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111096-113745:-1:exon

NDUFB8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NDUFB8
product: NADH:ubiquinone oxidoreductase subunit B8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030452835.1
SIO_010081: NDUFB8
subclass of: SO_0000673
so part of: NDUFB8
location: complement(join(111096..111328,111960..112115,112710..112809,113251..113377,113619..113745))
location: region:111096-113745:-1
so has part: feature:113619-113745:-1:exon
so has part: feature:113251-113377:-1:exon
so has part: feature:112710-112809:-1:exon
so has part: feature:111960-112115:-1:exon
so has part: feature:111096-111328:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:113619-113745:-1:exon

position:113619:-1
position: 113619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:113251-113377:-1:exon

position:113251:-1
position: 113251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113377:-1
position: 113377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:112710-112809:-1:exon

position:112710:-1
position: 112710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112809:-1
position: 112809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:111960-112115:-1:exon

position:111960:-1
position: 111960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112115:-1
position: 112115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:111096-111328:-1:exon

position:111328:-1
position: 111328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NDUFB8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NDUFB8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial
translation: MAAAGFRRVLWPRAPARIWAARAALPPGTRGASEMSKDLLPGPYPRTPEERAAAAKKYNMRVEDYEPYPDEGFGYGDYPKLPNKSLHERDPWYQWDQQDLRHNWGQPMHWNFDMYIRNRVDTSPTPVPWHIMSKHLLVFLGTMLVMFALGEIYPSYRPVGPKQYPFNDLYLERGGDPSKEPPAVTHYEI
SIO_010081: NDUFB8
subclass of: SO_0000673
so part of: NDUFB8
location: complement(join(111236..111328,111960..112115,112710..112809,113251..113377,113619..113712))
location: region:111236-113712:-1
so has part: feature:113619-113712:-1:exon
so has part: feature:113251-113377:-1:exon
so has part: feature:112710-112809:-1:exon
so has part: feature:111960-112115:-1:exon
so has part: feature:111236-111328:-1:exon

XP_030308695.1
type: Protein
SIO_000068: ncbiprotein

position:111236:-1
position: 111236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113712:-1
position: 113712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113619-113712:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:113251-113377:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:112710-112809:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:111960-112115:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:111236-111328:-1:exon

HIF1AN
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: HIF1AN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 113898..122977
location: region:113898-122977:1
so has part: feature:113898-122977:1:exon
subclass of: SO_0000010

103537704
type: Gene
SIO_000068: ncbigene

position:113898:1
position: 113898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122977:1
position: 122977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113898-122977:1:exon

HIF1AN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: HIF1AN
product: hypoxia inducible factor 1 subunit alpha inhibitor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 2 long SRA reads, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030452834.1
SIO_010081: HIF1AN
subclass of: SO_0000673
so part of: HIF1AN
location: join(113898..114402,115368..115618,116552..116700,118305..118450,118785..118891,119276..119339,119556..119666,120463..122977)
location: region:113898-122977:1
so has part: feature:113898-114402:1:exon
so has part: feature:115368-115618:1:exon
so has part: feature:116552-116700:1:exon
so has part: feature:118305-118450:1:exon
so has part: feature:118785-118891:1:exon
so has part: feature:119276-119339:1:exon
so has part: feature:119556-119666:1:exon
so has part: feature:120463-122977:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:113898-114402:1:exon

position:114402:1
position: 114402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:115368-115618:1:exon

position:115368:1
position: 115368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115618:1
position: 115618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:116552-116700:1:exon

position:116552:1
position: 116552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116700:1
position: 116700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:118305-118450:1:exon

position:118305:1
position: 118305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118450:1
position: 118450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:118785-118891:1:exon

position:118785:1
position: 118785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118891:1
position: 118891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:119276-119339:1:exon

position:119276:1
position: 119276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119339:1
position: 119339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:119556-119666:1:exon

position:119556:1
position: 119556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119666:1
position: 119666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:120463-122977:1:exon

position:120463:1
position: 120463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HIF1AN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: HIF1AN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hypoxia-inducible factor 1-alpha inhibitor
translation: MAAASSSSAAASGCLEGPAATAGPGWSESQFRRYSFETRPIPRLSHSDPRAEELIENEEPVVLTDTNLVYPALKWDLDYLQENIGNGDFSVYSASTHKFLYYDEKKMANFKNFKPKSSREEMKFAEFVERLKEIQQQGSAERLYLQQTLNDTVGRKIVVDFLGFNWNWINKQQGKRGWGQLTSNLLLIGMEGNVTPAHYDEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYEKFPNFRSVVGYETVVGPGDVLYIPMYWWHHIESLLNGGITITVNFWYKGAPTPKRIEYPLKAHQKVAIMRNIEKMLGEALGNPQEVGPLLNMMIKGRYD
SIO_010081: HIF1AN
subclass of: SO_0000673
so part of: HIF1AN
location: join(114229..114402,115368..115618,116552..116700,118305..118450,118785..118891,119276..119339,119556..119666,120463..120507)
location: region:114229-120507:1
so has part: feature:114229-114402:1:exon
so has part: feature:115368-115618:1:exon
so has part: feature:116552-116700:1:exon
so has part: feature:118305-118450:1:exon
so has part: feature:118785-118891:1:exon
so has part: feature:119276-119339:1:exon
so has part: feature:119556-119666:1:exon
so has part: feature:120463-120507:1:exon

XP_030308694.1
type: Protein
SIO_000068: ncbiprotein

position:114229:1
position: 114229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120507:1
position: 120507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114229-114402:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:115368-115618:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:116552-116700:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:118305-118450:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:118785-118891:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:119276-119339:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:119556-119666:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:120463-120507:1:exon

LOC115598535
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115598535
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(225319..229817)
location: region:225319-229817:-1
so has part: feature:225319-229817:-1:exon
subclass of: SO_0000011

115598535
type: Gene
SIO_000068: ncbigene

position:225319:-1
position: 225319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229817:-1
position: 229817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225319-229817:-1:exon

LOC115598535
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115598535
product: uncharacterized LOC115598535
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003987715.1
SIO_010081: LOC115598535
subclass of: SO_0000673
so part of: LOC115598535
location: complement(join(225319..225565,226073..226228,229709..229817))
location: region:225319-229817:-1
so has part: feature:229709-229817:-1:exon
so has part: feature:226073-226228:-1:exon
so has part: feature:225319-225565:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:229709-229817:-1:exon

position:229709:-1
position: 229709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:226073-226228:-1:exon

position:226073:-1
position: 226073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226228:-1
position: 226228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:225319-225565:-1:exon

position:225565:-1
position: 225565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PAX2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PAX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 327102..400171
location: region:327102-400171:1
so has part: feature:327102-400171:1:exon
subclass of: SO_0000010

103537705
type: Gene
SIO_000068: ncbigene

position:327102:1
position: 327102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400171:1
position: 400171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327102-400171:1:exon

PAX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PAX2
product: paired box 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 Proteins, and 36% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030452916.1
SIO_010081: PAX2
subclass of: SO_0000673
so part of: PAX2
location: join(327102..327311,331196..331364,332209..332406,356813..356898,358895..359014,379041..379216,380910..381036,394438..394539,398694..398780,400009..400171)
location: region:327102-400171:1
so has part: feature:327102-327311:1:exon
so has part: feature:331196-331364:1:exon
so has part: feature:332209-332406:1:exon
so has part: feature:356813-356898:1:exon
so has part: feature:358895-359014:1:exon
so has part: feature:379041-379216:1:exon
so has part: feature:380910-381036:1:exon
so has part: feature:394438-394539:1:exon
so has part: feature:398694-398780:1:exon
so has part: feature:400009-400171:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:327102-327311:1:exon

position:327311:1
position: 327311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:331196-331364:1:exon

position:331196:1
position: 331196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331364:1
position: 331364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:332209-332406:1:exon

position:332209:1
position: 332209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332406:1
position: 332406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:356813-356898:1:exon

position:356813:1
position: 356813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356898:1
position: 356898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:358895-359014:1:exon

position:358895:1
position: 358895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359014:1
position: 359014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:379041-379216:1:exon

position:379041:1
position: 379041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379216:1
position: 379216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:380910-381036:1:exon

position:380910:1
position: 380910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381036:1
position: 381036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:394438-394539:1:exon

position:394438:1
position: 394438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394539:1
position: 394539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:398694-398780:1:exon

position:398694:1
position: 398694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398780:1
position: 398780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:400009-400171:1:exon

position:400009:1
position: 400009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PAX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PAX2
product: paired box 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 16 Proteins, and 35% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030452917.1
SIO_010081: PAX2
subclass of: SO_0000673
so part of: PAX2
location: join(327102..327311,331196..331364,332209..332406,356813..356898,358895..359014,379041..379216,380910..381036,394438..394539,398694..398780,399990..400134)
location: region:327102-400134:1
so has part: feature:327102-327311:1:exon
so has part: feature:331196-331364:1:exon
so has part: feature:332209-332406:1:exon
so has part: feature:356813-356898:1:exon
so has part: feature:358895-359014:1:exon
so has part: feature:379041-379216:1:exon
so has part: feature:380910-381036:1:exon
so has part: feature:394438-394539:1:exon
so has part: feature:398694-398780:1:exon
so has part: feature:399990-400134:1:exon

position:400134:1
position: 400134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327102-327311:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:331196-331364:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:332209-332406:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:356813-356898:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:358895-359014:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379041-379216:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:380910-381036:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:394438-394539:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:398694-398780:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:399990-400134:1:exon

position:399990:1
position: 399990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PAX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PAX2
product: paired box 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins, and 44% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030452919.1
SIO_010081: PAX2
subclass of: SO_0000673
so part of: PAX2
location: join(327269..327311,331196..331364,332209..332406,356813..356898,379041..379216,380910..381036,394438..394539,398694..398780,399990..400134)
location: region:327269-400134:1
so has part: feature:327269-327311:1:exon
so has part: feature:331196-331364:1:exon
so has part: feature:332209-332406:1:exon
so has part: feature:356813-356898:1:exon
so has part: feature:379041-379216:1:exon
so has part: feature:380910-381036:1:exon
so has part: feature:394438-394539:1:exon
so has part: feature:398694-398780:1:exon
so has part: feature:399990-400134:1:exon

position:327269:1
position: 327269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327269-327311:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:331196-331364:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:332209-332406:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:356813-356898:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:379041-379216:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:380910-381036:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:394438-394539:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:398694-398780:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:399990-400134:1:exon

PAX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PAX2
product: paired box 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 40% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030452918.1
SIO_010081: PAX2
subclass of: SO_0000673
so part of: PAX2
location: join(327269..327311,331199..331364,332209..332406,356813..356898,358895..359014,379041..379216,380910..381036,394438..394539,398694..398780,399990..400134)
location: region:327269-400134:1
so has part: feature:327269-327311:1:exon
so has part: feature:331199-331364:1:exon
so has part: feature:332209-332406:1:exon
so has part: feature:356813-356898:1:exon
so has part: feature:358895-359014:1:exon
so has part: feature:379041-379216:1:exon
so has part: feature:380910-381036:1:exon
so has part: feature:394438-394539:1:exon
so has part: feature:398694-398780:1:exon
so has part: feature:399990-400134:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:327269-327311:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:331199-331364:1:exon

position:331199:1
position: 331199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:332209-332406:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:356813-356898:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:358895-359014:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379041-379216:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:380910-381036:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:394438-394539:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:398694-398780:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:399990-400134:1:exon

PAX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PAX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paired box protein Pax-2 isoform X1
translation: MDMHCKADPFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVPSVSSINRIIRTKVQQPFHPTPDGSGTGVTAPGHTIVPSTASPPVSSASNDPVGSYSINGILGIPRSNGEKRKRDEDVSEGSVPNGDSQSSVDSLRKHLRGDTFTQQQLEALDRVFERPSYPDVFQTSEHIKSEQGNEYSLPALTPGLDEVKSSLSTSANPDLGTNVSGPQTYPVVTGRDMASTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSGNPYSHPQYTTYNEAWRFSNPALLMPHPGAPHLPLLPLPMTATSYHGNHMKLQGDSLGLHIVPV
SIO_010081: PAX2
subclass of: SO_0000673
so part of: PAX2
location: join(327269..327311,331196..331364,332209..332406,356813..356898,358895..359014,379041..379216,380910..381036,394438..394539,398694..398780,400009..400130)
location: region:327269-400130:1
so has part: feature:327269-327311:1:exon
so has part: feature:331196-331364:1:exon
so has part: feature:332209-332406:1:exon
so has part: feature:356813-356898:1:exon
so has part: feature:358895-359014:1:exon
so has part: feature:379041-379216:1:exon
so has part: feature:380910-381036:1:exon
so has part: feature:394438-394539:1:exon
so has part: feature:398694-398780:1:exon
so has part: feature:400009-400130:1:exon

XP_030308776.1
type: Protein
SIO_000068: ncbiprotein

position:400130:1
position: 400130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327269-327311:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:331196-331364:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:332209-332406:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:356813-356898:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:358895-359014:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379041-379216:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:380910-381036:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:394438-394539:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:398694-398780:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:400009-400130:1:exon

PAX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PAX2
product: paired box 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 Proteins, and 21% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030452920.1
SIO_010081: PAX2
subclass of: SO_0000673
so part of: PAX2
location: join(327269..327311,331196..331364,332209..332406,356813..356898,358895..359014,379041..379216,394438..394539,398694..398780,399990..400066)
location: region:327269-400066:1
so has part: feature:327269-327311:1:exon
so has part: feature:331196-331364:1:exon
so has part: feature:332209-332406:1:exon
so has part: feature:356813-356898:1:exon
so has part: feature:358895-359014:1:exon
so has part: feature:379041-379216:1:exon
so has part: feature:394438-394539:1:exon
so has part: feature:398694-398780:1:exon
so has part: feature:399990-400066:1:exon

position:400066:1
position: 400066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327269-327311:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:331196-331364:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:332209-332406:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:356813-356898:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:358895-359014:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379041-379216:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:394438-394539:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:398694-398780:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:399990-400066:1:exon

PAX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PAX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paired box protein Pax-2 isoform X2
translation: MDMHCKADPFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVPSVSSINRIIRTKVQQPFHPTPDGSGTGVTAPGHTIVPSTASPPVSSASNDPVGSYSINGILGIPRSNGEKRKRDEDVSEGSVPNGDSQSSVDSLRKHLRGDTFTQQQLEALDRVFERPSYPDVFQTSEHIKSEQGNEYSLPALTPGLDEVKSSLSTSANPDLGTNVSGPQTYPVVTGRDMASTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSGNPYSHPQYTTYNEAWRFSNPALLSSPYYYSATSRGSAPPTAAAAYDRH
SIO_010081: PAX2
subclass of: SO_0000673
so part of: PAX2
location: join(327269..327311,331196..331364,332209..332406,356813..356898,358895..359014,379041..379216,380910..381036,394438..394539,398694..398780,399990..400066)
location: region:327269-400066:1
so has part: feature:327269-327311:1:exon
so has part: feature:331196-331364:1:exon
so has part: feature:332209-332406:1:exon
so has part: feature:356813-356898:1:exon
so has part: feature:358895-359014:1:exon
so has part: feature:379041-379216:1:exon
so has part: feature:380910-381036:1:exon
so has part: feature:394438-394539:1:exon
so has part: feature:398694-398780:1:exon
so has part: feature:399990-400066:1:exon

XP_030308777.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327269-327311:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:331196-331364:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:332209-332406:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:356813-356898:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:358895-359014:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379041-379216:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:380910-381036:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:394438-394539:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:398694-398780:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:399990-400066:1:exon

PAX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PAX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paired box protein Pax-2 isoform X4
translation: MDMHCKADPFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVPSVSSINRIIRTKVQQPFHPTPDGSGTGVTAPGHTIDVSEGSVPNGDSQSSVDSLRKHLRGDTFTQQQLEALDRVFERPSYPDVFQTSEHIKSEQGNEYSLPALTPGLDEVKSSLSTSANPDLGTNVSGPQTYPVVTGRDMASTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSGNPYSHPQYTTYNEAWRFSNPALLSSPYYYSATSRGSAPPTAAAAYDRH
SIO_010081: PAX2
subclass of: SO_0000673
so part of: PAX2
location: join(327269..327311,331196..331364,332209..332406,356813..356898,379041..379216,380910..381036,394438..394539,398694..398780,399990..400066)
location: region:327269-400066:1
so has part: feature:327269-327311:1:exon
so has part: feature:331196-331364:1:exon
so has part: feature:332209-332406:1:exon
so has part: feature:356813-356898:1:exon
so has part: feature:379041-379216:1:exon
so has part: feature:380910-381036:1:exon
so has part: feature:394438-394539:1:exon
so has part: feature:398694-398780:1:exon
so has part: feature:399990-400066:1:exon

XP_030308779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327269-327311:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:331196-331364:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:332209-332406:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:356813-356898:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:379041-379216:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:380910-381036:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:394438-394539:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:398694-398780:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:399990-400066:1:exon

PAX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PAX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paired box protein Pax-2 isoform X3
translation: MDMHCKADPFSAMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVPSVSSINRIIRTKVQQPFHPTPDGSGTGVTAPGHTIVPSTASPPVSSASNDPVGSYSINGILGIPRSNGEKRKRDEDVSEGSVPNGDSQSSVDSLRKHLRGDTFTQQQLEALDRVFERPSYPDVFQTSEHIKSEQGNEYSLPALTPGLDEVKSSLSTSANPDLGTNVSGPQTYPVVTGRDMASTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSGNPYSHPQYTTYNEAWRFSNPALLSSPYYYSATSRGSAPPTAAAAYDRH
SIO_010081: PAX2
subclass of: SO_0000673
so part of: PAX2
location: join(327269..327311,331199..331364,332209..332406,356813..356898,358895..359014,379041..379216,380910..381036,394438..394539,398694..398780,399990..400066)
location: region:327269-400066:1
so has part: feature:327269-327311:1:exon
so has part: feature:331199-331364:1:exon
so has part: feature:332209-332406:1:exon
so has part: feature:356813-356898:1:exon
so has part: feature:358895-359014:1:exon
so has part: feature:379041-379216:1:exon
so has part: feature:380910-381036:1:exon
so has part: feature:394438-394539:1:exon
so has part: feature:398694-398780:1:exon
so has part: feature:399990-400066:1:exon

XP_030308778.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327269-327311:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:331199-331364:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:332209-332406:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:356813-356898:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:358895-359014:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379041-379216:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:380910-381036:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:394438-394539:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:398694-398780:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:399990-400066:1:exon

PAX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PAX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paired box protein Pax-2 isoform X5
translation: MDMHCKADPFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVPSVSSINRIIRTKVQQPFHPTPDGSGTGVTAPGHTIVPSTASPPVSSASNDPVGSYSINGILGIPRSNGEKRKRDEDVSEGSVPNGDSQSSVDSLRKHLRGDTFTQQQLEALDRVFERPSYPDVFQTSEHIKSEQVVTWQAPPCLATHPMFLRLGKAATPPQPLQEWFLGASSQGTPTATLSTQPTTRPGGSATPRY
SIO_010081: PAX2
subclass of: SO_0000673
so part of: PAX2
location: join(327269..327311,331196..331364,332209..332406,356813..356898,358895..359014,379041..379216,394438..394539,398694..398780)
location: region:327269-398780:1
so has part: feature:327269-327311:1:exon
so has part: feature:331196-331364:1:exon
so has part: feature:332209-332406:1:exon
so has part: feature:356813-356898:1:exon
so has part: feature:358895-359014:1:exon
so has part: feature:379041-379216:1:exon
so has part: feature:394438-394539:1:exon
so has part: feature:398694-398780:1:exon

XP_030308780.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327269-327311:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:331196-331364:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:332209-332406:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:356813-356898:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:358895-359014:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379041-379216:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:394438-394539:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:398694-398780:1:exon

CUEDC2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: CUEDC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 485804..496195
location: region:485804-496195:1
so has part: feature:485804-496195:1:exon
subclass of: SO_0000010

103537674
type: Gene
SIO_000068: ncbigene

position:485804:1
position: 485804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496195:1
position: 496195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485804-496195:1:exon

CUEDC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CUEDC2
product: CUE domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030452923.1
SIO_010081: CUEDC2
subclass of: SO_0000673
so part of: CUEDC2
location: join(485804..485913,486605..486687,490684..490781,491376..491519,491821..491882,492247..492380,493183..493353,493625..493686,495293..495353,495669..495865)
location: region:485804-495865:1
so has part: feature:485804-485913:1:exon
so has part: feature:486605-486687:1:exon
so has part: feature:490684-490781:1:exon
so has part: feature:491376-491519:1:exon
so has part: feature:491821-491882:1:exon
so has part: feature:492247-492380:1:exon
so has part: feature:493183-493353:1:exon
so has part: feature:493625-493686:1:exon
so has part: feature:495293-495353:1:exon
so has part: feature:495669-495865:1:exon

position:495865:1
position: 495865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485804-485913:1:exon

position:485913:1
position: 485913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:486605-486687:1:exon

position:486605:1
position: 486605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486687:1
position: 486687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:490684-490781:1:exon

position:490684:1
position: 490684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490781:1
position: 490781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:491376-491519:1:exon

position:491376:1
position: 491376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491519:1
position: 491519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:491821-491882:1:exon

position:491821:1
position: 491821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491882:1
position: 491882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:492247-492380:1:exon

position:492247:1
position: 492247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492380:1
position: 492380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:493183-493353:1:exon

position:493183:1
position: 493183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493353:1
position: 493353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:493625-493686:1:exon

position:493625:1
position: 493625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493686:1
position: 493686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:495293-495353:1:exon

position:495293:1
position: 495293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495353:1
position: 495353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:495669-495865:1:exon

position:495669:1
position: 495669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CUEDC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CUEDC2
product: CUE domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 long SRA read, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030452922.1
SIO_010081: CUEDC2
subclass of: SO_0000673
so part of: CUEDC2
location: join(485809..485901,486605..486687,490684..490781,491376..491519,491821..491882,492247..492380,493183..493353,493625..493686,495293..495353,495669..496195)
location: region:485809-496195:1
so has part: feature:485809-485901:1:exon
so has part: feature:486605-486687:1:exon
so has part: feature:490684-490781:1:exon
so has part: feature:491376-491519:1:exon
so has part: feature:491821-491882:1:exon
so has part: feature:492247-492380:1:exon
so has part: feature:493183-493353:1:exon
so has part: feature:493625-493686:1:exon
so has part: feature:495293-495353:1:exon
so has part: feature:495669-496195:1:exon

position:485809:1
position: 485809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485809-485901:1:exon

position:485901:1
position: 485901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:486605-486687:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:490684-490781:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:491376-491519:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:491821-491882:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:492247-492380:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:493183-493353:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:493625-493686:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:495293-495353:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:495669-496195:1:exon

CUEDC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CUEDC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUE domain-containing protein 2
translation: MELERIIRDTLTCFIQSHIPAADLSGMDDVFFSYITGVLEELGLPEASEETFDMDTFVEMMEAYIPGFAEIPSGDVCEMMFSLSERLGEARSKEKRDQKAVGSGSEAPSEELTESQEAGAEGWNGERLCSATDGARAQEGDDSKGGVELLLEMFPACTVSQAEKALGMALGNLEEAVQLIVEEKVEIGPGGASTKELARPRRAPNHEELKQVILQKYMMVDSADDQKTHRPAPPREAPKKLIRYIDNQVVSTKGERYKDIKKPESQEMRRTYISLKPARKYKFH
SIO_010081: CUEDC2
subclass of: SO_0000673
so part of: CUEDC2
location: join(490708..490781,491376..491519,491821..491882,492247..492380,493183..493353,493625..493686,495293..495353,495669..495815)
location: region:490708-495815:1
so has part: feature:490708-490781:1:exon
so has part: feature:491376-491519:1:exon
so has part: feature:491821-491882:1:exon
so has part: feature:492247-492380:1:exon
so has part: feature:493183-493353:1:exon
so has part: feature:493625-493686:1:exon
so has part: feature:495293-495353:1:exon
so has part: feature:495669-495815:1:exon

XP_030308782.1
type: Protein
SIO_000068: ncbiprotein

position:490708:1
position: 490708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495815:1
position: 495815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490708-490781:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:491376-491519:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:491821-491882:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:492247-492380:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:493183-493353:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:493625-493686:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:495293-495353:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:495669-495815:1:exon

CUEDC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CUEDC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUE domain-containing protein 2
translation: MELERIIRDTLTCFIQSHIPAADLSGMDDVFFSYITGVLEELGLPEASEETFDMDTFVEMMEAYIPGFAEIPSGDVCEMMFSLSERLGEARSKEKRDQKAVGSGSEAPSEELTESQEAGAEGWNGERLCSATDGARAQEGDDSKGGVELLLEMFPACTVSQAEKALGMALGNLEEAVQLIVEEKVEIGPGGASTKELARPRRAPNHEELKQVILQKYMMVDSADDQKTHRPAPPREAPKKLIRYIDNQVVSTKGERYKDIKKPESQEMRRTYISLKPARKYKFH
SIO_010081: CUEDC2
subclass of: SO_0000673
so part of: CUEDC2
location: join(490708..490781,491376..491519,491821..491882,492247..492380,493183..493353,493625..493686,495293..495353,495669..495815)
location: region:490708-495815:1
so has part: feature:490708-490781:1:exon
so has part: feature:491376-491519:1:exon
so has part: feature:491821-491882:1:exon
so has part: feature:492247-492380:1:exon
so has part: feature:493183-493353:1:exon
so has part: feature:493625-493686:1:exon
so has part: feature:495293-495353:1:exon
so has part: feature:495669-495815:1:exon

XP_030308783.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:490708-490781:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:491376-491519:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:491821-491882:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:492247-492380:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:493183-493353:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:493625-493686:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:495293-495353:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:495669-495815:1:exon

FBXL15
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: FBXL15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(497754..499773)
location: region:497754-499773:-1
so has part: feature:497754-499773:-1:exon
subclass of: SO_0000010

103537676
type: Gene
SIO_000068: ncbigene

position:497754:-1
position: 497754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499773:-1
position: 499773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497754-499773:-1:exon

FBXL15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FBXL15
product: F-box and leucine rich repeat protein 15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_030453149.1
SIO_010081: FBXL15
subclass of: SO_0000673
so part of: FBXL15
location: complement(join(497754..498290,499024..499274,499740..499773))
location: region:497754-499773:-1
so has part: feature:499740-499773:-1:exon
so has part: feature:499024-499274:-1:exon
so has part: feature:497754-498290:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:499740-499773:-1:exon

position:499740:-1
position: 499740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:499024-499274:-1:exon

position:499024:-1
position: 499024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499274:-1
position: 499274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:497754-498290:-1:exon

position:498290:-1
position: 498290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FBXL15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FBXL15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/LRR-repeat protein 15
translation: MERAGAARRAAEGCRSGCEVVQPGSPPGPAPRRPMMSLTPSRGCLLDLPWEDILVPHILCHLPLQQLLSLQRVSRAFQALIQLYLANMRCFDSTQASFGLPVQIGGLHPSGCFVNLLEGQRSAAAAVPPELLRVADDRELLPVIGQNQHLQRGPAEGLRPAEPPRAGGPVPQLPRPQAPLPGPLRVGWTAWPCAAWPTHCPGLQALDLTACRQLKDEAICYLCTSVEASSPCPWLSTPTWATPPWRRSPGAAPSWSNLDLTGCLRVKNDSIRY
SIO_010081: FBXL15
subclass of: SO_0000673
so part of: FBXL15
location: complement(join(497754..498290,499024..499274,499740..499773))
location: region:497754-499773:-1
so has part: feature:499740-499773:-1:exon
so has part: feature:499024-499274:-1:exon
so has part: feature:497754-498290:-1:exon

XP_030309009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:499740-499773:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:499024-499274:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:497754-498290:-1:exon

PSD
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PSD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 511167..540801
location: region:511167-540801:1
so has part: feature:511167-540801:1:exon
subclass of: SO_0000010

103537706
type: Gene
SIO_000068: ncbigene

position:511167:1
position: 511167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540801:1
position: 540801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511167-540801:1:exon

PSD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PSD
product: pleckstrin and Sec7 domain containing
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 long SRA read, 18 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008504020.2
SIO_010081: PSD
subclass of: SO_0000673
so part of: PSD
location: join(511167..511937,512017..512119,512650..513097,517344..517778,524475..524669,525123..525203,525743..525855,526239..526297,526758..526847,535974..536017,537230..537408,538133..538203,538644..538801,539078..539222,539870..540013,540124..540801)
location: region:511167-540801:1
so has part: feature:511167-511937:1:exon
so has part: feature:512017-512119:1:exon
so has part: feature:512650-513097:1:exon
so has part: feature:517344-517778:1:exon
so has part: feature:524475-524669:1:exon
so has part: feature:525123-525203:1:exon
so has part: feature:525743-525855:1:exon
so has part: feature:526239-526297:1:exon
so has part: feature:526758-526847:1:exon
so has part: feature:535974-536017:1:exon
so has part: feature:537230-537408:1:exon
so has part: feature:538133-538203:1:exon
so has part: feature:538644-538801:1:exon
so has part: feature:539078-539222:1:exon
so has part: feature:539870-540013:1:exon
so has part: feature:540124-540801:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:511167-511937:1:exon

position:511937:1
position: 511937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:512017-512119:1:exon

position:512017:1
position: 512017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512119:1
position: 512119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:512650-513097:1:exon

position:512650:1
position: 512650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513097:1
position: 513097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:517344-517778:1:exon

position:517344:1
position: 517344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517778:1
position: 517778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:524475-524669:1:exon

position:524475:1
position: 524475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524669:1
position: 524669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:525123-525203:1:exon

position:525123:1
position: 525123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525203:1
position: 525203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:525743-525855:1:exon

position:525743:1
position: 525743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525855:1
position: 525855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:526239-526297:1:exon

position:526239:1
position: 526239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526297:1
position: 526297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:526758-526847:1:exon

position:526758:1
position: 526758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526847:1
position: 526847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:535974-536017:1:exon

position:535974:1
position: 535974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536017:1
position: 536017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:537230-537408:1:exon

position:537230:1
position: 537230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537408:1
position: 537408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:538133-538203:1:exon

position:538133:1
position: 538133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538203:1
position: 538203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:538644-538801:1:exon

position:538644:1
position: 538644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538801:1
position: 538801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:539078-539222:1:exon

position:539078:1
position: 539078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539222:1
position: 539222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:539870-540013:1:exon

position:539870:1
position: 539870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540013:1
position: 540013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:540124-540801:1:exon

position:540124:1
position: 540124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PSD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PH and SEC7 domain-containing protein 1
translation: MAQAGGPVRFHPEEGCSASPPAFARGVSRRPWLSGGSPEAGRHSPPRCLTPNLNAGRLHLLRKGLAPDVRRCPLGLYNSTGSLARPPLDPAAFGDGSCPGAGRSTAPCTPRRGGPGPALCSPGSRSPLVAPEGRSSIVTFRFIEKASVRTLSGLPASRPRWDDGPHSLSRSLELSGDAGSPPPQPLPQDRLLHSLKLESSVSDPLLAGGRTPGGPRPCGKEPCALDAGCLCRSLTNGLPGDFPTLARSPPKPEPQPQGSSWLYPRQSSAHAQRVAKAKWEFFYGSSDAPKTGSCAPDSAPLAQPPQKPARLLPAEHSLSHVEVEIELSPPGSQKLSSCETGIIRRTVKYSETDLDTVPLRCYRETNIDDILAEKEEVDSAIESQKDSESNPSFGGTPGRRNSTPEEPPALGSGFPKEGLRDGDADEDSEVFETTRKENRERILDQDTQGMLKSPVPFLLGHSLSKDGMDSFSKHFESIMESHRAKGTSYTSLDSIDILSSPAPTQGTFFTFDLPTLTPEIQGKIRDSAKLIEENFAPLAHLEPDSGTSSATDAPWTEREEERGKRKKGAWHSPCCSEESCATPNISNHPQSHAVLDSDSELDSVEQLALGSTDTLSNGHKADLEAAKRLAKRLYNLDGFKKADVARHLGKNNEFSKMVAGEYLKFFVFTGMSLDQALRSFLKELALMGETQERERVLAHFSQRYYECNPTAISSEDGAHTLTCALMLLNTDLHGHNIGKRMSCSDFICNLEGLNGGTDFPKELLKALYGSIKNEKLQWAIDEEELRKSLSELADPNPKSIKRISSCSNPFLDFSQDSSIATYKHGLLVRKIHADPDCKKTPRGKRGWKPFHAILKGMILYLQKEEYKPGKALAEEELKNAISIHHSLATQASDYSKRPNVFYLRTADWRVFLFQAQNPEQMHSWITRINVVAAMFSAPPFPAAIGSQKKFSRPLLPSSCTRLSQEEQVKSHETKFKSMSAELLEHRSSLPEKKVKGKEYEELKQKEEYLEFEKSRYGTYAMLLRAKLKAGSEDLAAFESTLFEAAGGEDEGLKKSHSSPSLNAEPPSTATKVKRNVSERAGRQPPAQPQKA
SIO_010081: PSD
subclass of: SO_0000673
so part of: PSD
location: join(511167..511937,512017..512119,512650..513097,517344..517778,524475..524669,525123..525203,525743..525855,526239..526297,526758..526847,535974..536017,537230..537408,538133..538203,538644..538801,539078..539222,539870..540013,540124..540363)
location: region:511167-540363:1
so has part: feature:511167-511937:1:exon
so has part: feature:512017-512119:1:exon
so has part: feature:512650-513097:1:exon
so has part: feature:517344-517778:1:exon
so has part: feature:524475-524669:1:exon
so has part: feature:525123-525203:1:exon
so has part: feature:525743-525855:1:exon
so has part: feature:526239-526297:1:exon
so has part: feature:526758-526847:1:exon
so has part: feature:535974-536017:1:exon
so has part: feature:537230-537408:1:exon
so has part: feature:538133-538203:1:exon
so has part: feature:538644-538801:1:exon
so has part: feature:539078-539222:1:exon
so has part: feature:539870-540013:1:exon
so has part: feature:540124-540363:1:exon

XP_008502242.2
type: Protein
SIO_000068: ncbiprotein

position:540363:1
position: 540363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511167-511937:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:512017-512119:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:512650-513097:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:517344-517778:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:524475-524669:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:525123-525203:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:525743-525855:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:526239-526297:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:526758-526847:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:535974-536017:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:537230-537408:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:538133-538203:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:538644-538801:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:539078-539222:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:539870-540013:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:540124-540363:1:exon

NFKB2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: NFKB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(541677..549372)
location: region:541677-549372:-1
so has part: feature:541677-549372:-1:exon
subclass of: SO_0000010

103537707
type: Gene
SIO_000068: ncbigene

position:541677:-1
position: 541677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549372:-1
position: 549372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541677-549372:-1:exon

NFKB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NFKB2
product: nuclear factor kappa B subunit 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030452913.1
SIO_010081: NFKB2
subclass of: SO_0000673
so part of: NFKB2
location: complement(join(541677..542233,542334..542445,542787..542959,543048..543117,543257..543480,543584..543686,543811..543980,544059..544266,544382..544496,544624..544765,544899..545081,545166..545285,545362..545500,545598..545683,545801..545905,545999..546157,546286..546392,546680..546831,547051..547149,547253..547293,547725..547803,548298..548342,549277..549372))
location: region:541677-549372:-1
so has part: feature:549277-549372:-1:exon
so has part: feature:548298-548342:-1:exon
so has part: feature:547725-547803:-1:exon
so has part: feature:547253-547293:-1:exon
so has part: feature:547051-547149:-1:exon
so has part: feature:546680-546831:-1:exon
so has part: feature:546286-546392:-1:exon
so has part: feature:545999-546157:-1:exon
so has part: feature:545801-545905:-1:exon
so has part: feature:545598-545683:-1:exon
so has part: feature:545362-545500:-1:exon
so has part: feature:545166-545285:-1:exon
so has part: feature:544899-545081:-1:exon
so has part: feature:544624-544765:-1:exon
so has part: feature:544382-544496:-1:exon
so has part: feature:544059-544266:-1:exon
so has part: feature:543811-543980:-1:exon
so has part: feature:543584-543686:-1:exon
so has part: feature:543257-543480:-1:exon
so has part: feature:543048-543117:-1:exon
so has part: feature:542787-542959:-1:exon
so has part: feature:542334-542445:-1:exon
so has part: feature:541677-542233:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:549277-549372:-1:exon

position:549277:-1
position: 549277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:548298-548342:-1:exon

position:548298:-1
position: 548298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548342:-1
position: 548342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:547725-547803:-1:exon

position:547725:-1
position: 547725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547803:-1
position: 547803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:547253-547293:-1:exon

position:547253:-1
position: 547253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547293:-1
position: 547293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:547051-547149:-1:exon

position:547051:-1
position: 547051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547149:-1
position: 547149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:546680-546831:-1:exon

position:546680:-1
position: 546680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546831:-1
position: 546831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:546286-546392:-1:exon

position:546286:-1
position: 546286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546392:-1
position: 546392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:545999-546157:-1:exon

position:545999:-1
position: 545999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546157:-1
position: 546157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:545801-545905:-1:exon

position:545801:-1
position: 545801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545905:-1
position: 545905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:545598-545683:-1:exon

position:545598:-1
position: 545598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545683:-1
position: 545683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:545362-545500:-1:exon

position:545362:-1
position: 545362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545500:-1
position: 545500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:545166-545285:-1:exon

position:545166:-1
position: 545166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545285:-1
position: 545285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:544899-545081:-1:exon

position:544899:-1
position: 544899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545081:-1
position: 545081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:544624-544765:-1:exon

position:544624:-1
position: 544624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544765:-1
position: 544765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:544382-544496:-1:exon

position:544382:-1
position: 544382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544496:-1
position: 544496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:544059-544266:-1:exon

position:544059:-1
position: 544059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544266:-1
position: 544266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:543811-543980:-1:exon

position:543811:-1
position: 543811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543980:-1
position: 543980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:543584-543686:-1:exon

position:543584:-1
position: 543584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543686:-1
position: 543686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:543257-543480:-1:exon

position:543257:-1
position: 543257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543480:-1
position: 543480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:543048-543117:-1:exon

position:543048:-1
position: 543048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543117:-1
position: 543117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:542787-542959:-1:exon

position:542787:-1
position: 542787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542959:-1
position: 542959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:542334-542445:-1:exon

position:542334:-1
position: 542334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542445:-1
position: 542445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:541677-542233:-1:exon

position:542233:-1
position: 542233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NFKB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NFKB2
product: nuclear factor kappa B subunit 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030452915.1
SIO_010081: NFKB2
subclass of: SO_0000673
so part of: NFKB2
location: complement(join(541677..542233,542334..542445,542787..542959,543048..543117,543257..543480,543584..543686,543811..543980,544059..544266,544382..544496,544624..544765,544899..545081,545166..545285,545362..545500,545598..545683,545801..545905,545999..546157,546286..546392,546680..546831,547051..547149,547253..547293,547725..547803,548298..548412,549277..549310))
location: region:541677-549310:-1
so has part: feature:549277-549310:-1:exon
so has part: feature:548298-548412:-1:exon
so has part: feature:547725-547803:-1:exon
so has part: feature:547253-547293:-1:exon
so has part: feature:547051-547149:-1:exon
so has part: feature:546680-546831:-1:exon
so has part: feature:546286-546392:-1:exon
so has part: feature:545999-546157:-1:exon
so has part: feature:545801-545905:-1:exon
so has part: feature:545598-545683:-1:exon
so has part: feature:545362-545500:-1:exon
so has part: feature:545166-545285:-1:exon
so has part: feature:544899-545081:-1:exon
so has part: feature:544624-544765:-1:exon
so has part: feature:544382-544496:-1:exon
so has part: feature:544059-544266:-1:exon
so has part: feature:543811-543980:-1:exon
so has part: feature:543584-543686:-1:exon
so has part: feature:543257-543480:-1:exon
so has part: feature:543048-543117:-1:exon
so has part: feature:542787-542959:-1:exon
so has part: feature:542334-542445:-1:exon
so has part: feature:541677-542233:-1:exon

position:549310:-1
position: 549310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549277-549310:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:548298-548412:-1:exon

position:548412:-1
position: 548412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:547725-547803:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:547253-547293:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:547051-547149:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:546680-546831:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:546286-546392:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:545999-546157:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:545801-545905:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:545598-545683:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:545362-545500:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:545166-545285:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:544899-545081:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:544624-544765:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:544382-544496:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:544059-544266:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:543811-543980:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:543584-543686:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:543257-543480:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:543048-543117:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:542787-542959:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:542334-542445:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:541677-542233:-1:exon

NFKB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NFKB2
product: nuclear factor kappa B subunit 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030452912.1
SIO_010081: NFKB2
subclass of: SO_0000673
so part of: NFKB2
location: complement(join(541677..542233,542334..542445,542787..542959,543048..543117,543257..543480,543584..543686,543811..543980,544059..544266,544382..544496,544624..544765,544899..545081,545166..545285,545362..545500,545598..545683,545801..545905,545999..546157,546286..546392,546680..546831,547051..547149,547253..547293,547725..547803,548298..548342,549042..549125))
location: region:541677-549125:-1
so has part: feature:549042-549125:-1:exon
so has part: feature:548298-548342:-1:exon
so has part: feature:547725-547803:-1:exon
so has part: feature:547253-547293:-1:exon
so has part: feature:547051-547149:-1:exon
so has part: feature:546680-546831:-1:exon
so has part: feature:546286-546392:-1:exon
so has part: feature:545999-546157:-1:exon
so has part: feature:545801-545905:-1:exon
so has part: feature:545598-545683:-1:exon
so has part: feature:545362-545500:-1:exon
so has part: feature:545166-545285:-1:exon
so has part: feature:544899-545081:-1:exon
so has part: feature:544624-544765:-1:exon
so has part: feature:544382-544496:-1:exon
so has part: feature:544059-544266:-1:exon
so has part: feature:543811-543980:-1:exon
so has part: feature:543584-543686:-1:exon
so has part: feature:543257-543480:-1:exon
so has part: feature:543048-543117:-1:exon
so has part: feature:542787-542959:-1:exon
so has part: feature:542334-542445:-1:exon
so has part: feature:541677-542233:-1:exon

position:549125:-1
position: 549125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549042-549125:-1:exon

position:549042:-1
position: 549042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:548298-548342:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:547725-547803:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:547253-547293:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:547051-547149:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:546680-546831:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:546286-546392:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:545999-546157:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:545801-545905:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:545598-545683:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:545362-545500:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:545166-545285:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:544899-545081:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:544624-544765:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:544382-544496:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:544059-544266:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:543811-543980:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:543584-543686:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:543257-543480:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:543048-543117:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:542787-542959:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:542334-542445:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:541677-542233:-1:exon

NFKB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NFKB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor NF-kappa-B p100 subunit isoform X2
translation: MLGLDGLLRPASSSPPGGRPRADMDEQFQPCLDGLDYDDFNFGPHMVEQKEPLMETVEGPYLVIIEQPKQRGFRFRYGCEGPSHGGLPGASSEKGRKTYPTVKICNYNGMARIEVDLVTHSDPPRVHAHSLVGKQCNEAGNCVAIVGPKDMTAQFSNLGVLHVTKKNMMEIMKEKLKQQKMRNRSHHLTEVELREIELEAKELKKVMDLSIVRLRFTAYLRDSSGNFTLALQPVISDPIHDSKSPGASNLKISRMDKTAGSVRGGDEVYLLCDKVQKDDIEVRFYEDDENGWQAFGDFSPTDVHKQYAIVFRTPPYHKPKIDRPVTVFLQLKRKRGGDVSDPKQFTYYPVVEDKEEVERKRKKVLPQFPQHFGGGSHMGGAGGGAGGFGSGGGGSLSFPYSPGLAYNSIYSPGPHPVGGYQGGVQMKGPEAEGSGNEGQSPPESTNCKELQQHAQLCQLWMLALAHGNAHALLDYSVTADPRVLLAVQRHLAATQDENGDTPLHLAIIHEQTAVIKQLIEVIASIPSQQIINISNNLQQTPLHLAVITKQPQVVQLLLQAHADPTLLDRYGNSLLHLALQAGDEEVLRTLLSHLGSAAPYLLRLPNFHGLLPVHLAVKAKSLSCLELLVRKGADVNAVERQGGRTPLHLAVEMENLNMATHLVKKLGADVNSRTFAGNTPLHLAAGLGCPTLTKLLLKAGADVLCENDEPISPSSSEASSDTDADCEEQEVAMELGGSPMAVEPCSDPQPPALGQAEHRQRRCHLPLDLTQSQKVREILLQASQHRPEAELPAAPQPGKVLSLDTEALQGLEQLLNQDCSGSDWIELAKRLGLCSLVETYKATPSPSLSLLRSYELAGGSLGGLLEALDSMGLRNAVRMLHKTEALEKLQSTELKEDSAYGSQSVEEGQVPTTLALKPGGELPHSQQPQVH
SIO_010081: NFKB2
subclass of: SO_0000673
so part of: NFKB2
location: complement(join(542115..542233,542334..542445,542787..542959,543048..543117,543257..543480,543584..543686,543811..543980,544059..544266,544382..544496,544624..544765,544899..545081,545166..545285,545362..545500,545598..545683,545801..545905,545999..546157,546286..546392,546680..546831,547051..547149,547253..547293,547725..547803,548298..548342,549277..549321))
location: region:542115-549321:-1
so has part: feature:549277-549321:-1:exon
so has part: feature:548298-548342:-1:exon
so has part: feature:547725-547803:-1:exon
so has part: feature:547253-547293:-1:exon
so has part: feature:547051-547149:-1:exon
so has part: feature:546680-546831:-1:exon
so has part: feature:546286-546392:-1:exon
so has part: feature:545999-546157:-1:exon
so has part: feature:545801-545905:-1:exon
so has part: feature:545598-545683:-1:exon
so has part: feature:545362-545500:-1:exon
so has part: feature:545166-545285:-1:exon
so has part: feature:544899-545081:-1:exon
so has part: feature:544624-544765:-1:exon
so has part: feature:544382-544496:-1:exon
so has part: feature:544059-544266:-1:exon
so has part: feature:543811-543980:-1:exon
so has part: feature:543584-543686:-1:exon
so has part: feature:543257-543480:-1:exon
so has part: feature:543048-543117:-1:exon
so has part: feature:542787-542959:-1:exon
so has part: feature:542334-542445:-1:exon
so has part: feature:542115-542233:-1:exon

XP_030308773.1
type: Protein
SIO_000068: ncbiprotein

position:542115:-1
position: 542115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549321:-1
position: 549321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549277-549321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:548298-548342:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:547725-547803:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:547253-547293:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:547051-547149:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:546680-546831:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:546286-546392:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:545999-546157:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:545801-545905:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:545598-545683:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:545362-545500:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:545166-545285:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:544899-545081:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:544624-544765:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:544382-544496:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:544059-544266:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:543811-543980:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:543584-543686:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:543257-543480:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:543048-543117:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:542787-542959:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:542334-542445:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:542115-542233:-1:exon

NFKB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NFKB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor NF-kappa-B p100 subunit isoform X1
translation: MGTRMANVSLGPAPQEGCRGCCPGGRPRADMDEQFQPCLDGLDYDDFNFGPHMVEQKEPLMETVEGPYLVIIEQPKQRGFRFRYGCEGPSHGGLPGASSEKGRKTYPTVKICNYNGMARIEVDLVTHSDPPRVHAHSLVGKQCNEAGNCVAIVGPKDMTAQFSNLGVLHVTKKNMMEIMKEKLKQQKMRNRSHHLTEVELREIELEAKELKKVMDLSIVRLRFTAYLRDSSGNFTLALQPVISDPIHDSKSPGASNLKISRMDKTAGSVRGGDEVYLLCDKVQKDDIEVRFYEDDENGWQAFGDFSPTDVHKQYAIVFRTPPYHKPKIDRPVTVFLQLKRKRGGDVSDPKQFTYYPVVEDKEEVERKRKKVLPQFPQHFGGGSHMGGAGGGAGGFGSGGGGSLSFPYSPGLAYNSIYSPGPHPVGGYQGGVQMKGPEAEGSGNEGQSPPESTNCKELQQHAQLCQLWMLALAHGNAHALLDYSVTADPRVLLAVQRHLAATQDENGDTPLHLAIIHEQTAVIKQLIEVIASIPSQQIINISNNLQQTPLHLAVITKQPQVVQLLLQAHADPTLLDRYGNSLLHLALQAGDEEVLRTLLSHLGSAAPYLLRLPNFHGLLPVHLAVKAKSLSCLELLVRKGADVNAVERQGGRTPLHLAVEMENLNMATHLVKKLGADVNSRTFAGNTPLHLAAGLGCPTLTKLLLKAGADVLCENDEPISPSSSEASSDTDADCEEQEVAMELGGSPMAVEPCSDPQPPALGQAEHRQRRCHLPLDLTQSQKVREILLQASQHRPEAELPAAPQPGKVLSLDTEALQGLEQLLNQDCSGSDWIELAKRLGLCSLVETYKATPSPSLSLLRSYELAGGSLGGLLEALDSMGLRNAVRMLHKTEALEKLQSTELKEDSAYGSQSVEEGQVPTTLALKPGGELPHSQQPQVH
SIO_010081: NFKB2
subclass of: SO_0000673
so part of: NFKB2
location: complement(join(542115..542233,542334..542445,542787..542959,543048..543117,543257..543480,543584..543686,543811..543980,544059..544266,544382..544496,544624..544765,544899..545081,545166..545285,545362..545500,545598..545683,545801..545905,545999..546157,546286..546392,546680..546831,547051..547149,547253..547293,547725..547803,548298..548342,549042..549107))
location: region:542115-549107:-1
so has part: feature:549042-549107:-1:exon
so has part: feature:548298-548342:-1:exon
so has part: feature:547725-547803:-1:exon
so has part: feature:547253-547293:-1:exon
so has part: feature:547051-547149:-1:exon
so has part: feature:546680-546831:-1:exon
so has part: feature:546286-546392:-1:exon
so has part: feature:545999-546157:-1:exon
so has part: feature:545801-545905:-1:exon
so has part: feature:545598-545683:-1:exon
so has part: feature:545362-545500:-1:exon
so has part: feature:545166-545285:-1:exon
so has part: feature:544899-545081:-1:exon
so has part: feature:544624-544765:-1:exon
so has part: feature:544382-544496:-1:exon
so has part: feature:544059-544266:-1:exon
so has part: feature:543811-543980:-1:exon
so has part: feature:543584-543686:-1:exon
so has part: feature:543257-543480:-1:exon
so has part: feature:543048-543117:-1:exon
so has part: feature:542787-542959:-1:exon
so has part: feature:542334-542445:-1:exon
so has part: feature:542115-542233:-1:exon

XP_030308772.1
type: Protein
SIO_000068: ncbiprotein

position:549107:-1
position: 549107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549042-549107:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:548298-548342:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:547725-547803:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:547253-547293:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:547051-547149:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:546680-546831:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:546286-546392:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:545999-546157:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:545801-545905:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:545598-545683:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:545362-545500:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:545166-545285:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:544899-545081:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:544624-544765:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:544382-544496:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:544059-544266:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:543811-543980:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:543584-543686:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:543257-543480:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:543048-543117:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:542787-542959:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:542334-542445:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:542115-542233:-1:exon

NFKB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NFKB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor NF-kappa-B p100 subunit isoform X3
translation: MDEQFQPCLDGLDYDDFNFGPHMVEQKEPLMETVEGPYLVIIEQPKQRGFRFRYGCEGPSHGGLPGASSEKGRKTYPTVKICNYNGMARIEVDLVTHSDPPRVHAHSLVGKQCNEAGNCVAIVGPKDMTAQFSNLGVLHVTKKNMMEIMKEKLKQQKMRNRSHHLTEVELREIELEAKELKKVMDLSIVRLRFTAYLRDSSGNFTLALQPVISDPIHDSKSPGASNLKISRMDKTAGSVRGGDEVYLLCDKVQKDDIEVRFYEDDENGWQAFGDFSPTDVHKQYAIVFRTPPYHKPKIDRPVTVFLQLKRKRGGDVSDPKQFTYYPVVEDKEEVERKRKKVLPQFPQHFGGGSHMGGAGGGAGGFGSGGGGSLSFPYSPGLAYNSIYSPGPHPVGGYQGGVQMKGPEAEGSGNEGQSPPESTNCKELQQHAQLCQLWMLALAHGNAHALLDYSVTADPRVLLAVQRHLAATQDENGDTPLHLAIIHEQTAVIKQLIEVIASIPSQQIINISNNLQQTPLHLAVITKQPQVVQLLLQAHADPTLLDRYGNSLLHLALQAGDEEVLRTLLSHLGSAAPYLLRLPNFHGLLPVHLAVKAKSLSCLELLVRKGADVNAVERQGGRTPLHLAVEMENLNMATHLVKKLGADVNSRTFAGNTPLHLAAGLGCPTLTKLLLKAGADVLCENDEPISPSSSEASSDTDADCEEQEVAMELGGSPMAVEPCSDPQPPALGQAEHRQRRCHLPLDLTQSQKVREILLQASQHRPEAELPAAPQPGKVLSLDTEALQGLEQLLNQDCSGSDWIELAKRLGLCSLVETYKATPSPSLSLLRSYELAGGSLGGLLEALDSMGLRNAVRMLHKTEALEKLQSTELKEDSAYGSQSVEEGQVPTTLALKPGGELPHSQQPQVH
SIO_010081: NFKB2
subclass of: SO_0000673
so part of: NFKB2
location: complement(join(542115..542233,542334..542445,542787..542959,543048..543117,543257..543480,543584..543686,543811..543980,544059..544266,544382..544496,544624..544765,544899..545081,545166..545285,545362..545500,545598..545683,545801..545905,545999..546157,546286..546392,546680..546831,547051..547149,547253..547293,547725..547803,548298..548318))
location: region:542115-548318:-1
so has part: feature:548298-548318:-1:exon
so has part: feature:547725-547803:-1:exon
so has part: feature:547253-547293:-1:exon
so has part: feature:547051-547149:-1:exon
so has part: feature:546680-546831:-1:exon
so has part: feature:546286-546392:-1:exon
so has part: feature:545999-546157:-1:exon
so has part: feature:545801-545905:-1:exon
so has part: feature:545598-545683:-1:exon
so has part: feature:545362-545500:-1:exon
so has part: feature:545166-545285:-1:exon
so has part: feature:544899-545081:-1:exon
so has part: feature:544624-544765:-1:exon
so has part: feature:544382-544496:-1:exon
so has part: feature:544059-544266:-1:exon
so has part: feature:543811-543980:-1:exon
so has part: feature:543584-543686:-1:exon
so has part: feature:543257-543480:-1:exon
so has part: feature:543048-543117:-1:exon
so has part: feature:542787-542959:-1:exon
so has part: feature:542334-542445:-1:exon
so has part: feature:542115-542233:-1:exon

XP_030308775.1
type: Protein
SIO_000068: ncbiprotein

position:548318:-1
position: 548318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548298-548318:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:547725-547803:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:547253-547293:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:547051-547149:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:546680-546831:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:546286-546392:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:545999-546157:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:545801-545905:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:545598-545683:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:545362-545500:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:545166-545285:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:544899-545081:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:544624-544765:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:544382-544496:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:544059-544266:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:543811-543980:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:543584-543686:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:543257-543480:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:543048-543117:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:542787-542959:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:542334-542445:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:542115-542233:-1:exon

TMEM150A
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: TMEM150A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(552535..558910)
location: region:552535-558910:-1
so has part: feature:552535-558910:-1:exon
subclass of: SO_0000010

103537708
type: Gene
SIO_000068: ncbigene

position:552535:-1
position: 552535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558910:-1
position: 558910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552535-558910:-1:exon

TMEM150A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TMEM150A
product: transmembrane protein 150A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030452926.1
SIO_010081: TMEM150A
subclass of: SO_0000673
so part of: TMEM150A
location: complement(join(552535..553593,554230..554329,554701..554828,554920..554987,555127..555198,557500..557547,558785..558910))
location: region:552535-558910:-1
so has part: feature:558785-558910:-1:exon
so has part: feature:557500-557547:-1:exon
so has part: feature:555127-555198:-1:exon
so has part: feature:554920-554987:-1:exon
so has part: feature:554701-554828:-1:exon
so has part: feature:554230-554329:-1:exon
so has part: feature:552535-553593:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:558785-558910:-1:exon

position:558785:-1
position: 558785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:557500-557547:-1:exon

position:557500:-1
position: 557500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:557547:-1
position: 557547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:555127-555198:-1:exon

position:555127:-1
position: 555127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555198:-1
position: 555198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:554920-554987:-1:exon

position:554920:-1
position: 554920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554987:-1
position: 554987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:554701-554828:-1:exon

position:554701:-1
position: 554701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554828:-1
position: 554828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:554230-554329:-1:exon

position:554230:-1
position: 554230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554329:-1
position: 554329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:552535-553593:-1:exon

position:553593:-1
position: 553593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM150A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TMEM150A
product: transmembrane protein 150A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030452925.1
SIO_010081: TMEM150A
subclass of: SO_0000673
so part of: TMEM150A
location: complement(join(552539..553593,554230..554407,554701..554828,554920..554987,555127..555198,557500..557547,558785..558910))
location: region:552539-558910:-1
so has part: feature:558785-558910:-1:exon
so has part: feature:557500-557547:-1:exon
so has part: feature:555127-555198:-1:exon
so has part: feature:554920-554987:-1:exon
so has part: feature:554701-554828:-1:exon
so has part: feature:554230-554407:-1:exon
so has part: feature:552539-553593:-1:exon

position:552539:-1
position: 552539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558785-558910:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:557500-557547:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555127-555198:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:554920-554987:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:554701-554828:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:554230-554407:-1:exon

position:554407:-1
position: 554407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:552539-553593:-1:exon

TMEM150A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TMEM150A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 150A isoform X2
translation: MPGPRMPAWGILPVTLPAFTITGMWIVYAMALSNNHICPVHNWNYNQSCGVDGPGSCCTLDHIPLVSKCGTLPPESCFFSLICSLGSFMVILVGLLRYAHLLERLGPSLLNTLGLATGWVCAAGLTMVGNFQSVLTYRMARTRGQYWTGHLRSILTTVAFITLVFSGVFFIQESFVLQHVAALCEWVFIIDVLVFYGTFTFEFGAISTDTFLVLLKASRAPKSYKGESSVSSTAHIHSLAEGLAMA
SIO_010081: TMEM150A
subclass of: SO_0000673
so part of: TMEM150A
location: complement(join(553349..553593,554230..554329,554701..554828,554920..554987,555127..555198,557500..557547,558785..558864))
location: region:553349-558864:-1
so has part: feature:558785-558864:-1:exon
so has part: feature:557500-557547:-1:exon
so has part: feature:555127-555198:-1:exon
so has part: feature:554920-554987:-1:exon
so has part: feature:554701-554828:-1:exon
so has part: feature:554230-554329:-1:exon
so has part: feature:553349-553593:-1:exon

XP_030308786.1
type: Protein
SIO_000068: ncbiprotein

position:553349:-1
position: 553349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558864:-1
position: 558864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558785-558864:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:557500-557547:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555127-555198:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:554920-554987:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:554701-554828:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:554230-554329:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553349-553593:-1:exon

TMEM150A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TMEM150A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 150A isoform X1
translation: MPGPRMPAWGILPVTLPAFTITGMWIVYAMALSNNHICPVHNWNYNQSCGVDGPGSCCTLDHIPLVSKCGTLPPESCFFSLICSLGSFMVILVGLLRYAHLLERLGPSLLNTLGLATGWVCAAGLTMVGNFQVDHAKVLHYIGAGVAFPTSMLFLLLQSVLTYRMARTRGQYWTGHLRSILTTVAFITLVFSGVFFIQESFVLQHVAALCEWVFIIDVLVFYGTFTFEFGAISTDTFLVLLKASRAPKSYKGESSVSSTAHIHSLAEGLAMA
SIO_010081: TMEM150A
subclass of: SO_0000673
so part of: TMEM150A
location: complement(join(553349..553593,554230..554407,554701..554828,554920..554987,555127..555198,557500..557547,558785..558864))
location: region:553349-558864:-1
so has part: feature:558785-558864:-1:exon
so has part: feature:557500-557547:-1:exon
so has part: feature:555127-555198:-1:exon
so has part: feature:554920-554987:-1:exon
so has part: feature:554701-554828:-1:exon
so has part: feature:554230-554407:-1:exon
so has part: feature:553349-553593:-1:exon

XP_030308785.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:558785-558864:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:557500-557547:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555127-555198:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:554920-554987:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:554701-554828:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:554230-554407:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553349-553593:-1:exon

GBF1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: GBF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(561253..642035)
location: region:561253-642035:-1
so has part: feature:561253-642035:-1:exon
subclass of: SO_0000010

103537709
type: Gene
SIO_000068: ncbigene

position:561253:-1
position: 561253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:642035:-1
position: 642035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:561253-642035:-1:exon

GBF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: GBF1
product: golgi brefeldin A resistant guanine nucleotide exchange factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 5 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030452909.1
SIO_010081: GBF1
subclass of: SO_0000673
so part of: GBF1
location: complement(join(561253..562848,563157..563294,563475..563652,563858..563971,564524..564625,564957..565087,565451..565601,566251..566450,566890..567136,567431..567594,568746..568968,569186..569339,569778..569872,570645..570716,571310..571433,571518..571582,572045..572221,574324..574417,574930..575166,576372..576454,576932..577057,577343..577466,577908..578110,579221..579309,579783..579923,580362..580548,580713..580907,581296..581394,581941..582152,582292..582460,583151..583380,584095..584230,589690..589744,591430..591490,591843..591951,592543..592661,596413..596544,636340..636406,637329..637434,641783..642030))
location: region:561253-642030:-1
so has part: feature:641783-642030:-1:exon
so has part: feature:637329-637434:-1:exon
so has part: feature:636340-636406:-1:exon
so has part: feature:596413-596544:-1:exon
so has part: feature:592543-592661:-1:exon
so has part: feature:591843-591951:-1:exon
so has part: feature:591430-591490:-1:exon
so has part: feature:589690-589744:-1:exon
so has part: feature:584095-584230:-1:exon
so has part: feature:583151-583380:-1:exon
so has part: feature:582292-582460:-1:exon
so has part: feature:581941-582152:-1:exon
so has part: feature:581296-581394:-1:exon
so has part: feature:580713-580907:-1:exon
so has part: feature:580362-580548:-1:exon
so has part: feature:579783-579923:-1:exon
so has part: feature:579221-579309:-1:exon
so has part: feature:577908-578110:-1:exon
so has part: feature:577343-577466:-1:exon
so has part: feature:576932-577057:-1:exon
so has part: feature:576372-576454:-1:exon
so has part: feature:574930-575166:-1:exon
so has part: feature:574324-574417:-1:exon
so has part: feature:572045-572221:-1:exon
so has part: feature:571518-571582:-1:exon
so has part: feature:571310-571433:-1:exon
so has part: feature:570645-570716:-1:exon
so has part: feature:569778-569872:-1:exon
so has part: feature:569186-569339:-1:exon
so has part: feature:568746-568968:-1:exon
so has part: feature:567431-567594:-1:exon
so has part: feature:566890-567136:-1:exon
so has part: feature:566251-566450:-1:exon
so has part: feature:565451-565601:-1:exon
so has part: feature:564957-565087:-1:exon
so has part: feature:564524-564625:-1:exon
so has part: feature:563858-563971:-1:exon
so has part: feature:563475-563652:-1:exon
so has part: feature:563157-563294:-1:exon
so has part: feature:561253-562848:-1:exon

position:642030:-1
position: 642030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641783-642030:-1:exon

position:641783:-1
position: 641783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:637329-637434:-1:exon

position:637329:-1
position: 637329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:637434:-1
position: 637434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:636340-636406:-1:exon

position:636340:-1
position: 636340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636406:-1
position: 636406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:596413-596544:-1:exon

position:596413:-1
position: 596413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596544:-1
position: 596544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:592543-592661:-1:exon

position:592543:-1
position: 592543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592661:-1
position: 592661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:591843-591951:-1:exon

position:591843:-1
position: 591843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591951:-1
position: 591951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:591430-591490:-1:exon

position:591430:-1
position: 591430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591490:-1
position: 591490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:589690-589744:-1:exon

position:589690:-1
position: 589690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589744:-1
position: 589744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:584095-584230:-1:exon

position:584095:-1
position: 584095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584230:-1
position: 584230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:583151-583380:-1:exon

position:583151:-1
position: 583151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583380:-1
position: 583380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:582292-582460:-1:exon

position:582292:-1
position: 582292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582460:-1
position: 582460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:581941-582152:-1:exon

position:581941:-1
position: 581941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582152:-1
position: 582152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:581296-581394:-1:exon

position:581296:-1
position: 581296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581394:-1
position: 581394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:580713-580907:-1:exon

position:580713:-1
position: 580713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580907:-1
position: 580907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:580362-580548:-1:exon

position:580362:-1
position: 580362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580548:-1
position: 580548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:579783-579923:-1:exon

position:579783:-1
position: 579783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579923:-1
position: 579923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:579221-579309:-1:exon

position:579221:-1
position: 579221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579309:-1
position: 579309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:577908-578110:-1:exon

position:577908:-1
position: 577908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578110:-1
position: 578110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:577343-577466:-1:exon

position:577343:-1
position: 577343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577466:-1
position: 577466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:576932-577057:-1:exon

position:576932:-1
position: 576932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577057:-1
position: 577057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:576372-576454:-1:exon

position:576372:-1
position: 576372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576454:-1
position: 576454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:574930-575166:-1:exon

position:574930:-1
position: 574930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575166:-1
position: 575166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:574324-574417:-1:exon

position:574324:-1
position: 574324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574417:-1
position: 574417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:572045-572221:-1:exon

position:572045:-1
position: 572045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572221:-1
position: 572221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:571518-571582:-1:exon

position:571518:-1
position: 571518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:571582:-1
position: 571582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:571310-571433:-1:exon

position:571310:-1
position: 571310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:571433:-1
position: 571433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:570645-570716:-1:exon

position:570645:-1
position: 570645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:570716:-1
position: 570716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:569778-569872:-1:exon

position:569778:-1
position: 569778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569872:-1
position: 569872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:569186-569339:-1:exon

position:569186:-1
position: 569186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569339:-1
position: 569339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:568746-568968:-1:exon

position:568746:-1
position: 568746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568968:-1
position: 568968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:567431-567594:-1:exon

position:567431:-1
position: 567431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567594:-1
position: 567594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:566890-567136:-1:exon

position:566890:-1
position: 566890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567136:-1
position: 567136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:566251-566450:-1:exon

position:566251:-1
position: 566251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:566450:-1
position: 566450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:565451-565601:-1:exon

position:565451:-1
position: 565451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565601:-1
position: 565601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:564957-565087:-1:exon

position:564957:-1
position: 564957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565087:-1
position: 565087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:564524-564625:-1:exon

position:564524:-1
position: 564524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564625:-1
position: 564625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:563858-563971:-1:exon

position:563858:-1
position: 563858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563971:-1
position: 563971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:563475-563652:-1:exon

position:563475:-1
position: 563475
reference: sequence
type: ReverseStrandPosition
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position:563652:-1
position: 563652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:563157-563294:-1:exon

position:563157:-1
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reference: sequence
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position:563294:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 40
SIO_000628: feature:561253-562848:-1:exon

position:562848:-1
position: 562848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GBF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: GBF1
product: golgi brefeldin A resistant guanine nucleotide exchange factor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 3 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030452911.1
SIO_010081: GBF1
subclass of: SO_0000673
so part of: GBF1
location: complement(join(561253..562848,563157..563294,563475..563652,563858..563971,564524..564625,564957..565087,565451..565601,566251..566450,566890..567136,567431..567594,568746..568968,569186..569339,569778..569872,570645..570716,571310..571433,571518..571582,572045..572221,574324..574417,574930..575166,576372..576454,576932..577057,577343..577466,577908..578110,579221..579309,579783..579923,580362..580548,580713..580907,581941..582152,582292..582460,583151..583380,584095..584230,589690..589744,591430..591490,591843..591951,592543..592661,596413..596544,636340..636406,637329..637434,641783..642024))
location: region:561253-642024:-1
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position:642024:-1
position: 642024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641783-642024:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:637329-637434:-1:exon

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SIO_000300: 34
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urn:…
SIO_000300: 39
SIO_000628: feature:561253-562848:-1:exon

GBF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: GBF1
product: golgi brefeldin A resistant guanine nucleotide exchange factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 6 long SRA reads, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_030452910.1
SIO_010081: GBF1
subclass of: SO_0000673
so part of: GBF1
location: complement(join(562376..562848,563157..563294,563475..563652,563858..563971,564524..564625,564957..565087,565451..565601,566263..566450,566890..567136,567431..567594,568746..568968,569186..569339,569778..569872,570645..570716,571310..571433,571518..571582,572045..572221,574324..574417,574930..575166,576372..576454,576932..577057,577343..577466,577908..578110,579221..579309,579783..579923,580362..580548,580713..580907,581296..581394,581941..582152,582292..582460,583151..583380,584095..584230,589690..589744,591430..591490,591843..591951,592543..592661,596413..596544,636340..636406,637329..637434,641783..642035))
location: region:562376-642035:-1
so has part: feature:641783-642035:-1:exon
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position:562376:-1
position: 562376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641783-642035:-1:exon

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SIO_000300: 2
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SIO_000300: 3
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SIO_000628: feature:574324-574417:-1:exon

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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 32
SIO_000628: feature:566890-567136:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:566263-566450:-1:exon

position:566263:-1
position: 566263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:565451-565601:-1:exon

urn:…
SIO_000300: 35
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urn:…
SIO_000300: 36
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urn:…
SIO_000300: 37
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urn:…
SIO_000300: 38
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urn:…
SIO_000300: 39
SIO_000628: feature:563157-563294:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:562376-562848:-1:exon

GBF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: GBF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X3
translation: MRGTARMVDKNIYIVQGEINAVVGAIKRNARWSTHTHLDEERDPLLHSFSLLKEVLNNIRELSEIEPNVFLRPFLEVIRSEDTTGPITGLALTSVNKFLSYALIDPSHEGTAEGMENMADAVTHARFVGTDHASDEVVLMKILQVLRTLLLTPVGAHLTNESVCEIMQSCFRICFEMRLSELLRKSAEHTLVDMVQLLFTRLPQFKEEPKSYMGTNMKKLKMRAGGMSESSKWKKQKRSPRPPRHVTKVSPGAEQPAASAGNITASGVSFIDAPSPSSSGCSENVSSAVSPSTDSGMELSSQTTSKEDLTDLDQVTSLGLSAGMPSNEAKIPENQNQPELQSESLREEKIQSASVESIPEVLEECTSVAEHSDSASVHDMDYVNPRGVRFTQSSQKEGAALVPYGLPCIRELFRFLISLTNPHDRHNSEVMIHMGLQLLTVALEAAPIANCQSLLGLVKEELCRHLFQMYIKKLMEIITVENPKMPYEMKEMALEAIVQLWRIPSFVTELYLNYDCDYYCANLFEELTKLLSKNAFPVSGQLYTVHLLSLEALLTVIDSTEAHCQAKVLSNMHQQEKEVVKSSPENMNSTKETSNNHERVVPEGKSSSAVPEPAGACPPTSGCLMADQMKESCMDLEGAIQAAEKNIPRKPTRFSCVLPSPQELMQIKNKKKLLITGTEQFNQKPRKGIQFLQEKNLLATPIDNNEVARWLRENPRLDKKMIGEFVSDRKNIDLLESFVGTFSFQGLRLDEALRLYLEAFRLPGEAPVIQRLLEAFTEHWRKSNGSPFANSDACFALAYAVIMLNTDQHNHNVRKQNVPMTLEEFRKNLKGVNGGKDFEQDILEDMYHAIKNDEIVMPEEQTGLVKENYIWNVLLHRGATDEGIFLHVPPGSYDHDLFTMTWGPTIAALSYVFDKSLEETIIQKAISGFRKCAMISAHYGLSDVFDNLIISLCKFTALSSESIENLPTVFGSNPKAHIAAKTVFHLAHRHGDILREGWKNIMEAMLQLFRAELLPKAMVEVEDFVDPNGKIYLQREETPSNRGESTVLSFVSWLTLSGTEQSGMRGPSTETQEAKRAALECIKQCDPEKLITESKFLQLESLQELMKALISVTPDEETYDEEDAAFCLEMLLRIVLENRDRVTCVWQTVRDHLYHLCVHAMEFCFLVERAVVGLLRLAIRLLRREEISTQVLLSLRILLMMKPNVLSRVSHEVAYGLHELLKTNAANIHSGDDWYTLFTLLECIGSGVKPPAALQVTARADNDTGAQSDSEVSSSYHPSDMSLDRGYTSDSEVYTDHGKPGKMHRSGTDVDVMNSGWLVVGKDDIDTSRATAGHNKLGPSPLVNQYSLTVGLDLGPHDTKSLMKCVESLSFIVRDAAHVTPENFQLCVKTIRIFVEASLNGGYKSQEKRGKSHRYDSKSNRLKKKPKESSTRRSRALSQHQAHTHSDEEEDESIPASYHTVSLQVSQDLLDLMHTLHTRAATIYSSWAEEQRHLETAGRKIQADSRTLWSNCWCPLLQGIAWLCCDARRQVRMQALTYLQRALLVHDLQALDALEWESCFNKVLFPLLTKLLENISPADVGGMEETRMRASTLLSKVFLQHLSPLLSLTTFAALWLTILDFMDKYMHAGSSDLLLEAIPESLKNMLLVMDTAGIFHSADSRTGYSDLWEITWERIDCFLPRLRDELFKQAVIPDPVPSIPTEQQHQKSIVSALPPCPAGDVRPATHLAPLERPSELGASESERATAPASPTISTSASPPFPTAAPARTSPVTDIPPTTAQPPLILQPLASPLQVGVPPMTLPIILNPALIEATSPVPLLATPRPTDPMTTSEVN
SIO_010081: GBF1
subclass of: SO_0000673
so part of: GBF1
location: complement(join(562562..562848,563157..563294,563475..563652,563858..563971,564524..564625,564957..565087,565451..565601,566251..566450,566890..567136,567431..567594,568746..568968,569186..569339,569778..569872,570645..570716,571310..571433,571518..571582,572045..572221,574324..574417,574930..575166,576372..576454,576932..577057,577343..577466,577908..578110,579221..579309,579783..579923,580362..580548,580713..580907,581941..582152,582292..582460,583151..583380,584095..584230,589690..589744,591430..591490,591843..591951,592543..592661,596413..596544,636340..636406,637329..637434,641783..641790))
location: region:562562-641790:-1
so has part: feature:641783-641790:-1:exon
so has part: feature:637329-637434:-1:exon
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so has part: feature:579221-579309:-1:exon
so has part: feature:577908-578110:-1:exon
so has part: feature:577343-577466:-1:exon
so has part: feature:576932-577057:-1:exon
so has part: feature:576372-576454:-1:exon
so has part: feature:574930-575166:-1:exon
so has part: feature:574324-574417:-1:exon
so has part: feature:572045-572221:-1:exon
so has part: feature:571518-571582:-1:exon
so has part: feature:571310-571433:-1:exon
so has part: feature:570645-570716:-1:exon
so has part: feature:569778-569872:-1:exon
so has part: feature:569186-569339:-1:exon
so has part: feature:568746-568968:-1:exon
so has part: feature:567431-567594:-1:exon
so has part: feature:566890-567136:-1:exon
so has part: feature:566251-566450:-1:exon
so has part: feature:565451-565601:-1:exon
so has part: feature:564957-565087:-1:exon
so has part: feature:564524-564625:-1:exon
so has part: feature:563858-563971:-1:exon
so has part: feature:563475-563652:-1:exon
so has part: feature:563157-563294:-1:exon
so has part: feature:562562-562848:-1:exon

XP_030308771.1
type: Protein
SIO_000068: ncbiprotein

position:562562:-1
position: 562562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641790:-1
position: 641790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641783-641790:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:637329-637434:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:636340-636406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:596413-596544:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:592543-592661:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:591843-591951:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:591430-591490:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:589690-589744:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:584095-584230:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:583151-583380:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:582292-582460:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:581941-582152:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:580713-580907:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:580362-580548:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:579783-579923:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:579221-579309:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:577908-578110:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:577343-577466:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:576932-577057:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:576372-576454:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:574930-575166:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:574324-574417:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:572045-572221:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:571518-571582:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:571310-571433:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:570645-570716:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:569778-569872:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:569186-569339:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:568746-568968:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:567431-567594:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:566890-567136:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:566251-566450:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:565451-565601:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:564957-565087:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:564524-564625:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:563858-563971:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:563475-563652:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:563157-563294:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:562562-562848:-1:exon

GBF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: GBF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X2
translation: MRGTARMVDKNIYIVQGEINAVVGAIKRNARWSTHTHLDEERDPLLHSFSLLKEVLNNIRELSEIEPNVFLRPFLEVIRSEDTTGPITGLALTSVNKFLSYALIDPSHEGTAEGMENMADAVTHARFVGTDHASDEVVLMKILQVLRTLLLTPVGAHLTNESVCEIMQSCFRICFEMRLSELLRKSAEHTLVDMVQLLFTRLPQFKEEPKSYMGTNMKKLKMRAGGMSESSKWKKQKRSPRPPRHVTKVSPGAEQPAASAGNITASGVSFIDAPSPSSSGCSENVSSAVSPSTDSGMELSSQTTSKEDLTDLDQVTSLGLSAGMPSNEAKIPENQNQPELQSESLREEKIQSASVESIPEVLEECTSVAEHSDSASVHDMDYVNPRGVRFTQSSQKEGAALVPYGLPCIRELFRFLISLTNPHDRHNSEVMIHMGLQLLTVALEAAPIANCQSLLGLVKEELCRHLFQLLSVERLNLYAASLRVCFLLFESMREHLKFQLEMYIKKLMEIITVENPKMPYEMKEMALEAIVQLWRIPSFVTELYLNYDCDYYCANLFEELTKLLSKNAFPVSGQLYTVHLLSLEALLTVIDSTEAHCQAKVLSNMHQQEKEVVKSSPENMNSTKETSNNHERVVPEGKSSSAVPEPAGACPPTSGCLMADQMKESCMDLEGAIQAAEKNIPRKPTRFSCVLPSPQELMQIKNKKKLLITGTEQFNQKPRKGIQFLQEKNLLATPIDNNEVARWLRENPRLDKKMIGEFVSDRKNIDLLESFVGTFSFQGLRLDEALRLYLEAFRLPGEAPVIQRLLEAFTEHWRKSNGSPFANSDACFALAYAVIMLNTDQHNHNVRKQNVPMTLEEFRKNLKGVNGGKDFEQDILEDMYHAIKNDEIVMPEEQTGLVKENYIWNVLLHRGATDEGIFLHVPPGSYDHDLFTMTWGPTIAALSYVFDKSLEETIIQKAISGFRKCAMISAHYGLSDVFDNLIISLCKFTALSSESIENLPTVFGSNPKAHIAAKTVFHLAHRHGDILREGWKNIMEAMLQLFRAELLPKAMVEVEDFVDPNGKIYLQREETPSNRGESTVLSFVSWLTLSGTEQSGMRGPSTETQEAKRAALECIKQCDPEKLITESKFLQLESLQELMKALISVTPDEETYDEEDAAFCLEMLLRIVLENRDRVTCVWQTVRDHLYHLCVHAMEFCFLVERAVVGLLRLAIRLLRREEISTQVLLSLRILLMMKPNVLSRVSHEVAYGLHELLKTNAANIHSGDDWYTLFTLLECIGSGVKPPAALQVTARADNDTGAQSDSEVSSSYHPSDMSLDRGYTSDSEVYTDHGKPGKMHRSGTDVDVMNSGWLVVGKDDIDTSRATAGHNKLGPSPLVNQYSLTVGLDLGPHDTKSLMKCVESLSFIVRDAAHVTPENFQLCVKTIRIFVEASLNGGYKSQEKRGKSHRYDSKSNRLKKKPKESSTRRSRALSQHQAHTHSDEEEDESIPASYHTVSLQLLDLMHTLHTRAATIYSSWAEEQRHLETAGRKIQADSRTLWSNCWCPLLQGIAWLCCDARRQVRMQALTYLQRALLVHDLQALDALEWESCFNKVLFPLLTKLLENISPADVGGMEETRMRASTLLSKVFLQHLSPLLSLTTFAALWLTILDFMDKYMHAGSSDLLLEAIPESLKNMLLVMDTAGIFHSADSRTGYSDLWEITWERIDCFLPRLRDELFKQAVIPDPVPSIPTEQQHQKSIVSALPPCPAGDVRPATHLAPLERPSELGASESERATAPASPTISTSASPPFPTAAPARTSPVTDIPPTTAQPPLILQPLASPLQVGVPPMTLPIILNPALIEATSPVPLLATPRPTDPMTTSEVN
SIO_010081: GBF1
subclass of: SO_0000673
so part of: GBF1
location: complement(join(562562..562848,563157..563294,563475..563652,563858..563971,564524..564625,564957..565087,565451..565601,566263..566450,566890..567136,567431..567594,568746..568968,569186..569339,569778..569872,570645..570716,571310..571433,571518..571582,572045..572221,574324..574417,574930..575166,576372..576454,576932..577057,577343..577466,577908..578110,579221..579309,579783..579923,580362..580548,580713..580907,581296..581394,581941..582152,582292..582460,583151..583380,584095..584230,589690..589744,591430..591490,591843..591951,592543..592661,596413..596544,636340..636406,637329..637434,641783..641790))
location: region:562562-641790:-1
so has part: feature:641783-641790:-1:exon
so has part: feature:637329-637434:-1:exon
so has part: feature:636340-636406:-1:exon
so has part: feature:596413-596544:-1:exon
so has part: feature:592543-592661:-1:exon
so has part: feature:591843-591951:-1:exon
so has part: feature:591430-591490:-1:exon
so has part: feature:589690-589744:-1:exon
so has part: feature:584095-584230:-1:exon
so has part: feature:583151-583380:-1:exon
so has part: feature:582292-582460:-1:exon
so has part: feature:581941-582152:-1:exon
so has part: feature:581296-581394:-1:exon
so has part: feature:580713-580907:-1:exon
so has part: feature:580362-580548:-1:exon
so has part: feature:579783-579923:-1:exon
so has part: feature:579221-579309:-1:exon
so has part: feature:577908-578110:-1:exon
so has part: feature:577343-577466:-1:exon
so has part: feature:576932-577057:-1:exon
so has part: feature:576372-576454:-1:exon
so has part: feature:574930-575166:-1:exon
so has part: feature:574324-574417:-1:exon
so has part: feature:572045-572221:-1:exon
so has part: feature:571518-571582:-1:exon
so has part: feature:571310-571433:-1:exon
so has part: feature:570645-570716:-1:exon
so has part: feature:569778-569872:-1:exon
so has part: feature:569186-569339:-1:exon
so has part: feature:568746-568968:-1:exon
so has part: feature:567431-567594:-1:exon
so has part: feature:566890-567136:-1:exon
so has part: feature:566263-566450:-1:exon
so has part: feature:565451-565601:-1:exon
so has part: feature:564957-565087:-1:exon
so has part: feature:564524-564625:-1:exon
so has part: feature:563858-563971:-1:exon
so has part: feature:563475-563652:-1:exon
so has part: feature:563157-563294:-1:exon
so has part: feature:562562-562848:-1:exon

XP_030308770.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:641783-641790:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:637329-637434:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:636340-636406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:596413-596544:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:592543-592661:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:591843-591951:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:591430-591490:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:589690-589744:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:584095-584230:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:583151-583380:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:582292-582460:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:581941-582152:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:581296-581394:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:580713-580907:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:580362-580548:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:579783-579923:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:579221-579309:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:577908-578110:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:577343-577466:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:576932-577057:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:576372-576454:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:574930-575166:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:574324-574417:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:572045-572221:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:571518-571582:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:571310-571433:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:570645-570716:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:569778-569872:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:569186-569339:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:568746-568968:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:567431-567594:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:566890-567136:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:566263-566450:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:565451-565601:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:564957-565087:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:564524-564625:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:563858-563971:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:563475-563652:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:563157-563294:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:562562-562848:-1:exon

GBF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: GBF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1
translation: MRGTARMVDKNIYIVQGEINAVVGAIKRNARWSTHTHLDEERDPLLHSFSLLKEVLNNIRELSEIEPNVFLRPFLEVIRSEDTTGPITGLALTSVNKFLSYALIDPSHEGTAEGMENMADAVTHARFVGTDHASDEVVLMKILQVLRTLLLTPVGAHLTNESVCEIMQSCFRICFEMRLSELLRKSAEHTLVDMVQLLFTRLPQFKEEPKSYMGTNMKKLKMRAGGMSESSKWKKQKRSPRPPRHVTKVSPGAEQPAASAGNITASGVSFIDAPSPSSSGCSENVSSAVSPSTDSGMELSSQTTSKEDLTDLDQVTSLGLSAGMPSNEAKIPENQNQPELQSESLREEKIQSASVESIPEVLEECTSVAEHSDSASVHDMDYVNPRGVRFTQSSQKEGAALVPYGLPCIRELFRFLISLTNPHDRHNSEVMIHMGLQLLTVALEAAPIANCQSLLGLVKEELCRHLFQLLSVERLNLYAASLRVCFLLFESMREHLKFQLEMYIKKLMEIITVENPKMPYEMKEMALEAIVQLWRIPSFVTELYLNYDCDYYCANLFEELTKLLSKNAFPVSGQLYTVHLLSLEALLTVIDSTEAHCQAKVLSNMHQQEKEVVKSSPENMNSTKETSNNHERVVPEGKSSSAVPEPAGACPPTSGCLMADQMKESCMDLEGAIQAAEKNIPRKPTRFSCVLPSPQELMQIKNKKKLLITGTEQFNQKPRKGIQFLQEKNLLATPIDNNEVARWLRENPRLDKKMIGEFVSDRKNIDLLESFVGTFSFQGLRLDEALRLYLEAFRLPGEAPVIQRLLEAFTEHWRKSNGSPFANSDACFALAYAVIMLNTDQHNHNVRKQNVPMTLEEFRKNLKGVNGGKDFEQDILEDMYHAIKNDEIVMPEEQTGLVKENYIWNVLLHRGATDEGIFLHVPPGSYDHDLFTMTWGPTIAALSYVFDKSLEETIIQKAISGFRKCAMISAHYGLSDVFDNLIISLCKFTALSSESIENLPTVFGSNPKAHIAAKTVFHLAHRHGDILREGWKNIMEAMLQLFRAELLPKAMVEVEDFVDPNGKIYLQREETPSNRGESTVLSFVSWLTLSGTEQSGMRGPSTETQEAKRAALECIKQCDPEKLITESKFLQLESLQELMKALISVTPDEETYDEEDAAFCLEMLLRIVLENRDRVTCVWQTVRDHLYHLCVHAMEFCFLVERAVVGLLRLAIRLLRREEISTQVLLSLRILLMMKPNVLSRVSHEVAYGLHELLKTNAANIHSGDDWYTLFTLLECIGSGVKPPAALQVTARADNDTGAQSDSEVSSSYHPSDMSLDRGYTSDSEVYTDHGKPGKMHRSGTDVDVMNSGWLVVGKDDIDTSRATAGHNKLGPSPLVNQYSLTVGLDLGPHDTKSLMKCVESLSFIVRDAAHVTPENFQLCVKTIRIFVEASLNGGYKSQEKRGKSHRYDSKSNRLKKKPKESSTRRSRALSQHQAHTHSDEEEDESIPASYHTVSLQVSQDLLDLMHTLHTRAATIYSSWAEEQRHLETAGRKIQADSRTLWSNCWCPLLQGIAWLCCDARRQVRMQALTYLQRALLVHDLQALDALEWESCFNKVLFPLLTKLLENISPADVGGMEETRMRASTLLSKVFLQHLSPLLSLTTFAALWLTILDFMDKYMHAGSSDLLLEAIPESLKNMLLVMDTAGIFHSADSRTGYSDLWEITWERIDCFLPRLRDELFKQAVIPDPVPSIPTEQQHQKSIVSALPPCPAGDVRPATHLAPLERPSELGASESERATAPASPTISTSASPPFPTAAPARTSPVTDIPPTTAQPPLILQPLASPLQVGVPPMTLPIILNPALIEATSPVPLLATPRPTDPMTTSEVN
SIO_010081: GBF1
subclass of: SO_0000673
so part of: GBF1
location: complement(join(562562..562848,563157..563294,563475..563652,563858..563971,564524..564625,564957..565087,565451..565601,566251..566450,566890..567136,567431..567594,568746..568968,569186..569339,569778..569872,570645..570716,571310..571433,571518..571582,572045..572221,574324..574417,574930..575166,576372..576454,576932..577057,577343..577466,577908..578110,579221..579309,579783..579923,580362..580548,580713..580907,581296..581394,581941..582152,582292..582460,583151..583380,584095..584230,589690..589744,591430..591490,591843..591951,592543..592661,596413..596544,636340..636406,637329..637434,641783..641790))
location: region:562562-641790:-1
so has part: feature:641783-641790:-1:exon
so has part: feature:637329-637434:-1:exon
so has part: feature:636340-636406:-1:exon
so has part: feature:596413-596544:-1:exon
so has part: feature:592543-592661:-1:exon
so has part: feature:591843-591951:-1:exon
so has part: feature:591430-591490:-1:exon
so has part: feature:589690-589744:-1:exon
so has part: feature:584095-584230:-1:exon
so has part: feature:583151-583380:-1:exon
so has part: feature:582292-582460:-1:exon
so has part: feature:581941-582152:-1:exon
so has part: feature:581296-581394:-1:exon
so has part: feature:580713-580907:-1:exon
so has part: feature:580362-580548:-1:exon
so has part: feature:579783-579923:-1:exon
so has part: feature:579221-579309:-1:exon
so has part: feature:577908-578110:-1:exon
so has part: feature:577343-577466:-1:exon
so has part: feature:576932-577057:-1:exon
so has part: feature:576372-576454:-1:exon
so has part: feature:574930-575166:-1:exon
so has part: feature:574324-574417:-1:exon
so has part: feature:572045-572221:-1:exon
so has part: feature:571518-571582:-1:exon
so has part: feature:571310-571433:-1:exon
so has part: feature:570645-570716:-1:exon
so has part: feature:569778-569872:-1:exon
so has part: feature:569186-569339:-1:exon
so has part: feature:568746-568968:-1:exon
so has part: feature:567431-567594:-1:exon
so has part: feature:566890-567136:-1:exon
so has part: feature:566251-566450:-1:exon
so has part: feature:565451-565601:-1:exon
so has part: feature:564957-565087:-1:exon
so has part: feature:564524-564625:-1:exon
so has part: feature:563858-563971:-1:exon
so has part: feature:563475-563652:-1:exon
so has part: feature:563157-563294:-1:exon
so has part: feature:562562-562848:-1:exon

XP_030308769.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:641783-641790:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:637329-637434:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:636340-636406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:596413-596544:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:592543-592661:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:591843-591951:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:591430-591490:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:589690-589744:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:584095-584230:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:583151-583380:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:582292-582460:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:581941-582152:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:581296-581394:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:580713-580907:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:580362-580548:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:579783-579923:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:579221-579309:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:577908-578110:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:577343-577466:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:576932-577057:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:576372-576454:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:574930-575166:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:574324-574417:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:572045-572221:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:571518-571582:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:571310-571433:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:570645-570716:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:569778-569872:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:569186-569339:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:568746-568968:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:567431-567594:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:566890-567136:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:566251-566450:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:565451-565601:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:564957-565087:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:564524-564625:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:563858-563971:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:563475-563652:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:563157-563294:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:562562-562848:-1:exon

PITX3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PITX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 647728..664116
location: region:647728-664116:1
so has part: feature:647728-664116:1:exon
subclass of: SO_0000010

103537677
type: Gene
SIO_000068: ncbigene

position:647728:1
position: 647728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:664116:1
position: 664116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:647728-664116:1:exon

PITX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PITX3
product: paired like homeodomain 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030452921.1
SIO_010081: PITX3
subclass of: SO_0000673
so part of: PITX3
location: join(647728..647898,660208..660351,661601..661806,662642..664116)
location: region:647728-664116:1
so has part: feature:647728-647898:1:exon
so has part: feature:660208-660351:1:exon
so has part: feature:661601-661806:1:exon
so has part: feature:662642-664116:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:647728-647898:1:exon

position:647898:1
position: 647898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:660208-660351:1:exon

position:660208:1
position: 660208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660351:1
position: 660351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:661601-661806:1:exon

position:661601:1
position: 661601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:661806:1
position: 661806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:662642-664116:1:exon

position:662642:1
position: 662642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PITX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PITX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pituitary homeobox 3
translation: MDFNLLAEAEARSPALSLSDSGTPQHEHSCKGQDHSDTEKSQQNQTDDSNPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKNSFGAQFNGLMQPYDDVYSSYSYNNWATKGLATSPLSAKSFPFFNSMNVSPLSSQPMFSPPSSISSMTMPSSMVPSAVPASSLNNLGNINNLNSPGLSPAVSSSACPYASTASPYMYRDTCNSSLASLRLKAKQHANFPYPPVQTAASNLSPCQYAVDRPV
SIO_010081: PITX3
subclass of: SO_0000673
so part of: PITX3
location: join(660243..660351,661601..661806,662642..663196)
location: region:660243-663196:1
so has part: feature:660243-660351:1:exon
so has part: feature:661601-661806:1:exon
so has part: feature:662642-663196:1:exon

XP_030308781.1
type: Protein
SIO_000068: ncbiprotein

position:660243:1
position: 660243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663196:1
position: 663196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660243-660351:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:661601-661806:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:662642-663196:1:exon

LOC103537710
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103537710
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(666609..668944)
location: region:666609-668944:-1
so has part: feature:666609-668944:-1:exon
subclass of: SO_0000010

103537710
type: Gene
SIO_000068: ncbigene

position:666609:-1
position: 666609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668944:-1
position: 668944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:666609-668944:-1:exon

LOC103537710
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103537710
product: elongation of very long chain fatty acids protein 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 28% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008504024.2
SIO_010081: LOC103537710
subclass of: SO_0000673
so part of: LOC103537710
location: complement(join(666609..667036,667545..667696,668415..668546,668832..668944))
location: region:666609-668944:-1
so has part: feature:668832-668944:-1:exon
so has part: feature:668415-668546:-1:exon
so has part: feature:667545-667696:-1:exon
so has part: feature:666609-667036:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:668832-668944:-1:exon

position:668832:-1
position: 668832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:668415-668546:-1:exon

position:668415:-1
position: 668415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668546:-1
position: 668546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:667545-667696:-1:exon

position:667545:-1
position: 667545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667696:-1
position: 667696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:666609-667036:-1:exon

position:667036:-1
position: 667036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103537710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103537710
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elongation of very long chain fatty acids protein 6
translation: MLAMELSLDPSELELRGEFGFERDFNDREAREWMRENWHKSVVLAVVYVILVFGIQQFMKGRRAYSLRTPLALWSLGLALLNGIAARRVWQHLSFILATKGFRHSVCSQSFYIHPISKLWVYLFALSKLLELGDTLFIVLRKKQLIFLHWFHHVTSLVATWYGYKEMVAGTGWLTVLNFSVHAIMYSYYVLRAAGFQVSRPVAMAITVTQILQMLGFVVMYALILFWMEEEDKVCHTSWAFGFLSFVLCLSFLVLFCNLFLKTYLGSTQKPKRR
SIO_010081: LOC103537710
subclass of: SO_0000673
so part of: LOC103537710
location: complement(join(666609..667036,667545..667696,668415..668546,668832..668944))
location: region:666609-668944:-1
so has part: feature:668832-668944:-1:exon
so has part: feature:668415-668546:-1:exon
so has part: feature:667545-667696:-1:exon
so has part: feature:666609-667036:-1:exon

XP_008502246.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:668832-668944:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:668415-668546:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:667545-667696:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:666609-667036:-1:exon

LOC103537711
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103537711
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(673647..684800)
location: region:673647-684800:-1
so has part: feature:673647-684800:-1:exon
subclass of: SO_0000010

103537711
type: Gene
SIO_000068: ncbigene

position:673647:-1
position: 673647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684800:-1
position: 684800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:673647-684800:-1:exon

LOC103537711
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103537711
product: 2-hydroxyacylsphingosine 1-beta-galactosyltransferase
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_008504025.2
SIO_010081: LOC103537711
subclass of: SO_0000673
so part of: LOC103537711
location: complement(join(673647..674026,674943..675162,675922..675998,676178..676317,678863..679711,684731..684800))
location: region:673647-684800:-1
so has part: feature:684731-684800:-1:exon
so has part: feature:678863-679711:-1:exon
so has part: feature:676178-676317:-1:exon
so has part: feature:675922-675998:-1:exon
so has part: feature:674943-675162:-1:exon
so has part: feature:673647-674026:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:684731-684800:-1:exon

position:684731:-1
position: 684731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:678863-679711:-1:exon

position:678863:-1
position: 678863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679711:-1
position: 679711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:676178-676317:-1:exon

position:676178:-1
position: 676178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:676317:-1
position: 676317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:675922-675998:-1:exon

position:675922:-1
position: 675922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:675998:-1
position: 675998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:674943-675162:-1:exon

position:674943:-1
position: 674943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:675162:-1
position: 675162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:673647-674026:-1:exon

position:674026:-1
position: 674026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103537711
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103537711
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: 2-hydroxyacylsphingosine 1-beta-galactosyltransferase
translation: MKMMKALPYPAALLFLLAASPLEPSHCAKVLIMPTIVFDSHLRVFMRVAEALSDRGHDPVLLLHEGRDVDTHLPGFRLQRYRGIFSTESADAWVQEKIKRVFQGKMTSLEMFSFLEKYLENCDLVLGNSSLLQKLGSERFDLLLVDPNEMCGFILAHILRVKYAVISTGFWFPAEIGATSPISYVPEFNSLMTDRMGFLGRTWNLLVYIITRVATKLVILPKFERLMEKHGVEPRTSMLDLVHGTSLFFLCNDVVLDFPRPTLPHVIFTGGILAEPAKPLPVGLRLWVEGADAGVVVVSFGIGIRALPRELVEKMAGAFARLPQRVVWRYFGQKPRNLGENTLMMGWLPQNDLLGHPNVKAFVSHCGMNGVFEAIYHGVPVVGFPFYGDQFDIMTRVQAKGMGILMDWSRVKEEELYQAVIRVISEPSYRTAAQQISALHLDRPMHALNRTVYWLEYILRHHGAPFLRPAVYDLSWYQYFCLDILALLLLCLAGLGFLLYKSVGWWWRWWRGSGLSPVHQNGSCLRGHCTEEKKWQ
SIO_010081: LOC103537711
subclass of: SO_0000673
so part of: LOC103537711
location: complement(join(673699..674026,674943..675162,675922..675998,676178..676317,678863..679709))
location: region:673699-679709:-1
so has part: feature:678863-679709:-1:exon
so has part: feature:676178-676317:-1:exon
so has part: feature:675922-675998:-1:exon
so has part: feature:674943-675162:-1:exon
so has part: feature:673699-674026:-1:exon

XP_008502247.1
type: Protein
SIO_000068: ncbiprotein

position:673699:-1
position: 673699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679709:-1
position: 679709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:678863-679709:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:676178-676317:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:675922-675998:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:674943-675162:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:673699-674026:-1:exon

NOLC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: NOLC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(685689..694415)
location: region:685689-694415:-1
so has part: feature:685689-694415:-1:exon
subclass of: SO_0000010

103537713
type: Gene
SIO_000068: ncbigene

position:685689:-1
position: 685689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694415:-1
position: 694415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:685689-694415:-1:exon

NOLC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NOLC1
product: nucleolar and coiled-body phosphoprotein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030453365.1
SIO_010081: NOLC1
subclass of: SO_0000673
so part of: NOLC1
location: complement(join(685689..687650,687883..687963,688320..688432,688867..689424,689526..689672,690146..690235,690757..690897,691479..691629,691872..691975,692199..692352,693017..693135,693534..693667,694080..694135,694275..694415))
location: region:685689-694415:-1
so has part: feature:694275-694415:-1:exon
so has part: feature:694080-694135:-1:exon
so has part: feature:693534-693667:-1:exon
so has part: feature:693017-693135:-1:exon
so has part: feature:692199-692352:-1:exon
so has part: feature:691872-691975:-1:exon
so has part: feature:691479-691629:-1:exon
so has part: feature:690757-690897:-1:exon
so has part: feature:690146-690235:-1:exon
so has part: feature:689526-689672:-1:exon
so has part: feature:688867-689424:-1:exon
so has part: feature:688320-688432:-1:exon
so has part: feature:687883-687963:-1:exon
so has part: feature:685689-687650:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:694275-694415:-1:exon

position:694275:-1
position: 694275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:694080-694135:-1:exon

position:694080:-1
position: 694080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694135:-1
position: 694135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:693534-693667:-1:exon

position:693534:-1
position: 693534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693667:-1
position: 693667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:693017-693135:-1:exon

position:693017:-1
position: 693017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693135:-1
position: 693135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:692199-692352:-1:exon

position:692199:-1
position: 692199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:692352:-1
position: 692352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:691872-691975:-1:exon

position:691872:-1
position: 691872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:691975:-1
position: 691975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:691479-691629:-1:exon

position:691479:-1
position: 691479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:691629:-1
position: 691629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:690757-690897:-1:exon

position:690757:-1
position: 690757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690897:-1
position: 690897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:690146-690235:-1:exon

position:690146:-1
position: 690146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690235:-1
position: 690235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:689526-689672:-1:exon

position:689526:-1
position: 689526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689672:-1
position: 689672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:688867-689424:-1:exon

position:688867:-1
position: 688867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689424:-1
position: 689424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:688320-688432:-1:exon

position:688320:-1
position: 688320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688432:-1
position: 688432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:687883-687963:-1:exon

position:687883:-1
position: 687883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687963:-1
position: 687963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:685689-687650:-1:exon

position:687650:-1
position: 687650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NOLC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NOLC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar and coiled-body phosphoprotein 1
translation: MMAAVPSDLFPLVLGFLRQNRFEAAARAFAREAAAKEQDPNAASLLEIYSYWLRSPGAQKRKLVANGSQVKRKPPPSSESSSSEEEDEEDETPPAKKPAKAAAVPRTKAAAPAARKAESSSEDSSDESDSEEEKQPAKKGAKPVVKAAGTKLQPQKKAESSSSSSSDEETPKKQPPKAAAAAAAAAPKLGGKAAQVPTKVLNGKAASSSSSSEDSEEEKAAPKKAVPKKSPLPKPAATRPCPGKNKRAKESSSSEDSSDSSEDEKPPAKQKPKPGLYSAVPPPPAPQARKGPAKAPAKKSESSDSSDSSDEEEQVTPKAGAGKKVVAKTTPVPKTKAVTTKKAESSSDSDSDSSSEDDKKGGSKLPAKQPVVKNTPKLPAKAAARPQQAKRDSSSSSDSSDSDSEEKAPVKPPAKAATPAAKKAQSAPKKAQSSSDSDSSSSSSEEDDKKAKKGIPAKSAGKVAKPVSKPSTPAPKADTSDSDSSSSEEEKKPAVKPDSRSLGAAKAAVGKKAAASSSSSSDSSSEEEKPKKAGKGAQNSSKTNGSTEKAKAAPAAVNNLKAKPAGGSSSSSSESSSEEETGKANGGTVGKTQKRKDVQEPETPHSKKAKFKAKTPHTVPKVKQPAAPFRRVREEEIEVDARVADNSFEAKKGAAGDWGEKANNILKFTKGKSFRHEKTKKKRGSYRGGTISTQVNSVKFESD
SIO_010081: NOLC1
subclass of: SO_0000673
so part of: NOLC1
location: complement(join(687492..687650,687883..687963,688320..688432,688867..689424,689526..689672,690146..690235,690757..690897,691479..691629,691872..691975,692199..692352,693017..693135,693534..693667,694080..694135,694275..694379))
location: region:687492-694379:-1
so has part: feature:694275-694379:-1:exon
so has part: feature:694080-694135:-1:exon
so has part: feature:693534-693667:-1:exon
so has part: feature:693017-693135:-1:exon
so has part: feature:692199-692352:-1:exon
so has part: feature:691872-691975:-1:exon
so has part: feature:691479-691629:-1:exon
so has part: feature:690757-690897:-1:exon
so has part: feature:690146-690235:-1:exon
so has part: feature:689526-689672:-1:exon
so has part: feature:688867-689424:-1:exon
so has part: feature:688320-688432:-1:exon
so has part: feature:687883-687963:-1:exon
so has part: feature:687492-687650:-1:exon

XP_030309225.1
type: Protein
SIO_000068: ncbiprotein

position:687492:-1
position: 687492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694379:-1
position: 694379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:694275-694379:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:694080-694135:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:693534-693667:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:693017-693135:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:692199-692352:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:691872-691975:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:691479-691629:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:690757-690897:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:690146-690235:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:689526-689672:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:688867-689424:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:688320-688432:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:687883-687963:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:687492-687650:-1:exon

PIK3AP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PIK3AP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 694509..723124
location: region:694509-723124:1
so has part: feature:694509-723124:1:exon
subclass of: SO_0000010

103537714
type: Gene
SIO_000068: ncbigene

position:694509:1
position: 694509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:723124:1
position: 723124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:694509-723124:1:exon

PIK3AP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PIK3AP1
product: phosphoinositide-3-kinase adaptor protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030452867.1
SIO_010081: PIK3AP1
subclass of: SO_0000673
so part of: PIK3AP1
location: join(694509..695147,696960..697373,701654..702070,709317..709465,710264..710408,711509..711651,712040..712172,712656..712852,714248..714437,716625..716720,717105..717284,717701..717763,718657..718862,719801..719946)
location: region:694509-719946:1
so has part: feature:694509-695147:1:exon
so has part: feature:696960-697373:1:exon
so has part: feature:701654-702070:1:exon
so has part: feature:709317-709465:1:exon
so has part: feature:710264-710408:1:exon
so has part: feature:711509-711651:1:exon
so has part: feature:712040-712172:1:exon
so has part: feature:712656-712852:1:exon
so has part: feature:714248-714437:1:exon
so has part: feature:716625-716720:1:exon
so has part: feature:717105-717284:1:exon
so has part: feature:717701-717763:1:exon
so has part: feature:718657-718862:1:exon
so has part: feature:719801-719946:1:exon

position:719946:1
position: 719946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:694509-695147:1:exon

position:695147:1
position: 695147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:696960-697373:1:exon

position:696960:1
position: 696960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:697373:1
position: 697373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:701654-702070:1:exon

position:701654:1
position: 701654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:702070:1
position: 702070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:709317-709465:1:exon

position:709317:1
position: 709317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:709465:1
position: 709465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:710264-710408:1:exon

position:710264:1
position: 710264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:710408:1
position: 710408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:711509-711651:1:exon

position:711509:1
position: 711509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:711651:1
position: 711651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:712040-712172:1:exon

position:712040:1
position: 712040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:712172:1
position: 712172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:712656-712852:1:exon

position:712656:1
position: 712656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:712852:1
position: 712852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:714248-714437:1:exon

position:714248:1
position: 714248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:714437:1
position: 714437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:716625-716720:1:exon

position:716625:1
position: 716625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:716720:1
position: 716720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:717105-717284:1:exon

position:717105:1
position: 717105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:717284:1
position: 717284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:717701-717763:1:exon

position:717701:1
position: 717701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:717763:1
position: 717763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:718657-718862:1:exon

position:718657:1
position: 718657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:718862:1
position: 718862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:719801-719946:1:exon

position:719801:1
position: 719801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PIK3AP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PIK3AP1
product: phosphoinositide-3-kinase adaptor protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_008504027.2
SIO_010081: PIK3AP1
subclass of: SO_0000673
so part of: PIK3AP1
location: join(696850..697373,701654..702070,709317..709465,710264..710408,711509..711651,712040..712172,712656..712852,714248..714437,716625..716720,717105..717284,717701..717763,718657..718862,720286..720358,720669..720824,721282..721352,721518..721633,722471..723124)
location: region:696850-723124:1
so has part: feature:696850-697373:1:exon
so has part: feature:701654-702070:1:exon
so has part: feature:709317-709465:1:exon
so has part: feature:710264-710408:1:exon
so has part: feature:711509-711651:1:exon
so has part: feature:712040-712172:1:exon
so has part: feature:712656-712852:1:exon
so has part: feature:714248-714437:1:exon
so has part: feature:716625-716720:1:exon
so has part: feature:717105-717284:1:exon
so has part: feature:717701-717763:1:exon
so has part: feature:718657-718862:1:exon
so has part: feature:720286-720358:1:exon
so has part: feature:720669-720824:1:exon
so has part: feature:721282-721352:1:exon
so has part: feature:721518-721633:1:exon
so has part: feature:722471-723124:1:exon

position:696850:1
position: 696850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:696850-697373:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701654-702070:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:709317-709465:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:710264-710408:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:711509-711651:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:712040-712172:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:712656-712852:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:714248-714437:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:716625-716720:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:717105-717284:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:717701-717763:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:718657-718862:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:720286-720358:1:exon

position:720286:1
position: 720286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720358:1
position: 720358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:720669-720824:1:exon

position:720669:1
position: 720669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720824:1
position: 720824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:721282-721352:1:exon

position:721282:1
position: 721282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:721352:1
position: 721352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:721518-721633:1:exon

position:721518:1
position: 721518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:721633:1
position: 721633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:722471-723124:1:exon

position:722471:1
position: 722471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PIK3AP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PIK3AP1
product: phosphoinositide-3-kinase adaptor protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030452866.1
SIO_010081: PIK3AP1
subclass of: SO_0000673
so part of: PIK3AP1
location: join(696974..697373,701654..702070,709317..709465,710264..710408,711509..711651,712040..712172,712656..712852,714248..714437,716625..716720,717105..717284,718657..718862,720286..720358,720669..720824,721282..721352,721518..721633,722471..723124)
location: region:696974-723124:1
so has part: feature:696974-697373:1:exon
so has part: feature:701654-702070:1:exon
so has part: feature:709317-709465:1:exon
so has part: feature:710264-710408:1:exon
so has part: feature:711509-711651:1:exon
so has part: feature:712040-712172:1:exon
so has part: feature:712656-712852:1:exon
so has part: feature:714248-714437:1:exon
so has part: feature:716625-716720:1:exon
so has part: feature:717105-717284:1:exon
so has part: feature:718657-718862:1:exon
so has part: feature:720286-720358:1:exon
so has part: feature:720669-720824:1:exon
so has part: feature:721282-721352:1:exon
so has part: feature:721518-721633:1:exon
so has part: feature:722471-723124:1:exon

position:696974:1
position: 696974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:696974-697373:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701654-702070:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:709317-709465:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:710264-710408:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:711509-711651:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:712040-712172:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:712656-712852:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:714248-714437:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:716625-716720:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:717105-717284:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:718657-718862:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:720286-720358:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:720669-720824:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:721282-721352:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:721518-721633:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:722471-723124:1:exon

PIK3AP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PIK3AP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoinositide 3-kinase adapter protein 1 isoform X1
translation: MARPGTPGGYDVLIVHGSDAREWCQYLQNLFLFTRHLRKHRILGYQLEGEVALSPQELDLFHRSRSIILLLSAELVQSFYLPPVLQSLQEALWPPYKVVKLFCGVTDSEDYSTFFKDWSQWQELTNDDEPDAYLAAVKKAISEDSGCDSVTDTEPEEEKNPVQSRRVAMGEEHGSSRSSGSPPVVQPGRIRCGVQTTLYIIMKCKLDGEVKTEVEFSPENSSPVRVLAEVQNEYTVSVEAPNLTSGTVPLQIYSGDLLVGETSVTYYTDMEEISSLLASAANPVQFMCQAFKIVPYSIEALDKLLTESLKKNIPASGLHLFGINQLEEEDMTTNQRDEELPTLLHFSARYGLKNLTALLLTCPGALQAYSVANNCGHYPNTLAEKHGFRDLRQFIDEYVETADMLKSHIKEELMQGEEDEAIYESMAHLSTDLLMKRSLNPGSDEELYESMAGFVPGAPEDLYVEMLQYKPDSPAARDEGSVTTKDSMLRKFLEGSSMDVPDPGEGEYQQYGEDVYYSVEKDTLPQEMANRPPVPVPRPESSSSQPDNELYISKIFAQKAQRPENLYVPGGGVRTETPVRPVRDLSQSSIYDPFAGMKTPGQRQLITLQEQVKMGMLTVDEAVLHFKEWQLNQKKRSESFRFQQENLKRLRDSITRRQLEKQKKDRNADLEITVPIRHSHHPSGRPECGIYEYTPRKSIIPPKKELKRGDWKTESTSSTTSSASNRSSTRSILSVSSGMEGDSEDNEVPDASRGHSPVSQQAERLPLPFPERPPRVPPRGASRPVSCESFYPPPVPPRGR
SIO_010081: PIK3AP1
subclass of: SO_0000673
so part of: PIK3AP1
location: join(697361..697373,701654..702070,709317..709465,710264..710408,711509..711651,712040..712172,712656..712852,714248..714437,716625..716720,717105..717284,717701..717763,718657..718862,720286..720358,720669..720824,721282..721352,721518..721633,722471..722525)
location: region:697361-722525:1
so has part: feature:697361-697373:1:exon
so has part: feature:701654-702070:1:exon
so has part: feature:709317-709465:1:exon
so has part: feature:710264-710408:1:exon
so has part: feature:711509-711651:1:exon
so has part: feature:712040-712172:1:exon
so has part: feature:712656-712852:1:exon
so has part: feature:714248-714437:1:exon
so has part: feature:716625-716720:1:exon
so has part: feature:717105-717284:1:exon
so has part: feature:717701-717763:1:exon
so has part: feature:718657-718862:1:exon
so has part: feature:720286-720358:1:exon
so has part: feature:720669-720824:1:exon
so has part: feature:721282-721352:1:exon
so has part: feature:721518-721633:1:exon
so has part: feature:722471-722525:1:exon

XP_008502249.1
type: Protein
SIO_000068: ncbiprotein

position:697361:1
position: 697361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722525:1
position: 722525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:697361-697373:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701654-702070:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:709317-709465:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:710264-710408:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:711509-711651:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:712040-712172:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:712656-712852:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:714248-714437:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:716625-716720:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:717105-717284:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:717701-717763:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:718657-718862:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:720286-720358:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:720669-720824:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:721282-721352:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:721518-721633:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:722471-722525:1:exon

PIK3AP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PIK3AP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoinositide 3-kinase adapter protein 1 isoform X2
translation: MARPGTPGGYDVLIVHGSDAREWCQYLQNLFLFTRHLRKHRILGYQLEGEVALSPQELDLFHRSRSIILLLSAELVQSFYLPPVLQSLQEALWPPYKVVKLFCGVTDSEDYSTFFKDWSQWQELTNDDEPDAYLAAVKKAISEDSGCDSVTDTEPEEEKNPVQSRRVAMGEEHGSSRSSGSPPVVQPGRIRCGVQTTLYIIMKCKLDGEVKTEVEFSPENSSPVRVLAEVQNEYTVSVEAPNLTSGTVPLQIYSGDLLVGETSVTYYTDMEEISSLLASAANPVQFMCQAFKIVPYSIEALDKLLTESLKKNIPASGLHLFGINQLEEEDMTTNQRDEELPTLLHFSARYGLKNLTALLLTCPGALQAYSVANNCGHYPNTLAEKHGFRDLRQFIDEYVETADMLKSHIKEELMQGEEDEAIYESMAHLSTDLLMKRSLNPGSDEELYESMAGFVPGAPEDLYVEMLQYKPDSPAARDEGSVTTKDSMLRKFLEGSSMDVPDPGEGEYQQYGEDVYYSVEKDTLPQEMANRPPVPVPRPESSSSQPDNELYISKKTPVRPVRDLSQSSIYDPFAGMKTPGQRQLITLQEQVKMGMLTVDEAVLHFKEWQLNQKKRSESFRFQQENLKRLRDSITRRQLEKQKKDRNADLEITVPIRHSHHPSGRPECGIYEYTPRKSIIPPKKELKRGDWKTESTSSTTSSASNRSSTRSILSVSSGMEGDSEDNEVPDASRGHSPVSQQAERLPLPFPERPPRVPPRGASRPVSCESFYPPPVPPRGR
SIO_010081: PIK3AP1
subclass of: SO_0000673
so part of: PIK3AP1
location: join(697361..697373,701654..702070,709317..709465,710264..710408,711509..711651,712040..712172,712656..712852,714248..714437,716625..716720,717105..717284,718657..718862,720286..720358,720669..720824,721282..721352,721518..721633,722471..722525)
location: region:697361-722525:1
so has part: feature:697361-697373:1:exon
so has part: feature:701654-702070:1:exon
so has part: feature:709317-709465:1:exon
so has part: feature:710264-710408:1:exon
so has part: feature:711509-711651:1:exon
so has part: feature:712040-712172:1:exon
so has part: feature:712656-712852:1:exon
so has part: feature:714248-714437:1:exon
so has part: feature:716625-716720:1:exon
so has part: feature:717105-717284:1:exon
so has part: feature:718657-718862:1:exon
so has part: feature:720286-720358:1:exon
so has part: feature:720669-720824:1:exon
so has part: feature:721282-721352:1:exon
so has part: feature:721518-721633:1:exon
so has part: feature:722471-722525:1:exon

XP_030308726.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:697361-697373:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701654-702070:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:709317-709465:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:710264-710408:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:711509-711651:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:712040-712172:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:712656-712852:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:714248-714437:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:716625-716720:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:717105-717284:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:718657-718862:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:720286-720358:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:720669-720824:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:721282-721352:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:721518-721633:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:722471-722525:1:exon

PIK3AP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PIK3AP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoinositide 3-kinase adapter protein 1 isoform X3
translation: MARPGTPGGYDVLIVHGSDAREWCQYLQNLFLFTRHLRKHRILGYQLEGEVALSPQELDLFHRSRSIILLLSAELVQSFYLPPVLQSLQEALWPPYKVVKLFCGVTDSEDYSTFFKDWSQWQELTNDDEPDAYLAAVKKAISEDSGCDSVTDTEPEEEKNPVQSRRVAMGEEHGSSRSSGSPPVVQPGRIRCGVQTTLYIIMKCKLDGEVKTEVEFSPENSSPVRVLAEVQNEYTVSVEAPNLTSGTVPLQIYSGDLLVGETSVTYYTDMEEISSLLASAANPVQFMCQAFKIVPYSIEALDKLLTESLKKNIPASGLHLFGINQLEEEDMTTNQRDEELPTLLHFSARYGLKNLTALLLTCPGALQAYSVANNCGHYPNTLAEKHGFRDLRQFIDEYVETADMLKSHIKEELMQGEEDEAIYESMAHLSTDLLMKRSLNPGSDEELYESMAGFVPGAPEDLYVEMLQYKPDSPAARDEGSVTTKDSMLRKFLEGSSMDVPDPGEGEYQQYGEDVYYSVEKDTLPQEMANRPPVPVPRPESSSSQPDNELYISKIFAQKAQRPENLYVPGGGVRTETPVRPVRDLSQSSIYDPFAGMKTPGQRQLITLQEQVKMGMLTVDEAVLHFKEWQLNQKKRSESFRFQQVHISLLEKVSFPPNTLPFLMGKSNG
SIO_010081: PIK3AP1
subclass of: SO_0000673
so part of: PIK3AP1
location: join(697361..697373,701654..702070,709317..709465,710264..710408,711509..711651,712040..712172,712656..712852,714248..714437,716625..716720,717105..717284,717701..717763,718657..718862,719801..719878)
location: region:697361-719878:1
so has part: feature:697361-697373:1:exon
so has part: feature:701654-702070:1:exon
so has part: feature:709317-709465:1:exon
so has part: feature:710264-710408:1:exon
so has part: feature:711509-711651:1:exon
so has part: feature:712040-712172:1:exon
so has part: feature:712656-712852:1:exon
so has part: feature:714248-714437:1:exon
so has part: feature:716625-716720:1:exon
so has part: feature:717105-717284:1:exon
so has part: feature:717701-717763:1:exon
so has part: feature:718657-718862:1:exon
so has part: feature:719801-719878:1:exon

XP_030308727.1
type: Protein
SIO_000068: ncbiprotein

position:719878:1
position: 719878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:697361-697373:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701654-702070:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:709317-709465:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:710264-710408:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:711509-711651:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:712040-712172:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:712656-712852:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:714248-714437:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:716625-716720:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:717105-717284:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:717701-717763:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:718657-718862:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:719801-719878:1:exon

LOC103537678
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103537678
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 724079..757300
location: region:724079-757300:1
so has part: feature:724079-757300:1:exon
subclass of: SO_0000010

103537678
type: Gene
SIO_000068: ncbigene

position:724079:1
position: 724079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757300:1
position: 757300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:724079-757300:1:exon

LOC103537678
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103537678
product: transmembrane 9 superfamily member 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 22 ESTs, 11 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030452868.1
SIO_010081: LOC103537678
subclass of: SO_0000673
so part of: LOC103537678
location: join(724079..724268,730642..730837,735181..735303,737457..737617,737875..737952,738435..738566,738853..739019,741180..741274,742470..742600,749204..749343,750857..750925,751020..751166,751650..751733,751834..751910,755873..757300)
location: region:724079-757300:1
so has part: feature:724079-724268:1:exon
so has part: feature:730642-730837:1:exon
so has part: feature:735181-735303:1:exon
so has part: feature:737457-737617:1:exon
so has part: feature:737875-737952:1:exon
so has part: feature:738435-738566:1:exon
so has part: feature:738853-739019:1:exon
so has part: feature:741180-741274:1:exon
so has part: feature:742470-742600:1:exon
so has part: feature:749204-749343:1:exon
so has part: feature:750857-750925:1:exon
so has part: feature:751020-751166:1:exon
so has part: feature:751650-751733:1:exon
so has part: feature:751834-751910:1:exon
so has part: feature:755873-757300:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:724079-724268:1:exon

position:724268:1
position: 724268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:730642-730837:1:exon

position:730642:1
position: 730642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730837:1
position: 730837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:735181-735303:1:exon

position:735181:1
position: 735181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:735303:1
position: 735303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:737457-737617:1:exon

position:737457:1
position: 737457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:737617:1
position: 737617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:737875-737952:1:exon

position:737875:1
position: 737875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:737952:1
position: 737952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:738435-738566:1:exon

position:738435:1
position: 738435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:738566:1
position: 738566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:738853-739019:1:exon

position:738853:1
position: 738853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739019:1
position: 739019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:741180-741274:1:exon

position:741180:1
position: 741180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741274:1
position: 741274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:742470-742600:1:exon

position:742470:1
position: 742470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:742600:1
position: 742600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:749204-749343:1:exon

position:749204:1
position: 749204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:749343:1
position: 749343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:750857-750925:1:exon

position:750857:1
position: 750857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:750925:1
position: 750925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:751020-751166:1:exon

position:751020:1
position: 751020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:751166:1
position: 751166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:751650-751733:1:exon

position:751650:1
position: 751650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:751733:1
position: 751733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:751834-751910:1:exon

position:751834:1
position: 751834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:751910:1
position: 751910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:755873-757300:1:exon

position:755873:1
position: 755873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC103537678
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103537678
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: transmembrane 9 superfamily member 3
translation: MTWPGGAEVTQWLGVGGGARAGSAAGPEAXRPEMAAPGPLLPLLSSLLLLCLPTRVRADEHEHTYQDKEEVVLWMNTVGPYHNRQETYKYFSLPFCVGSKKSISHYHETLGEALQGVELEFSGLDIKFKEDVMQTTYCEIDLDKGRRDAFVYAIKNHYWYQMYIDDLPIWGIVGEADENGEDYYLWTYKKLEIGYNGNRIVDVNLTSEGKVKLVPNTKIQMSYSVKWKKSDVKFEDRFDKYLDPSFFQHRIHWFSIFNSFMMVIFLVGLVSMILMRTLRKDYARYSKEEEMDDMDRDLGDEYGWKQVHGDVFRPSSHPLIFSSLIGSGCQIFAVSLIVIVVAMIEDLYTERGSMLSTAIFVYAATSPVNGYFGGSLYARQGGRRWIKQMFIGAFLIPAMVCGTAFFINFIAIYYHASRAIPFATMVAVCCICFFVILPLNLVGTILGRNLSGQPNFPCRVNAVPRPIPEKKWFMEPAVIVCLGGILPFGSIFIEMYFIFTSFWAYKIYYVYGFMMLVLVILCIVTVCVTIVCTYFLLNAEDYRWQWTSFLSAASTAIYVYMYSFYYYFFKTKMYGLFQTSFYFGYMAVFSTALGIMCGAIGYMGTSAFVRKIYTNVKID
SIO_010081: LOC103537678
subclass of: SO_0000673
so part of: LOC103537678
location: join(724079..724268,730642..730837,735181..735303,737457..737617,737875..737952,738435..738566,738853..739019,741180..741274,742470..742600,749204..749343,750857..750925,751020..751166,751650..751733,751834..751910,755873..755940)
location: region:724079-755940:1
so has part: feature:724079-724268:1:exon
so has part: feature:730642-730837:1:exon
so has part: feature:735181-735303:1:exon
so has part: feature:737457-737617:1:exon
so has part: feature:737875-737952:1:exon
so has part: feature:738435-738566:1:exon
so has part: feature:738853-739019:1:exon
so has part: feature:741180-741274:1:exon
so has part: feature:742470-742600:1:exon
so has part: feature:749204-749343:1:exon
so has part: feature:750857-750925:1:exon
so has part: feature:751020-751166:1:exon
so has part: feature:751650-751733:1:exon
so has part: feature:751834-751910:1:exon
so has part: feature:755873-755940:1:exon

XP_030308728.1
type: Protein
SIO_000068: ncbiprotein

position:755940:1
position: 755940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:724079-724268:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:730642-730837:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:735181-735303:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:737457-737617:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:737875-737952:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:738435-738566:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:738853-739019:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:741180-741274:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:742470-742600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:749204-749343:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:750857-750925:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:751020-751166:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:751650-751733:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:751834-751910:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:755873-755940:1:exon

TLL2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: TLL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 762770..807735
location: region:762770-807735:1
so has part: feature:762770-807735:1:exon
subclass of: SO_0000010

103537715
type: Gene
SIO_000068: ncbigene

position:762770:1
position: 762770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807735:1
position: 807735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:762770-807735:1:exon

TLL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TLL2
product: tolloid like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 32 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030453104.1
SIO_010081: TLL2
subclass of: SO_0000673
so part of: TLL2
location: join(762770..762982,779436..779546,787498..787575,788297..788482,788719..788836,789404..789582,789863..789968,791419..791543,794171..794286,794970..795072,796556..796672,798388..798533,798979..799174,800368..800493,801771..801931,802662..802842,803038..803163,803738..803865,804509..804722,805254..805504,806276..807735)
location: region:762770-807735:1
so has part: feature:762770-762982:1:exon
so has part: feature:779436-779546:1:exon
so has part: feature:787498-787575:1:exon
so has part: feature:788297-788482:1:exon
so has part: feature:788719-788836:1:exon
so has part: feature:789404-789582:1:exon
so has part: feature:789863-789968:1:exon
so has part: feature:791419-791543:1:exon
so has part: feature:794171-794286:1:exon
so has part: feature:794970-795072:1:exon
so has part: feature:796556-796672:1:exon
so has part: feature:798388-798533:1:exon
so has part: feature:798979-799174:1:exon
so has part: feature:800368-800493:1:exon
so has part: feature:801771-801931:1:exon
so has part: feature:802662-802842:1:exon
so has part: feature:803038-803163:1:exon
so has part: feature:803738-803865:1:exon
so has part: feature:804509-804722:1:exon
so has part: feature:805254-805504:1:exon
so has part: feature:806276-807735:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:762770-762982:1:exon

position:762982:1
position: 762982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:779436-779546:1:exon

position:779436:1
position: 779436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:779546:1
position: 779546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:787498-787575:1:exon

position:787498:1
position: 787498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787575:1
position: 787575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:788297-788482:1:exon

position:788297:1
position: 788297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788482:1
position: 788482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:788719-788836:1:exon

position:788719:1
position: 788719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788836:1
position: 788836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:789404-789582:1:exon

position:789404:1
position: 789404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789582:1
position: 789582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:789863-789968:1:exon

position:789863:1
position: 789863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789968:1
position: 789968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:791419-791543:1:exon

position:791419:1
position: 791419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:791543:1
position: 791543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:794171-794286:1:exon

position:794171:1
position: 794171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:794286:1
position: 794286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:794970-795072:1:exon

position:794970:1
position: 794970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:795072:1
position: 795072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:796556-796672:1:exon

position:796556:1
position: 796556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:796672:1
position: 796672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:798388-798533:1:exon

position:798388:1
position: 798388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:798533:1
position: 798533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:798979-799174:1:exon

position:798979:1
position: 798979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:799174:1
position: 799174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:800368-800493:1:exon

position:800368:1
position: 800368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:800493:1
position: 800493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:801771-801931:1:exon

position:801771:1
position: 801771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:801931:1
position: 801931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:802662-802842:1:exon

position:802662:1
position: 802662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:802842:1
position: 802842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:803038-803163:1:exon

position:803038:1
position: 803038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:803163:1
position: 803163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:803738-803865:1:exon

position:803738:1
position: 803738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:803865:1
position: 803865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:804509-804722:1:exon

position:804509:1
position: 804509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:804722:1
position: 804722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:805254-805504:1:exon

position:805254:1
position: 805254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805504:1
position: 805504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:806276-807735:1:exon

position:806276:1
position: 806276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TLL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TLL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tolloid-like protein 2
translation: MGRGVVPFRRLLLSLLLFPTGGGVIALPGGEAEPLEELLEYRDPCKAAAFWGDIALDEDDLKLFHTDRAAALPRPSAAHVRHTSGGLGEQPLVTSENTTSAQPSSTAVKKEGRQNTTLERRPRRKADDEDEDEDEDELEPPSSPRLRRATTSRAERIWPGGVIPYVIGGNFTGSQRAIFKQAMRHWEKHTCVTFVERTDEESFIVFTYRTCGCCSYVGRRGGGPQAISIGKNCDKFGIVAHELGHVVGFWHEHTRPDRDQHVTIIRENIQQGQEYNFLKMEAGEVNSLGETYDFDSIMHYARNTFSRGVFLDTILPRRDDNGVRPSIGQRIRLSQGDIAQARKLYKCPACGETLQDSAGNFSAPGFPNGYPSYSHCVWRISVTPGEKIMLNFTAMDLFKSRLCWYDYLEVRDGYWRKAPLLGRFCGDKIPEPVTSTDSRLWVEFRSSSNILGKGFFVLYEAICGGEIHKDAGQIQSPNYPDDYRPSKECIWKITVSEGFHIGITFQAFEVEWHDACSYDYLEIRDGLTESSPLIGHFCGYEKPEDIKSSSNKVWMKFASDATINKAGFAANFFKEMDECSLPDNGGCEQHCENTLGSYRCTCEPGYELTADKKSCEAACGGFITKLNGTITSPGWPKEYPTNKHCVWQVVAPAQYRISLQFQVFELEGNDVCKYDYVEVRSGLASDSKLHGKFCGSEKPEVITSHGNNMRLEFRSDNTVSKKGFKVHYFSDKDECSKDNGGCQHECINTFGSYVCQCRNGFILHENAHDCKEAGCEHKLSSAEGTMSSPNWPDKYPSRKECTWDISATPGHRVKVTFSEFEIEQHQECAYDHLELYDGPTSKSPILGRFCGSKKPDPVLASTNKMFLRFYSDASVQRKGFQAKHSTECGGLLKAEVQTKELFSHAQFGDNNYPGQADCEWVIVAEDGYGVELIFQTFEVEEEADCGYDYLEVYDGYDSTAPRLGRFCGSGPLEEIYSAGDSIMIQFHTDDTINKKGFHAQYISTKFQDALHMRK
SIO_010081: TLL2
subclass of: SO_0000673
so part of: TLL2
location: join(762841..762982,779436..779546,787498..787575,788297..788482,788719..788836,789404..789582,789863..789968,791419..791543,794171..794286,794970..795072,796556..796672,798388..798533,798979..799174,800368..800493,801771..801931,802662..802842,803038..803163,803738..803865,804509..804722,805254..805504,806276..806410)
location: region:762841-806410:1
so has part: feature:762841-762982:1:exon
so has part: feature:779436-779546:1:exon
so has part: feature:787498-787575:1:exon
so has part: feature:788297-788482:1:exon
so has part: feature:788719-788836:1:exon
so has part: feature:789404-789582:1:exon
so has part: feature:789863-789968:1:exon
so has part: feature:791419-791543:1:exon
so has part: feature:794171-794286:1:exon
so has part: feature:794970-795072:1:exon
so has part: feature:796556-796672:1:exon
so has part: feature:798388-798533:1:exon
so has part: feature:798979-799174:1:exon
so has part: feature:800368-800493:1:exon
so has part: feature:801771-801931:1:exon
so has part: feature:802662-802842:1:exon
so has part: feature:803038-803163:1:exon
so has part: feature:803738-803865:1:exon
so has part: feature:804509-804722:1:exon
so has part: feature:805254-805504:1:exon
so has part: feature:806276-806410:1:exon

XP_030308964.1
type: Protein
SIO_000068: ncbiprotein

position:762841:1
position: 762841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806410:1
position: 806410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:762841-762982:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:779436-779546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:787498-787575:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:788297-788482:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:788719-788836:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:789404-789582:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:789863-789968:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:791419-791543:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:794171-794286:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:794970-795072:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:796556-796672:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:798388-798533:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:798979-799174:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:800368-800493:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:801771-801931:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:802662-802842:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:803038-803163:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:803738-803865:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:804509-804722:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:805254-805504:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:806276-806410:1:exon

LOC103537679
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103537679
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(816678..822496)
location: region:816678-822496:-1
so has part: feature:816678-822496:-1:exon
subclass of: SO_0000010

103537679
type: Gene
SIO_000068: ncbigene

position:816678:-1
position: 816678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822496:-1
position: 822496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:816678-822496:-1:exon

LOC103537679
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103537679
product: cytochrome P450 2C19
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 94 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_008503982.2
SIO_010081: LOC103537679
subclass of: SO_0000673
so part of: LOC103537679
location: complement(join(816678..817010,817116..817335,817977..818118,818340..818527,818856..818997,819423..819599,819956..820116,820534..820683,821748..821910,822280..822496))
location: region:816678-822496:-1
so has part: feature:822280-822496:-1:exon
so has part: feature:821748-821910:-1:exon
so has part: feature:820534-820683:-1:exon
so has part: feature:819956-820116:-1:exon
so has part: feature:819423-819599:-1:exon
so has part: feature:818856-818997:-1:exon
so has part: feature:818340-818527:-1:exon
so has part: feature:817977-818118:-1:exon
so has part: feature:817116-817335:-1:exon
so has part: feature:816678-817010:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:822280-822496:-1:exon

position:822280:-1
position: 822280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:821748-821910:-1:exon

position:821748:-1
position: 821748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:821910:-1
position: 821910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:820534-820683:-1:exon

position:820534:-1
position: 820534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820683:-1
position: 820683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:819956-820116:-1:exon

position:819956:-1
position: 819956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820116:-1
position: 820116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:819423-819599:-1:exon

position:819423:-1
position: 819423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819599:-1
position: 819599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:818856-818997:-1:exon

position:818856:-1
position: 818856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818997:-1
position: 818997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:818340-818527:-1:exon

position:818340:-1
position: 818340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818527:-1
position: 818527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:817977-818118:-1:exon

position:817977:-1
position: 817977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818118:-1
position: 818118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:817116-817335:-1:exon

position:817116:-1
position: 817116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817335:-1
position: 817335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:816678-817010:-1:exon

position:817010:-1
position: 817010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103537679
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103537679
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome P450 2C19
translation: MELLGAALLLLCITCLLSFASWRRRSGKGKMPPGPTPLPILGNLLQVKPKDLSKTLEKLSEKYGPVFTVHMGSDPVVVLHGHSAVREALIERADEFAVRGHMPIGDRANNGLGIIFSNNTEWVQARKFAVSTLRNFGMGKRSMEERILEEAEHLLDEINKTKGEAFDPTYILSCAVSNIICSIVFGKRYDYKDKNFLSLMGSMDIIFEKMNSIWGQLYQMFPNIMYYLPGPHNNMFDQFDALKAFVYEEMKLHQASLDPSSPQDFLDCYLCKMQEEKDNPSSSFHMKNLITTTFDLFLGGTETTSTTIRYGLLLLIKYPKIQEKVQEEIDQVVGRSRRPCLADRPQMPYTDAVVHEIQRFIKLIPLSVPHSVDKDTCFREYVIPKGTTIFPVLSSVLHDEKEFPNPDEFCPEHFLNKNGTFRKSEFFIPFSAGKRICPGEGLARMEIFLLIAAILQNYTLKAVINPQELSITPTLSGIGNIPPAFQLCALPR
SIO_010081: LOC103537679
subclass of: SO_0000673
so part of: LOC103537679
location: complement(join(817154..817335,817977..818118,818340..818527,818856..818997,819423..819599,819956..820116,820534..820683,821748..821910,822280..822453))
location: region:817154-822453:-1
so has part: feature:822280-822453:-1:exon
so has part: feature:821748-821910:-1:exon
so has part: feature:820534-820683:-1:exon
so has part: feature:819956-820116:-1:exon
so has part: feature:819423-819599:-1:exon
so has part: feature:818856-818997:-1:exon
so has part: feature:818340-818527:-1:exon
so has part: feature:817977-818118:-1:exon
so has part: feature:817154-817335:-1:exon

XP_008502204.2
type: Protein
SIO_000068: ncbiprotein

position:817154:-1
position: 817154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822453:-1
position: 822453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:822280-822453:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:821748-821910:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:820534-820683:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:819956-820116:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:819423-819599:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:818856-818997:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:818340-818527:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:817977-818118:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:817154-817335:-1:exon

LOC103537716
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103537716
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 824550..829352
location: region:824550-829352:1
so has part: feature:824550-829352:1:exon
subclass of: SO_0000010

103537716
type: Gene
SIO_000068: ncbigene

position:824550:1
position: 824550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:829352:1
position: 829352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:824550-829352:1:exon

LOC103537716
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103537716
product: zona pellucida sperm-binding protein 4-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 5% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030453151.1
SIO_010081: LOC103537716
subclass of: SO_0000673
so part of: LOC103537716
location: join(824550..824736,824956..825072,825379..825500,825578..825670,826237..826392,826729..826916,827056..827153,827444..827574,827738..827905,827979..828126,828650..828723,828981..829139,829225..829352)
location: region:824550-829352:1
so has part: feature:824550-824736:1:exon
so has part: feature:824956-825072:1:exon
so has part: feature:825379-825500:1:exon
so has part: feature:825578-825670:1:exon
so has part: feature:826237-826392:1:exon
so has part: feature:826729-826916:1:exon
so has part: feature:827056-827153:1:exon
so has part: feature:827444-827574:1:exon
so has part: feature:827738-827905:1:exon
so has part: feature:827979-828126:1:exon
so has part: feature:828650-828723:1:exon
so has part: feature:828981-829139:1:exon
so has part: feature:829225-829352:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:824550-824736:1:exon

position:824736:1
position: 824736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:824956-825072:1:exon

position:824956:1
position: 824956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:825072:1
position: 825072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:825379-825500:1:exon

position:825379:1
position: 825379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:825500:1
position: 825500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:825578-825670:1:exon

position:825578:1
position: 825578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:825670:1
position: 825670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:826237-826392:1:exon

position:826237:1
position: 826237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:826392:1
position: 826392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:826729-826916:1:exon

position:826729:1
position: 826729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:826916:1
position: 826916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:827056-827153:1:exon

position:827056:1
position: 827056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:827153:1
position: 827153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:827444-827574:1:exon

position:827444:1
position: 827444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:827574:1
position: 827574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:827738-827905:1:exon

position:827738:1
position: 827738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:827905:1
position: 827905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:827979-828126:1:exon

position:827979:1
position: 827979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:828126:1
position: 828126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:828650-828723:1:exon

position:828650:1
position: 828650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:828723:1
position: 828723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:828981-829139:1:exon

position:828981:1
position: 828981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:829139:1
position: 829139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:829225-829352:1:exon

position:829225:1
position: 829225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC103537716
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103537716
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 3 codons; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:825429..825431,aa:OTHER)
transl except: (pos:827874..827876,aa:OTHER)
product: LOW QUALITY PROTEIN: zona pellucida sperm-binding protein 4-like
translation: MVEDLLSGKSPPCRCAKPPEIPSLKALETPLTPPSAADGDGYSPTSAISSAPSPQTLLGWEAGAQGSIFPDLTLLVCGQERLQLTLPPGWEGNTSFVLTAWDTEGTAHALQNDSDCGVXVSGTPAGSREVSVSYTGCFVFEWDGNYLLLLGLEGTDAAGQKVLWEEKXPQDLPALDAPSSSVCSAVPRQDRLPCVPLPVTQGDCEARGCCSDPQDRLTPCYYGSTVTAHCTPEGQFSIAVSWDVTLPPILLGSLQLASGHQAGCVPAMATSAFAVYHFPVSSCGTTLQVTGDQVIYENELVASRDVKTGDHGSVTRDSTFRLCVCCSYPISGSPIPLGVQVFTLPPLLAVSQPGPLALELRVASDGAYTSYYADRDXRDPLYAEVRLLQRTDPDLVLVLQHCWATPSSTAXQHQWPVLVDGCPYAGDNYQTELVALGHASGLLFPSHHQRFTLYTFTFVDSSSQEMLSGLVYLHCXSLCHQSLQQPCTTTCPPRTRGKRTAGHPPGDTEHPPGDTEHPPGDAASRVSSRGPVIFLPEELRWEPGKDDLGAAAAPWALVFAGLGPALGMVLVAAVLWGRKSSGRQEIHGLQ
SIO_010081: LOC103537716
subclass of: SO_0000673
so part of: LOC103537716
location: join(824550..824736,824956..825072,825379..825500,825578..825670,826237..826392,826729..826916,827056..827153,827444..827574,827738..827905,827979..828126,828650..828723,828981..829139,829225..829352)
location: region:824550-829352:1
so has part: feature:824550-824736:1:exon
so has part: feature:824956-825072:1:exon
so has part: feature:825379-825500:1:exon
so has part: feature:825578-825670:1:exon
so has part: feature:826237-826392:1:exon
so has part: feature:826729-826916:1:exon
so has part: feature:827056-827153:1:exon
so has part: feature:827444-827574:1:exon
so has part: feature:827738-827905:1:exon
so has part: feature:827979-828126:1:exon
so has part: feature:828650-828723:1:exon
so has part: feature:828981-829139:1:exon
so has part: feature:829225-829352:1:exon

XP_030309011.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:824550-824736:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:824956-825072:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:825379-825500:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:825578-825670:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:826237-826392:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:826729-826916:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:827056-827153:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:827444-827574:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:827738-827905:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:827979-828126:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:828650-828723:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:828981-829139:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:829225-829352:1:exon

LOC115598528
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115598528
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(831471..850659)
location: region:831471-850659:-1
so has part: feature:831471-850659:-1:exon
subclass of: SO_0000010

115598528
type: Gene
SIO_000068: ncbigene

position:831471:-1
position: 831471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850659:-1
position: 850659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:831471-850659:-1:exon

LOC115598528
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC115598528
product: uncharacterized LOC115598528, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030453277.1
SIO_010081: LOC115598528
subclass of: SO_0000673
so part of: LOC115598528
location: complement(join(831471..832887,833515..833634,835218..835336,836595..836621,836993..837144,837731..837917,839337..839498,842239..843098,850404..850659))
location: region:831471-850659:-1
so has part: feature:850404-850659:-1:exon
so has part: feature:842239-843098:-1:exon
so has part: feature:839337-839498:-1:exon
so has part: feature:837731-837917:-1:exon
so has part: feature:836993-837144:-1:exon
so has part: feature:836595-836621:-1:exon
so has part: feature:835218-835336:-1:exon
so has part: feature:833515-833634:-1:exon
so has part: feature:831471-832887:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:850404-850659:-1:exon

position:850404:-1
position: 850404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:842239-843098:-1:exon

position:842239:-1
position: 842239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:843098:-1
position: 843098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:839337-839498:-1:exon

position:839337:-1
position: 839337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:839498:-1
position: 839498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:837731-837917:-1:exon

position:837731:-1
position: 837731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:837917:-1
position: 837917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:836993-837144:-1:exon

position:836993:-1
position: 836993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:837144:-1
position: 837144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:836595-836621:-1:exon

position:836595:-1
position: 836595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:836621:-1
position: 836621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:835218-835336:-1:exon

position:835218:-1
position: 835218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:835336:-1
position: 835336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:833515-833634:-1:exon

position:833515:-1
position: 833515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:833634:-1
position: 833634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:831471-832887:-1:exon

position:832887:-1
position: 832887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115598528
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC115598528
product: uncharacterized LOC115598528, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030453275.1
SIO_010081: LOC115598528
subclass of: SO_0000673
so part of: LOC115598528
location: complement(join(831471..832887,833515..833634,835218..835336,836595..836621,836993..837144,837731..837917,839337..839498,842239..843101,850404..850659))
location: region:831471-850659:-1
so has part: feature:850404-850659:-1:exon
so has part: feature:842239-843101:-1:exon
so has part: feature:839337-839498:-1:exon
so has part: feature:837731-837917:-1:exon
so has part: feature:836993-837144:-1:exon
so has part: feature:836595-836621:-1:exon
so has part: feature:835218-835336:-1:exon
so has part: feature:833515-833634:-1:exon
so has part: feature:831471-832887:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:850404-850659:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:842239-843101:-1:exon

position:843101:-1
position: 843101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:839337-839498:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:837731-837917:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:836993-837144:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:836595-836621:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:835218-835336:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:833515-833634:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:831471-832887:-1:exon

LOC115598528
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC115598528
product: uncharacterized LOC115598528, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030453278.1
SIO_010081: LOC115598528
subclass of: SO_0000673
so part of: LOC115598528
location: complement(join(831471..832887,833515..833634,835218..835336,836595..836621,836993..837144,837731..837917,839337..839498,842239..843098,850179..850308,850404..850659))
location: region:831471-850659:-1
so has part: feature:850404-850659:-1:exon
so has part: feature:850179-850308:-1:exon
so has part: feature:842239-843098:-1:exon
so has part: feature:839337-839498:-1:exon
so has part: feature:837731-837917:-1:exon
so has part: feature:836993-837144:-1:exon
so has part: feature:836595-836621:-1:exon
so has part: feature:835218-835336:-1:exon
so has part: feature:833515-833634:-1:exon
so has part: feature:831471-832887:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:850404-850659:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:850179-850308:-1:exon

position:850179:-1
position: 850179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850308:-1
position: 850308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:842239-843098:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:839337-839498:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:837731-837917:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:836993-837144:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:836595-836621:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:835218-835336:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:833515-833634:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:831471-832887:-1:exon

LOC115598528
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC115598528
product: uncharacterized LOC115598528, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030453276.1
SIO_010081: LOC115598528
subclass of: SO_0000673
so part of: LOC115598528
location: complement(join(831471..832887,833515..833634,835218..835336,836595..836621,836993..837144,837731..837917,839337..839498,842239..843101,850179..850308,850404..850659))
location: region:831471-850659:-1
so has part: feature:850404-850659:-1:exon
so has part: feature:850179-850308:-1:exon
so has part: feature:842239-843101:-1:exon
so has part: feature:839337-839498:-1:exon
so has part: feature:837731-837917:-1:exon
so has part: feature:836993-837144:-1:exon
so has part: feature:836595-836621:-1:exon
so has part: feature:835218-835336:-1:exon
so has part: feature:833515-833634:-1:exon
so has part: feature:831471-832887:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:850404-850659:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:850179-850308:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:842239-843101:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:839337-839498:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:837731-837917:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:836993-837144:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:836595-836621:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:835218-835336:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:833515-833634:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:831471-832887:-1:exon

LOC115598528
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC115598528
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115598528 isoform X3
translation: MFSWHRSFTLPAPRGKKSPPAEDKVVLTHMKILSNEGIQNPGLMLEAAADPASTEKSPLPTAPSPPTHPGASEAADAPAEPSSGSLPGSADGLGSTDCVARLPDLSTFESKCRLHRFSKFESEDSGVELPSGANSPSTPTASEKSFVLHSRDSFCDSGVLSTSSSPEINHLVMRTCQEHAGEVSPQEPEGAKRAEEEADTGQGPAPSLGGFRVPQEESPDGHFDQSERESLEKEPTLEMDLPRERILPTPAPLEEPKTLADSFPENLGSTPDLQIHGHQLKKCPTSASLDEYMDECCRLSEVNRGSSQALGSGLGYLEHICQLIEKIGQLQEHNLRLQKKVCSLQKELRMSQIKEEYFLQHCSCGAASIFLSSYQDVKMFFSGRSRPHSLLVQTGNSSDLSIIPEIGGNTEKLSSCHGRERCWDSGSSQLVVGLRKQPNNKNNKENEFREAGGMAEGQALPKDPADRKGLDTSRNSWGESHAWGRMKDLMRKTRLRNQNKLGLSSAALKRSCPQLYRPDIVSPEVRKTERNSMIVLGQNTKNENLWPF
SIO_010081: LOC115598528
subclass of: SO_0000673
so part of: LOC115598528
location: complement(join(833538..833634,835218..835336,836595..836621,836993..837144,837731..837917,839337..839498,842239..843098,850404..850446))
location: region:833538-850446:-1
so has part: feature:850404-850446:-1:exon
so has part: feature:842239-843098:-1:exon
so has part: feature:839337-839498:-1:exon
so has part: feature:837731-837917:-1:exon
so has part: feature:836993-837144:-1:exon
so has part: feature:836595-836621:-1:exon
so has part: feature:835218-835336:-1:exon
so has part: feature:833538-833634:-1:exon

XP_030309137.1
type: Protein
SIO_000068: ncbiprotein

position:833538:-1
position: 833538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850446:-1
position: 850446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:850404-850446:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:842239-843098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:839337-839498:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:837731-837917:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:836993-837144:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:836595-836621:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:835218-835336:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:833538-833634:-1:exon

LOC115598528
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC115598528
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115598528 isoform X1
translation: MFSWHRSFTLPAPRAGKKSPPAEDKVVLTHMKILSNEGIQNPGLMLEAAADPASTEKSPLPTAPSPPTHPGASEAADAPAEPSSGSLPGSADGLGSTDCVARLPDLSTFESKCRLHRFSKFESEDSGVELPSGANSPSTPTASEKSFVLHSRDSFCDSGVLSTSSSPEINHLVMRTCQEHAGEVSPQEPEGAKRAEEEADTGQGPAPSLGGFRVPQEESPDGHFDQSERESLEKEPTLEMDLPRERILPTPAPLEEPKTLADSFPENLGSTPDLQIHGHQLKKCPTSASLDEYMDECCRLSEVNRGSSQALGSGLGYLEHICQLIEKIGQLQEHNLRLQKKVCSLQKELRMSQIKEEYFLQHCSCGAASIFLSSYQDVKMFFSGRSRPHSLLVQTGNSSDLSIIPEIGGNTEKLSSCHGRERCWDSGSSQLVVGLRKQPNNKNNKENEFREAGGMAEGQALPKDPADRKGLDTSRNSWGESHAWGRMKDLMRKTRLRNQNKLGLSSAALKRSCPQLYRPDIVSPEVRKTERNSMIVLGQNTKNENLWPF
SIO_010081: LOC115598528
subclass of: SO_0000673
so part of: LOC115598528
location: complement(join(833538..833634,835218..835336,836595..836621,836993..837144,837731..837917,839337..839498,842239..843101,850404..850446))
location: region:833538-850446:-1
so has part: feature:850404-850446:-1:exon
so has part: feature:842239-843101:-1:exon
so has part: feature:839337-839498:-1:exon
so has part: feature:837731-837917:-1:exon
so has part: feature:836993-837144:-1:exon
so has part: feature:836595-836621:-1:exon
so has part: feature:835218-835336:-1:exon
so has part: feature:833538-833634:-1:exon

XP_030309135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:850404-850446:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:842239-843101:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:839337-839498:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:837731-837917:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:836993-837144:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:836595-836621:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:835218-835336:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:833538-833634:-1:exon

LOC115598528
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC115598528
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115598528 isoform X4
translation: MLRSLLAGCLCPPAGKKSPPAEDKVVLTHMKILSNEGIQNPGLMLEAAADPASTEKSPLPTAPSPPTHPGASEAADAPAEPSSGSLPGSADGLGSTDCVARLPDLSTFESKCRLHRFSKFESEDSGVELPSGANSPSTPTASEKSFVLHSRDSFCDSGVLSTSSSPEINHLVMRTCQEHAGEVSPQEPEGAKRAEEEADTGQGPAPSLGGFRVPQEESPDGHFDQSERESLEKEPTLEMDLPRERILPTPAPLEEPKTLADSFPENLGSTPDLQIHGHQLKKCPTSASLDEYMDECCRLSEVNRGSSQALGSGLGYLEHICQLIEKIGQLQEHNLRLQKKVCSLQKELRMSQIKEEYFLQHCSCGAASIFLSSYQDVKMFFSGRSRPHSLLVQTGNSSDLSIIPEIGGNTEKLSSCHGRERCWDSGSSQLVVGLRKQPNNKNNKENEFREAGGMAEGQALPKDPADRKGLDTSRNSWGESHAWGRMKDLMRKTRLRNQNKLGLSSAALKRSCPQLYRPDIVSPEVRKTERNSMIVLGQNTKNENLWPF
SIO_010081: LOC115598528
subclass of: SO_0000673
so part of: LOC115598528
location: complement(join(833538..833634,835218..835336,836595..836621,836993..837144,837731..837917,839337..839498,842239..843098,850179..850221))
location: region:833538-850221:-1
so has part: feature:850179-850221:-1:exon
so has part: feature:842239-843098:-1:exon
so has part: feature:839337-839498:-1:exon
so has part: feature:837731-837917:-1:exon
so has part: feature:836993-837144:-1:exon
so has part: feature:836595-836621:-1:exon
so has part: feature:835218-835336:-1:exon
so has part: feature:833538-833634:-1:exon

XP_030309138.1
type: Protein
SIO_000068: ncbiprotein

position:850221:-1
position: 850221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:850179-850221:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:842239-843098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:839337-839498:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:837731-837917:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:836993-837144:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:836595-836621:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:835218-835336:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:833538-833634:-1:exon

LOC115598528
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC115598528
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115598528 isoform X2
translation: MLRSLLAGCLCPPAAGKKSPPAEDKVVLTHMKILSNEGIQNPGLMLEAAADPASTEKSPLPTAPSPPTHPGASEAADAPAEPSSGSLPGSADGLGSTDCVARLPDLSTFESKCRLHRFSKFESEDSGVELPSGANSPSTPTASEKSFVLHSRDSFCDSGVLSTSSSPEINHLVMRTCQEHAGEVSPQEPEGAKRAEEEADTGQGPAPSLGGFRVPQEESPDGHFDQSERESLEKEPTLEMDLPRERILPTPAPLEEPKTLADSFPENLGSTPDLQIHGHQLKKCPTSASLDEYMDECCRLSEVNRGSSQALGSGLGYLEHICQLIEKIGQLQEHNLRLQKKVCSLQKELRMSQIKEEYFLQHCSCGAASIFLSSYQDVKMFFSGRSRPHSLLVQTGNSSDLSIIPEIGGNTEKLSSCHGRERCWDSGSSQLVVGLRKQPNNKNNKENEFREAGGMAEGQALPKDPADRKGLDTSRNSWGESHAWGRMKDLMRKTRLRNQNKLGLSSAALKRSCPQLYRPDIVSPEVRKTERNSMIVLGQNTKNENLWPF
SIO_010081: LOC115598528
subclass of: SO_0000673
so part of: LOC115598528
location: complement(join(833538..833634,835218..835336,836595..836621,836993..837144,837731..837917,839337..839498,842239..843101,850179..850221))
location: region:833538-850221:-1
so has part: feature:850179-850221:-1:exon
so has part: feature:842239-843101:-1:exon
so has part: feature:839337-839498:-1:exon
so has part: feature:837731-837917:-1:exon
so has part: feature:836993-837144:-1:exon
so has part: feature:836595-836621:-1:exon
so has part: feature:835218-835336:-1:exon
so has part: feature:833538-833634:-1:exon

XP_030309136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:850179-850221:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:842239-843101:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:839337-839498:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:837731-837917:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:836993-837144:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:836595-836621:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:835218-835336:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:833538-833634:-1:exon

HELLS
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: HELLS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 867552..883860
location: region:867552-883860:1
so has part: feature:867552-883860:1:exon
subclass of: SO_0000010

103537680
type: Gene
SIO_000068: ncbigene

position:867552:1
position: 867552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:883860:1
position: 883860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:867552-883860:1:exon

HELLS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: HELLS
product: helicase, lymphoid specific
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030452870.1
SIO_010081: HELLS
subclass of: SO_0000673
so part of: HELLS
location: join(867552..867613,868607..868719,871117..871239,871904..871963,872426..872462,872555..872619,872874..872915,873215..873439,873970..874152,874341..874484,875111..875307,875986..876082,877020..877181,877424..877566,878459..878597,879860..879943,880033..880152,880380..880496,880780..880939,881455..881551,881782..881858,883357..883860)
location: region:867552-883860:1
so has part: feature:867552-867613:1:exon
so has part: feature:868607-868719:1:exon
so has part: feature:871117-871239:1:exon
so has part: feature:871904-871963:1:exon
so has part: feature:872426-872462:1:exon
so has part: feature:872555-872619:1:exon
so has part: feature:872874-872915:1:exon
so has part: feature:873215-873439:1:exon
so has part: feature:873970-874152:1:exon
so has part: feature:874341-874484:1:exon
so has part: feature:875111-875307:1:exon
so has part: feature:875986-876082:1:exon
so has part: feature:877020-877181:1:exon
so has part: feature:877424-877566:1:exon
so has part: feature:878459-878597:1:exon
so has part: feature:879860-879943:1:exon
so has part: feature:880033-880152:1:exon
so has part: feature:880380-880496:1:exon
so has part: feature:880780-880939:1:exon
so has part: feature:881455-881551:1:exon
so has part: feature:881782-881858:1:exon
so has part: feature:883357-883860:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:867552-867613:1:exon

position:867613:1
position: 867613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:868607-868719:1:exon

position:868607:1
position: 868607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868719:1
position: 868719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:871117-871239:1:exon

position:871117:1
position: 871117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:871239:1
position: 871239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:871904-871963:1:exon

position:871904:1
position: 871904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:871963:1
position: 871963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:872426-872462:1:exon

position:872426:1
position: 872426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:872462:1
position: 872462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:872555-872619:1:exon

position:872555:1
position: 872555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:872619:1
position: 872619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:872874-872915:1:exon

position:872874:1
position: 872874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:872915:1
position: 872915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:873215-873439:1:exon

position:873215:1
position: 873215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873439:1
position: 873439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:873970-874152:1:exon

position:873970:1
position: 873970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874152:1
position: 874152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:874341-874484:1:exon

position:874341:1
position: 874341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874484:1
position: 874484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:875111-875307:1:exon

position:875111:1
position: 875111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875307:1
position: 875307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:875986-876082:1:exon

position:875986:1
position: 875986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:876082:1
position: 876082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:877020-877181:1:exon

position:877020:1
position: 877020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877181:1
position: 877181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:877424-877566:1:exon

position:877424:1
position: 877424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877566:1
position: 877566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:878459-878597:1:exon

position:878459:1
position: 878459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:878597:1
position: 878597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:879860-879943:1:exon

position:879860:1
position: 879860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879943:1
position: 879943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:880033-880152:1:exon

position:880033:1
position: 880033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880152:1
position: 880152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:880380-880496:1:exon

position:880380:1
position: 880380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880496:1
position: 880496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:880780-880939:1:exon

position:880780:1
position: 880780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880939:1
position: 880939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:881455-881551:1:exon

position:881455:1
position: 881455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:881551:1
position: 881551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:881782-881858:1:exon

position:881782:1
position: 881782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:881858:1
position: 881858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:883357-883860:1:exon

position:883357:1
position: 883357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HELLS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: HELLS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lymphoid-specific helicase
translation: MPAQNAGSSGEPLGAEMGEQAVITPAMLEEEEQLEAAGLEQERQMLEKARTTWDRESSEMRYKRLQHLLEKSNIYSKFLLTKMEQQQLEEQRRKEKLEKKREMMLKSAKGQNAVDGKEEKSGAKKKRGREDGTYNISEIMSKEEILSVAKKSKVENQEEGSSDNLCPEEVQKNRDSNSVIKDRLCQAVRHSAKHFLDPVRKFNGQPVPFQQPRIFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTIQCIATIALMVERGVPGPFLVCGPLSTLPNWMSEFKRFTPEIPLMLYHGAQQDRRKLVRKIHGRQGSLQIHPVVITSFEIAMRDRNALQQCFWKYLIVDEGHRIKNMNCRLIRELKRFNADNKLLLTGTPLQNNLAELWSLLNFLLPDVFDDLKSFESWFDITSITETAEDIIAKEREQNILHMLHQILTPFLLRRLKSDVALEVPPKREVVVYAPLAKKQETFYTAIVNRTIRKLLGSSEEEVVELSPTGRPKRRSRKVVDYCEEHIGSPDDVEKLISKMQEEVEKERPVVEVSIPVESEVNLKLQNIMMLLRKCCNHPYLIEYPLDPATQQFKVDEDLVKNSGKFLLLDRMLPELKKRGHKVLLFSQMTMMLDILMDYCYLRGFRFSRLDGSMSYSEREENMHQFNTDPEVFLFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLIIHKNQFKGGKSGLAQSKSCLDPQELLELLKSRDYEREVKGSKEKVISDKDLELLLDRSDLIAQMKTSDKMKKEKTGVFKVLEESSDPSAECVF
SIO_010081: HELLS
subclass of: SO_0000673
so part of: HELLS
location: join(867583..867613,868607..868719,871117..871239,871904..871963,872426..872462,872555..872619,872874..872915,873215..873439,873970..874152,874341..874484,875111..875307,875986..876082,877020..877181,877424..877566,878459..878597,879860..879943,880033..880152,880380..880496,880780..880939,881455..881551,881782..881858,883357..883454)
location: region:867583-883454:1
so has part: feature:867583-867613:1:exon
so has part: feature:868607-868719:1:exon
so has part: feature:871117-871239:1:exon
so has part: feature:871904-871963:1:exon
so has part: feature:872426-872462:1:exon
so has part: feature:872555-872619:1:exon
so has part: feature:872874-872915:1:exon
so has part: feature:873215-873439:1:exon
so has part: feature:873970-874152:1:exon
so has part: feature:874341-874484:1:exon
so has part: feature:875111-875307:1:exon
so has part: feature:875986-876082:1:exon
so has part: feature:877020-877181:1:exon
so has part: feature:877424-877566:1:exon
so has part: feature:878459-878597:1:exon
so has part: feature:879860-879943:1:exon
so has part: feature:880033-880152:1:exon
so has part: feature:880380-880496:1:exon
so has part: feature:880780-880939:1:exon
so has part: feature:881455-881551:1:exon
so has part: feature:881782-881858:1:exon
so has part: feature:883357-883454:1:exon

XP_030308730.1
type: Protein
SIO_000068: ncbiprotein

position:867583:1
position: 867583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:883454:1
position: 883454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:867583-867613:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:868607-868719:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:871117-871239:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:871904-871963:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:872426-872462:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:872555-872619:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:872874-872915:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:873215-873439:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:873970-874152:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:874341-874484:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:875111-875307:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:875986-876082:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:877020-877181:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:877424-877566:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:878459-878597:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:879860-879943:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:880033-880152:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:880380-880496:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:880780-880939:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:881455-881551:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:881782-881858:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:883357-883454:1:exon

PDLIM1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PDLIM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(884928..913094)
location: region:884928-913094:-1
so has part: feature:884928-913094:-1:exon
subclass of: SO_0000010

103537717
type: Gene
SIO_000068: ncbigene

position:884928:-1
position: 884928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:913094:-1
position: 913094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:884928-913094:-1:exon

PDLIM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PDLIM1
product: PDZ and LIM domain 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030452871.1
SIO_010081: PDLIM1
subclass of: SO_0000673
so part of: PDLIM1
location: complement(join(884928..885847,886744..886861,888768..888928,890287..890462,899284..899368,905137..905288,912930..913094))
location: region:884928-913094:-1
so has part: feature:912930-913094:-1:exon
so has part: feature:905137-905288:-1:exon
so has part: feature:899284-899368:-1:exon
so has part: feature:890287-890462:-1:exon
so has part: feature:888768-888928:-1:exon
so has part: feature:886744-886861:-1:exon
so has part: feature:884928-885847:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:912930-913094:-1:exon

position:912930:-1
position: 912930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:905137-905288:-1:exon

position:905137:-1
position: 905137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:905288:-1
position: 905288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:899284-899368:-1:exon

position:899284:-1
position: 899284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899368:-1
position: 899368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:890287-890462:-1:exon

position:890287:-1
position: 890287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:890462:-1
position: 890462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:888768-888928:-1:exon

position:888768:-1
position: 888768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888928:-1
position: 888928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:886744-886861:-1:exon

position:886744:-1
position: 886744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886861:-1
position: 886861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:884928-885847:-1:exon

position:885847:-1
position: 885847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PDLIM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PDLIM1
product: PDZ and LIM domain 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030452872.1
SIO_010081: PDLIM1
subclass of: SO_0000673
so part of: PDLIM1
location: complement(join(884928..885847,886744..886861,888771..888928,890287..890462,899284..899368,905137..905288,912930..913088))
location: region:884928-913088:-1
so has part: feature:912930-913088:-1:exon
so has part: feature:905137-905288:-1:exon
so has part: feature:899284-899368:-1:exon
so has part: feature:890287-890462:-1:exon
so has part: feature:888771-888928:-1:exon
so has part: feature:886744-886861:-1:exon
so has part: feature:884928-885847:-1:exon

position:913088:-1
position: 913088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:912930-913088:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:905137-905288:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:899284-899368:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:890287-890462:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:888771-888928:-1:exon

position:888771:-1
position: 888771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:886744-886861:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:884928-885847:-1:exon

PDLIM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PDLIM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PDZ and LIM domain protein 1 isoform X2
translation: MGTHSIVLTGPGPWGFRLVGGRDFEQPLAISRVTPGSKAALANLCTGDQIIAIDGVNTENMTHLEAQNKIKGCADELTLTVSRTESKVWSPLVTEEGKAHPYKMNLASQPQEMRPVGSAHNRSAVPFSAAPRVITAQYNSPAGLYSSENIQTFNNAVESKTSSPGATEPCSEQQHTQPLGSVAIDRQSEVYKMLQENQESNEPPRQSASFLVLQEILESEEKGDPTKPSGFRSVKAPTTKVASSIGNAQKLPMCEKCGSGIVGMFVKIRDKQRHPECYVCSDCGTNLKQKGHFFVEDQIYCEKHARERVIPPEGYEVVTVFPK
SIO_010081: PDLIM1
subclass of: SO_0000673
so part of: PDLIM1
location: complement(join(885661..885847,886744..886861,888771..888928,890287..890462,899284..899368,905137..905288,912930..913025))
location: region:885661-913025:-1
so has part: feature:912930-913025:-1:exon
so has part: feature:905137-905288:-1:exon
so has part: feature:899284-899368:-1:exon
so has part: feature:890287-890462:-1:exon
so has part: feature:888771-888928:-1:exon
so has part: feature:886744-886861:-1:exon
so has part: feature:885661-885847:-1:exon

XP_030308732.1
type: Protein
SIO_000068: ncbiprotein

position:885661:-1
position: 885661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:913025:-1
position: 913025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:912930-913025:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:905137-905288:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:899284-899368:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:890287-890462:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:888771-888928:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:886744-886861:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:885661-885847:-1:exon

PDLIM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PDLIM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PDZ and LIM domain protein 1 isoform X1
translation: MGTHSIVLTGPGPWGFRLVGGRDFEQPLAISRVTPGSKAALANLCTGDQIIAIDGVNTENMTHLEAQNKIKGCADELTLTVSRTESKVWSPLVTEEGKAHPYKMNLASQPQEMRPVGSAHNRSAVPFSAAPRVITAQYNSPAGLYSSENIQTFNNAVESKTSSPGATEPCSEQQHTQPLGSVAIDRQSEVYKMLQENQESNEPPRQSASFLVLQEILESEEKGGDPTKPSGFRSVKAPTTKVASSIGNAQKLPMCEKCGSGIVGMFVKIRDKQRHPECYVCSDCGTNLKQKGHFFVEDQIYCEKHARERVIPPEGYEVVTVFPK
SIO_010081: PDLIM1
subclass of: SO_0000673
so part of: PDLIM1
location: complement(join(885661..885847,886744..886861,888768..888928,890287..890462,899284..899368,905137..905288,912930..913025))
location: region:885661-913025:-1
so has part: feature:912930-913025:-1:exon
so has part: feature:905137-905288:-1:exon
so has part: feature:899284-899368:-1:exon
so has part: feature:890287-890462:-1:exon
so has part: feature:888768-888928:-1:exon
so has part: feature:886744-886861:-1:exon
so has part: feature:885661-885847:-1:exon

XP_030308731.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:912930-913025:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:905137-905288:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:899284-899368:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:890287-890462:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:888768-888928:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:886744-886861:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:885661-885847:-1:exon

SORBS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SORBS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(914497..1100027)
location: region:914497-1100027:-1
so has part: feature:914497-1100027:-1:exon
subclass of: SO_0000010

103537681
type: Gene
SIO_000068: ncbigene

position:914497:-1
position: 914497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1100027:-1
position: 1100027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:914497-1100027:-1:exon

SORBS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SORBS1
product: sorbin and SH3 domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030453736.1
SIO_010081: SORBS1
subclass of: SO_0000673
so part of: SORBS1
location: complement(join(914497..916676,917452..917564,918372..918430,919194..919253,923558..923674,924886..925548,927439..927633,928673..928798,928895..929009,929862..929908,931242..931409,932905..932993,936722..936897,938375..938424,939769..939870,946575..946689,947394..947523,947624..947671,951211..951273,951615..951689,952771..952833,957320..957461,960276..960647,961200..961994,964340..964455,964618..964644,966093..966212,969080..969175,971230..971295,971412..971467,1014459..1014517,1080903..1081087,1085903..1085959,1099113..1099173,1099941..1100027))
location: region:914497-1100027:-1
so has part: feature:1099941-1100027:-1:exon
so has part: feature:1099113-1099173:-1:exon
so has part: feature:1085903-1085959:-1:exon
so has part: feature:1080903-1081087:-1:exon
so has part: feature:1014459-1014517:-1:exon
so has part: feature:971412-971467:-1:exon
so has part: feature:971230-971295:-1:exon
so has part: feature:969080-969175:-1:exon
so has part: feature:966093-966212:-1:exon
so has part: feature:964618-964644:-1:exon
so has part: feature:964340-964455:-1:exon
so has part: feature:961200-961994:-1:exon
so has part: feature:960276-960647:-1:exon
so has part: feature:957320-957461:-1:exon
so has part: feature:952771-952833:-1:exon
so has part: feature:951615-951689:-1:exon
so has part: feature:951211-951273:-1:exon
so has part: feature:947624-947671:-1:exon
so has part: feature:947394-947523:-1:exon
so has part: feature:946575-946689:-1:exon
so has part: feature:939769-939870:-1:exon
so has part: feature:938375-938424:-1:exon
so has part: feature:936722-936897:-1:exon
so has part: feature:932905-932993:-1:exon
so has part: feature:931242-931409:-1:exon
so has part: feature:929862-929908:-1:exon
so has part: feature:928895-929009:-1:exon
so has part: feature:928673-928798:-1:exon
so has part: feature:927439-927633:-1:exon
so has part: feature:924886-925548:-1:exon
so has part: feature:923558-923674:-1:exon
so has part: feature:919194-919253:-1:exon
so has part: feature:918372-918430:-1:exon
so has part: feature:917452-917564:-1:exon
so has part: feature:914497-916676:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1099941-1100027:-1:exon

position:1099941:-1
position: 1099941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1099113-1099173:-1:exon

position:1099113:-1
position: 1099113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1099173:-1
position: 1099173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1085903-1085959:-1:exon

position:1085903:-1
position: 1085903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1085959:-1
position: 1085959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1080903-1081087:-1:exon

position:1080903:-1
position: 1080903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1081087:-1
position: 1081087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1014459-1014517:-1:exon

position:1014459:-1
position: 1014459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1014517:-1
position: 1014517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:971412-971467:-1:exon

position:971412:-1
position: 971412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:971467:-1
position: 971467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:971230-971295:-1:exon

position:971230:-1
position: 971230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:971295:-1
position: 971295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:969080-969175:-1:exon

position:969080:-1
position: 969080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:969175:-1
position: 969175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:966093-966212:-1:exon

position:966093:-1
position: 966093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:966212:-1
position: 966212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:964618-964644:-1:exon

position:964618:-1
position: 964618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:964644:-1
position: 964644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:964340-964455:-1:exon

position:964340:-1
position: 964340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:964455:-1
position: 964455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:961200-961994:-1:exon

position:961200:-1
position: 961200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:961994:-1
position: 961994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:960276-960647:-1:exon

position:960276:-1
position: 960276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:960647:-1
position: 960647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:957320-957461:-1:exon

position:957320:-1
position: 957320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:957461:-1
position: 957461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:952771-952833:-1:exon

position:952771:-1
position: 952771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:952833:-1
position: 952833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:951615-951689:-1:exon

position:951615:-1
position: 951615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:951689:-1
position: 951689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:951211-951273:-1:exon

position:951211:-1
position: 951211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:951273:-1
position: 951273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:947624-947671:-1:exon

position:947624:-1
position: 947624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:947671:-1
position: 947671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:947394-947523:-1:exon

position:947394:-1
position: 947394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:947523:-1
position: 947523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:946575-946689:-1:exon

position:946575:-1
position: 946575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:946689:-1
position: 946689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:939769-939870:-1:exon

position:939769:-1
position: 939769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:939870:-1
position: 939870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:938375-938424:-1:exon

position:938375:-1
position: 938375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:938424:-1
position: 938424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:936722-936897:-1:exon

position:936722:-1
position: 936722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:936897:-1
position: 936897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:932905-932993:-1:exon

position:932905:-1
position: 932905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:932993:-1
position: 932993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:931242-931409:-1:exon

position:931242:-1
position: 931242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:931409:-1
position: 931409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:929862-929908:-1:exon

position:929862:-1
position: 929862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:929908:-1
position: 929908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:928895-929009:-1:exon

position:928895:-1
position: 928895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:929009:-1
position: 929009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:928673-928798:-1:exon

position:928673:-1
position: 928673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:928798:-1
position: 928798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:927439-927633:-1:exon

position:927439:-1
position: 927439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:927633:-1
position: 927633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:924886-925548:-1:exon

position:924886:-1
position: 924886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:925548:-1
position: 925548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:923558-923674:-1:exon

position:923558:-1
position: 923558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:923674:-1
position: 923674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:919194-919253:-1:exon

position:919194:-1
position: 919194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919253:-1
position: 919253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:918372-918430:-1:exon

position:918372:-1
position: 918372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:918430:-1
position: 918430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:917452-917564:-1:exon

position:917452:-1
position: 917452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:917564:-1
position: 917564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:914497-916676:-1:exon

position:916676:-1
position: 916676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SORBS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SORBS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorbin and SH3 domain-containing protein 1
translation: MQSHQMEEEPRTYLWSCDFSFSKLCPREKQNPEVKKASPPATMSSEPEEIDVGKTVVNGLSSHGQEKAVGVPLCTRSISAVKIIPVKKVKTSPHLVLPTEIDPSKVCSGKGAVTLRASPAYQESQTVPSPCPQDVEQPESLEPETPETDDWRSSSSADANGDAQPSSLAAKGYRSVRPNLSSDTKPQALAPPRPPLPKEESFAWRPRADPRPTNLLPVPIMDCVYLSAPKPYPQRAAPSATAGCHFTSPTPHGDIPSGQQGCSPSPADGAPAGQPLPDARSWSGAWSSSLQHNPGRAGPGSQAGTDSSHEKKADKKVSKLYVACLSNSTCSAAAENSPGTAHDPAGSASLGAELTQAPATDIVSSVTDPGKSLPAPPPPPVPPRPYCYIVLSKDPVSHGAGRPDRTQPPPPQAVRDRVVEPPSTAATGDRMRAEPCLPQQRQPPSKAMGHSMDATATTTAQPGVIVVPLLQVNPDRQQEGSSSTPPPPLVPFGQGSVSPETVSSGSPLTFPTLDDFIPPHLQRGSHHNQAPSASGTLPSVYPKLPFFSTPPSLLPPVTGALHRGLKPESTGVISHTDPGPLLNEVSQRGTDHPTSFTSINKSSSAYPSTTIVNPTIVLLQHNREHRQIQGLYKTMFKQIHKLNRDTPEENPYCPTYIFPELPEIQQKTEEDNPYSPTYQFPASTPSPISEDEDSDSYSPRYSYSENSRTQLSVPRSKSEMDNIDPEKVVKRSATLPLPNRTSSLKASPERTDWEPPDKKVDTRKYRAEPRSIYDYQPGKSSVLNNEKMTDLEKDLYLYQTELEADLEKMEKLYKAPHKKPQKNAAGGAPLETSTDHSSYSTYSPNYHPVKRESEPALGDPAGLENERQIYKSVLEGGDIPFQGLSGLKRPSSSASTKVDSESPRHFAPVDYMETPEEILRRRHDDKEKLLEDQRRLKREQEEADIAARRHTGVIPTHHQFITNERFGDLLNIDDTAKRKSGSEMRPARAKFDFKAQTLKELPLQKGDIVYIYKQIDQNWYEGEHHGRVGIFPRSYIELLPPAEKAQPKKPLPLQVLEYGDAIAKFNFNGDTQVEMSFRKGERITLIRRVDENWYEGRISGTSRQGIFPVTYVEVLKRPVVKNAIEYPDPPLPLSPSRSMTASPQSPSSELLHTPTPPPLPFPRRALSPEVQAVTSEWIALTVGVSPPTTPAVTPPLPPPPEASLWPPAASSPSSHPHPSGSSTPRSIRSPLPSSSSRLQPSAAPQSKEKWLGSPSSSYSDSPRWGVESPQNLLAEPAGSQAWLQKPREGSSTPEQAAPALPNISSERCLKPSQVETRGSPGRRALSSSGDNQLCQELMAIVQGGTGEKRGVRKGDLGKFQSGEKKTADSKAFSSSAPLSSSALPSSTVTTQPPPRLTRRVNKPQPSHHSLRAGPDLTESEKSYVQPQAQQQGASPDRSQTPRDIVSYQALYSYTPQNDDELELRDGDIVDVMEKCDDGWFVGTSRRTRQFGTFPGNYVKLLYL
SIO_010081: SORBS1
subclass of: SO_0000673
so part of: SORBS1
location: complement(join(916609..916676,917452..917564,918372..918430,919194..919253,923558..923674,924886..925548,927439..927633,928673..928798,928895..929009,929862..929908,931242..931409,932905..932993,936722..936897,938375..938424,939769..939870,946575..946689,947394..947523,947624..947671,951211..951273,951615..951689,952771..952833,957320..957461,960276..960647,961200..961994,964340..964455,964618..964644,966093..966212,969080..969175,971230..971295,971412..971467,1014459..1014517,1080903..1080923))
location: region:916609-1080923:-1
so has part: feature:1080903-1080923:-1:exon
so has part: feature:1014459-1014517:-1:exon
so has part: feature:971412-971467:-1:exon
so has part: feature:971230-971295:-1:exon
so has part: feature:969080-969175:-1:exon
so has part: feature:966093-966212:-1:exon
so has part: feature:964618-964644:-1:exon
so has part: feature:964340-964455:-1:exon
so has part: feature:961200-961994:-1:exon
so has part: feature:960276-960647:-1:exon
so has part: feature:957320-957461:-1:exon
so has part: feature:952771-952833:-1:exon
so has part: feature:951615-951689:-1:exon
so has part: feature:951211-951273:-1:exon
so has part: feature:947624-947671:-1:exon
so has part: feature:947394-947523:-1:exon
so has part: feature:946575-946689:-1:exon
so has part: feature:939769-939870:-1:exon
so has part: feature:938375-938424:-1:exon
so has part: feature:936722-936897:-1:exon
so has part: feature:932905-932993:-1:exon
so has part: feature:931242-931409:-1:exon
so has part: feature:929862-929908:-1:exon
so has part: feature:928895-929009:-1:exon
so has part: feature:928673-928798:-1:exon
so has part: feature:927439-927633:-1:exon
so has part: feature:924886-925548:-1:exon
so has part: feature:923558-923674:-1:exon
so has part: feature:919194-919253:-1:exon
so has part: feature:918372-918430:-1:exon
so has part: feature:917452-917564:-1:exon
so has part: feature:916609-916676:-1:exon

XP_030309596.1
type: Protein
SIO_000068: ncbiprotein

position:916609:-1
position: 916609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1080923:-1
position: 1080923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1080903-1080923:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1014459-1014517:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:971412-971467:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:971230-971295:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:969080-969175:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:966093-966212:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:964618-964644:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:964340-964455:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:961200-961994:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:960276-960647:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:957320-957461:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:952771-952833:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:951615-951689:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:951211-951273:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:947624-947671:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:947394-947523:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:946575-946689:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:939769-939870:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:938375-938424:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:936722-936897:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:932905-932993:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:931242-931409:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:929862-929908:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:928895-929009:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:928673-928798:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:927439-927633:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:924886-925548:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:923558-923674:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:919194-919253:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:918372-918430:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:917452-917564:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:916609-916676:-1:exon

LOC115598557
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115598557
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(933107..935737)
location: region:933107-935737:-1
so has part: feature:933107-935737:-1:exon
subclass of: SO_0000010

115598557
type: Gene
SIO_000068: ncbigene

position:933107:-1
position: 933107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:935737:-1
position: 935737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:933107-935737:-1:exon

LOC115598557
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC115598557
product: sorbin and SH3 domain-containing protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030453737.1
SIO_010081: LOC115598557
subclass of: SO_0000673
so part of: LOC115598557
location: complement(933107..935737)
location: region:933107-935737:-1
so has part: feature:933107-935737:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:933107-935737:-1:exon

LOC115598557
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC115598557
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorbin and SH3 domain-containing protein 1-like
translation: MFFLLSRWLSSTFQLTRLYLFYPACLPVDRKGGNAHMTAPSSVSSRTFNANHTGMLGHACKHKKPLSAAKACITEILPSKFKPKLAAAPAALGQDKKGILLSQEKAQSCENLRSSVALFEHQKAFMVGVGESLENVLMKSKQEYAIKSGSTLSLQEYGTNPPKGSLFPAPRKMEFTVLYKDMHQINRARIQLSAVSSCSVRDLASQFENEAKDRLEHGLSREESEQIPKDTVSSRVSAFEQLIQRSRSMPSLDFSAVQNRFTASLRPKACLTSAYSAEFLLELPKAHQEEKDAASLAEKSSRSCSNVEDTGSDGSEAIPMDTLSACTDEVDLLSNASNDSGGSSNLNGPQKHKISRCKGSCPASYTRFTTIRRHEQQQQQASRNPGSKGDVFGDGRLLPRNVYLMSPLPFRLKKPFQHKSCRTPPPDCLGNLAVPSPENPADPIQLQGNVGDKSHHSQHQLCSRSRPLAPRRLSSYDIVERLSCFPTTASSRDSFMGRAATPDSLNNGNPGPYALSHSLDTNNNPQNELGMYPRGGFLCSLPVSLHPSSGFPPSPLFLPQPLHFESPPLHPPPLSLPSPPRVCLVSLACLAEQF
SIO_010081: LOC115598557
subclass of: SO_0000673
so part of: LOC115598557
location: complement(933486..935270)
location: region:933486-935270:-1
so has part: feature:933486-935270:-1:exon

XP_030309597.1
type: Protein
SIO_000068: ncbiprotein

position:933486:-1
position: 933486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:935270:-1
position: 935270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:933486-935270:-1:exon

EIF3F
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: EIF3F
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1091199..1095847
location: region:1091199-1095847:1
so has part: feature:1091199-1095847:1:exon
subclass of: SO_0000010

103537718
type: Gene
SIO_000068: ncbigene

position:1091199:1
position: 1091199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1095847:1
position: 1095847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1091199-1095847:1:exon

EIF3F
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: EIF3F
product: eukaryotic translation initiation factor 3 subunit F, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030453749.1
SIO_010081: EIF3F
subclass of: SO_0000673
so part of: EIF3F
location: join(1091199..1091241,1091281..1091514,1091609..1091679,1091790..1091869,1092829..1092966,1093986..1094077,1094300..1094436,1094582..1094695,1095446..1095847)
location: region:1091199-1095847:1
so has part: feature:1091199-1091241:1:exon
so has part: feature:1091281-1091514:1:exon
so has part: feature:1091609-1091679:1:exon
so has part: feature:1091790-1091869:1:exon
so has part: feature:1092829-1092966:1:exon
so has part: feature:1093986-1094077:1:exon
so has part: feature:1094300-1094436:1:exon
so has part: feature:1094582-1094695:1:exon
so has part: feature:1095446-1095847:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1091199-1091241:1:exon

position:1091241:1
position: 1091241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1091281-1091514:1:exon

position:1091281:1
position: 1091281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1091514:1
position: 1091514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1091609-1091679:1:exon

position:1091609:1
position: 1091609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1091679:1
position: 1091679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1091790-1091869:1:exon

position:1091790:1
position: 1091790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1091869:1
position: 1091869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1092829-1092966:1:exon

position:1092829:1
position: 1092829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1092966:1
position: 1092966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1093986-1094077:1:exon

position:1093986:1
position: 1093986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1094077:1
position: 1094077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1094300-1094436:1:exon

position:1094300:1
position: 1094300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1094436:1
position: 1094436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1094582-1094695:1:exon

position:1094582:1
position: 1094582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1094695:1
position: 1094695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1095446-1095847:1:exon

position:1095446:1
position: 1095446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EIF3F
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: EIF3F
product: eukaryotic translation initiation factor 3 subunit F, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 ESTs, 1 long SRA read, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030453748.1
SIO_010081: EIF3F
subclass of: SO_0000673
so part of: EIF3F
location: join(1091200..1091514,1091609..1091679,1091790..1091869,1092829..1092966,1093986..1094077,1094300..1094436,1094582..1094695,1095446..1095847)
location: region:1091200-1095847:1
so has part: feature:1091200-1091514:1:exon
so has part: feature:1091609-1091679:1:exon
so has part: feature:1091790-1091869:1:exon
so has part: feature:1092829-1092966:1:exon
so has part: feature:1093986-1094077:1:exon
so has part: feature:1094300-1094436:1:exon
so has part: feature:1094582-1094695:1:exon
so has part: feature:1095446-1095847:1:exon

position:1091200:1
position: 1091200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1091200-1091514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1091609-1091679:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1091790-1091869:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1092829-1092966:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1093986-1094077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1094300-1094436:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1094582-1094695:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1095446-1095847:1:exon

EIF3F
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: EIF3F
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 3 subunit F isoform X1
translation: MAATAPAPAPPAAAPAQPPAAAPATPAGNAPSAAAATTAPPPPATPAPPPPAPPLSAALSGPFPGGRVVRLHPVVLASIVDSFERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPSEIILGWYATGHDITEHSVLIHEYYSREAHNPIHLTVDTSLQNSRMSIKAYVSAPMGVPGKTMGVMFTPLTVKYVYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQVGSASARIQDTLTMVLQYAEDVLSGKVAADNTVGRFLMDLINQVPKISPEDFETMLNSNINDLLMVTYLANLTQSQIALNEKLLSL
SIO_010081: EIF3F
subclass of: SO_0000673
so part of: EIF3F
location: join(1091220..1091514,1091609..1091679,1091790..1091869,1092829..1092966,1093986..1094077,1094300..1094436,1094582..1094695,1095446..1095523)
location: region:1091220-1095523:1
so has part: feature:1091220-1091514:1:exon
so has part: feature:1091609-1091679:1:exon
so has part: feature:1091790-1091869:1:exon
so has part: feature:1092829-1092966:1:exon
so has part: feature:1093986-1094077:1:exon
so has part: feature:1094300-1094436:1:exon
so has part: feature:1094582-1094695:1:exon
so has part: feature:1095446-1095523:1:exon

XP_030309608.1
type: Protein
SIO_000068: ncbiprotein

position:1091220:1
position: 1091220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1095523:1
position: 1095523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1091220-1091514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1091609-1091679:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1091790-1091869:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1092829-1092966:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1093986-1094077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1094300-1094436:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1094582-1094695:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1095446-1095523:1:exon

EIF3F
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: EIF3F
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 3 subunit F isoform X2
translation: MAATAPAPAPATPAGNAPSAAAATTAPPPPATPAPPPPAPPLSAALSGPFPGGRVVRLHPVVLASIVDSFERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPSEIILGWYATGHDITEHSVLIHEYYSREAHNPIHLTVDTSLQNSRMSIKAYVSAPMGVPGKTMGVMFTPLTVKYVYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQVGSASARIQDTLTMVLQYAEDVLSGKVAADNTVGRFLMDLINQVPKISPEDFETMLNSNINDLLMVTYLANLTQSQIALNEKLLSL
SIO_010081: EIF3F
subclass of: SO_0000673
so part of: EIF3F
location: join(1091220..1091241,1091281..1091514,1091609..1091679,1091790..1091869,1092829..1092966,1093986..1094077,1094300..1094436,1094582..1094695,1095446..1095523)
location: region:1091220-1095523:1
so has part: feature:1091220-1091241:1:exon
so has part: feature:1091281-1091514:1:exon
so has part: feature:1091609-1091679:1:exon
so has part: feature:1091790-1091869:1:exon
so has part: feature:1092829-1092966:1:exon
so has part: feature:1093986-1094077:1:exon
so has part: feature:1094300-1094436:1:exon
so has part: feature:1094582-1094695:1:exon
so has part: feature:1095446-1095523:1:exon

XP_030309609.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1091220-1091241:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1091281-1091514:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1091609-1091679:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1091790-1091869:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1092829-1092966:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1093986-1094077:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1094300-1094436:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1094582-1094695:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1095446-1095523:1:exon

ANXA7
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ANXA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1099298..1111578
location: region:1099298-1111578:1
so has part: feature:1099298-1111578:1:exon
subclass of: SO_0000010

103537682
type: Gene
SIO_000068: ncbigene

position:1099298:1
position: 1099298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1111578:1
position: 1111578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1099298-1111578:1:exon

ANXA7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ANXA7
product: annexin A7, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 1 long SRA read, 44 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030453744.1
SIO_010081: ANXA7
subclass of: SO_0000673
so part of: ANXA7
location: join(1099298..1099387,1102377..1102434,1104362..1104575,1104733..1104840,1105825..1105865,1106159..1106261,1106541..1106635,1107374..1107487,1108425..1108595,1109911..1110081,1110167..1110242,1110893..1111005,1111228..1111578)
location: region:1099298-1111578:1
so has part: feature:1099298-1099387:1:exon
so has part: feature:1102377-1102434:1:exon
so has part: feature:1104362-1104575:1:exon
so has part: feature:1104733-1104840:1:exon
so has part: feature:1105825-1105865:1:exon
so has part: feature:1106159-1106261:1:exon
so has part: feature:1106541-1106635:1:exon
so has part: feature:1107374-1107487:1:exon
so has part: feature:1108425-1108595:1:exon
so has part: feature:1109911-1110081:1:exon
so has part: feature:1110167-1110242:1:exon
so has part: feature:1110893-1111005:1:exon
so has part: feature:1111228-1111578:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1099298-1099387:1:exon

position:1099387:1
position: 1099387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1102377-1102434:1:exon

position:1102377:1
position: 1102377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1102434:1
position: 1102434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1104362-1104575:1:exon

position:1104362:1
position: 1104362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1104575:1
position: 1104575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1104733-1104840:1:exon

position:1104733:1
position: 1104733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1104840:1
position: 1104840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1105825-1105865:1:exon

position:1105825:1
position: 1105825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1105865:1
position: 1105865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1106159-1106261:1:exon

position:1106159:1
position: 1106159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1106261:1
position: 1106261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1106541-1106635:1:exon

position:1106541:1
position: 1106541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1106635:1
position: 1106635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1107374-1107487:1:exon

position:1107374:1
position: 1107374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1107487:1
position: 1107487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1108425-1108595:1:exon

position:1108425:1
position: 1108425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1108595:1
position: 1108595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1109911-1110081:1:exon

position:1109911:1
position: 1109911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1110081:1
position: 1110081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1110167-1110242:1:exon

position:1110167:1
position: 1110167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1110242:1
position: 1110242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1110893-1111005:1:exon

position:1110893:1
position: 1110893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1111005:1
position: 1111005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1111228-1111578:1:exon

position:1111228:1
position: 1111228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ANXA7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ANXA7
product: annexin A7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 44 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030453743.1
SIO_010081: ANXA7
subclass of: SO_0000673
so part of: ANXA7
location: join(1099323..1099387,1099800..1099924,1102377..1102434,1104362..1104575,1104733..1104840,1105825..1105865,1106159..1106261,1106541..1106635,1107374..1107487,1108425..1108595,1109911..1110081,1110167..1110242,1110893..1111005,1111228..1111578)
location: region:1099323-1111578:1
so has part: feature:1099323-1099387:1:exon
so has part: feature:1099800-1099924:1:exon
so has part: feature:1102377-1102434:1:exon
so has part: feature:1104362-1104575:1:exon
so has part: feature:1104733-1104840:1:exon
so has part: feature:1105825-1105865:1:exon
so has part: feature:1106159-1106261:1:exon
so has part: feature:1106541-1106635:1:exon
so has part: feature:1107374-1107487:1:exon
so has part: feature:1108425-1108595:1:exon
so has part: feature:1109911-1110081:1:exon
so has part: feature:1110167-1110242:1:exon
so has part: feature:1110893-1111005:1:exon
so has part: feature:1111228-1111578:1:exon

position:1099323:1
position: 1099323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1099323-1099387:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1099800-1099924:1:exon

position:1099800:1
position: 1099800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1099924:1
position: 1099924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1102377-1102434:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1104362-1104575:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1104733-1104840:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1105825-1105865:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1106159-1106261:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1106541-1106635:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1107374-1107487:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1108425-1108595:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1109911-1110081:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1110167-1110242:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1110893-1111005:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1111228-1111578:1:exon

ANXA7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ANXA7
product: annexin A7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 44 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030453742.1
SIO_010081: ANXA7
subclass of: SO_0000673
so part of: ANXA7
location: join(1099761..1099924,1102377..1102434,1104362..1104575,1104733..1104840,1105825..1105865,1106159..1106261,1106541..1106635,1107374..1107487,1108425..1108595,1109911..1110081,1110167..1110242,1110893..1111005,1111228..1111578)
location: region:1099761-1111578:1
so has part: feature:1099761-1099924:1:exon
so has part: feature:1102377-1102434:1:exon
so has part: feature:1104362-1104575:1:exon
so has part: feature:1104733-1104840:1:exon
so has part: feature:1105825-1105865:1:exon
so has part: feature:1106159-1106261:1:exon
so has part: feature:1106541-1106635:1:exon
so has part: feature:1107374-1107487:1:exon
so has part: feature:1108425-1108595:1:exon
so has part: feature:1109911-1110081:1:exon
so has part: feature:1110167-1110242:1:exon
so has part: feature:1110893-1111005:1:exon
so has part: feature:1111228-1111578:1:exon

position:1099761:1
position: 1099761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1099761-1099924:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1102377-1102434:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1104362-1104575:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1104733-1104840:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1105825-1105865:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1106159-1106261:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1106541-1106635:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1107374-1107487:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1108425-1108595:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1109911-1110081:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1110167-1110242:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1110893-1111005:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1111228-1111578:1:exon

ANXA7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ANXA7
product: annexin A7, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 44 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030453745.1
SIO_010081: ANXA7
subclass of: SO_0000673
so part of: ANXA7
location: join(1099761..1099924,1102377..1102434,1104362..1104575,1104733..1104840,1105828..1105865,1106159..1106261,1106541..1106635,1107374..1107487,1108425..1108595,1109911..1110081,1110167..1110242,1110893..1111005,1111228..1111578)
location: region:1099761-1111578:1
so has part: feature:1099761-1099924:1:exon
so has part: feature:1102377-1102434:1:exon
so has part: feature:1104362-1104575:1:exon
so has part: feature:1104733-1104840:1:exon
so has part: feature:1105828-1105865:1:exon
so has part: feature:1106159-1106261:1:exon
so has part: feature:1106541-1106635:1:exon
so has part: feature:1107374-1107487:1:exon
so has part: feature:1108425-1108595:1:exon
so has part: feature:1109911-1110081:1:exon
so has part: feature:1110167-1110242:1:exon
so has part: feature:1110893-1111005:1:exon
so has part: feature:1111228-1111578:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1099761-1099924:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1102377-1102434:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1104362-1104575:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1104733-1104840:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1105828-1105865:1:exon

position:1105828:1
position: 1105828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1106159-1106261:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1106541-1106635:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1107374-1107487:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1108425-1108595:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1109911-1110081:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1110167-1110242:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1110893-1111005:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1111228-1111578:1:exon

ANXA7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ANXA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: annexin A7 isoform X1
translation: MSYPGYPPSGGYPAFPGYPPTGQESYPPAGQFSYPAVPGGYPPAGGGTFPAAPPTAGFPAPGGFPAPGGFPAPGGYTGAPQAGGMPPYPGAPTAPGFGVPPAGPGFGGYQQPSAQSYAGGGPAQIPVGYGGQAPSPMPAPPAAMVQCTQGTIQAAPDFNAERDAEILRKAMKGFGTDEQAIINVVANRSNDQRQKIKAAFKTMYGKDLIKDLKSELSGNIEELILALFMPGTYYDAWSLRHAMKGAGTQERVLIEILCTRTNQEIREIVNCYKSEFGRDIEQDIRSDTSGHFERLLVSMCQGNRDETQTVDYQKAQEDAQRLYQAGEGKLGTDESCFNMVLATRSFPQLKATVEAYSRIANRDLLSSIDREFSGNVERGLKAILQCALNRPAFFAERLYHSMKGAGTDDSTLIRIIVTRSEIDLVQIKQMFTQMYQKTLATMIASDTSGDYRRLLLAIVGQ
SIO_010081: ANXA7
subclass of: SO_0000673
so part of: ANXA7
location: join(1102378..1102434,1104362..1104575,1104733..1104840,1105825..1105865,1106159..1106261,1106541..1106635,1107374..1107487,1108425..1108595,1109911..1110081,1110167..1110242,1110893..1111005,1111228..1111350)
location: region:1102378-1111350:1
so has part: feature:1102378-1102434:1:exon
so has part: feature:1104362-1104575:1:exon
so has part: feature:1104733-1104840:1:exon
so has part: feature:1105825-1105865:1:exon
so has part: feature:1106159-1106261:1:exon
so has part: feature:1106541-1106635:1:exon
so has part: feature:1107374-1107487:1:exon
so has part: feature:1108425-1108595:1:exon
so has part: feature:1109911-1110081:1:exon
so has part: feature:1110167-1110242:1:exon
so has part: feature:1110893-1111005:1:exon
so has part: feature:1111228-1111350:1:exon

XP_030309602.1
type: Protein
SIO_000068: ncbiprotein

position:1102378:1
position: 1102378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1111350:1
position: 1111350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1102378-1102434:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1104362-1104575:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1104733-1104840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1105825-1105865:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1106159-1106261:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1106541-1106635:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1107374-1107487:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1108425-1108595:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1109911-1110081:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1110167-1110242:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1110893-1111005:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1111228-1111350:1:exon

ANXA7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ANXA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: annexin A7 isoform X1
translation: MSYPGYPPSGGYPAFPGYPPTGQESYPPAGQFSYPAVPGGYPPAGGGTFPAAPPTAGFPAPGGFPAPGGFPAPGGYTGAPQAGGMPPYPGAPTAPGFGVPPAGPGFGGYQQPSAQSYAGGGPAQIPVGYGGQAPSPMPAPPAAMVQCTQGTIQAAPDFNAERDAEILRKAMKGFGTDEQAIINVVANRSNDQRQKIKAAFKTMYGKDLIKDLKSELSGNIEELILALFMPGTYYDAWSLRHAMKGAGTQERVLIEILCTRTNQEIREIVNCYKSEFGRDIEQDIRSDTSGHFERLLVSMCQGNRDETQTVDYQKAQEDAQRLYQAGEGKLGTDESCFNMVLATRSFPQLKATVEAYSRIANRDLLSSIDREFSGNVERGLKAILQCALNRPAFFAERLYHSMKGAGTDDSTLIRIIVTRSEIDLVQIKQMFTQMYQKTLATMIASDTSGDYRRLLLAIVGQ
SIO_010081: ANXA7
subclass of: SO_0000673
so part of: ANXA7
location: join(1102378..1102434,1104362..1104575,1104733..1104840,1105825..1105865,1106159..1106261,1106541..1106635,1107374..1107487,1108425..1108595,1109911..1110081,1110167..1110242,1110893..1111005,1111228..1111350)
location: region:1102378-1111350:1
so has part: feature:1102378-1102434:1:exon
so has part: feature:1104362-1104575:1:exon
so has part: feature:1104733-1104840:1:exon
so has part: feature:1105825-1105865:1:exon
so has part: feature:1106159-1106261:1:exon
so has part: feature:1106541-1106635:1:exon
so has part: feature:1107374-1107487:1:exon
so has part: feature:1108425-1108595:1:exon
so has part: feature:1109911-1110081:1:exon
so has part: feature:1110167-1110242:1:exon
so has part: feature:1110893-1111005:1:exon
so has part: feature:1111228-1111350:1:exon

XP_030309603.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1102378-1102434:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1104362-1104575:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1104733-1104840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1105825-1105865:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1106159-1106261:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1106541-1106635:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1107374-1107487:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1108425-1108595:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1109911-1110081:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1110167-1110242:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1110893-1111005:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1111228-1111350:1:exon

ANXA7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ANXA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: annexin A7 isoform X1
translation: MSYPGYPPSGGYPAFPGYPPTGQESYPPAGQFSYPAVPGGYPPAGGGTFPAAPPTAGFPAPGGFPAPGGFPAPGGYTGAPQAGGMPPYPGAPTAPGFGVPPAGPGFGGYQQPSAQSYAGGGPAQIPVGYGGQAPSPMPAPPAAMVQCTQGTIQAAPDFNAERDAEILRKAMKGFGTDEQAIINVVANRSNDQRQKIKAAFKTMYGKDLIKDLKSELSGNIEELILALFMPGTYYDAWSLRHAMKGAGTQERVLIEILCTRTNQEIREIVNCYKSEFGRDIEQDIRSDTSGHFERLLVSMCQGNRDETQTVDYQKAQEDAQRLYQAGEGKLGTDESCFNMVLATRSFPQLKATVEAYSRIANRDLLSSIDREFSGNVERGLKAILQCALNRPAFFAERLYHSMKGAGTDDSTLIRIIVTRSEIDLVQIKQMFTQMYQKTLATMIASDTSGDYRRLLLAIVGQ
SIO_010081: ANXA7
subclass of: SO_0000673
so part of: ANXA7
location: join(1102378..1102434,1104362..1104575,1104733..1104840,1105825..1105865,1106159..1106261,1106541..1106635,1107374..1107487,1108425..1108595,1109911..1110081,1110167..1110242,1110893..1111005,1111228..1111350)
location: region:1102378-1111350:1
so has part: feature:1102378-1102434:1:exon
so has part: feature:1104362-1104575:1:exon
so has part: feature:1104733-1104840:1:exon
so has part: feature:1105825-1105865:1:exon
so has part: feature:1106159-1106261:1:exon
so has part: feature:1106541-1106635:1:exon
so has part: feature:1107374-1107487:1:exon
so has part: feature:1108425-1108595:1:exon
so has part: feature:1109911-1110081:1:exon
so has part: feature:1110167-1110242:1:exon
so has part: feature:1110893-1111005:1:exon
so has part: feature:1111228-1111350:1:exon

XP_030309604.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1102378-1102434:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1104362-1104575:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1104733-1104840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1105825-1105865:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1106159-1106261:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1106541-1106635:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1107374-1107487:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1108425-1108595:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1109911-1110081:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1110167-1110242:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1110893-1111005:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1111228-1111350:1:exon

ANXA7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ANXA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: annexin A7 isoform X2
translation: MSYPGYPPSGGYPAFPGYPPTGQESYPPAGQFSYPAVPGGYPPAGGGTFPAAPPTAGFPAPGGFPAPGGFPAPGGYTGAPQAGGMPPYPGAPTAPGFGVPPAGPGFGGYQQPSAQSYAGGGPAQIPGYGGQAPSPMPAPPAAMVQCTQGTIQAAPDFNAERDAEILRKAMKGFGTDEQAIINVVANRSNDQRQKIKAAFKTMYGKDLIKDLKSELSGNIEELILALFMPGTYYDAWSLRHAMKGAGTQERVLIEILCTRTNQEIREIVNCYKSEFGRDIEQDIRSDTSGHFERLLVSMCQGNRDETQTVDYQKAQEDAQRLYQAGEGKLGTDESCFNMVLATRSFPQLKATVEAYSRIANRDLLSSIDREFSGNVERGLKAILQCALNRPAFFAERLYHSMKGAGTDDSTLIRIIVTRSEIDLVQIKQMFTQMYQKTLATMIASDTSGDYRRLLLAIVGQ
SIO_010081: ANXA7
subclass of: SO_0000673
so part of: ANXA7
location: join(1102378..1102434,1104362..1104575,1104733..1104840,1105828..1105865,1106159..1106261,1106541..1106635,1107374..1107487,1108425..1108595,1109911..1110081,1110167..1110242,1110893..1111005,1111228..1111350)
location: region:1102378-1111350:1
so has part: feature:1102378-1102434:1:exon
so has part: feature:1104362-1104575:1:exon
so has part: feature:1104733-1104840:1:exon
so has part: feature:1105828-1105865:1:exon
so has part: feature:1106159-1106261:1:exon
so has part: feature:1106541-1106635:1:exon
so has part: feature:1107374-1107487:1:exon
so has part: feature:1108425-1108595:1:exon
so has part: feature:1109911-1110081:1:exon
so has part: feature:1110167-1110242:1:exon
so has part: feature:1110893-1111005:1:exon
so has part: feature:1111228-1111350:1:exon

XP_030309605.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1102378-1102434:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1104362-1104575:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1104733-1104840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1105828-1105865:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1106159-1106261:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1106541-1106635:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1107374-1107487:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1108425-1108595:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1109911-1110081:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1110167-1110242:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1110893-1111005:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1111228-1111350:1:exon

ANXA7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ANXA7
product: annexin A7, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030453746.1
SIO_010081: ANXA7
subclass of: SO_0000673
so part of: ANXA7
location: join(1102379..1102434,1105825..1105865,1106159..1106261,1106541..1106635,1107374..1107487,1108425..1108595,1109911..1110081,1110167..1110242,1110893..1111005,1111228..1111578)
location: region:1102379-1111578:1
so has part: feature:1102379-1102434:1:exon
so has part: feature:1105825-1105865:1:exon
so has part: feature:1106159-1106261:1:exon
so has part: feature:1106541-1106635:1:exon
so has part: feature:1107374-1107487:1:exon
so has part: feature:1108425-1108595:1:exon
so has part: feature:1109911-1110081:1:exon
so has part: feature:1110167-1110242:1:exon
so has part: feature:1110893-1111005:1:exon
so has part: feature:1111228-1111578:1:exon

position:1102379:1
position: 1102379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1102379-1102434:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1105825-1105865:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1106159-1106261:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1106541-1106635:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1107374-1107487:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1108425-1108595:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1109911-1110081:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1110167-1110242:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1110893-1111005:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1111228-1111578:1:exon

ANXA7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ANXA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: annexin A7 isoform X3
translation: MPAPPAAMVQCTQGTIQAAPDFNAERDAEILRKAMKGFGTDEQAIINVVANRSNDQRQKIKAAFKTMYGKDLIKDLKSELSGNIEELILALFMPGTYYDAWSLRHAMKGAGTQERVLIEILCTRTNQEIREIVNCYKSEFGRDIEQDIRSDTSGHFERLLVSMCQGNRDETQTVDYQKAQEDAQRLYQAGEGKLGTDESCFNMVLATRSFPQLKATVEAYSRIANRDLLSSIDREFSGNVERGLKAILQCALNRPAFFAERLYHSMKGAGTDDSTLIRIIVTRSEIDLVQIKQMFTQMYQKTLATMIASDTSGDYRRLLLAIVGQ
SIO_010081: ANXA7
subclass of: SO_0000673
so part of: ANXA7
location: join(1105854..1105865,1106159..1106261,1106541..1106635,1107374..1107487,1108425..1108595,1109911..1110081,1110167..1110242,1110893..1111005,1111228..1111350)
location: region:1105854-1111350:1
so has part: feature:1105854-1105865:1:exon
so has part: feature:1106159-1106261:1:exon
so has part: feature:1106541-1106635:1:exon
so has part: feature:1107374-1107487:1:exon
so has part: feature:1108425-1108595:1:exon
so has part: feature:1109911-1110081:1:exon
so has part: feature:1110167-1110242:1:exon
so has part: feature:1110893-1111005:1:exon
so has part: feature:1111228-1111350:1:exon

XP_030309606.1
type: Protein
SIO_000068: ncbiprotein

position:1105854:1
position: 1105854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1105854-1105865:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1106159-1106261:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1106541-1106635:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1107374-1107487:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1108425-1108595:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1109911-1110081:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1110167-1110242:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1110893-1111005:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1111228-1111350:1:exon

PPP3CB
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PPP3CB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1109608..1149688)
location: region:1109608-1149688:-1
so has part: feature:1109608-1149688:-1:exon
subclass of: SO_0000010

103537684
type: Gene
SIO_000068: ncbigene

position:1109608:-1
position: 1109608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1149688:-1
position: 1149688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1109608-1149688:-1:exon

PPP3CB
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9244
gene: PPP3CB
product: protein phosphatase 3 catalytic subunit beta, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003987727.1
SIO_010081: PPP3CB
so part of: PPP3CB
location: complement(join(1109608..1109732,1113039..1113111,1113737..1113796,1122379..1122476,1123341..1123425,1127704..1127781,1129338..1129463,1130747..1130841,1130937..1131014,1131112..1131251,1136362..1136507,1137330..1137441,1138805..1138929,1140598..1140798,1149205..1149511))
location: region:1109608-1149511:-1
so has part: feature:1149205-1149511:-1:exon
so has part: feature:1140598-1140798:-1:exon
so has part: feature:1138805-1138929:-1:exon
so has part: feature:1137330-1137441:-1:exon
so has part: feature:1136362-1136507:-1:exon
so has part: feature:1131112-1131251:-1:exon
so has part: feature:1130937-1131014:-1:exon
so has part: feature:1130747-1130841:-1:exon
so has part: feature:1129338-1129463:-1:exon
so has part: feature:1127704-1127781:-1:exon
so has part: feature:1123341-1123425:-1:exon
so has part: feature:1122379-1122476:-1:exon
so has part: feature:1113737-1113796:-1:exon
so has part: feature:1113039-1113111:-1:exon
so has part: feature:1109608-1109732:-1:exon

position:1149511:-1
position: 1149511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1149205-1149511:-1:exon

position:1149205:-1
position: 1149205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1140598-1140798:-1:exon

position:1140598:-1
position: 1140598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1140798:-1
position: 1140798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1138805-1138929:-1:exon

position:1138805:-1
position: 1138805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1138929:-1
position: 1138929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1137330-1137441:-1:exon

position:1137330:-1
position: 1137330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1137441:-1
position: 1137441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1136362-1136507:-1:exon

position:1136362:-1
position: 1136362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1136507:-1
position: 1136507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1131112-1131251:-1:exon

position:1131112:-1
position: 1131112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1131251:-1
position: 1131251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1130937-1131014:-1:exon

position:1130937:-1
position: 1130937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1131014:-1
position: 1131014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1130747-1130841:-1:exon

position:1130747:-1
position: 1130747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1130841:-1
position: 1130841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1129338-1129463:-1:exon

position:1129338:-1
position: 1129338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1129463:-1
position: 1129463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1127704-1127781:-1:exon

position:1127704:-1
position: 1127704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1127781:-1
position: 1127781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1123341-1123425:-1:exon

position:1123341:-1
position: 1123341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1123425:-1
position: 1123425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1122379-1122476:-1:exon

position:1122379:-1
position: 1122379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1122476:-1
position: 1122476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1113737-1113796:-1:exon

position:1113737:-1
position: 1113737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1113796:-1
position: 1113796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1113039-1113111:-1:exon

position:1113039:-1
position: 1113039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1113111:-1
position: 1113111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1109608-1109732:-1:exon

position:1109732:-1
position: 1109732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPP3CB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PPP3CB
product: protein phosphatase 3 catalytic subunit beta, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 14 ESTs, 6 long SRA reads, 6 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030453740.1
SIO_010081: PPP3CB
subclass of: SO_0000673
so part of: PPP3CB
location: complement(join(1114328..1116119,1122379..1122476,1123341..1123425,1127704..1127781,1129338..1129463,1130747..1130841,1130937..1131014,1131112..1131251,1136362..1136507,1137330..1137441,1138805..1138929,1140598..1140798,1149205..1149688))
location: region:1114328-1149688:-1
so has part: feature:1149205-1149688:-1:exon
so has part: feature:1140598-1140798:-1:exon
so has part: feature:1138805-1138929:-1:exon
so has part: feature:1137330-1137441:-1:exon
so has part: feature:1136362-1136507:-1:exon
so has part: feature:1131112-1131251:-1:exon
so has part: feature:1130937-1131014:-1:exon
so has part: feature:1130747-1130841:-1:exon
so has part: feature:1129338-1129463:-1:exon
so has part: feature:1127704-1127781:-1:exon
so has part: feature:1123341-1123425:-1:exon
so has part: feature:1122379-1122476:-1:exon
so has part: feature:1114328-1116119:-1:exon

position:1114328:-1
position: 1114328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1149205-1149688:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1140598-1140798:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1138805-1138929:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1137330-1137441:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1136362-1136507:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1131112-1131251:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130937-1131014:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1130747-1130841:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1129338-1129463:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1127704-1127781:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1123341-1123425:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1122379-1122476:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1114328-1116119:-1:exon

position:1116119:-1
position: 1116119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPP3CB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PPP3CB
product: protein phosphatase 3 catalytic subunit beta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 7 long SRA reads, 16 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030453738.1
SIO_010081: PPP3CB
subclass of: SO_0000673
so part of: PPP3CB
location: complement(join(1114328..1116119,1117779..1117808,1122379..1122476,1123341..1123425,1127704..1127781,1129338..1129463,1130747..1130841,1130937..1131014,1131112..1131251,1136362..1136507,1137330..1137441,1138805..1138929,1140598..1140798,1149205..1149592))
location: region:1114328-1149592:-1
so has part: feature:1149205-1149592:-1:exon
so has part: feature:1140598-1140798:-1:exon
so has part: feature:1138805-1138929:-1:exon
so has part: feature:1137330-1137441:-1:exon
so has part: feature:1136362-1136507:-1:exon
so has part: feature:1131112-1131251:-1:exon
so has part: feature:1130937-1131014:-1:exon
so has part: feature:1130747-1130841:-1:exon
so has part: feature:1129338-1129463:-1:exon
so has part: feature:1127704-1127781:-1:exon
so has part: feature:1123341-1123425:-1:exon
so has part: feature:1122379-1122476:-1:exon
so has part: feature:1117779-1117808:-1:exon
so has part: feature:1114328-1116119:-1:exon

position:1149592:-1
position: 1149592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1149205-1149592:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1140598-1140798:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1138805-1138929:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1137330-1137441:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1136362-1136507:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1131112-1131251:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130937-1131014:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1130747-1130841:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1129338-1129463:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1127704-1127781:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1123341-1123425:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1122379-1122476:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1117779-1117808:-1:exon

position:1117779:-1
position: 1117779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1117808:-1
position: 1117808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1114328-1116119:-1:exon

PPP3CB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PPP3CB
product: protein phosphatase 3 catalytic subunit beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs, 5 long SRA reads, 12 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030453739.1
SIO_010081: PPP3CB
subclass of: SO_0000673
so part of: PPP3CB
location: complement(join(1114328..1116119,1117779..1117808,1122379..1122476,1123341..1123422,1127704..1127781,1129338..1129463,1130747..1130841,1130937..1131014,1131112..1131251,1136362..1136507,1137330..1137441,1138805..1138929,1140598..1140798,1149205..1149578))
location: region:1114328-1149578:-1
so has part: feature:1149205-1149578:-1:exon
so has part: feature:1140598-1140798:-1:exon
so has part: feature:1138805-1138929:-1:exon
so has part: feature:1137330-1137441:-1:exon
so has part: feature:1136362-1136507:-1:exon
so has part: feature:1131112-1131251:-1:exon
so has part: feature:1130937-1131014:-1:exon
so has part: feature:1130747-1130841:-1:exon
so has part: feature:1129338-1129463:-1:exon
so has part: feature:1127704-1127781:-1:exon
so has part: feature:1123341-1123422:-1:exon
so has part: feature:1122379-1122476:-1:exon
so has part: feature:1117779-1117808:-1:exon
so has part: feature:1114328-1116119:-1:exon

position:1149578:-1
position: 1149578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1149205-1149578:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1140598-1140798:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1138805-1138929:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1137330-1137441:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1136362-1136507:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1131112-1131251:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130937-1131014:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1130747-1130841:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1129338-1129463:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1127704-1127781:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1123341-1123422:-1:exon

position:1123422:-1
position: 1123422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1122379-1122476:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1117779-1117808:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1114328-1116119:-1:exon

PPP3CB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PPP3CB
product: protein phosphatase 3 catalytic subunit beta, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030453741.1
SIO_010081: PPP3CB
subclass of: SO_0000673
so part of: PPP3CB
location: complement(join(1114328..1116119,1122379..1122476,1123341..1123422,1127704..1127781,1129338..1129463,1130747..1130841,1130937..1131014,1131112..1131251,1136362..1136507,1137330..1137441,1138805..1138929,1140598..1140798,1149205..1149511))
location: region:1114328-1149511:-1
so has part: feature:1149205-1149511:-1:exon
so has part: feature:1140598-1140798:-1:exon
so has part: feature:1138805-1138929:-1:exon
so has part: feature:1137330-1137441:-1:exon
so has part: feature:1136362-1136507:-1:exon
so has part: feature:1131112-1131251:-1:exon
so has part: feature:1130937-1131014:-1:exon
so has part: feature:1130747-1130841:-1:exon
so has part: feature:1129338-1129463:-1:exon
so has part: feature:1127704-1127781:-1:exon
so has part: feature:1123341-1123422:-1:exon
so has part: feature:1122379-1122476:-1:exon
so has part: feature:1114328-1116119:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1149205-1149511:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1140598-1140798:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1138805-1138929:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1137330-1137441:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1136362-1136507:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1131112-1131251:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130937-1131014:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1130747-1130841:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1129338-1129463:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1127704-1127781:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1123341-1123422:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1122379-1122476:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1114328-1116119:-1:exon

PPP3CB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PPP3CB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2B catalytic subunit beta isoform isoform X4
translation: MSAKEGSKVLLLSTHATSERAVKAVPFPPTHRLTSAEVFDTDGRPRVDILKNHLIKEGRVDEEIALRIINEGAAILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMDAFDCLPLAALLNQQFLCVHGGLSPEINTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNENSQEHFSHNTVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCSPHPYWLPNFMDVFTWSLPFVGEKVTEMLVNVLSICSDDELMTEGEDQFDGTAAARKEIIRNKIRAIGKMARVFSVLREESESVLTLKGLTPTGMLPSGVLAGGRQTLQSAIRGFSPQHKICSFEEAKGLDRINERMPPRKDALQQDGTNTINTTNANGNNGTGNNNAQ
SIO_010081: PPP3CB
subclass of: SO_0000673
so part of: PPP3CB
location: complement(join(1115941..1116119,1122379..1122476,1123341..1123422,1127704..1127781,1129338..1129463,1130747..1130841,1130937..1131014,1131112..1131251,1136362..1136507,1137330..1137441,1138805..1138929,1140598..1140798,1149205..1149274))
location: region:1115941-1149274:-1
so has part: feature:1149205-1149274:-1:exon
so has part: feature:1140598-1140798:-1:exon
so has part: feature:1138805-1138929:-1:exon
so has part: feature:1137330-1137441:-1:exon
so has part: feature:1136362-1136507:-1:exon
so has part: feature:1131112-1131251:-1:exon
so has part: feature:1130937-1131014:-1:exon
so has part: feature:1130747-1130841:-1:exon
so has part: feature:1129338-1129463:-1:exon
so has part: feature:1127704-1127781:-1:exon
so has part: feature:1123341-1123422:-1:exon
so has part: feature:1122379-1122476:-1:exon
so has part: feature:1115941-1116119:-1:exon

XP_030309601.1
type: Protein
SIO_000068: ncbiprotein

position:1115941:-1
position: 1115941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1149274:-1
position: 1149274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1149205-1149274:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1140598-1140798:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1138805-1138929:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1137330-1137441:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1136362-1136507:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1131112-1131251:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130937-1131014:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1130747-1130841:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1129338-1129463:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1127704-1127781:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1123341-1123422:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1122379-1122476:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1115941-1116119:-1:exon

PPP3CB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PPP3CB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2B catalytic subunit beta isoform isoform X2
translation: MSAKEGSKVLLLSTHATSERAVKAVPFPPTHRLTSAEVFDTDGRPRVDILKNHLIKEGRVDEEIALRIINEGAAILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMDAFDCLPLAALLNQQFLCVHGGLSPEINTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNENSQEHFSHNTVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCSPHPYWLPNFMDVFTWSLPFVGEKVTEMLVNVLSICSDDELMTEGEDQFDGTAAARKEIIRNKIRAIGKMARVFSVLREESESVLTLKGLTPTGMLPSGVLAGGRQTLQSATVEAIEAEKAIRGFSPQHKICSFEEAKGLDRINERMPPRKDALQQDGTNTINTTNANGNNGTGNNNAQ
SIO_010081: PPP3CB
subclass of: SO_0000673
so part of: PPP3CB
location: complement(join(1115941..1116119,1117779..1117808,1122379..1122476,1123341..1123422,1127704..1127781,1129338..1129463,1130747..1130841,1130937..1131014,1131112..1131251,1136362..1136507,1137330..1137441,1138805..1138929,1140598..1140798,1149205..1149274))
location: region:1115941-1149274:-1
so has part: feature:1149205-1149274:-1:exon
so has part: feature:1140598-1140798:-1:exon
so has part: feature:1138805-1138929:-1:exon
so has part: feature:1137330-1137441:-1:exon
so has part: feature:1136362-1136507:-1:exon
so has part: feature:1131112-1131251:-1:exon
so has part: feature:1130937-1131014:-1:exon
so has part: feature:1130747-1130841:-1:exon
so has part: feature:1129338-1129463:-1:exon
so has part: feature:1127704-1127781:-1:exon
so has part: feature:1123341-1123422:-1:exon
so has part: feature:1122379-1122476:-1:exon
so has part: feature:1117779-1117808:-1:exon
so has part: feature:1115941-1116119:-1:exon

XP_030309599.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1149205-1149274:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1140598-1140798:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1138805-1138929:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1137330-1137441:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1136362-1136507:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1131112-1131251:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130937-1131014:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1130747-1130841:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1129338-1129463:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1127704-1127781:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1123341-1123422:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1122379-1122476:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1117779-1117808:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1115941-1116119:-1:exon

PPP3CB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PPP3CB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2B catalytic subunit beta isoform isoform X3
translation: MSAKEGSKVLLLSTHATSERAVKAVPFPPTHRLTSAEVFDTDGRPRVDILKNHLIKEGRVDEEIALRIINEGAAILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMDAFDCLPLAALLNQQFLCVHGGLSPEINTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNENSQEHFSHNTVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCSPHPYWLPNFMDVFTWSLPFVGEKVTEMLVNVLSICSDDELMTEGEDQFDVGTAAARKEIIRNKIRAIGKMARVFSVLREESESVLTLKGLTPTGMLPSGVLAGGRQTLQSAIRGFSPQHKICSFEEAKGLDRINERMPPRKDALQQDGTNTINTTNANGNNGTGNNNAQ
SIO_010081: PPP3CB
subclass of: SO_0000673
so part of: PPP3CB
location: complement(join(1115941..1116119,1122379..1122476,1123341..1123425,1127704..1127781,1129338..1129463,1130747..1130841,1130937..1131014,1131112..1131251,1136362..1136507,1137330..1137441,1138805..1138929,1140598..1140798,1149205..1149274))
location: region:1115941-1149274:-1
so has part: feature:1149205-1149274:-1:exon
so has part: feature:1140598-1140798:-1:exon
so has part: feature:1138805-1138929:-1:exon
so has part: feature:1137330-1137441:-1:exon
so has part: feature:1136362-1136507:-1:exon
so has part: feature:1131112-1131251:-1:exon
so has part: feature:1130937-1131014:-1:exon
so has part: feature:1130747-1130841:-1:exon
so has part: feature:1129338-1129463:-1:exon
so has part: feature:1127704-1127781:-1:exon
so has part: feature:1123341-1123425:-1:exon
so has part: feature:1122379-1122476:-1:exon
so has part: feature:1115941-1116119:-1:exon

XP_030309600.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1149205-1149274:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1140598-1140798:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1138805-1138929:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1137330-1137441:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1136362-1136507:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1131112-1131251:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130937-1131014:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1130747-1130841:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1129338-1129463:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1127704-1127781:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1123341-1123425:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1122379-1122476:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1115941-1116119:-1:exon

PPP3CB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PPP3CB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2B catalytic subunit beta isoform isoform X1
translation: MSAKEGSKVLLLSTHATSERAVKAVPFPPTHRLTSAEVFDTDGRPRVDILKNHLIKEGRVDEEIALRIINEGAAILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMDAFDCLPLAALLNQQFLCVHGGLSPEINTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNENSQEHFSHNTVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCSPHPYWLPNFMDVFTWSLPFVGEKVTEMLVNVLSICSDDELMTEGEDQFDVGTAAARKEIIRNKIRAIGKMARVFSVLREESESVLTLKGLTPTGMLPSGVLAGGRQTLQSATVEAIEAEKAIRGFSPQHKICSFEEAKGLDRINERMPPRKDALQQDGTNTINTTNANGNNGTGNNNAQ
SIO_010081: PPP3CB
subclass of: SO_0000673
so part of: PPP3CB
location: complement(join(1115941..1116119,1117779..1117808,1122379..1122476,1123341..1123425,1127704..1127781,1129338..1129463,1130747..1130841,1130937..1131014,1131112..1131251,1136362..1136507,1137330..1137441,1138805..1138929,1140598..1140798,1149205..1149274))
location: region:1115941-1149274:-1
so has part: feature:1149205-1149274:-1:exon
so has part: feature:1140598-1140798:-1:exon
so has part: feature:1138805-1138929:-1:exon
so has part: feature:1137330-1137441:-1:exon
so has part: feature:1136362-1136507:-1:exon
so has part: feature:1131112-1131251:-1:exon
so has part: feature:1130937-1131014:-1:exon
so has part: feature:1130747-1130841:-1:exon
so has part: feature:1129338-1129463:-1:exon
so has part: feature:1127704-1127781:-1:exon
so has part: feature:1123341-1123425:-1:exon
so has part: feature:1122379-1122476:-1:exon
so has part: feature:1117779-1117808:-1:exon
so has part: feature:1115941-1116119:-1:exon

XP_030309598.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1149205-1149274:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1140598-1140798:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1138805-1138929:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1137330-1137441:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1136362-1136507:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1131112-1131251:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1130937-1131014:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1130747-1130841:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1129338-1129463:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1127704-1127781:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1123341-1123425:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1122379-1122476:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1117779-1117808:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1115941-1116119:-1:exon

USP54
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: USP54
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1154485..1241506)
location: region:1154485-1241506:-1
so has part: feature:1154485-1241506:-1:exon
subclass of: SO_0000010

103537685
type: Gene
SIO_000068: ncbigene

position:1154485:-1
position: 1154485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1241506:-1
position: 1241506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1154485-1241506:-1:exon

USP54
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: USP54
product: ubiquitin specific peptidase 54, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 2 long SRA reads, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030453137.1
SIO_010081: USP54
subclass of: SO_0000673
so part of: USP54
location: complement(join(1154485..1156636,1161236..1162680,1164938..1165130,1166286..1166405,1169214..1169387,1170454..1170590,1171290..1171524,1172555..1172935,1173225..1173356,1177104..1177274,1179340..1179508,1180809..1180958,1182166..1182312,1184495..1184600,1185380..1185462,1185618..1185731,1187165..1187299,1195737..1195829,1197826..1198672,1220486..1220554))
location: region:1154485-1220554:-1
so has part: feature:1220486-1220554:-1:exon
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so has part: feature:1184495-1184600:-1:exon
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so has part: feature:1180809-1180958:-1:exon
so has part: feature:1179340-1179508:-1:exon
so has part: feature:1177104-1177274:-1:exon
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so has part: feature:1169214-1169387:-1:exon
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so has part: feature:1164938-1165130:-1:exon
so has part: feature:1161236-1162680:-1:exon
so has part: feature:1154485-1156636:-1:exon

position:1220554:-1
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reference: sequence
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urn:…
SIO_000300: 1
SIO_000628: feature:1220486-1220554:-1:exon

position:1220486:-1
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urn:…
SIO_000300: 2
SIO_000628: feature:1197826-1198672:-1:exon

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urn:…
SIO_000300: 3
SIO_000628: feature:1195737-1195829:-1:exon

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urn:…
SIO_000300: 4
SIO_000628: feature:1187165-1187299:-1:exon

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urn:…
SIO_000300: 5
SIO_000628: feature:1185618-1185731:-1:exon

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urn:…
SIO_000300: 6
SIO_000628: feature:1185380-1185462:-1:exon

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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
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urn:…
SIO_000300: 9
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urn:…
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SIO_000628: feature:1179340-1179508:-1:exon

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urn:…
SIO_000300: 11
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urn:…
SIO_000300: 12
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urn:…
SIO_000300: 13
SIO_000628: feature:1172555-1172935:-1:exon

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reference: sequence
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urn:…
SIO_000300: 14
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urn:…
SIO_000300: 15
SIO_000628: feature:1170454-1170590:-1:exon

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urn:…
SIO_000300: 16
SIO_000628: feature:1169214-1169387:-1:exon

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urn:…
SIO_000300: 17
SIO_000628: feature:1166286-1166405:-1:exon

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reference: sequence
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urn:…
SIO_000300: 18
SIO_000628: feature:1164938-1165130:-1:exon

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reference: sequence
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urn:…
SIO_000300: 19
SIO_000628: feature:1161236-1162680:-1:exon

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reference: sequence
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urn:…
SIO_000300: 20
SIO_000628: feature:1154485-1156636:-1:exon

position:1156636:-1
position: 1156636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

USP54
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: USP54
product: ubiquitin specific peptidase 54, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs, 3 long SRA reads, 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030453133.1
SIO_010081: USP54
subclass of: SO_0000673
so part of: USP54
location: complement(join(1154485..1156636,1157364..1157550,1158424..1158564,1159015..1159133,1161236..1162680,1164938..1165130,1166286..1166405,1169214..1169387,1170454..1170590,1171290..1171524,1172555..1172935,1173225..1173356,1177104..1177274,1179340..1179508,1180809..1180958,1182166..1182312,1184495..1184600,1185380..1185462,1185618..1185731,1187165..1187299,1195737..1195829,1197826..1198672,1220486..1220554))
location: region:1154485-1220554:-1
so has part: feature:1220486-1220554:-1:exon
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so has part: feature:1185618-1185731:-1:exon
so has part: feature:1185380-1185462:-1:exon
so has part: feature:1184495-1184600:-1:exon
so has part: feature:1182166-1182312:-1:exon
so has part: feature:1180809-1180958:-1:exon
so has part: feature:1179340-1179508:-1:exon
so has part: feature:1177104-1177274:-1:exon
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so has part: feature:1172555-1172935:-1:exon
so has part: feature:1171290-1171524:-1:exon
so has part: feature:1170454-1170590:-1:exon
so has part: feature:1169214-1169387:-1:exon
so has part: feature:1166286-1166405:-1:exon
so has part: feature:1164938-1165130:-1:exon
so has part: feature:1161236-1162680:-1:exon
so has part: feature:1159015-1159133:-1:exon
so has part: feature:1158424-1158564:-1:exon
so has part: feature:1157364-1157550:-1:exon
so has part: feature:1154485-1156636:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1220486-1220554:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1197826-1198672:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1195737-1195829:-1:exon

urn:…
SIO_000300: 4
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SIO_000300: 5
SIO_000628: feature:1185618-1185731:-1:exon

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SIO_000300: 6
SIO_000628: feature:1185380-1185462:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1184495-1184600:-1:exon

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SIO_000300: 8
SIO_000628: feature:1182166-1182312:-1:exon

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SIO_000300: 9
SIO_000628: feature:1180809-1180958:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1179340-1179508:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1177104-1177274:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1173225-1173356:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1172555-1172935:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1171290-1171524:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1170454-1170590:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1169214-1169387:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1166286-1166405:-1:exon

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SIO_000300: 18
SIO_000628: feature:1164938-1165130:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1161236-1162680:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1159015-1159133:-1:exon

position:1159015:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1159133:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 21
SIO_000628: feature:1158424-1158564:-1:exon

position:1158424:-1
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reference: sequence
type: ReverseStrandPosition
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reference: sequence
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urn:…
SIO_000300: 22
SIO_000628: feature:1157364-1157550:-1:exon

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reference: sequence
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position:1157550:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 23
SIO_000628: feature:1154485-1156636:-1:exon

USP54
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: USP54
product: ubiquitin specific peptidase 54, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030453131.1
SIO_010081: USP54
subclass of: SO_0000673
so part of: USP54
location: complement(join(1155178..1156636,1157364..1157550,1158424..1158564,1159015..1159133,1161236..1162680,1164938..1165130,1166286..1166405,1169214..1169387,1170454..1170590,1171290..1171524,1172555..1172935,1173225..1173356,1177104..1177274,1179340..1179508,1180809..1180958,1182166..1182312,1184495..1184600,1185380..1185462,1185618..1185731,1187165..1187299,1195737..1195829,1197826..1198672,1241455..1241506))
location: region:1155178-1241506:-1
so has part: feature:1241455-1241506:-1:exon
so has part: feature:1197826-1198672:-1:exon
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so has part: feature:1187165-1187299:-1:exon
so has part: feature:1185618-1185731:-1:exon
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so has part: feature:1182166-1182312:-1:exon
so has part: feature:1180809-1180958:-1:exon
so has part: feature:1179340-1179508:-1:exon
so has part: feature:1177104-1177274:-1:exon
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so has part: feature:1169214-1169387:-1:exon
so has part: feature:1166286-1166405:-1:exon
so has part: feature:1164938-1165130:-1:exon
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so has part: feature:1157364-1157550:-1:exon
so has part: feature:1155178-1156636:-1:exon

position:1155178:-1
position: 1155178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1241455-1241506:-1:exon

position:1241455:-1
position: 1241455
reference: sequence
type: ReverseStrandPosition
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urn:…
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SIO_000628: feature:1197826-1198672:-1:exon

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SIO_000628: feature:1195737-1195829:-1:exon

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SIO_000628: feature:1177104-1177274:-1:exon

urn:…
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urn:…
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SIO_000628: feature:1171290-1171524:-1:exon

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SIO_000300: 15
SIO_000628: feature:1170454-1170590:-1:exon

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urn:…
SIO_000300: 18
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urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
SIO_000628: feature:1158424-1158564:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1157364-1157550:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1155178-1156636:-1:exon

USP54
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: USP54
product: ubiquitin specific peptidase 54, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030453134.1
SIO_010081: USP54
subclass of: SO_0000673
so part of: USP54
location: complement(join(1155178..1156636,1157364..1157550,1158424..1158564,1159015..1159133,1161236..1162680,1164938..1165130,1166286..1166405,1169214..1169387,1170454..1170590,1171290..1171524,1172555..1172935,1173225..1173356,1177104..1177274,1179340..1179508,1180809..1180958,1182166..1182312,1184495..1184600,1185380..1185462,1185618..1185731,1187165..1187299,1197826..1198672,1220486..1220554))
location: region:1155178-1220554:-1
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urn:…
SIO_000300: 1
SIO_000628: feature:1220486-1220554:-1:exon

urn:…
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SIO_000628: feature:1197826-1198672:-1:exon

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urn:…
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urn:…
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SIO_000628: feature:1158424-1158564:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1157364-1157550:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1155178-1156636:-1:exon

USP54
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: USP54
product: ubiquitin specific peptidase 54, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030453135.1
SIO_010081: USP54
subclass of: SO_0000673
so part of: USP54
location: complement(join(1155178..1156636,1157364..1157550,1158424..1158564,1159015..1159133,1161236..1162680,1164938..1165130,1169214..1169387,1170454..1170590,1171290..1171524,1172555..1172935,1173225..1173356,1177104..1177274,1179340..1179508,1180809..1180958,1182166..1182312,1184495..1184600,1185380..1185462,1185618..1185731,1187165..1187299,1195737..1195829,1197826..1198672,1220486..1220554))
location: region:1155178-1220554:-1
so has part: feature:1220486-1220554:-1:exon
so has part: feature:1197826-1198672:-1:exon
so has part: feature:1195737-1195829:-1:exon
so has part: feature:1187165-1187299:-1:exon
so has part: feature:1185618-1185731:-1:exon
so has part: feature:1185380-1185462:-1:exon
so has part: feature:1184495-1184600:-1:exon
so has part: feature:1182166-1182312:-1:exon
so has part: feature:1180809-1180958:-1:exon
so has part: feature:1179340-1179508:-1:exon
so has part: feature:1177104-1177274:-1:exon
so has part: feature:1173225-1173356:-1:exon
so has part: feature:1172555-1172935:-1:exon
so has part: feature:1171290-1171524:-1:exon
so has part: feature:1170454-1170590:-1:exon
so has part: feature:1169214-1169387:-1:exon
so has part: feature:1164938-1165130:-1:exon
so has part: feature:1161236-1162680:-1:exon
so has part: feature:1159015-1159133:-1:exon
so has part: feature:1158424-1158564:-1:exon
so has part: feature:1157364-1157550:-1:exon
so has part: feature:1155178-1156636:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1220486-1220554:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1197826-1198672:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1195737-1195829:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1187165-1187299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1185618-1185731:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1185380-1185462:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1184495-1184600:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1182166-1182312:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1180809-1180958:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1179340-1179508:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1177104-1177274:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1173225-1173356:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1172555-1172935:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1171290-1171524:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1170454-1170590:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1169214-1169387:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1164938-1165130:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1161236-1162680:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1159015-1159133:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1158424-1158564:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1157364-1157550:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1155178-1156636:-1:exon

USP54
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: USP54
product: ubiquitin specific peptidase 54, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030453136.1
SIO_010081: USP54
subclass of: SO_0000673
so part of: USP54
location: complement(join(1155178..1156636,1157364..1157550,1159015..1159133,1161236..1162680,1164938..1165130,1166286..1166405,1169214..1169387,1170454..1170590,1171290..1171524,1172555..1172935,1173225..1173356,1177104..1177274,1179340..1179508,1180809..1180958,1182166..1182312,1184495..1184600,1185380..1185462,1185618..1185731,1187165..1187299,1195737..1195829,1197826..1198672,1220486..1220554))
location: region:1155178-1220554:-1
so has part: feature:1220486-1220554:-1:exon
so has part: feature:1197826-1198672:-1:exon
so has part: feature:1195737-1195829:-1:exon
so has part: feature:1187165-1187299:-1:exon
so has part: feature:1185618-1185731:-1:exon
so has part: feature:1185380-1185462:-1:exon
so has part: feature:1184495-1184600:-1:exon
so has part: feature:1182166-1182312:-1:exon
so has part: feature:1180809-1180958:-1:exon
so has part: feature:1179340-1179508:-1:exon
so has part: feature:1177104-1177274:-1:exon
so has part: feature:1173225-1173356:-1:exon
so has part: feature:1172555-1172935:-1:exon
so has part: feature:1171290-1171524:-1:exon
so has part: feature:1170454-1170590:-1:exon
so has part: feature:1169214-1169387:-1:exon
so has part: feature:1166286-1166405:-1:exon
so has part: feature:1164938-1165130:-1:exon
so has part: feature:1161236-1162680:-1:exon
so has part: feature:1159015-1159133:-1:exon
so has part: feature:1157364-1157550:-1:exon
so has part: feature:1155178-1156636:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1220486-1220554:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1197826-1198672:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1195737-1195829:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1187165-1187299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1185618-1185731:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1185380-1185462:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1184495-1184600:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1182166-1182312:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1180809-1180958:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1179340-1179508:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1177104-1177274:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1173225-1173356:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1172555-1172935:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1171290-1171524:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1170454-1170590:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1169214-1169387:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1166286-1166405:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1164938-1165130:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1161236-1162680:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1159015-1159133:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1157364-1157550:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1155178-1156636:-1:exon

USP54
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: USP54
product: ubiquitin specific peptidase 54, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030453132.1
SIO_010081: USP54
subclass of: SO_0000673
so part of: USP54
location: complement(join(1155178..1156636,1157364..1157550,1158424..1158564,1159015..1159133,1161236..1162680,1164938..1165130,1166286..1166405,1169214..1169387,1170454..1170590,1171290..1171524,1172555..1172935,1173225..1173356,1177104..1177274,1179340..1179508,1180809..1180958,1182166..1182312,1184495..1184600,1185380..1185462,1185618..1185731,1187165..1187299,1195737..1195829,1197826..1198672,1200442..1200493))
location: region:1155178-1200493:-1
so has part: feature:1200442-1200493:-1:exon
so has part: feature:1197826-1198672:-1:exon
so has part: feature:1195737-1195829:-1:exon
so has part: feature:1187165-1187299:-1:exon
so has part: feature:1185618-1185731:-1:exon
so has part: feature:1185380-1185462:-1:exon
so has part: feature:1184495-1184600:-1:exon
so has part: feature:1182166-1182312:-1:exon
so has part: feature:1180809-1180958:-1:exon
so has part: feature:1179340-1179508:-1:exon
so has part: feature:1177104-1177274:-1:exon
so has part: feature:1173225-1173356:-1:exon
so has part: feature:1172555-1172935:-1:exon
so has part: feature:1171290-1171524:-1:exon
so has part: feature:1170454-1170590:-1:exon
so has part: feature:1169214-1169387:-1:exon
so has part: feature:1166286-1166405:-1:exon
so has part: feature:1164938-1165130:-1:exon
so has part: feature:1161236-1162680:-1:exon
so has part: feature:1159015-1159133:-1:exon
so has part: feature:1158424-1158564:-1:exon
so has part: feature:1157364-1157550:-1:exon
so has part: feature:1155178-1156636:-1:exon

position:1200493:-1
position: 1200493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1200442-1200493:-1:exon

position:1200442:-1
position: 1200442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1197826-1198672:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1195737-1195829:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1187165-1187299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1185618-1185731:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1185380-1185462:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1184495-1184600:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1182166-1182312:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1180809-1180958:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1179340-1179508:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1177104-1177274:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1173225-1173356:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1172555-1172935:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1171290-1171524:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1170454-1170590:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1169214-1169387:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1166286-1166405:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1164938-1165130:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1161236-1162680:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1159015-1159133:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1158424-1158564:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1157364-1157550:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1155178-1156636:-1:exon

USP54
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: USP54
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X2
translation: MSWKRNYFSVGRGNVQGMFTPRNTTSIAPSKGLSNEPGQNSCFLNSALQSIFNQFQCSSEKVLPSDALRTALAKTFQDEQRFQLGIMDDAAECFENLLMRIHFHIADETKEDICTAPHCVSHQKFAMTLFEQCVCTSCGATSDPLPFIQMVHYISTTSLCNQAICMLERREKPTPDMFGELLQNASTMGDLRNCPSNCGEKIRIRRVLMNSPQIITIGLVWDSDHSDLAEDVIHSLGTCLKLGDLFFRVTDDRAKHSELYLVGMICYYGKHYSTFFFQTKIRKWMYFDDAHVKEIGPKWKDVVTKCIKGHYQPLLLLYADPRGTPVSTQDLPPQVDLQQYSRTCYDSEDSGREPSISSDTRTDSSTDSYPYKQAHHESVVSHFSSDSQGTVIYNVENDAASQSSRDTGHLTDSECNQKHLSKKGSLAERKRSSSRSRRKGEEAQSSGYHSEGETLKEKQAPRTAPKPSSSTSRLREFKETVSNMIHSRPQQISQTIQTSPRGGSSVDQAETRPSKSLPAHSRDWEVESTSSESKSSSSSRYRPTWRPKRESLNIDSIFSKDKRKHYGYTQLSPFSEEAGKELIENEGKEHGVQEPRSSQSNVRSKRGVLGRGSQAPVVDQHPHLIQRMESGYESSERNSNSPVSLDMPLSESSSTHRDAHMKRGGGLVPAWRNIPKSHSSSILEVESSSLGSWATSPHTIGNGGEMFAPLKSELDELQEEVARRAHEQELRRKREKEMEAAMGFNPRPSRFMDLDELQNQGRSDGFEKSMQEADSIFEESLNQEQKGDCAAALALCNEAISKLRLAMHDASASTHSRAIVDKKLQISIRKARSLQDRMQHQQPAQPLPPPTSHPPQGGTMAQPTSEQTGPLQVLLSQEVPLEPNKEVEFGSSSFFHPPASCHELHSSLYPESSSLPPSESNPSNRISPNFQSASADFHDQVPSFPYRQGLAERSTRTEDDAHRGVEFAGTTASGPRDCRECCSSSKLEEVPNITPVLTPQYKPKANTVNSGSLPTLFPCPHPPQAASPEKDNQHSPCSKLASSPARPSTDHSGACRASSSPTQQCSWDPLQKTNKYSRASSQEVLLPSQDEYGTAEGCKAEAFSTKGHVRSLAEQFQKMHAVSQRKGSHEKGWIAAVCQEEKSPKLSQKSFINSSSSGCRQLIHQNQENQSQPSETLHSTVDLRDGVVSLEGFSAQHVSSKSVCSHSEELCRRGGQNVADPAPYLERHCHDGGMKQVDDGAASSVVASMPVDCWVDNVTRYYSSQKAKKNAEWLPVPGRSPPLSEQRAVGDDLSRIPVHLHPQWNQDPEQELSELESLYQTSLQASQATRPFLGRQDSARYPFDQSVSAKLTSRKLHATAGMGLSKTPTAELERSLCGSTASSVSKVTYTREHSREPEEEEMYSAENFRRIARSLSGTVISNREETLVSSHSFEAPNPRKMSVDSSHRSSSSTSLPFPHDPPVFPLDPQHNPNLVQHLPHDVLMPSMVGKARKQSGDQKNNLQKLLVVPDRGEALQGEDYPGVALNSGSLPCAPKGSLSPGQKPLVNPHLGGGTPSVSGHLLPTSCPAWQAAPFPDKGAAFRGKQAGQPGRSSQGGFLQQPSQHPTRGSHPGGCRLPAPTDYSTLRTPHQPSWDPRASPGCPVPPSCVKAPGPRRVDMPPEDDWRQNSYTPQPGRRRVLPTRGMDGTFSSASEAHRNMLARAAAAATGTMQKNGW
SIO_010081: USP54
subclass of: SO_0000673
so part of: USP54
location: complement(join(1155975..1156636,1157364..1157550,1158424..1158564,1159015..1159133,1161236..1162680,1164938..1165130,1166286..1166405,1169214..1169387,1170454..1170590,1171290..1171524,1172555..1172935,1173225..1173356,1177104..1177274,1179340..1179508,1180809..1180958,1182166..1182312,1184495..1184600,1185380..1185462,1185618..1185731,1187165..1187299,1197826..1197972))
location: region:1155975-1197972:-1
so has part: feature:1197826-1197972:-1:exon
so has part: feature:1187165-1187299:-1:exon
so has part: feature:1185618-1185731:-1:exon
so has part: feature:1185380-1185462:-1:exon
so has part: feature:1184495-1184600:-1:exon
so has part: feature:1182166-1182312:-1:exon
so has part: feature:1180809-1180958:-1:exon
so has part: feature:1179340-1179508:-1:exon
so has part: feature:1177104-1177274:-1:exon
so has part: feature:1173225-1173356:-1:exon
so has part: feature:1172555-1172935:-1:exon
so has part: feature:1171290-1171524:-1:exon
so has part: feature:1170454-1170590:-1:exon
so has part: feature:1169214-1169387:-1:exon
so has part: feature:1166286-1166405:-1:exon
so has part: feature:1164938-1165130:-1:exon
so has part: feature:1161236-1162680:-1:exon
so has part: feature:1159015-1159133:-1:exon
so has part: feature:1158424-1158564:-1:exon
so has part: feature:1157364-1157550:-1:exon
so has part: feature:1155975-1156636:-1:exon

XP_030308994.1
type: Protein
SIO_000068: ncbiprotein

position:1155975:-1
position: 1155975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1197972:-1
position: 1197972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1197826-1197972:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1187165-1187299:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1185618-1185731:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1185380-1185462:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1184495-1184600:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1182166-1182312:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1180809-1180958:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1179340-1179508:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1177104-1177274:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1173225-1173356:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1172555-1172935:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1171290-1171524:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1170454-1170590:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1169214-1169387:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1166286-1166405:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1164938-1165130:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1161236-1162680:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1159015-1159133:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1158424-1158564:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1157364-1157550:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1155975-1156636:-1:exon

USP54
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: USP54
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X3
translation: MSWKRNYFSVGRGNVQGMFTPRNTTSIAPSKGLSNEPGQNSCFLNSALQVLWHLDIFRRSFRQITTHKCMGDSCIFCALKSIFNQFQCSSEKVLPSDALRTALAKTFQDEQRFQLGIMDDAAECFENLLMRIHFHIADETKEDICTAPHCVSHQKFAMTLFEQCVCTSCGATSDPLPFIQMVHYISTTSLCNQAICMLERREKPTPDMFGELLQNASTMGDLRNCPSNCGEKIRIRRVLMNSPQIITIGLVWDSDHSDLAEDVIHSLGTCLKLGDLFFRVTDDRAKHSELYLVGMICYYGKHYSTFFFQTKIRKWMYFDDAHVKEIGPKWKDVVTKCIKGHYQPLLLLYADPRGTPVSTQDLPPQVDLQQYSRTCYDSEDSGREPSISSDTRTDSSTDSYPYKQAHHESVVSHFSSDSQGTVIYNVENDAASQSSRDTGHLTDSECNQKHLSKKGSLAERKRSSSRSRRKGEEAQSSGYHSEGETLKEKQAPRTAPKPSSSTSRLREFKETVSNMIHSRPQQISQTIQTSPRGGSSVDQAETRPSKSLPAHSRDWEVESTSSESKSSSSSRYRPTWRPKRESLNIDSIFSKDKRKHYGYTQLSPFSEEAGKELIENEGKEHGVQEPRSSQSNVRSKRGVLGRGSQAPVVDQHPHLIQRMESGYESSERNSNSPVSLDMPLSESSSTHRDAHMKRGGGLVPAWRNIPKSHSSSILEVESSSLGSWATSPHTIGNGGEMFAPLKSELDELQEEVARRAHEQELRRKREKEMEAAMGFNPRPSRFMDLDELQNQAKLRLAMHDASASTHSRAIVDKKLQISIRKARSLQDRMQHQQPAQPLPPPTSHPPQGGTMAQPTSEQTGPLQVLLSQEVPLEPNKEVEFGSSSFFHPPASCHELHSSLYPESSSLPPSESNPSNRISPNFQSASADFHDQVPSFPYRQGLAERSTRTEDDAHRGVEFAGTTASGPRDCRECCSSSKLEEVPNITPVLTPQYKPKANTVNSGSLPTLFPCPHPPQAASPEKDNQHSPCSKLASSPARPSTDHSGACRASSSPTQQCSWDPLQKTNKYSRASSQEVLLPSQDEYGTAEGCKAEAFSTKGHVRSLAEQFQKMHAVSQRKGSHEKGWIAAVCQEEKSPKLSQKSFINSSSSGCRQLIHQNQENQSQPSETLHSTVDLRDGVVSLEGFSAQHVSSKSVCSHSEELCRRGGQNVADPAPYLERHCHDGGMKQVDDGAASSVVASMPVDCWVDNVTRYYSSQKAKKNAEWLPVPGRSPPLSEQRAVGDDLSRIPVHLHPQWNQDPEQELSELESLYQTSLQASQATRPFLGRQDSARYPFDQSVSAKLTSRKLHATAGMGLSKTPTAELERSLCGSTASSVSKVTYTREHSREPEEEEMYSAENFRRIARSLSGTVISNREETLVSSHSFEAPNPRKMSVDSSHRSSSSTSLPFPHDPPVFPLDPQHNPNLVQHLPHDVLMPSMVGKARKQSGDQKNNLQKLLVVPDRGEALQGEDYPGVALNSGSLPCAPKGSLSPGQKPLVNPHLGGGTPSVSGHLLPTSCPAWQAAPFPDKGAAFRGKQAGQPGRSSQGGFLQQPSQHPTRGSHPGGCRLPAPTDYSTLRTPHQPSWDPRASPGCPVPPSCVKAPGPRRVDMPPEDDWRQNSYTPQPGRRRVLPTRGMDGTFSSASEAHRNMLARAAAAATGTMQKNGW
SIO_010081: USP54
subclass of: SO_0000673
so part of: USP54
location: complement(join(1155975..1156636,1157364..1157550,1158424..1158564,1159015..1159133,1161236..1162680,1164938..1165130,1169214..1169387,1170454..1170590,1171290..1171524,1172555..1172935,1173225..1173356,1177104..1177274,1179340..1179508,1180809..1180958,1182166..1182312,1184495..1184600,1185380..1185462,1185618..1185731,1187165..1187299,1195737..1195829,1197826..1197972))
location: region:1155975-1197972:-1
so has part: feature:1197826-1197972:-1:exon
so has part: feature:1195737-1195829:-1:exon
so has part: feature:1187165-1187299:-1:exon
so has part: feature:1185618-1185731:-1:exon
so has part: feature:1185380-1185462:-1:exon
so has part: feature:1184495-1184600:-1:exon
so has part: feature:1182166-1182312:-1:exon
so has part: feature:1180809-1180958:-1:exon
so has part: feature:1179340-1179508:-1:exon
so has part: feature:1177104-1177274:-1:exon
so has part: feature:1173225-1173356:-1:exon
so has part: feature:1172555-1172935:-1:exon
so has part: feature:1171290-1171524:-1:exon
so has part: feature:1170454-1170590:-1:exon
so has part: feature:1169214-1169387:-1:exon
so has part: feature:1164938-1165130:-1:exon
so has part: feature:1161236-1162680:-1:exon
so has part: feature:1159015-1159133:-1:exon
so has part: feature:1158424-1158564:-1:exon
so has part: feature:1157364-1157550:-1:exon
so has part: feature:1155975-1156636:-1:exon

XP_030308995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1197826-1197972:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1195737-1195829:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1187165-1187299:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1185618-1185731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1185380-1185462:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1184495-1184600:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1182166-1182312:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1180809-1180958:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1179340-1179508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1177104-1177274:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1173225-1173356:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1172555-1172935:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1171290-1171524:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1170454-1170590:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1169214-1169387:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1164938-1165130:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1161236-1162680:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1159015-1159133:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1158424-1158564:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1157364-1157550:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1155975-1156636:-1:exon

USP54
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: USP54
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X5
translation: MSWKRNYFSVGRGNVQGMFTPRNTTSIAPSKGLSNEPGQNSCFLNSALQVLWHLDIFRRSFRQITTHKCMGDSCIFCALKSIFNQFQCSSEKVLPSDALRTALAKTFQDEQRFQLGIMDDAAECFENLLMRIHFHIADETKEDICTAPHCVSHQKFAMTLFEQCVCTSCGATSDPLPFIQMVHYISTTSLCNQAICMLERREKPTPDMFGELLQNASTMGDLRNCPSNCGEKIRIRRVLMNSPQIITIGLVWDSDHSDLAEDVIHSLGTCLKLGDLFFRVTDDRAKHSELYLVGMICYYGKHYSTFFFQTKIRKWMYFDDAHVKEIGPKWKDVVTKCIKGHYQPLLLLYADPRGTPVSTQDLPPQVDLQQYSRTCYDSEDSGREPSISSDTRTDSSTDSYPYKQAHHESVVSHFSSDSQGTVIYNVENDAASQSSRDTGHLTDSECNQKHLSKKGSLAERKRSSSRSRRKGEEAQSSGYHSEGETLKEKQAPRTAPKPSSSTSRLREFKETVSNMIHSRPQQISQTIQTSPRGGSSVDQAETRPSKSLPAHSRDWEVESTSSESKSSSSSRYRPTWRPKRESLNIDSIFSKDKRKHYGYTQLSPFSEEAGKELIENEGKEHGVQEPRSSQSNVRSKRGVLGRGSQAPVVDQHPHLIQRMESGYESSERNSNSPVSLDMPLSESSSTHRDAHMKRGGGLVPAWRNIPKSHSSSILEVESSSLGSWATSPHTIGNGGEMFAPLKSELDELQEEVARRAHEQELRRKREKEMEAAMGFNPRPSRFMDLDELQNQGRSDGFEKSMQEADSIFEESLNQEQKGDCAAALALCNEAISKLRLAMHDASASTHSRAIVDKKLQISIRKARSLQDRMQHQQPAQPLPPPTSHPPQGGTMAQPTSEQTGPLQVLLSQEVPLEPNKEVEFGSSSFFHPPASCHELHSSLYPESSSLPPSESNPSNRISPNFQSASADFHDQVPSFPYRQGLAERSTRTEDDAHRGVEFAGTTASGPRDCRECCSSSKLEEVPNITPVLTPQYKPKANTVNSGSLPTLFPCPHPPQAASPEKDNQHSPCSKLASSPARPSTDHSGACRASSSPTQQCSWDPLQKTNKYSRASSQEVLLPSQDEYGTAEGCKAEAFSTKGHVRSLAEQFQKMHAVSQRKGSHEKGWIAAVCQEEKSPKLSQKSFINSSSSGCRQLIHQNQENQSQPSETLHSTVDLRDGVVSLEGFSAQHVSSKSVCSHSEELCRRGGQNVADPAPYLERHCHDGGMKQVDDGAASSVVASMPVDCWVDNVTRYYSSQKAKKNAEWLPVPGRSPPLSEQRAVGDDLSRIPVHLHPQWNQDPEQELSELESLYQTSLQASQATRPFLGRQDSARYPFDQSGDQKNNLQKLLVVPDRGEALQGEDYPGVALNSGSLPCAPKGSLSPGQKPLVNPHLGGGTPSVSGHLLPTSCPAWQAAPFPDKGAAFRGKQAGQPGRSSQGGFLQQPSQHPTRGSHPGGCRLPAPTDYSTLRTPHQPSWDPRASPGCPVPPSCVKAPGPRRVDMPPEDDWRQNSYTPQPGRRRVLPTRGMDGTFSSASEAHRNMLARAAAAATGTMQKNGW
SIO_010081: USP54
subclass of: SO_0000673
so part of: USP54
location: complement(join(1155975..1156636,1161236..1162680,1164938..1165130,1166286..1166405,1169214..1169387,1170454..1170590,1171290..1171524,1172555..1172935,1173225..1173356,1177104..1177274,1179340..1179508,1180809..1180958,1182166..1182312,1184495..1184600,1185380..1185462,1185618..1185731,1187165..1187299,1195737..1195829,1197826..1197972))
location: region:1155975-1197972:-1
so has part: feature:1197826-1197972:-1:exon
so has part: feature:1195737-1195829:-1:exon
so has part: feature:1187165-1187299:-1:exon
so has part: feature:1185618-1185731:-1:exon
so has part: feature:1185380-1185462:-1:exon
so has part: feature:1184495-1184600:-1:exon
so has part: feature:1182166-1182312:-1:exon
so has part: feature:1180809-1180958:-1:exon
so has part: feature:1179340-1179508:-1:exon
so has part: feature:1177104-1177274:-1:exon
so has part: feature:1173225-1173356:-1:exon
so has part: feature:1172555-1172935:-1:exon
so has part: feature:1171290-1171524:-1:exon
so has part: feature:1170454-1170590:-1:exon
so has part: feature:1169214-1169387:-1:exon
so has part: feature:1166286-1166405:-1:exon
so has part: feature:1164938-1165130:-1:exon
so has part: feature:1161236-1162680:-1:exon
so has part: feature:1155975-1156636:-1:exon

XP_030308997.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1197826-1197972:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1195737-1195829:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1187165-1187299:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1185618-1185731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1185380-1185462:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1184495-1184600:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1182166-1182312:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1180809-1180958:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1179340-1179508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1177104-1177274:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1173225-1173356:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1172555-1172935:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1171290-1171524:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1170454-1170590:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1169214-1169387:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1166286-1166405:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1164938-1165130:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1161236-1162680:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1155975-1156636:-1:exon

USP54
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: USP54
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X4
translation: MSWKRNYFSVGRGNVQGMFTPRNTTSIAPSKGLSNEPGQNSCFLNSALQVLWHLDIFRRSFRQITTHKCMGDSCIFCALKSIFNQFQCSSEKVLPSDALRTALAKTFQDEQRFQLGIMDDAAECFENLLMRIHFHIADETKEDICTAPHCVSHQKFAMTLFEQCVCTSCGATSDPLPFIQMVHYISTTSLCNQAICMLERREKPTPDMFGELLQNASTMGDLRNCPSNCGEKIRIRRVLMNSPQIITIGLVWDSDHSDLAEDVIHSLGTCLKLGDLFFRVTDDRAKHSELYLVGMICYYGKHYSTFFFQTKIRKWMYFDDAHVKEIGPKWKDVVTKCIKGHYQPLLLLYADPRGTPVSTQDLPPQVDLQQYSRTCYDSEDSGREPSISSDTRTDSSTDSYPYKQAHHESVVSHFSSDSQGTVIYNVENDAASQSSRDTGHLTDSECNQKHLSKKGSLAERKRSSSRSRRKGEEAQSSGYHSEGETLKEKQAPRTAPKPSSSTSRLREFKETVSNMIHSRPQQISQTIQTSPRGGSSVDQAETRPSKSLPAHSRDWEVESTSSESKSSSSSRYRPTWRPKRESLNIDSIFSKDKRKHYGYTQLSPFSEEAGKELIENEGKEHGVQEPRSSQSNVRSKRGVLGRGSQAPVVDQHPHLIQRMESGYESSERNSNSPVSLDMPLSESSSTHRDAHMKRGGGLVPAWRNIPKSHSSSILEVESSSLGSWATSPHTIGNGGEMFAPLKSELDELQEEVARRAHEQELRRKREKEMEAAMGFNPRPSRFMDLDELQNQGRSDGFEKSMQEADSIFEESLNQEQKGDCAAALALCNEAISKLRLAMHDASASTHSRAIVDKKLQISIRKARSLQDRMQHQQPAQPLPPPTSHPPQGGTMAQPTSEQTGPLQVLLSQEVPLEPNKEVEFGSSSFFHPPASCHELHSSLYPESSSLPPSESNPSNRISPNFQSASADFHDQVPSFPYRQGLAERSTRTEDDAHRGVEFAGTTASGPRDCRECCSSSKLEEVPNITPVLTPQYKPKANTVNSGSLPTLFPCPHPPQAASPEKDNQHSPCSKLASSPARPSTDHSGACRASSSPTQQCSWDPLQKTNKYSRASSQEVLLPSQDEYGTAEGCKAEAFSTKGHVRSLAEQFQKMHAVSQRKGSHEKGWIAAVCQEEKSPKLSQKSFINSSSSGCRQLIHQNQENQSQPSETLHSTVDLRDGVVSLEGFSAQHVSSKSVCSHSEELCRRGGQNVADPAPYLERHCHDGGMKQVDDGAASSVVASMPVDCWVDNVTRYYSSQKAKKNAEWLPVPGRSPPLSEQRAVGDDLSRIPVHLHPQWNQDPEQELSELESLYQTSLQASQATRPFLGRQDSARYPFDQSVSAKLTSRKLHATAGMGLSKTPTAELERSLCGSTASSVSKEAPNPRKMSVDSSHRSSSSTSLPFPHDPPVFPLDPQHNPNLVQHLPHDVLMPSMVGKARKQSGDQKNNLQKLLVVPDRGEALQGEDYPGVALNSGSLPCAPKGSLSPGQKPLVNPHLGGGTPSVSGHLLPTSCPAWQAAPFPDKGAAFRGKQAGQPGRSSQGGFLQQPSQHPTRGSHPGGCRLPAPTDYSTLRTPHQPSWDPRASPGCPVPPSCVKAPGPRRVDMPPEDDWRQNSYTPQPGRRRVLPTRGMDGTFSSASEAHRNMLARAAAAATGTMQKNGW
SIO_010081: USP54
subclass of: SO_0000673
so part of: USP54
location: complement(join(1155975..1156636,1157364..1157550,1159015..1159133,1161236..1162680,1164938..1165130,1166286..1166405,1169214..1169387,1170454..1170590,1171290..1171524,1172555..1172935,1173225..1173356,1177104..1177274,1179340..1179508,1180809..1180958,1182166..1182312,1184495..1184600,1185380..1185462,1185618..1185731,1187165..1187299,1195737..1195829,1197826..1197972))
location: region:1155975-1197972:-1
so has part: feature:1197826-1197972:-1:exon
so has part: feature:1195737-1195829:-1:exon
so has part: feature:1187165-1187299:-1:exon
so has part: feature:1185618-1185731:-1:exon
so has part: feature:1185380-1185462:-1:exon
so has part: feature:1184495-1184600:-1:exon
so has part: feature:1182166-1182312:-1:exon
so has part: feature:1180809-1180958:-1:exon
so has part: feature:1179340-1179508:-1:exon
so has part: feature:1177104-1177274:-1:exon
so has part: feature:1173225-1173356:-1:exon
so has part: feature:1172555-1172935:-1:exon
so has part: feature:1171290-1171524:-1:exon
so has part: feature:1170454-1170590:-1:exon
so has part: feature:1169214-1169387:-1:exon
so has part: feature:1166286-1166405:-1:exon
so has part: feature:1164938-1165130:-1:exon
so has part: feature:1161236-1162680:-1:exon
so has part: feature:1159015-1159133:-1:exon
so has part: feature:1157364-1157550:-1:exon
so has part: feature:1155975-1156636:-1:exon

XP_030308996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1197826-1197972:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1195737-1195829:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1187165-1187299:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1185618-1185731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1185380-1185462:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1184495-1184600:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1182166-1182312:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1180809-1180958:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1179340-1179508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1177104-1177274:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1173225-1173356:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1172555-1172935:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1171290-1171524:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1170454-1170590:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1169214-1169387:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1166286-1166405:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1164938-1165130:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1161236-1162680:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1159015-1159133:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1157364-1157550:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1155975-1156636:-1:exon

USP54
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: USP54
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X1
translation: MSWKRNYFSVGRGNVQGMFTPRNTTSIAPSKGLSNEPGQNSCFLNSALQVLWHLDIFRRSFRQITTHKCMGDSCIFCALKSIFNQFQCSSEKVLPSDALRTALAKTFQDEQRFQLGIMDDAAECFENLLMRIHFHIADETKEDICTAPHCVSHQKFAMTLFEQCVCTSCGATSDPLPFIQMVHYISTTSLCNQAICMLERREKPTPDMFGELLQNASTMGDLRNCPSNCGEKIRIRRVLMNSPQIITIGLVWDSDHSDLAEDVIHSLGTCLKLGDLFFRVTDDRAKHSELYLVGMICYYGKHYSTFFFQTKIRKWMYFDDAHVKEIGPKWKDVVTKCIKGHYQPLLLLYADPRGTPVSTQDLPPQVDLQQYSRTCYDSEDSGREPSISSDTRTDSSTDSYPYKQAHHESVVSHFSSDSQGTVIYNVENDAASQSSRDTGHLTDSECNQKHLSKKGSLAERKRSSSRSRRKGEEAQSSGYHSEGETLKEKQAPRTAPKPSSSTSRLREFKETVSNMIHSRPQQISQTIQTSPRGGSSVDQAETRPSKSLPAHSRDWEVESTSSESKSSSSSRYRPTWRPKRESLNIDSIFSKDKRKHYGYTQLSPFSEEAGKELIENEGKEHGVQEPRSSQSNVRSKRGVLGRGSQAPVVDQHPHLIQRMESGYESSERNSNSPVSLDMPLSESSSTHRDAHMKRGGGLVPAWRNIPKSHSSSILEVESSSLGSWATSPHTIGNGGEMFAPLKSELDELQEEVARRAHEQELRRKREKEMEAAMGFNPRPSRFMDLDELQNQGRSDGFEKSMQEADSIFEESLNQEQKGDCAAALALCNEAISKLRLAMHDASASTHSRAIVDKKLQISIRKARSLQDRMQHQQPAQPLPPPTSHPPQGGTMAQPTSEQTGPLQVLLSQEVPLEPNKEVEFGSSSFFHPPASCHELHSSLYPESSSLPPSESNPSNRISPNFQSASADFHDQVPSFPYRQGLAERSTRTEDDAHRGVEFAGTTASGPRDCRECCSSSKLEEVPNITPVLTPQYKPKANTVNSGSLPTLFPCPHPPQAASPEKDNQHSPCSKLASSPARPSTDHSGACRASSSPTQQCSWDPLQKTNKYSRASSQEVLLPSQDEYGTAEGCKAEAFSTKGHVRSLAEQFQKMHAVSQRKGSHEKGWIAAVCQEEKSPKLSQKSFINSSSSGCRQLIHQNQENQSQPSETLHSTVDLRDGVVSLEGFSAQHVSSKSVCSHSEELCRRGGQNVADPAPYLERHCHDGGMKQVDDGAASSVVASMPVDCWVDNVTRYYSSQKAKKNAEWLPVPGRSPPLSEQRAVGDDLSRIPVHLHPQWNQDPEQELSELESLYQTSLQASQATRPFLGRQDSARYPFDQSVSAKLTSRKLHATAGMGLSKTPTAELERSLCGSTASSVSKVTYTREHSREPEEEEMYSAENFRRIARSLSGTVISNREETLVSSHSFEAPNPRKMSVDSSHRSSSSTSLPFPHDPPVFPLDPQHNPNLVQHLPHDVLMPSMVGKARKQSGDQKNNLQKLLVVPDRGEALQGEDYPGVALNSGSLPCAPKGSLSPGQKPLVNPHLGGGTPSVSGHLLPTSCPAWQAAPFPDKGAAFRGKQAGQPGRSSQGGFLQQPSQHPTRGSHPGGCRLPAPTDYSTLRTPHQPSWDPRASPGCPVPPSCVKAPGPRRVDMPPEDDWRQNSYTPQPGRRRVLPTRGMDGTFSSASEAHRNMLARAAAAATGTMQKNGW
SIO_010081: USP54
subclass of: SO_0000673
so part of: USP54
location: complement(join(1155975..1156636,1157364..1157550,1158424..1158564,1159015..1159133,1161236..1162680,1164938..1165130,1166286..1166405,1169214..1169387,1170454..1170590,1171290..1171524,1172555..1172935,1173225..1173356,1177104..1177274,1179340..1179508,1180809..1180958,1182166..1182312,1184495..1184600,1185380..1185462,1185618..1185731,1187165..1187299,1195737..1195829,1197826..1197972))
location: region:1155975-1197972:-1
so has part: feature:1197826-1197972:-1:exon
so has part: feature:1195737-1195829:-1:exon
so has part: feature:1187165-1187299:-1:exon
so has part: feature:1185618-1185731:-1:exon
so has part: feature:1185380-1185462:-1:exon
so has part: feature:1184495-1184600:-1:exon
so has part: feature:1182166-1182312:-1:exon
so has part: feature:1180809-1180958:-1:exon
so has part: feature:1179340-1179508:-1:exon
so has part: feature:1177104-1177274:-1:exon
so has part: feature:1173225-1173356:-1:exon
so has part: feature:1172555-1172935:-1:exon
so has part: feature:1171290-1171524:-1:exon
so has part: feature:1170454-1170590:-1:exon
so has part: feature:1169214-1169387:-1:exon
so has part: feature:1166286-1166405:-1:exon
so has part: feature:1164938-1165130:-1:exon
so has part: feature:1161236-1162680:-1:exon
so has part: feature:1159015-1159133:-1:exon
so has part: feature:1158424-1158564:-1:exon
so has part: feature:1157364-1157550:-1:exon
so has part: feature:1155975-1156636:-1:exon

XP_030308991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1197826-1197972:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1195737-1195829:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1187165-1187299:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1185618-1185731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1185380-1185462:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1184495-1184600:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1182166-1182312:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1180809-1180958:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1179340-1179508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1177104-1177274:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1173225-1173356:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1172555-1172935:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1171290-1171524:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1170454-1170590:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1169214-1169387:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1166286-1166405:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1164938-1165130:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1161236-1162680:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1159015-1159133:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1158424-1158564:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1157364-1157550:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1155975-1156636:-1:exon

USP54
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: USP54
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X1
translation: MSWKRNYFSVGRGNVQGMFTPRNTTSIAPSKGLSNEPGQNSCFLNSALQVLWHLDIFRRSFRQITTHKCMGDSCIFCALKSIFNQFQCSSEKVLPSDALRTALAKTFQDEQRFQLGIMDDAAECFENLLMRIHFHIADETKEDICTAPHCVSHQKFAMTLFEQCVCTSCGATSDPLPFIQMVHYISTTSLCNQAICMLERREKPTPDMFGELLQNASTMGDLRNCPSNCGEKIRIRRVLMNSPQIITIGLVWDSDHSDLAEDVIHSLGTCLKLGDLFFRVTDDRAKHSELYLVGMICYYGKHYSTFFFQTKIRKWMYFDDAHVKEIGPKWKDVVTKCIKGHYQPLLLLYADPRGTPVSTQDLPPQVDLQQYSRTCYDSEDSGREPSISSDTRTDSSTDSYPYKQAHHESVVSHFSSDSQGTVIYNVENDAASQSSRDTGHLTDSECNQKHLSKKGSLAERKRSSSRSRRKGEEAQSSGYHSEGETLKEKQAPRTAPKPSSSTSRLREFKETVSNMIHSRPQQISQTIQTSPRGGSSVDQAETRPSKSLPAHSRDWEVESTSSESKSSSSSRYRPTWRPKRESLNIDSIFSKDKRKHYGYTQLSPFSEEAGKELIENEGKEHGVQEPRSSQSNVRSKRGVLGRGSQAPVVDQHPHLIQRMESGYESSERNSNSPVSLDMPLSESSSTHRDAHMKRGGGLVPAWRNIPKSHSSSILEVESSSLGSWATSPHTIGNGGEMFAPLKSELDELQEEVARRAHEQELRRKREKEMEAAMGFNPRPSRFMDLDELQNQGRSDGFEKSMQEADSIFEESLNQEQKGDCAAALALCNEAISKLRLAMHDASASTHSRAIVDKKLQISIRKARSLQDRMQHQQPAQPLPPPTSHPPQGGTMAQPTSEQTGPLQVLLSQEVPLEPNKEVEFGSSSFFHPPASCHELHSSLYPESSSLPPSESNPSNRISPNFQSASADFHDQVPSFPYRQGLAERSTRTEDDAHRGVEFAGTTASGPRDCRECCSSSKLEEVPNITPVLTPQYKPKANTVNSGSLPTLFPCPHPPQAASPEKDNQHSPCSKLASSPARPSTDHSGACRASSSPTQQCSWDPLQKTNKYSRASSQEVLLPSQDEYGTAEGCKAEAFSTKGHVRSLAEQFQKMHAVSQRKGSHEKGWIAAVCQEEKSPKLSQKSFINSSSSGCRQLIHQNQENQSQPSETLHSTVDLRDGVVSLEGFSAQHVSSKSVCSHSEELCRRGGQNVADPAPYLERHCHDGGMKQVDDGAASSVVASMPVDCWVDNVTRYYSSQKAKKNAEWLPVPGRSPPLSEQRAVGDDLSRIPVHLHPQWNQDPEQELSELESLYQTSLQASQATRPFLGRQDSARYPFDQSVSAKLTSRKLHATAGMGLSKTPTAELERSLCGSTASSVSKVTYTREHSREPEEEEMYSAENFRRIARSLSGTVISNREETLVSSHSFEAPNPRKMSVDSSHRSSSSTSLPFPHDPPVFPLDPQHNPNLVQHLPHDVLMPSMVGKARKQSGDQKNNLQKLLVVPDRGEALQGEDYPGVALNSGSLPCAPKGSLSPGQKPLVNPHLGGGTPSVSGHLLPTSCPAWQAAPFPDKGAAFRGKQAGQPGRSSQGGFLQQPSQHPTRGSHPGGCRLPAPTDYSTLRTPHQPSWDPRASPGCPVPPSCVKAPGPRRVDMPPEDDWRQNSYTPQPGRRRVLPTRGMDGTFSSASEAHRNMLARAAAAATGTMQKNGW
SIO_010081: USP54
subclass of: SO_0000673
so part of: USP54
location: complement(join(1155975..1156636,1157364..1157550,1158424..1158564,1159015..1159133,1161236..1162680,1164938..1165130,1166286..1166405,1169214..1169387,1170454..1170590,1171290..1171524,1172555..1172935,1173225..1173356,1177104..1177274,1179340..1179508,1180809..1180958,1182166..1182312,1184495..1184600,1185380..1185462,1185618..1185731,1187165..1187299,1195737..1195829,1197826..1197972))
location: region:1155975-1197972:-1
so has part: feature:1197826-1197972:-1:exon
so has part: feature:1195737-1195829:-1:exon
so has part: feature:1187165-1187299:-1:exon
so has part: feature:1185618-1185731:-1:exon
so has part: feature:1185380-1185462:-1:exon
so has part: feature:1184495-1184600:-1:exon
so has part: feature:1182166-1182312:-1:exon
so has part: feature:1180809-1180958:-1:exon
so has part: feature:1179340-1179508:-1:exon
so has part: feature:1177104-1177274:-1:exon
so has part: feature:1173225-1173356:-1:exon
so has part: feature:1172555-1172935:-1:exon
so has part: feature:1171290-1171524:-1:exon
so has part: feature:1170454-1170590:-1:exon
so has part: feature:1169214-1169387:-1:exon
so has part: feature:1166286-1166405:-1:exon
so has part: feature:1164938-1165130:-1:exon
so has part: feature:1161236-1162680:-1:exon
so has part: feature:1159015-1159133:-1:exon
so has part: feature:1158424-1158564:-1:exon
so has part: feature:1157364-1157550:-1:exon
so has part: feature:1155975-1156636:-1:exon

XP_030308992.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1197826-1197972:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1195737-1195829:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1187165-1187299:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1185618-1185731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1185380-1185462:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1184495-1184600:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1182166-1182312:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1180809-1180958:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1179340-1179508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1177104-1177274:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1173225-1173356:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1172555-1172935:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1171290-1171524:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1170454-1170590:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1169214-1169387:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1166286-1166405:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1164938-1165130:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1161236-1162680:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1159015-1159133:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1158424-1158564:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1157364-1157550:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1155975-1156636:-1:exon

USP54
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: USP54
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X1
translation: MSWKRNYFSVGRGNVQGMFTPRNTTSIAPSKGLSNEPGQNSCFLNSALQVLWHLDIFRRSFRQITTHKCMGDSCIFCALKSIFNQFQCSSEKVLPSDALRTALAKTFQDEQRFQLGIMDDAAECFENLLMRIHFHIADETKEDICTAPHCVSHQKFAMTLFEQCVCTSCGATSDPLPFIQMVHYISTTSLCNQAICMLERREKPTPDMFGELLQNASTMGDLRNCPSNCGEKIRIRRVLMNSPQIITIGLVWDSDHSDLAEDVIHSLGTCLKLGDLFFRVTDDRAKHSELYLVGMICYYGKHYSTFFFQTKIRKWMYFDDAHVKEIGPKWKDVVTKCIKGHYQPLLLLYADPRGTPVSTQDLPPQVDLQQYSRTCYDSEDSGREPSISSDTRTDSSTDSYPYKQAHHESVVSHFSSDSQGTVIYNVENDAASQSSRDTGHLTDSECNQKHLSKKGSLAERKRSSSRSRRKGEEAQSSGYHSEGETLKEKQAPRTAPKPSSSTSRLREFKETVSNMIHSRPQQISQTIQTSPRGGSSVDQAETRPSKSLPAHSRDWEVESTSSESKSSSSSRYRPTWRPKRESLNIDSIFSKDKRKHYGYTQLSPFSEEAGKELIENEGKEHGVQEPRSSQSNVRSKRGVLGRGSQAPVVDQHPHLIQRMESGYESSERNSNSPVSLDMPLSESSSTHRDAHMKRGGGLVPAWRNIPKSHSSSILEVESSSLGSWATSPHTIGNGGEMFAPLKSELDELQEEVARRAHEQELRRKREKEMEAAMGFNPRPSRFMDLDELQNQGRSDGFEKSMQEADSIFEESLNQEQKGDCAAALALCNEAISKLRLAMHDASASTHSRAIVDKKLQISIRKARSLQDRMQHQQPAQPLPPPTSHPPQGGTMAQPTSEQTGPLQVLLSQEVPLEPNKEVEFGSSSFFHPPASCHELHSSLYPESSSLPPSESNPSNRISPNFQSASADFHDQVPSFPYRQGLAERSTRTEDDAHRGVEFAGTTASGPRDCRECCSSSKLEEVPNITPVLTPQYKPKANTVNSGSLPTLFPCPHPPQAASPEKDNQHSPCSKLASSPARPSTDHSGACRASSSPTQQCSWDPLQKTNKYSRASSQEVLLPSQDEYGTAEGCKAEAFSTKGHVRSLAEQFQKMHAVSQRKGSHEKGWIAAVCQEEKSPKLSQKSFINSSSSGCRQLIHQNQENQSQPSETLHSTVDLRDGVVSLEGFSAQHVSSKSVCSHSEELCRRGGQNVADPAPYLERHCHDGGMKQVDDGAASSVVASMPVDCWVDNVTRYYSSQKAKKNAEWLPVPGRSPPLSEQRAVGDDLSRIPVHLHPQWNQDPEQELSELESLYQTSLQASQATRPFLGRQDSARYPFDQSVSAKLTSRKLHATAGMGLSKTPTAELERSLCGSTASSVSKVTYTREHSREPEEEEMYSAENFRRIARSLSGTVISNREETLVSSHSFEAPNPRKMSVDSSHRSSSSTSLPFPHDPPVFPLDPQHNPNLVQHLPHDVLMPSMVGKARKQSGDQKNNLQKLLVVPDRGEALQGEDYPGVALNSGSLPCAPKGSLSPGQKPLVNPHLGGGTPSVSGHLLPTSCPAWQAAPFPDKGAAFRGKQAGQPGRSSQGGFLQQPSQHPTRGSHPGGCRLPAPTDYSTLRTPHQPSWDPRASPGCPVPPSCVKAPGPRRVDMPPEDDWRQNSYTPQPGRRRVLPTRGMDGTFSSASEAHRNMLARAAAAATGTMQKNGW
SIO_010081: USP54
subclass of: SO_0000673
so part of: USP54
location: complement(join(1155975..1156636,1157364..1157550,1158424..1158564,1159015..1159133,1161236..1162680,1164938..1165130,1166286..1166405,1169214..1169387,1170454..1170590,1171290..1171524,1172555..1172935,1173225..1173356,1177104..1177274,1179340..1179508,1180809..1180958,1182166..1182312,1184495..1184600,1185380..1185462,1185618..1185731,1187165..1187299,1195737..1195829,1197826..1197972))
location: region:1155975-1197972:-1
so has part: feature:1197826-1197972:-1:exon
so has part: feature:1195737-1195829:-1:exon
so has part: feature:1187165-1187299:-1:exon
so has part: feature:1185618-1185731:-1:exon
so has part: feature:1185380-1185462:-1:exon
so has part: feature:1184495-1184600:-1:exon
so has part: feature:1182166-1182312:-1:exon
so has part: feature:1180809-1180958:-1:exon
so has part: feature:1179340-1179508:-1:exon
so has part: feature:1177104-1177274:-1:exon
so has part: feature:1173225-1173356:-1:exon
so has part: feature:1172555-1172935:-1:exon
so has part: feature:1171290-1171524:-1:exon
so has part: feature:1170454-1170590:-1:exon
so has part: feature:1169214-1169387:-1:exon
so has part: feature:1166286-1166405:-1:exon
so has part: feature:1164938-1165130:-1:exon
so has part: feature:1161236-1162680:-1:exon
so has part: feature:1159015-1159133:-1:exon
so has part: feature:1158424-1158564:-1:exon
so has part: feature:1157364-1157550:-1:exon
so has part: feature:1155975-1156636:-1:exon

XP_030308993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1197826-1197972:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1195737-1195829:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1187165-1187299:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1185618-1185731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1185380-1185462:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1184495-1184600:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1182166-1182312:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1180809-1180958:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1179340-1179508:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1177104-1177274:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1173225-1173356:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1172555-1172935:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1171290-1171524:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1170454-1170590:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1169214-1169387:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1166286-1166405:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1164938-1165130:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1161236-1162680:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1159015-1159133:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1158424-1158564:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1157364-1157550:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1155975-1156636:-1:exon

MYOZ1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: MYOZ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1246612..1259043)
location: region:1246612-1259043:-1
so has part: feature:1246612-1259043:-1:exon
subclass of: SO_0000010

103537686
type: Gene
SIO_000068: ncbigene

position:1246612:-1
position: 1246612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1259043:-1
position: 1259043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1246612-1259043:-1:exon

MYOZ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MYOZ1
product: myozenin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008503997.2
SIO_010081: MYOZ1
subclass of: SO_0000673
so part of: MYOZ1
location: complement(join(1246612..1246929,1246963..1247220,1248010..1248169,1250182..1250410,1254956..1255137,1256729..1256830,1258842..1259043))
location: region:1246612-1259043:-1
so has part: feature:1258842-1259043:-1:exon
so has part: feature:1256729-1256830:-1:exon
so has part: feature:1254956-1255137:-1:exon
so has part: feature:1250182-1250410:-1:exon
so has part: feature:1248010-1248169:-1:exon
so has part: feature:1246963-1247220:-1:exon
so has part: feature:1246612-1246929:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1258842-1259043:-1:exon

position:1258842:-1
position: 1258842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1256729-1256830:-1:exon

position:1256729:-1
position: 1256729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1256830:-1
position: 1256830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1254956-1255137:-1:exon

position:1254956:-1
position: 1254956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1255137:-1
position: 1255137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1250182-1250410:-1:exon

position:1250182:-1
position: 1250182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1250410:-1
position: 1250410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1248010-1248169:-1:exon

position:1248010:-1
position: 1248010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1248169:-1
position: 1248169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1246963-1247220:-1:exon

position:1246963:-1
position: 1246963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1247220:-1
position: 1247220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1246612-1246929:-1:exon

position:1246929:-1
position: 1246929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MYOZ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MYOZ1
product: myozenin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_030453599.1
SIO_010081: MYOZ1
subclass of: SO_0000673
so part of: MYOZ1
location: complement(join(1246612..1247220,1248010..1248169,1250182..1250410,1254956..1255137,1258842..1259041))
location: region:1246612-1259041:-1
so has part: feature:1258842-1259041:-1:exon
so has part: feature:1254956-1255137:-1:exon
so has part: feature:1250182-1250410:-1:exon
so has part: feature:1248010-1248169:-1:exon
so has part: feature:1246612-1247220:-1:exon

position:1259041:-1
position: 1259041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1258842-1259041:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1254956-1255137:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1250182-1250410:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1248010-1248169:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1246612-1247220:-1:exon

MYOZ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MYOZ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myozenin-1 isoform X1
translation: MPLAGTPAPVKRKKPTKPIVKLTEEVMPQEVSKLNLGKKISIPRDVMLEELSLLTNKGSKMFKLRQLRVEKFIYENNPDAFTDSSVDHFQKFIPPGGHYGEDAQGYAQGRMVGGVTAGQQGSSQHHAGSHSPGSKGGPGESDGEHVGDSDGTAGEGGDGAEKDGKAGGKKVTIFKTYISPWERAMGISPEDKSQMTIDLLSYSPKADSPHYKSFNRTAMPYGGFEKAAKRLTFKVPQFDICPLLPDSLMMYNQNLGNRPSFNRTPIPWIPSGDSEYHIDLSAPRSGETEEL
SIO_010081: MYOZ1
subclass of: SO_0000673
so part of: MYOZ1
location: complement(join(1246992..1247220,1248010..1248169,1250182..1250410,1254956..1255137,1256729..1256804))
location: region:1246992-1256804:-1
so has part: feature:1256729-1256804:-1:exon
so has part: feature:1254956-1255137:-1:exon
so has part: feature:1250182-1250410:-1:exon
so has part: feature:1248010-1248169:-1:exon
so has part: feature:1246992-1247220:-1:exon

XP_008502219.2
type: Protein
SIO_000068: ncbiprotein

position:1246992:-1
position: 1246992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1256804:-1
position: 1256804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1256729-1256804:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1254956-1255137:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1250182-1250410:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1248010-1248169:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1246992-1247220:-1:exon

MYOZ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MYOZ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myozenin-1 isoform X2
translation: MPQEVSKLNLGKKISIPRDVMLEELSLLTNKGSKMFKLRQLRVEKFIYENNPDAFTDSSVDHFQKFIPPGGHYGEDAQGYAQGRMVGGVTAGQQGSSQHHAGSHSPGSKGGPGESDGEHVGDSDGTAGEGGDGAEKDGKAGGKKVTIFKTYISPWERAMGISPEDKSQMTIDLLSYSPKADSPHYKSFNRTAMPYGGFEKAAKRLTFKVPQFDICPLLPDSLMMYNQNLGNRPSFNRTPIPWIPSGDSEYHIDLSAPRSGETEEL
SIO_010081: MYOZ1
subclass of: SO_0000673
so part of: MYOZ1
location: complement(join(1246992..1247220,1248010..1248169,1250182..1250410,1254956..1255135))
location: region:1246992-1255135:-1
so has part: feature:1254956-1255135:-1:exon
so has part: feature:1250182-1250410:-1:exon
so has part: feature:1248010-1248169:-1:exon
so has part: feature:1246992-1247220:-1:exon

XP_030309459.1
type: Protein
SIO_000068: ncbiprotein

position:1255135:-1
position: 1255135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1254956-1255135:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1250182-1250410:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1248010-1248169:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1246992-1247220:-1:exon

SYNPO2L
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SYNPO2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1261935..1292648)
location: region:1261935-1292648:-1
so has part: feature:1261935-1292648:-1:exon
subclass of: SO_0000010

103537687
type: Gene
SIO_000068: ncbigene

position:1261935:-1
position: 1261935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1292648:-1
position: 1292648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1261935-1292648:-1:exon

SYNPO2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SYNPO2L
product: synaptopodin 2 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030453597.1
SIO_010081: SYNPO2L
subclass of: SO_0000673
so part of: SYNPO2L
location: complement(join(1261935..1264520,1264551..1266913,1278267..1278922,1281268..1281419,1292365..1292648))
location: region:1261935-1292648:-1
so has part: feature:1292365-1292648:-1:exon
so has part: feature:1281268-1281419:-1:exon
so has part: feature:1278267-1278922:-1:exon
so has part: feature:1264551-1266913:-1:exon
so has part: feature:1261935-1264520:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1292365-1292648:-1:exon

position:1292365:-1
position: 1292365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1281268-1281419:-1:exon

position:1281268:-1
position: 1281268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1281419:-1
position: 1281419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1278267-1278922:-1:exon

position:1278267:-1
position: 1278267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1278922:-1
position: 1278922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1264551-1266913:-1:exon

position:1264551:-1
position: 1264551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1266913:-1
position: 1266913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1261935-1264520:-1:exon

position:1264520:-1
position: 1264520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SYNPO2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SYNPO2L
product: synaptopodin 2 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_008503998.2
SIO_010081: SYNPO2L
subclass of: SO_0000673
so part of: SYNPO2L
location: complement(join(1261935..1266913,1278267..1278922,1281268..1281419,1292365..1292648))
location: region:1261935-1292648:-1
so has part: feature:1292365-1292648:-1:exon
so has part: feature:1281268-1281419:-1:exon
so has part: feature:1278267-1278922:-1:exon
so has part: feature:1261935-1266913:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1292365-1292648:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1281268-1281419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1278267-1278922:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1261935-1266913:-1:exon

SYNPO2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SYNPO2L
product: synaptopodin 2 like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030453598.1
SIO_010081: SYNPO2L
subclass of: SO_0000673
so part of: SYNPO2L
location: complement(join(1261935..1266913,1278267..1278922,1281268..1281419,1287737..1287779))
location: region:1261935-1287779:-1
so has part: feature:1287737-1287779:-1:exon
so has part: feature:1281268-1281419:-1:exon
so has part: feature:1278267-1278922:-1:exon
so has part: feature:1261935-1266913:-1:exon

position:1287779:-1
position: 1287779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1287737-1287779:-1:exon

position:1287737:-1
position: 1287737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1281268-1281419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1278267-1278922:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1261935-1266913:-1:exon

SYNPO2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SYNPO2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptopodin 2-like protein isoform X1
translation: MGAEEEMLITLSGGAPWGFRLQGGSEQKKPLQVSKIRKRSKACRGGLWENDVLVSINGKSCAGLSHASAMQIIDSSNGTLNIRVKRVVGGDQTGPRLQRSSSPGTRVLSPPSPLSPPAQLLSPDPAGATPQPSQPRRPQKHLESLTSPPDSEAYYGETDSDADNVAQEKHRRARKKSPRSPPDSTASKGEAPQDEVSLSEQSGYESMPEAAAQEGAEVARSSGVAKREISCLPGSRAETPFSDSEGQLRPPSAEGREPSPEAMLLPHATKAIQAERHLIPMVGPVEHPVDEDLTTTYAEKAKQAKLHRHESVQEKNVKEAKTKCRTIASLLTDAPNPHSKGVLMFKKRRQRAKKYTLVSFGSVDEDRSYEEEDGVFPTSESEFDEEGFSDARSLTNHSDWDNTYLDIEKARSDSEQKEEKQKGLTEASGKGARLFEQQRERAGKYTVEKVSTEKSPQLAPAAQLQQGTVNGDMPVPQKATSLPLSIQLEGMEVPSKQTATLPTQLLAPPSPTFFLPPPSTPEPFSASTTSMFNRSARPFTPGITAQRSATSSVIFRPSAPRKPSESLGGQSTVVPPFSPPAPGTPGSAPAATHCAPLSSSTSLYIPAPGRPTPQLESQPGGGGSAPETKPAASTARTSTSSIFLSAPSKPGGEAASTAPQLRVPGTASSSLYISPAPSQHTRGSSPVPNQPSPAASPAMPRPPSEPLTSREQRIAVPAPRTGILQEARRRGNKKPMFSKIEEKKKNSPNPELLSLVQNLDEKPKGDHPGAGFESGPEEDFLSLGAEACNFMQSSGRKFKTPPPVAPKPQQQDAGLVNGAQDMPQLKGKGAELFAKRQSRMDKYVVETTPKPESKPRTPSPSPSLPSSWKYSPNIRAPPPIAYNPMHSPFYPLAASKSQASKAESKVKKAPGQKSGIKVIDVMRHQPYQLKSAMFCFGEPPSPSAQEPPGKPQASSSFPAAKQVPVKTAKTQEIRRFSTPAPMPASSSLAPTVLVPRSATTLDEPLWRTEMAASAPATPAPFQVELSQSPPKPYPSSPEPGQGGQGLSPNPASASRFQVARPKFSAARTGMQANVWRPSFGHH
SIO_010081: SYNPO2L
subclass of: SO_0000673
so part of: SYNPO2L
location: complement(join(1264578..1266913,1278267..1278922,1281268..1281419,1292365..1292469))
location: region:1264578-1292469:-1
so has part: feature:1292365-1292469:-1:exon
so has part: feature:1281268-1281419:-1:exon
so has part: feature:1278267-1278922:-1:exon
so has part: feature:1264578-1266913:-1:exon

XP_008502220.2
type: Protein
SIO_000068: ncbiprotein

position:1264578:-1
position: 1264578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1292469:-1
position: 1292469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1292365-1292469:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1281268-1281419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1278267-1278922:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1264578-1266913:-1:exon

SYNPO2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SYNPO2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptopodin 2-like protein isoform X1
translation: MGAEEEMLITLSGGAPWGFRLQGGSEQKKPLQVSKIRKRSKACRGGLWENDVLVSINGKSCAGLSHASAMQIIDSSNGTLNIRVKRVVGGDQTGPRLQRSSSPGTRVLSPPSPLSPPAQLLSPDPAGATPQPSQPRRPQKHLESLTSPPDSEAYYGETDSDADNVAQEKHRRARKKSPRSPPDSTASKGEAPQDEVSLSEQSGYESMPEAAAQEGAEVARSSGVAKREISCLPGSRAETPFSDSEGQLRPPSAEGREPSPEAMLLPHATKAIQAERHLIPMVGPVEHPVDEDLTTTYAEKAKQAKLHRHESVQEKNVKEAKTKCRTIASLLTDAPNPHSKGVLMFKKRRQRAKKYTLVSFGSVDEDRSYEEEDGVFPTSESEFDEEGFSDARSLTNHSDWDNTYLDIEKARSDSEQKEEKQKGLTEASGKGARLFEQQRERAGKYTVEKVSTEKSPQLAPAAQLQQGTVNGDMPVPQKATSLPLSIQLEGMEVPSKQTATLPTQLLAPPSPTFFLPPPSTPEPFSASTTSMFNRSARPFTPGITAQRSATSSVIFRPSAPRKPSESLGGQSTVVPPFSPPAPGTPGSAPAATHCAPLSSSTSLYIPAPGRPTPQLESQPGGGGSAPETKPAASTARTSTSSIFLSAPSKPGGEAASTAPQLRVPGTASSSLYISPAPSQHTRGSSPVPNQPSPAASPAMPRPPSEPLTSREQRIAVPAPRTGILQEARRRGNKKPMFSKIEEKKKNSPNPELLSLVQNLDEKPKGDHPGAGFESGPEEDFLSLGAEACNFMQSSGRKFKTPPPVAPKPQQQDAGLVNGAQDMPQLKGKGAELFAKRQSRMDKYVVETTPKPESKPRTPSPSPSLPSSWKYSPNIRAPPPIAYNPMHSPFYPLAASKSQASKAESKVKKAPGQKSGIKVIDVMRHQPYQLKSAMFCFGEPPSPSAQEPPGKPQASSSFPAAKQVPVKTAKTQEIRRFSTPAPMPASSSLAPTVLVPRSATTLDEPLWRTEMAASAPATPAPFQVELSQSPPKPYPSSPEPGQGGQGLSPNPASASRFQVARPKFSAARTGMQANVWRPSFGHH
SIO_010081: SYNPO2L
subclass of: SO_0000673
so part of: SYNPO2L
location: complement(join(1264578..1266913,1278267..1278922,1281268..1281419,1292365..1292469))
location: region:1264578-1292469:-1
so has part: feature:1292365-1292469:-1:exon
so has part: feature:1281268-1281419:-1:exon
so has part: feature:1278267-1278922:-1:exon
so has part: feature:1264578-1266913:-1:exon

XP_030309457.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1292365-1292469:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1281268-1281419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1278267-1278922:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1264578-1266913:-1:exon

SYNPO2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SYNPO2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptopodin 2-like protein isoform X2
translation: MQIIDSSNGTLNIRVKRVVGGDQTGPRLQRSSSPGTRVLSPPSPLSPPAQLLSPDPAGATPQPSQPRRPQKHLESLTSPPDSEAYYGETDSDADNVAQEKHRRARKKSPRSPPDSTASKGEAPQDEVSLSEQSGYESMPEAAAQEGAEVARSSGVAKREISCLPGSRAETPFSDSEGQLRPPSAEGREPSPEAMLLPHATKAIQAERHLIPMVGPVEHPVDEDLTTTYAEKAKQAKLHRHESVQEKNVKEAKTKCRTIASLLTDAPNPHSKGVLMFKKRRQRAKKYTLVSFGSVDEDRSYEEEDGVFPTSESEFDEEGFSDARSLTNHSDWDNTYLDIEKARSDSEQKEEKQKGLTEASGKGARLFEQQRERAGKYTVEKVSTEKSPQLAPAAQLQQGTVNGDMPVPQKATSLPLSIQLEGMEVPSKQTATLPTQLLAPPSPTFFLPPPSTPEPFSASTTSMFNRSARPFTPGITAQRSATSSVIFRPSAPRKPSESLGGQSTVVPPFSPPAPGTPGSAPAATHCAPLSSSTSLYIPAPGRPTPQLESQPGGGGSAPETKPAASTARTSTSSIFLSAPSKPGGEAASTAPQLRVPGTASSSLYISPAPSQHTRGSSPVPNQPSPAASPAMPRPPSEPLTSREQRIAVPAPRTGILQEARRRGNKKPMFSKIEEKKKNSPNPELLSLVQNLDEKPKGDHPGAGFESGPEEDFLSLGAEACNFMQSSGRKFKTPPPVAPKPQQQDAGLVNGAQDMPQLKGKGAELFAKRQSRMDKYVVETTPKPESKPRTPSPSPSLPSSWKYSPNIRAPPPIAYNPMHSPFYPLAASKSQASKAESKVKKAPGQKSGIKVIDVMRHQPYQLKSAMFCFGEPPSPSAQEPPGKPQASSSFPAAKQVPVKTAKTQEIRRFSTPAPMPASSSLAPTVLVPRSATTLDEPLWRTEMAASAPATPAPFQVELSQSPPKPYPSSPEPGQGGQGLSPNPASASRFQVARPKFSAARTGMQANVWRPSFGHH
SIO_010081: SYNPO2L
subclass of: SO_0000673
so part of: SYNPO2L
location: complement(join(1264578..1266913,1278267..1278922,1281268..1281317))
location: region:1264578-1281317:-1
so has part: feature:1281268-1281317:-1:exon
so has part: feature:1278267-1278922:-1:exon
so has part: feature:1264578-1266913:-1:exon

XP_030309458.1
type: Protein
SIO_000068: ncbiprotein

position:1281317:-1
position: 1281317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1281268-1281317:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1278267-1278922:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1264578-1266913:-1:exon

SEC24C
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SEC24C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1294117..1328373
location: region:1294117-1328373:1
so has part: feature:1294117-1328373:1:exon
subclass of: SO_0000010

103537688
type: Gene
SIO_000068: ncbigene

position:1294117:1
position: 1294117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1328373:1
position: 1328373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1294117-1328373:1:exon

SEC24C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SEC24C
product: SEC24 homolog C, COPII coat complex component, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 ESTs, 3 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030452786.1
SIO_010081: SEC24C
subclass of: SO_0000673
so part of: SEC24C
location: join(1294117..1294175,1301464..1301657,1304450..1304536,1305750..1305867,1306521..1306675,1307846..1308283,1309561..1309691,1310988..1311056,1312616..1312727,1313534..1313661,1315376..1315514,1317504..1317619,1317910..1318034,1318291..1318482,1319202..1319295,1320022..1320138,1320667..1320837,1321177..1321273,1321574..1321719,1322185..1322323,1322772..1322890,1323498..1323677,1324343..1324534,1324931..1325020,1325469..1328373)
location: region:1294117-1328373:1
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urn:…
SIO_000300: 1
SIO_000628: feature:1294117-1294175:1:exon

position:1294175:1
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reference: sequence
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urn:…
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SIO_000628: feature:1301464-1301657:1:exon

position:1301464:1
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reference: sequence
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position:1301657:1
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reference: sequence
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urn:…
SIO_000300: 3
SIO_000628: feature:1304450-1304536:1:exon

position:1304450:1
position: 1304450
reference: sequence
type: ForwardStrandPosition
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position:1304536:1
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reference: sequence
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urn:…
SIO_000300: 4
SIO_000628: feature:1305750-1305867:1:exon

position:1305750:1
position: 1305750
reference: sequence
type: ForwardStrandPosition
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position:1305867:1
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urn:…
SIO_000300: 5
SIO_000628: feature:1306521-1306675:1:exon

position:1306521:1
position: 1306521
reference: sequence
type: ForwardStrandPosition
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position:1306675:1
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reference: sequence
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urn:…
SIO_000300: 6
SIO_000628: feature:1307846-1308283:1:exon

position:1307846:1
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reference: sequence
type: ForwardStrandPosition
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position:1308283:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 7
SIO_000628: feature:1309561-1309691:1:exon

position:1309561:1
position: 1309561
reference: sequence
type: ForwardStrandPosition
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position:1309691:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 8
SIO_000628: feature:1310988-1311056:1:exon

position:1310988:1
position: 1310988
reference: sequence
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position:1311056:1
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urn:…
SIO_000300: 9
SIO_000628: feature:1312616-1312727:1:exon

position:1312616:1
position: 1312616
reference: sequence
type: ForwardStrandPosition
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position:1312727:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 10
SIO_000628: feature:1313534-1313661:1:exon

position:1313534:1
position: 1313534
reference: sequence
type: ForwardStrandPosition
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position:1313661:1
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reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:1315376-1315514:1:exon

position:1315376:1
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reference: sequence
type: ForwardStrandPosition
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position:1315514:1
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urn:…
SIO_000300: 12
SIO_000628: feature:1317504-1317619:1:exon

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reference: sequence
type: ForwardStrandPosition
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position:1317619:1
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reference: sequence
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urn:…
SIO_000300: 13
SIO_000628: feature:1317910-1318034:1:exon

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reference: sequence
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urn:…
SIO_000300: 14
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urn:…
SIO_000300: 15
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urn:…
SIO_000300: 16
SIO_000628: feature:1320022-1320138:1:exon

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position:1320138:1
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urn:…
SIO_000300: 17
SIO_000628: feature:1320667-1320837:1:exon

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reference: sequence
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urn:…
SIO_000300: 18
SIO_000628: feature:1321177-1321273:1:exon

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reference: sequence
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position:1321273:1
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urn:…
SIO_000300: 19
SIO_000628: feature:1321574-1321719:1:exon

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reference: sequence
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position:1321719:1
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urn:…
SIO_000300: 20
SIO_000628: feature:1322185-1322323:1:exon

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reference: sequence
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urn:…
SIO_000300: 21
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urn:…
SIO_000300: 22
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urn:…
SIO_000300: 23
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urn:…
SIO_000300: 24
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reference: sequence
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urn:…
SIO_000300: 25
SIO_000628: feature:1325469-1328373:1:exon

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reference: sequence
type: ForwardStrandPosition
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SEC24C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SEC24C
product: SEC24 homolog C, COPII coat complex component, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 ESTs, 1 long SRA read, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030452788.1
SIO_010081: SEC24C
subclass of: SO_0000673
so part of: SEC24C
location: join(1294117..1294175,1301464..1301657,1304450..1304536,1305750..1305867,1306521..1306675,1307846..1308283,1309561..1309691,1312616..1312727,1313534..1313661,1315376..1315514,1317504..1317619,1317910..1318034,1318291..1318482,1319202..1319295,1320022..1320138,1320667..1320837,1321177..1321273,1321574..1321719,1322185..1322323,1322772..1322890,1323498..1323677,1324343..1324534,1324931..1325020,1325469..1328373)
location: region:1294117-1328373:1
so has part: feature:1294117-1294175:1:exon
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so has part: feature:1322185-1322323:1:exon
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so has part: feature:1324931-1325020:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:1294117-1294175:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1301464-1301657:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1304450-1304536:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1305750-1305867:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1306521-1306675:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1307846-1308283:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1309561-1309691:1:exon

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SIO_000300: 8
SIO_000628: feature:1312616-1312727:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1313534-1313661:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1315376-1315514:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1317504-1317619:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1317910-1318034:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1318291-1318482:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1319202-1319295:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1320022-1320138:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1320667-1320837:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1321177-1321273:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1321574-1321719:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1322185-1322323:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1322772-1322890:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1323498-1323677:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1324343-1324534:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1324931-1325020:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1325469-1328373:1:exon

SEC24C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SEC24C
product: SEC24 homolog C, COPII coat complex component, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 ESTs, 4 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030452789.1
SIO_010081: SEC24C
subclass of: SO_0000673
so part of: SEC24C
location: join(1294117..1294175,1301464..1301657,1305750..1305867,1306521..1306675,1307846..1308283,1309561..1309691,1310988..1311056,1312616..1312727,1313534..1313661,1315376..1315514,1317504..1317619,1317910..1318034,1318291..1318482,1319202..1319295,1320022..1320138,1320667..1320837,1321177..1321273,1321574..1321719,1322185..1322323,1322772..1322890,1323498..1323677,1324343..1324534,1324931..1325020,1325469..1328373)
location: region:1294117-1328373:1
so has part: feature:1294117-1294175:1:exon
so has part: feature:1301464-1301657:1:exon
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so has part: feature:1309561-1309691:1:exon
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so has part: feature:1317910-1318034:1:exon
so has part: feature:1318291-1318482:1:exon
so has part: feature:1319202-1319295:1:exon
so has part: feature:1320022-1320138:1:exon
so has part: feature:1320667-1320837:1:exon
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so has part: feature:1323498-1323677:1:exon
so has part: feature:1324343-1324534:1:exon
so has part: feature:1324931-1325020:1:exon
so has part: feature:1325469-1328373:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294117-1294175:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1301464-1301657:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1305750-1305867:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1306521-1306675:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1307846-1308283:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1309561-1309691:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1310988-1311056:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1312616-1312727:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1313534-1313661:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1315376-1315514:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1317504-1317619:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1317910-1318034:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1318291-1318482:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1319202-1319295:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1320022-1320138:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1320667-1320837:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1321177-1321273:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1321574-1321719:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1322185-1322323:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1322772-1322890:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1323498-1323677:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1324343-1324534:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1324931-1325020:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1325469-1328373:1:exon

SEC24C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SEC24C
product: SEC24 homolog C, COPII coat complex component, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 ESTs, 2 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030452790.1
SIO_010081: SEC24C
subclass of: SO_0000673
so part of: SEC24C
location: join(1294117..1294175,1301464..1301657,1305750..1305867,1306521..1306675,1307846..1308283,1309561..1309691,1312616..1312727,1313534..1313661,1315376..1315514,1317504..1317619,1317910..1318034,1318291..1318482,1319202..1319295,1320022..1320138,1320667..1320837,1321177..1321273,1321574..1321719,1322185..1322323,1322772..1322890,1323498..1323677,1324343..1324534,1324931..1325020,1325469..1328373)
location: region:1294117-1328373:1
so has part: feature:1294117-1294175:1:exon
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so has part: feature:1324343-1324534:1:exon
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so has part: feature:1325469-1328373:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294117-1294175:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1301464-1301657:1:exon

urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 17
SIO_000628: feature:1321574-1321719:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1322185-1322323:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1322772-1322890:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1323498-1323677:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1324343-1324534:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1324931-1325020:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1325469-1328373:1:exon

SEC24C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SEC24C
product: SEC24 homolog C, COPII coat complex component, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 ESTs, 2 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030452787.1
SIO_010081: SEC24C
subclass of: SO_0000673
so part of: SEC24C
location: join(1294568..1294584,1301464..1301657,1304450..1304536,1305750..1305867,1306521..1306675,1307846..1308283,1309561..1309691,1310988..1311056,1312616..1312727,1313534..1313661,1315376..1315514,1317504..1317619,1317910..1318034,1318291..1318482,1319202..1319295,1320022..1320138,1320667..1320837,1321177..1321273,1321574..1321719,1322185..1322323,1322772..1322890,1323498..1323677,1324343..1324534,1324931..1325020,1325469..1328373)
location: region:1294568-1328373:1
so has part: feature:1294568-1294584:1:exon
so has part: feature:1301464-1301657:1:exon
so has part: feature:1304450-1304536:1:exon
so has part: feature:1305750-1305867:1:exon
so has part: feature:1306521-1306675:1:exon
so has part: feature:1307846-1308283:1:exon
so has part: feature:1309561-1309691:1:exon
so has part: feature:1310988-1311056:1:exon
so has part: feature:1312616-1312727:1:exon
so has part: feature:1313534-1313661:1:exon
so has part: feature:1315376-1315514:1:exon
so has part: feature:1317504-1317619:1:exon
so has part: feature:1317910-1318034:1:exon
so has part: feature:1318291-1318482:1:exon
so has part: feature:1319202-1319295:1:exon
so has part: feature:1320022-1320138:1:exon
so has part: feature:1320667-1320837:1:exon
so has part: feature:1321177-1321273:1:exon
so has part: feature:1321574-1321719:1:exon
so has part: feature:1322185-1322323:1:exon
so has part: feature:1322772-1322890:1:exon
so has part: feature:1323498-1323677:1:exon
so has part: feature:1324343-1324534:1:exon
so has part: feature:1324931-1325020:1:exon
so has part: feature:1325469-1328373:1:exon

position:1294568:1
position: 1294568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1294568-1294584:1:exon

position:1294584:1
position: 1294584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1301464-1301657:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1304450-1304536:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1305750-1305867:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1306521-1306675:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1307846-1308283:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1309561-1309691:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1310988-1311056:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1312616-1312727:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1313534-1313661:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1315376-1315514:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1317504-1317619:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1317910-1318034:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1318291-1318482:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1319202-1319295:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1320022-1320138:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1320667-1320837:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1321177-1321273:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1321574-1321719:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1322185-1322323:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1322772-1322890:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1323498-1323677:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1324343-1324534:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1324931-1325020:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1325469-1328373:1:exon

SEC24C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SEC24C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein transport protein Sec24C isoform X1
translation: MSVNQQAHTGPPYGQPQPGYQGYQQPAYGGQPLPGEQYGAYNGPMPGYQQPGPPQGYFPSLGFPSKGSPVSINSDTSSLPPNFIGSLRAPPTTGAPPPASGAYNQFGHGDVQNGIPTSAAPVQRPPASQPFLPRSAPSQQYGPPPASVQQLTNHMAGMTIVSTTASAPPPAGLGYGPPTSAPPVSETFSAPYTPYTASPGPPPTTVFQGPPLAQPPFPAQPMSMQRPPTQVPGFAPPPPSTGLGPSPYPPPAGAPRPPPMPGPPLPGQSLAGPSASQPNHVSSPPPPSPMAGPHPGPPMGGLHGPPPPTHPPQPGYQIQQNGSFEQVRGPQPNYPGAYPGAPNYGSQPGAPPPPKRLDPDSIPSPQLNELPPQQKPRHRIDPDAIPSPIQVIEDDRNNRGSEPFVTGVRGQVPPLVTTNFLVKDQGNASPRYIRCTSYNIPCTSDMAKQSQVPLAAVIKPLATLPPEENLPYLVDHGESGPVRCNRCKAYMCPFMQFIEGGRRFQCCFCSCVTEVPPQYFQHLDHTGKRVDFYDRPELSLGSYEFLATVDYCKNNKFPSPPAFIFMIDVSYNAVKSGLVRLICEELKSLLDYLPREGNMEESAIRVGFVTYNKVLHFYNVKSSLAQPQMMVVSDVADMFVPLLDGFLVNVNESRTVITSLLDQIPEMFADTRETETVFAPVIQAGLEALKAAECAGKLFIFHTSLPIAEAPGKLKNRDDKKLINTDKEKTLFQPQTSFYNNLAKDCVAQGCCVDLFLFPNQYLDVATLGVVPYQTGGSIYKYAYFQLETDQDRFLNDLRRDVQKEVGFDAVMRVRTSTGIRATDFFGAFYMSNTTDVEMAGLDCDKTITVEFKHDDKLSEDSGALLQCALLYTSCAGQRRLRIHNLSLNCCTQLADLYRNCETDTLINYLAKYAYRGVLSSPVKAVRDALISQCAQILACYRKNCASPSSAGQLILPECMKLLPVYLNCVLKSDVLQPGPEVTTDDRAYIRQLVTSMDVAETNVFFYPRLLPLTKADVDSDSLPAAIRNSEERLCKGDIYLLENGLNIFVWVGVNVQQGLLQNLFGVSSFNQISNALNALPVLENPFSRKVRSIVDMLQVQRSRYMKLIIVKQEDKLEMLFKHFLVEDKSLNGGASYVDFLCHMHKEIRQLLS
SIO_010081: SEC24C
subclass of: SO_0000673
so part of: SEC24C
location: join(1301492..1301657,1304450..1304536,1305750..1305867,1306521..1306675,1307846..1308283,1309561..1309691,1310988..1311056,1312616..1312727,1313534..1313661,1315376..1315514,1317504..1317619,1317910..1318034,1318291..1318482,1319202..1319295,1320022..1320138,1320667..1320837,1321177..1321273,1321574..1321719,1322185..1322323,1322772..1322890,1323498..1323677,1324343..1324534,1324931..1325020,1325469..1325609)
location: region:1301492-1325609:1
so has part: feature:1301492-1301657:1:exon
so has part: feature:1304450-1304536:1:exon
so has part: feature:1305750-1305867:1:exon
so has part: feature:1306521-1306675:1:exon
so has part: feature:1307846-1308283:1:exon
so has part: feature:1309561-1309691:1:exon
so has part: feature:1310988-1311056:1:exon
so has part: feature:1312616-1312727:1:exon
so has part: feature:1313534-1313661:1:exon
so has part: feature:1315376-1315514:1:exon
so has part: feature:1317504-1317619:1:exon
so has part: feature:1317910-1318034:1:exon
so has part: feature:1318291-1318482:1:exon
so has part: feature:1319202-1319295:1:exon
so has part: feature:1320022-1320138:1:exon
so has part: feature:1320667-1320837:1:exon
so has part: feature:1321177-1321273:1:exon
so has part: feature:1321574-1321719:1:exon
so has part: feature:1322185-1322323:1:exon
so has part: feature:1322772-1322890:1:exon
so has part: feature:1323498-1323677:1:exon
so has part: feature:1324343-1324534:1:exon
so has part: feature:1324931-1325020:1:exon
so has part: feature:1325469-1325609:1:exon

XP_030308646.1
type: Protein
SIO_000068: ncbiprotein

position:1301492:1
position: 1301492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1325609:1
position: 1325609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1301492-1301657:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1304450-1304536:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1305750-1305867:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1306521-1306675:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1307846-1308283:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1309561-1309691:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1310988-1311056:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1312616-1312727:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1313534-1313661:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1315376-1315514:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1317504-1317619:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1317910-1318034:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1318291-1318482:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1319202-1319295:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1320022-1320138:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1320667-1320837:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1321177-1321273:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1321574-1321719:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1322185-1322323:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1322772-1322890:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1323498-1323677:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1324343-1324534:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1324931-1325020:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1325469-1325609:1:exon

SEC24C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SEC24C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein transport protein Sec24C isoform X1
translation: MSVNQQAHTGPPYGQPQPGYQGYQQPAYGGQPLPGEQYGAYNGPMPGYQQPGPPQGYFPSLGFPSKGSPVSINSDTSSLPPNFIGSLRAPPTTGAPPPASGAYNQFGHGDVQNGIPTSAAPVQRPPASQPFLPRSAPSQQYGPPPASVQQLTNHMAGMTIVSTTASAPPPAGLGYGPPTSAPPVSETFSAPYTPYTASPGPPPTTVFQGPPLAQPPFPAQPMSMQRPPTQVPGFAPPPPSTGLGPSPYPPPAGAPRPPPMPGPPLPGQSLAGPSASQPNHVSSPPPPSPMAGPHPGPPMGGLHGPPPPTHPPQPGYQIQQNGSFEQVRGPQPNYPGAYPGAPNYGSQPGAPPPPKRLDPDSIPSPQLNELPPQQKPRHRIDPDAIPSPIQVIEDDRNNRGSEPFVTGVRGQVPPLVTTNFLVKDQGNASPRYIRCTSYNIPCTSDMAKQSQVPLAAVIKPLATLPPEENLPYLVDHGESGPVRCNRCKAYMCPFMQFIEGGRRFQCCFCSCVTEVPPQYFQHLDHTGKRVDFYDRPELSLGSYEFLATVDYCKNNKFPSPPAFIFMIDVSYNAVKSGLVRLICEELKSLLDYLPREGNMEESAIRVGFVTYNKVLHFYNVKSSLAQPQMMVVSDVADMFVPLLDGFLVNVNESRTVITSLLDQIPEMFADTRETETVFAPVIQAGLEALKAAECAGKLFIFHTSLPIAEAPGKLKNRDDKKLINTDKEKTLFQPQTSFYNNLAKDCVAQGCCVDLFLFPNQYLDVATLGVVPYQTGGSIYKYAYFQLETDQDRFLNDLRRDVQKEVGFDAVMRVRTSTGIRATDFFGAFYMSNTTDVEMAGLDCDKTITVEFKHDDKLSEDSGALLQCALLYTSCAGQRRLRIHNLSLNCCTQLADLYRNCETDTLINYLAKYAYRGVLSSPVKAVRDALISQCAQILACYRKNCASPSSAGQLILPECMKLLPVYLNCVLKSDVLQPGPEVTTDDRAYIRQLVTSMDVAETNVFFYPRLLPLTKADVDSDSLPAAIRNSEERLCKGDIYLLENGLNIFVWVGVNVQQGLLQNLFGVSSFNQISNALNALPVLENPFSRKVRSIVDMLQVQRSRYMKLIIVKQEDKLEMLFKHFLVEDKSLNGGASYVDFLCHMHKEIRQLLS
SIO_010081: SEC24C
subclass of: SO_0000673
so part of: SEC24C
location: join(1301492..1301657,1304450..1304536,1305750..1305867,1306521..1306675,1307846..1308283,1309561..1309691,1310988..1311056,1312616..1312727,1313534..1313661,1315376..1315514,1317504..1317619,1317910..1318034,1318291..1318482,1319202..1319295,1320022..1320138,1320667..1320837,1321177..1321273,1321574..1321719,1322185..1322323,1322772..1322890,1323498..1323677,1324343..1324534,1324931..1325020,1325469..1325609)
location: region:1301492-1325609:1
so has part: feature:1301492-1301657:1:exon
so has part: feature:1304450-1304536:1:exon
so has part: feature:1305750-1305867:1:exon
so has part: feature:1306521-1306675:1:exon
so has part: feature:1307846-1308283:1:exon
so has part: feature:1309561-1309691:1:exon
so has part: feature:1310988-1311056:1:exon
so has part: feature:1312616-1312727:1:exon
so has part: feature:1313534-1313661:1:exon
so has part: feature:1315376-1315514:1:exon
so has part: feature:1317504-1317619:1:exon
so has part: feature:1317910-1318034:1:exon
so has part: feature:1318291-1318482:1:exon
so has part: feature:1319202-1319295:1:exon
so has part: feature:1320022-1320138:1:exon
so has part: feature:1320667-1320837:1:exon
so has part: feature:1321177-1321273:1:exon
so has part: feature:1321574-1321719:1:exon
so has part: feature:1322185-1322323:1:exon
so has part: feature:1322772-1322890:1:exon
so has part: feature:1323498-1323677:1:exon
so has part: feature:1324343-1324534:1:exon
so has part: feature:1324931-1325020:1:exon
so has part: feature:1325469-1325609:1:exon

XP_030308647.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1301492-1301657:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1304450-1304536:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1305750-1305867:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1306521-1306675:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1307846-1308283:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1309561-1309691:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1310988-1311056:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1312616-1312727:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1313534-1313661:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1315376-1315514:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1317504-1317619:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1317910-1318034:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1318291-1318482:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1319202-1319295:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1320022-1320138:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1320667-1320837:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1321177-1321273:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1321574-1321719:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1322185-1322323:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1322772-1322890:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1323498-1323677:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1324343-1324534:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1324931-1325020:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1325469-1325609:1:exon

SEC24C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SEC24C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein transport protein Sec24C isoform X2
translation: MSVNQQAHTGPPYGQPQPGYQGYQQPAYGGQPLPGEQYGAYNGPMPGYQQPGPPQGYFPSLGFPSKGSPVSINSDTSSLPPNFIGSLRAPPTTGAPPPASGAYNQFGHGDVQNGIPTSAAPVQRPPASQPFLPRSAPSQQYGPPPASVQQLTNHMAGMTIVSTTASAPPPAGLGYGPPTSAPPVSETFSAPYTPYTASPGPPPTTVFQGPPLAQPPFPAQPMSMQRPPTQVPGFAPPPPSTGLGPSPYPPPAGAPRPPPMPGPPLPGQSLAGPSASQPNHVSSPPPPSPMAGPHPGPPMGGLHGPPPPTHPPQPGYQIQQNGSFEQVRGPQPNYPGAYPGAPNYGSQPGAPPPPKRLDPDSIPSPIQVIEDDRNNRGSEPFVTGVRGQVPPLVTTNFLVKDQGNASPRYIRCTSYNIPCTSDMAKQSQVPLAAVIKPLATLPPEENLPYLVDHGESGPVRCNRCKAYMCPFMQFIEGGRRFQCCFCSCVTEVPPQYFQHLDHTGKRVDFYDRPELSLGSYEFLATVDYCKNNKFPSPPAFIFMIDVSYNAVKSGLVRLICEELKSLLDYLPREGNMEESAIRVGFVTYNKVLHFYNVKSSLAQPQMMVVSDVADMFVPLLDGFLVNVNESRTVITSLLDQIPEMFADTRETETVFAPVIQAGLEALKAAECAGKLFIFHTSLPIAEAPGKLKNRDDKKLINTDKEKTLFQPQTSFYNNLAKDCVAQGCCVDLFLFPNQYLDVATLGVVPYQTGGSIYKYAYFQLETDQDRFLNDLRRDVQKEVGFDAVMRVRTSTGIRATDFFGAFYMSNTTDVEMAGLDCDKTITVEFKHDDKLSEDSGALLQCALLYTSCAGQRRLRIHNLSLNCCTQLADLYRNCETDTLINYLAKYAYRGVLSSPVKAVRDALISQCAQILACYRKNCASPSSAGQLILPECMKLLPVYLNCVLKSDVLQPGPEVTTDDRAYIRQLVTSMDVAETNVFFYPRLLPLTKADVDSDSLPAAIRNSEERLCKGDIYLLENGLNIFVWVGVNVQQGLLQNLFGVSSFNQISNALNALPVLENPFSRKVRSIVDMLQVQRSRYMKLIIVKQEDKLEMLFKHFLVEDKSLNGGASYVDFLCHMHKEIRQLLS
SIO_010081: SEC24C
subclass of: SO_0000673
so part of: SEC24C
location: join(1301492..1301657,1304450..1304536,1305750..1305867,1306521..1306675,1307846..1308283,1309561..1309691,1312616..1312727,1313534..1313661,1315376..1315514,1317504..1317619,1317910..1318034,1318291..1318482,1319202..1319295,1320022..1320138,1320667..1320837,1321177..1321273,1321574..1321719,1322185..1322323,1322772..1322890,1323498..1323677,1324343..1324534,1324931..1325020,1325469..1325609)
location: region:1301492-1325609:1
so has part: feature:1301492-1301657:1:exon
so has part: feature:1304450-1304536:1:exon
so has part: feature:1305750-1305867:1:exon
so has part: feature:1306521-1306675:1:exon
so has part: feature:1307846-1308283:1:exon
so has part: feature:1309561-1309691:1:exon
so has part: feature:1312616-1312727:1:exon
so has part: feature:1313534-1313661:1:exon
so has part: feature:1315376-1315514:1:exon
so has part: feature:1317504-1317619:1:exon
so has part: feature:1317910-1318034:1:exon
so has part: feature:1318291-1318482:1:exon
so has part: feature:1319202-1319295:1:exon
so has part: feature:1320022-1320138:1:exon
so has part: feature:1320667-1320837:1:exon
so has part: feature:1321177-1321273:1:exon
so has part: feature:1321574-1321719:1:exon
so has part: feature:1322185-1322323:1:exon
so has part: feature:1322772-1322890:1:exon
so has part: feature:1323498-1323677:1:exon
so has part: feature:1324343-1324534:1:exon
so has part: feature:1324931-1325020:1:exon
so has part: feature:1325469-1325609:1:exon

XP_030308648.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1301492-1301657:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1304450-1304536:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1305750-1305867:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1306521-1306675:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1307846-1308283:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1309561-1309691:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1312616-1312727:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1313534-1313661:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1315376-1315514:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1317504-1317619:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1317910-1318034:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1318291-1318482:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1319202-1319295:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1320022-1320138:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1320667-1320837:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1321177-1321273:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1321574-1321719:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1322185-1322323:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1322772-1322890:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1323498-1323677:1:exon