Calypte anna isolate BGI_N300 chromosome 5, bCalAnn1_v1.p, whole genome shotgun sequence.
type: Entry
definition: Calypte anna isolate BGI_N300 chromosome 5, bCalAnn1_v1.p, whole genome shotgun sequence.
sequence version: NC_044250.1
sequence date: 2019-08-24
sequence: sequence
division: CON
label: NC_044250.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA558503
dblink: SAMN02265252
keyword: WGS
keyword: RefSeq
source: Calypte anna (Anna's hummingbird)
organism: Calypte anna
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Apodiformes; Trochilidae; Calypte.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM012118.1.\nAssembly name: bCalAnn1_v1.p\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2019/05/16. The original whole-genome shotgun project has the\naccession RRCD00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 26-SEP-2018\nAssembly Method :: FALCON v. 5.1.1; FALCON unzip v. 1.0.2;\n scaff10X v. git 4.28.2018; Bionano Solve\n DLS v. 3.2.1; Salsa2 HiC v. 2.0;\n smrtanalysis Arrow polishing & gap\n filling v. 5.1.0.26412; longranger align\n v. 2.2.2; freebayes v. 1.2.0;\n purge_haplotigs v. bit 7.10.2018; gEVAL\n manual curation v. 2018-09-07\nAssembly Name :: bCalAnn1_v1.p\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 54.0x\nSequencing Technology :: PacBio RSII; 10X Genomics linked reads;\n Bionano Genomics DLS; Arima Genomics HiC\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Calypte anna Annotation Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 16645885
topology: linear
so has quality: SO_0000987
location: 1..16645885
location: region:1-16645885:1
RO_0002162: 9244

NC_044250
type: RefSeq
SIO_000068: refseq

PRJNA558503
type: BioProject
SIO_000068: bioproject

SAMN02265252
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16645885:1
position: 16645885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16645885:1:source
so part of: sequence
organism: Calypte anna
mol type: genomic DNA
isolate: BGI_N300
chromosome: 5
sex: female
country: USA

9244
type: Taxonomy
SIO_000068: taxonomy

LOC103539517
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103539517
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(79..5413)
location: region:79-5413:-1
so has part: feature:79-5413:-1:exon
subclass of: SO_0000010

103539517
type: Gene
SIO_000068: ncbigene

position:79:-1
position: 79
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5413:-1
position: 5413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79-5413:-1:exon

LOC103539517
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103539517
product: E3 ubiquitin-protein ligase DTX4
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030451245.1
SIO_010081: LOC103539517
subclass of: SO_0000673
so part of: LOC103539517
location: complement(join(79..263,414..475,1298..2020,5118..5413))
location: region:79-5413:-1
so has part: feature:5118-5413:-1:exon
so has part: feature:1298-2020:-1:exon
so has part: feature:414-475:-1:exon
so has part: feature:79-263:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5118-5413:-1:exon

position:5118:-1
position: 5118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1298-2020:-1:exon

position:1298:-1
position: 1298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2020:-1
position: 2020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:414-475:-1:exon

position:414:-1
position: 414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475:-1
position: 475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:79-263:-1:exon

position:263:-1
position: 263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103539517
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103539517
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase DTX4
translation: MLLASAVVVWEWLNEHGRWRPYSPAVSHHIEAVARAGPRAGGSVVLGQADSRLAPYIIDLQSMHQFRQDTGTIRPVRRSYYDHXSAPGKGVVWEWENDSGSWTPYDMDVGITIQRAYEKQHPWVDLSAIGFCYIIDFATMGQINRQTQRKRRVRRRLDMVYPLVSGTLPKSQSWPTSPGPAPAPPVSACACPQCLLVMSVKATVSAAGPGTATLQPRKVLPVPPAASKAPALAPGAKASDSAAVARGSLKPLAAQGGWQQAASTPALSLSSSTASPLGAGSGKASRPGLGTLNRNHLQRLAIAQSRVLIASGVPTIPVKNLTGSSPVNPALAGITGILMSAAGLPVCLTRPPKLVLHPPPVSKSEIESIPGISHTCRKTTKKQAKKGERQIAT
SIO_010081: LOC103539517
subclass of: SO_0000673
so part of: LOC103539517
location: complement(join(79..263,414..475,1298..2020,5118..5328))
location: region:79-5328:-1
so has part: feature:5118-5328:-1:exon
so has part: feature:1298-2020:-1:exon
so has part: feature:414-475:-1:exon
so has part: feature:79-263:-1:exon

XP_030307105.1
type: Protein
SIO_000068: ncbiprotein

position:5328:-1
position: 5328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5118-5328:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1298-2020:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:414-475:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:79-263:-1:exon

CNTF
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: CNTF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9635..16591)
location: region:9635-16591:-1
so has part: feature:9635-16591:-1:exon
subclass of: SO_0000010

103539519
type: Gene
SIO_000068: ncbigene

position:9635:-1
position: 9635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16591:-1
position: 16591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9635-16591:-1:exon

CNTF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CNTF
product: ciliary neurotrophic factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030450984.1
SIO_010081: CNTF
subclass of: SO_0000673
so part of: CNTF
location: complement(join(9635..10656,10977..11266,14009..15492,15874..15973,16483..16591))
location: region:9635-16591:-1
so has part: feature:16483-16591:-1:exon
so has part: feature:15874-15973:-1:exon
so has part: feature:14009-15492:-1:exon
so has part: feature:10977-11266:-1:exon
so has part: feature:9635-10656:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16483-16591:-1:exon

position:16483:-1
position: 16483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15874-15973:-1:exon

position:15874:-1
position: 15874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15973:-1
position: 15973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14009-15492:-1:exon

position:14009:-1
position: 14009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15492:-1
position: 15492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10977-11266:-1:exon

position:10977:-1
position: 10977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11266:-1
position: 11266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9635-10656:-1:exon

position:10656:-1
position: 10656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CNTF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CNTF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ciliary neurotrophic factor
translation: MAAAGSPSAALRCRDLCSRGIRLAGKMRSDVIDLLDTYVEQQGLDASASVAAVEGVPLAAVERWDELTGTQRLLENLAAYRAFRALLAQMLEEQQEQLGEADATLGRALTAVLLQVSAFIYHLEELLRLESRGPPREEGTGPPPASHLGLFERKLRGLGVLRELAQWAVRSARDLRQLSRTSPVSSSAPSPADSP
SIO_010081: CNTF
subclass of: SO_0000673
so part of: CNTF
location: complement(join(10183..10656,10977..11090))
location: region:10183-11090:-1
so has part: feature:10977-11090:-1:exon
so has part: feature:10183-10656:-1:exon

XP_030306844.1
type: Protein
SIO_000068: ncbiprotein

position:10183:-1
position: 10183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11090:-1
position: 11090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10977-11090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10183-10656:-1:exon

LOC103539520
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103539520
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 32663..35624
location: region:32663-35624:1
so has part: feature:32663-35624:1:exon
subclass of: SO_0000010

103539520
type: Gene
SIO_000068: ncbigene

position:32663:1
position: 32663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35624:1
position: 35624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32663-35624:1:exon

LOC103539520
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103539520
product: leupaxin
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_030451508.1
SIO_010081: LOC103539520
subclass of: SO_0000673
so part of: LOC103539520
location: join(32663..32675,33479..33627,34109..34183,34350..34418,34485..34644,34713..34826,34929..35079,35162..35624)
location: region:32663-35624:1
so has part: feature:32663-32675:1:exon
so has part: feature:33479-33627:1:exon
so has part: feature:34109-34183:1:exon
so has part: feature:34350-34418:1:exon
so has part: feature:34485-34644:1:exon
so has part: feature:34713-34826:1:exon
so has part: feature:34929-35079:1:exon
so has part: feature:35162-35624:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32663-32675:1:exon

position:32675:1
position: 32675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:33479-33627:1:exon

position:33479:1
position: 33479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33627:1
position: 33627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:34109-34183:1:exon

position:34109:1
position: 34109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34183:1
position: 34183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:34350-34418:1:exon

position:34350:1
position: 34350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34418:1
position: 34418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:34485-34644:1:exon

position:34485:1
position: 34485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34644:1
position: 34644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:34713-34826:1:exon

position:34713:1
position: 34713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34826:1
position: 34826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:34929-35079:1:exon

position:34929:1
position: 34929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35079:1
position: 35079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:35162-35624:1:exon

position:35162:1
position: 35162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC103539520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103539520
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:34945..34947,aa:OTHER)
product: LOW QUALITY PROTEIN: leupaxin
translation: MDDLDALLAELEQSSCPASKDCEVQALSSCKQDPATAVFPAPHGYKPLALTALKPLPPFPPLTAATQQVLEDLGHMQSKELGITVTTPTGICTTCHKPSACKVLTALGITWHPEHFTCTYCRRKLGGQPFFEWGGWAFCEDYHQEFSPCAYCAGPILHRVLMALGQTWHPXNFFCAHCRKVFGDESKSQRNTVGGGKPSXHWEFLDMFAPKCQGCKCPVINNYLSALQGVWHPKCFMCAVSGHGLAGGSFFELEGRPYPKLHFHQQQGSICHSHSCVTVAGRKYHPEHFICTYCPCQLQKGTFQAXSNKMYCQACHDKLFLRLLALLYTVSLSAWLGVPSTVHPINIPHSNVTGTGPNVPGIVTAKPDIASISCPPALKTFLALSLPSPGYCPPHPKQ
SIO_010081: LOC103539520
subclass of: SO_0000673
so part of: LOC103539520
location: join(32663..32675,33479..33627,34109..34183,34350..34418,34485..34644,34713..34826,34929..35079,35162..35624)
location: region:32663-35624:1
so has part: feature:32663-32675:1:exon
so has part: feature:33479-33627:1:exon
so has part: feature:34109-34183:1:exon
so has part: feature:34350-34418:1:exon
so has part: feature:34485-34644:1:exon
so has part: feature:34713-34826:1:exon
so has part: feature:34929-35079:1:exon
so has part: feature:35162-35624:1:exon

XP_030307368.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32663-32675:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33479-33627:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:34109-34183:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:34350-34418:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:34485-34644:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:34713-34826:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:34929-35079:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:35162-35624:1:exon

CTNND1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: CTNND1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(38479..64705)
location: region:38479-64705:-1
so has part: feature:38479-64705:-1:exon
subclass of: SO_0000010

103539521
type: Gene
SIO_000068: ncbigene

position:38479:-1
position: 38479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64705:-1
position: 64705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38479-64705:-1:exon

CTNND1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CTNND1
product: catenin delta 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 12 bases in 10 codons; deleted 10 bases in 8 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030450967.1
SIO_010081: CTNND1
subclass of: SO_0000673
so part of: CTNND1
location: complement(join(38479..38647,38801..38898,39025..39072,39367..39454,40007..40121,40225..40416,40524..40673,41208..41335,42233..42301,42561..42578,42965..43115,43685..43802,44089..44270,44368..44823,47641..48178,48393..48553,48806..48883,49962..50280,51070..51188,64624..64705))
location: region:38479-64705:-1
so has part: feature:64624-64705:-1:exon
so has part: feature:51070-51188:-1:exon
so has part: feature:49962-50280:-1:exon
so has part: feature:48806-48883:-1:exon
so has part: feature:48393-48553:-1:exon
so has part: feature:47641-48178:-1:exon
so has part: feature:44368-44823:-1:exon
so has part: feature:44089-44270:-1:exon
so has part: feature:43685-43802:-1:exon
so has part: feature:42965-43115:-1:exon
so has part: feature:42561-42578:-1:exon
so has part: feature:42233-42301:-1:exon
so has part: feature:41208-41335:-1:exon
so has part: feature:40524-40673:-1:exon
so has part: feature:40225-40416:-1:exon
so has part: feature:40007-40121:-1:exon
so has part: feature:39367-39454:-1:exon
so has part: feature:39025-39072:-1:exon
so has part: feature:38801-38898:-1:exon
so has part: feature:38479-38647:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64624-64705:-1:exon

position:64624:-1
position: 64624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:51070-51188:-1:exon

position:51070:-1
position: 51070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51188:-1
position: 51188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:49962-50280:-1:exon

position:49962:-1
position: 49962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50280:-1
position: 50280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:48806-48883:-1:exon

position:48806:-1
position: 48806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48883:-1
position: 48883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:48393-48553:-1:exon

position:48393:-1
position: 48393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48553:-1
position: 48553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:47641-48178:-1:exon

position:47641:-1
position: 47641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48178:-1
position: 48178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:44368-44823:-1:exon

position:44368:-1
position: 44368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44823:-1
position: 44823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:44089-44270:-1:exon

position:44089:-1
position: 44089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44270:-1
position: 44270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:43685-43802:-1:exon

position:43685:-1
position: 43685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43802:-1
position: 43802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:42965-43115:-1:exon

position:42965:-1
position: 42965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43115:-1
position: 43115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:42561-42578:-1:exon

position:42561:-1
position: 42561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42578:-1
position: 42578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:42233-42301:-1:exon

position:42233:-1
position: 42233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42301:-1
position: 42301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:41208-41335:-1:exon

position:41208:-1
position: 41208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41335:-1
position: 41335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:40524-40673:-1:exon

position:40524:-1
position: 40524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40673:-1
position: 40673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:40225-40416:-1:exon

position:40225:-1
position: 40225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40416:-1
position: 40416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:40007-40121:-1:exon

position:40007:-1
position: 40007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40121:-1
position: 40121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:39367-39454:-1:exon

position:39367:-1
position: 39367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39454:-1
position: 39454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:39025-39072:-1:exon

position:39025:-1
position: 39025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39072:-1
position: 39072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:38801-38898:-1:exon

position:38801:-1
position: 38801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38898:-1
position: 38898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:38479-38647:-1:exon

position:38647:-1
position: 38647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CTNND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CTNND1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 12 bases in 10 codons; deleted 10 bases in 8 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(47969..47971),aa:OTHER)
product: LOW QUALITY PROTEIN: catenin delta-1
translation: MDDSEVESTASILASVKEQEAQFEXLTRALEEERRHVSAQLERVRVSHRTPARAWANGTLTRRHQNGRFLGDADLERQKYQDLKLNGPQVRDHSHLLYGTIPRMQDPGQIVEETYTMEEDPEGAMSVVSVETSDDGTTRRTETTVKKVVKTVTTRTVQQVPVGPDGLPLETSPITSNYVQTMDRNFRKNGNGGPGGYLSQPSTATLPRNYQLPXRLMAAPYEDGYPGSDHSYGSLSRVTRIDERYRPSMDTYRAPAAKTSMGPQPQVRVGGSNMDLNHFHPEPYGLEDDQRSVGFEDVDYGLMSDYARPGGRTPSDPRRRLRYYEDMLVDEVAPDRVLLGNLWPQHERGXLASLDSLRREATPGNWRQPELPEVITMLSFRLEAVKSNAAAYLQHLCYRNDKVKQSAQAXKGIPVLVGLLDHPRKXVHYGACGALKNISFGKDQDNKIAIKNCDGXPALVRLXRKAHDMDXTEVITGTLWNLSSHDSIKMAIVDHALHALTDEVVIPLWGREPNEDSKPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIYIVQSEIGQKDSDSKLWRTVCMRNLSYQVHREIPHAERYQRHLWPLQQRWAHVRVASCQEGKGGLDEWFSRGKKLPEDPGADTVDFPKRTIPAKGYELLFQPEVVRIYISLLKESKTPAILEASAGAIQNLCAGSWTYGRYIRSALRQEKGLSXIADLLTHDSERVVKAASGALRNLAVDLRNKELIGKHAXPNLVKKLPGGQQTPTKNLSEDTVVSILNTINEVIVDNLEAAKKLRETQGIEKLVLINKSGNRSEREVRAAALVLQTVWGYKELRKPLEKEGWKKSDFQVNLSSASRTQGGNSFDDSTLPLIDRNQKTDKKSSREEIQMSNMGPDNYSTLNERDHSRPLDRSGDLGDMEPVKAAPLMQEEGQELHPVVEXEEDAAIFSPVLVCRTVSCPV
SIO_010081: CTNND1
subclass of: SO_0000673
so part of: CTNND1
location: complement(join(38548..38647,38801..38898,39025..39072,39367..39454,40007..40121,40225..40416,40524..40673,41208..41335,42233..42301,42561..42578,42965..43115,43685..43802,44089..44270,44368..44823,47641..48178,48393..48553,48806..48883,49962..50155))
location: region:38548-50155:-1
so has part: feature:49962-50155:-1:exon
so has part: feature:48806-48883:-1:exon
so has part: feature:48393-48553:-1:exon
so has part: feature:47641-48178:-1:exon
so has part: feature:44368-44823:-1:exon
so has part: feature:44089-44270:-1:exon
so has part: feature:43685-43802:-1:exon
so has part: feature:42965-43115:-1:exon
so has part: feature:42561-42578:-1:exon
so has part: feature:42233-42301:-1:exon
so has part: feature:41208-41335:-1:exon
so has part: feature:40524-40673:-1:exon
so has part: feature:40225-40416:-1:exon
so has part: feature:40007-40121:-1:exon
so has part: feature:39367-39454:-1:exon
so has part: feature:39025-39072:-1:exon
so has part: feature:38801-38898:-1:exon
so has part: feature:38548-38647:-1:exon

XP_030306827.1
type: Protein
SIO_000068: ncbiprotein

position:38548:-1
position: 38548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50155:-1
position: 50155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49962-50155:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:48806-48883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48393-48553:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:47641-48178:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44368-44823:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44089-44270:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43685-43802:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:42965-43115:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:42561-42578:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:42233-42301:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:41208-41335:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:40524-40673:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:40225-40416:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:40007-40121:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:39367-39454:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:39025-39072:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:38801-38898:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:38548-38647:-1:exon

BTBD18
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: BTBD18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 70259..72754
location: region:70259-72754:1
so has part: feature:70259-72754:1:exon
subclass of: SO_0000010

115598387
type: Gene
SIO_000068: ncbigene

position:70259:1
position: 70259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72754:1
position: 72754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70259-72754:1:exon

BTBD18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: BTBD18
product: BTB domain containing 18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030451283.1
SIO_010081: BTBD18
subclass of: SO_0000673
so part of: BTBD18
location: join(70259..71267,71664..71800,71885..72754)
location: region:70259-72754:1
so has part: feature:70259-71267:1:exon
so has part: feature:71664-71800:1:exon
so has part: feature:71885-72754:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:70259-71267:1:exon

position:71267:1
position: 71267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:71664-71800:1:exon

position:71664:1
position: 71664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71800:1
position: 71800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:71885-72754:1:exon

position:71885:1
position: 71885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BTBD18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: BTBD18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein 18
translation: MGSPTATPRLLYRSTRLLRTAFQQLHQQQQRADVFCDVVLQAEGEAVAAHCSVLSVCSPFFMEQLGRELPPRGGRVVLDLGELKIGVLRKLVRFLYTAELEATREEVQEVLAAARLLRVTELESLQLRGGRLVRPGPPRQLDRSCLQAPRQGFPRAVGSKAEPSSASIPPRSTDVPFGTTSITPRVRPGSPGTAQPGPVGRVKLRKVESGECWEVVRERHWQPPTALPVSEVGVVEPQPPRDVGAPGRVGRRSPPRKKQGQVLPIPHQGCMQAVPPGVPPSDPQEEEVDVGTAEPCLPPSTFCVWPCPSSESDQEVDVLA
SIO_010081: BTBD18
subclass of: SO_0000673
so part of: BTBD18
location: join(71671..71800,71885..72717)
location: region:71671-72717:1
so has part: feature:71671-71800:1:exon
so has part: feature:71885-72717:1:exon

XP_030307143.1
type: Protein
SIO_000068: ncbiprotein

position:71671:1
position: 71671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72717:1
position: 72717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71671-71800:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:71885-72717:1:exon

SELENOH
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SELENOH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(73008..74089)
location: region:73008-74089:-1
so has part: feature:73008-74089:-1:exon
subclass of: SO_0000010

103539485
type: Gene
SIO_000068: ncbigene

position:73008:-1
position: 73008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74089:-1
position: 74089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73008-74089:-1:exon

SELENOH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SELENOH
product: selenoprotein H
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030451285.1
SIO_010081: SELENOH
subclass of: SO_0000673
so part of: SELENOH
location: complement(join(73008..73198,73285..73430,73514..74089))
location: region:73008-74089:-1
so has part: feature:73514-74089:-1:exon
so has part: feature:73285-73430:-1:exon
so has part: feature:73008-73198:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:73514-74089:-1:exon

position:73514:-1
position: 73514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:73285-73430:-1:exon

position:73285:-1
position: 73285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73430:-1
position: 73430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:73008-73198:-1:exon

position:73198:-1
position: 73198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SELENOH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SELENOH
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(73421..73423),aa:Sec)
product: LOW QUALITY PROTEIN: selenoprotein H
translation: MASRRRKRGPPQPPADEDPEQAGTPQKRTRAQGEASPEVSGPRVVIEHCKSURVFGRNAAAVSEALRGALSHLPVDINPRPPRRNSFEVSLVKEDGSTVELWSGIAKGPPRKLKFPQPEAVVEALKSSLA
SIO_010081: SELENOH
subclass of: SO_0000673
so part of: SELENOH
location: complement(join(73097..73198,73285..73430,73514..73659))
location: region:73097-73659:-1
so has part: feature:73514-73659:-1:exon
so has part: feature:73285-73430:-1:exon
so has part: feature:73097-73198:-1:exon

XP_030307145.1
type: Protein
SIO_000068: ncbiprotein

position:73097:-1
position: 73097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73659:-1
position: 73659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73514-73659:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:73285-73430:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:73097-73198:-1:exon

TMX2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: TMX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(74207..76379)
location: region:74207-76379:-1
so has part: feature:74207-76379:-1:exon
subclass of: SO_0000010

103539486
type: Gene
SIO_000068: ncbigene

position:74207:-1
position: 74207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76379:-1
position: 76379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74207-76379:-1:exon

TMX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TMX2
product: thioredoxin related transmembrane protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 1 long SRA read, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_008505994.2
SIO_010081: TMX2
subclass of: SO_0000673
so part of: TMX2
location: complement(join(74207..74464,74586..74715,74805..74870,74947..75053,75128..75204,75341..75454,75643..75703,76163..76379))
location: region:74207-76379:-1
so has part: feature:76163-76379:-1:exon
so has part: feature:75643-75703:-1:exon
so has part: feature:75341-75454:-1:exon
so has part: feature:75128-75204:-1:exon
so has part: feature:74947-75053:-1:exon
so has part: feature:74805-74870:-1:exon
so has part: feature:74586-74715:-1:exon
so has part: feature:74207-74464:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:76163-76379:-1:exon

position:76163:-1
position: 76163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:75643-75703:-1:exon

position:75643:-1
position: 75643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75703:-1
position: 75703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:75341-75454:-1:exon

position:75341:-1
position: 75341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75454:-1
position: 75454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:75128-75204:-1:exon

position:75128:-1
position: 75128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75204:-1
position: 75204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:74947-75053:-1:exon

position:74947:-1
position: 74947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75053:-1
position: 75053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:74805-74870:-1:exon

position:74805:-1
position: 74805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74870:-1
position: 74870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:74586-74715:-1:exon

position:74586:-1
position: 74586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74715:-1
position: 74715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:74207-74464:-1:exon

position:74464:-1
position: 74464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TMX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin-related transmembrane protein 2
translation: MAVLAPLLALLYSVPGLVRWLARPYYPLSALLATAFLLVRKVPPLCHGLPSQREDGNPCDFDWREVEILMFLSAIVMMKNRRSITVEQHIGNIFMFSKVANAILFFRLDIRMGLLYLTLCIVFLMTCKPPLYMGPEYIKYFSDKTIDEELERDKRVTWIVEFFANWSNECQSFAPIFADLSLKYNCVGLHFGKVDVGRYTDVSTRYKVSTSPLTKQLPTLILFQGGTETMRRPQIDKKGRAVSWTFSEENVIREFNLNELYQKAKKQSKSREEGPEEPPGVQAPTGETKKDK
SIO_010081: TMX2
subclass of: SO_0000673
so part of: TMX2
location: complement(join(74330..74464,74586..74715,74805..74870,74947..75053,75128..75204,75341..75454,75643..75703,76163..76351))
location: region:74330-76351:-1
so has part: feature:76163-76351:-1:exon
so has part: feature:75643-75703:-1:exon
so has part: feature:75341-75454:-1:exon
so has part: feature:75128-75204:-1:exon
so has part: feature:74947-75053:-1:exon
so has part: feature:74805-74870:-1:exon
so has part: feature:74586-74715:-1:exon
so has part: feature:74330-74464:-1:exon

XP_008504216.2
type: Protein
SIO_000068: ncbiprotein

position:74330:-1
position: 74330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76351:-1
position: 76351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76163-76351:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:75643-75703:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:75341-75454:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:75128-75204:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:74947-75053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:74805-74870:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:74586-74715:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:74330-74464:-1:exon

MED19
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: MED19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 76578..78709
location: region:76578-78709:1
so has part: feature:76578-78709:1:exon
subclass of: SO_0000010

103539523
type: Gene
SIO_000068: ncbigene

position:76578:1
position: 76578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78709:1
position: 78709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76578-78709:1:exon

MED19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MED19
product: mediator complex subunit 19
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030450973.1
SIO_010081: MED19
subclass of: SO_0000673
so part of: MED19
location: join(76578..76818,77285..77541,77627..77723,77814..77908,78029..78709)
location: region:76578-78709:1
so has part: feature:76578-76818:1:exon
so has part: feature:77285-77541:1:exon
so has part: feature:77627-77723:1:exon
so has part: feature:77814-77908:1:exon
so has part: feature:78029-78709:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:76578-76818:1:exon

position:76818:1
position: 76818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:77285-77541:1:exon

position:77285:1
position: 77285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77541:1
position: 77541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:77627-77723:1:exon

position:77627:1
position: 77627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77723:1
position: 77723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:77814-77908:1:exon

position:77814:1
position: 77814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77908:1
position: 77908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:78029-78709:1:exon

position:78029:1
position: 78029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MED19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MED19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 19
translation: MENFSALFGGAEAPPTAAAAAAAALGFGPAKAPGAGAAPPPAVTAPPPGEDAVRKAAVGPFYLLRELPGTTELTGSTNLITHYNLEHAYNKFCGKKVKEKLSNFLPDLPGMIDLPGSHDNSSLRSLIEKPPICGSSFTPLTGTMLTGFRLHAGPLPEQCRLMHIQPPKKKNKHKHKQSRTQDPVPPETPSDSDHKKKKKKKEEDPERKRKKKEKKKKKNRHSPEHPGVGGSQASSSSLR
SIO_010081: MED19
subclass of: SO_0000673
so part of: MED19
location: join(76614..76818,77285..77541,77627..77723,77814..77908,78029..78094)
location: region:76614-78094:1
so has part: feature:76614-76818:1:exon
so has part: feature:77285-77541:1:exon
so has part: feature:77627-77723:1:exon
so has part: feature:77814-77908:1:exon
so has part: feature:78029-78094:1:exon

XP_030306833.1
type: Protein
SIO_000068: ncbiprotein

position:76614:1
position: 76614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78094:1
position: 78094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76614-76818:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:77285-77541:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:77627-77723:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:77814-77908:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:78029-78094:1:exon

ZDHHC5
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ZDHHC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(78631..89516)
location: region:78631-89516:-1
so has part: feature:78631-89516:-1:exon
subclass of: SO_0000010

103539524
type: Gene
SIO_000068: ncbigene

position:78631:-1
position: 78631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89516:-1
position: 89516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78631-89516:-1:exon

ZDHHC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ZDHHC5
product: zinc finger DHHC-type containing 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030450971.1
SIO_010081: ZDHHC5
subclass of: SO_0000673
so part of: ZDHHC5
location: complement(join(78631..78698,80191..80350,80701..81566,81688..81800,82534..82657,83071..83203,83326..83417,83800..83902,84010..84182,84262..84419,84735..84856,88378..89516))
location: region:78631-89516:-1
so has part: feature:88378-89516:-1:exon
so has part: feature:84735-84856:-1:exon
so has part: feature:84262-84419:-1:exon
so has part: feature:84010-84182:-1:exon
so has part: feature:83800-83902:-1:exon
so has part: feature:83326-83417:-1:exon
so has part: feature:83071-83203:-1:exon
so has part: feature:82534-82657:-1:exon
so has part: feature:81688-81800:-1:exon
so has part: feature:80701-81566:-1:exon
so has part: feature:80191-80350:-1:exon
so has part: feature:78631-78698:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:88378-89516:-1:exon

position:88378:-1
position: 88378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:84735-84856:-1:exon

position:84735:-1
position: 84735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84856:-1
position: 84856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:84262-84419:-1:exon

position:84262:-1
position: 84262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84419:-1
position: 84419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:84010-84182:-1:exon

position:84010:-1
position: 84010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84182:-1
position: 84182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:83800-83902:-1:exon

position:83800:-1
position: 83800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83902:-1
position: 83902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:83326-83417:-1:exon

position:83326:-1
position: 83326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83417:-1
position: 83417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:83071-83203:-1:exon

position:83071:-1
position: 83071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83203:-1
position: 83203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:82534-82657:-1:exon

position:82534:-1
position: 82534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82657:-1
position: 82657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:81688-81800:-1:exon

position:81688:-1
position: 81688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81800:-1
position: 81800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:80701-81566:-1:exon

position:80701:-1
position: 80701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81566:-1
position: 81566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:80191-80350:-1:exon

position:80191:-1
position: 80191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80350:-1
position: 80350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:78631-78698:-1:exon

position:78698:-1
position: 78698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZDHHC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ZDHHC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC5 isoform X1
translation: MPAASGKRFKPSKYVPVSAAAIFLVGATTLFFAFTCPGLSLYVSPVIPAYNAVVFLFVLANFSMATFMDPGIFPRAEEDEDKEDDFRAPLYKTVEIKGIQVRMKWCATCRFYRPPRCSHCSVCDNCVEEFDHHCPWVNNCIGRRNYRYFFLFLLSLTTHIMGVFGFGLLYVLYQVEELSGVRMAVTMVVMCVAGLFFIPVAGLTGFHVVLVARGRTTNEQVTGKFRGGVNPFTNGCCKNVSRVLCSSPAPRYLGRPRAEQTVLVRPPFLRPEVSDGQITVKIMDNGIQTELKRTKSKGSLEVTESQSADAEPPPPPKPDLSRYTGLRTHLTLATNEDSSLLGKDSPPTPTMYKYRPGYSSSSSSAALPHSTSAKLSRVNSLKEPNSICEGSHKPSYRSEPSLEPESFRSPTFGKSFPFDPLSSGSRSSSLKSAQGTGFELGQLQSIRSEGTTSTSYKSLVNQTRNGSLSYDSLLTPSDSPDFESVQAAPEPDPPVGYTSPFLSARIAQQRETDLHNRFAGPPKPAPREPSPVRYDNLSRHIVASIQEREKLLQQPAGQEEDAGLGDSGIQSTPGSSNAPRTSSSSDDSKRSPLGKNPLTRPAPPRFGKPEPPQALRVRSLGSPEPPTTPNLGKSVSYSSQKTASPASVPEVEEVALQPLLAPKDEVQMRTTYSKSNGQPRSLGSAPPGVGQVPLGSPTRGGVKKVSGVGGTTYEISVWGWCHRNW
SIO_010081: ZDHHC5
subclass of: SO_0000673
so part of: ZDHHC5
location: complement(join(78669..78698,80191..80350,80701..81566,81688..81800,82534..82657,83071..83203,83326..83417,83800..83902,84010..84182,84262..84419,84735..84856,88378..88481))
location: region:78669-88481:-1
so has part: feature:88378-88481:-1:exon
so has part: feature:84735-84856:-1:exon
so has part: feature:84262-84419:-1:exon
so has part: feature:84010-84182:-1:exon
so has part: feature:83800-83902:-1:exon
so has part: feature:83326-83417:-1:exon
so has part: feature:83071-83203:-1:exon
so has part: feature:82534-82657:-1:exon
so has part: feature:81688-81800:-1:exon
so has part: feature:80701-81566:-1:exon
so has part: feature:80191-80350:-1:exon
so has part: feature:78669-78698:-1:exon

XP_030306831.1
type: Protein
SIO_000068: ncbiprotein

position:78669:-1
position: 78669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88481:-1
position: 88481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88378-88481:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:84735-84856:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84262-84419:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:84010-84182:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83800-83902:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83326-83417:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:83071-83203:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:82534-82657:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:81688-81800:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:80701-81566:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:80191-80350:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:78669-78698:-1:exon

ZDHHC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ZDHHC5
product: zinc finger DHHC-type containing 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 long SRA read, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_008506033.2
SIO_010081: ZDHHC5
subclass of: SO_0000673
so part of: ZDHHC5
location: complement(join(78906..80350,80701..81566,81688..81800,82534..82657,83071..83203,83326..83417,83800..83902,84010..84182,84262..84419,84735..84856,88378..89516))
location: region:78906-89516:-1
so has part: feature:88378-89516:-1:exon
so has part: feature:84735-84856:-1:exon
so has part: feature:84262-84419:-1:exon
so has part: feature:84010-84182:-1:exon
so has part: feature:83800-83902:-1:exon
so has part: feature:83326-83417:-1:exon
so has part: feature:83071-83203:-1:exon
so has part: feature:82534-82657:-1:exon
so has part: feature:81688-81800:-1:exon
so has part: feature:80701-81566:-1:exon
so has part: feature:78906-80350:-1:exon

position:78906:-1
position: 78906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88378-89516:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:84735-84856:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84262-84419:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:84010-84182:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83800-83902:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83326-83417:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:83071-83203:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:82534-82657:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:81688-81800:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:80701-81566:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:78906-80350:-1:exon

ZDHHC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ZDHHC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC5 isoform X2
translation: MPAASGKRFKPSKYVPVSAAAIFLVGATTLFFAFTCPGLSLYVSPVIPAYNAVVFLFVLANFSMATFMDPGIFPRAEEDEDKEDDFRAPLYKTVEIKGIQVRMKWCATCRFYRPPRCSHCSVCDNCVEEFDHHCPWVNNCIGRRNYRYFFLFLLSLTTHIMGVFGFGLLYVLYQVEELSGVRMAVTMVVMCVAGLFFIPVAGLTGFHVVLVARGRTTNEQVTGKFRGGVNPFTNGCCKNVSRVLCSSPAPRYLGRPRAEQTVLVRPPFLRPEVSDGQITVKIMDNGIQTELKRTKSKGSLEVTESQSADAEPPPPPKPDLSRYTGLRTHLTLATNEDSSLLGKDSPPTPTMYKYRPGYSSSSSSAALPHSTSAKLSRVNSLKEPNSICEGSHKPSYRSEPSLEPESFRSPTFGKSFPFDPLSSGSRSSSLKSAQGTGFELGQLQSIRSEGTTSTSYKSLVNQTRNGSLSYDSLLTPSDSPDFESVQAAPEPDPPVGYTSPFLSARIAQQRETDLHNRFAGPPKPAPREPSPVRYDNLSRHIVASIQEREKLLQQPAGQEEDAGLGDSGIQSTPGSSNAPRTSSSSDDSKRSPLGKNPLTRPAPPRFGKPEPPQALRVRSLGSPEPPTTPNLGKSVSYSSQKTASPASVPEVEEVALQPLLAPKDEVQMRTTYSKSNGQPRSLGSAPPGVGQVPLGSPTRGGVKKVSGVGGTTYEISV
SIO_010081: ZDHHC5
subclass of: SO_0000673
so part of: ZDHHC5
location: complement(join(80185..80350,80701..81566,81688..81800,82534..82657,83071..83203,83326..83417,83800..83902,84010..84182,84262..84419,84735..84856,88378..88481))
location: region:80185-88481:-1
so has part: feature:88378-88481:-1:exon
so has part: feature:84735-84856:-1:exon
so has part: feature:84262-84419:-1:exon
so has part: feature:84010-84182:-1:exon
so has part: feature:83800-83902:-1:exon
so has part: feature:83326-83417:-1:exon
so has part: feature:83071-83203:-1:exon
so has part: feature:82534-82657:-1:exon
so has part: feature:81688-81800:-1:exon
so has part: feature:80701-81566:-1:exon
so has part: feature:80185-80350:-1:exon

XP_008504255.2
type: Protein
SIO_000068: ncbiprotein

position:80185:-1
position: 80185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88378-88481:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:84735-84856:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84262-84419:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:84010-84182:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83800-83902:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83326-83417:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:83071-83203:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:82534-82657:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:81688-81800:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:80701-81566:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:80185-80350:-1:exon

LOC115598371
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115598371
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(89573..93353)
location: region:89573-93353:-1
so has part: feature:89573-93353:-1:exon
subclass of: SO_0000011

115598371
type: Gene
SIO_000068: ncbigene

position:89573:-1
position: 89573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93353:-1
position: 93353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89573-93353:-1:exon

LOC115598371
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115598371
product: uncharacterized LOC115598371
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003987602.1
SIO_010081: LOC115598371
subclass of: SO_0000673
so part of: LOC115598371
location: complement(join(89573..89626,90019..90111,93302..93353))
location: region:89573-93353:-1
so has part: feature:93302-93353:-1:exon
so has part: feature:90019-90111:-1:exon
so has part: feature:89573-89626:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:93302-93353:-1:exon

position:93302:-1
position: 93302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:90019-90111:-1:exon

position:90019:-1
position: 90019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90111:-1
position: 90111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:89573-89626:-1:exon

position:89626:-1
position: 89626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CLP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: CLP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(93743..96187)
location: region:93743-96187:-1
so has part: feature:93743-96187:-1:exon
subclass of: SO_0000010

103539487
type: Gene
SIO_000068: ncbigene

position:93743:-1
position: 93743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96187:-1
position: 96187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93743-96187:-1:exon

CLP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CLP1
product: cleavage and polyadenylation factor I subunit 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 9 ESTs, 1 long SRA read, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030451460.1
SIO_010081: CLP1
subclass of: SO_0000673
so part of: CLP1
location: complement(join(93743..94553,95339..95964,96148..96187))
location: region:93743-96187:-1
so has part: feature:96148-96187:-1:exon
so has part: feature:95339-95964:-1:exon
so has part: feature:93743-94553:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:96148-96187:-1:exon

position:96148:-1
position: 96148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:95339-95964:-1:exon

position:95339:-1
position: 95339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95964:-1
position: 95964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:93743-94553:-1:exon

position:94553:-1
position: 94553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CLP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CLP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyribonucleotide 5'-hydroxyl-kinase Clp1
translation: MAEDGGEEKKQVAKFELERETELRFEVEASQMVQLELLTGMAEVFGTELTRNKKFTFDAGAKVAVFTWHGCTVQLSGRTEVAYISKDTPMLLYLNTHTALEQMRRQAEREDERGPRVMVVGPTDVGKSTVCRLLLNYAVRLGRRPTFVELDVGQGSVSIPGTMGALYIERPADVEEGFSLQAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDDRIREYFYGFRGCFYPHAFDVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRDMVHHLLSLSTADSPDDNISETSVAGFIVVTGVDLERQVFTVLSPAPRPLPKSFLLIMDIRFMDLK
SIO_010081: CLP1
subclass of: SO_0000673
so part of: CLP1
location: complement(join(93882..94553,95339..95944))
location: region:93882-95944:-1
so has part: feature:95339-95944:-1:exon
so has part: feature:93882-94553:-1:exon

XP_030307320.1
type: Protein
SIO_000068: ncbiprotein

position:93882:-1
position: 93882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95944:-1
position: 95944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95339-95944:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:93882-94553:-1:exon

YPEL4
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: YPEL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 96657..98886
location: region:96657-98886:1
so has part: feature:96657-98886:1:exon
subclass of: SO_0000010

103539525
type: Gene
SIO_000068: ncbigene

position:96657:1
position: 96657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98886:1
position: 98886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96657-98886:1:exon

YPEL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: YPEL4
product: yippee like 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030451238.1
SIO_010081: YPEL4
subclass of: SO_0000673
so part of: YPEL4
location: join(96657..96730,97141..97458,98119..98162,98350..98458,98638..98886)
location: region:96657-98886:1
so has part: feature:96657-96730:1:exon
so has part: feature:97141-97458:1:exon
so has part: feature:98119-98162:1:exon
so has part: feature:98350-98458:1:exon
so has part: feature:98638-98886:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:96657-96730:1:exon

position:96730:1
position: 96730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:97141-97458:1:exon

position:97141:1
position: 97141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97458:1
position: 97458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:98119-98162:1:exon

position:98119:1
position: 98119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98162:1
position: 98162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:98350-98458:1:exon

position:98350:1
position: 98350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98458:1
position: 98458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:98638-98886:1:exon

position:98638:1
position: 98638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

YPEL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: YPEL4
product: yippee like 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030451236.1
SIO_010081: YPEL4
subclass of: SO_0000673
so part of: YPEL4
location: join(96835..97476,98119..98162,98350..98458,98638..98883)
location: region:96835-98883:1
so has part: feature:96835-97476:1:exon
so has part: feature:98119-98162:1:exon
so has part: feature:98350-98458:1:exon
so has part: feature:98638-98883:1:exon

position:96835:1
position: 96835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98883:1
position: 98883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96835-97476:1:exon

position:97476:1
position: 97476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:98119-98162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:98350-98458:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:98638-98883:1:exon

YPEL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: YPEL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein yippee-like 4 isoform X1
translation: MGPPPRHHLPPRTFRSYLPRSHRTYSCIHCRAHLARHEELISKVSPVSPSFQGSHGRAYLFNSVVNVGCGPAEQRLLLTGLHSVADIFCQSCKTTLGWKYEQAFESSQKYKEGKFIIEMSHMVKENGWD
SIO_010081: YPEL4
subclass of: SO_0000673
so part of: YPEL4
location: join(97330..97476,98119..98162,98350..98458,98638..98727)
location: region:97330-98727:1
so has part: feature:97330-97476:1:exon
so has part: feature:98119-98162:1:exon
so has part: feature:98350-98458:1:exon
so has part: feature:98638-98727:1:exon

XP_030307096.1
type: Protein
SIO_000068: ncbiprotein

position:97330:1
position: 97330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98727:1
position: 98727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97330-97476:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:98119-98162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:98350-98458:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:98638-98727:1:exon

YPEL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: YPEL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein yippee-like 4 isoform X2
translation: MGPPPRHHLPPRTFRSYLPRSHRTYSCIHCRAHLARHEELISKSFQGSHGRAYLFNSVVNVGCGPAEQRLLLTGLHSVADIFCQSCKTTLGWKYEQAFESSQKYKEGKFIIEMSHMVKENGWD
SIO_010081: YPEL4
subclass of: SO_0000673
so part of: YPEL4
location: join(97330..97458,98119..98162,98350..98458,98638..98727)
location: region:97330-98727:1
so has part: feature:97330-97458:1:exon
so has part: feature:98119-98162:1:exon
so has part: feature:98350-98458:1:exon
so has part: feature:98638-98727:1:exon

XP_030307098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97330-97458:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:98119-98162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:98350-98458:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:98638-98727:1:exon

SERPING1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SERPING1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(99374..103509)
location: region:99374-103509:-1
so has part: feature:99374-103509:-1:exon
subclass of: SO_0000010

103539526
type: Gene
SIO_000068: ncbigene

position:99374:-1
position: 99374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103509:-1
position: 103509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99374-103509:-1:exon

SERPING1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SERPING1
product: serpin family G member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030451150.1
SIO_010081: SERPING1
subclass of: SO_0000673
so part of: SERPING1
location: complement(join(99374..99697,100238..100457,100716..100858,101377..101514,101659..102070,102334..102397,103267..103509))
location: region:99374-103509:-1
so has part: feature:103267-103509:-1:exon
so has part: feature:102334-102397:-1:exon
so has part: feature:101659-102070:-1:exon
so has part: feature:101377-101514:-1:exon
so has part: feature:100716-100858:-1:exon
so has part: feature:100238-100457:-1:exon
so has part: feature:99374-99697:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:103267-103509:-1:exon

position:103267:-1
position: 103267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:102334-102397:-1:exon

position:102334:-1
position: 102334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102397:-1
position: 102397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:101659-102070:-1:exon

position:101659:-1
position: 101659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102070:-1
position: 102070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:101377-101514:-1:exon

position:101377:-1
position: 101377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101514:-1
position: 101514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:100716-100858:-1:exon

position:100716:-1
position: 100716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100858:-1
position: 100858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:100238-100457:-1:exon

position:100238:-1
position: 100238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100457:-1
position: 100457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:99374-99697:-1:exon

position:99697:-1
position: 99697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SERPING1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SERPING1
product: serpin family G member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030451149.1
SIO_010081: SERPING1
subclass of: SO_0000673
so part of: SERPING1
location: complement(join(99374..99697,100238..100457,100716..100858,101101..101304,101377..101514,101659..102070,102334..102397,103267..103509))
location: region:99374-103509:-1
so has part: feature:103267-103509:-1:exon
so has part: feature:102334-102397:-1:exon
so has part: feature:101659-102070:-1:exon
so has part: feature:101377-101514:-1:exon
so has part: feature:101101-101304:-1:exon
so has part: feature:100716-100858:-1:exon
so has part: feature:100238-100457:-1:exon
so has part: feature:99374-99697:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:103267-103509:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:102334-102397:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:101659-102070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:101377-101514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:101101-101304:-1:exon

position:101101:-1
position: 101101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101304:-1
position: 101304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:100716-100858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:100238-100457:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:99374-99697:-1:exon

SERPING1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SERPING1
product: serpin family G member 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_008506036.2
SIO_010081: SERPING1
subclass of: SO_0000673
so part of: SERPING1
location: complement(join(99374..99697,100238..100457,100716..100858,101101..101304,101377..101514,101659..102070,102334..102397,102544..102682))
location: region:99374-102682:-1
so has part: feature:102544-102682:-1:exon
so has part: feature:102334-102397:-1:exon
so has part: feature:101659-102070:-1:exon
so has part: feature:101377-101514:-1:exon
so has part: feature:101101-101304:-1:exon
so has part: feature:100716-100858:-1:exon
so has part: feature:100238-100457:-1:exon
so has part: feature:99374-99697:-1:exon

position:102682:-1
position: 102682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102544-102682:-1:exon

position:102544:-1
position: 102544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:102334-102397:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:101659-102070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:101377-101514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:101101-101304:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:100716-100858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:100238-100457:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:99374-99697:-1:exon

SERPING1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SERPING1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plasma protease C1 inhibitor isoform X2
translation: MGGASPHPPHPLSRDGSRRGNETEPVLGEGSTPATAAPAPSAPRYRHCRSSLPGSPCSRHPLLRDSDSGTPLSGAPRPPTMILRMLLEWLVATATVTPVPEVSPNLPELLLQPPLVTPYPAPAPPGDMRGLVLPEPSPPAGMASPSPPGTPEEPVTTANSSTPEPPGSPSPPCPGDEEPEAACGEPSGEQQAAVAEAVGTFTLRFYQHMAAAAQPGTNLLFSPINVAMGLAHLLLGARGETRDRLATVLGLPPELGCLHSALRQLATAPGLFSATQIFHQPAAWHVPLDPEQTVPLPFLRPGRPPLLVPTMTSKKYPVGSFTDRHLQAQVGRLELSDGLSLVVLVPWGPLGSLGALERALDPPTFLGLLRRAAHTPLRPTALALPRLRLDTAIDVVALVHDMDFGLFLDAELCGLAWGPGVAVDTARHRAVLTLDEAGVEAAGAMATSVARSALLLEALRPFLFILWHDNGSVPIFMGRLSNPQP
SIO_010081: SERPING1
subclass of: SO_0000673
so part of: SERPING1
location: complement(join(99447..99697,100238..100457,100716..100858,101377..101514,101659..102070,102334..102397,103267..103496))
location: region:99447-103496:-1
so has part: feature:103267-103496:-1:exon
so has part: feature:102334-102397:-1:exon
so has part: feature:101659-102070:-1:exon
so has part: feature:101377-101514:-1:exon
so has part: feature:100716-100858:-1:exon
so has part: feature:100238-100457:-1:exon
so has part: feature:99447-99697:-1:exon

XP_030307010.1
type: Protein
SIO_000068: ncbiprotein

position:99447:-1
position: 99447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103496:-1
position: 103496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103267-103496:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:102334-102397:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:101659-102070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:101377-101514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:100716-100858:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:100238-100457:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:99447-99697:-1:exon

SERPING1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SERPING1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plasma protease C1 inhibitor isoform X1
translation: MGGASPHPPHPLSRDGSRRGNETEPVLGEGSTPATAAPAPSAPRYRHCRSSLPGSPCSRHPLLRDSDSGTPLSGAPRPPTMILRMLLEWLVATATVTPVPEVSPNLPELLLQPPLVTPYPAPAPPGDMRGLVLPEPSPPAGMASPSPPGTPEEPVTTANSSTPEPPGSPSPPCPGDEEPEAACGEPSGEQQAAVAEAVGTFTLRFYQHMAAAAQPGTNLLFSPINVAMGLAHLLLGARGETRDRLATVLGLPPELGCLHSALRQLATAPGLFSATQIFHQPGLRLRPRFLNQSWHLYGARPSALSGNETLDLLQVNQWVWEASGGLLPELLPAMPPQAQLLLLSAVHLRAAWHVPLDPEQTVPLPFLRPGRPPLLVPTMTSKKYPVGSFTDRHLQAQVGRLELSDGLSLVVLVPWGPLGSLGALERALDPPTFLGLLRRAAHTPLRPTALALPRLRLDTAIDVVALVHDMDFGLFLDAELCGLAWGPGVAVDTARHRAVLTLDEAGVEAAGAMATSVARSALLLEALRPFLFILWHDNGSVPIFMGRLSNPQP
SIO_010081: SERPING1
subclass of: SO_0000673
so part of: SERPING1
location: complement(join(99447..99697,100238..100457,100716..100858,101101..101304,101377..101514,101659..102070,102334..102397,103267..103496))
location: region:99447-103496:-1
so has part: feature:103267-103496:-1:exon
so has part: feature:102334-102397:-1:exon
so has part: feature:101659-102070:-1:exon
so has part: feature:101377-101514:-1:exon
so has part: feature:101101-101304:-1:exon
so has part: feature:100716-100858:-1:exon
so has part: feature:100238-100457:-1:exon
so has part: feature:99447-99697:-1:exon

XP_030307009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103267-103496:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:102334-102397:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:101659-102070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:101377-101514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:101101-101304:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:100716-100858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:100238-100457:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:99447-99697:-1:exon

SERPING1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SERPING1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plasma protease C1 inhibitor isoform X3
translation: MILRMLLEWLVATATVTPVPEVSPNLPELLLQPPLVTPYPAPAPPGDMRGLVLPEPSPPAGMASPSPPGTPEEPVTTANSSTPEPPGSPSPPCPGDEEPEAACGEPSGEQQAAVAEAVGTFTLRFYQHMAAAAQPGTNLLFSPINVAMGLAHLLLGARGETRDRLATVLGLPPELGCLHSALRQLATAPGLFSATQIFHQPGLRLRPRFLNQSWHLYGARPSALSGNETLDLLQVNQWVWEASGGLLPELLPAMPPQAQLLLLSAVHLRAAWHVPLDPEQTVPLPFLRPGRPPLLVPTMTSKKYPVGSFTDRHLQAQVGRLELSDGLSLVVLVPWGPLGSLGALERALDPPTFLGLLRRAAHTPLRPTALALPRLRLDTAIDVVALVHDMDFGLFLDAELCGLAWGPGVAVDTARHRAVLTLDEAGVEAAGAMATSVARSALLLEALRPFLFILWHDNGSVPIFMGRLSNPQP
SIO_010081: SERPING1
subclass of: SO_0000673
so part of: SERPING1
location: complement(join(99447..99697,100238..100457,100716..100858,101101..101304,101377..101514,101659..102070,102334..102387))
location: region:99447-102387:-1
so has part: feature:102334-102387:-1:exon
so has part: feature:101659-102070:-1:exon
so has part: feature:101377-101514:-1:exon
so has part: feature:101101-101304:-1:exon
so has part: feature:100716-100858:-1:exon
so has part: feature:100238-100457:-1:exon
so has part: feature:99447-99697:-1:exon

XP_008504258.1
type: Protein
SIO_000068: ncbiprotein

position:102387:-1
position: 102387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102334-102387:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:101659-102070:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:101377-101514:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:101101-101304:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:100716-100858:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:100238-100457:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:99447-99697:-1:exon

UBE2L6
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: UBE2L6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 103057..104599
location: region:103057-104599:1
so has part: feature:103057-104599:1:exon
subclass of: SO_0000010

103539527
type: Gene
SIO_000068: ncbigene

position:103057:1
position: 103057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104599:1
position: 104599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103057-104599:1:exon

UBE2L6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: UBE2L6
product: ubiquitin conjugating enzyme E2 L6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030451152.1
SIO_010081: UBE2L6
subclass of: SO_0000673
so part of: UBE2L6
location: join(103057..103147,103557..103646,104067..104256,104335..104599)
location: region:103057-104599:1
so has part: feature:103057-103147:1:exon
so has part: feature:103557-103646:1:exon
so has part: feature:104067-104256:1:exon
so has part: feature:104335-104599:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:103057-103147:1:exon

position:103147:1
position: 103147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:103557-103646:1:exon

position:103557:1
position: 103557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103646:1
position: 103646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:104067-104256:1:exon

position:104067:1
position: 104067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104256:1
position: 104256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:104335-104599:1:exon

position:104335:1
position: 104335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBE2L6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: UBE2L6
product: ubiquitin conjugating enzyme E2 L6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_030451153.1
SIO_010081: UBE2L6
subclass of: SO_0000673
so part of: UBE2L6
location: join(103061..103147,103557..103646,104070..104256,104335..104599)
location: region:103061-104599:1
so has part: feature:103061-103147:1:exon
so has part: feature:103557-103646:1:exon
so has part: feature:104070-104256:1:exon
so has part: feature:104335-104599:1:exon

position:103061:1
position: 103061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103061-103147:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:103557-103646:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104070-104256:1:exon

position:104070:1
position: 104070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:104335-104599:1:exon

UBE2L6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: UBE2L6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin/ISG15-conjugating enzyme E2 L6 isoform X1
translation: MAQRLAKELAECRRWEGVRDLRSVERNVLRWEGLLLPQNTPPYNMGAFRFELTFPPEYPLAPPRATLCTPIYHPAVDPHGGVCQTLTNHKEWKPTTRALQVLQDLLQLLDHPDPQWALRPELARELRDQPQVFYRKAEEHTHRHAEPRHGPPRTLEDMTPPSGNPSGTSGGSQHPTSCS
SIO_010081: UBE2L6
subclass of: SO_0000673
so part of: UBE2L6
location: join(103127..103147,103557..103646,104067..104256,104335..104573)
location: region:103127-104573:1
so has part: feature:103127-103147:1:exon
so has part: feature:103557-103646:1:exon
so has part: feature:104067-104256:1:exon
so has part: feature:104335-104573:1:exon

XP_030307012.1
type: Protein
SIO_000068: ncbiprotein

position:103127:1
position: 103127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104573:1
position: 104573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103127-103147:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:103557-103646:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104067-104256:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:104335-104573:1:exon

UBE2L6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: UBE2L6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin/ISG15-conjugating enzyme E2 L6 isoform X2
translation: MAQRLAKELAECRRWEGVRDLRSVERNVLRWEGLLLPNTPPYNMGAFRFELTFPPEYPLAPPRATLCTPIYHPAVDPHGGVCQTLTNHKEWKPTTRALQVLQDLLQLLDHPDPQWALRPELARELRDQPQVFYRKAEEHTHRHAEPRHGPPRTLEDMTPPSGNPSGTSGGSQHPTSCS
SIO_010081: UBE2L6
subclass of: SO_0000673
so part of: UBE2L6
location: join(103127..103147,103557..103646,104070..104256,104335..104573)
location: region:103127-104573:1
so has part: feature:103127-103147:1:exon
so has part: feature:103557-103646:1:exon
so has part: feature:104070-104256:1:exon
so has part: feature:104335-104573:1:exon

XP_030307013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103127-103147:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:103557-103646:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104070-104256:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:104335-104573:1:exon

SMTNL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SMTNL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(104664..107844)
location: region:104664-107844:-1
so has part: feature:104664-107844:-1:exon
subclass of: SO_0000010

115598375
type: Gene
SIO_000068: ncbigene

position:104664:-1
position: 104664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107844:-1
position: 107844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104664-107844:-1:exon

SMTNL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SMTNL1
product: smoothelin like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030451151.1
SIO_010081: SMTNL1
subclass of: SO_0000673
so part of: SMTNL1
location: complement(join(104664..104881,105280..105431,105504..105606,106029..106169,106321..106354,106590..106767,106851..107445,107774..107844))
location: region:104664-107844:-1
so has part: feature:107774-107844:-1:exon
so has part: feature:106851-107445:-1:exon
so has part: feature:106590-106767:-1:exon
so has part: feature:106321-106354:-1:exon
so has part: feature:106029-106169:-1:exon
so has part: feature:105504-105606:-1:exon
so has part: feature:105280-105431:-1:exon
so has part: feature:104664-104881:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:107774-107844:-1:exon

position:107774:-1
position: 107774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:106851-107445:-1:exon

position:106851:-1
position: 106851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107445:-1
position: 107445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:106590-106767:-1:exon

position:106590:-1
position: 106590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106767:-1
position: 106767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:106321-106354:-1:exon

position:106321:-1
position: 106321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106354:-1
position: 106354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:106029-106169:-1:exon

position:106029:-1
position: 106029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106169:-1
position: 106169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:105504-105606:-1:exon

position:105504:-1
position: 105504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105606:-1
position: 105606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:105280-105431:-1:exon

position:105280:-1
position: 105280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105431:-1
position: 105431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:104664-104881:-1:exon

position:104881:-1
position: 104881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMTNL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SMTNL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: smoothelin-like protein 1
translation: METLGDTSTPTPDTLTPKTPTLDTHSHPSVGPGNGAVGGDGGDSQGERDVGDTGGDPRRTGGTEGDAKAEGAEGAGSNARDTGGNTRGTGDAVGDTKAGTAEGAGGDTGDTGGDTRVTESGTKGTEDDTEDKGGDTRGTEGGTRGTEDSTRDAGCDTRGAGRDTKGTGGTGEARESPQEVAVPAAVDSTRAQQEPTWLQDEDEELWPEFPPCSPTGGAASPTSPMSPTSPMSATCPVSPTSPTSPVSPVALPASTTGGSGGSERAAPLGEVQGRALPGTVGLRPRQDGAGGRPRVSPRAQGRSAILEKFGGAAKGPAPHLKRAGGTATVKAMLLEWCRSRTRGYQNVDVQNFSGSWGSGLAFCALLHSFFPDAFDFATLDPLDRHHNFTLAFTIAEERAGCPPLLEVEDMVRLPVPDAKCVYTYLQELYRCLVGKGLVRTRQR
SIO_010081: SMTNL1
subclass of: SO_0000673
so part of: SMTNL1
location: complement(join(104737..104881,105280..105431,105504..105606,106029..106169,106321..106354,106590..106767,106851..107429))
location: region:104737-107429:-1
so has part: feature:106851-107429:-1:exon
so has part: feature:106590-106767:-1:exon
so has part: feature:106321-106354:-1:exon
so has part: feature:106029-106169:-1:exon
so has part: feature:105504-105606:-1:exon
so has part: feature:105280-105431:-1:exon
so has part: feature:104737-104881:-1:exon

XP_030307011.1
type: Protein
SIO_000068: ncbiprotein

position:104737:-1
position: 104737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107429:-1
position: 107429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106851-107429:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106590-106767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:106321-106354:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:106029-106169:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:105504-105606:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:105280-105431:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:104737-104881:-1:exon

TIMM10
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: TIMM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 108297..108981
location: region:108297-108981:1
so has part: feature:108297-108981:1:exon
subclass of: SO_0000010

103539488
type: Gene
SIO_000068: ncbigene

position:108297:1
position: 108297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108981:1
position: 108981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108297-108981:1:exon

TIMM10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TIMM10
product: translocase of inner mitochondrial membrane 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030451189.1
SIO_010081: TIMM10
subclass of: SO_0000673
so part of: TIMM10
location: join(108297..108445,108720..108981)
location: region:108297-108981:1
so has part: feature:108297-108445:1:exon
so has part: feature:108720-108981:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:108297-108445:1:exon

position:108445:1
position: 108445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:108720-108981:1:exon

position:108720:1
position: 108720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TIMM10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TIMM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial import inner membrane translocase subunit Tim10
translation: MDPLRAQQLAAELEVDMMADMYNRMTQACHRKCVPPHYKESELSKGESVCLDRCVAKYLEVHERMGKKLTELSLQDEELLKRMQQGTGTA
SIO_010081: TIMM10
subclass of: SO_0000673
so part of: TIMM10
location: join(108375..108445,108720..108921)
location: region:108375-108921:1
so has part: feature:108375-108445:1:exon
so has part: feature:108720-108921:1:exon

XP_030307049.1
type: Protein
SIO_000068: ncbiprotein

position:108375:1
position: 108375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108921:1
position: 108921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108375-108445:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108720-108921:1:exon

RTN4RL2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: RTN4RL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(110050..113445)
location: region:110050-113445:-1
so has part: feature:110050-113445:-1:exon
subclass of: SO_0000010

103539528
type: Gene
SIO_000068: ncbigene

position:110050:-1
position: 110050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113445:-1
position: 113445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110050-113445:-1:exon

RTN4RL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RTN4RL2
product: reticulon 4 receptor like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 15 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030451384.1
SIO_010081: RTN4RL2
subclass of: SO_0000673
so part of: RTN4RL2
location: complement(join(110050..110120,110155..110800,111276..111760,113393..113445))
location: region:110050-113445:-1
so has part: feature:113393-113445:-1:exon
so has part: feature:111276-111760:-1:exon
so has part: feature:110155-110800:-1:exon
so has part: feature:110050-110120:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:113393-113445:-1:exon

position:113393:-1
position: 113393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:111276-111760:-1:exon

position:111276:-1
position: 111276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111760:-1
position: 111760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:110155-110800:-1:exon

position:110155:-1
position: 110155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110800:-1
position: 110800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:110050-110120:-1:exon

position:110120:-1
position: 110120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RTN4RL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RTN4RL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reticulon-4 receptor-like 2
translation: MQPPTARDLPPGRRVVALLLAVLAWVPGGAPFCPALCTCYVSPPTVSCQANNFSSVPPGLPAGARRLFLQNNVIRALRAGTFGPSTVTLWLYSNNISSIQPGTFRHLPALEELDLGDNPHLRVLAPDTFRGLRRLQALHLYRCQLASLPSTIFRGLHSLQYLYLQENGLLYLQDDLFADLANLSHLFLHGNRLRALSEGVFRGLPSLDRLLLHANRLATIHRRAFAGLGRLTILYLFNNSLSALPGDPLAALPSLQFLRLNANPWACDCRARSLWAWFRRTRVSSSPVPCASPANRRGSDLRHLRPRDFDACSDDDDDNDDRGGRGDDGGNGHGVMGTPGRARGRPGPLPAAPPSAFYRDGLPPHDLRGPQPRPPPPSRDSRGPPGDSPTATAPRQYPTFLPLLVLLLPWL
SIO_010081: RTN4RL2
subclass of: SO_0000673
so part of: RTN4RL2
location: complement(join(110050..110120,110155..110800,111276..111760,113393..113426))
location: region:110050-113426:-1
so has part: feature:113393-113426:-1:exon
so has part: feature:111276-111760:-1:exon
so has part: feature:110155-110800:-1:exon
so has part: feature:110050-110120:-1:exon

XP_030307244.1
type: Protein
SIO_000068: ncbiprotein

position:113426:-1
position: 113426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113393-113426:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111276-111760:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:110155-110800:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:110050-110120:-1:exon

SLC43A3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SLC43A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 115481..122405
location: region:115481-122405:1
so has part: feature:115481-122405:1:exon
subclass of: SO_0000010

103539529
type: Gene
SIO_000068: ncbigene

position:115481:1
position: 115481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122405:1
position: 122405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115481-122405:1:exon

SLC43A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SLC43A3
product: solute carrier family 43 member 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_030451368.1
SIO_010081: SLC43A3
subclass of: SO_0000673
so part of: SLC43A3
location: join(115481..115612,117959..118163,118609..118738,119074..119120,119213..119289,119389..119481,119554..119693,120069..120199,120489..120647,120748..120861,121375..121561,121924..122048,122169..122405)
location: region:115481-122405:1
so has part: feature:115481-115612:1:exon
so has part: feature:117959-118163:1:exon
so has part: feature:118609-118738:1:exon
so has part: feature:119074-119120:1:exon
so has part: feature:119213-119289:1:exon
so has part: feature:119389-119481:1:exon
so has part: feature:119554-119693:1:exon
so has part: feature:120069-120199:1:exon
so has part: feature:120489-120647:1:exon
so has part: feature:120748-120861:1:exon
so has part: feature:121375-121561:1:exon
so has part: feature:121924-122048:1:exon
so has part: feature:122169-122405:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:115481-115612:1:exon

position:115612:1
position: 115612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:117959-118163:1:exon

position:117959:1
position: 117959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118163:1
position: 118163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:118609-118738:1:exon

position:118609:1
position: 118609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118738:1
position: 118738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:119074-119120:1:exon

position:119074:1
position: 119074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119120:1
position: 119120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:119213-119289:1:exon

position:119213:1
position: 119213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119289:1
position: 119289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:119389-119481:1:exon

position:119389:1
position: 119389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119481:1
position: 119481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:119554-119693:1:exon

position:119554:1
position: 119554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119693:1
position: 119693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:120069-120199:1:exon

position:120069:1
position: 120069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120199:1
position: 120199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:120489-120647:1:exon

position:120489:1
position: 120489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120647:1
position: 120647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:120748-120861:1:exon

position:120748:1
position: 120748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120861:1
position: 120861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:121375-121561:1:exon

position:121375:1
position: 121375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121561:1
position: 121561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:121924-122048:1:exon

position:121924:1
position: 121924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122048:1
position: 122048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:122169-122405:1:exon

position:122169:1
position: 122169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC43A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SLC43A3
product: solute carrier family 43 member 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030451370.1
SIO_010081: SLC43A3
subclass of: SO_0000673
so part of: SLC43A3
location: join(115481..115612,117959..118163,118609..118738,119074..119120,119213..119289,119389..119481,119554..119693,120069..120199,120489..120647,120748..120861,121375..121561,121924..122015,122169..122405)
location: region:115481-122405:1
so has part: feature:115481-115612:1:exon
so has part: feature:117959-118163:1:exon
so has part: feature:118609-118738:1:exon
so has part: feature:119074-119120:1:exon
so has part: feature:119213-119289:1:exon
so has part: feature:119389-119481:1:exon
so has part: feature:119554-119693:1:exon
so has part: feature:120069-120199:1:exon
so has part: feature:120489-120647:1:exon
so has part: feature:120748-120861:1:exon
so has part: feature:121375-121561:1:exon
so has part: feature:121924-122015:1:exon
so has part: feature:122169-122405:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:115481-115612:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:117959-118163:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:118609-118738:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:119074-119120:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:119213-119289:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:119389-119481:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:119554-119693:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:120069-120199:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:120489-120647:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:120748-120861:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:121375-121561:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:121924-122015:1:exon

position:122015:1
position: 122015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:122169-122405:1:exon

SLC43A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SLC43A3
product: solute carrier family 43 member 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030451372.1
SIO_010081: SLC43A3
subclass of: SO_0000673
so part of: SLC43A3
location: join(115481..115612,117959..118163,118609..118738,119074..119120,119213..119289,119389..119481,119554..119693,120069..120199,120489..120647,120748..120861,121375..121561,122169..122405)
location: region:115481-122405:1
so has part: feature:115481-115612:1:exon
so has part: feature:117959-118163:1:exon
so has part: feature:118609-118738:1:exon
so has part: feature:119074-119120:1:exon
so has part: feature:119213-119289:1:exon
so has part: feature:119389-119481:1:exon
so has part: feature:119554-119693:1:exon
so has part: feature:120069-120199:1:exon
so has part: feature:120489-120647:1:exon
so has part: feature:120748-120861:1:exon
so has part: feature:121375-121561:1:exon
so has part: feature:122169-122405:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:115481-115612:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:117959-118163:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:118609-118738:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:119074-119120:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:119213-119289:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:119389-119481:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:119554-119693:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:120069-120199:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:120489-120647:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:120748-120861:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:121375-121561:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:122169-122405:1:exon

SLC43A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SLC43A3
product: solute carrier family 43 member 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030451373.1
SIO_010081: SLC43A3
subclass of: SO_0000673
so part of: SLC43A3
location: join(115481..115612,117959..118163,118609..118738,119074..119120,119213..119289,119389..119481,119554..119693,120069..120199,120492..120647,120748..120861,121375..121561,121904..122048,122169..122405)
location: region:115481-122405:1
so has part: feature:115481-115612:1:exon
so has part: feature:117959-118163:1:exon
so has part: feature:118609-118738:1:exon
so has part: feature:119074-119120:1:exon
so has part: feature:119213-119289:1:exon
so has part: feature:119389-119481:1:exon
so has part: feature:119554-119693:1:exon
so has part: feature:120069-120199:1:exon
so has part: feature:120492-120647:1:exon
so has part: feature:120748-120861:1:exon
so has part: feature:121375-121561:1:exon
so has part: feature:121904-122048:1:exon
so has part: feature:122169-122405:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:115481-115612:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:117959-118163:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:118609-118738:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:119074-119120:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:119213-119289:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:119389-119481:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:119554-119693:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:120069-120199:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:120492-120647:1:exon

position:120492:1
position: 120492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:120748-120861:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:121375-121561:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:121904-122048:1:exon

position:121904:1
position: 121904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:122169-122405:1:exon

SLC43A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SLC43A3
product: solute carrier family 43 member 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_030451369.1
SIO_010081: SLC43A3
subclass of: SO_0000673
so part of: SLC43A3
location: join(115481..115612,117959..118163,118609..118738,119074..119120,119213..119289,119389..119481,119554..119693,120069..120199,120492..120647,120748..120861,121375..121561,121924..122048,122169..122405)
location: region:115481-122405:1
so has part: feature:115481-115612:1:exon
so has part: feature:117959-118163:1:exon
so has part: feature:118609-118738:1:exon
so has part: feature:119074-119120:1:exon
so has part: feature:119213-119289:1:exon
so has part: feature:119389-119481:1:exon
so has part: feature:119554-119693:1:exon
so has part: feature:120069-120199:1:exon
so has part: feature:120492-120647:1:exon
so has part: feature:120748-120861:1:exon
so has part: feature:121375-121561:1:exon
so has part: feature:121924-122048:1:exon
so has part: feature:122169-122405:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:115481-115612:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:117959-118163:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:118609-118738:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:119074-119120:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:119213-119289:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:119389-119481:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:119554-119693:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:120069-120199:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:120492-120647:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:120748-120861:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:121375-121561:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:121924-122048:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:122169-122405:1:exon

SLC43A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SLC43A3
product: solute carrier family 43 member 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030451371.1
SIO_010081: SLC43A3
subclass of: SO_0000673
so part of: SLC43A3
location: join(117972..118163,118592..118738,119074..119120,119213..119289,119389..119481,119554..119693,120069..120199,120489..120647,120748..120861,121375..121561,121924..122048,122169..122405)
location: region:117972-122405:1
so has part: feature:117972-118163:1:exon
so has part: feature:118592-118738:1:exon
so has part: feature:119074-119120:1:exon
so has part: feature:119213-119289:1:exon
so has part: feature:119389-119481:1:exon
so has part: feature:119554-119693:1:exon
so has part: feature:120069-120199:1:exon
so has part: feature:120489-120647:1:exon
so has part: feature:120748-120861:1:exon
so has part: feature:121375-121561:1:exon
so has part: feature:121924-122048:1:exon
so has part: feature:122169-122405:1:exon

position:117972:1
position: 117972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117972-118163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:118592-118738:1:exon

position:118592:1
position: 118592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:119074-119120:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:119213-119289:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:119389-119481:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:119554-119693:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:120069-120199:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:120489-120647:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:120748-120861:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:121375-121561:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:121924-122048:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:122169-122405:1:exon

SLC43A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SLC43A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 43 member 3 isoform X6
translation: MAGGGAGVAKRLGTLVSGLLECGAFCGIIFGWASLVFVLKDLGYFEGLCHPPTHDPNSTLLPDCSRQDEQFSLVFTIGSFMNNFMTFPMGFIFDRFGTAVARFIAISLYTGGTLLVAFSTPELSELLFPAMSMLSVGGILLILTNMQVGNLFGKYRSIIITLYNGAFDSSSAIFLIIKVLYEHGLSLQAMFLFMAACSAWHLLRTLFLMPCTRIPYPLPPTYDYGLRCPGHSRSYRTYEEKRQPGEAGPEEDPLEPEAGRDRGRGLPGVSPPPLPFAACARSALFACHVAWLSAMQLRHYLFIGTLNPLLDHLARGKPGLVSTYTNAFAFTQLCGVLCAPWNGLILDRHKRGRTPRPEGALGTLADLRASVLSLVVTVTQCLLFSVCAAVPLLPVQFVTFVLQVLSRSFLYGGNAAFLAIADPGCPTGSPPQHFGKLYGLAMALSALVALLQYPCVALVRGPLGGDPFYVNLGLIAVVLVAFISPVMVAHECRRRAKELGAAGTPLEAPPNAQPPTHLLH
SIO_010081: SLC43A3
subclass of: SO_0000673
so part of: SLC43A3
location: join(117977..118163,118609..118738,119074..119120,119213..119289,119389..119481,119554..119693,120069..120199,120492..120647,120748..120861,121375..121561,121904..122048,122169..122324)
location: region:117977-122324:1
so has part: feature:117977-118163:1:exon
so has part: feature:118609-118738:1:exon
so has part: feature:119074-119120:1:exon
so has part: feature:119213-119289:1:exon
so has part: feature:119389-119481:1:exon
so has part: feature:119554-119693:1:exon
so has part: feature:120069-120199:1:exon
so has part: feature:120492-120647:1:exon
so has part: feature:120748-120861:1:exon
so has part: feature:121375-121561:1:exon
so has part: feature:121904-122048:1:exon
so has part: feature:122169-122324:1:exon

XP_030307233.1
type: Protein
SIO_000068: ncbiprotein

position:117977:1
position: 117977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122324:1
position: 122324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117977-118163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:118609-118738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:119074-119120:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:119213-119289:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:119389-119481:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:119554-119693:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:120069-120199:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:120492-120647:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:120748-120861:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:121375-121561:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:121904-122048:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:122169-122324:1:exon

SLC43A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SLC43A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 43 member 3 isoform X1
translation: MAGGGAGVAKRLGTLVSGLLECGAFCGIIFGWASLVFVLKDLGYFEGLCHPPTHDPNSTLLPDCSRQDEQFSLVFTIGSFMNNFMTFPMGFIFDRFGTAVARFIAISLYTGGTLLVAFSTPELSELLFPAMSMLSVGGILLILTNMQVGNLFGKYRSIIITLYNGAFDSSSAIFLIIKVLYEHGLSLQAMFLFMAACSAWHLLRTLFLMPCTRIPYPLPPTYDYGLRCPGHSRSYRTYEEKRQPGEAGPEEDPLEPEAGRDRGRGLPGAVSPPPLPFAACARSALFACHVAWLSAMQLRHYLFIGTLNPLLDHLARGKPGLVSTYTNAFAFTQLCGVLCAPWNGLILDRHKRGRTPRPEGALGTLADLRASVLSLVVTVTQCLLFSVCAAVPLLPVQFVTFVLQVLSRSFLYGGNAAFLAIAFPPPALWEALWPGHGTVSAGGPAAVPLRGPGAWTPGWGPLLCELGAHCRGAGGLYQPSDGGS
SIO_010081: SLC43A3
subclass of: SO_0000673
so part of: SLC43A3
location: join(117977..118163,118609..118738,119074..119120,119213..119289,119389..119481,119554..119693,120069..120199,120489..120647,120748..120861,121375..121561,121924..122048,122169..122233)
location: region:117977-122233:1
so has part: feature:117977-118163:1:exon
so has part: feature:118609-118738:1:exon
so has part: feature:119074-119120:1:exon
so has part: feature:119213-119289:1:exon
so has part: feature:119389-119481:1:exon
so has part: feature:119554-119693:1:exon
so has part: feature:120069-120199:1:exon
so has part: feature:120489-120647:1:exon
so has part: feature:120748-120861:1:exon
so has part: feature:121375-121561:1:exon
so has part: feature:121924-122048:1:exon
so has part: feature:122169-122233:1:exon

XP_030307228.1
type: Protein
SIO_000068: ncbiprotein

position:122233:1
position: 122233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117977-118163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:118609-118738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:119074-119120:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:119213-119289:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:119389-119481:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:119554-119693:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:120069-120199:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:120489-120647:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:120748-120861:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:121375-121561:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:121924-122048:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:122169-122233:1:exon

SLC43A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SLC43A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 43 member 3 isoform X3
translation: MAGGGAGVAKRLGTLVSGLLECGAFCGIIFGWASLVFVLKDLGYFEGLCHPPTHDPNSTLLPDCSRQDEQFSLVFTIGSFMNNFMTFPMGFIFDRFGTAVARFIAISLYTGGTLLVAFSTPELSELLFPAMSMLSVGGILLILTNMQVGNLFGKYRSIIITLYNGAFDSSSAIFLIIKVLYEHGLSLQAMFLFMAACSAWHLLRTLFLMPCTRIPYPLPPTYDYGLRCPGHSRSYRTYEEKRQPGEAGPEEDPLEPEAGRDRGRGLPGAVSPPPLPFAACARSALFACHVAWLSAMQLRHYLFIGTLNPLLDHLARGKPGLVSTYTNAFAFTQLCGVLCAPWNGLILDRHKRGRTPRPEGALGTLADLRASVLSLVVTVTQCLLFSVCAAVPLLPVQFVTFVLQVLSRSFLYGGNAAFLAIAFPPPALWEALWPGHGTVSAGGPAAVPLRGPGELGAHCRGAGGLYQPSDGGS
SIO_010081: SLC43A3
subclass of: SO_0000673
so part of: SLC43A3
location: join(117977..118163,118609..118738,119074..119120,119213..119289,119389..119481,119554..119693,120069..120199,120489..120647,120748..120861,121375..121561,121924..122015,122169..122233)
location: region:117977-122233:1
so has part: feature:117977-118163:1:exon
so has part: feature:118609-118738:1:exon
so has part: feature:119074-119120:1:exon
so has part: feature:119213-119289:1:exon
so has part: feature:119389-119481:1:exon
so has part: feature:119554-119693:1:exon
so has part: feature:120069-120199:1:exon
so has part: feature:120489-120647:1:exon
so has part: feature:120748-120861:1:exon
so has part: feature:121375-121561:1:exon
so has part: feature:121924-122015:1:exon
so has part: feature:122169-122233:1:exon

XP_030307230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117977-118163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:118609-118738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:119074-119120:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:119213-119289:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:119389-119481:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:119554-119693:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:120069-120199:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:120489-120647:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:120748-120861:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:121375-121561:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:121924-122015:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:122169-122233:1:exon

SLC43A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SLC43A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 43 member 3 isoform X2
translation: MAGGGAGVAKRLGTLVSGLLECGAFCGIIFGWASLVFVLKDLGYFEGLCHPPTHDPNSTLLPDCSRQDEQFSLVFTIGSFMNNFMTFPMGFIFDRFGTAVARFIAISLYTGGTLLVAFSTPELSELLFPAMSMLSVGGILLILTNMQVGNLFGKYRSIIITLYNGAFDSSSAIFLIIKVLYEHGLSLQAMFLFMAACSAWHLLRTLFLMPCTRIPYPLPPTYDYGLRCPGHSRSYRTYEEKRQPGEAGPEEDPLEPEAGRDRGRGLPGVSPPPLPFAACARSALFACHVAWLSAMQLRHYLFIGTLNPLLDHLARGKPGLVSTYTNAFAFTQLCGVLCAPWNGLILDRHKRGRTPRPEGALGTLADLRASVLSLVVTVTQCLLFSVCAAVPLLPVQFVTFVLQVLSRSFLYGGNAAFLAIAFPPPALWEALWPGHGTVSAGGPAAVPLRGPGAWTPGWGPLLCELGAHCRGAGGLYQPSDGGS
SIO_010081: SLC43A3
subclass of: SO_0000673
so part of: SLC43A3
location: join(117977..118163,118609..118738,119074..119120,119213..119289,119389..119481,119554..119693,120069..120199,120492..120647,120748..120861,121375..121561,121924..122048,122169..122233)
location: region:117977-122233:1
so has part: feature:117977-118163:1:exon
so has part: feature:118609-118738:1:exon
so has part: feature:119074-119120:1:exon
so has part: feature:119213-119289:1:exon
so has part: feature:119389-119481:1:exon
so has part: feature:119554-119693:1:exon
so has part: feature:120069-120199:1:exon
so has part: feature:120492-120647:1:exon
so has part: feature:120748-120861:1:exon
so has part: feature:121375-121561:1:exon
so has part: feature:121924-122048:1:exon
so has part: feature:122169-122233:1:exon

XP_030307229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117977-118163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:118609-118738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:119074-119120:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:119213-119289:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:119389-119481:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:119554-119693:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:120069-120199:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:120492-120647:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:120748-120861:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:121375-121561:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:121924-122048:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:122169-122233:1:exon

SLC43A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SLC43A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 43 member 3 isoform X5
translation: MAGGGAGVAKRLGTLVSGLLECGAFCGIIFGWASLVFVLKDLGYFEGLCHPPTHDPNSTLLPDCSRQDEQFSLVFTIGSFMNNFMTFPMGFIFDRFGTAVARFIAISLYTGGTLLVAFSTPELSELLFPAMSMLSVGGILLILTNMQVGNLFGKYRSIIITLYNGAFDSSSAIFLIIKVLYEHGLSLQAMFLFMAACSAWHLLRTLFLMPCTRIPYPLPPTYDYGLRCPGHSRSYRTYEEKRQPGEAGPEEDPLEPEAGRDRGRGLPGAVSPPPLPFAACARSALFACHVAWLSAMQLRHYLFIGTLNPLLDHLARGKPGLVSTYTNAFAFTQLCGVLCAPWNGLILDRHKRGRTPRPEGALGTLADLRASVLSLVVTVTQCLLFSVCAAVPLLPVQFVTFVLQVLSRSFLYGGNAAFLAIA
SIO_010081: SLC43A3
subclass of: SO_0000673
so part of: SLC43A3
location: join(117977..118163,118609..118738,119074..119120,119213..119289,119389..119481,119554..119693,120069..120199,120489..120647,120748..120861,121375..121561,122169..122172)
location: region:117977-122172:1
so has part: feature:117977-118163:1:exon
so has part: feature:118609-118738:1:exon
so has part: feature:119074-119120:1:exon
so has part: feature:119213-119289:1:exon
so has part: feature:119389-119481:1:exon
so has part: feature:119554-119693:1:exon
so has part: feature:120069-120199:1:exon
so has part: feature:120489-120647:1:exon
so has part: feature:120748-120861:1:exon
so has part: feature:121375-121561:1:exon
so has part: feature:122169-122172:1:exon

XP_030307232.1
type: Protein
SIO_000068: ncbiprotein

position:122172:1
position: 122172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117977-118163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:118609-118738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:119074-119120:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:119213-119289:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:119389-119481:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:119554-119693:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:120069-120199:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:120489-120647:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:120748-120861:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:121375-121561:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:122169-122172:1:exon

SLC43A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SLC43A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 43 member 3 isoform X4
translation: MGLTCLRAQGPGVLRGAVPPSNPRPQQHLAASVPVPADCSRQDEQFSLVFTIGSFMNNFMTFPMGFIFDRFGTAVARFIAISLYTGGTLLVAFSTPELSELLFPAMSMLSVGGILLILTNMQVGNLFGKYRSIIITLYNGAFDSSSAIFLIIKVLYEHGLSLQAMFLFMAACSAWHLLRTLFLMPCTRIPYPLPPTYDYGLRCPGHSRSYRTYEEKRQPGEAGPEEDPLEPEAGRDRGRGLPGAVSPPPLPFAACARSALFACHVAWLSAMQLRHYLFIGTLNPLLDHLARGKPGLVSTYTNAFAFTQLCGVLCAPWNGLILDRHKRGRTPRPEGALGTLADLRASVLSLVVTVTQCLLFSVCAAVPLLPVQFVTFVLQVLSRSFLYGGNAAFLAIAFPPPALWEALWPGHGTVSAGGPAAVPLRGPGAWTPGWGPLLCELGAHCRGAGGLYQPSDGGS
SIO_010081: SLC43A3
subclass of: SO_0000673
so part of: SLC43A3
location: join(118069..118163,118592..118738,119074..119120,119213..119289,119389..119481,119554..119693,120069..120199,120489..120647,120748..120861,121375..121561,121924..122048,122169..122233)
location: region:118069-122233:1
so has part: feature:118069-118163:1:exon
so has part: feature:118592-118738:1:exon
so has part: feature:119074-119120:1:exon
so has part: feature:119213-119289:1:exon
so has part: feature:119389-119481:1:exon
so has part: feature:119554-119693:1:exon
so has part: feature:120069-120199:1:exon
so has part: feature:120489-120647:1:exon
so has part: feature:120748-120861:1:exon
so has part: feature:121375-121561:1:exon
so has part: feature:121924-122048:1:exon
so has part: feature:122169-122233:1:exon

XP_030307231.1
type: Protein
SIO_000068: ncbiprotein

position:118069:1
position: 118069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118069-118163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:118592-118738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:119074-119120:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:119213-119289:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:119389-119481:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:119554-119693:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:120069-120199:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:120489-120647:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:120748-120861:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:121375-121561:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:121924-122048:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:122169-122233:1:exon

LOC103539530
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103539530
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 122489..127294
location: region:122489-127294:1
so has part: feature:122489-127294:1:exon
subclass of: SO_0000010

103539530
type: Gene
SIO_000068: ncbigene

position:122489:1
position: 122489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127294:1
position: 127294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122489-127294:1:exon

LOC103539530
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103539530
product: proteoglycan 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030451380.1
SIO_010081: LOC103539530
subclass of: SO_0000673
so part of: LOC103539530
location: join(122489..123734,126012..126308,126526..126660,126886..126997,127215..127294)
location: region:122489-127294:1
so has part: feature:122489-123734:1:exon
so has part: feature:126012-126308:1:exon
so has part: feature:126526-126660:1:exon
so has part: feature:126886-126997:1:exon
so has part: feature:127215-127294:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122489-123734:1:exon

position:123734:1
position: 123734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:126012-126308:1:exon

position:126012:1
position: 126012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126308:1
position: 126308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:126526-126660:1:exon

position:126526:1
position: 126526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126660:1
position: 126660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:126886-126997:1:exon

position:126886:1
position: 126886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126997:1
position: 126997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:127215-127294:1:exon

position:127215:1
position: 127215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC103539530
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103539530
product: proteoglycan 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030451377.1
SIO_010081: LOC103539530
subclass of: SO_0000673
so part of: LOC103539530
location: join(122489..123734,126012..126090,126213..126308,126526..126660,126886..126997,127215..127294)
location: region:122489-127294:1
so has part: feature:122489-123734:1:exon
so has part: feature:126012-126090:1:exon
so has part: feature:126213-126308:1:exon
so has part: feature:126526-126660:1:exon
so has part: feature:126886-126997:1:exon
so has part: feature:127215-127294:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122489-123734:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126012-126090:1:exon

position:126090:1
position: 126090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:126213-126308:1:exon

position:126213:1
position: 126213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:126526-126660:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:126886-126997:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:127215-127294:1:exon

LOC103539530
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103539530
product: proteoglycan 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030451379.1
SIO_010081: LOC103539530
subclass of: SO_0000673
so part of: LOC103539530
location: join(122489..123734,126012..126090,126213..126308,126886..126997,127215..127294)
location: region:122489-127294:1
so has part: feature:122489-123734:1:exon
so has part: feature:126012-126090:1:exon
so has part: feature:126213-126308:1:exon
so has part: feature:126886-126997:1:exon
so has part: feature:127215-127294:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122489-123734:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126012-126090:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126213-126308:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126886-126997:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127215-127294:1:exon

LOC103539530
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103539530
product: proteoglycan 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030451378.1
SIO_010081: LOC103539530
subclass of: SO_0000673
so part of: LOC103539530
location: join(122489..123734,126012..126090,126526..126660,126886..126997,127215..127294)
location: region:122489-127294:1
so has part: feature:122489-123734:1:exon
so has part: feature:126012-126090:1:exon
so has part: feature:126526-126660:1:exon
so has part: feature:126886-126997:1:exon
so has part: feature:127215-127294:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122489-123734:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126012-126090:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126526-126660:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126886-126997:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127215-127294:1:exon

LOC115598392
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115598392
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(122539..124555)
location: region:122539-124555:-1
so has part: feature:122539-124555:-1:exon
subclass of: SO_0000010

115598392
type: Gene
SIO_000068: ncbigene

position:122539:-1
position: 122539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124555:-1
position: 124555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122539-124555:-1:exon

LOC115598392
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC115598392
product: bone marrow proteoglycan-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030451382.1
SIO_010081: LOC115598392
subclass of: SO_0000673
so part of: LOC115598392
location: complement(join(122539..122677,123138..123240,123381..123512,123842..123951,124038..124131,124368..124555))
location: region:122539-124555:-1
so has part: feature:124368-124555:-1:exon
so has part: feature:124038-124131:-1:exon
so has part: feature:123842-123951:-1:exon
so has part: feature:123381-123512:-1:exon
so has part: feature:123138-123240:-1:exon
so has part: feature:122539-122677:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:124368-124555:-1:exon

position:124368:-1
position: 124368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:124038-124131:-1:exon

position:124038:-1
position: 124038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124131:-1
position: 124131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:123842-123951:-1:exon

position:123842:-1
position: 123842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123951:-1
position: 123951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:123381-123512:-1:exon

position:123381:-1
position: 123381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123512:-1
position: 123512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:123138-123240:-1:exon

position:123138:-1
position: 123138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123240:-1
position: 123240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:122539-122677:-1:exon

position:122677:-1
position: 122677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115598392
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC115598392
product: bone marrow proteoglycan-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030451381.1
SIO_010081: LOC115598392
subclass of: SO_0000673
so part of: LOC115598392
location: complement(join(122539..122677,123138..123249,123381..123512,123842..123951,124038..124131,124368..124555))
location: region:122539-124555:-1
so has part: feature:124368-124555:-1:exon
so has part: feature:124038-124131:-1:exon
so has part: feature:123842-123951:-1:exon
so has part: feature:123381-123512:-1:exon
so has part: feature:123138-123249:-1:exon
so has part: feature:122539-122677:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:124368-124555:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:124038-124131:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:123842-123951:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:123381-123512:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:123138-123249:-1:exon

position:123249:-1
position: 123249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:122539-122677:-1:exon

LOC115598392
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC115598392
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bone marrow proteoglycan-like isoform X2
translation: MCPCLLLVLSLLGTSLSSPPGLTPSSPAAPPGLTLALEHPQFRYAVVTKLRTYAGALEHCQRVFGGLLASVHSISRNKELVALARTYTHRKVWIGAVTSYRWGSWWEDASPWNYANWATAQPSHLIPTCTTLSTHDGLWRSRFCFELHPFICQY
SIO_010081: LOC115598392
subclass of: SO_0000673
so part of: LOC115598392
location: complement(join(122619..122677,123138..123240,123381..123512,123842..123951,124038..124098))
location: region:122619-124098:-1
so has part: feature:124038-124098:-1:exon
so has part: feature:123842-123951:-1:exon
so has part: feature:123381-123512:-1:exon
so has part: feature:123138-123240:-1:exon
so has part: feature:122619-122677:-1:exon

XP_030307242.1
type: Protein
SIO_000068: ncbiprotein

position:122619:-1
position: 122619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124098:-1
position: 124098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124038-124098:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:123842-123951:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:123381-123512:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:123138-123240:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:122619-122677:-1:exon

LOC115598392
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC115598392
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteoglycan 3-like isoform X1
translation: MCPCLLLVLSLLGTSLSSPPGLTPSSPAAPPGLTLALEHPQFRYAVVTKLRTYAGALEHCQRVFGGLLASVHSISRNKELVALARTYTHRKVWIGAVTSYRGGQWGSWWEDASPWNYANWATAQPSHLIPTCTTLSTHDGLWRSRFCFELHPFICQY
SIO_010081: LOC115598392
subclass of: SO_0000673
so part of: LOC115598392
location: complement(join(122619..122677,123138..123249,123381..123512,123842..123951,124038..124098))
location: region:122619-124098:-1
so has part: feature:124038-124098:-1:exon
so has part: feature:123842-123951:-1:exon
so has part: feature:123381-123512:-1:exon
so has part: feature:123138-123249:-1:exon
so has part: feature:122619-122677:-1:exon

XP_030307241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124038-124098:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:123842-123951:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:123381-123512:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:123138-123249:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:122619-122677:-1:exon

LOC103539530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103539530
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC103539530 isoform X1
translation: MLCTEASSPPKTLWQCSWEGEAPISTLTPQEPTSIPLKTHQEPLAPLGPSTHPGASPASSEPSSSDPERIGHGLAPQQPLENSPRPPAVLLSLVFSALQCIPAWPWPCWAQPCPAPLGDTRKAVAPALQGVPNLRYIIVTRALTFRHAERVCARQYGGHLAAIHSSATNAVLWAQARLSNCGGKFWIGAVTKPWHRSMQCHWVDRTRWDFSNWQPGHPLCRARFCTSLCTADGHWRSQSCKQRLPFICEC
SIO_010081: LOC103539530
subclass of: SO_0000673
so part of: LOC103539530
location: join(123463..123734,126012..126090,126213..126308,126526..126660,126886..126997,127215..127273)
location: region:123463-127273:1
so has part: feature:123463-123734:1:exon
so has part: feature:126012-126090:1:exon
so has part: feature:126213-126308:1:exon
so has part: feature:126526-126660:1:exon
so has part: feature:126886-126997:1:exon
so has part: feature:127215-127273:1:exon

XP_030307237.1
type: Protein
SIO_000068: ncbiprotein

position:123463:1
position: 123463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127273:1
position: 127273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123463-123734:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126012-126090:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126213-126308:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126526-126660:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:126886-126997:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:127215-127273:1:exon

LOC103539530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103539530
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC103539530 isoform X3
translation: MLCTEASSPPKTLWQCSWEGEAPISTLTPQEPTSIPLKTHQEPLAPLGPSTHPGASPASSEPSSSDPERIGHGLAPQQPLENSPRPPAVLLSLVFSALQCIPAWPWPCWAQPCPAPLGDTRKAVAPALQGVPNLRYIIVTRALTFRHAEHRSMQCHWVDRTRWDFSNWQPGHPLCRARFCTSLCTADGHWRSQSCKQRLPFICEC
SIO_010081: LOC103539530
subclass of: SO_0000673
so part of: LOC103539530
location: join(123463..123734,126012..126090,126213..126308,126886..126997,127215..127273)
location: region:123463-127273:1
so has part: feature:123463-123734:1:exon
so has part: feature:126012-126090:1:exon
so has part: feature:126213-126308:1:exon
so has part: feature:126886-126997:1:exon
so has part: feature:127215-127273:1:exon

XP_030307239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123463-123734:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126012-126090:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126213-126308:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126886-126997:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127215-127273:1:exon

LOC103539530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103539530
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC103539530 isoform X2
translation: MLCTEASSPPKTLWQCSWEGEAPISTLTPQEPTSIPLKTHQEPLAPLGPSTHPGASPASSEPSSSDPERIGHGLAPQQPLENSPRPPAVLLSLVFSALQCIPAWPWPCWAQPCPAPLRVCARQYGGHLAAIHSSATNAVLWAQARLSNCGGKFWIGAVTKPWHRSMQCHWVDRTRWDFSNWQPGHPLCRARFCTSLCTADGHWRSQSCKQRLPFICEC
SIO_010081: LOC103539530
subclass of: SO_0000673
so part of: LOC103539530
location: join(123463..123734,126012..126090,126526..126660,126886..126997,127215..127273)
location: region:123463-127273:1
so has part: feature:123463-123734:1:exon
so has part: feature:126012-126090:1:exon
so has part: feature:126526-126660:1:exon
so has part: feature:126886-126997:1:exon
so has part: feature:127215-127273:1:exon

XP_030307238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123463-123734:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126012-126090:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126526-126660:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126886-126997:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127215-127273:1:exon

LOC103539530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103539530
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteoglycan 3 isoform X4
translation: MHPCLALALLGTALSSPSGECHHPWRNPGDTQVFHTPLPGVSPAPASPEVSKESLELLQGDTRKAVAPALQGVPNLRYIIVTRALTFRHAERVCARQYGGHLAAIHSSATNAVLWAQARLSNCGGKFWIGAVTKPWHRSMQCHWVDRTRWDFSNWQPGHPLCRARFCTSLCTADGHWRSQSCKQRLPFICEC
SIO_010081: LOC103539530
subclass of: SO_0000673
so part of: LOC103539530
location: join(126036..126308,126526..126660,126886..126997,127215..127273)
location: region:126036-127273:1
so has part: feature:126036-126308:1:exon
so has part: feature:126526-126660:1:exon
so has part: feature:126886-126997:1:exon
so has part: feature:127215-127273:1:exon

XP_030307240.1
type: Protein
SIO_000068: ncbiprotein

position:126036:1
position: 126036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126036-126308:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126526-126660:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126886-126997:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:127215-127273:1:exon

P2RX3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: P2RX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(127739..130868)
location: region:127739-130868:-1
so has part: feature:127739-130868:-1:exon
subclass of: SO_0000010

103539531
type: Gene
SIO_000068: ncbigene

position:127739:-1
position: 127739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130868:-1
position: 130868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127739-130868:-1:exon

P2RX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: P2RX3
product: purinergic receptor P2X 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030451376.1
SIO_010081: P2RX3
subclass of: SO_0000673
so part of: P2RX3
location: complement(join(127739..127921,128144..128221,128399..128464,128536..128629,128731..128861,129406..129538,129622..129699,129777..129870,130284..130350,130439..130510,130592..130868))
location: region:127739-130868:-1
so has part: feature:130592-130868:-1:exon
so has part: feature:130439-130510:-1:exon
so has part: feature:130284-130350:-1:exon
so has part: feature:129777-129870:-1:exon
so has part: feature:129622-129699:-1:exon
so has part: feature:129406-129538:-1:exon
so has part: feature:128731-128861:-1:exon
so has part: feature:128536-128629:-1:exon
so has part: feature:128399-128464:-1:exon
so has part: feature:128144-128221:-1:exon
so has part: feature:127739-127921:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:130592-130868:-1:exon

position:130592:-1
position: 130592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:130439-130510:-1:exon

position:130439:-1
position: 130439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130510:-1
position: 130510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:130284-130350:-1:exon

position:130284:-1
position: 130284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130350:-1
position: 130350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:129777-129870:-1:exon

position:129777:-1
position: 129777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129870:-1
position: 129870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:129622-129699:-1:exon

position:129622:-1
position: 129622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129699:-1
position: 129699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:129406-129538:-1:exon

position:129406:-1
position: 129406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129538:-1
position: 129538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:128731-128861:-1:exon

position:128731:-1
position: 128731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128861:-1
position: 128861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:128536-128629:-1:exon

position:128536:-1
position: 128536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128629:-1
position: 128629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:128399-128464:-1:exon

position:128399:-1
position: 128399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128464:-1
position: 128464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:128144-128221:-1:exon

position:128144:-1
position: 128144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128221:-1
position: 128221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:127739-127921:-1:exon

position:127921:-1
position: 127921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

P2RX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: P2RX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2X purinoceptor 3
translation: MCLSPLLLPVPRWVFLHEKAYQVRDTAIESSVVTKVKGVGRYAGRVLDTADYVTPPQGTSVFVVVTKQILTENQAQGLCPEGDPRYRCTADHHCQGMGTTTGSGVLTGRCVPFNRTLHTCEIQGWCPAEVDTVDVPVMLEAENFTLLIKNSVRFPLFGFEKANLPPPGELGRCRFHPQHQPLCPILRLGDVARMAGQDFPTLAATGGVLGIKIGWVCDLDRGGERCLPRYSFTRLDGLPPATAAGYNFRHARYYRWQDGTERRTLTKAFGIRFDVLVYGNAGKFSIVPTLINAVAAFTSIGVGTVLCDIILLNCLRGAEHYKARKFEEVPEVTMPPASLTAGPPPRDPSRDSGTSSLGL
SIO_010081: P2RX3
subclass of: SO_0000673
so part of: P2RX3
location: complement(join(127826..127921,128144..128221,128399..128464,128536..128629,128731..128861,129406..129538,129622..129699,129777..129870,130284..130350,130439..130510,130592..130762))
location: region:127826-130762:-1
so has part: feature:130592-130762:-1:exon
so has part: feature:130439-130510:-1:exon
so has part: feature:130284-130350:-1:exon
so has part: feature:129777-129870:-1:exon
so has part: feature:129622-129699:-1:exon
so has part: feature:129406-129538:-1:exon
so has part: feature:128731-128861:-1:exon
so has part: feature:128536-128629:-1:exon
so has part: feature:128399-128464:-1:exon
so has part: feature:128144-128221:-1:exon
so has part: feature:127826-127921:-1:exon

XP_030307236.1
type: Protein
SIO_000068: ncbiprotein

position:127826:-1
position: 127826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130762:-1
position: 130762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130592-130762:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:130439-130510:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130284-130350:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:129777-129870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:129622-129699:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:129406-129538:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:128731-128861:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:128536-128629:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:128399-128464:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:128144-128221:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:127826-127921:-1:exon

SSRP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SSRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 132419..138626
location: region:132419-138626:1
so has part: feature:132419-138626:1:exon
subclass of: SO_0000010

103539489
type: Gene
SIO_000068: ncbigene

position:132419:1
position: 132419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138626:1
position: 138626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132419-138626:1:exon

SSRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SSRP1
product: structure specific recognition protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 3 ESTs, 1 long SRA read, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030451366.1
SIO_010081: SSRP1
subclass of: SO_0000673
so part of: SSRP1
location: join(132419..132456,133001..133145,133316..133501,133899..134004,134092..134282,134376..134606,134694..134797,134907..135035,135418..135639,135713..135785,136214..136352,136445..136490,136943..137066,137208..137381,137559..137650,137811..137991,138222..138626)
location: region:132419-138626:1
so has part: feature:132419-132456:1:exon
so has part: feature:133001-133145:1:exon
so has part: feature:133316-133501:1:exon
so has part: feature:133899-134004:1:exon
so has part: feature:134092-134282:1:exon
so has part: feature:134376-134606:1:exon
so has part: feature:134694-134797:1:exon
so has part: feature:134907-135035:1:exon
so has part: feature:135418-135639:1:exon
so has part: feature:135713-135785:1:exon
so has part: feature:136214-136352:1:exon
so has part: feature:136445-136490:1:exon
so has part: feature:136943-137066:1:exon
so has part: feature:137208-137381:1:exon
so has part: feature:137559-137650:1:exon
so has part: feature:137811-137991:1:exon
so has part: feature:138222-138626:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:132419-132456:1:exon

position:132456:1
position: 132456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:133001-133145:1:exon

position:133001:1
position: 133001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133145:1
position: 133145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:133316-133501:1:exon

position:133316:1
position: 133316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133501:1
position: 133501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:133899-134004:1:exon

position:133899:1
position: 133899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134004:1
position: 134004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:134092-134282:1:exon

position:134092:1
position: 134092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134282:1
position: 134282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:134376-134606:1:exon

position:134376:1
position: 134376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134606:1
position: 134606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:134694-134797:1:exon

position:134694:1
position: 134694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134797:1
position: 134797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:134907-135035:1:exon

position:134907:1
position: 134907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135035:1
position: 135035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:135418-135639:1:exon

position:135418:1
position: 135418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135639:1
position: 135639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:135713-135785:1:exon

position:135713:1
position: 135713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135785:1
position: 135785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:136214-136352:1:exon

position:136214:1
position: 136214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136352:1
position: 136352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:136445-136490:1:exon

position:136445:1
position: 136445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136490:1
position: 136490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:136943-137066:1:exon

position:136943:1
position: 136943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137066:1
position: 137066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:137208-137381:1:exon

position:137208:1
position: 137208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137381:1
position: 137381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:137559-137650:1:exon

position:137559:1
position: 137559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137650:1
position: 137650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:137811-137991:1:exon

position:137811:1
position: 137811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137991:1
position: 137991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:138222-138626:1:exon

position:138222:1
position: 138222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SSRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SSRP1
product: structure specific recognition protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 3 ESTs, 1 long SRA read, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030451367.1
SIO_010081: SSRP1
subclass of: SO_0000673
so part of: SSRP1
location: join(132461..132489,133001..133145,133316..133501,133899..134004,134092..134282,134376..134606,134694..134797,134907..135035,135418..135639,135713..135785,136214..136352,136445..136490,136943..137066,137208..137381,137559..137650,137811..137991,138222..138626)
location: region:132461-138626:1
so has part: feature:132461-132489:1:exon
so has part: feature:133001-133145:1:exon
so has part: feature:133316-133501:1:exon
so has part: feature:133899-134004:1:exon
so has part: feature:134092-134282:1:exon
so has part: feature:134376-134606:1:exon
so has part: feature:134694-134797:1:exon
so has part: feature:134907-135035:1:exon
so has part: feature:135418-135639:1:exon
so has part: feature:135713-135785:1:exon
so has part: feature:136214-136352:1:exon
so has part: feature:136445-136490:1:exon
so has part: feature:136943-137066:1:exon
so has part: feature:137208-137381:1:exon
so has part: feature:137559-137650:1:exon
so has part: feature:137811-137991:1:exon
so has part: feature:138222-138626:1:exon

position:132461:1
position: 132461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132461-132489:1:exon

position:132489:1
position: 132489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:133001-133145:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133316-133501:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133899-134004:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134092-134282:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:134376-134606:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:134694-134797:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:134907-135035:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:135418-135639:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:135713-135785:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:136214-136352:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:136445-136490:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:136943-137066:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:137208-137381:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:137559-137650:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:137811-137991:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:138222-138626:1:exon

SSRP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SSRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FACT complex subunit SSRP1
translation: MADTLEFNEIYQEVKGSMNDGRLRLSRQGVIFKNSKTGKVDNIQASELAEGVWRRVALGHGLKLLTKNGHVYKYDGFRESEFDKLSEFFRAHYRLELAERDLCVKGWNWGTVRFGGQLLSFDIGEQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFIYVHKPPVHIRFDEIAFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNAKKLNIKNRGLKEGMKQSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDGSGEETDESFNPGEEDDDVAEEFDSNASASSSSGEGDSDRGEKKPAKKVKVAKERKPRKKQQESKKGGKDPHAPKRPMSAYMLWLNASRERIKSDHPGISITDLSKKAGELWKAMSKEKKEEWDRKAEDARRDYEKAMKEYSGGSRSESSRGERSKKKKKKQEKQVRGRGERKVPPRPAASSKSPAKSGSESFKSKEFVSSDESSSAESKKEDSEEEGAASPPPSSEDSASGSD
SIO_010081: SSRP1
subclass of: SO_0000673
so part of: SSRP1
location: join(133092..133145,133316..133501,133899..134004,134092..134282,134376..134606,134694..134797,134907..135035,135418..135639,135713..135785,136214..136352,136445..136490,136943..137066,137208..137381,137559..137650,137811..137991,138222..138290)
location: region:133092-138290:1
so has part: feature:133092-133145:1:exon
so has part: feature:133316-133501:1:exon
so has part: feature:133899-134004:1:exon
so has part: feature:134092-134282:1:exon
so has part: feature:134376-134606:1:exon
so has part: feature:134694-134797:1:exon
so has part: feature:134907-135035:1:exon
so has part: feature:135418-135639:1:exon
so has part: feature:135713-135785:1:exon
so has part: feature:136214-136352:1:exon
so has part: feature:136445-136490:1:exon
so has part: feature:136943-137066:1:exon
so has part: feature:137208-137381:1:exon
so has part: feature:137559-137650:1:exon
so has part: feature:137811-137991:1:exon
so has part: feature:138222-138290:1:exon

XP_030307226.1
type: Protein
SIO_000068: ncbiprotein

position:133092:1
position: 133092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138290:1
position: 138290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133092-133145:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133316-133501:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133899-134004:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134092-134282:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134376-134606:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:134694-134797:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:134907-135035:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:135418-135639:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:135713-135785:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:136214-136352:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:136445-136490:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:136943-137066:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:137208-137381:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:137559-137650:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:137811-137991:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:138222-138290:1:exon

SSRP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SSRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FACT complex subunit SSRP1
translation: MADTLEFNEIYQEVKGSMNDGRLRLSRQGVIFKNSKTGKVDNIQASELAEGVWRRVALGHGLKLLTKNGHVYKYDGFRESEFDKLSEFFRAHYRLELAERDLCVKGWNWGTVRFGGQLLSFDIGEQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEAFAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFIYVHKPPVHIRFDEIAFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNAKKLNIKNRGLKEGMKQSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDGSGEETDESFNPGEEDDDVAEEFDSNASASSSSGEGDSDRGEKKPAKKVKVAKERKPRKKQQESKKGGKDPHAPKRPMSAYMLWLNASRERIKSDHPGISITDLSKKAGELWKAMSKEKKEEWDRKAEDARRDYEKAMKEYSGGSRSESSRGERSKKKKKKQEKQVRGRGERKVPPRPAASSKSPAKSGSESFKSKEFVSSDESSSAESKKEDSEEEGAASPPPSSEDSASGSD
SIO_010081: SSRP1
subclass of: SO_0000673
so part of: SSRP1
location: join(133092..133145,133316..133501,133899..134004,134092..134282,134376..134606,134694..134797,134907..135035,135418..135639,135713..135785,136214..136352,136445..136490,136943..137066,137208..137381,137559..137650,137811..137991,138222..138290)
location: region:133092-138290:1
so has part: feature:133092-133145:1:exon
so has part: feature:133316-133501:1:exon
so has part: feature:133899-134004:1:exon
so has part: feature:134092-134282:1:exon
so has part: feature:134376-134606:1:exon
so has part: feature:134694-134797:1:exon
so has part: feature:134907-135035:1:exon
so has part: feature:135418-135639:1:exon
so has part: feature:135713-135785:1:exon
so has part: feature:136214-136352:1:exon
so has part: feature:136445-136490:1:exon
so has part: feature:136943-137066:1:exon
so has part: feature:137208-137381:1:exon
so has part: feature:137559-137650:1:exon
so has part: feature:137811-137991:1:exon
so has part: feature:138222-138290:1:exon

XP_030307227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133092-133145:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133316-133501:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133899-134004:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134092-134282:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134376-134606:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:134694-134797:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:134907-135035:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:135418-135639:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:135713-135785:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:136214-136352:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:136445-136490:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:136943-137066:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:137208-137381:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:137559-137650:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:137811-137991:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:138222-138290:1:exon

TNKS1BP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: TNKS1BP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 139664..149222
location: region:139664-149222:1
so has part: feature:139664-149222:1:exon
subclass of: SO_0000010

103539532
type: Gene
SIO_000068: ncbigene

position:139664:1
position: 139664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149222:1
position: 149222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139664-149222:1:exon

TNKS1BP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TNKS1BP1
product: tankyrase 1 binding protein 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030451365.1
SIO_010081: TNKS1BP1
subclass of: SO_0000673
so part of: TNKS1BP1
location: join(139664..139805,140268..140395,140532..141175,141793..141865,142621..143847,144059..146643,147128..147437,147819..147951,148035..148174,148320..148486,148667..148731,148979..149222)
location: region:139664-149222:1
so has part: feature:139664-139805:1:exon
so has part: feature:140268-140395:1:exon
so has part: feature:140532-141175:1:exon
so has part: feature:141793-141865:1:exon
so has part: feature:142621-143847:1:exon
so has part: feature:144059-146643:1:exon
so has part: feature:147128-147437:1:exon
so has part: feature:147819-147951:1:exon
so has part: feature:148035-148174:1:exon
so has part: feature:148320-148486:1:exon
so has part: feature:148667-148731:1:exon
so has part: feature:148979-149222:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:139664-139805:1:exon

position:139805:1
position: 139805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:140268-140395:1:exon

position:140268:1
position: 140268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140395:1
position: 140395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:140532-141175:1:exon

position:140532:1
position: 140532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141175:1
position: 141175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:141793-141865:1:exon

position:141793:1
position: 141793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141865:1
position: 141865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:142621-143847:1:exon

position:142621:1
position: 142621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143847:1
position: 143847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:144059-146643:1:exon

position:144059:1
position: 144059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146643:1
position: 146643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:147128-147437:1:exon

position:147128:1
position: 147128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147437:1
position: 147437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:147819-147951:1:exon

position:147819:1
position: 147819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147951:1
position: 147951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:148035-148174:1:exon

position:148035:1
position: 148035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148174:1
position: 148174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:148320-148486:1:exon

position:148320:1
position: 148320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148486:1
position: 148486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:148667-148731:1:exon

position:148667:1
position: 148667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148731:1
position: 148731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:148979-149222:1:exon

position:148979:1
position: 148979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TNKS1BP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TNKS1BP1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: 182 kDa tankyrase-1-binding protein
translation: MASQPQPLCPTVPCASPTGTGGGGLASSSPERGSARPKPPLRPKPRVLPKPAVPTKPPLAQPPPAPRNPRPELPSAEKMNRLAGPQPYSGGGAGGLLRRPSFTFRGPETPIGKGXPCPPLVTAAEDCSLSLLEGVPPAPLTPSRKGPAPFKVTPVPVATKPERFPGTTVEEILAKMEREDPGSPERAHLFPFCPDPSSRFGSKTFSAFRRRPSGEGDRAPPEEAPLTPLPTAGKPGTRDEGCPIVKTSSSPPTGLGCAGDPCGQWRPPSPPDLSSLQPGTLGPPGSPRTPTCLAPAPAPGAPFQPAKPSTSAPGSPDPPPELPAPGLPTLAPSSSEPPAQPPPGIPAPGAPFSSTQPRHGASHSPGSPHTPGEGSPDTSSPPGTPELPPRVTCPPGSPEAATEPPVSPSPPPEPSATASCPPGSPEGPNDSLVFPKGPDSSPPAPSQHSGHRHSSEGALQPPPVGQGLERLRGSLSTLPCPGDPLPDTHLGSSFSWSLSQSFEWTSPSQETQQLASPPCYPIPETTNPGLSEEGESDGGDWAPRPLCSQGDSSFERPGPTVGAPGPGGPVAQQEAGGLGDEGEAEGGVTLSHSPLDVTEPIQDPAQPQPPAEEGQDLPDQDPPAPTTPTDCPSILQDPGVPGQAEGPSRNPDPHGDPGWLMELLASPGPPSTGHGSVKAPEGLLGWSRKDLCSAFGIGRPAQPGAFDWTHRAAGREGDWPSRTQRHQELRTQPGWDGTRHPGEGDHQDWGSDGRGRGLGCSDWSQPPGAVESGDPQDQEFGAGKPKWGTSYGSGEQSGCRKADWSHSQQQDQETSSRQSSWAGGFSSGDPESRDRDVTPGWAGEYGSGDVGMKERELTPAWASKYSSRDTKTEDFTLGWAGRSSTGDTGTPEKEFSPSRAAWDSRYSTQDMESQDREFSPSRPAQAGDYSTQDMESQDKEFCPSRPAEDSENSSRDVETQAGDFTRRRSTWDNGYNSRDTENQDRDFKANRPTWDDGSRSEDVESQDRDFTPSRPAWDDGPSTMDLETQDRDFIAIRPSWDDGSRSRELETQDRDFKESRPSWDDGSSTRDVETQDRDFKESRPSWDDGSSTRDVETQDRDFKESRPSWDDGSSTRDVETQDRDFKESRPSWDDGSSTRDVDDQDSGFRPNRPVWDVEYSTRVVETQDKELKPSRPAWDNKYRGQDLESQDLEFSPSRAAAASEDSRGDVGTRDGELSSNRQAWGDGCSSREVESQNQEFSPRQAAEASEQSSRDMESQDGDFTPSREAWDDGANTRDTDNQERDFTPSRAAWSEGYSTQDMESQDREFSPSRRTRDSQDTSGEGGTWGGVFNPNRMTWEGGYRNRGTESQDQEFGPSRPAWPSQLSSGSTVLAAGGFSAARQSWAGEQGGVQAGLDGTLGVGKDNVPIPLALELGWGSTRPQDWAEGPGGAELGVTGTERELDPSRTILGGSVPWAGGVGAGGLPEPLGGWGRGLSFSSSEGAGLVDPGWSQELGGAMGGTEPQDTEAKRREWAEAFGARCAARNRDRGEQSPGGNSGTTRGSTLDPSLLEGETPAAPPAMEHPQSESPSPTEERDVSEMAAAPPSPPASPLLPRTAGDTLPDMESQGVPLDHPDGKSTPSGEEEGLPQPEGPPDHTRQEFTFLEDTEVLDSRLYRSKANLGRQRSPRPPALRPAATPPGDSWIFRDSTDPRPCPPAVSSDEEAVEEPQSRRARGSPLGRGVRVPLFPGLSTSALKAKLRGRNRSVEEGASAGDSKATPPRDPHVQRSKSCKIPSWSGRPPALPPKLERSSGSDSSPPHWLQALKLKKKKP
SIO_010081: TNKS1BP1
subclass of: SO_0000673
so part of: TNKS1BP1
location: join(140299..140395,140532..141175,141793..141865,142621..143847,144059..146643,147128..147437,147819..147951,148035..148174,148320..148486,148667..148727)
location: region:140299-148727:1
so has part: feature:140299-140395:1:exon
so has part: feature:140532-141175:1:exon
so has part: feature:141793-141865:1:exon
so has part: feature:142621-143847:1:exon
so has part: feature:144059-146643:1:exon
so has part: feature:147128-147437:1:exon
so has part: feature:147819-147951:1:exon
so has part: feature:148035-148174:1:exon
so has part: feature:148320-148486:1:exon
so has part: feature:148667-148727:1:exon

XP_030307225.1
type: Protein
SIO_000068: ncbiprotein

position:140299:1
position: 140299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148727:1
position: 148727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140299-140395:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140532-141175:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:141793-141865:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:142621-143847:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:144059-146643:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:147128-147437:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:147819-147951:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:148035-148174:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:148320-148486:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:148667-148727:1:exon

APLNR
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: APLNR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 151362..152763
location: region:151362-152763:1
so has part: feature:151362-152763:1:exon
subclass of: SO_0000010

103539534
type: Gene
SIO_000068: ncbigene

position:151362:1
position: 151362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152763:1
position: 152763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151362-152763:1:exon

APLNR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: APLNR
product: apelin receptor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030451375.1
SIO_010081: APLNR
subclass of: SO_0000673
so part of: APLNR
location: 151362..152763
location: region:151362-152763:1
so has part: feature:151362-152763:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:151362-152763:1:exon

APLNR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: APLNR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apelin receptor
translation: MEEAADAYAYGENETECEYTEWGPSLALLPTIYLLVFLLGTAGNGLVLWTVFKGGRDRRRSADTFIANLAGADLTFVATLPLWAAYAWLGYHWPFGTAACKVSSYLVFVNMYASVFCLTGLSFDRYLAIVRPLATAKLRSRVSGLVATVALWVLAALLALPALVLRRAAALGGDSKITCYMDYGGLAAPGTEVAWEVGLGLSSTALGFVAPFAVMLTCYFFIARTVATHFRRERAEGPRKRKRLLTIITVLVAAFGGCWLPFHLVKTLYVLMDLEVLPWSCGLHAFLNNLHPYCTSIAYVNSCLNPFLYAFFDPRFRHACAALLCCRTPGTGTDRSASYSSGHSHPPGGKGGPGLGGKLDPTTQETLFRA
SIO_010081: APLNR
subclass of: SO_0000673
so part of: APLNR
location: 151406..152518
location: region:151406-152518:1
so has part: feature:151406-152518:1:exon

XP_030307235.1
type: Protein
SIO_000068: ncbiprotein

position:151406:1
position: 151406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152518:1
position: 152518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151406-152518:1:exon

LRRC55
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LRRC55
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(157483..159221)
location: region:157483-159221:-1
so has part: feature:157483-159221:-1:exon
subclass of: SO_0000010

103539535
type: Gene
SIO_000068: ncbigene

position:157483:-1
position: 157483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159221:-1
position: 159221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157483-159221:-1:exon

LRRC55
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LRRC55
product: leucine rich repeat containing 55
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_030451509.1
SIO_010081: LRRC55
subclass of: SO_0000673
so part of: LRRC55
location: complement(join(157483..157718,158254..158888,159147..159221))
location: region:157483-159221:-1
so has part: feature:159147-159221:-1:exon
so has part: feature:158254-158888:-1:exon
so has part: feature:157483-157718:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:159147-159221:-1:exon

position:159147:-1
position: 159147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:158254-158888:-1:exon

position:158254:-1
position: 158254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158888:-1
position: 158888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:157483-157718:-1:exon

position:157718:-1
position: 157718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRRC55
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LRRC55
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: leucine-rich repeat-containing protein 55
translation: MVYGYHDVWLPRCVATTVCGYHNLWGPPGTPAMLLGPWLVAAAAVAAAGSGGGCPALCACGGQAVDCSGRRLFSVPPELPPDTGNLSLAHNRLGSIPPGYLGCQTQLRALDLRNNSLPGLPAGLFRGARRLAHLDLSYNNLSLLPADMFLGASGLQRLDLSHNPGLRRLHPQAFRGLPQLRELDLSYGGLAAISLEALEGLPGLVGLRLGGNPWVCGCAMEPFLKWLRGRIQRCASDPQLAECRAPPEVAGAPLLSLTEESFQACHLTLTLDDYLFIAFVGFVVSIASVATNFLLGITANCCHRWSKASEDEDV
SIO_010081: LRRC55
subclass of: SO_0000673
so part of: LRRC55
location: complement(join(157483..157718,158254..158888,159147..159221))
location: region:157483-159221:-1
so has part: feature:159147-159221:-1:exon
so has part: feature:158254-158888:-1:exon
so has part: feature:157483-157718:-1:exon

XP_030307369.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:159147-159221:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158254-158888:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:157483-157718:-1:exon

LOC103539536
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103539536
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(164002..176358)
location: region:164002-176358:-1
so has part: feature:164002-176358:-1:exon
subclass of: SO_0000010

103539536
type: Gene
SIO_000068: ncbigene

position:164002:-1
position: 164002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176358:-1
position: 176358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164002-176358:-1:exon

LOC103539536
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103539536
product: inner centromere protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030451510.1
SIO_010081: LOC103539536
subclass of: SO_0000673
so part of: LOC103539536
location: complement(join(164002..164307,164417..164570,165710..165823,166104..166211,167087..167159,167268..167392,167690..167800,168252..168363,168655..168764,169303..169314,169789..169923,169999..170131,170805..170883,171533..171632,171720..171753,172223..172274,173332..173960,175800..175913,176222..176358))
location: region:164002-176358:-1
so has part: feature:176222-176358:-1:exon
so has part: feature:175800-175913:-1:exon
so has part: feature:173332-173960:-1:exon
so has part: feature:172223-172274:-1:exon
so has part: feature:171720-171753:-1:exon
so has part: feature:171533-171632:-1:exon
so has part: feature:170805-170883:-1:exon
so has part: feature:169999-170131:-1:exon
so has part: feature:169789-169923:-1:exon
so has part: feature:169303-169314:-1:exon
so has part: feature:168655-168764:-1:exon
so has part: feature:168252-168363:-1:exon
so has part: feature:167690-167800:-1:exon
so has part: feature:167268-167392:-1:exon
so has part: feature:167087-167159:-1:exon
so has part: feature:166104-166211:-1:exon
so has part: feature:165710-165823:-1:exon
so has part: feature:164417-164570:-1:exon
so has part: feature:164002-164307:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:176222-176358:-1:exon

position:176222:-1
position: 176222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:175800-175913:-1:exon

position:175800:-1
position: 175800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175913:-1
position: 175913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:173332-173960:-1:exon

position:173332:-1
position: 173332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173960:-1
position: 173960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:172223-172274:-1:exon

position:172223:-1
position: 172223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172274:-1
position: 172274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:171720-171753:-1:exon

position:171720:-1
position: 171720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171753:-1
position: 171753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:171533-171632:-1:exon

position:171533:-1
position: 171533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171632:-1
position: 171632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:170805-170883:-1:exon

position:170805:-1
position: 170805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170883:-1
position: 170883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:169999-170131:-1:exon

position:169999:-1
position: 169999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170131:-1
position: 170131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:169789-169923:-1:exon

position:169789:-1
position: 169789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169923:-1
position: 169923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:169303-169314:-1:exon

position:169303:-1
position: 169303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169314:-1
position: 169314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:168655-168764:-1:exon

position:168655:-1
position: 168655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168764:-1
position: 168764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:168252-168363:-1:exon

position:168252:-1
position: 168252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168363:-1
position: 168363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:167690-167800:-1:exon

position:167690:-1
position: 167690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167800:-1
position: 167800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:167268-167392:-1:exon

position:167268:-1
position: 167268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167392:-1
position: 167392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:167087-167159:-1:exon

position:167087:-1
position: 167087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167159:-1
position: 167159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:166104-166211:-1:exon

position:166104:-1
position: 166104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166211:-1
position: 166211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:165710-165823:-1:exon

position:165710:-1
position: 165710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165823:-1
position: 165823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:164417-164570:-1:exon

position:164417:-1
position: 164417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164570:-1
position: 164570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:164002-164307:-1:exon

position:164307:-1
position: 164307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103539536
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103539536
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inner centromere protein
translation: MAEADGPRRLLEVCGLRLARFLRDAEHKHLAWLREVEEQGMRMLDSNFGAEPELMPKTPSQRRRPKKRQSCSLKDEHKELNRRRLSRRRSSSKLVSSKPSSQKHHSKEQTQDPVGQGEEVEVPHCARESQSKELPALARKGLAEGPVVRLECQDCPQAVEGDAAPELHNVSSAASIPGGPTARGEKVEAPKRRASTSTPKAARNGDPAELQGDGSDGSPQGLEEVLFQDPESKTSTARSRRRRRSSCRSRGASLAEKCSLASKREGMIRRSISRAMSKKAAGRESSSASSRVSCQSSLEVFVEEDVTSSTRPALQLHPPSEEAPEHIPIPNKGIGAASLSAQHLPPPEQQAGSSEGSCVNPNSQSQEQPPCTTSQENPSRIWTRSCDRGVSVVWDGHQPGGRPLSLLDEKHKNSANQAPLSSPANKVVRPLKNFLQAVQRTQLLASPGSAGRVGAIKNFIKHSTPTRPDMKGDFVSKERQRLESLRKKQEAEEQRRKKVEEEKRRRQAEMKQKREERLRKALQARERVEQMEEEKKKRMEQKILQSDEKVWLSQAREERVAEEQSKKKLSKKQRDAEGWKQKVPSTDEFEQQEPLQKRREDEVKGKGKRVLELKKLVEQRQVEQAKERHHKPRGKEKPLQPGPAMLTEKPIKEEVSPKELHQLPGQEKKAKQPECIAVAPNPWLRVVKQEEDGLQDPRQPLGEEKKIKQPAAFTAAPGTQLSTTLKKSSSTSCLRPPKGTEDSRSPKGNENYGMDLNSDDSTDDEDDPRKPVPAWADGTQLNQVILLQYYHPISVDQLFGLIPRPKLEDIFGKSKPRYFKRTSSAVWHSPPGTRSTCGPSCNFQN
SIO_010081: LOC103539536
subclass of: SO_0000673
so part of: LOC103539536
location: complement(join(164102..164307,164417..164570,165710..165823,166104..166211,167087..167159,167268..167392,167690..167800,168252..168363,168655..168764,169303..169314,169789..169923,169999..170131,170805..170883,171533..171632,171720..171753,172223..172274,173332..173960,175800..175913,176222..176358))
location: region:164102-176358:-1
so has part: feature:176222-176358:-1:exon
so has part: feature:175800-175913:-1:exon
so has part: feature:173332-173960:-1:exon
so has part: feature:172223-172274:-1:exon
so has part: feature:171720-171753:-1:exon
so has part: feature:171533-171632:-1:exon
so has part: feature:170805-170883:-1:exon
so has part: feature:169999-170131:-1:exon
so has part: feature:169789-169923:-1:exon
so has part: feature:169303-169314:-1:exon
so has part: feature:168655-168764:-1:exon
so has part: feature:168252-168363:-1:exon
so has part: feature:167690-167800:-1:exon
so has part: feature:167268-167392:-1:exon
so has part: feature:167087-167159:-1:exon
so has part: feature:166104-166211:-1:exon
so has part: feature:165710-165823:-1:exon
so has part: feature:164417-164570:-1:exon
so has part: feature:164102-164307:-1:exon

XP_030307370.1
type: Protein
SIO_000068: ncbiprotein

position:164102:-1
position: 164102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176222-176358:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:175800-175913:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:173332-173960:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:172223-172274:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:171720-171753:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:171533-171632:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:170805-170883:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:169999-170131:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:169789-169923:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:169303-169314:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:168655-168764:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:168252-168363:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:167690-167800:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:167268-167392:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:167087-167159:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:166104-166211:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:165710-165823:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:164417-164570:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:164102-164307:-1:exon

INCENP
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: INCENP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 176987..191266
location: region:176987-191266:1
so has part: feature:176987-191266:1:exon
subclass of: SO_0000010

103539537
type: Gene
SIO_000068: ncbigene

position:176987:1
position: 176987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191266:1
position: 191266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176987-191266:1:exon

INCENP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: INCENP
product: inner centromere protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030451511.1
SIO_010081: INCENP
subclass of: SO_0000673
so part of: INCENP
location: join(176987..177120,177234..177347,178210..178961,180516..180567,180734..180767,182677..182755,183304..183355,183666..183783,183872..184006,185863..185972,186329..186449,187181..187303,187809..187981,188251..188341,190021..190180,190810..191266)
location: region:176987-191266:1
so has part: feature:176987-177120:1:exon
so has part: feature:177234-177347:1:exon
so has part: feature:178210-178961:1:exon
so has part: feature:180516-180567:1:exon
so has part: feature:180734-180767:1:exon
so has part: feature:182677-182755:1:exon
so has part: feature:183304-183355:1:exon
so has part: feature:183666-183783:1:exon
so has part: feature:183872-184006:1:exon
so has part: feature:185863-185972:1:exon
so has part: feature:186329-186449:1:exon
so has part: feature:187181-187303:1:exon
so has part: feature:187809-187981:1:exon
so has part: feature:188251-188341:1:exon
so has part: feature:190021-190180:1:exon
so has part: feature:190810-191266:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:176987-177120:1:exon

position:177120:1
position: 177120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:177234-177347:1:exon

position:177234:1
position: 177234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177347:1
position: 177347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:178210-178961:1:exon

position:178210:1
position: 178210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178961:1
position: 178961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:180516-180567:1:exon

position:180516:1
position: 180516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180567:1
position: 180567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:180734-180767:1:exon

position:180734:1
position: 180734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180767:1
position: 180767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:182677-182755:1:exon

position:182677:1
position: 182677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182755:1
position: 182755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:183304-183355:1:exon

position:183304:1
position: 183304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183355:1
position: 183355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:183666-183783:1:exon

position:183666:1
position: 183666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183783:1
position: 183783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:183872-184006:1:exon

position:183872:1
position: 183872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184006:1
position: 184006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:185863-185972:1:exon

position:185863:1
position: 185863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185972:1
position: 185972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:186329-186449:1:exon

position:186329:1
position: 186329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186449:1
position: 186449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:187181-187303:1:exon

position:187181:1
position: 187181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187303:1
position: 187303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:187809-187981:1:exon

position:187809:1
position: 187809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187981:1
position: 187981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:188251-188341:1:exon

position:188251:1
position: 188251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188341:1
position: 188341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:190021-190180:1:exon

position:190021:1
position: 190021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190180:1
position: 190180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:190810-191266:1:exon

position:190810:1
position: 190810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

INCENP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: INCENP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inner centromere protein
translation: MAAAGPAALPALCSRRLGEFLRQVDDTDLLWLEEIREEAARMFSSHYSDEPELMPKTPSQKNRQRRKRLSVLQEESQEPGRKRLSRRRNSSARRASQRLRNKETLELIRAEVKQVSPPRRVTRSQAAASAEVPGLLPKPLAAPQHLPCVKINASDCASAELYLQKSTAEEPSIPILSSSDDDSPQETGVAKSPPVPTAPELLVPSTPQADNRAGSSKAAPKLEAAQAVNTTFILSEESGLEGAGGPAEVEEVSVVEPPQPLRDNPPTPTGSRRSRRSVRRSLMGKTSLTHRTSLAEKYSLASKRESMTRKSITRATAKRRTAHQSSVASSSVDASSSGEVAEEEETVLRPGLPPGPCTPSKQNPQSPRLSLRSPTVSRNEQQQETDNNESNSKKSGETQEPPQSARRKPSYKRAVDERYDNQQAEEGGLSPLRRKTPSPTFPASKVVRPFKTFLHTVQKNQLLMTPSSVGRNGVIKSFIRYNTPLQSDPKEKERQKLETLRKKQEAEQLRKQKLEEEKKRRLEEARLKREERLLKVLQARERAEQIEEERKRRIERKIALFDEKTEKVREERLAEEKIRKRAAAKKMEEAEARRRQDEEARKLKALQQEEEERRHKELMLKRKEEEQERARKIAEQRQAEQEREKQLAAERELERKREKERIQAERLREQQENAARLQKEVLAAKGQLHKEMEKKENSPAVTSYQMTPQAQKAPKLPIINPNNYGMDLNSDDSTDDESHPRKPIPAWATGHLLIQAVARQYHKPPNVDALFGVIPSPKLEDIFYKSKPRYFKRTSSAVWSSPPFPAAKVVLGLPCGPKMY
SIO_010081: INCENP
subclass of: SO_0000673
so part of: INCENP
location: join(176987..177120,177234..177347,178210..178961,180516..180567,180734..180767,182677..182755,183304..183355,183666..183783,183872..184006,185863..185972,186329..186449,187181..187303,187809..187981,188251..188341,190021..190180,190810..191024)
location: region:176987-191024:1
so has part: feature:176987-177120:1:exon
so has part: feature:177234-177347:1:exon
so has part: feature:178210-178961:1:exon
so has part: feature:180516-180567:1:exon
so has part: feature:180734-180767:1:exon
so has part: feature:182677-182755:1:exon
so has part: feature:183304-183355:1:exon
so has part: feature:183666-183783:1:exon
so has part: feature:183872-184006:1:exon
so has part: feature:185863-185972:1:exon
so has part: feature:186329-186449:1:exon
so has part: feature:187181-187303:1:exon
so has part: feature:187809-187981:1:exon
so has part: feature:188251-188341:1:exon
so has part: feature:190021-190180:1:exon
so has part: feature:190810-191024:1:exon

XP_030307371.1
type: Protein
SIO_000068: ncbiprotein

position:191024:1
position: 191024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176987-177120:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:177234-177347:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:178210-178961:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:180516-180567:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:180734-180767:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:182677-182755:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:183304-183355:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:183666-183783:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:183872-184006:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:185863-185972:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:186329-186449:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:187181-187303:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:187809-187981:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:188251-188341:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:190021-190180:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:190810-191024:1:exon

ODF3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ODF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 197137..199243
location: region:197137-199243:1
so has part: feature:197137-199243:1:exon
subclass of: SO_0000010

103539538
type: Gene
SIO_000068: ncbigene

position:197137:1
position: 197137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199243:1
position: 199243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197137-199243:1:exon

ODF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ODF3
product: outer dense fiber of sperm tails 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 34% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008506048.1
SIO_010081: ODF3
subclass of: SO_0000673
so part of: ODF3
location: join(197137..197242,197563..197763,197952..198050,198270..198391,198912..199052,199157..199243)
location: region:197137-199243:1
so has part: feature:197137-197242:1:exon
so has part: feature:197563-197763:1:exon
so has part: feature:197952-198050:1:exon
so has part: feature:198270-198391:1:exon
so has part: feature:198912-199052:1:exon
so has part: feature:199157-199243:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:197137-197242:1:exon

position:197242:1
position: 197242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:197563-197763:1:exon

position:197563:1
position: 197563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197763:1
position: 197763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:197952-198050:1:exon

position:197952:1
position: 197952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198050:1
position: 198050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:198270-198391:1:exon

position:198270:1
position: 198270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198391:1
position: 198391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:198912-199052:1:exon

position:198912:1
position: 198912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199052:1
position: 199052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:199157-199243:1:exon

position:199157:1
position: 199157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ODF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ODF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: outer dense fiber protein 3
translation: MDGPWVGTWRPHRPLGPVVAQFTTPGPKYSIPGTTGYLCHNPCKTKAPAYTFQGAKHPNAESCSPGPRYYIHPSITRNGKYLAPAVPMAGAPKAKIEVTPGPSDYFTERANKLLYRRAPAQSMSFRHEVKPALVPGPGAYTLPRVVGPNTVYTPASPCYSMGGKSKHNSYADDLAKTPGPAAYPKVELDIYNRRAPTYTMGTKTSFGLRPTVTPGPADYSLGKVTLTKPQAPAFTFGLRHSPYTAAAIPLI
SIO_010081: ODF3
subclass of: SO_0000673
so part of: ODF3
location: join(197137..197242,197563..197763,197952..198050,198270..198391,198912..199052,199157..199243)
location: region:197137-199243:1
so has part: feature:197137-197242:1:exon
so has part: feature:197563-197763:1:exon
so has part: feature:197952-198050:1:exon
so has part: feature:198270-198391:1:exon
so has part: feature:198912-199052:1:exon
so has part: feature:199157-199243:1:exon

XP_008504270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197137-197242:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197563-197763:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197952-198050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:198270-198391:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:198912-199052:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:199157-199243:1:exon

VPS51
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: VPS51
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(200288..206489)
location: region:200288-206489:-1
so has part: feature:200288-206489:-1:exon
subclass of: SO_0000010

103539539
type: Gene
SIO_000068: ncbigene

position:200288:-1
position: 200288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206489:-1
position: 206489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200288-206489:-1:exon

VPS51
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: VPS51
product: VPS51 subunit of GARP complex
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030451421.1
SIO_010081: VPS51
subclass of: SO_0000673
so part of: VPS51
location: complement(join(200288..200932,201505..201592,201976..202097,202440..202661,202938..203155,203546..204293,204741..204963,205471..205617,205707..205836,206292..206489))
location: region:200288-206489:-1
so has part: feature:206292-206489:-1:exon
so has part: feature:205707-205836:-1:exon
so has part: feature:205471-205617:-1:exon
so has part: feature:204741-204963:-1:exon
so has part: feature:203546-204293:-1:exon
so has part: feature:202938-203155:-1:exon
so has part: feature:202440-202661:-1:exon
so has part: feature:201976-202097:-1:exon
so has part: feature:201505-201592:-1:exon
so has part: feature:200288-200932:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:206292-206489:-1:exon

position:206292:-1
position: 206292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:205707-205836:-1:exon

position:205707:-1
position: 205707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205836:-1
position: 205836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:205471-205617:-1:exon

position:205471:-1
position: 205471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205617:-1
position: 205617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:204741-204963:-1:exon

position:204741:-1
position: 204741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204963:-1
position: 204963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:203546-204293:-1:exon

position:203546:-1
position: 203546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204293:-1
position: 204293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:202938-203155:-1:exon

position:202938:-1
position: 202938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203155:-1
position: 203155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:202440-202661:-1:exon

position:202440:-1
position: 202440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202661:-1
position: 202661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:201976-202097:-1:exon

position:201976:-1
position: 201976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202097:-1
position: 202097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:201505-201592:-1:exon

position:201505:-1
position: 201505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201592:-1
position: 201592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:200288-200932:-1:exon

position:200932:-1
position: 200932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VPS51
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: VPS51
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 51 homolog
translation: MAEEEAVGTGPGGSPDPGTGTGSGWRRPHGPLQRYYGPSAAEAAEAAPDPADINGPNFDPEVYLTKVRSECPLGQLLAREAALGREIRALDSDMQTLLYENYNKFISATDTIRKMKVDFRRMEAEMDDLAANMAAISTSSARVSAALQEGHRRGAQLAGVQALLRKLQSLVEVPGRLRRWAAPGGDPGRALRCYGRARAVLRHYRHLPSFRAIEDESQHIMADLAQRLRARLRDDTLDPKELTECVEMLLQLEEPPEELCQEFLCHAGARLEAELAALETELPAPAEPSGAAATPPPPASDILDFVDRGSSSFVGTLCLLASSYRSLFAGRAGAGDERLAAFSCALTARYFQLLERRLALERGLGDTSLLVRALDRFHRRLRALLELLPGAGAEAGAALVARAARERVERYLRALQTFFMGCLGDVRQALAAPRPPGKEGPGLPDLLATLASSVLGQLKAVLAYVQLFTARDVAFASLPYFKGEFCVEAVREGLVVSFVRWLCRTARGFADGPTERGAPAXPPALLLLLARLCLDYEATTISYILTLTDEQFPPQDTGLVVTPGSSLCAEARGAAQRLLDHYVQVQGAAVAQMLRKSVETRDWLGTVEPRNVRAVMKRVVEDITAIDLQVGQLLEEGVRRAQSSDSSRRAFSVYSSSRAPARYAPSYTPSAPMDTHLLSNIQKLFSERIDIFSPVEFNKVSVLTGIIKISLKTLLECVRLRTLGRFGLQQVQVDGHYLQLYLWRFAADERVVQGLLDEVAASATHRCLDPVPMEHSVVELICERG
SIO_010081: VPS51
subclass of: SO_0000673
so part of: VPS51
location: complement(join(200672..200932,201505..201592,201976..202097,202440..202661,202938..203155,203546..204293,204741..204963,205471..205617,205707..205836,206292..206489))
location: region:200672-206489:-1
so has part: feature:206292-206489:-1:exon
so has part: feature:205707-205836:-1:exon
so has part: feature:205471-205617:-1:exon
so has part: feature:204741-204963:-1:exon
so has part: feature:203546-204293:-1:exon
so has part: feature:202938-203155:-1:exon
so has part: feature:202440-202661:-1:exon
so has part: feature:201976-202097:-1:exon
so has part: feature:201505-201592:-1:exon
so has part: feature:200672-200932:-1:exon

XP_030307281.1
type: Protein
SIO_000068: ncbiprotein

position:200672:-1
position: 200672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206292-206489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:205707-205836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:205471-205617:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:204741-204963:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:203546-204293:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:202938-203155:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:202440-202661:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:201976-202097:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:201505-201592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:200672-200932:-1:exon

BET1L
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: BET1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(207082..210335)
location: region:207082-210335:-1
so has part: feature:207082-210335:-1:exon
subclass of: SO_0000010

103539491
type: Gene
SIO_000068: ncbigene

position:207082:-1
position: 207082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210335:-1
position: 210335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207082-210335:-1:exon

BET1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: BET1L
product: Bet1 golgi vesicular membrane trafficking protein like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030451234.1
SIO_010081: BET1L
subclass of: SO_0000673
so part of: BET1L
location: complement(join(207082..207750,208235..208291,208874..208965,210284..210335))
location: region:207082-210335:-1
so has part: feature:210284-210335:-1:exon
so has part: feature:208874-208965:-1:exon
so has part: feature:208235-208291:-1:exon
so has part: feature:207082-207750:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:210284-210335:-1:exon

position:210284:-1
position: 210284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:208874-208965:-1:exon

position:208874:-1
position: 208874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208965:-1
position: 208965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:208235-208291:-1:exon

position:208235:-1
position: 208235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208291:-1
position: 208291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:207082-207750:-1:exon

position:207750:-1
position: 207750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BET1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: BET1L
product: Bet1 golgi vesicular membrane trafficking protein like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030451235.1
SIO_010081: BET1L
subclass of: SO_0000673
so part of: BET1L
location: complement(join(207082..207750,208235..208291,208874..208965,209475..209680))
location: region:207082-209680:-1
so has part: feature:209475-209680:-1:exon
so has part: feature:208874-208965:-1:exon
so has part: feature:208235-208291:-1:exon
so has part: feature:207082-207750:-1:exon

position:209680:-1
position: 209680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209475-209680:-1:exon

position:209475:-1
position: 209475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:208874-208965:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:208235-208291:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:207082-207750:-1:exon

BET1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: BET1L
product: Bet1 golgi vesicular membrane trafficking protein like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_030451233.1
SIO_010081: BET1L
subclass of: SO_0000673
so part of: BET1L
location: complement(join(207082..207750,208235..208291,208874..208965,209406..209486))
location: region:207082-209486:-1
so has part: feature:209406-209486:-1:exon
so has part: feature:208874-208965:-1:exon
so has part: feature:208235-208291:-1:exon
so has part: feature:207082-207750:-1:exon

position:209486:-1
position: 209486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209406-209486:-1:exon

position:209406:-1
position: 209406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:208874-208965:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:208235-208291:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:207082-207750:-1:exon

BET1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: BET1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BET1-like protein isoform X2
translation: MLSDTGTGQSPDAMEDMLDVENKRMTDSLASKVTRLKALALDIDKDAEEQNRYLDGMDSDFLSVTGLLSGSVKRFSTVVRSGRDNRRLLCSVSAGLVLIFFILYYLVSRAGT
SIO_010081: BET1L
subclass of: SO_0000673
so part of: BET1L
location: complement(join(207583..207750,208235..208291,208874..208965,210284..210305))
location: region:207583-210305:-1
so has part: feature:210284-210305:-1:exon
so has part: feature:208874-208965:-1:exon
so has part: feature:208235-208291:-1:exon
so has part: feature:207583-207750:-1:exon

XP_030307094.1
type: Protein
SIO_000068: ncbiprotein

position:207583:-1
position: 207583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210305:-1
position: 210305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210284-210305:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:208874-208965:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:208235-208291:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:207583-207750:-1:exon

BET1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: BET1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BET1-like protein isoform X3
translation: MLCQSPDAMEDMLDVENKRMTDSLASKVTRLKALALDIDKDAEEQNRYLDGMDSDFLSVTGLLSGSVKRFSTVVRSGRDNRRLLCSVSAGLVLIFFILYYLVSRAGT
SIO_010081: BET1L
subclass of: SO_0000673
so part of: BET1L
location: complement(join(207583..207750,208235..208291,208874..208965,209475..209481))
location: region:207583-209481:-1
so has part: feature:209475-209481:-1:exon
so has part: feature:208874-208965:-1:exon
so has part: feature:208235-208291:-1:exon
so has part: feature:207583-207750:-1:exon

XP_030307095.1
type: Protein
SIO_000068: ncbiprotein

position:209481:-1
position: 209481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209475-209481:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:208874-208965:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:208235-208291:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:207583-207750:-1:exon

BET1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: BET1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BET1-like protein isoform X1
translation: MLCRRGWSGSARTGGAGAAMAEWGRGQSPDAMEDMLDVENKRMTDSLASKVTRLKALALDIDKDAEEQNRYLDGMDSDFLSVTGLLSGSVKRFSTVVRSGRDNRRLLCSVSAGLVLIFFILYYLVSRAGT
SIO_010081: BET1L
subclass of: SO_0000673
so part of: BET1L
location: complement(join(207583..207750,208235..208291,208874..208965,209406..209481))
location: region:207583-209481:-1
so has part: feature:209406-209481:-1:exon
so has part: feature:208874-208965:-1:exon
so has part: feature:208235-208291:-1:exon
so has part: feature:207583-207750:-1:exon

XP_030307093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:209406-209481:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:208874-208965:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:208235-208291:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:207583-207750:-1:exon

RIC8A
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: RIC8A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 209704..220651
location: region:209704-220651:1
so has part: feature:209704-220651:1:exon
subclass of: SO_0000010

103539492
type: Gene
SIO_000068: ncbigene

position:209704:1
position: 209704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220651:1
position: 220651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209704-220651:1:exon

RIC8A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RIC8A
product: RIC8 guanine nucleotide exchange factor A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 8 ESTs, 2 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030451228.1
SIO_010081: RIC8A
subclass of: SO_0000673
so part of: RIC8A
location: join(209704..209842,211018..211212,213547..213594,214717..215331,215891..215985,216426..216576,216962..217057,217696..217840,218044..218188,218513..218632,219128..220651)
location: region:209704-220651:1
so has part: feature:209704-209842:1:exon
so has part: feature:211018-211212:1:exon
so has part: feature:213547-213594:1:exon
so has part: feature:214717-215331:1:exon
so has part: feature:215891-215985:1:exon
so has part: feature:216426-216576:1:exon
so has part: feature:216962-217057:1:exon
so has part: feature:217696-217840:1:exon
so has part: feature:218044-218188:1:exon
so has part: feature:218513-218632:1:exon
so has part: feature:219128-220651:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:209704-209842:1:exon

position:209842:1
position: 209842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:211018-211212:1:exon

position:211018:1
position: 211018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211212:1
position: 211212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:213547-213594:1:exon

position:213547:1
position: 213547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213594:1
position: 213594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:214717-215331:1:exon

position:214717:1
position: 214717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215331:1
position: 215331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:215891-215985:1:exon

position:215891:1
position: 215891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215985:1
position: 215985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:216426-216576:1:exon

position:216426:1
position: 216426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216576:1
position: 216576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:216962-217057:1:exon

position:216962:1
position: 216962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217057:1
position: 217057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:217696-217840:1:exon

position:217696:1
position: 217696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217840:1
position: 217840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:218044-218188:1:exon

position:218044:1
position: 218044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218188:1
position: 218188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:218513-218632:1:exon

position:218513:1
position: 218513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218632:1
position: 218632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:219128-220651:1:exon

position:219128:1
position: 219128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RIC8A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RIC8A
product: RIC8 guanine nucleotide exchange factor A, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030451232.1
SIO_010081: RIC8A
subclass of: SO_0000673
so part of: RIC8A
location: join(209744..209842,211060..211212,213547..213594,214717..215331,215891..215985,216426..216576,216962..217057,217696..217840,218044..218188,218513..218632,219128..219248)
location: region:209744-219248:1
so has part: feature:209744-209842:1:exon
so has part: feature:211060-211212:1:exon
so has part: feature:213547-213594:1:exon
so has part: feature:214717-215331:1:exon
so has part: feature:215891-215985:1:exon
so has part: feature:216426-216576:1:exon
so has part: feature:216962-217057:1:exon
so has part: feature:217696-217840:1:exon
so has part: feature:218044-218188:1:exon
so has part: feature:218513-218632:1:exon
so has part: feature:219128-219248:1:exon

position:209744:1
position: 209744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219248:1
position: 219248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209744-209842:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:211060-211212:1:exon

position:211060:1
position: 211060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:213547-213594:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214717-215331:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215891-215985:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:216426-216576:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:216962-217057:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:217696-217840:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:218044-218188:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:218513-218632:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:219128-219248:1:exon

RIC8A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RIC8A
product: RIC8 guanine nucleotide exchange factor A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 7 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030451229.1
SIO_010081: RIC8A
subclass of: SO_0000673
so part of: RIC8A
location: join(209748..209842,210232..210555,211018..211212,213547..213594,214717..215331,215891..215985,216426..216576,216962..217057,217696..217840,218044..218188,218513..218632,219128..219248)
location: region:209748-219248:1
so has part: feature:209748-209842:1:exon
so has part: feature:210232-210555:1:exon
so has part: feature:211018-211212:1:exon
so has part: feature:213547-213594:1:exon
so has part: feature:214717-215331:1:exon
so has part: feature:215891-215985:1:exon
so has part: feature:216426-216576:1:exon
so has part: feature:216962-217057:1:exon
so has part: feature:217696-217840:1:exon
so has part: feature:218044-218188:1:exon
so has part: feature:218513-218632:1:exon
so has part: feature:219128-219248:1:exon

position:209748:1
position: 209748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209748-209842:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:210232-210555:1:exon

position:210232:1
position: 210232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210555:1
position: 210555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:211018-211212:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:213547-213594:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:214717-215331:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:215891-215985:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:216426-216576:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:216962-217057:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:217696-217840:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:218044-218188:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:218513-218632:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:219128-219248:1:exon

RIC8A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RIC8A
product: RIC8 guanine nucleotide exchange factor A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 7 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030451230.1
SIO_010081: RIC8A
subclass of: SO_0000673
so part of: RIC8A
location: join(209748..209842,210232..210353,210504..210555,211018..211212,213547..213594,214717..215331,215891..215985,216426..216576,216962..217057,217696..217840,218044..218188,218513..218632,219128..219248)
location: region:209748-219248:1
so has part: feature:209748-209842:1:exon
so has part: feature:210232-210353:1:exon
so has part: feature:210504-210555:1:exon
so has part: feature:211018-211212:1:exon
so has part: feature:213547-213594:1:exon
so has part: feature:214717-215331:1:exon
so has part: feature:215891-215985:1:exon
so has part: feature:216426-216576:1:exon
so has part: feature:216962-217057:1:exon
so has part: feature:217696-217840:1:exon
so has part: feature:218044-218188:1:exon
so has part: feature:218513-218632:1:exon
so has part: feature:219128-219248:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:209748-209842:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:210232-210353:1:exon

position:210353:1
position: 210353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:210504-210555:1:exon

position:210504:1
position: 210504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:211018-211212:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:213547-213594:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:214717-215331:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:215891-215985:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:216426-216576:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:216962-217057:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:217696-217840:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:218044-218188:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:218513-218632:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:219128-219248:1:exon

RIC8A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RIC8A
product: RIC8 guanine nucleotide exchange factor A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 7 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030451231.1
SIO_010081: RIC8A
subclass of: SO_0000673
so part of: RIC8A
location: join(209847..209898,211018..211212,213547..213594,214717..215331,215891..215985,216426..216576,216962..217057,217696..217840,218044..218188,218513..218632,219128..219248)
location: region:209847-219248:1
so has part: feature:209847-209898:1:exon
so has part: feature:211018-211212:1:exon
so has part: feature:213547-213594:1:exon
so has part: feature:214717-215331:1:exon
so has part: feature:215891-215985:1:exon
so has part: feature:216426-216576:1:exon
so has part: feature:216962-217057:1:exon
so has part: feature:217696-217840:1:exon
so has part: feature:218044-218188:1:exon
so has part: feature:218513-218632:1:exon
so has part: feature:219128-219248:1:exon

position:209847:1
position: 209847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209847-209898:1:exon

position:209898:1
position: 209898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:211018-211212:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:213547-213594:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214717-215331:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215891-215985:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:216426-216576:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:216962-217057:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:217696-217840:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:218044-218188:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:218513-218632:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:219128-219248:1:exon

RIC8A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RIC8A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synembryn-A
translation: MELRTVVATVESGEQDTVLKVLQVYNQEKSQCFIFDDEEREERKKMAQLLIKFLERELQPSCQVTCLESIRILSRDKHCLDPFATREGLKTLSRHAGIEYSEELIREVPDLDVILESLKCLCNIVFSSPRAQELTAEARLVVGLAKRIKLYNERSLPHQVKFFDLRLLFLLTALRVDIRQQLSQELRGISLMTDTLELTLGVKWMDPYEVATEEGLLPPLPRQETERAMEILKVLFNITFDSSKREVDEEDAALYRHLGALLRHCLMISADGEDRTEEFHSHTVNLLGNLPLKCLDVLLTPKVRPGSLEYMGVNMDAVSILLDFLERRLDRGHKLKESLTPVLNLLTESARVHRQTRKFLKVKVLPPLRDVRNRPEVGSSLRNKLVRLMTHIDTDVKHCAAEFLFVLCKESVSRFVKYTGYGNAAGLLAARGLMAGGREEGEYSEDEDTDTEEYKEAKPNINPVTGRVEEKLPNPMEGMTEEQKEYEAMKLVNMFDKLSREQVIQPMGITPSGNLAPMENAIRDMADERSSSDSDLGLD
SIO_010081: RIC8A
subclass of: SO_0000673
so part of: RIC8A
location: join(211129..211212,213547..213594,214717..215331,215891..215985,216426..216576,216962..217057,217696..217840,218044..218188,218513..218632,219128..219248)
location: region:211129-219248:1
so has part: feature:211129-211212:1:exon
so has part: feature:213547-213594:1:exon
so has part: feature:214717-215331:1:exon
so has part: feature:215891-215985:1:exon
so has part: feature:216426-216576:1:exon
so has part: feature:216962-217057:1:exon
so has part: feature:217696-217840:1:exon
so has part: feature:218044-218188:1:exon
so has part: feature:218513-218632:1:exon
so has part: feature:219128-219248:1:exon

XP_030307088.1
type: Protein
SIO_000068: ncbiprotein

position:211129:1
position: 211129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211129-211212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:213547-213594:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214717-215331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215891-215985:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:216426-216576:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:216962-217057:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:217696-217840:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:218044-218188:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:218513-218632:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:219128-219248:1:exon

RIC8A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RIC8A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synembryn-A
translation: MELRTVVATVESGEQDTVLKVLQVYNQEKSQCFIFDDEEREERKKMAQLLIKFLERELQPSCQVTCLESIRILSRDKHCLDPFATREGLKTLSRHAGIEYSEELIREVPDLDVILESLKCLCNIVFSSPRAQELTAEARLVVGLAKRIKLYNERSLPHQVKFFDLRLLFLLTALRVDIRQQLSQELRGISLMTDTLELTLGVKWMDPYEVATEEGLLPPLPRQETERAMEILKVLFNITFDSSKREVDEEDAALYRHLGALLRHCLMISADGEDRTEEFHSHTVNLLGNLPLKCLDVLLTPKVRPGSLEYMGVNMDAVSILLDFLERRLDRGHKLKESLTPVLNLLTESARVHRQTRKFLKVKVLPPLRDVRNRPEVGSSLRNKLVRLMTHIDTDVKHCAAEFLFVLCKESVSRFVKYTGYGNAAGLLAARGLMAGGREEGEYSEDEDTDTEEYKEAKPNINPVTGRVEEKLPNPMEGMTEEQKEYEAMKLVNMFDKLSREQVIQPMGITPSGNLAPMENAIRDMADERSSSDSDLGLD
SIO_010081: RIC8A
subclass of: SO_0000673
so part of: RIC8A
location: join(211129..211212,213547..213594,214717..215331,215891..215985,216426..216576,216962..217057,217696..217840,218044..218188,218513..218632,219128..219248)
location: region:211129-219248:1
so has part: feature:211129-211212:1:exon
so has part: feature:213547-213594:1:exon
so has part: feature:214717-215331:1:exon
so has part: feature:215891-215985:1:exon
so has part: feature:216426-216576:1:exon
so has part: feature:216962-217057:1:exon
so has part: feature:217696-217840:1:exon
so has part: feature:218044-218188:1:exon
so has part: feature:218513-218632:1:exon
so has part: feature:219128-219248:1:exon

XP_030307089.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211129-211212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:213547-213594:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214717-215331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215891-215985:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:216426-216576:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:216962-217057:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:217696-217840:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:218044-218188:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:218513-218632:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:219128-219248:1:exon

RIC8A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RIC8A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synembryn-A
translation: MELRTVVATVESGEQDTVLKVLQVYNQEKSQCFIFDDEEREERKKMAQLLIKFLERELQPSCQVTCLESIRILSRDKHCLDPFATREGLKTLSRHAGIEYSEELIREVPDLDVILESLKCLCNIVFSSPRAQELTAEARLVVGLAKRIKLYNERSLPHQVKFFDLRLLFLLTALRVDIRQQLSQELRGISLMTDTLELTLGVKWMDPYEVATEEGLLPPLPRQETERAMEILKVLFNITFDSSKREVDEEDAALYRHLGALLRHCLMISADGEDRTEEFHSHTVNLLGNLPLKCLDVLLTPKVRPGSLEYMGVNMDAVSILLDFLERRLDRGHKLKESLTPVLNLLTESARVHRQTRKFLKVKVLPPLRDVRNRPEVGSSLRNKLVRLMTHIDTDVKHCAAEFLFVLCKESVSRFVKYTGYGNAAGLLAARGLMAGGREEGEYSEDEDTDTEEYKEAKPNINPVTGRVEEKLPNPMEGMTEEQKEYEAMKLVNMFDKLSREQVIQPMGITPSGNLAPMENAIRDMADERSSSDSDLGLD
SIO_010081: RIC8A
subclass of: SO_0000673
so part of: RIC8A
location: join(211129..211212,213547..213594,214717..215331,215891..215985,216426..216576,216962..217057,217696..217840,218044..218188,218513..218632,219128..219248)
location: region:211129-219248:1
so has part: feature:211129-211212:1:exon
so has part: feature:213547-213594:1:exon
so has part: feature:214717-215331:1:exon
so has part: feature:215891-215985:1:exon
so has part: feature:216426-216576:1:exon
so has part: feature:216962-217057:1:exon
so has part: feature:217696-217840:1:exon
so has part: feature:218044-218188:1:exon
so has part: feature:218513-218632:1:exon
so has part: feature:219128-219248:1:exon

XP_030307090.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211129-211212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:213547-213594:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214717-215331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215891-215985:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:216426-216576:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:216962-217057:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:217696-217840:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:218044-218188:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:218513-218632:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:219128-219248:1:exon

RIC8A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RIC8A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synembryn-A
translation: MELRTVVATVESGEQDTVLKVLQVYNQEKSQCFIFDDEEREERKKMAQLLIKFLERELQPSCQVTCLESIRILSRDKHCLDPFATREGLKTLSRHAGIEYSEELIREVPDLDVILESLKCLCNIVFSSPRAQELTAEARLVVGLAKRIKLYNERSLPHQVKFFDLRLLFLLTALRVDIRQQLSQELRGISLMTDTLELTLGVKWMDPYEVATEEGLLPPLPRQETERAMEILKVLFNITFDSSKREVDEEDAALYRHLGALLRHCLMISADGEDRTEEFHSHTVNLLGNLPLKCLDVLLTPKVRPGSLEYMGVNMDAVSILLDFLERRLDRGHKLKESLTPVLNLLTESARVHRQTRKFLKVKVLPPLRDVRNRPEVGSSLRNKLVRLMTHIDTDVKHCAAEFLFVLCKESVSRFVKYTGYGNAAGLLAARGLMAGGREEGEYSEDEDTDTEEYKEAKPNINPVTGRVEEKLPNPMEGMTEEQKEYEAMKLVNMFDKLSREQVIQPMGITPSGNLAPMENAIRDMADERSSSDSDLGLD
SIO_010081: RIC8A
subclass of: SO_0000673
so part of: RIC8A
location: join(211129..211212,213547..213594,214717..215331,215891..215985,216426..216576,216962..217057,217696..217840,218044..218188,218513..218632,219128..219248)
location: region:211129-219248:1
so has part: feature:211129-211212:1:exon
so has part: feature:213547-213594:1:exon
so has part: feature:214717-215331:1:exon
so has part: feature:215891-215985:1:exon
so has part: feature:216426-216576:1:exon
so has part: feature:216962-217057:1:exon
so has part: feature:217696-217840:1:exon
so has part: feature:218044-218188:1:exon
so has part: feature:218513-218632:1:exon
so has part: feature:219128-219248:1:exon

XP_030307091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211129-211212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:213547-213594:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214717-215331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215891-215985:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:216426-216576:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:216962-217057:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:217696-217840:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:218044-218188:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:218513-218632:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:219128-219248:1:exon

RIC8A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RIC8A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synembryn-A
translation: MELRTVVATVESGEQDTVLKVLQVYNQEKSQCFIFDDEEREERKKMAQLLIKFLERELQPSCQVTCLESIRILSRDKHCLDPFATREGLKTLSRHAGIEYSEELIREVPDLDVILESLKCLCNIVFSSPRAQELTAEARLVVGLAKRIKLYNERSLPHQVKFFDLRLLFLLTALRVDIRQQLSQELRGISLMTDTLELTLGVKWMDPYEVATEEGLLPPLPRQETERAMEILKVLFNITFDSSKREVDEEDAALYRHLGALLRHCLMISADGEDRTEEFHSHTVNLLGNLPLKCLDVLLTPKVRPGSLEYMGVNMDAVSILLDFLERRLDRGHKLKESLTPVLNLLTESARVHRQTRKFLKVKVLPPLRDVRNRPEVGSSLRNKLVRLMTHIDTDVKHCAAEFLFVLCKESVSRFVKYTGYGNAAGLLAARGLMAGGREEGEYSEDEDTDTEEYKEAKPNINPVTGRVEEKLPNPMEGMTEEQKEYEAMKLVNMFDKLSREQVIQPMGITPSGNLAPMENAIRDMADERSSSDSDLGLD
SIO_010081: RIC8A
subclass of: SO_0000673
so part of: RIC8A
location: join(211129..211212,213547..213594,214717..215331,215891..215985,216426..216576,216962..217057,217696..217840,218044..218188,218513..218632,219128..219248)
location: region:211129-219248:1
so has part: feature:211129-211212:1:exon
so has part: feature:213547-213594:1:exon
so has part: feature:214717-215331:1:exon
so has part: feature:215891-215985:1:exon
so has part: feature:216426-216576:1:exon
so has part: feature:216962-217057:1:exon
so has part: feature:217696-217840:1:exon
so has part: feature:218044-218188:1:exon
so has part: feature:218513-218632:1:exon
so has part: feature:219128-219248:1:exon

XP_030307092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211129-211212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:213547-213594:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214717-215331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215891-215985:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:216426-216576:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:216962-217057:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:217696-217840:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:218044-218188:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:218513-218632:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:219128-219248:1:exon

SIRT3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SIRT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(220757..224598)
location: region:220757-224598:-1
so has part: feature:220757-224598:-1:exon
subclass of: SO_0000010

103539493
type: Gene
SIO_000068: ncbigene

position:220757:-1
position: 220757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224598:-1
position: 224598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220757-224598:-1:exon

SIRT3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SIRT3
product: sirtuin 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030451040.1
SIO_010081: SIRT3
subclass of: SO_0000673
so part of: SIRT3
location: complement(join(220757..221234,221557..221766,222161..222322,222451..222551,222643..222875,223101..223286,224098..224221,224584..224598))
location: region:220757-224598:-1
so has part: feature:224584-224598:-1:exon
so has part: feature:224098-224221:-1:exon
so has part: feature:223101-223286:-1:exon
so has part: feature:222643-222875:-1:exon
so has part: feature:222451-222551:-1:exon
so has part: feature:222161-222322:-1:exon
so has part: feature:221557-221766:-1:exon
so has part: feature:220757-221234:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:224584-224598:-1:exon

position:224584:-1
position: 224584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:224098-224221:-1:exon

position:224098:-1
position: 224098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224221:-1
position: 224221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:223101-223286:-1:exon

position:223101:-1
position: 223101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223286:-1
position: 223286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:222643-222875:-1:exon

position:222643:-1
position: 222643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222875:-1
position: 222875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:222451-222551:-1:exon

position:222451:-1
position: 222451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222551:-1
position: 222551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:222161-222322:-1:exon

position:222161:-1
position: 222161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222322:-1
position: 222322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:221557-221766:-1:exon

position:221557:-1
position: 221557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221766:-1
position: 221766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:220757-221234:-1:exon

position:221234:-1
position: 221234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SIRT3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SIRT3
product: sirtuin 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 20 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030451038.1
SIO_010081: SIRT3
subclass of: SO_0000673
so part of: SIRT3
location: complement(join(220757..221234,221557..221766,222161..222322,222451..222551,222643..222875,223101..223283,224098..224221,224368..224410))
location: region:220757-224410:-1
so has part: feature:224368-224410:-1:exon
so has part: feature:224098-224221:-1:exon
so has part: feature:223101-223283:-1:exon
so has part: feature:222643-222875:-1:exon
so has part: feature:222451-222551:-1:exon
so has part: feature:222161-222322:-1:exon
so has part: feature:221557-221766:-1:exon
so has part: feature:220757-221234:-1:exon

position:224410:-1
position: 224410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224368-224410:-1:exon

position:224368:-1
position: 224368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:224098-224221:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:223101-223283:-1:exon

position:223283:-1
position: 223283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:222643-222875:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:222451-222551:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:222161-222322:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:221557-221766:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:220757-221234:-1:exon

SIRT3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SIRT3
product: sirtuin 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030451039.1
SIO_010081: SIRT3
subclass of: SO_0000673
so part of: SIRT3
location: complement(join(220757..221234,222161..222322,222451..222551,222643..222875,223101..223286,224098..224221,224368..224410))
location: region:220757-224410:-1
so has part: feature:224368-224410:-1:exon
so has part: feature:224098-224221:-1:exon
so has part: feature:223101-223286:-1:exon
so has part: feature:222643-222875:-1:exon
so has part: feature:222451-222551:-1:exon
so has part: feature:222161-222322:-1:exon
so has part: feature:220757-221234:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:224368-224410:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:224098-224221:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:223101-223286:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:222643-222875:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:222451-222551:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:222161-222322:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:220757-221234:-1:exon

SIRT3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SIRT3
product: sirtuin 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 20 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030451037.1
SIO_010081: SIRT3
subclass of: SO_0000673
so part of: SIRT3
location: complement(join(220757..221234,221557..221766,222161..222322,222451..222551,222643..222875,223101..223286,224098..224221,224368..224410))
location: region:220757-224410:-1
so has part: feature:224368-224410:-1:exon
so has part: feature:224098-224221:-1:exon
so has part: feature:223101-223286:-1:exon
so has part: feature:222643-222875:-1:exon
so has part: feature:222451-222551:-1:exon
so has part: feature:222161-222322:-1:exon
so has part: feature:221557-221766:-1:exon
so has part: feature:220757-221234:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:224368-224410:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:224098-224221:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:223101-223286:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:222643-222875:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:222451-222551:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:222161-222322:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:221557-221766:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:220757-221234:-1:exon

SIRT3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SIRT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD-dependent protein deacetylase sirtuin-3, mitochondrial isoform X2
translation: MQRGARRGRGLLAAAWRSLWERSPWDGGSGSSSSGGPGGLAQLSPCSGASGGAAGRIPGTRPFSLATAARALWGGGGGQQQLTLQDVAELLGQERCRRVVVMAGAGISTPSGIPDFRSPGSGLYSNLDQYDIPYPEAIFELEYFFINPKPFFTLAKELYPGSYRPNYAHYFLRLLHDKGLLLRLYTQNIDGLERAAGIPPDRLVEAHGTFATATCTVCRRNFPGEDFRGDVLADRVPRCPVCSGVIKPDIIFFGEELPQRFLLYLTDFPRADLLFIIGTSLEVEPFASLAGAVGRSVPRVLLNRDLVGPFSWQQRHNDVAQLGDVVSGVEKLVELLGWSEEMQVLIQKEKEKLDAKDK
SIO_010081: SIRT3
subclass of: SO_0000673
so part of: SIRT3
location: complement(join(221214..221234,221557..221766,222161..222322,222451..222551,222643..222875,223101..223283,224098..224221,224368..224410))
location: region:221214-224410:-1
so has part: feature:224368-224410:-1:exon
so has part: feature:224098-224221:-1:exon
so has part: feature:223101-223283:-1:exon
so has part: feature:222643-222875:-1:exon
so has part: feature:222451-222551:-1:exon
so has part: feature:222161-222322:-1:exon
so has part: feature:221557-221766:-1:exon
so has part: feature:221214-221234:-1:exon

XP_030306898.1
type: Protein
SIO_000068: ncbiprotein

position:221214:-1
position: 221214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224368-224410:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:224098-224221:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:223101-223283:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:222643-222875:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:222451-222551:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:222161-222322:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:221557-221766:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:221214-221234:-1:exon

SIRT3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SIRT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD-dependent protein deacetylase sirtuin-3, mitochondrial isoform X3
translation: MQRGARRGRGLLAAAWRSLWERSPWDGGSGSSSSGGPGGLAQLSPCSGASGGAAGSRIPGTRPFSLATAARALWGGGGGQQQLTLQDVAELLGQERCRRVVVMAGAGISTPSGIPDFRSPGSGLYSNLDQYDIPYPEAIFELEYFFINPKPFFTLAKELYPGSYRPNYAHYFLRLLHDKGLLLRLYTQNIDGLERAAGIPPDRLVEAHGTFATATCTVCRRNFPGEDFRGDVLADRVPRCPVCSGVIKPDIIFFGEELPQRFLLYLTDFPRADLLFIIGTSLELDAKDK
SIO_010081: SIRT3
subclass of: SO_0000673
so part of: SIRT3
location: complement(join(221214..221234,222161..222322,222451..222551,222643..222875,223101..223286,224098..224221,224368..224410))
location: region:221214-224410:-1
so has part: feature:224368-224410:-1:exon
so has part: feature:224098-224221:-1:exon
so has part: feature:223101-223286:-1:exon
so has part: feature:222643-222875:-1:exon
so has part: feature:222451-222551:-1:exon
so has part: feature:222161-222322:-1:exon
so has part: feature:221214-221234:-1:exon

XP_030306899.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:224368-224410:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:224098-224221:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:223101-223286:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:222643-222875:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:222451-222551:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:222161-222322:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:221214-221234:-1:exon

SIRT3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SIRT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD-dependent protein deacetylase sirtuin-3, mitochondrial isoform X1
translation: MQRGARRGRGLLAAAWRSLWERSPWDGGSGSSSSGGPGGLAQLSPCSGASGGAAGSRIPGTRPFSLATAARALWGGGGGQQQLTLQDVAELLGQERCRRVVVMAGAGISTPSGIPDFRSPGSGLYSNLDQYDIPYPEAIFELEYFFINPKPFFTLAKELYPGSYRPNYAHYFLRLLHDKGLLLRLYTQNIDGLERAAGIPPDRLVEAHGTFATATCTVCRRNFPGEDFRGDVLADRVPRCPVCSGVIKPDIIFFGEELPQRFLLYLTDFPRADLLFIIGTSLEVEPFASLAGAVGRSVPRVLLNRDLVGPFSWQQRHNDVAQLGDVVSGVEKLVELLGWSEEMQVLIQKEKEKLDAKDK
SIO_010081: SIRT3
subclass of: SO_0000673
so part of: SIRT3
location: complement(join(221214..221234,221557..221766,222161..222322,222451..222551,222643..222875,223101..223286,224098..224221,224368..224410))
location: region:221214-224410:-1
so has part: feature:224368-224410:-1:exon
so has part: feature:224098-224221:-1:exon
so has part: feature:223101-223286:-1:exon
so has part: feature:222643-222875:-1:exon
so has part: feature:222451-222551:-1:exon
so has part: feature:222161-222322:-1:exon
so has part: feature:221557-221766:-1:exon
so has part: feature:221214-221234:-1:exon

XP_030306897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:224368-224410:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:224098-224221:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:223101-223286:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:222643-222875:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:222451-222551:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:222161-222322:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:221557-221766:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:221214-221234:-1:exon

SIRT3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SIRT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD-dependent protein deacetylase sirtuin-3, mitochondrial isoform X4
translation: MAGAGISTPSGIPDFRSPGSGLYSNLDQYDIPYPEAIFELEYFFINPKPFFTLAKELYPGSYRPNYAHYFLRLLHDKGLLLRLYTQNIDGLERAAGIPPDRLVEAHGTFATATCTVCRRNFPGEDFRGDVLADRVPRCPVCSGVIKPDIIFFGEELPQRFLLYLTDFPRADLLFIIGTSLEVEPFASLAGAVGRSVPRVLLNRDLVGPFSWQQRHNDVAQLGDVVSGVEKLVELLGWSEEMQVLIQKEKEKLDAKDK
SIO_010081: SIRT3
subclass of: SO_0000673
so part of: SIRT3
location: complement(join(221214..221234,221557..221766,222161..222322,222451..222551,222643..222875,223101..223147))
location: region:221214-223147:-1
so has part: feature:223101-223147:-1:exon
so has part: feature:222643-222875:-1:exon
so has part: feature:222451-222551:-1:exon
so has part: feature:222161-222322:-1:exon
so has part: feature:221557-221766:-1:exon
so has part: feature:221214-221234:-1:exon

XP_030306900.1
type: Protein
SIO_000068: ncbiprotein

position:223147:-1
position: 223147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223101-223147:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:222643-222875:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:222451-222551:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:222161-222322:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:221557-221766:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:221214-221234:-1:exon

PSMD13
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PSMD13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 224642..232345
location: region:224642-232345:1
so has part: feature:224642-232345:1:exon
subclass of: SO_0000010

103539540
type: Gene
SIO_000068: ncbigene

position:224642:1
position: 224642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232345:1
position: 232345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224642-232345:1:exon

PSMD13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PSMD13
product: proteasome 26S subunit, non-ATPase 13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 1 long SRA read, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030451036.1
SIO_010081: PSMD13
subclass of: SO_0000673
so part of: PSMD13
location: join(224642..224848,225264..225342,225786..225820,225900..225955,226310..226353,226573..226659,227004..227175,227600..227679,227761..227886,228530..228592,229456..229536,230685..230801,231551..232345)
location: region:224642-232345:1
so has part: feature:224642-224848:1:exon
so has part: feature:225264-225342:1:exon
so has part: feature:225786-225820:1:exon
so has part: feature:225900-225955:1:exon
so has part: feature:226310-226353:1:exon
so has part: feature:226573-226659:1:exon
so has part: feature:227004-227175:1:exon
so has part: feature:227600-227679:1:exon
so has part: feature:227761-227886:1:exon
so has part: feature:228530-228592:1:exon
so has part: feature:229456-229536:1:exon
so has part: feature:230685-230801:1:exon
so has part: feature:231551-232345:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:224642-224848:1:exon

position:224848:1
position: 224848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:225264-225342:1:exon

position:225264:1
position: 225264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225342:1
position: 225342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:225786-225820:1:exon

position:225786:1
position: 225786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225820:1
position: 225820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:225900-225955:1:exon

position:225900:1
position: 225900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225955:1
position: 225955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:226310-226353:1:exon

position:226310:1
position: 226310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226353:1
position: 226353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:226573-226659:1:exon

position:226573:1
position: 226573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226659:1
position: 226659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:227004-227175:1:exon

position:227004:1
position: 227004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227175:1
position: 227175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:227600-227679:1:exon

position:227600:1
position: 227600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227679:1
position: 227679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:227761-227886:1:exon

position:227761:1
position: 227761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227886:1
position: 227886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:228530-228592:1:exon

position:228530:1
position: 228530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228592:1
position: 228592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:229456-229536:1:exon

position:229456:1
position: 229456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229536:1
position: 229536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:230685-230801:1:exon

position:230685:1
position: 230685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230801:1
position: 230801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:231551-232345:1:exon

position:231551:1
position: 231551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSMD13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PSMD13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 26S proteasome non-ATPase regulatory subunit 13
translation: MKDVPGFLQQSQSSGPGQAAVWHRLEELYNKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGALKLNIGDLQVTKETIEEVEEMLNNLPGVTSVHSRFYDLSSKYYQTTGSHASYYKDALRFLGCIDVKDLPVSEQQERAFTLGLAGLLGEGVYNFGELLMHPVLESLRSTDRQWLIDTLYAFNSGNVETFQALKSAWGQQPDLAANEALLLQKIQLLCLMEMTFTRPANHRQLTFEEIAKSAKVTVNEVELLVMKALSVGLVKGSIDEVDKKVHMTWVQPRVLDLQQIKGMKDRLEFWCTDVRSMEMLVEHQAHDILT
SIO_010081: PSMD13
subclass of: SO_0000673
so part of: PSMD13
location: join(224754..224848,225264..225342,225786..225820,225900..225955,226310..226353,226573..226659,227004..227175,227600..227679,227761..227886,228530..228592,229456..229536,230685..230801,231551..231646)
location: region:224754-231646:1
so has part: feature:224754-224848:1:exon
so has part: feature:225264-225342:1:exon
so has part: feature:225786-225820:1:exon
so has part: feature:225900-225955:1:exon
so has part: feature:226310-226353:1:exon
so has part: feature:226573-226659:1:exon
so has part: feature:227004-227175:1:exon
so has part: feature:227600-227679:1:exon
so has part: feature:227761-227886:1:exon
so has part: feature:228530-228592:1:exon
so has part: feature:229456-229536:1:exon
so has part: feature:230685-230801:1:exon
so has part: feature:231551-231646:1:exon

XP_030306896.1
type: Protein
SIO_000068: ncbiprotein

position:224754:1
position: 224754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231646:1
position: 231646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224754-224848:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:225264-225342:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:225786-225820:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:225900-225955:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:226310-226353:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:226573-226659:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227004-227175:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:227600-227679:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:227761-227886:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:228530-228592:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:229456-229536:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:230685-230801:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:231551-231646:1:exon

LOC115598384
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115598384
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 233572..234109
location: region:233572-234109:1
so has part: feature:233572-234109:1:exon
subclass of: SO_0000011

115598384
type: Gene
SIO_000068: ncbigene

position:233572:1
position: 233572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234109:1
position: 234109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233572-234109:1:exon

LOC115598384
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115598384
product: uncharacterized LOC115598384
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003987614.1
SIO_010081: LOC115598384
subclass of: SO_0000673
so part of: LOC115598384
location: join(233572..233646,233903..234109)
location: region:233572-234109:1
so has part: feature:233572-233646:1:exon
so has part: feature:233903-234109:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:233572-233646:1:exon

position:233646:1
position: 233646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:233903-234109:1:exon

position:233903:1
position: 233903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PGGHG
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PGGHG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 237355..245957
location: region:237355-245957:1
so has part: feature:237355-245957:1:exon
subclass of: SO_0000010

103539542
type: Gene
SIO_000068: ncbigene

position:237355:1
position: 237355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245957:1
position: 245957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237355-245957:1:exon

PGGHG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PGGHG
product: protein-glucosylgalactosylhydroxylysine glucosidase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030451458.1
SIO_010081: PGGHG
subclass of: SO_0000673
so part of: PGGHG
location: join(237355..237431,238416..238674,239172..239382,239881..240316,240809..240928,241145..241276,241600..241711,241851..241923,242367..242503,243207..243340,243435..243530,243850..243947,245484..245698,245788..245957)
location: region:237355-245957:1
so has part: feature:237355-237431:1:exon
so has part: feature:238416-238674:1:exon
so has part: feature:239172-239382:1:exon
so has part: feature:239881-240316:1:exon
so has part: feature:240809-240928:1:exon
so has part: feature:241145-241276:1:exon
so has part: feature:241600-241711:1:exon
so has part: feature:241851-241923:1:exon
so has part: feature:242367-242503:1:exon
so has part: feature:243207-243340:1:exon
so has part: feature:243435-243530:1:exon
so has part: feature:243850-243947:1:exon
so has part: feature:245484-245698:1:exon
so has part: feature:245788-245957:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:237355-237431:1:exon

position:237431:1
position: 237431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:238416-238674:1:exon

position:238416:1
position: 238416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238674:1
position: 238674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:239172-239382:1:exon

position:239172:1
position: 239172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239382:1
position: 239382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:239881-240316:1:exon

position:239881:1
position: 239881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240316:1
position: 240316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:240809-240928:1:exon

position:240809:1
position: 240809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240928:1
position: 240928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:241145-241276:1:exon

position:241145:1
position: 241145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241276:1
position: 241276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:241600-241711:1:exon

position:241600:1
position: 241600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241711:1
position: 241711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:241851-241923:1:exon

position:241851:1
position: 241851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241923:1
position: 241923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:242367-242503:1:exon

position:242367:1
position: 242367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242503:1
position: 242503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:243207-243340:1:exon

position:243207:1
position: 243207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243340:1
position: 243340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:243435-243530:1:exon

position:243435:1
position: 243435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243530:1
position: 243530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:243850-243947:1:exon

position:243850:1
position: 243850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243947:1
position: 243947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:245484-245698:1:exon

position:245484:1
position: 245484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245698:1
position: 245698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:245788-245957:1:exon

position:245788:1
position: 245788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PGGHG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PGGHG
product: protein-glucosylgalactosylhydroxylysine glucosidase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_008506052.2
SIO_010081: PGGHG
subclass of: SO_0000673
so part of: PGGHG
location: join(237964..238008,238416..238674,239172..239382,239881..240316,240809..240928,241145..241276,241600..241711,241851..241923,242367..242503,243207..243340,243435..243530,243850..243947,245484..245698,245788..245957)
location: region:237964-245957:1
so has part: feature:237964-238008:1:exon
so has part: feature:238416-238674:1:exon
so has part: feature:239172-239382:1:exon
so has part: feature:239881-240316:1:exon
so has part: feature:240809-240928:1:exon
so has part: feature:241145-241276:1:exon
so has part: feature:241600-241711:1:exon
so has part: feature:241851-241923:1:exon
so has part: feature:242367-242503:1:exon
so has part: feature:243207-243340:1:exon
so has part: feature:243435-243530:1:exon
so has part: feature:243850-243947:1:exon
so has part: feature:245484-245698:1:exon
so has part: feature:245788-245957:1:exon

position:237964:1
position: 237964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237964-238008:1:exon

position:238008:1
position: 238008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:238416-238674:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:239172-239382:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:239881-240316:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:240809-240928:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:241145-241276:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:241600-241711:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:241851-241923:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:242367-242503:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:243207-243340:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:243435-243530:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:243850-243947:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:245484-245698:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:245788-245957:1:exon

PGGHG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PGGHG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-glucosylgalactosylhydroxylysine glucosidase
translation: MADGSGDPAVFTCSSLPSDPRLLPTLTNAYLGTRLYRDILHVNGVYNGAAGDTHRADIPSPVNVRMMLPGVDGLAQTFTLNTQTGTFSHVLQSTDCAAIHQIYAHHSLVHLMAFSITIQRSALTTQPITVQLQTPFVPRSQDLDLHRGPDFQGAHYVYGQTLVPEVEGGPRPTIHMLWGPVPPSLTLGGEERERSWEFLTAVAESEEEAKRSYSQGMAMVATGSLHASHLHAWARLWQGCCVDLDGPLPLRQALYGCLFYLLSSIPPQENPGFLFHGISPGGLSNGTQGEDYWGHIFWDQDTWMFPNILLFYPEAARAILGYRLRGLEGALHNARDQGYQGAKFPWESAATGREVCPEEIYGEQEIHVTGDVLMAFEQYYCTTQDQKLFREDGGWKLVGAVAQYWCSRMVWSQEEQCYHIKGVMPPDEYHCQVDNSVYTNAVARRSLNFAADVARDFSVPVPEEWVDCAKKVKVPFDGEKKYHPEYDGYSPGEPVKQADVVLLGFPLMHPMSPEVRRNDLEMYEPVTERDGPAMTWSMFAVGWLELKEVQRAQSQLNKCFSNITEPFKIWVENSDGSGAVNFLTGMGGFLQAVLFGYTGFRITRSSLRFDPTFPDDIHRMEVTGVSYLGNKLKFTITRGEMGVQVTESPQDPPASSLEAVLEESGQRFPLRAGQSVSFSTAAGWIQRSPTTALQTGAQEQEHTERGMLVEGQQ
SIO_010081: PGGHG
subclass of: SO_0000673
so part of: PGGHG
location: join(238422..238674,239172..239382,239881..240316,240809..240928,241145..241276,241600..241711,241851..241923,242367..242503,243207..243340,243435..243530,243850..243947,245484..245698,245788..245912)
location: region:238422-245912:1
so has part: feature:238422-238674:1:exon
so has part: feature:239172-239382:1:exon
so has part: feature:239881-240316:1:exon
so has part: feature:240809-240928:1:exon
so has part: feature:241145-241276:1:exon
so has part: feature:241600-241711:1:exon
so has part: feature:241851-241923:1:exon
so has part: feature:242367-242503:1:exon
so has part: feature:243207-243340:1:exon
so has part: feature:243435-243530:1:exon
so has part: feature:243850-243947:1:exon
so has part: feature:245484-245698:1:exon
so has part: feature:245788-245912:1:exon

XP_008504274.2
type: Protein
SIO_000068: ncbiprotein

position:238422:1
position: 238422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245912:1
position: 245912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238422-238674:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:239172-239382:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:239881-240316:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240809-240928:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:241145-241276:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:241600-241711:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:241851-241923:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:242367-242503:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:243207-243340:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:243435-243530:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:243850-243947:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:245484-245698:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:245788-245912:1:exon

PGGHG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PGGHG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-glucosylgalactosylhydroxylysine glucosidase
translation: MADGSGDPAVFTCSSLPSDPRLLPTLTNAYLGTRLYRDILHVNGVYNGAAGDTHRADIPSPVNVRMMLPGVDGLAQTFTLNTQTGTFSHVLQSTDCAAIHQIYAHHSLVHLMAFSITIQRSALTTQPITVQLQTPFVPRSQDLDLHRGPDFQGAHYVYGQTLVPEVEGGPRPTIHMLWGPVPPSLTLGGEERERSWEFLTAVAESEEEAKRSYSQGMAMVATGSLHASHLHAWARLWQGCCVDLDGPLPLRQALYGCLFYLLSSIPPQENPGFLFHGISPGGLSNGTQGEDYWGHIFWDQDTWMFPNILLFYPEAARAILGYRLRGLEGALHNARDQGYQGAKFPWESAATGREVCPEEIYGEQEIHVTGDVLMAFEQYYCTTQDQKLFREDGGWKLVGAVAQYWCSRMVWSQEEQCYHIKGVMPPDEYHCQVDNSVYTNAVARRSLNFAADVARDFSVPVPEEWVDCAKKVKVPFDGEKKYHPEYDGYSPGEPVKQADVVLLGFPLMHPMSPEVRRNDLEMYEPVTERDGPAMTWSMFAVGWLELKEVQRAQSQLNKCFSNITEPFKIWVENSDGSGAVNFLTGMGGFLQAVLFGYTGFRITRSSLRFDPTFPDDIHRMEVTGVSYLGNKLKFTITRGEMGVQVTESPQDPPASSLEAVLEESGQRFPLRAGQSVSFSTAAGWIQRSPTTALQTGAQEQEHTERGMLVEGQQ
SIO_010081: PGGHG
subclass of: SO_0000673
so part of: PGGHG
location: join(238422..238674,239172..239382,239881..240316,240809..240928,241145..241276,241600..241711,241851..241923,242367..242503,243207..243340,243435..243530,243850..243947,245484..245698,245788..245912)
location: region:238422-245912:1
so has part: feature:238422-238674:1:exon
so has part: feature:239172-239382:1:exon
so has part: feature:239881-240316:1:exon
so has part: feature:240809-240928:1:exon
so has part: feature:241145-241276:1:exon
so has part: feature:241600-241711:1:exon
so has part: feature:241851-241923:1:exon
so has part: feature:242367-242503:1:exon
so has part: feature:243207-243340:1:exon
so has part: feature:243435-243530:1:exon
so has part: feature:243850-243947:1:exon
so has part: feature:245484-245698:1:exon
so has part: feature:245788-245912:1:exon

XP_030307318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:238422-238674:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:239172-239382:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:239881-240316:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240809-240928:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:241145-241276:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:241600-241711:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:241851-241923:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:242367-242503:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:243207-243340:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:243435-243530:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:243850-243947:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:245484-245698:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:245788-245912:1:exon

IFITM5
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: IFITM5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(247329..249015)
location: region:247329-249015:-1
so has part: feature:247329-249015:-1:exon
subclass of: SO_0000010

103539543
type: Gene
SIO_000068: ncbigene

position:247329:-1
position: 247329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249015:-1
position: 249015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247329-249015:-1:exon

IFITM5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: IFITM5
product: interferon induced transmembrane protein 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030451308.1
SIO_010081: IFITM5
subclass of: SO_0000673
so part of: IFITM5
location: complement(join(247329..247870,248276..248499,248823..249015))
location: region:247329-249015:-1
so has part: feature:248823-249015:-1:exon
so has part: feature:248276-248499:-1:exon
so has part: feature:247329-247870:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:248823-249015:-1:exon

position:248823:-1
position: 248823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:248276-248499:-1:exon

position:248276:-1
position: 248276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248499:-1
position: 248499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:247329-247870:-1:exon

position:247870:-1
position: 247870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IFITM5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: IFITM5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-induced transmembrane protein 5
translation: MKPQQTEVSAPLQPSDQEPTGPEEQPPDYVLWSLFNVPLNATIYPPVPQRGICPATATREDWAEDRLVEQESRGVPLCVAMDTSYPREDHSLAPSHKRELPPTLLTSPPPRDHLVWSIFNTLYMNFCCLGFVALAFSVKARDRKVCGDVEAAQRFSSKARCYNALATAGSLVLPLLLAALLITGVIHLSKLAQDSVGFFTYQFSPSDQEDK
SIO_010081: IFITM5
subclass of: SO_0000673
so part of: IFITM5
location: complement(join(247652..247870,248276..248499,248823..249015))
location: region:247652-249015:-1
so has part: feature:248823-249015:-1:exon
so has part: feature:248276-248499:-1:exon
so has part: feature:247652-247870:-1:exon

XP_030307168.1
type: Protein
SIO_000068: ncbiprotein

position:247652:-1
position: 247652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248823-249015:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248276-248499:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:247652-247870:-1:exon

LOC103539545
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103539545
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(249932..252430)
location: region:249932-252430:-1
so has part: feature:249932-252430:-1:exon
subclass of: SO_0000010

103539545
type: Gene
SIO_000068: ncbigene

position:249932:-1
position: 249932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252430:-1
position: 252430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249932-252430:-1:exon

LOC103539545
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103539545
product: interferon-induced transmembrane protein 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030451240.1
SIO_010081: LOC103539545
subclass of: SO_0000673
so part of: LOC103539545
location: complement(join(249932..250253,251102..251206,251836..251910,252078..252430))
location: region:249932-252430:-1
so has part: feature:252078-252430:-1:exon
so has part: feature:251836-251910:-1:exon
so has part: feature:251102-251206:-1:exon
so has part: feature:249932-250253:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:252078-252430:-1:exon

position:252078:-1
position: 252078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:251836-251910:-1:exon

position:251836:-1
position: 251836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251910:-1
position: 251910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:251102-251206:-1:exon

position:251102:-1
position: 251102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251206:-1
position: 251206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:249932-250253:-1:exon

position:250253:-1
position: 250253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103539545
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103539545
product: interferon-induced transmembrane protein 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_008506054.2
SIO_010081: LOC103539545
subclass of: SO_0000673
so part of: LOC103539545
location: complement(join(249932..250253,251102..251445))
location: region:249932-251445:-1
so has part: feature:251102-251445:-1:exon
so has part: feature:249932-250253:-1:exon

position:251445:-1
position: 251445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251102-251445:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:249932-250253:-1:exon

LOC103539545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103539545
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-induced transmembrane protein 3-like isoform X2
translation: MILISQARPPHSCQPTPWLLKPKGGQIFPQRQWEPVPNAQDFVLWSFFNAMFCNPCCLGFVALVYSIKARDKKIAQDPAGAVGFGRTAKQLNIAALCLGLIFFITIIVLAVLFRSQNPHGV
SIO_010081: LOC103539545
subclass of: SO_0000673
so part of: LOC103539545
location: complement(join(250092..250253,251102..251206,251836..251910,252078..252101))
location: region:250092-252101:-1
so has part: feature:252078-252101:-1:exon
so has part: feature:251836-251910:-1:exon
so has part: feature:251102-251206:-1:exon
so has part: feature:250092-250253:-1:exon

XP_030307100.1
type: Protein
SIO_000068: ncbiprotein

position:250092:-1
position: 250092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252101:-1
position: 252101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252078-252101:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:251836-251910:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:251102-251206:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:250092-250253:-1:exon

LOC103539545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103539545
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-induced transmembrane protein 1-like isoform X1
translation: MENQSVSINMQQPYGRNGAGSPAIAFGPTATTFVRQEPVPNAQDFVLWSFFNAMFCNPCCLGFVALVYSIKARDKKIAQDPAGAVGFGRTAKQLNIAALCLGLIFFITIIVLAVLFRSQNPHGV
SIO_010081: LOC103539545
subclass of: SO_0000673
so part of: LOC103539545
location: complement(join(250092..250253,251102..251314))
location: region:250092-251314:-1
so has part: feature:251102-251314:-1:exon
so has part: feature:250092-250253:-1:exon

XP_008504276.2
type: Protein
SIO_000068: ncbiprotein

position:251314:-1
position: 251314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251102-251314:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:250092-250253:-1:exon

LOC103539513
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103539513
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(254073..255330)
location: region:254073-255330:-1
so has part: feature:254073-255330:-1:exon
subclass of: SO_0000010

103539513
type: Gene
SIO_000068: ncbigene

position:254073:-1
position: 254073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255330:-1
position: 255330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254073-255330:-1:exon

LOC103539513
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103539513
product: dispanin subfamily A member 2b-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_008506023.2
SIO_010081: LOC103539513
subclass of: SO_0000673
so part of: LOC103539513
location: complement(join(254073..254515,255036..255330))
location: region:254073-255330:-1
so has part: feature:255036-255330:-1:exon
so has part: feature:254073-254515:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:255036-255330:-1:exon

position:255036:-1
position: 255036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:254073-254515:-1:exon

position:254515:-1
position: 254515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103539513
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103539513
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dispanin subfamily A member 2b-like
translation: MERWSSPGPAISPYKPLSEGLDMEDLPPRTVVTVEQPPLSPPPRDHLAWSLCTALYSNICCLGFLALVFSIKSRDRKVLGDFKGALSYGSTSKYLNITALVLNILFIIVVIIVLVTTGIMARVYYQQEQENQPYLGPS
SIO_010081: LOC103539513
subclass of: SO_0000673
so part of: LOC103539513
location: complement(join(254315..254515,255036..255251))
location: region:254315-255251:-1
so has part: feature:255036-255251:-1:exon
so has part: feature:254315-254515:-1:exon

XP_008504245.2
type: Protein
SIO_000068: ncbiprotein

position:254315:-1
position: 254315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255251:-1
position: 255251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255036-255251:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:254315-254515:-1:exon

B4GALNT4
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: B4GALNT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 257767..276506
location: region:257767-276506:1
so has part: feature:257767-276506:1:exon
subclass of: SO_0000010

103539546
type: Gene
SIO_000068: ncbigene

position:257767:1
position: 257767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276506:1
position: 276506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257767-276506:1:exon

B4GALNT4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: B4GALNT4
product: beta-1,4-N-acetyl-galactosaminyltransferase 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030451183.1
SIO_010081: B4GALNT4
subclass of: SO_0000673
so part of: B4GALNT4
location: join(257767..257930,264540..264655,265653..265763,266376..266471,266771..266861,267185..267285,267749..267816,268218..268296,269525..269591,270855..270998,271211..271320,271610..271710,272079..272161,272666..273926,274074..274381,274634..274787,275115..275187,275563..275716,275958..276084,276330..276506)
location: region:257767-276506:1
so has part: feature:257767-257930:1:exon
so has part: feature:264540-264655:1:exon
so has part: feature:265653-265763:1:exon
so has part: feature:266376-266471:1:exon
so has part: feature:266771-266861:1:exon
so has part: feature:267185-267285:1:exon
so has part: feature:267749-267816:1:exon
so has part: feature:268218-268296:1:exon
so has part: feature:269525-269591:1:exon
so has part: feature:270855-270998:1:exon
so has part: feature:271211-271320:1:exon
so has part: feature:271610-271710:1:exon
so has part: feature:272079-272161:1:exon
so has part: feature:272666-273926:1:exon
so has part: feature:274074-274381:1:exon
so has part: feature:274634-274787:1:exon
so has part: feature:275115-275187:1:exon
so has part: feature:275563-275716:1:exon
so has part: feature:275958-276084:1:exon
so has part: feature:276330-276506:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:257767-257930:1:exon

position:257930:1
position: 257930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:264540-264655:1:exon

position:264540:1
position: 264540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264655:1
position: 264655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:265653-265763:1:exon

position:265653:1
position: 265653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265763:1
position: 265763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:266376-266471:1:exon

position:266376:1
position: 266376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266471:1
position: 266471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:266771-266861:1:exon

position:266771:1
position: 266771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266861:1
position: 266861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:267185-267285:1:exon

position:267185:1
position: 267185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267285:1
position: 267285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:267749-267816:1:exon

position:267749:1
position: 267749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267816:1
position: 267816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:268218-268296:1:exon

position:268218:1
position: 268218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268296:1
position: 268296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:269525-269591:1:exon

position:269525:1
position: 269525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269591:1
position: 269591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:270855-270998:1:exon

position:270855:1
position: 270855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270998:1
position: 270998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:271211-271320:1:exon

position:271211:1
position: 271211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271320:1
position: 271320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:271610-271710:1:exon

position:271610:1
position: 271610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271710:1
position: 271710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:272079-272161:1:exon

position:272079:1
position: 272079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272161:1
position: 272161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:272666-273926:1:exon

position:272666:1
position: 272666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273926:1
position: 273926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:274074-274381:1:exon

position:274074:1
position: 274074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274381:1
position: 274381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:274634-274787:1:exon

position:274634:1
position: 274634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274787:1
position: 274787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:275115-275187:1:exon

position:275115:1
position: 275115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275187:1
position: 275187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:275563-275716:1:exon

position:275563:1
position: 275563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275716:1
position: 275716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:275958-276084:1:exon

position:275958:1
position: 275958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276084:1
position: 276084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:276330-276506:1:exon

position:276330:1
position: 276330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

B4GALNT4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: B4GALNT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase 1 isoform X1
translation: MPRLPVKKLRKQLKLLLLLVLLTFAVWFTYLHISLVRQGRALRLPFAYSRDGERMGEVTDPGRRAVAARASSRQSNTDDSSESQEEELMSDGQDLDRWFSRGQWPNQGTNHPKLNLTRQALPWNEQYKGKANLHVFEDWCGGAVRHLRKNLHFPLFPHTRTTVKKLAVSPKWKNYGLRIFGYIHPFKDGDFQFSVASDDNSEFWLSSDDSPFNSRLAASVGKLGTEWTAPGEFTKFSSQVSKPLRLMSSRRYYFELLHKQDDRGSDHVEVGWRVFLPSLKFEVIDSSYISLYTDESSLKMNHVEHIPQTLASHSGSHLWEAQRDEHGADMLKADPRDTFFLTPAIEASRVEDVLVPCAYSPTYVVKDFPIARYQGLQFVYLSFVYPNDFTRLTHMETENKCFYRESPLYLEKFGFYKYMKMDEEEEDPRQRAFLFLSQDNFLEDEEEGEEEEGVDSPEPTDPPPKAKEKSSGPVPGAKGKETRLVTGAYGDDLDYYSFGHRLGQAQAKASTPGQLGRWSTSLQASTSPAAVPRDLRGEEDTGPELERVGGRMLRWLPRDPGEAEEDELGLLASTKRAGALNLQPHLSVPIFGGKAKILGPSKPVAPREDKKPQKTQEKVYVTRLQPGKRKAPAQEPAFPGIFLYPKPLKKVHLHSMSPQKHPISSSKLRAVPGRRTPWLLRNISKDRDPARRKSPRVGGRRWEGPSKLGTEGQVLPGILTLGTEGLFSKETPEDTTPAPGRIAATSEYNSSEVRRVTSLLKVSETTASQQEEGKGQEEEEEEEEEVSDYSYEAEELQQSWLEDSINWQRTFSVSSVDFELLRSDWNDLRCNVSGNLQLGESEVVEVVAQYMEKLNEKNGGIYTLLRIINVEKRRDTARGNRYLLELELSERGQRTVRLSEYVYVLLHQGKQDSSAEANPEGPALGATEPQPSTWSLLYGKPVLCRPLRLSWRQDVMVHFVVPVKNQARWVQQFISDMAHLYEATKDANFNVILVDFDSDDMDVERALQDARLPRYQYLRRTGNFERSSGLQAGVDVVEDGHSIVFLCDLHIHFPPNILDSIRKHCVEGKLAYAPIVMRLSCGSSPREPNGYWEVNGFGLFGIYKSDFDRVGGMNTEEFRDRWGGEDWELLDRVLQSGLEVERLRLRNFYHYYHSKRGMWNARSKKPPKD
SIO_010081: B4GALNT4
subclass of: SO_0000673
so part of: B4GALNT4
location: join(257780..257930,264540..264655,265653..265763,266376..266471,266771..266861,267185..267285,267749..267816,268218..268296,269525..269591,270855..270998,271211..271320,271610..271710,272079..272161,272666..273926,274074..274381,274634..274787,275115..275187,275563..275716,275958..276084,276330..276444)
location: region:257780-276444:1
so has part: feature:257780-257930:1:exon
so has part: feature:264540-264655:1:exon
so has part: feature:265653-265763:1:exon
so has part: feature:266376-266471:1:exon
so has part: feature:266771-266861:1:exon
so has part: feature:267185-267285:1:exon
so has part: feature:267749-267816:1:exon
so has part: feature:268218-268296:1:exon
so has part: feature:269525-269591:1:exon
so has part: feature:270855-270998:1:exon
so has part: feature:271211-271320:1:exon
so has part: feature:271610-271710:1:exon
so has part: feature:272079-272161:1:exon
so has part: feature:272666-273926:1:exon
so has part: feature:274074-274381:1:exon
so has part: feature:274634-274787:1:exon
so has part: feature:275115-275187:1:exon
so has part: feature:275563-275716:1:exon
so has part: feature:275958-276084:1:exon
so has part: feature:276330-276444:1:exon

XP_030307043.1
type: Protein
SIO_000068: ncbiprotein

position:257780:1
position: 257780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276444:1
position: 276444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257780-257930:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:264540-264655:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:265653-265763:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:266376-266471:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:266771-266861:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:267185-267285:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:267749-267816:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:268218-268296:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:269525-269591:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:270855-270998:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:271211-271320:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:271610-271710:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:272079-272161:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:272666-273926:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:274074-274381:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:274634-274787:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:275115-275187:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:275563-275716:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:275958-276084:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:276330-276444:1:exon

B4GALNT4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: B4GALNT4
product: beta-1,4-N-acetyl-galactosaminyltransferase 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030451184.1
SIO_010081: B4GALNT4
subclass of: SO_0000673
so part of: B4GALNT4
location: join(266799..266861,267749..267816,268218..268296,269525..269591,270855..270998,271211..271320,271610..271710,272079..272161,272666..273926,274074..274381,274634..274787,275115..275187,275563..275716,275958..276084,276330..276506)
location: region:266799-276506:1
so has part: feature:266799-266861:1:exon
so has part: feature:267749-267816:1:exon
so has part: feature:268218-268296:1:exon
so has part: feature:269525-269591:1:exon
so has part: feature:270855-270998:1:exon
so has part: feature:271211-271320:1:exon
so has part: feature:271610-271710:1:exon
so has part: feature:272079-272161:1:exon
so has part: feature:272666-273926:1:exon
so has part: feature:274074-274381:1:exon
so has part: feature:274634-274787:1:exon
so has part: feature:275115-275187:1:exon
so has part: feature:275563-275716:1:exon
so has part: feature:275958-276084:1:exon
so has part: feature:276330-276506:1:exon

position:266799:1
position: 266799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266799-266861:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:267749-267816:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:268218-268296:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269525-269591:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:270855-270998:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:271211-271320:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:271610-271710:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:272079-272161:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:272666-273926:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:274074-274381:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:274634-274787:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:275115-275187:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:275563-275716:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:275958-276084:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:276330-276506:1:exon

B4GALNT4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: B4GALNT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase 1 isoform X2
translation: MLGTEWTAPGEFTKFSSQVSKPLRLMSSRRYYFELLHKQDDRGSDHVEVGWRVFLPSLKFEVIDSSYISLYTDESSLKMNHVEHIPQTLASHSGSHLWEAQRDEHGADMLKADPRDTFFLTPAIEASRVEDVLVPCAYSPTYVVKDFPIARYQGLQFVYLSFVYPNDFTRLTHMETENKCFYRESPLYLEKFGFYKYMKMDEEEEDPRQRAFLFLSQDNFLEDEEEGEEEEGVDSPEPTDPPPKAKEKSSGPVPGAKGKETRLVTGAYGDDLDYYSFGHRLGQAQAKASTPGQLGRWSTSLQASTSPAAVPRDLRGEEDTGPELERVGGRMLRWLPRDPGEAEEDELGLLASTKRAGALNLQPHLSVPIFGGKAKILGPSKPVAPREDKKPQKTQEKVYVTRLQPGKRKAPAQEPAFPGIFLYPKPLKKVHLHSMSPQKHPISSSKLRAVPGRRTPWLLRNISKDRDPARRKSPRVGGRRWEGPSKLGTEGQVLPGILTLGTEGLFSKETPEDTTPAPGRIAATSEYNSSEVRRVTSLLKVSETTASQQEEGKGQEEEEEEEEEVSDYSYEAEELQQSWLEDSINWQRTFSVSSVDFELLRSDWNDLRCNVSGNLQLGESEVVEVVAQYMEKLNEKNGGIYTLLRIINVEKRRDTARGNRYLLELELSERGQRTVRLSEYVYVLLHQGKQDSSAEANPEGPALGATEPQPSTWSLLYGKPVLCRPLRLSWRQDVMVHFVVPVKNQARWVQQFISDMAHLYEATKDANFNVILVDFDSDDMDVERALQDARLPRYQYLRRTGNFERSSGLQAGVDVVEDGHSIVFLCDLHIHFPPNILDSIRKHCVEGKLAYAPIVMRLSCGSSPREPNGYWEVNGFGLFGIYKSDFDRVGGMNTEEFRDRWGGEDWELLDRVLQSGLEVERLRLRNFYHYYHSKRGMWNARSKKPPKD
SIO_010081: B4GALNT4
subclass of: SO_0000673
so part of: B4GALNT4
location: join(266859..266861,267749..267816,268218..268296,269525..269591,270855..270998,271211..271320,271610..271710,272079..272161,272666..273926,274074..274381,274634..274787,275115..275187,275563..275716,275958..276084,276330..276444)
location: region:266859-276444:1
so has part: feature:266859-266861:1:exon
so has part: feature:267749-267816:1:exon
so has part: feature:268218-268296:1:exon
so has part: feature:269525-269591:1:exon
so has part: feature:270855-270998:1:exon
so has part: feature:271211-271320:1:exon
so has part: feature:271610-271710:1:exon
so has part: feature:272079-272161:1:exon
so has part: feature:272666-273926:1:exon
so has part: feature:274074-274381:1:exon
so has part: feature:274634-274787:1:exon
so has part: feature:275115-275187:1:exon
so has part: feature:275563-275716:1:exon
so has part: feature:275958-276084:1:exon
so has part: feature:276330-276444:1:exon

XP_030307044.1
type: Protein
SIO_000068: ncbiprotein

position:266859:1
position: 266859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266859-266861:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:267749-267816:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:268218-268296:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269525-269591:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:270855-270998:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:271211-271320:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:271610-271710:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:272079-272161:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:272666-273926:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:274074-274381:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:274634-274787:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:275115-275187:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:275563-275716:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:275958-276084:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:276330-276444:1:exon

PKP3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PKP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 282025..288830
location: region:282025-288830:1
so has part: feature:282025-288830:1:exon
subclass of: SO_0000010

103539547
type: Gene
SIO_000068: ncbigene

position:282025:1
position: 282025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288830:1
position: 288830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282025-288830:1:exon

PKP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PKP3
product: plakophilin 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030451241.1
SIO_010081: PKP3
subclass of: SO_0000673
so part of: PKP3
location: join(282025..282352,283280..283356,283504..284225,284572..284695,284838..285042,285270..285444,285674..285791,286069..286236,286580..286765,287006..287159,287595..287787,288150..288237,288571..288830)
location: region:282025-288830:1
so has part: feature:282025-282352:1:exon
so has part: feature:283280-283356:1:exon
so has part: feature:283504-284225:1:exon
so has part: feature:284572-284695:1:exon
so has part: feature:284838-285042:1:exon
so has part: feature:285270-285444:1:exon
so has part: feature:285674-285791:1:exon
so has part: feature:286069-286236:1:exon
so has part: feature:286580-286765:1:exon
so has part: feature:287006-287159:1:exon
so has part: feature:287595-287787:1:exon
so has part: feature:288150-288237:1:exon
so has part: feature:288571-288830:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:282025-282352:1:exon

position:282352:1
position: 282352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:283280-283356:1:exon

position:283280:1
position: 283280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283356:1
position: 283356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:283504-284225:1:exon

position:283504:1
position: 283504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284225:1
position: 284225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:284572-284695:1:exon

position:284572:1
position: 284572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284695:1
position: 284695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:284838-285042:1:exon

position:284838:1
position: 284838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285042:1
position: 285042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:285270-285444:1:exon

position:285270:1
position: 285270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285444:1
position: 285444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:285674-285791:1:exon

position:285674:1
position: 285674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285791:1
position: 285791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:286069-286236:1:exon

position:286069:1
position: 286069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286236:1
position: 286236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:286580-286765:1:exon

position:286580:1
position: 286580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286765:1
position: 286765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:287006-287159:1:exon

position:287006:1
position: 287006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287159:1
position: 287159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:287595-287787:1:exon

position:287595:1
position: 287595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287787:1
position: 287787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:288150-288237:1:exon

position:288150:1
position: 288150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288237:1
position: 288237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:288571-288830:1:exon

position:288571:1
position: 288571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PKP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PKP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plakophilin-3
translation: MATAVQDTNTFLLSALQPEAGVCSLALPSDRQLDGRGREAAEAQRLRSARVQEQVRIRMMLRGQAPTRHDVPDHADGSRGGQYSTTLRSSFSSRSQSNGLDPKASLYQPLAKKDFGTLKGSSWSSRSAVDLTPHKRMATISNGGLAKGRGYGYAMSQAANTSPRPSSFHERNYRSRQNLDTLSLRSLRLTDGPLSPAATADDRYSVLSEQLDPLGHRPLYKSQGNGGFARSYTFERQLSAGSATKAASDWLEGSEVTQSRTIRAPAMRTLQRFQSNNRSRLSTGSFGSVQAASQAGVGSSYMGMVEHSSRAPSVRSLAESGHHLQDQRAMEMYNGHSTLLGHHAGGFDDIDLPSAVKYLIASDPNLQVLGAAYLQHKCYSDSNAKKQARSLQAMPKLVKLFNSPNQEVQRHATGAMRNLIYDNAENKLALVEENGIYELMRTLREPDDELRKNVTGILWNLSSSDNLKDRLARDTLEQLTDLVLVPLSGLGGSGVIQQNPSEAEIFYNSTGFLRNLSSASQQTRQKMRECHGLVDSMIHYVNSSLEVGKSEDKSVENAVCVLRNLSYRLYDEMPPSSLQRLEGHRRNTSGMVTGELVGCFSPQSKKAREHYLNADIVTFTEVSKDPKGMEWLWNPQIVGIYNRLLQRCELNKHTTEAASGALQNITAGDRRWAGVLSRLALEQERILNPVLDRVRTADHHQLRSLTGLIRNLSRHARNKDEMSTKVVSHLIEKLPGSIGDKAPPADVIVNIIAVLNNLVVESPMAARDIVYFDGLRKLFYIKKRRDSSDHEKSSRAAASLLGNMWQYTKLHRDFKMKGYRKEDFLGL
SIO_010081: PKP3
subclass of: SO_0000673
so part of: PKP3
location: join(282115..282352,283280..283356,283504..284225,284572..284695,284838..285042,285270..285444,285674..285791,286069..286236,286580..286765,287006..287159,287595..287787,288150..288237,288571..288606)
location: region:282115-288606:1
so has part: feature:282115-282352:1:exon
so has part: feature:283280-283356:1:exon
so has part: feature:283504-284225:1:exon
so has part: feature:284572-284695:1:exon
so has part: feature:284838-285042:1:exon
so has part: feature:285270-285444:1:exon
so has part: feature:285674-285791:1:exon
so has part: feature:286069-286236:1:exon
so has part: feature:286580-286765:1:exon
so has part: feature:287006-287159:1:exon
so has part: feature:287595-287787:1:exon
so has part: feature:288150-288237:1:exon
so has part: feature:288571-288606:1:exon

XP_030307101.1
type: Protein
SIO_000068: ncbiprotein

position:282115:1
position: 282115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288606:1
position: 288606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282115-282352:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:283280-283356:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283504-284225:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284572-284695:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:284838-285042:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285270-285444:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285674-285791:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:286069-286236:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:286580-286765:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:287006-287159:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:287595-287787:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:288150-288237:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:288571-288606:1:exon

SIGIRR
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SIGIRR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(289762..294983)
location: region:289762-294983:-1
so has part: feature:289762-294983:-1:exon
subclass of: SO_0000010

103539548
type: Gene
SIO_000068: ncbigene

position:289762:-1
position: 289762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294983:-1
position: 294983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289762-294983:-1:exon

SIGIRR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SIGIRR
product: single Ig and TIR domain containing
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_008506058.2
SIO_010081: SIGIRR
subclass of: SO_0000673
so part of: SIGIRR
location: complement(join(289762..290362,290497..290677,291206..291356,291432..291534,291611..291754,291868..292008,292175..292305,292388..292574,292875..292995,294901..294983))
location: region:289762-294983:-1
so has part: feature:294901-294983:-1:exon
so has part: feature:292875-292995:-1:exon
so has part: feature:292388-292574:-1:exon
so has part: feature:292175-292305:-1:exon
so has part: feature:291868-292008:-1:exon
so has part: feature:291611-291754:-1:exon
so has part: feature:291432-291534:-1:exon
so has part: feature:291206-291356:-1:exon
so has part: feature:290497-290677:-1:exon
so has part: feature:289762-290362:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:294901-294983:-1:exon

position:294901:-1
position: 294901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:292875-292995:-1:exon

position:292875:-1
position: 292875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292995:-1
position: 292995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:292388-292574:-1:exon

position:292388:-1
position: 292388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292574:-1
position: 292574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:292175-292305:-1:exon

position:292175:-1
position: 292175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292305:-1
position: 292305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:291868-292008:-1:exon

position:291868:-1
position: 291868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292008:-1
position: 292008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:291611-291754:-1:exon

position:291611:-1
position: 291611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291754:-1
position: 291754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:291432-291534:-1:exon

position:291432:-1
position: 291432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291534:-1
position: 291534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:291206-291356:-1:exon

position:291206:-1
position: 291206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291356:-1
position: 291356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:290497-290677:-1:exon

position:290497:-1
position: 290497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290677:-1
position: 290677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:289762-290362:-1:exon

position:290362:-1
position: 290362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SIGIRR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SIGIRR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: single Ig IL-1-related receptor
translation: MADLCSVPPEILVPATNETLELALGSQVTLNCTVRWAATQPCQHLPAWAKDGQPLDTNSSQDTTWLAQNASEWLLGSVLQLNLTHDSDFGVFTCWVSNATATFTLRRVEAAGHAPAVLAALLVLVLLVLLAGLYVRCRLSLLLWYQNRYGELEINDGKLYDAYVSHATAPDDRKFVHFIVKPQLENRYGYKLFLDEQNILPNSEPSADLIMNVSRCRRLILVLSVAYLEQDWCNSSFREGLWRLLELSKKPIFIIFESQHREITHPAISLLKQYRNAVTLLVWRAGSMTPSSDFWKELCLALPRKISSQGTTGDPQTQLQEDKDPMLILHSSYLDSGGDLHPDGDLGTGLRGYVFGSPLPPRLRGPRTPMASAASTTEDTQLRDSHELDVSDLGSRNYGARTDFYCLVTEDDI
SIO_010081: SIGIRR
subclass of: SO_0000673
so part of: SIGIRR
location: complement(join(290166..290362,290497..290677,291206..291356,291432..291534,291611..291754,291868..292008,292175..292305,292388..292574,292875..292881))
location: region:290166-292881:-1
so has part: feature:292875-292881:-1:exon
so has part: feature:292388-292574:-1:exon
so has part: feature:292175-292305:-1:exon
so has part: feature:291868-292008:-1:exon
so has part: feature:291611-291754:-1:exon
so has part: feature:291432-291534:-1:exon
so has part: feature:291206-291356:-1:exon
so has part: feature:290497-290677:-1:exon
so has part: feature:290166-290362:-1:exon

XP_008504280.2
type: Protein
SIO_000068: ncbiprotein

position:290166:-1
position: 290166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292881:-1
position: 292881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292875-292881:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:292388-292574:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:292175-292305:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:291868-292008:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:291611-291754:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:291432-291534:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:291206-291356:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:290497-290677:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:290166-290362:-1:exon

ANO9
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ANO9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(297768..309627)
location: region:297768-309627:-1
so has part: feature:297768-309627:-1:exon
subclass of: SO_0000010

103539549
type: Gene
SIO_000068: ncbigene

position:297768:-1
position: 297768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309627:-1
position: 309627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297768-309627:-1:exon

ANO9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ANO9
product: anoctamin 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030451270.1
SIO_010081: ANO9
subclass of: SO_0000673
so part of: ANO9
location: complement(join(297768..297925,298596..298708,298806..298899,299098..299217,299795..299942,300116..300268,300761..300927,301093..301190,301372..301429,301713..301824,302370..302406,302499..302663,302858..302962,303420..303502,304468..304528,304864..304960,305073..305207,305970..306052,306251..306309,306542..306591,306831..306967,307195..307311,307545..307610,309546..309627))
location: region:297768-309627:-1
so has part: feature:309546-309627:-1:exon
so has part: feature:307545-307610:-1:exon
so has part: feature:307195-307311:-1:exon
so has part: feature:306831-306967:-1:exon
so has part: feature:306542-306591:-1:exon
so has part: feature:306251-306309:-1:exon
so has part: feature:305970-306052:-1:exon
so has part: feature:305073-305207:-1:exon
so has part: feature:304864-304960:-1:exon
so has part: feature:304468-304528:-1:exon
so has part: feature:303420-303502:-1:exon
so has part: feature:302858-302962:-1:exon
so has part: feature:302499-302663:-1:exon
so has part: feature:302370-302406:-1:exon
so has part: feature:301713-301824:-1:exon
so has part: feature:301372-301429:-1:exon
so has part: feature:301093-301190:-1:exon
so has part: feature:300761-300927:-1:exon
so has part: feature:300116-300268:-1:exon
so has part: feature:299795-299942:-1:exon
so has part: feature:299098-299217:-1:exon
so has part: feature:298806-298899:-1:exon
so has part: feature:298596-298708:-1:exon
so has part: feature:297768-297925:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:309546-309627:-1:exon

position:309546:-1
position: 309546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:307545-307610:-1:exon

position:307545:-1
position: 307545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307610:-1
position: 307610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:307195-307311:-1:exon

position:307195:-1
position: 307195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307311:-1
position: 307311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:306831-306967:-1:exon

position:306831:-1
position: 306831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306967:-1
position: 306967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:306542-306591:-1:exon

position:306542:-1
position: 306542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306591:-1
position: 306591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:306251-306309:-1:exon

position:306251:-1
position: 306251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306309:-1
position: 306309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:305970-306052:-1:exon

position:305970:-1
position: 305970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306052:-1
position: 306052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:305073-305207:-1:exon

position:305073:-1
position: 305073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305207:-1
position: 305207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:304864-304960:-1:exon

position:304864:-1
position: 304864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304960:-1
position: 304960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:304468-304528:-1:exon

position:304468:-1
position: 304468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304528:-1
position: 304528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:303420-303502:-1:exon

position:303420:-1
position: 303420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303502:-1
position: 303502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:302858-302962:-1:exon

position:302858:-1
position: 302858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302962:-1
position: 302962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:302499-302663:-1:exon

position:302499:-1
position: 302499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302663:-1
position: 302663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:302370-302406:-1:exon

position:302370:-1
position: 302370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302406:-1
position: 302406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:301713-301824:-1:exon

position:301713:-1
position: 301713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301824:-1
position: 301824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:301372-301429:-1:exon

position:301372:-1
position: 301372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301429:-1
position: 301429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:301093-301190:-1:exon

position:301093:-1
position: 301093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301190:-1
position: 301190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:300761-300927:-1:exon

position:300761:-1
position: 300761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300927:-1
position: 300927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:300116-300268:-1:exon

position:300116:-1
position: 300116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300268:-1
position: 300268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:299795-299942:-1:exon

position:299795:-1
position: 299795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299942:-1
position: 299942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:299098-299217:-1:exon

position:299098:-1
position: 299098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299217:-1
position: 299217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:298806-298899:-1:exon

position:298806:-1
position: 298806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298899:-1
position: 298899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:298596-298708:-1:exon

position:298596:-1
position: 298596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298708:-1
position: 298708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:297768-297925:-1:exon

position:297925:-1
position: 297925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANO9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ANO9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anoctamin-9
translation: MQDEILLTPWRRFSDEDREQFTPREEEKWDFVLVSDIHQVGSEKEMKRKKFLVELRKKGFIIKKIEDRKVFYGVRAPRQIFWKYQRLLRKPNSRLQSPGDNQEIPVTTRIRIVNFILQNTVTPDLEKLRDLMKKKVFEAMFPLHEKEEKREFLKEHWARWSEIFCPQPIEKIRCYFGEKVALYFAWLGWYTYLLGFAAAAGLVVFIAGITTFNSSQVSREICEATTTIMCPLCDQQCPFWLLSDTCTYAKVTHMIDNEGTVLFAMFMAIWATVFLELWKRQRATVVTDWDLYRWDEDEEELAIDLINNVQHEPQQYQHSYFRSTIILLLVLVMIAVMIGIAHALVIYRVIATALFTQSPFEFVREQANMVAMVTGAVLHYITIVIMTKVNRHVALFLCDLEKPRTFSQRENNFTVKIFTFQFFTNFSSLIYVAFFLGRINGHPGNYVRIAGKWRLEECHPSGCISDLFIQMAIVMLLKQTISNMMEYLIPWVKCKLCRQQWRPRKRRMMLGEEEEDEDPCKRQWLSNYQLNEVNIFSLFDEFLEMVIQYSFTTIFVAAFPLAPLLAFCNNLLEIRLDAIKMRRLSRRMVPRKANDIGIWLQVLEAIGILAVIGNGLVIAITSDFIPVQVYKYLYSPCLLGNNTDMDCTTGYINHSLSIFRIQDFEPHTKVPKTLPDFVREEIKECRYRDYRNPDDYSYTAQFWHIFAARLAFLILFEHVALCVKLIAAWYVPDVPQRVKNQFLDRQHNDLRKELSMMDFSTDV
SIO_010081: ANO9
subclass of: SO_0000673
so part of: ANO9
location: complement(join(297898..297925,298596..298708,298806..298899,299098..299217,299795..299942,300116..300268,300761..300927,301093..301190,301372..301429,301713..301824,302370..302406,302499..302663,302858..302962,303420..303502,304468..304528,304864..304960,305073..305207,305970..306052,306251..306309,306542..306591,306831..306967,307195..307311,307545..307610,309546..309551))
location: region:297898-309551:-1
so has part: feature:309546-309551:-1:exon
so has part: feature:307545-307610:-1:exon
so has part: feature:307195-307311:-1:exon
so has part: feature:306831-306967:-1:exon
so has part: feature:306542-306591:-1:exon
so has part: feature:306251-306309:-1:exon
so has part: feature:305970-306052:-1:exon
so has part: feature:305073-305207:-1:exon
so has part: feature:304864-304960:-1:exon
so has part: feature:304468-304528:-1:exon
so has part: feature:303420-303502:-1:exon
so has part: feature:302858-302962:-1:exon
so has part: feature:302499-302663:-1:exon
so has part: feature:302370-302406:-1:exon
so has part: feature:301713-301824:-1:exon
so has part: feature:301372-301429:-1:exon
so has part: feature:301093-301190:-1:exon
so has part: feature:300761-300927:-1:exon
so has part: feature:300116-300268:-1:exon
so has part: feature:299795-299942:-1:exon
so has part: feature:299098-299217:-1:exon
so has part: feature:298806-298899:-1:exon
so has part: feature:298596-298708:-1:exon
so has part: feature:297898-297925:-1:exon

XP_030307130.1
type: Protein
SIO_000068: ncbiprotein

position:297898:-1
position: 297898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309551:-1
position: 309551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309546-309551:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:307545-307610:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:307195-307311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:306831-306967:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:306542-306591:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:306251-306309:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:305970-306052:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:305073-305207:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:304864-304960:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:304468-304528:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:303420-303502:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:302858-302962:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:302499-302663:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:302370-302406:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:301713-301824:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:301372-301429:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:301093-301190:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:300761-300927:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:300116-300268:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:299795-299942:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:299098-299217:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:298806-298899:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:298596-298708:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:297898-297925:-1:exon

PTDSS2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PTDSS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 315503..352088
location: region:315503-352088:1
so has part: feature:315503-352088:1:exon
subclass of: SO_0000010

103539494
type: Gene
SIO_000068: ncbigene

position:315503:1
position: 315503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352088:1
position: 352088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315503-352088:1:exon

PTDSS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PTDSS2
product: phosphatidylserine synthase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 2 long SRA reads, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_008506003.2
SIO_010081: PTDSS2
subclass of: SO_0000673
so part of: PTDSS2
location: join(315503..315753,325048..325149,329973..330055,335944..336011,338400..338534,339236..339286,340518..340631,342132..342250,342953..343067,344617..344762,349374..349559,349799..352088)
location: region:315503-352088:1
so has part: feature:315503-315753:1:exon
so has part: feature:325048-325149:1:exon
so has part: feature:329973-330055:1:exon
so has part: feature:335944-336011:1:exon
so has part: feature:338400-338534:1:exon
so has part: feature:339236-339286:1:exon
so has part: feature:340518-340631:1:exon
so has part: feature:342132-342250:1:exon
so has part: feature:342953-343067:1:exon
so has part: feature:344617-344762:1:exon
so has part: feature:349374-349559:1:exon
so has part: feature:349799-352088:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:315503-315753:1:exon

position:315753:1
position: 315753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:325048-325149:1:exon

position:325048:1
position: 325048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325149:1
position: 325149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:329973-330055:1:exon

position:329973:1
position: 329973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330055:1
position: 330055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:335944-336011:1:exon

position:335944:1
position: 335944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336011:1
position: 336011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:338400-338534:1:exon

position:338400:1
position: 338400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338534:1
position: 338534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:339236-339286:1:exon

position:339236:1
position: 339236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339286:1
position: 339286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:340518-340631:1:exon

position:340518:1
position: 340518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340631:1
position: 340631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:342132-342250:1:exon

position:342132:1
position: 342132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342250:1
position: 342250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:342953-343067:1:exon

position:342953:1
position: 342953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343067:1
position: 343067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:344617-344762:1:exon

position:344617:1
position: 344617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344762:1
position: 344762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:349374-349559:1:exon

position:349374:1
position: 349374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349559:1
position: 349559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:349799-352088:1:exon

position:349799:1
position: 349799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTDSS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PTDSS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylserine synthase 2 isoform X1
translation: MRRGERRGPGPVPGKGALEEQQPPPLPNGGGPERVRENPALRRSTESEVYDDGTNTFFWRAHTLTVLFILTCALGYVTLLEETPQDTAYNTKRGIVASILVFLCFGVTQAKDGPFSRPHPAYWRFWLCVSVVYELFLIFILFQTVQDGRKFMKYIDPHLGVPLPERDYGGNCLIYDPGNETDPFHNIWDKLDGFVPAHFFGWYLKTLMIRDWWMCMIISVMFEFLEYSLEHQLPNFSECWWDHWIMDVILCNGLGIYCGMKTLSWLSLKTYKWQGLWNIPTYKGKMKRIVFQFTPYSWVKFEWKPASSLRRWLAVCGIIFVFLLAELNTFYLKFVLWMPPEHYLVLLRLVFFVNVGGVAMREIYDFMDDPKFHKKLGQQAWLVAAITATEFLIVVKYDPYTLTLSLPFYITQCWILGIILVLTWTAWRFFIRDITLRYKEIRRQKQEHRHEKEKCLSNGDGHSAMLDEHSGNKLKERKL
SIO_010081: PTDSS2
subclass of: SO_0000673
so part of: PTDSS2
location: join(315578..315753,325048..325149,329973..330055,335944..336011,338400..338534,339236..339286,340518..340631,342132..342250,342953..343067,344617..344762,349374..349559,349799..349943)
location: region:315578-349943:1
so has part: feature:315578-315753:1:exon
so has part: feature:325048-325149:1:exon
so has part: feature:329973-330055:1:exon
so has part: feature:335944-336011:1:exon
so has part: feature:338400-338534:1:exon
so has part: feature:339236-339286:1:exon
so has part: feature:340518-340631:1:exon
so has part: feature:342132-342250:1:exon
so has part: feature:342953-343067:1:exon
so has part: feature:344617-344762:1:exon
so has part: feature:349374-349559:1:exon
so has part: feature:349799-349943:1:exon

XP_008504225.1
type: Protein
SIO_000068: ncbiprotein

position:315578:1
position: 315578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349943:1
position: 349943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315578-315753:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:325048-325149:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:329973-330055:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:335944-336011:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:338400-338534:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:339236-339286:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:340518-340631:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:342132-342250:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:342953-343067:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:344617-344762:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:349374-349559:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:349799-349943:1:exon

PTDSS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PTDSS2
product: phosphatidylserine synthase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_030451071.1
SIO_010081: PTDSS2
subclass of: SO_0000673
so part of: PTDSS2
location: join(316827..317125,325048..325149,329973..330055,335944..336011,338400..338534,339236..339286,340518..340631,342132..342250,342953..343067,344617..344762,349374..349559,349799..351148)
location: region:316827-351148:1
so has part: feature:316827-317125:1:exon
so has part: feature:325048-325149:1:exon
so has part: feature:329973-330055:1:exon
so has part: feature:335944-336011:1:exon
so has part: feature:338400-338534:1:exon
so has part: feature:339236-339286:1:exon
so has part: feature:340518-340631:1:exon
so has part: feature:342132-342250:1:exon
so has part: feature:342953-343067:1:exon
so has part: feature:344617-344762:1:exon
so has part: feature:349374-349559:1:exon
so has part: feature:349799-351148:1:exon

position:316827:1
position: 316827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351148:1
position: 351148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316827-317125:1:exon

position:317125:1
position: 317125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:325048-325149:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:329973-330055:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:335944-336011:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:338400-338534:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:339236-339286:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:340518-340631:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:342132-342250:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:342953-343067:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:344617-344762:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:349374-349559:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:349799-351148:1:exon

PTDSS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PTDSS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylserine synthase 2 isoform X2
translation: MENGRAHTLTVLFILTCALGYVTLLEETPQDTAYNTKRGIVASILVFLCFGVTQAKDGPFSRPHPAYWRFWLCVSVVYELFLIFILFQTVQDGRKFMKYIDPHLGVPLPERDYGGNCLIYDPGNETDPFHNIWDKLDGFVPAHFFGWYLKTLMIRDWWMCMIISVMFEFLEYSLEHQLPNFSECWWDHWIMDVILCNGLGIYCGMKTLSWLSLKTYKWQGLWNIPTYKGKMKRIVFQFTPYSWVKFEWKPASSLRRWLAVCGIIFVFLLAELNTFYLKFVLWMPPEHYLVLLRLVFFVNVGGVAMREIYDFMDDPKFHKKLGQQAWLVAAITATEFLIVVKYDPYTLTLSLPFYITQCWILGIILVLTWTAWRFFIRDITLRYKEIRRQKQEHRHEKEKCLSNGDGHSAMLDEHSGNKLKERKL
SIO_010081: PTDSS2
subclass of: SO_0000673
so part of: PTDSS2
location: join(317115..317125,325048..325149,329973..330055,335944..336011,338400..338534,339236..339286,340518..340631,342132..342250,342953..343067,344617..344762,349374..349559,349799..349943)
location: region:317115-349943:1
so has part: feature:317115-317125:1:exon
so has part: feature:325048-325149:1:exon
so has part: feature:329973-330055:1:exon
so has part: feature:335944-336011:1:exon
so has part: feature:338400-338534:1:exon
so has part: feature:339236-339286:1:exon
so has part: feature:340518-340631:1:exon
so has part: feature:342132-342250:1:exon
so has part: feature:342953-343067:1:exon
so has part: feature:344617-344762:1:exon
so has part: feature:349374-349559:1:exon
so has part: feature:349799-349943:1:exon

XP_030306931.1
type: Protein
SIO_000068: ncbiprotein

position:317115:1
position: 317115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317115-317125:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:325048-325149:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:329973-330055:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:335944-336011:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:338400-338534:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:339236-339286:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:340518-340631:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:342132-342250:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:342953-343067:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:344617-344762:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:349374-349559:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:349799-349943:1:exon

PTDSS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PTDSS2
product: phosphatidylserine synthase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030451072.1
SIO_010081: PTDSS2
subclass of: SO_0000673
so part of: PTDSS2
location: join(325106..325149,335944..336011,338400..338534,339236..339286,340518..340631,342132..342250,342953..343067,344617..344762,349374..349559,349799..351148)
location: region:325106-351148:1
so has part: feature:325106-325149:1:exon
so has part: feature:335944-336011:1:exon
so has part: feature:338400-338534:1:exon
so has part: feature:339236-339286:1:exon
so has part: feature:340518-340631:1:exon
so has part: feature:342132-342250:1:exon
so has part: feature:342953-343067:1:exon
so has part: feature:344617-344762:1:exon
so has part: feature:349374-349559:1:exon
so has part: feature:349799-351148:1:exon

position:325106:1
position: 325106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325106-325149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:335944-336011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:338400-338534:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:339236-339286:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:340518-340631:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:342132-342250:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:342953-343067:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:344617-344762:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:349374-349559:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:349799-351148:1:exon

PTDSS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PTDSS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylserine synthase 2 isoform X3
translation: MKYIDPHLGVPLPERDYGGNCLIYDPGNETDPFHNIWDKLDGFVPAHFFGWYLKTLMIRDWWMCMIISVMFEFLEYSLEHQLPNFSECWWDHWIMDVILCNGLGIYCGMKTLSWLSLKTYKWQGLWNIPTYKGKMKRIVFQFTPYSWVKFEWKPASSLRRWLAVCGIIFVFLLAELNTFYLKFVLWMPPEHYLVLLRLVFFVNVGGVAMREIYDFMDDPKFHKKLGQQAWLVAAITATEFLIVVKYDPYTLTLSLPFYITQCWILGIILVLTWTAWRFFIRDITLRYKEIRRQKQEHRHEKEKCLSNGDGHSAMLDEHSGNKLKERKL
SIO_010081: PTDSS2
subclass of: SO_0000673
so part of: PTDSS2
location: join(338424..338534,339236..339286,340518..340631,342132..342250,342953..343067,344617..344762,349374..349559,349799..349943)
location: region:338424-349943:1
so has part: feature:338424-338534:1:exon
so has part: feature:339236-339286:1:exon
so has part: feature:340518-340631:1:exon
so has part: feature:342132-342250:1:exon
so has part: feature:342953-343067:1:exon
so has part: feature:344617-344762:1:exon
so has part: feature:349374-349559:1:exon
so has part: feature:349799-349943:1:exon

XP_030306932.1
type: Protein
SIO_000068: ncbiprotein

position:338424:1
position: 338424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338424-338534:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:339236-339286:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:340518-340631:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:342132-342250:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:342953-343067:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:344617-344762:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:349374-349559:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:349799-349943:1:exon

SYT12
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SYT12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 353203..363285
location: region:353203-363285:1
so has part: feature:353203-363285:1:exon
subclass of: SO_0000010

103539550
type: Gene
SIO_000068: ncbigene

position:353203:1
position: 353203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363285:1
position: 363285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353203-363285:1:exon

SYT12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SYT12
product: synaptotagmin 12, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030451074.1
SIO_010081: SYT12
subclass of: SO_0000673
so part of: SYT12
location: join(353203..353291,357216..357279,359113..359306,359728..360120,360943..361158,361379..361499,361708..361841,362118..362995)
location: region:353203-362995:1
so has part: feature:353203-353291:1:exon
so has part: feature:357216-357279:1:exon
so has part: feature:359113-359306:1:exon
so has part: feature:359728-360120:1:exon
so has part: feature:360943-361158:1:exon
so has part: feature:361379-361499:1:exon
so has part: feature:361708-361841:1:exon
so has part: feature:362118-362995:1:exon

position:362995:1
position: 362995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353203-353291:1:exon

position:353291:1
position: 353291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:357216-357279:1:exon

position:357216:1
position: 357216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357279:1
position: 357279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:359113-359306:1:exon

position:359113:1
position: 359113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359306:1
position: 359306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:359728-360120:1:exon

position:359728:1
position: 359728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360120:1
position: 360120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:360943-361158:1:exon

position:360943:1
position: 360943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361158:1
position: 361158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:361379-361499:1:exon

position:361379:1
position: 361379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361499:1
position: 361499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:361708-361841:1:exon

position:361708:1
position: 361708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361841:1
position: 361841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:362118-362995:1:exon

position:362118:1
position: 362118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SYT12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SYT12
product: synaptotagmin 12, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 long SRA reads, 4 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030451073.1
SIO_010081: SYT12
subclass of: SO_0000673
so part of: SYT12
location: join(353803..353947,357216..357279,359113..359306,359728..360120,360943..361158,361379..361499,361708..361841,362118..363285)
location: region:353803-363285:1
so has part: feature:353803-353947:1:exon
so has part: feature:357216-357279:1:exon
so has part: feature:359113-359306:1:exon
so has part: feature:359728-360120:1:exon
so has part: feature:360943-361158:1:exon
so has part: feature:361379-361499:1:exon
so has part: feature:361708-361841:1:exon
so has part: feature:362118-363285:1:exon

position:353803:1
position: 353803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353803-353947:1:exon

position:353947:1
position: 353947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:357216-357279:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:359113-359306:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:359728-360120:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:360943-361158:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:361379-361499:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:361708-361841:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:362118-363285:1:exon

SYT12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SYT12
product: synaptotagmin 12, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030451076.1
SIO_010081: SYT12
subclass of: SO_0000673
so part of: SYT12
location: join(354826..354927,357216..357279,359113..359306,359728..360120,360943..361158,361379..361499,361708..361841,362118..362995)
location: region:354826-362995:1
so has part: feature:354826-354927:1:exon
so has part: feature:357216-357279:1:exon
so has part: feature:359113-359306:1:exon
so has part: feature:359728-360120:1:exon
so has part: feature:360943-361158:1:exon
so has part: feature:361379-361499:1:exon
so has part: feature:361708-361841:1:exon
so has part: feature:362118-362995:1:exon

position:354826:1
position: 354826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354826-354927:1:exon

position:354927:1
position: 354927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:357216-357279:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:359113-359306:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:359728-360120:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:360943-361158:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:361379-361499:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:361708-361841:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:362118-362995:1:exon

SYT12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SYT12
product: synaptotagmin 12, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030451075.1
SIO_010081: SYT12
subclass of: SO_0000673
so part of: SYT12
location: join(355165..355177,357216..357279,359113..359306,359728..360120,360943..361158,361379..361499,361708..361841,362118..362995)
location: region:355165-362995:1
so has part: feature:355165-355177:1:exon
so has part: feature:357216-357279:1:exon
so has part: feature:359113-359306:1:exon
so has part: feature:359728-360120:1:exon
so has part: feature:360943-361158:1:exon
so has part: feature:361379-361499:1:exon
so has part: feature:361708-361841:1:exon
so has part: feature:362118-362995:1:exon

position:355165:1
position: 355165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355165-355177:1:exon

position:355177:1
position: 355177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:357216-357279:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:359113-359306:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:359728-360120:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:360943-361158:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:361379-361499:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:361708-361841:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:362118-362995:1:exon

SYT12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SYT12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-12
translation: MDTAQMSRAPVNVASSPPRWEIGIYATGALVLLGVAALNLWKLWRSGTYPAPSPFPNYDYRYLEQKYGAACEDVRHKRGMVLGSQRVLEKTSPIRKPSLRVDDTFESINELGSLELMSKDLGLAHYGPLKKSISADSLSSISSIGNNFGQDFTVGQVEVSMEYDGKAAALHVTLLQGKDLLEKEDAHFESCFIRISLLPAEQIVGISRIQRSAYSVAFDEHFSIPLDPSALEENVLRFCAFGIDEDERSVSTGLAEIKLSDLDLTTRPFTAWLYLQDTNKAVDTVGEILLSLSYLPTAERLTVVVVKAKNLVWTNGKVTADPFVKVYLLQDGRKISKKKTAVKRDDTNPVFNEAMIFSVPAIVLQDLSLRVTVAECGEDGRADNTGHVLIGPTASGMGTTHWNQMLATLRKPISMWHPLRRN
SIO_010081: SYT12
subclass of: SO_0000673
so part of: SYT12
location: join(357243..357279,359113..359306,359728..360120,360943..361158,361379..361499,361708..361841,362118..362291)
location: region:357243-362291:1
so has part: feature:357243-357279:1:exon
so has part: feature:359113-359306:1:exon
so has part: feature:359728-360120:1:exon
so has part: feature:360943-361158:1:exon
so has part: feature:361379-361499:1:exon
so has part: feature:361708-361841:1:exon
so has part: feature:362118-362291:1:exon

XP_030306933.1
type: Protein
SIO_000068: ncbiprotein

position:357243:1
position: 357243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362291:1
position: 362291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357243-357279:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:359113-359306:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:359728-360120:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:360943-361158:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:361379-361499:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:361708-361841:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:362118-362291:1:exon

SYT12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SYT12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-12
translation: MDTAQMSRAPVNVASSPPRWEIGIYATGALVLLGVAALNLWKLWRSGTYPAPSPFPNYDYRYLEQKYGAACEDVRHKRGMVLGSQRVLEKTSPIRKPSLRVDDTFESINELGSLELMSKDLGLAHYGPLKKSISADSLSSISSIGNNFGQDFTVGQVEVSMEYDGKAAALHVTLLQGKDLLEKEDAHFESCFIRISLLPAEQIVGISRIQRSAYSVAFDEHFSIPLDPSALEENVLRFCAFGIDEDERSVSTGLAEIKLSDLDLTTRPFTAWLYLQDTNKAVDTVGEILLSLSYLPTAERLTVVVVKAKNLVWTNGKVTADPFVKVYLLQDGRKISKKKTAVKRDDTNPVFNEAMIFSVPAIVLQDLSLRVTVAECGEDGRADNTGHVLIGPTASGMGTTHWNQMLATLRKPISMWHPLRRN
SIO_010081: SYT12
subclass of: SO_0000673
so part of: SYT12
location: join(357243..357279,359113..359306,359728..360120,360943..361158,361379..361499,361708..361841,362118..362291)
location: region:357243-362291:1
so has part: feature:357243-357279:1:exon
so has part: feature:359113-359306:1:exon
so has part: feature:359728-360120:1:exon
so has part: feature:360943-361158:1:exon
so has part: feature:361379-361499:1:exon
so has part: feature:361708-361841:1:exon
so has part: feature:362118-362291:1:exon

XP_030306934.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357243-357279:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:359113-359306:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:359728-360120:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:360943-361158:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:361379-361499:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:361708-361841:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:362118-362291:1:exon

SYT12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SYT12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-12
translation: MDTAQMSRAPVNVASSPPRWEIGIYATGALVLLGVAALNLWKLWRSGTYPAPSPFPNYDYRYLEQKYGAACEDVRHKRGMVLGSQRVLEKTSPIRKPSLRVDDTFESINELGSLELMSKDLGLAHYGPLKKSISADSLSSISSIGNNFGQDFTVGQVEVSMEYDGKAAALHVTLLQGKDLLEKEDAHFESCFIRISLLPAEQIVGISRIQRSAYSVAFDEHFSIPLDPSALEENVLRFCAFGIDEDERSVSTGLAEIKLSDLDLTTRPFTAWLYLQDTNKAVDTVGEILLSLSYLPTAERLTVVVVKAKNLVWTNGKVTADPFVKVYLLQDGRKISKKKTAVKRDDTNPVFNEAMIFSVPAIVLQDLSLRVTVAECGEDGRADNTGHVLIGPTASGMGTTHWNQMLATLRKPISMWHPLRRN
SIO_010081: SYT12
subclass of: SO_0000673
so part of: SYT12
location: join(357243..357279,359113..359306,359728..360120,360943..361158,361379..361499,361708..361841,362118..362291)
location: region:357243-362291:1
so has part: feature:357243-357279:1:exon
so has part: feature:359113-359306:1:exon
so has part: feature:359728-360120:1:exon
so has part: feature:360943-361158:1:exon
so has part: feature:361379-361499:1:exon
so has part: feature:361708-361841:1:exon
so has part: feature:362118-362291:1:exon

XP_030306935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357243-357279:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:359113-359306:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:359728-360120:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:360943-361158:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:361379-361499:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:361708-361841:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:362118-362291:1:exon

SYT12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SYT12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-12
translation: MDTAQMSRAPVNVASSPPRWEIGIYATGALVLLGVAALNLWKLWRSGTYPAPSPFPNYDYRYLEQKYGAACEDVRHKRGMVLGSQRVLEKTSPIRKPSLRVDDTFESINELGSLELMSKDLGLAHYGPLKKSISADSLSSISSIGNNFGQDFTVGQVEVSMEYDGKAAALHVTLLQGKDLLEKEDAHFESCFIRISLLPAEQIVGISRIQRSAYSVAFDEHFSIPLDPSALEENVLRFCAFGIDEDERSVSTGLAEIKLSDLDLTTRPFTAWLYLQDTNKAVDTVGEILLSLSYLPTAERLTVVVVKAKNLVWTNGKVTADPFVKVYLLQDGRKISKKKTAVKRDDTNPVFNEAMIFSVPAIVLQDLSLRVTVAECGEDGRADNTGHVLIGPTASGMGTTHWNQMLATLRKPISMWHPLRRN
SIO_010081: SYT12
subclass of: SO_0000673
so part of: SYT12
location: join(357243..357279,359113..359306,359728..360120,360943..361158,361379..361499,361708..361841,362118..362291)
location: region:357243-362291:1
so has part: feature:357243-357279:1:exon
so has part: feature:359113-359306:1:exon
so has part: feature:359728-360120:1:exon
so has part: feature:360943-361158:1:exon
so has part: feature:361379-361499:1:exon
so has part: feature:361708-361841:1:exon
so has part: feature:362118-362291:1:exon

XP_030306936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357243-357279:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:359113-359306:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:359728-360120:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:360943-361158:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:361379-361499:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:361708-361841:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:362118-362291:1:exon

IGHMBP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: IGHMBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(364470..387338)
location: region:364470-387338:-1
so has part: feature:364470-387338:-1:exon
subclass of: SO_0000010

103539551
type: Gene
SIO_000068: ncbigene

position:364470:-1
position: 364470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387338:-1
position: 387338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364470-387338:-1:exon

IGHMBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: IGHMBP2
product: immunoglobulin mu DNA binding protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030451046.1
SIO_010081: IGHMBP2
subclass of: SO_0000673
so part of: IGHMBP2
location: complement(join(364470..364919,365244..365416,365832..366680,368863..368986,369298..369392,369545..369663,371551..371733,376150..376324,378125..378272,381013..381222,381502..381665,384547..384644,385367..385559,386377..386546,387263..387338))
location: region:364470-387338:-1
so has part: feature:387263-387338:-1:exon
so has part: feature:386377-386546:-1:exon
so has part: feature:385367-385559:-1:exon
so has part: feature:384547-384644:-1:exon
so has part: feature:381502-381665:-1:exon
so has part: feature:381013-381222:-1:exon
so has part: feature:378125-378272:-1:exon
so has part: feature:376150-376324:-1:exon
so has part: feature:371551-371733:-1:exon
so has part: feature:369545-369663:-1:exon
so has part: feature:369298-369392:-1:exon
so has part: feature:368863-368986:-1:exon
so has part: feature:365832-366680:-1:exon
so has part: feature:365244-365416:-1:exon
so has part: feature:364470-364919:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:387263-387338:-1:exon

position:387263:-1
position: 387263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:386377-386546:-1:exon

position:386377:-1
position: 386377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386546:-1
position: 386546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:385367-385559:-1:exon

position:385367:-1
position: 385367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385559:-1
position: 385559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:384547-384644:-1:exon

position:384547:-1
position: 384547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384644:-1
position: 384644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:381502-381665:-1:exon

position:381502:-1
position: 381502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381665:-1
position: 381665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:381013-381222:-1:exon

position:381013:-1
position: 381013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381222:-1
position: 381222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:378125-378272:-1:exon

position:378125:-1
position: 378125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378272:-1
position: 378272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:376150-376324:-1:exon

position:376150:-1
position: 376150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376324:-1
position: 376324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:371551-371733:-1:exon

position:371551:-1
position: 371551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371733:-1
position: 371733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:369545-369663:-1:exon

position:369545:-1
position: 369545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369663:-1
position: 369663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:369298-369392:-1:exon

position:369298:-1
position: 369298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369392:-1
position: 369392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:368863-368986:-1:exon

position:368863:-1
position: 368863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368986:-1
position: 368986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:365832-366680:-1:exon

position:365832:-1
position: 365832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366680:-1
position: 366680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:365244-365416:-1:exon

position:365244:-1
position: 365244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365416:-1
position: 365416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:364470-364919:-1:exon

position:364919:-1
position: 364919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IGHMBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: IGHMBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-binding protein SMUBP-2
translation: MAAEAAERQLRLLREEREAELAQSRTWQQSVSLRELQHRGLCLLHLRAAAHRTGLYGRLLVTFQPRKHPPDTELPYNSFGPGDIVGLYDSAGQGDPLSSGVITGVTPRAVTVAFEESQEGLPSLDPEGSYRLLKLANDVTYNRMRKALHTLHGYRAGPAARLIDVLFFNSAPSPASDTKPLKLYNTSLDVSQQEAVSFCLAQRELAIVHGPPGTGKTTTLVEIILQAVQQGLKVLCCAPSNVAVDNLVERLAAHSTHSTRILRLGHPARLLEPIQQHSLDAILARGDNAQIVADIRKDIDQAFAKSKKAQDKGERSHFLSEIKALRKELKEREETAMAAALTHASVILATNTGASSDGPLKLLPENHFDLVVIDECAQALEASCWIPLLKAPRCILAGDHKQLPPTIISHKAAAEGLSLSLMERLLQRYGEQVVRMLRVQYRMHQDIMHWASTELYGGRLTAHPSVAQHLLKDLPGVTSTEETTIPLLLIDTAGCGLFELEVEDEQSKGNPGEVQLAGLHIQALVEAGVKARDIAVVAPYNLQVDMLREHLCHRYPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRVNVAVTRARRHVAIVCDSHTVSTQPFLQRLLGHFSQHGEVRTAFQYLDNLVPQNYPTGGRGERGKSGAKRPKTPPGKKPNTGAPKAGCQGKEKAPTSPETGGTGGQSVGTRGDQLSPETGGAGGQSTGVTDVAERLKATLEAFLESRETQMDFPPSLSSHARMLVHLLAEERGLQHLSTGQGRARFISVRKKGSVEPPRAAAPSPCQGLPLAPQPQPPCRDTPGPAEPEGSSSGKVDLKSLHLERVRREEAARKAREPGAAGQGSSSRRKEKGKPSATSGAEEDFDALIAAAVKADTTCGFPRCQASVTTLGQLCPHCKRSYCLSHHIPEVHGCGEKAKAQARQRISREGVLYPGSGSKDKSLDPARRAHLQRRLDKKLSELTSQRKSKKKEKEK
SIO_010081: IGHMBP2
subclass of: SO_0000673
so part of: IGHMBP2
location: complement(join(364722..364919,365244..365416,365832..366680,368863..368986,369298..369392,369545..369663,371551..371733,376150..376324,378125..378272,381013..381222,381502..381665,384547..384644,385367..385559,386377..386546,387263..387336))
location: region:364722-387336:-1
so has part: feature:387263-387336:-1:exon
so has part: feature:386377-386546:-1:exon
so has part: feature:385367-385559:-1:exon
so has part: feature:384547-384644:-1:exon
so has part: feature:381502-381665:-1:exon
so has part: feature:381013-381222:-1:exon
so has part: feature:378125-378272:-1:exon
so has part: feature:376150-376324:-1:exon
so has part: feature:371551-371733:-1:exon
so has part: feature:369545-369663:-1:exon
so has part: feature:369298-369392:-1:exon
so has part: feature:368863-368986:-1:exon
so has part: feature:365832-366680:-1:exon
so has part: feature:365244-365416:-1:exon
so has part: feature:364722-364919:-1:exon

XP_030306906.1
type: Protein
SIO_000068: ncbiprotein

position:364722:-1
position: 364722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387336:-1
position: 387336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387263-387336:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:386377-386546:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:385367-385559:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384547-384644:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:381502-381665:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:381013-381222:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:378125-378272:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:376150-376324:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:371551-371733:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:369545-369663:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:369298-369392:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:368863-368986:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:365832-366680:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:365244-365416:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:364722-364919:-1:exon

MRPL21
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: MRPL21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 387306..397717
location: region:387306-397717:1
so has part: feature:387306-397717:1:exon
subclass of: SO_0000010

103539552
type: Gene
SIO_000068: ncbigene

position:387306:1
position: 387306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397717:1
position: 397717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387306-397717:1:exon

MRPL21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MRPL21
product: mitochondrial ribosomal protein L21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030451085.1
SIO_010081: MRPL21
subclass of: SO_0000673
so part of: MRPL21
location: join(387306..387409,388449..388509,389158..389243,391377..391540,392896..392948,396875..396978,397537..397717)
location: region:387306-397717:1
so has part: feature:387306-387409:1:exon
so has part: feature:388449-388509:1:exon
so has part: feature:389158-389243:1:exon
so has part: feature:391377-391540:1:exon
so has part: feature:392896-392948:1:exon
so has part: feature:396875-396978:1:exon
so has part: feature:397537-397717:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:387306-387409:1:exon

position:387409:1
position: 387409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:388449-388509:1:exon

position:388449:1
position: 388449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388509:1
position: 388509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:389158-389243:1:exon

position:389158:1
position: 389158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389243:1
position: 389243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:391377-391540:1:exon

position:391377:1
position: 391377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391540:1
position: 391540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:392896-392948:1:exon

position:392896:1
position: 392896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392948:1
position: 392948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:396875-396978:1:exon

position:396875:1
position: 396875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396978:1
position: 396978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:397537-397717:1:exon

position:397537:1
position: 397537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MRPL21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MRPL21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L21, mitochondrial
translation: MAGPRARAAALLLSSVVRHQSSQSISPQHGLVAKTSLTSPPWPEVKLPDPAEEAKYHAEVVQKVKELIAAGRYGRLFAVVHFASKQWKITSEDLIMMDNVLEAECGDRIRMEKVLLVGADDFTLIGRPLLGKDLVRVEATVIEKTESWPKLNVRFWKRHNYERRKIITNPQTVLRINTIEIFPCLS
SIO_010081: MRPL21
subclass of: SO_0000673
so part of: MRPL21
location: join(387382..387409,388449..388509,389158..389243,391377..391540,392896..392948,396875..396978,397537..397601)
location: region:387382-397601:1
so has part: feature:387382-387409:1:exon
so has part: feature:388449-388509:1:exon
so has part: feature:389158-389243:1:exon
so has part: feature:391377-391540:1:exon
so has part: feature:392896-392948:1:exon
so has part: feature:396875-396978:1:exon
so has part: feature:397537-397601:1:exon

XP_030306945.1
type: Protein
SIO_000068: ncbiprotein

position:387382:1
position: 387382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397601:1
position: 397601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387382-387409:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:388449-388509:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:389158-389243:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:391377-391540:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:392896-392948:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:396875-396978:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:397537-397601:1:exon

LOC103539553
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103539553
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 404036..408943
location: region:404036-408943:1
so has part: feature:404036-408943:1:exon
subclass of: SO_0000010

103539553
type: Gene
SIO_000068: ncbigene

position:404036:1
position: 404036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408943:1
position: 408943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404036-408943:1:exon

LOC103539553
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103539553
product: ras-related and estrogen-regulated growth inhibitor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030451084.1
SIO_010081: LOC103539553
subclass of: SO_0000673
so part of: LOC103539553
location: join(404036..404180,406653..406709,407039..407112,407619..408943)
location: region:404036-408943:1
so has part: feature:404036-404180:1:exon
so has part: feature:406653-406709:1:exon
so has part: feature:407039-407112:1:exon
so has part: feature:407619-408943:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:404036-404180:1:exon

position:404180:1
position: 404180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:406653-406709:1:exon

position:406653:1
position: 406653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406709:1
position: 406709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:407039-407112:1:exon

position:407039:1
position: 407039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407112:1
position: 407112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:407619-408943:1:exon

position:407619:1
position: 407619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC103539553
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103539553
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related and estrogen-regulated growth inhibitor
translation: MSFPRPLRRSVSLSPARTLRLVVLGQSAVGKTALTVRFITRRFIGDYDPTLEMIYRHVAIMDGEMVNFEILDTAGQEEDSLQIEEKIKWGDGFAVVYSVTDRCSFDEVMRLCFLINHIHSSPKRSSASEQPPVVIVGNKKDLQFDRMVSTEDGENLSKALKLPFYEISTRDSYEETVVVFNTLYQELMRQGHFSPGSFKRRTVSKLMEKIPKMQASSTLNSAGRSLSFNSFRDYIPE
SIO_010081: LOC103539553
subclass of: SO_0000673
so part of: LOC103539553
location: join(404084..404180,406653..406709,407039..407112,407619..408104)
location: region:404084-408104:1
so has part: feature:404084-404180:1:exon
so has part: feature:406653-406709:1:exon
so has part: feature:407039-407112:1:exon
so has part: feature:407619-408104:1:exon

XP_030306944.1
type: Protein
SIO_000068: ncbiprotein

position:404084:1
position: 404084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408104:1
position: 408104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404084-404180:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:406653-406709:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:407039-407112:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:407619-408104:1:exon

LOC103539554
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103539554
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 413549..423548
location: region:413549-423548:1
so has part: feature:413549-423548:1:exon
subclass of: SO_0000010

103539554
type: Gene
SIO_000068: ncbigene

position:413549:1
position: 413549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423548:1
position: 423548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413549-423548:1:exon

LOC103539554
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103539554
product: SITS-binding protein
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_008506065.2
SIO_010081: LOC103539554
subclass of: SO_0000673
so part of: LOC103539554
location: join(413549..413624,414112..414614,416917..417088,417893..418100,418202..418353,419111..419311,419925..420193,421280..421416,421690..421811,422319..422498,423242..423548)
location: region:413549-423548:1
so has part: feature:413549-413624:1:exon
so has part: feature:414112-414614:1:exon
so has part: feature:416917-417088:1:exon
so has part: feature:417893-418100:1:exon
so has part: feature:418202-418353:1:exon
so has part: feature:419111-419311:1:exon
so has part: feature:419925-420193:1:exon
so has part: feature:421280-421416:1:exon
so has part: feature:421690-421811:1:exon
so has part: feature:422319-422498:1:exon
so has part: feature:423242-423548:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:413549-413624:1:exon

position:413624:1
position: 413624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:414112-414614:1:exon

position:414112:1
position: 414112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414614:1
position: 414614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:416917-417088:1:exon

position:416917:1
position: 416917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417088:1
position: 417088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:417893-418100:1:exon

position:417893:1
position: 417893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418100:1
position: 418100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:418202-418353:1:exon

position:418202:1
position: 418202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418353:1
position: 418353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:419111-419311:1:exon

position:419111:1
position: 419111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419311:1
position: 419311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:419925-420193:1:exon

position:419925:1
position: 419925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420193:1
position: 420193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:421280-421416:1:exon

position:421280:1
position: 421280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421416:1
position: 421416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:421690-421811:1:exon

position:421690:1
position: 421690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421811:1
position: 421811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:422319-422498:1:exon

position:422319:1
position: 422319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422498:1
position: 422498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:423242-423548:1:exon

position:423242:1
position: 423242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC103539554
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103539554
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: SITS-binding protein
translation: MPLSRHTAQIPESTWTLGIREMTEPWKGALGCLGVAVFFTMTIGIISWQALEQSPEEWVLRGGAGGMLWERRRGALLLRGLPGGRTAAVIAVGGVPAAEPPPPRDYCWHDGRLFCYAWEEDAELRLSLETPPAPNTECYSVHWTPLRPDVRLKDCFSMANISWYGGATTRTPRWPLNRAESQAQPFVSSDFARNPEGFGPVLDRYFLGSTGVTVTVAPEVPLFLWLESDRHFCLGTRAGMAAVPLRYQLCVSPDVAAAQRHLGGQRGGQARALPDMALLGAPIWRYQGPEGSAAKIKRGLRSLARRLKRHRLQEGVLALGEHSTIVLAAEDNVPEAGGKRQESGGAWAPSLISPLQLSITLSPYVPVSSRLFLRSLRDHQDLGCSWLGLQPSPGGCSIPLLTMWRGQLCARLNVTSKVALSWYLARARRLQQELGATYVAFEGVEGNSFLEQAVPPPPELEGDRYTQALVAALARLGNATIISAGASSSHLPFFIQMSPLHSDWSHAGLKGLIPSVLHYSLLGYNFFIPDVVGGSLAGDTPGDTELYVRWLQIVTFLPVMAFSKPPWLCCDAWVLNLTRQCIERHRDFVVPLLIRSSQEWLRMGFPIFRPAWWLSPTDPTALTIEDEFLIGDEVLVAPVTEKGQTWRDIYLPGEGHLWMDTSTARVFDGGTILRNYSASLEEVPVFIKTS
SIO_010081: LOC103539554
subclass of: SO_0000673
so part of: LOC103539554
location: join(414155..414614,416917..417088,417893..418100,418202..418353,419111..419311,419925..420193,421280..421416,421690..421811,422319..422498,423242..423415)
location: region:414155-423415:1
so has part: feature:414155-414614:1:exon
so has part: feature:416917-417088:1:exon
so has part: feature:417893-418100:1:exon
so has part: feature:418202-418353:1:exon
so has part: feature:419111-419311:1:exon
so has part: feature:419925-420193:1:exon
so has part: feature:421280-421416:1:exon
so has part: feature:421690-421811:1:exon
so has part: feature:422319-422498:1:exon
so has part: feature:423242-423415:1:exon

XP_008504287.2
type: Protein
SIO_000068: ncbiprotein

position:414155:1
position: 414155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423415:1
position: 423415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414155-414614:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:416917-417088:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:417893-418100:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:418202-418353:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:419111-419311:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:419925-420193:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:421280-421416:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:421690-421811:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:422319-422498:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:423242-423415:1:exon

DNAJC17
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: DNAJC17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 428949..441965
location: region:428949-441965:1
so has part: feature:428949-441965:1:exon
subclass of: SO_0000010

103539496
type: Gene
SIO_000068: ncbigene

position:428949:1
position: 428949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441965:1
position: 441965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428949-441965:1:exon

DNAJC17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: DNAJC17
product: DnaJ heat shock protein family (Hsp40) member C17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 long SRA read, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_008506005.2
SIO_010081: DNAJC17
subclass of: SO_0000673
so part of: DNAJC17
location: join(428949..429062,430342..430411,431251..431309,432578..432665,433045..433127,433331..433427,434397..434446,434655..434732,435378..435458,436178..436306,441754..441965)
location: region:428949-441965:1
so has part: feature:428949-429062:1:exon
so has part: feature:430342-430411:1:exon
so has part: feature:431251-431309:1:exon
so has part: feature:432578-432665:1:exon
so has part: feature:433045-433127:1:exon
so has part: feature:433331-433427:1:exon
so has part: feature:434397-434446:1:exon
so has part: feature:434655-434732:1:exon
so has part: feature:435378-435458:1:exon
so has part: feature:436178-436306:1:exon
so has part: feature:441754-441965:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:428949-429062:1:exon

position:429062:1
position: 429062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:430342-430411:1:exon

position:430342:1
position: 430342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430411:1
position: 430411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:431251-431309:1:exon

position:431251:1
position: 431251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431309:1
position: 431309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:432578-432665:1:exon

position:432578:1
position: 432578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432665:1
position: 432665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:433045-433127:1:exon

position:433045:1
position: 433045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433127:1
position: 433127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:433331-433427:1:exon

position:433331:1
position: 433331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433427:1
position: 433427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:434397-434446:1:exon

position:434397:1
position: 434397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434446:1
position: 434446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:434655-434732:1:exon

position:434655:1
position: 434655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434732:1
position: 434732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:435378-435458:1:exon

position:435378:1
position: 435378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435458:1
position: 435458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:436178-436306:1:exon

position:436178:1
position: 436178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436306:1
position: 436306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:441754-441965:1:exon

position:441754:1
position: 441754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DNAJC17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: DNAJC17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily C member 17
translation: MAVDKELLEMDLYGLLGVGEKASEKEVKKAFRQKALTCHPDKNPDKPRAAEIFHQLSQALAVLTDATARAAYDRVRRARQQAAERTQKLDEKRKKVKLDLEAREREAQTQESEEEETKITRTLEQEIIRLWEEGSRQLEEQQRLIQEQIRLEREQQIPGKQERNGAEGKVTPKLKLRWKCRKEDETRGGYSEDVLLRILQKYGEVLNLLISSRKTGSAVVEFATVKAAEMAVKNEVGLINNPLKISWLEGQPQHSPSTAPPDSTSQPRTSQGSVVSERDYESLVMMRMRQAAERQQLIQQLQREDEEESHT
SIO_010081: DNAJC17
subclass of: SO_0000673
so part of: DNAJC17
location: join(428985..429062,430342..430411,431251..431309,432578..432665,433045..433127,433331..433427,434397..434446,434655..434732,435378..435458,436178..436306,441754..441876)
location: region:428985-441876:1
so has part: feature:428985-429062:1:exon
so has part: feature:430342-430411:1:exon
so has part: feature:431251-431309:1:exon
so has part: feature:432578-432665:1:exon
so has part: feature:433045-433127:1:exon
so has part: feature:433331-433427:1:exon
so has part: feature:434397-434446:1:exon
so has part: feature:434655-434732:1:exon
so has part: feature:435378-435458:1:exon
so has part: feature:436178-436306:1:exon
so has part: feature:441754-441876:1:exon

XP_008504227.2
type: Protein
SIO_000068: ncbiprotein

position:428985:1
position: 428985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441876:1
position: 441876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428985-429062:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:430342-430411:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:431251-431309:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:432578-432665:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:433045-433127:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:433331-433427:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:434397-434446:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:434655-434732:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:435378-435458:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:436178-436306:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:441754-441876:1:exon

C5H15orf62
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: C5H15orf62
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(438386..440651)
location: region:438386-440651:-1
so has part: feature:438386-440651:-1:exon
subclass of: SO_0000010

103539495
type: Gene
SIO_000068: ncbigene

position:438386:-1
position: 438386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:440651:-1
position: 440651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438386-440651:-1:exon

C5H15orf62
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: C5H15orf62
product: chromosome 5 C15orf62 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030451088.1
SIO_010081: C5H15orf62
subclass of: SO_0000673
so part of: C5H15orf62
location: complement(join(438386..439741,440163..440651))
location: region:438386-440651:-1
so has part: feature:440163-440651:-1:exon
so has part: feature:438386-439741:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:440163-440651:-1:exon

position:440163:-1
position: 440163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:438386-439741:-1:exon

position:439741:-1
position: 439741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C5H15orf62
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: C5H15orf62
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C15orf62 homolog, mitochondrial
translation: MDTWRRGSIKSTTFFRRFSLRRHKKLGNQVILLNQNSHTLDSDGQKRECLRDLKDKSEYLSYQSEQNLAKAQAPPKPPRLYLDSSSCPNIIDHTDSHPDLSFSGAAPQYHKATQTQSQHKEQGAACGAAETPGTALPDLPDPFLSFKVDLGLSLLEDVLQTLRKQNPRDYAI
SIO_010081: C5H15orf62
subclass of: SO_0000673
so part of: C5H15orf62
location: complement(439087..439605)
location: region:439087-439605:-1
so has part: feature:439087-439605:-1:exon

XP_030306948.1
type: Protein
SIO_000068: ncbiprotein

position:439087:-1
position: 439087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439605:-1
position: 439605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439087-439605:-1:exon

GCHFR
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: GCHFR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(442202..448213)
location: region:442202-448213:-1
so has part: feature:442202-448213:-1:exon
subclass of: SO_0000010

103539556
type: Gene
SIO_000068: ncbigene

position:442202:-1
position: 442202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448213:-1
position: 448213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442202-448213:-1:exon

GCHFR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: GCHFR
product: GTP cyclohydrolase I feedback regulator
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030451089.1
SIO_010081: GCHFR
subclass of: SO_0000673
so part of: GCHFR
location: complement(join(442202..443010,445744..445838,448130..448213))
location: region:442202-448213:-1
so has part: feature:448130-448213:-1:exon
so has part: feature:445744-445838:-1:exon
so has part: feature:442202-443010:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:448130-448213:-1:exon

position:448130:-1
position: 448130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:445744-445838:-1:exon

position:445744:-1
position: 445744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445838:-1
position: 445838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:442202-443010:-1:exon

position:443010:-1
position: 443010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GCHFR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: GCHFR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTP cyclohydrolase 1 feedback regulatory protein
translation: MPYLLISTQIRMEVGPTMVGDEHSDPGLMTFLGATKRNMMGNHFWEYYVNDAPRVVLDKLESCGYRVVSMTGVGQTLVWCLHKEH
SIO_010081: GCHFR
subclass of: SO_0000673
so part of: GCHFR
location: complement(join(442884..443010,445744..445838,448130..448165))
location: region:442884-448165:-1
so has part: feature:448130-448165:-1:exon
so has part: feature:445744-445838:-1:exon
so has part: feature:442884-443010:-1:exon

XP_030306949.1
type: Protein
SIO_000068: ncbiprotein

position:442884:-1
position: 442884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448165:-1
position: 448165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448130-448165:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:445744-445838:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:442884-443010:-1:exon

RMDN3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: RMDN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 450296..467360
location: region:450296-467360:1
so has part: feature:450296-467360:1:exon
subclass of: SO_0000010

103539557
type: Gene
SIO_000068: ncbigene

position:450296:1
position: 450296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467360:1
position: 467360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450296-467360:1:exon

RMDN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RMDN3
product: regulator of microtubule dynamics 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030451513.1
SIO_010081: RMDN3
subclass of: SO_0000673
so part of: RMDN3
location: join(450296..450434,450500..450556,451048..451107,452668..452866,453490..453636,455056..455317,455813..455915,456579..456639,462061..462136,462872..462949,463083..463181,464440..464493,465695..465775,466160..467360)
location: region:450296-467360:1
so has part: feature:450296-450434:1:exon
so has part: feature:450500-450556:1:exon
so has part: feature:451048-451107:1:exon
so has part: feature:452668-452866:1:exon
so has part: feature:453490-453636:1:exon
so has part: feature:455056-455317:1:exon
so has part: feature:455813-455915:1:exon
so has part: feature:456579-456639:1:exon
so has part: feature:462061-462136:1:exon
so has part: feature:462872-462949:1:exon
so has part: feature:463083-463181:1:exon
so has part: feature:464440-464493:1:exon
so has part: feature:465695-465775:1:exon
so has part: feature:466160-467360:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:450296-450434:1:exon

position:450434:1
position: 450434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:450500-450556:1:exon

position:450500:1
position: 450500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450556:1
position: 450556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:451048-451107:1:exon

position:451048:1
position: 451048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451107:1
position: 451107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:452668-452866:1:exon

position:452668:1
position: 452668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452866:1
position: 452866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:453490-453636:1:exon

position:453490:1
position: 453490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453636:1
position: 453636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:455056-455317:1:exon

position:455056:1
position: 455056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455317:1
position: 455317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:455813-455915:1:exon

position:455813:1
position: 455813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455915:1
position: 455915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:456579-456639:1:exon

position:456579:1
position: 456579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456639:1
position: 456639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:462061-462136:1:exon

position:462061:1
position: 462061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462136:1
position: 462136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:462872-462949:1:exon

position:462872:1
position: 462872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462949:1
position: 462949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:463083-463181:1:exon

position:463083:1
position: 463083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463181:1
position: 463181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:464440-464493:1:exon

position:464440:1
position: 464440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464493:1
position: 464493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:465695-465775:1:exon

position:465695:1
position: 465695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465775:1
position: 465775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:466160-467360:1:exon

position:466160:1
position: 466160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RMDN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RMDN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of microtubule dynamics protein 3
translation: MTPPPRRGRSAGDVTAVRRRGSGSRHVSGRARAAGAGTGTGTGIEAGGGEAAGERRRRRRSGPGGGPEPSGRTEGTAEQKHPHGFVVPRVSVAAGRGDGAVQTPPLLGQEEQLDLLERLDSVLGNISQLRKEVEELRNSLQSLAAEIVEGLRSQLEESQRVAPRRRFPFPRERRDSTASSSIYFTASSGAANTDDGESEGGYTTANAESDYDREESERESEAGEDEEGCEALRDECLGLPHQEETHLPSDSSLEEGLGQLLQQADHLHHGDQQEKREGFQLLLNNKLVYADQKDFLWRLARAHSDMCDMAEDMDEKRSYASDGKEELEAALQKWDQSAECHQWYAVLCGQLSEHQSIQKRIQAAHVFKEHVDKAIELKPEDPQLYYLLGRWCYQVSHLGWLEKKTASALFETPPTATVQDALHNFLQVEELSPGFSKAGRVYIAKCYRDLGNSSAAALWMNLASELPVNTKEDAESERELEELRAAQVE
SIO_010081: RMDN3
subclass of: SO_0000673
so part of: RMDN3
location: join(450296..450434,450500..450556,451048..451107,452668..452866,453490..453636,455056..455317,455813..455915,456579..456639,462061..462136,462872..462949,463083..463181,464440..464493,465695..465775,466160..466213)
location: region:450296-466213:1
so has part: feature:450296-450434:1:exon
so has part: feature:450500-450556:1:exon
so has part: feature:451048-451107:1:exon
so has part: feature:452668-452866:1:exon
so has part: feature:453490-453636:1:exon
so has part: feature:455056-455317:1:exon
so has part: feature:455813-455915:1:exon
so has part: feature:456579-456639:1:exon
so has part: feature:462061-462136:1:exon
so has part: feature:462872-462949:1:exon
so has part: feature:463083-463181:1:exon
so has part: feature:464440-464493:1:exon
so has part: feature:465695-465775:1:exon
so has part: feature:466160-466213:1:exon

XP_030307373.1
type: Protein
SIO_000068: ncbiprotein

position:466213:1
position: 466213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450296-450434:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:450500-450556:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:451048-451107:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:452668-452866:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453490-453636:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:455056-455317:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:455813-455915:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:456579-456639:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:462061-462136:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:462872-462949:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:463083-463181:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:464440-464493:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:465695-465775:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:466160-466213:1:exon

RAD51
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: RAD51
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(469676..477020)
location: region:469676-477020:-1
so has part: feature:469676-477020:-1:exon
subclass of: SO_0000010

103539497
type: Gene
SIO_000068: ncbigene

position:469676:-1
position: 469676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477020:-1
position: 477020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469676-477020:-1:exon

RAD51
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RAD51
product: RAD51 recombinase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030451081.1
SIO_010081: RAD51
subclass of: SO_0000673
so part of: RAD51
location: complement(join(469676..470696,470979..471100,471323..471452,472168..472281,472943..473037,473936..474027,474283..474400,475145..475282,475689..475796,476947..477020))
location: region:469676-477020:-1
so has part: feature:476947-477020:-1:exon
so has part: feature:475689-475796:-1:exon
so has part: feature:475145-475282:-1:exon
so has part: feature:474283-474400:-1:exon
so has part: feature:473936-474027:-1:exon
so has part: feature:472943-473037:-1:exon
so has part: feature:472168-472281:-1:exon
so has part: feature:471323-471452:-1:exon
so has part: feature:470979-471100:-1:exon
so has part: feature:469676-470696:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:476947-477020:-1:exon

position:476947:-1
position: 476947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:475689-475796:-1:exon

position:475689:-1
position: 475689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475796:-1
position: 475796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:475145-475282:-1:exon

position:475145:-1
position: 475145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475282:-1
position: 475282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:474283-474400:-1:exon

position:474283:-1
position: 474283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474400:-1
position: 474400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:473936-474027:-1:exon

position:473936:-1
position: 473936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474027:-1
position: 474027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:472943-473037:-1:exon

position:472943:-1
position: 472943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473037:-1
position: 473037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:472168-472281:-1:exon

position:472168:-1
position: 472168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472281:-1
position: 472281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:471323-471452:-1:exon

position:471323:-1
position: 471323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471452:-1
position: 471452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:470979-471100:-1:exon

position:470979:-1
position: 470979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471100:-1
position: 471100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:469676-470696:-1:exon

position:470696:-1
position: 470696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RAD51
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RAD51
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA repair protein RAD51 homolog 1
translation: MAMQMQLEANADTSAEEESFGPQLISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELLSIKGISEAKADKILAEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGVETGSITELFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMAESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADGVGDAKD
SIO_010081: RAD51
subclass of: SO_0000673
so part of: RAD51
location: complement(join(470573..470696,470979..471100,471323..471452,472168..472281,472943..473037,473936..474027,474283..474400,475145..475282,475689..475775))
location: region:470573-475775:-1
so has part: feature:475689-475775:-1:exon
so has part: feature:475145-475282:-1:exon
so has part: feature:474283-474400:-1:exon
so has part: feature:473936-474027:-1:exon
so has part: feature:472943-473037:-1:exon
so has part: feature:472168-472281:-1:exon
so has part: feature:471323-471452:-1:exon
so has part: feature:470979-471100:-1:exon
so has part: feature:470573-470696:-1:exon

XP_030306941.1
type: Protein
SIO_000068: ncbiprotein

position:470573:-1
position: 470573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475775:-1
position: 475775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475689-475775:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:475145-475282:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:474283-474400:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:473936-474027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:472943-473037:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:472168-472281:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:471323-471452:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:470979-471100:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:470573-470696:-1:exon

KNL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: KNL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(478784..498864)
location: region:478784-498864:-1
so has part: feature:478784-498864:-1:exon
subclass of: SO_0000010

103539558
type: Gene
SIO_000068: ncbigene

position:478784:-1
position: 478784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498864:-1
position: 498864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478784-498864:-1:exon

KNL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: KNL1
product: kinetochore scaffold 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 5 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030451514.1
SIO_010081: KNL1
subclass of: SO_0000673
so part of: KNL1
location: complement(join(478784..479692,479810..479932,480924..481042,481600..481709,481847..481915,482177..482277,482611..482712,482823..482862,483228..483296,483624..483711,484289..484405,485372..485462,486261..486376,486669..486767,486864..486931,487509..487638,488213..493033,493866..493918,494290..494327,495379..495406,495864..495925,496042..496103,496497..496556,496801..496840,497231..497300,498267..498288,498544..498864))
location: region:478784-498864:-1
so has part: feature:498544-498864:-1:exon
so has part: feature:498267-498288:-1:exon
so has part: feature:497231-497300:-1:exon
so has part: feature:496801-496840:-1:exon
so has part: feature:496497-496556:-1:exon
so has part: feature:496042-496103:-1:exon
so has part: feature:495864-495925:-1:exon
so has part: feature:495379-495406:-1:exon
so has part: feature:494290-494327:-1:exon
so has part: feature:493866-493918:-1:exon
so has part: feature:488213-493033:-1:exon
so has part: feature:487509-487638:-1:exon
so has part: feature:486864-486931:-1:exon
so has part: feature:486669-486767:-1:exon
so has part: feature:486261-486376:-1:exon
so has part: feature:485372-485462:-1:exon
so has part: feature:484289-484405:-1:exon
so has part: feature:483624-483711:-1:exon
so has part: feature:483228-483296:-1:exon
so has part: feature:482823-482862:-1:exon
so has part: feature:482611-482712:-1:exon
so has part: feature:482177-482277:-1:exon
so has part: feature:481847-481915:-1:exon
so has part: feature:481600-481709:-1:exon
so has part: feature:480924-481042:-1:exon
so has part: feature:479810-479932:-1:exon
so has part: feature:478784-479692:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:498544-498864:-1:exon

position:498544:-1
position: 498544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:498267-498288:-1:exon

position:498267:-1
position: 498267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498288:-1
position: 498288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:497231-497300:-1:exon

position:497231:-1
position: 497231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:497300:-1
position: 497300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:496801-496840:-1:exon

position:496801:-1
position: 496801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:496840:-1
position: 496840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:496497-496556:-1:exon

position:496497:-1
position: 496497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:496556:-1
position: 496556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:496042-496103:-1:exon

position:496042:-1
position: 496042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:496103:-1
position: 496103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:495864-495925:-1:exon

position:495864:-1
position: 495864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:495925:-1
position: 495925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:495379-495406:-1:exon

position:495379:-1
position: 495379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:495406:-1
position: 495406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:494290-494327:-1:exon

position:494290:-1
position: 494290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:494327:-1
position: 494327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:493866-493918:-1:exon

position:493866:-1
position: 493866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:493918:-1
position: 493918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:488213-493033:-1:exon

position:488213:-1
position: 488213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:493033:-1
position: 493033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:487509-487638:-1:exon

position:487509:-1
position: 487509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487638:-1
position: 487638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:486864-486931:-1:exon

position:486864:-1
position: 486864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486931:-1
position: 486931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:486669-486767:-1:exon

position:486669:-1
position: 486669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486767:-1
position: 486767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:486261-486376:-1:exon

position:486261:-1
position: 486261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486376:-1
position: 486376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:485372-485462:-1:exon

position:485372:-1
position: 485372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485462:-1
position: 485462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:484289-484405:-1:exon

position:484289:-1
position: 484289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484405:-1
position: 484405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:483624-483711:-1:exon

position:483624:-1
position: 483624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483711:-1
position: 483711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:483228-483296:-1:exon

position:483228:-1
position: 483228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483296:-1
position: 483296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:482823-482862:-1:exon

position:482823:-1
position: 482823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482862:-1
position: 482862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:482611-482712:-1:exon

position:482611:-1
position: 482611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482712:-1
position: 482712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:482177-482277:-1:exon

position:482177:-1
position: 482177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482277:-1
position: 482277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:481847-481915:-1:exon

position:481847:-1
position: 481847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481915:-1
position: 481915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:481600-481709:-1:exon

position:481600:-1
position: 481600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481709:-1
position: 481709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:480924-481042:-1:exon

position:480924:-1
position: 480924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481042:-1
position: 481042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:479810-479932:-1:exon

position:479810:-1
position: 479810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479932:-1
position: 479932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:478784-479692:-1:exon

position:479692:-1
position: 479692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KNL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: KNL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinetochore scaffold 1
translation: MGFEPTRAEHNGLAVHRLNHSATSSRQSCLSPAYQGLHDSASASFPPRPLRDGGNRSSLRGHHRAGTQQPCEPGGCLGSLIAASAAGAGLAGRAGGEGALRRSGCGLERLPVGRGLCFIGKADPSGMDKNNPDPNMENDNTEHIRGKRLSSILKAPRQPLDDLGSGNELTQDLNTEKRRKNSRRVSFADTINCRVFPRDLKNNVSERENTGKNTRNDVFHNQNEEPEAVPCEITGMNTLLHAPIQASVQQAEWHDEDTPTARPSRQDTTLVFSEGAEMEMTASHTAVISRNLRSSQADWTEKIDITSFLAALNPTSGQPAESKEFCFQSALSCPSPEQKEEGTAVKKIDFNEFLMSLKSQEKAPNAVEGPEKENVFLVPSQVLEDMALSSVEFVYPHQQLDTCNLTKVFRAPDDGMEMTKCQVPAAGQCLGAEVTQAFVDDGMEMTASHTAKLSCPFSSAGNQSLNFRKDFPLTDNSVFRAASNQHLIVQQDPLLCTDKRSEDVGDRGDLPVLRAVTQGPRTMSAIPGSISAETVFQGDKTLVFSKCEDMEMTGNYTDVIWDESSKEVNSSHRRTCEQAVSTNSSLAENRTPAPGGKEIAEILTPSGNGAPGACKNCGFQQASGEEGTQAEGISSANVGFDSGTTPVPAAVPRSQLQLSLPDSPGVSLPGEKTVMFSGEDMELTKTSSAVRPCFLDPRSAPLSLKEEEEMEMTQCHAAVIDDQSRGGTAAAKQMPWKIIPRTNQNRGVTEGTSSLDMEKENLEVISMDGNVRRSHAGENNTKGKPLNALVSCTSDKMGMFSGDQNMDLPEAHLAAFGVAPVHNRVQEYENNHNPRGVTSKQLPGVGVTSQPAATESGDVTLSMKQQPGHPLPPNGSFIPRNEPIPSGMKGKEQRGAMLGVNAGWQNSDKQEKAHTMRVVNKGLPTRVVSEREFSSGKMVQVDSNNPASADGPHSKGAGDPLLLSTSAAHRRSSQLPLFSEKSVFFPSGENMDLTGNCTQMGLDCNSSVGLSARAAGPAHLAQDENKTRALHRGVRMARSSQELPACDVRSFTRSGFTLVPFAGEKTTLFSEDADMDITRSHTVSADNRILLQCGSGSPFTPGDRTCVFTCSGDMEITRLDPVAIEEPMARAVPQGMLSVAKRTGRKSLKGEKTVLFSLSDENDEMEMTQSHTAAIGQEIVSQDEGGPHSVPSALPVTFSSGQAARGVPKPCSAAQGTVCCGDKSQEAAEQTLLESRAPAFALDGMELTQSHQGAWEGNSLQGRHPNPSAPGTSTILFTSYQADMEITQAHSERTERGFCEEGLQLGKQAGPQAAPGNRPIIFTSAEDMEVITAQTAARHGEMAVQDREPIPAMAAADKTMVFIPSQHDMEITASHTVPVSDKGFESQQVTRESPQQPGRLSATLPPCRDEAESLHAKELGSGCHTQPREKPSTPFPLSSAALPAEKGALQVPSATPPGAICSVSPPEEIMGVGAPQDPDLPTDLSGKTQQHLLPPENLTSKRVSLKLPSVGLLDGSEESVDLVSPLPIQQPNCVVGSPDAESNQRNHLLHEGSSGREALAADSGLAGASLAPVPNKEAKEKEGLPAGGEMPPKDFQMNSEPAEQLGVGDNPSEPPDPALQPELSGILNICSKLRNIRRRSAVFPVSDPAFSDQLPKSPAQPEDTLSLGENTGAEPTHLLHPKEQEDTGLGSGAAPRDPSSGIVLKDKYQGINVPLGIFQPKLPSRRNPSVSGVQDRNTKPSDQGEAAVSEGNTNAGDSPGDNKATRQHFSPSWFVAEDFLPICLEEMDSGESVSSELLENACTEIREKQIPHNEKNQFEETKTCSSTKRALEQDEEDLQSPKKPKSDENLEGEDSQDLQETSGAVSESQGEAAGGEAAKAPACPQPSTSSSLDSGKADTGFTTQPSSQVESQLLTDSICEDNLREKLESGVITVGEFFTLLEVHVPIQKPRRSHVPVTCAASTPPAPEDLLYTRYVYRPKLCIYEEDCQALAQKIDELKP…
SIO_010081: KNL1
subclass of: SO_0000673
so part of: KNL1
location: complement(join(479587..479692,479810..479932,480924..481042,481600..481709,481847..481915,482177..482277,482611..482712,482823..482862,483228..483296,483624..483711,484289..484405,485372..485462,486261..486376,486669..486767,486864..486931,487509..487638,488213..493033,493866..493918,494290..494327,495379..495406,495864..495925,496042..496103,496497..496556,496801..496840,497231..497300,498267..498288,498544..498864))
location: region:479587-498864:-1
so has part: feature:498544-498864:-1:exon
so has part: feature:498267-498288:-1:exon
so has part: feature:497231-497300:-1:exon
so has part: feature:496801-496840:-1:exon
so has part: feature:496497-496556:-1:exon
so has part: feature:496042-496103:-1:exon
so has part: feature:495864-495925:-1:exon
so has part: feature:495379-495406:-1:exon
so has part: feature:494290-494327:-1:exon
so has part: feature:493866-493918:-1:exon
so has part: feature:488213-493033:-1:exon
so has part: feature:487509-487638:-1:exon
so has part: feature:486864-486931:-1:exon
so has part: feature:486669-486767:-1:exon
so has part: feature:486261-486376:-1:exon
so has part: feature:485372-485462:-1:exon
so has part: feature:484289-484405:-1:exon
so has part: feature:483624-483711:-1:exon
so has part: feature:483228-483296:-1:exon
so has part: feature:482823-482862:-1:exon
so has part: feature:482611-482712:-1:exon
so has part: feature:482177-482277:-1:exon
so has part: feature:481847-481915:-1:exon
so has part: feature:481600-481709:-1:exon
so has part: feature:480924-481042:-1:exon
so has part: feature:479810-479932:-1:exon
so has part: feature:479587-479692:-1:exon

XP_030307374.1
type: Protein
SIO_000068: ncbiprotein

position:479587:-1
position: 479587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498544-498864:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:498267-498288:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:497231-497300:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:496801-496840:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:496497-496556:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:496042-496103:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:495864-495925:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:495379-495406:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:494290-494327:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:493866-493918:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:488213-493033:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:487509-487638:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:486864-486931:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:486669-486767:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:486261-486376:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:485372-485462:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:484289-484405:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:483624-483711:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:483228-483296:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:482823-482862:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:482611-482712:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:482177-482277:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:481847-481915:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:481600-481709:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:480924-481042:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:479810-479932:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:479587-479692:-1:exon

RPUSD2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: RPUSD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(494299..503810)
location: region:494299-503810:-1
so has part: feature:494299-503810:-1:exon
subclass of: SO_0000010

103539559
type: Gene
SIO_000068: ncbigene

position:494299:-1
position: 494299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:503810:-1
position: 503810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494299-503810:-1:exon

RPUSD2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9244
gene: RPUSD2
product: RNA pseudouridine synthase domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003987605.1
SIO_010081: RPUSD2
so part of: RPUSD2
location: complement(join(494299..494310,500295..501758,502870..503166,503430..503810))
location: region:494299-503810:-1
so has part: feature:503430-503810:-1:exon
so has part: feature:502870-503166:-1:exon
so has part: feature:500295-501758:-1:exon
so has part: feature:494299-494310:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:503430-503810:-1:exon

position:503430:-1
position: 503430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:502870-503166:-1:exon

position:502870:-1
position: 502870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:503166:-1
position: 503166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:500295-501758:-1:exon

position:500295:-1
position: 500295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501758:-1
position: 501758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:494299-494310:-1:exon

position:494310:-1
position: 494310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRNAS-GCU
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: TRNAS-GCU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 498791..498872
location: region:498791-498872:1
so has part: feature:498791-498872:1:exon
subclass of: SO_0000663

115598417
type: Gene
SIO_000068: ncbigene

position:498791:1
position: 498791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498872:1
position: 498872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498791-498872:1:exon

TRNAS-GCU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9244
gene: TRNAS-GCU
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA serine (anticodon GCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:498824..498826,aa:Ser,seq:gct)
SIO_010081: TRNAS-GCU
subclass of: SO_0000673
so part of: TRNAS-GCU
location: 498791..498872
location: region:498791-498872:1
so has part: feature:498791-498872:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:498791-498872:1:exon

RPUSD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RPUSD2
product: RNA pseudouridine synthase domain containing 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030451070.1
SIO_010081: RPUSD2
subclass of: SO_0000673
so part of: RPUSD2
location: complement(join(500160..501176,501240..501758,502870..503166,503430..503810))
location: region:500160-503810:-1
so has part: feature:503430-503810:-1:exon
so has part: feature:502870-503166:-1:exon
so has part: feature:501240-501758:-1:exon
so has part: feature:500160-501176:-1:exon

position:500160:-1
position: 500160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:503430-503810:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:502870-503166:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:501240-501758:-1:exon

position:501240:-1
position: 501240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:500160-501176:-1:exon

position:501176:-1
position: 501176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPUSD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RPUSD2
product: RNA pseudouridine synthase domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_008506070.2
SIO_010081: RPUSD2
subclass of: SO_0000673
so part of: RPUSD2
location: complement(join(500160..501758,502870..503166,503430..503810))
location: region:500160-503810:-1
so has part: feature:503430-503810:-1:exon
so has part: feature:502870-503166:-1:exon
so has part: feature:500160-501758:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:503430-503810:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:502870-503166:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:500160-501758:-1:exon

RPUSD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RPUSD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA pseudouridylate synthase domain-containing protein 2 isoform X2
translation: MAEPQPEQGRQSPGDEKAAAPAPKKRRVSRGERYVPPPRRLSTGVSFGAEHFAETSYYFEGGLRKVRPYYFDFRTYCKGRWVGRSLLHVFTTEFRAQPLAYYRAAARAGRLRLNEEPVRDLDVILKNNDFLRNTVHRHEPPVTAQPLRILVENEEVVVVDKPSSLPVHPCGRFRHNSVIFILGKEHHLEELHTIHRLDRMTSGVLMFAKTLEVSKRMDEQVRGRQLEKEYVCRVVGEFPEHEVVCEEPILVVSYKVGVCRVDPKGKFSRTIFQRLSYNGQSSVVRCLPRTGRTHQIRVHLQFLGHPIVNDPIYNTQAWGPDRGRAGRIGKTDEELLKALVEEHRAKQSLDILGISEQDWETGTENEDCGGSKDCTESGKDEPIRESSCPAQDPEGGTRDSERGTRDPEGGTKDPERNGVAVCPLDSGSNLERLKKNQELCSGGNCEGETGGKGSEEKDPLCPECSISRRDPSPQELVMYLHALRYKGAEFEYCSQMPEWAREDWEG
SIO_010081: RPUSD2
subclass of: SO_0000673
so part of: RPUSD2
location: complement(join(500850..501176,501240..501758,502870..503166,503430..503807))
location: region:500850-503807:-1
so has part: feature:503430-503807:-1:exon
so has part: feature:502870-503166:-1:exon
so has part: feature:501240-501758:-1:exon
so has part: feature:500850-501176:-1:exon

XP_030306930.1
type: Protein
SIO_000068: ncbiprotein

position:500850:-1
position: 500850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:503807:-1
position: 503807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:503430-503807:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:502870-503166:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:501240-501758:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:500850-501176:-1:exon

RPUSD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RPUSD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA pseudouridylate synthase domain-containing protein 2 isoform X1
translation: MAEPQPEQGRQSPGDEKAAAPAPKKRRVSRGERYVPPPRRLSTGVSFGAEHFAETSYYFEGGLRKVRPYYFDFRTYCKGRWVGRSLLHVFTTEFRAQPLAYYRAAARAGRLRLNEEPVRDLDVILKNNDFLRNTVHRHEPPVTAQPLRILVENEEVVVVDKPSSLPVHPCGRFRHNSVIFILGKEHHLEELHTIHRLDRMTSGVLMFAKTLEVSKRMDEQVRGRQLEKEYVCRVVGEFPEHEVVCEEPILVVSYKVGVCRVDPKGKFSRTIFQRLSYNGQSSVVRCLPRTGRTHQIRVHLQFLGHPIVNDPIYNTQAWGPDRGRAGRIGKTDEELLKALVEEHRAKQSLDILGISEQDWETGTENEDCGGSKDCTESGKDEPIRESSCPAQDPEGGTRDPEGGTRDPEGGTRDPEGGTKDSERGTRDPEGGTKDPERNGVAVCPLDSGSNLERLKKNQELCSGGNCEGETGGKGSEEKDPLCPECSISRRDPSPQELVMYLHALRYKGAEFEYCSQMPEWAREDWEG
SIO_010081: RPUSD2
subclass of: SO_0000673
so part of: RPUSD2
location: complement(join(500850..501758,502870..503166,503430..503807))
location: region:500850-503807:-1
so has part: feature:503430-503807:-1:exon
so has part: feature:502870-503166:-1:exon
so has part: feature:500850-501758:-1:exon

XP_008504292.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:503430-503807:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:502870-503166:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:500850-501758:-1:exon

LOC103539560
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103539560
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(505574..509389)
location: region:505574-509389:-1
so has part: feature:505574-509389:-1:exon
subclass of: SO_0000010

103539560
type: Gene
SIO_000068: ncbigene

position:505574:-1
position: 505574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509389:-1
position: 509389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505574-509389:-1:exon

LOC103539560
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103539560
product: protein-L-isoaspartate(D-aspartate) O-methyltransferase
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030451515.1
SIO_010081: LOC103539560
subclass of: SO_0000673
so part of: LOC103539560
location: complement(join(505574..505960,506252..506421,507179..507264,507379..507396,507494..507599,508386..508527,509314..509389))
location: region:505574-509389:-1
so has part: feature:509314-509389:-1:exon
so has part: feature:508386-508527:-1:exon
so has part: feature:507494-507599:-1:exon
so has part: feature:507379-507396:-1:exon
so has part: feature:507179-507264:-1:exon
so has part: feature:506252-506421:-1:exon
so has part: feature:505574-505960:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:509314-509389:-1:exon

position:509314:-1
position: 509314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:508386-508527:-1:exon

position:508386:-1
position: 508386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508527:-1
position: 508527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:507494-507599:-1:exon

position:507494:-1
position: 507494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507599:-1
position: 507599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:507379-507396:-1:exon

position:507379:-1
position: 507379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507396:-1
position: 507396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:507179-507264:-1:exon

position:507179:-1
position: 507179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507264:-1
position: 507264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:506252-506421:-1:exon

position:506252:-1
position: 506252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:506421:-1
position: 506421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:505574-505960:-1:exon

position:505960:-1
position: 505960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103539560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103539560
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein-L-isoaspartate(D-aspartate) O-methyltransferase
translation: MGTWGQRGQGTPGKGQQGSGRLRASCVCLRGMTCLLPCTLLPLMGLLFARTMAWTSSGKTHPELINNLYSEKGIIKSQRVFEVLLATDRGHYIKYFPYMDSPQSIGYKATIMGDGRQGYPEEAPYDAIHVGAAAPTVPKELLEELKPGGRLILPLGAEGGSQVLMQYDKGSDGQVTATQLMGVIFVPLTDKEKQWPGDEL
SIO_010081: LOC103539560
subclass of: SO_0000673
so part of: LOC103539560
location: complement(join(505948..505960,506252..506421,507179..507264,507379..507396,507494..507599,508386..508527,509314..509383))
location: region:505948-509383:-1
so has part: feature:509314-509383:-1:exon
so has part: feature:508386-508527:-1:exon
so has part: feature:507494-507599:-1:exon
so has part: feature:507379-507396:-1:exon
so has part: feature:507179-507264:-1:exon
so has part: feature:506252-506421:-1:exon
so has part: feature:505948-505960:-1:exon

XP_030307375.1
type: Protein
SIO_000068: ncbiprotein

position:505948:-1
position: 505948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509383:-1
position: 509383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509314-509383:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:508386-508527:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:507494-507599:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:507379-507396:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:507179-507264:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:506252-506421:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:505948-505960:-1:exon

CCDC32
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: CCDC32
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 509570..515005
location: region:509570-515005:1
so has part: feature:509570-515005:1:exon
subclass of: SO_0000010

103539498
type: Gene
SIO_000068: ncbigene

position:509570:1
position: 509570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515005:1
position: 515005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509570-515005:1:exon

CCDC32
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CCDC32
product: coiled-coil domain containing 32
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_030451086.1
SIO_010081: CCDC32
subclass of: SO_0000673
so part of: CCDC32
location: join(509570..509644,509964..510213,511615..511771,513423..515005)
location: region:509570-515005:1
so has part: feature:509570-509644:1:exon
so has part: feature:509964-510213:1:exon
so has part: feature:511615-511771:1:exon
so has part: feature:513423-515005:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:509570-509644:1:exon

position:509644:1
position: 509644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:509964-510213:1:exon

position:509964:1
position: 509964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510213:1
position: 510213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:511615-511771:1:exon

position:511615:1
position: 511615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511771:1
position: 511771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:513423-515005:1:exon

position:513423:1
position: 513423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CCDC32
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CCDC32
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 32
translation: MRMIESVDSAVTRPSEDLWAEICSCLPHPEQRDSAETFTDSFLDSYTEGGGPGPGSGSSAQPPLKPWAPLKDSEVYLASLERRLLRIKGLSQEVTSKEMLHTLSQAKKECWDRFLQEKFESEVFLEGQDSDESTLEHLKRWLQPDKVAINTEEVQCLIPPELEKQEAEEEPPAAEQ
SIO_010081: CCDC32
subclass of: SO_0000673
so part of: CCDC32
location: join(509973..510213,511615..511771,513423..513555)
location: region:509973-513555:1
so has part: feature:509973-510213:1:exon
so has part: feature:511615-511771:1:exon
so has part: feature:513423-513555:1:exon

XP_030306946.1
type: Protein
SIO_000068: ncbiprotein

position:509973:1
position: 509973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513555:1
position: 513555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509973-510213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511615-511771:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:513423-513555:1:exon

LOC103539561
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103539561
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 520095..521177
location: region:520095-521177:1
so has part: feature:520095-521177:1:exon
subclass of: SO_0000010

103539561
type: Gene
SIO_000068: ncbigene

position:520095:1
position: 520095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521177:1
position: 521177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520095-521177:1:exon

LOC103539561
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103539561
product: prolactin-releasing peptide receptor-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_008506072.2
SIO_010081: LOC103539561
subclass of: SO_0000673
so part of: LOC103539561
location: 520095..521177
location: region:520095-521177:1
so has part: feature:520095-521177:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:520095-521177:1:exon

LOC103539561
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103539561
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prolactin-releasing peptide receptor-like
translation: MAHQLLPNSSWQNISAPHFTGLDLLLELKPLFIPLYATLVAVACVGNLFLILLIALTKKLHCTTNFLIGNLAAADFTMCLVCVPLTASYAFEARGWLFGTFLCHLVTLMQATTVFVSVLSLSAIAVDRYVVVAHPIRRRLGPRACVCLVLGIWLLSLLASLPTCLHTHYLDLNAVGHDMIVCEEFWPREERARLLYSCLMLLLSYLLPLLAVSGSFCAITYRLRRRNVPGAAHPCQDKWTRSKQKTFRVLAISVLCFAVCWLPLQVVNFIRDLDEEFAILDKRYINVIQVCCHLMAMSSACYNPFIYASLHDKFWSQLSGCFSRRKKRSSGRASRLNTCSILADAPTGLSDRIALQTRFC
SIO_010081: LOC103539561
subclass of: SO_0000673
so part of: LOC103539561
location: 520095..521177
location: region:520095-521177:1
so has part: feature:520095-521177:1:exon

XP_008504294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:520095-521177:1:exon

CHST14
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: CHST14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(530098..531673)
location: region:530098-531673:-1
so has part: feature:530098-531673:-1:exon
subclass of: SO_0000010

103539562
type: Gene
SIO_000068: ncbigene

position:530098:-1
position: 530098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531673:-1
position: 531673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:530098-531673:-1:exon

CHST14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CHST14
product: carbohydrate sulfotransferase 14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030451080.1
SIO_010081: CHST14
subclass of: SO_0000673
so part of: CHST14
location: complement(530098..531673)
location: region:530098-531673:-1
so has part: feature:530098-531673:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:530098-531673:-1:exon

CHST14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CHST14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 14
translation: MLPRPPFPGEVKRAAASGRSRSRARGAGGGTVLLPSMLMFGVILASSGLLLMIEKGILAEVKPLPLHPPAGELSRRGGGGGGGGEEVPGDLDSEVLRDIRNRTIRAVCGQRAMPRSVWELPAGQRRTVLRHLLVSDKYRFLYCYVPKVACSNWKRILKVLGGALESVDVKLKMDHKSDLVFLGDMKPDEISYRLKNYYKFIFVRNPMERLLSAYRNKFGEIKEYQQKYGVEIVRRYRKNGGNSAGDDVTFSEFLRYLLDEEVERMNEHWMPIYNLCQPCAVRYDFIGSYERLDADARRVLERIRSPSGIRFPERQAWYNPVTPETLQYYLCNTQRWLIQELLPKYILDFSLFAYPLPNVTTEFCRQ
SIO_010081: CHST14
subclass of: SO_0000673
so part of: CHST14
location: complement(530469..531569)
location: region:530469-531569:-1
so has part: feature:530469-531569:-1:exon

XP_030306940.1
type: Protein
SIO_000068: ncbiprotein

position:530469:-1
position: 530469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531569:-1
position: 531569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:530469-531569:-1:exon

BAHD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: BAHD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(539231..571838)
location: region:539231-571838:-1
so has part: feature:539231-571838:-1:exon
subclass of: SO_0000010

103539499
type: Gene
SIO_000068: ncbigene

position:539231:-1
position: 539231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:571838:-1
position: 571838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:539231-571838:-1:exon

BAHD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: BAHD1
product: bromo adjacent homology domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_030451047.1
SIO_010081: BAHD1
subclass of: SO_0000673
so part of: BAHD1
location: complement(join(539231..539650,540261..540352,542429..542505,543417..543576,545514..545875,547834..549477,571675..571838))
location: region:539231-571838:-1
so has part: feature:571675-571838:-1:exon
so has part: feature:547834-549477:-1:exon
so has part: feature:545514-545875:-1:exon
so has part: feature:543417-543576:-1:exon
so has part: feature:542429-542505:-1:exon
so has part: feature:540261-540352:-1:exon
so has part: feature:539231-539650:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:571675-571838:-1:exon

position:571675:-1
position: 571675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:547834-549477:-1:exon

position:547834:-1
position: 547834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549477:-1
position: 549477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:545514-545875:-1:exon

position:545514:-1
position: 545514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545875:-1
position: 545875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:543417-543576:-1:exon

position:543417:-1
position: 543417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543576:-1
position: 543576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:542429-542505:-1:exon

position:542429:-1
position: 542429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542505:-1
position: 542505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:540261-540352:-1:exon

position:540261:-1
position: 540261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540352:-1
position: 540352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:539231-539650:-1:exon

position:539650:-1
position: 539650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BAHD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: BAHD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromo adjacent homology domain-containing 1 protein
translation: MTHARKKQLFLLKHPAGSAGRASSPTGSRRMDRTDTQCGRQRGGDAPQAPKCPGGFVGSNKPKNLHEVRKTYPLRRRLLPSVNKKTCKVLLTRLEDVAGSLSKQSQSCKKKDLPSWMGGLGPALFSEQAQGAGKSDGSGEKHPGNGPGAEQEPGAVPSEPRKRRVASLNAEAVNNLLFERDEGLLAGRRCRRDSGKGGGDCALKNLHCKAGDSWPLLEKTAVKTGKGKSRQHEPGQKCNSCDHSLDEVFDDGAKREEGAISYHPTPKRLASLNAVAFLKLTHEKEQPLKQRSKSDGEGKSENPCSKSVLKWAKASRKNCVKSKKETAGLKMEGQQGWRGLPLGAVGKGEQQDSSRLYGPAEPIPYESLSSSYASTQGFYHRLPLLMGGQASMKPEYGRPGEKSPTPKQEFHQPSFPVQQFPPLPVPGNHTDCGCLYESSDLTPLNGFYVYYGQSGYSGYTHCSLYPKDELSQSATCQGLLVSPGSLPSGAHFQPLHWCNSPYCCGEGTAISSYSVCGVVPEGRVSSLHAGRNTHPYKMPFAAEGCKSLDQLNLTIPVAGHPASPAHPLSGCPVPSVPPAAEPVPHLQTPNSDPQTMARECPQSSKPPSGSKSGLRNTPGCLHASDSKATGGHSHPKQQRISRRRATNGWIPVGTASEKAVYVVNEPEPAVRKSYQAVERDGEIIRVRDTVLLKSGPRKKSMPYVAKISALWEDPKTGELMMSLLWYYRPEHTQGGRNPSMHQNEIFASRHQDENSVACIEEKCYVLTFAEYCRFCALAKRRVEGIPGRKTILVPPSEEYSTPLHRKVPEDTDPELVFLCRHVYDFRHGRILKNPQ
SIO_010081: BAHD1
subclass of: SO_0000673
so part of: BAHD1
location: complement(join(539461..539650,540261..540352,542429..542505,543417..543576,545514..545875,547834..549460))
location: region:539461-549460:-1
so has part: feature:547834-549460:-1:exon
so has part: feature:545514-545875:-1:exon
so has part: feature:543417-543576:-1:exon
so has part: feature:542429-542505:-1:exon
so has part: feature:540261-540352:-1:exon
so has part: feature:539461-539650:-1:exon

XP_030306907.1
type: Protein
SIO_000068: ncbiprotein

position:539461:-1
position: 539461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549460:-1
position: 549460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547834-549460:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:545514-545875:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:543417-543576:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:542429-542505:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:540261-540352:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:539461-539650:-1:exon

IVD
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: IVD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(586148..601218)
location: region:586148-601218:-1
so has part: feature:586148-601218:-1:exon
subclass of: SO_0000010

103539563
type: Gene
SIO_000068: ncbigene

position:586148:-1
position: 586148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601218:-1
position: 601218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:586148-601218:-1:exon

IVD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: IVD
product: isovaleryl-CoA dehydrogenase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 1 long SRA read, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_030451077.1
SIO_010081: IVD
subclass of: SO_0000673
so part of: IVD
location: complement(join(586148..587400,587492..587564,588282..588386,588861..588942,589837..589930,592800..592896,593251..593387,593840..593933,595301..595470,597445..597496,598492..598581,601070..601218))
location: region:586148-601218:-1
so has part: feature:601070-601218:-1:exon
so has part: feature:598492-598581:-1:exon
so has part: feature:597445-597496:-1:exon
so has part: feature:595301-595470:-1:exon
so has part: feature:593840-593933:-1:exon
so has part: feature:593251-593387:-1:exon
so has part: feature:592800-592896:-1:exon
so has part: feature:589837-589930:-1:exon
so has part: feature:588861-588942:-1:exon
so has part: feature:588282-588386:-1:exon
so has part: feature:587492-587564:-1:exon
so has part: feature:586148-587400:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:601070-601218:-1:exon

position:601070:-1
position: 601070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:598492-598581:-1:exon

position:598492:-1
position: 598492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598581:-1
position: 598581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:597445-597496:-1:exon

position:597445:-1
position: 597445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597496:-1
position: 597496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:595301-595470:-1:exon

position:595301:-1
position: 595301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:595470:-1
position: 595470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:593840-593933:-1:exon

position:593840:-1
position: 593840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593933:-1
position: 593933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:593251-593387:-1:exon

position:593251:-1
position: 593251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593387:-1
position: 593387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:592800-592896:-1:exon

position:592800:-1
position: 592800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592896:-1
position: 592896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:589837-589930:-1:exon

position:589837:-1
position: 589837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589930:-1
position: 589930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:588861-588942:-1:exon

position:588861:-1
position: 588861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588942:-1
position: 588942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:588282-588386:-1:exon

position:588282:-1
position: 588282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588386:-1
position: 588386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:587492-587564:-1:exon

position:587492:-1
position: 587492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587564:-1
position: 587564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:586148-587400:-1:exon

position:587400:-1
position: 587400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IVD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: IVD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: isovaleryl-CoA dehydrogenase, mitochondrial
translation: MAVAIGRAAVGAGLRRRRLELVRRGCAGLAVDDTVNGLSEEQRQLRQTMTKFCQEHLAPKAQQIDQENEFKDMRAFWKKLGELGVLGITAPVEYGGSALGYLDHVLVMEEISRASGAVGLSYGAHSNLCINQLVRNGSEAQKSKYLPKLISGEHIGALAMSEPNAGSDVVSMKLKADKKGDFFVLNGNKFWITNGPDADVLIVYAKTDMNAVPASRGITAFIVERGMPGFSTAQKLDKLGMRGSNTCELIFENCKIPAENVLGTLSKGVYVLMSGLDLERLVLSGGPLGLMQAVLDHAIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDQGHFNAKDCAGVILYSAECATQVALDGIQCLGGNGYINEYPMGRLLRDAKLYEIGAGTSEVRRLVIGRAFNATFQ
SIO_010081: IVD
subclass of: SO_0000673
so part of: IVD
location: complement(join(587267..587400,587492..587564,588282..588386,588861..588942,589837..589930,592800..592896,593251..593387,593840..593933,595301..595470,597445..597496,598492..598581,601070..601201))
location: region:587267-601201:-1
so has part: feature:601070-601201:-1:exon
so has part: feature:598492-598581:-1:exon
so has part: feature:597445-597496:-1:exon
so has part: feature:595301-595470:-1:exon
so has part: feature:593840-593933:-1:exon
so has part: feature:593251-593387:-1:exon
so has part: feature:592800-592896:-1:exon
so has part: feature:589837-589930:-1:exon
so has part: feature:588861-588942:-1:exon
so has part: feature:588282-588386:-1:exon
so has part: feature:587492-587564:-1:exon
so has part: feature:587267-587400:-1:exon

XP_030306937.1
type: Protein
SIO_000068: ncbiprotein

position:587267:-1
position: 587267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601201:-1
position: 601201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:601070-601201:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:598492-598581:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:597445-597496:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:595301-595470:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:593840-593933:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:593251-593387:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:592800-592896:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:589837-589930:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:588861-588942:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:588282-588386:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:587492-587564:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:587267-587400:-1:exon

KNSTRN
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: KNSTRN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(601296..607053)
location: region:601296-607053:-1
so has part: feature:601296-607053:-1:exon
subclass of: SO_0000010

103539564
type: Gene
SIO_000068: ncbigene

position:601296:-1
position: 601296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607053:-1
position: 607053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:601296-607053:-1:exon

KNSTRN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: KNSTRN
product: kinetochore localized astrin (SPAG5) binding protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030451083.1
SIO_010081: KNSTRN
subclass of: SO_0000673
so part of: KNSTRN
location: complement(join(601296..601725,602916..602990,603123..603184,604160..604274,605249..605348,605569..605625,605774..605906,606932..607053))
location: region:601296-607053:-1
so has part: feature:606932-607053:-1:exon
so has part: feature:605774-605906:-1:exon
so has part: feature:605569-605625:-1:exon
so has part: feature:605249-605348:-1:exon
so has part: feature:604160-604274:-1:exon
so has part: feature:603123-603184:-1:exon
so has part: feature:602916-602990:-1:exon
so has part: feature:601296-601725:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:606932-607053:-1:exon

position:606932:-1
position: 606932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:605774-605906:-1:exon

position:605774:-1
position: 605774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605906:-1
position: 605906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:605569-605625:-1:exon

position:605569:-1
position: 605569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605625:-1
position: 605625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:605249-605348:-1:exon

position:605249:-1
position: 605249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605348:-1
position: 605348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:604160-604274:-1:exon

position:604160:-1
position: 604160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604274:-1
position: 604274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:603123-603184:-1:exon

position:603123:-1
position: 603123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603184:-1
position: 603184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:602916-602990:-1:exon

position:602916:-1
position: 602916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602990:-1
position: 602990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:601296-601725:-1:exon

position:601725:-1
position: 601725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KNSTRN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: KNSTRN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small kinetochore-associated protein
translation: MRGAVTVGGVCVRIAGAMGEEGSRIPLCTALHRPPPHTEMQVAFPSKKQCVNKAADLELNKDPNFNFSSQIPADGVFKATNQGLPKSTKKVEPVAKKAAIRGPHNRYKVEAELKAKNQLLETAKQQLHSRLTAAQGTIKELKEENEGLVQEVEKLKKFQETCMVILESRNIDPVTGSSIVEEEEKTRECQEQTRLLTEKLIQELRVFNQTAAKEKEELQAAMAKWKSAEEERQQSLEKHCSFQAEIKECSAVLDELKLLLAM
SIO_010081: KNSTRN
subclass of: SO_0000673
so part of: KNSTRN
location: complement(join(601594..601725,602916..602990,603123..603184,604160..604274,605249..605348,605569..605625,605774..605906,606932..607046))
location: region:601594-607046:-1
so has part: feature:606932-607046:-1:exon
so has part: feature:605774-605906:-1:exon
so has part: feature:605569-605625:-1:exon
so has part: feature:605249-605348:-1:exon
so has part: feature:604160-604274:-1:exon
so has part: feature:603123-603184:-1:exon
so has part: feature:602916-602990:-1:exon
so has part: feature:601594-601725:-1:exon

XP_030306943.1
type: Protein
SIO_000068: ncbiprotein

position:601594:-1
position: 601594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607046:-1
position: 607046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:606932-607046:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:605774-605906:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:605569-605625:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:605249-605348:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:604160-604274:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:603123-603184:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:602916-602990:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:601594-601725:-1:exon

DISP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: DISP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(608808..619029)
location: region:608808-619029:-1
so has part: feature:608808-619029:-1:exon
subclass of: SO_0000010

103539500
type: Gene
SIO_000068: ncbigene

position:608808:-1
position: 608808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619029:-1
position: 619029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:608808-619029:-1:exon

DISP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: DISP2
product: dispatched RND transporter family member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_008506009.2
SIO_010081: DISP2
subclass of: SO_0000673
so part of: DISP2
location: complement(join(608808..612215,612868..612965,613731..613849,614283..614398,614990..615113,616648..616677,617984..618518,618981..619029))
location: region:608808-619029:-1
so has part: feature:618981-619029:-1:exon
so has part: feature:617984-618518:-1:exon
so has part: feature:616648-616677:-1:exon
so has part: feature:614990-615113:-1:exon
so has part: feature:614283-614398:-1:exon
so has part: feature:613731-613849:-1:exon
so has part: feature:612868-612965:-1:exon
so has part: feature:608808-612215:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:618981-619029:-1:exon

position:618981:-1
position: 618981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:617984-618518:-1:exon

position:617984:-1
position: 617984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618518:-1
position: 618518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:616648-616677:-1:exon

position:616648:-1
position: 616648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616677:-1
position: 616677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:614990-615113:-1:exon

position:614990:-1
position: 614990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615113:-1
position: 615113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:614283-614398:-1:exon

position:614283:-1
position: 614283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614398:-1
position: 614398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:613731-613849:-1:exon

position:613731:-1
position: 613731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:613849:-1
position: 613849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:612868-612965:-1:exon

position:612868:-1
position: 612868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612965:-1
position: 612965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:608808-612215:-1:exon

position:612215:-1
position: 612215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DISP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: DISP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein dispatched homolog 2
translation: MILRSPLESLQVTEALGESPAGRVVLPLQNTATALLLHHRFLSSHREHQPAGPCQTCLATPEMGNTEPSYRGTSWDRICPVHHYPIPASPRLGAEPLPSSSHTPGAVPPQSNGQVPASSQDSQHHHLYFPCEQQEPRGSYALPPLPGHGERPLLCSHLSSTDPVPASHHEVPETPWKQWSPGERRPEQRHVVTVRHDKAFRMPKSYSQMLAEWPMAVLVLCSVTALVCTLAGLLVGNLPDFSEPLMGFEPRDTDIGRKLVVWRNVESHTGYRKTFSLSPYTEKKSYGDIGIGRGQKAAEGEQEARTQRRMEHIYGADGFFCGPPEKSYSQLVFMSTTAGSLWNLQAIQSMCQIEQDKIRSHVHFQELCQRTETNECCPSWSLGNYIAVLYNRSSCLEITQADISHTLALLRACAPDYHKGILTPSCIGPEAGREKHSQCAQVPEKCTHFNAIYQLLHFLVDRDFLSPQTMEYQVPSLKYSLLFLPTRKGASMMGIYLDNLESWDLFDNYTSITGMDLGLKQKLFQHYLLLDTKYPVLAILAIFLSISFYLRSIFITLMVLLAVVSSLMISYFLYKVAFRFTYFPFVNLTAVLILSSICANHTFVFFDLWNLSKSQHPSAGLSQWVSQTMHHFAYLMLASCFTTGAAFYASYISNITAIRCFAVYMGTSVLVSLLFMVTWLPSAAVLYERYVATTCVYRPENYWNKSGHKRVSLSLHYILRGLQNTLSETSKLLFEKLLPCGVIKFRYIWICWFAALAIGGAYISCSNPKLKLPTLETSSVQVFRLSHPFERYDSEYCHQFMFQRQERGEGQRMPVTIVWGVLPVDNGDHFDPKSNGTLVTDVTFTIQNPEAQKWLLEFCQKVKNETFYYPDAEQKSTVCFMEEFLRWMESRQCSQGDHSFNLCCNQFSFPYGGEVFLHCIKMMLLEQGREGETYDLGLRFDGEGNLAALVLQFQTIYHYSFNYSKAKQFYEEIDLWVTEEMKTAPVGLQNGWFTSKLELYNLQHSLNTEMMVVMGLSIAISFVVLLLTTWNVLLSVFSVTAIAGTVLVTIGLLVLLEWQLNAVESLFISAAVGLSVDFTVNYCISYHLCPHSDRLSRVAFSLKQMSCATAMASSALFSAGVIMLPATVLAYRKLGIFIVMIKCISCGFASFFFQSLCCFFGPEKNCGQILWPCVHTMKDYPDDSGLNSSFACGGSEKQSQLRKVQESNTANEQYELQPLSRKLSDSFDNSTSTSKLSNRLSEDTQVEDNRCPRIGTHSSLERGRQNLQEALGDQQAGLCQCPALQTSSPYKHSSSGVEIHRERLCRECRCRKYGPKAWDGSGLDNIQPAGTKEEGQLSKSQCSSDTAQQQVDYTSDNSHLPAADIYKIHRCLCSLGSSFDMLNISSETSISDFEQGLKLAESASSCPDVLELSDSYSQTERGYLNGKRDTLRLDLRETVFDISPAASQQNSSSWKNRFGLGSEGPVVLPNSQPDMPDVWIKRSSAQSSAYNS
SIO_010081: DISP2
subclass of: SO_0000673
so part of: DISP2
location: complement(join(608808..612215,612868..612965,613731..613849,614283..614398,614990..615113,616648..616677,617984..618518,618981..619029))
location: region:608808-619029:-1
so has part: feature:618981-619029:-1:exon
so has part: feature:617984-618518:-1:exon
so has part: feature:616648-616677:-1:exon
so has part: feature:614990-615113:-1:exon
so has part: feature:614283-614398:-1:exon
so has part: feature:613731-613849:-1:exon
so has part: feature:612868-612965:-1:exon
so has part: feature:608808-612215:-1:exon

XP_008504231.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:618981-619029:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:617984-618518:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:616648-616677:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:614990-615113:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:614283-614398:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:613731-613849:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:612868-612965:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:608808-612215:-1:exon

CCDC9B
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: CCDC9B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 632133..665897
location: region:632133-665897:1
so has part: feature:632133-665897:1:exon
subclass of: SO_0000010

103539565
type: Gene
SIO_000068: ncbigene

position:632133:1
position: 632133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:665897:1
position: 665897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:632133-665897:1:exon

CCDC9B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CCDC9B
product: coiled-coil domain containing 9B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030451066.1
SIO_010081: CCDC9B
subclass of: SO_0000673
so part of: CCDC9B
location: join(632133..632303,637373..637486,638567..638671,639100..639162,639556..639720,643412..643561,651282..651356,653657..653841,655117..655178,655690..655743,656150..656252,659102..659159,659470..660281,663663..665897)
location: region:632133-665897:1
so has part: feature:632133-632303:1:exon
so has part: feature:637373-637486:1:exon
so has part: feature:638567-638671:1:exon
so has part: feature:639100-639162:1:exon
so has part: feature:639556-639720:1:exon
so has part: feature:643412-643561:1:exon
so has part: feature:651282-651356:1:exon
so has part: feature:653657-653841:1:exon
so has part: feature:655117-655178:1:exon
so has part: feature:655690-655743:1:exon
so has part: feature:656150-656252:1:exon
so has part: feature:659102-659159:1:exon
so has part: feature:659470-660281:1:exon
so has part: feature:663663-665897:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:632133-632303:1:exon

position:632303:1
position: 632303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:637373-637486:1:exon

position:637373:1
position: 637373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:637486:1
position: 637486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:638567-638671:1:exon

position:638567:1
position: 638567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638671:1
position: 638671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:639100-639162:1:exon

position:639100:1
position: 639100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639162:1
position: 639162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:639556-639720:1:exon

position:639556:1
position: 639556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639720:1
position: 639720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:643412-643561:1:exon

position:643412:1
position: 643412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643561:1
position: 643561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:651282-651356:1:exon

position:651282:1
position: 651282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651356:1
position: 651356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:653657-653841:1:exon

position:653657:1
position: 653657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:653841:1
position: 653841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:655117-655178:1:exon

position:655117:1
position: 655117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:655178:1
position: 655178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:655690-655743:1:exon

position:655690:1
position: 655690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:655743:1
position: 655743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:656150-656252:1:exon

position:656150:1
position: 656150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:656252:1
position: 656252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:659102-659159:1:exon

position:659102:1
position: 659102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659159:1
position: 659159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:659470-660281:1:exon

position:659470:1
position: 659470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660281:1
position: 660281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:663663-665897:1:exon

position:663663:1
position: 663663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CCDC9B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CCDC9B
product: coiled-coil domain containing 9B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030451067.1
SIO_010081: CCDC9B
subclass of: SO_0000673
so part of: CCDC9B
location: join(632133..632303,637373..637486,638567..638671,639556..639720,643412..643561,651282..651356,653657..653841,655117..655178,655690..655743,656150..656252,659102..659159,659470..660281,663663..665897)
location: region:632133-665897:1
so has part: feature:632133-632303:1:exon
so has part: feature:637373-637486:1:exon
so has part: feature:638567-638671:1:exon
so has part: feature:639556-639720:1:exon
so has part: feature:643412-643561:1:exon
so has part: feature:651282-651356:1:exon
so has part: feature:653657-653841:1:exon
so has part: feature:655117-655178:1:exon
so has part: feature:655690-655743:1:exon
so has part: feature:656150-656252:1:exon
so has part: feature:659102-659159:1:exon
so has part: feature:659470-660281:1:exon
so has part: feature:663663-665897:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:632133-632303:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:637373-637486:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:638567-638671:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:639556-639720:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:643412-643561:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:651282-651356:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:653657-653841:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:655117-655178:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:655690-655743:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:656150-656252:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:659102-659159:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:659470-660281:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:663663-665897:1:exon

CCDC9B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CCDC9B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 9B isoform X1
translation: MSNMHRAEAAVDDAMLRKKEQKDVELDKKILALRKKNEALIRRYQEIEEDKKRAEQEGMAVTSRRPKHDGLTITITKAHNDLKDAITQTEHYGEDSPSLSMDKRVVSEKWVSPCPPSSGYTIGSEEEEEEEEADHMFTFRMGKRMQLAVTMDNKGKGKRIVSEKRGECFPAPGRVPELGEEETDHLVAFRRGRRMQIAITMDNKDKAEERRAAEKRRSESDKGPDSEHSRKDGGKAAQKGPGDPSVPMSGRERWEYIRWKREREQIDLERLARHKNARGEWRRAWDVEKSEHMFEEDFVKDGEPALDNPSNKKGGRNARKFQQRNFPPDGRGAQHAVNVSDPGLKAVPAVSSRAKGKDRLTGRARRWDAKEGEELCFLKDDVEGQRNLGMDKQKSRGEEGVEENCTAELEEKVKQPSPQDHGASSSQRLPSGKVQAAHNSQKEEQGGVKGSSMEVAVASTGDPEPGPKTSVESVGEGAHGKPGTAAISQEEGSTPSTASNLPSTVPASRHSSEEPLSLPMGENASGAGSDQNTAPEQESREGSSNSPGGKLDTAVGDRLDAGQGQLVTKPGEEVTQDTALQGQTLALKGGEDAEGTEHRGEPLPPGKANPDKTVVSEQDTAQAQPREGEQPEDLKDKDSGDTLN
SIO_010081: CCDC9B
subclass of: SO_0000673
so part of: CCDC9B
location: join(632283..632303,637373..637486,638567..638671,639100..639162,639556..639720,643412..643561,651282..651356,653657..653841,655117..655178,655690..655743,656150..656252,659102..659159,659470..660249)
location: region:632283-660249:1
so has part: feature:632283-632303:1:exon
so has part: feature:637373-637486:1:exon
so has part: feature:638567-638671:1:exon
so has part: feature:639100-639162:1:exon
so has part: feature:639556-639720:1:exon
so has part: feature:643412-643561:1:exon
so has part: feature:651282-651356:1:exon
so has part: feature:653657-653841:1:exon
so has part: feature:655117-655178:1:exon
so has part: feature:655690-655743:1:exon
so has part: feature:656150-656252:1:exon
so has part: feature:659102-659159:1:exon
so has part: feature:659470-660249:1:exon

XP_030306926.1
type: Protein
SIO_000068: ncbiprotein

position:632283:1
position: 632283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660249:1
position: 660249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:632283-632303:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:637373-637486:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:638567-638671:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:639100-639162:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:639556-639720:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:643412-643561:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:651282-651356:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:653657-653841:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:655117-655178:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:655690-655743:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:656150-656252:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:659102-659159:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:659470-660249:1:exon

CCDC9B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CCDC9B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 9B isoform X2
translation: MSNMHRAEAAVDDAMLRKKEQKDVELDKKILALRKKNEALIRRYQEIEEDKKRAEQEGMAVTSRRPKHDGLTITITKAHNDKRVVSEKWVSPCPPSSGYTIGSEEEEEEEEADHMFTFRMGKRMQLAVTMDNKGKGKRIVSEKRGECFPAPGRVPELGEEETDHLVAFRRGRRMQIAITMDNKDKAEERRAAEKRRSESDKGPDSEHSRKDGGKAAQKGPGDPSVPMSGRERWEYIRWKREREQIDLERLARHKNARGEWRRAWDVEKSEHMFEEDFVKDGEPALDNPSNKKGGRNARKFQQRNFPPDGRGAQHAVNVSDPGLKAVPAVSSRAKGKDRLTGRARRWDAKEGEELCFLKDDVEGQRNLGMDKQKSRGEEGVEENCTAELEEKVKQPSPQDHGASSSQRLPSGKVQAAHNSQKEEQGGVKGSSMEVAVASTGDPEPGPKTSVESVGEGAHGKPGTAAISQEEGSTPSTASNLPSTVPASRHSSEEPLSLPMGENASGAGSDQNTAPEQESREGSSNSPGGKLDTAVGDRLDAGQGQLVTKPGEEVTQDTALQGQTLALKGGEDAEGTEHRGEPLPPGKANPDKTVVSEQDTAQAQPREGEQPEDLKDKDSGDTLN
SIO_010081: CCDC9B
subclass of: SO_0000673
so part of: CCDC9B
location: join(632283..632303,637373..637486,638567..638671,639556..639720,643412..643561,651282..651356,653657..653841,655117..655178,655690..655743,656150..656252,659102..659159,659470..660249)
location: region:632283-660249:1
so has part: feature:632283-632303:1:exon
so has part: feature:637373-637486:1:exon
so has part: feature:638567-638671:1:exon
so has part: feature:639556-639720:1:exon
so has part: feature:643412-643561:1:exon
so has part: feature:651282-651356:1:exon
so has part: feature:653657-653841:1:exon
so has part: feature:655117-655178:1:exon
so has part: feature:655690-655743:1:exon
so has part: feature:656150-656252:1:exon
so has part: feature:659102-659159:1:exon
so has part: feature:659470-660249:1:exon

XP_030306927.1
type: Protein
SIO_000068: ncbiprotein