Calypte anna isolate BGI_N300 chromosome 4B, bCalAnn1_v1.p, whole genome shotgun sequence.
type: Entry
definition: Calypte anna isolate BGI_N300 chromosome 4B, bCalAnn1_v1.p, whole genome shotgun sequence.
sequence version: NC_044249.1
sequence date: 2019-08-24
sequence: sequence
division: CON
label: NC_044249.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA558503
dblink: SAMN02265252
keyword: WGS
keyword: RefSeq
source: Calypte anna (Anna's hummingbird)
organism: Calypte anna
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Apodiformes; Trochilidae; Calypte.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM012144.1.\nAssembly name: bCalAnn1_v1.p\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2019/05/16. The original whole-genome shotgun project has the\naccession RRCD00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 26-SEP-2018\nAssembly Method :: FALCON v. 5.1.1; FALCON unzip v. 1.0.2;\n scaff10X v. git 4.28.2018; Bionano Solve\n DLS v. 3.2.1; Salsa2 HiC v. 2.0;\n smrtanalysis Arrow polishing & gap\n filling v. 5.1.0.26412; longranger align\n v. 2.2.2; freebayes v. 1.2.0;\n purge_haplotigs v. bit 7.10.2018; gEVAL\n manual curation v. 2018-09-07\nAssembly Name :: bCalAnn1_v1.p\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 54.0x\nSequencing Technology :: PacBio RSII; 10X Genomics linked reads;\n Bionano Genomics DLS; Arima Genomics HiC\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Calypte anna Annotation Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 23291945
topology: linear
so has quality: SO_0000987
location: 1..23291945
location: region:1-23291945:1
RO_0002162: 9244

NC_044249
type: RefSeq
SIO_000068: refseq

PRJNA558503
type: BioProject
SIO_000068: bioproject

SAMN02265252
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23291945:1
position: 23291945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-23291945:1:source
so part of: sequence
organism: Calypte anna
mol type: genomic DNA
isolate: BGI_N300
chromosome: 4B
sex: female
country: USA

9244
type: Taxonomy
SIO_000068: taxonomy

LOC115598319
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115598319
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(20399..20782)
location: region:20399-20782:-1
so has part: feature:20399-20782:-1:exon
subclass of: SO_0000011

115598319
type: Gene
SIO_000068: ncbigene

position:20399:-1
position: 20399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20782:-1
position: 20782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20399-20782:-1:exon

LOC115598319
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115598319
product: uncharacterized LOC115598319
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003987567.1
SIO_010081: LOC115598319
subclass of: SO_0000673
so part of: LOC115598319
location: complement(join(20399..20445,20534..20596,20694..20782))
location: region:20399-20782:-1
so has part: feature:20694-20782:-1:exon
so has part: feature:20534-20596:-1:exon
so has part: feature:20399-20445:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20694-20782:-1:exon

position:20694:-1
position: 20694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:20534-20596:-1:exon

position:20534:-1
position: 20534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20596:-1
position: 20596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:20399-20445:-1:exon

position:20445:-1
position: 20445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PRDM5
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PRDM5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(126190..187478)
location: region:126190-187478:-1
so has part: feature:126190-187478:-1:exon
subclass of: SO_0000010

103537009
type: Gene
SIO_000068: ncbigene

position:126190:-1
position: 126190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187478:-1
position: 187478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126190-187478:-1:exon

PRDM5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PRDM5
product: PR/SET domain 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_008503258.2
SIO_010081: PRDM5
subclass of: SO_0000673
so part of: PRDM5
location: complement(join(126190..126826,131559..131663,139230..139315,150411..150504,151384..151544,153232..153325,158744..158901,160164..160248,167348..167427,169679..169800,170088..170180,171355..171529,172254..172437,176271..176393,183486..183569,187155..187478))
location: region:126190-187478:-1
so has part: feature:187155-187478:-1:exon
so has part: feature:183486-183569:-1:exon
so has part: feature:176271-176393:-1:exon
so has part: feature:172254-172437:-1:exon
so has part: feature:171355-171529:-1:exon
so has part: feature:170088-170180:-1:exon
so has part: feature:169679-169800:-1:exon
so has part: feature:167348-167427:-1:exon
so has part: feature:160164-160248:-1:exon
so has part: feature:158744-158901:-1:exon
so has part: feature:153232-153325:-1:exon
so has part: feature:151384-151544:-1:exon
so has part: feature:150411-150504:-1:exon
so has part: feature:139230-139315:-1:exon
so has part: feature:131559-131663:-1:exon
so has part: feature:126190-126826:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:187155-187478:-1:exon

position:187155:-1
position: 187155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:183486-183569:-1:exon

position:183486:-1
position: 183486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183569:-1
position: 183569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:176271-176393:-1:exon

position:176271:-1
position: 176271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176393:-1
position: 176393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:172254-172437:-1:exon

position:172254:-1
position: 172254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172437:-1
position: 172437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:171355-171529:-1:exon

position:171355:-1
position: 171355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171529:-1
position: 171529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:170088-170180:-1:exon

position:170088:-1
position: 170088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170180:-1
position: 170180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:169679-169800:-1:exon

position:169679:-1
position: 169679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169800:-1
position: 169800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:167348-167427:-1:exon

position:167348:-1
position: 167348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167427:-1
position: 167427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:160164-160248:-1:exon

position:160164:-1
position: 160164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160248:-1
position: 160248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:158744-158901:-1:exon

position:158744:-1
position: 158744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158901:-1
position: 158901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:153232-153325:-1:exon

position:153232:-1
position: 153232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153325:-1
position: 153325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:151384-151544:-1:exon

position:151384:-1
position: 151384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151544:-1
position: 151544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:150411-150504:-1:exon

position:150411:-1
position: 150411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150504:-1
position: 150504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:139230-139315:-1:exon

position:139230:-1
position: 139230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139315:-1
position: 139315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:131559-131663:-1:exon

position:131559:-1
position: 131559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131663:-1
position: 131663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:126190-126826:-1:exon

position:126826:-1
position: 126826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PRDM5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PRDM5
product: PR/SET domain 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030450600.1
SIO_010081: PRDM5
subclass of: SO_0000673
so part of: PRDM5
location: complement(join(126190..126826,131559..131663,139230..139315,150411..150504,151384..151544,153232..153325,158744..158901,160164..160248,167348..167427,169679..169800,170088..170180,171355..171529,172254..172437,176271..176393,183486..183569,186667..186711))
location: region:126190-186711:-1
so has part: feature:186667-186711:-1:exon
so has part: feature:183486-183569:-1:exon
so has part: feature:176271-176393:-1:exon
so has part: feature:172254-172437:-1:exon
so has part: feature:171355-171529:-1:exon
so has part: feature:170088-170180:-1:exon
so has part: feature:169679-169800:-1:exon
so has part: feature:167348-167427:-1:exon
so has part: feature:160164-160248:-1:exon
so has part: feature:158744-158901:-1:exon
so has part: feature:153232-153325:-1:exon
so has part: feature:151384-151544:-1:exon
so has part: feature:150411-150504:-1:exon
so has part: feature:139230-139315:-1:exon
so has part: feature:131559-131663:-1:exon
so has part: feature:126190-126826:-1:exon

position:186711:-1
position: 186711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186667-186711:-1:exon

position:186667:-1
position: 186667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:183486-183569:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:176271-176393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:172254-172437:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:171355-171529:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:170088-170180:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:169679-169800:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:167348-167427:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:160164-160248:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:158744-158901:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:153232-153325:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:151384-151544:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:150411-150504:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:139230-139315:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:131559-131663:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:126190-126826:-1:exon

PRDM5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PRDM5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 5 isoform X1
translation: MLGMYVPDRFALKSSKVQDGMGLYTARRVKKGEKFGPFAGEKRMPQELDEDTDCRLMWEVRGSKGEVLYILDASNPRHSNWLRFVHEAPSQEQKNLAAIQEGENIFYLAVEDIETDTELLIGYLDSDMEEEEEEEEEVTAIQEDEGSGNKKEVHPVGEKTADLLTCKQDHVCPYCESSFASQEILAEHLQTLHQKPSEEKEFKCRNCGKKFPVKQALQRHVLQCTENISPGDSTRSFQCSVCNTSFSSELSYEQHKEACRRDARFICKADSCGKRFKSKDALKKHKENVHSGNSRKKLLCSVCNKKCSSTANLQEHRKVHEIFECQECDKKFISANQLKRHMITHSEKRPYTCEVCNKSFKRLDQVTAHKIIHSEDKPYKCKLCGKGFAHRNVYKNHKKTHSEERPFQCEECKALFRTPFSLQRHLLIHNSERTFKCDHCDATFKRKDTLNVHIQVVHDGHKKYKCDLCDKAFVTPSVLKSHKKTHTGEKEKICPYCGQKFASNGTLRVHIRSHTGERPYQCPYCDKAFSKNDGLKMHIRTHTREKPYQCSECNKAFSQKRGLDEHMRTHTGEKPFQCDVCDLSFSLKKMLIRHKLTHNPNRPMAECQLCHKKFTRNDYLKVHMENVHGETDS
SIO_010081: PRDM5
subclass of: SO_0000673
so part of: PRDM5
location: complement(join(126662..126826,131559..131663,139230..139315,150411..150504,151384..151544,153232..153325,158744..158901,160164..160248,167348..167427,169679..169800,170088..170180,171355..171529,172254..172437,176271..176393,183486..183569,187155..187247))
location: region:126662-187247:-1
so has part: feature:187155-187247:-1:exon
so has part: feature:183486-183569:-1:exon
so has part: feature:176271-176393:-1:exon
so has part: feature:172254-172437:-1:exon
so has part: feature:171355-171529:-1:exon
so has part: feature:170088-170180:-1:exon
so has part: feature:169679-169800:-1:exon
so has part: feature:167348-167427:-1:exon
so has part: feature:160164-160248:-1:exon
so has part: feature:158744-158901:-1:exon
so has part: feature:153232-153325:-1:exon
so has part: feature:151384-151544:-1:exon
so has part: feature:150411-150504:-1:exon
so has part: feature:139230-139315:-1:exon
so has part: feature:131559-131663:-1:exon
so has part: feature:126662-126826:-1:exon

XP_008501480.1
type: Protein
SIO_000068: ncbiprotein

position:126662:-1
position: 126662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187247:-1
position: 187247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187155-187247:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:183486-183569:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:176271-176393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:172254-172437:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:171355-171529:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:170088-170180:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:169679-169800:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:167348-167427:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:160164-160248:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:158744-158901:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:153232-153325:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:151384-151544:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:150411-150504:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:139230-139315:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:131559-131663:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:126662-126826:-1:exon

PRDM5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PRDM5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 5 isoform X2
translation: MPQELDEDTDCRLMWEVRGSKGEVLYILDASNPRHSNWLRFVHEAPSQEQKNLAAIQEGENIFYLAVEDIETDTELLIGYLDSDMEEEEEEEEEVTAIQEDEGSGNKKEVHPVGEKTADLLTCKQDHVCPYCESSFASQEILAEHLQTLHQKPSEEKEFKCRNCGKKFPVKQALQRHVLQCTENISPGDSTRSFQCSVCNTSFSSELSYEQHKEACRRDARFICKADSCGKRFKSKDALKKHKENVHSGNSRKKLLCSVCNKKCSSTANLQEHRKVHEIFECQECDKKFISANQLKRHMITHSEKRPYTCEVCNKSFKRLDQVTAHKIIHSEDKPYKCKLCGKGFAHRNVYKNHKKTHSEERPFQCEECKALFRTPFSLQRHLLIHNSERTFKCDHCDATFKRKDTLNVHIQVVHDGHKKYKCDLCDKAFVTPSVLKSHKKTHTGEKEKICPYCGQKFASNGTLRVHIRSHTGERPYQCPYCDKAFSKNDGLKMHIRTHTREKPYQCSECNKAFSQKRGLDEHMRTHTGEKPFQCDVCDLSFSLKKMLIRHKLTHNPNRPMAECQLCHKKFTRNDYLKVHMENVHGETDS
SIO_010081: PRDM5
subclass of: SO_0000673
so part of: PRDM5
location: complement(join(126662..126826,131559..131663,139230..139315,150411..150504,151384..151544,153232..153325,158744..158901,160164..160248,167348..167427,169679..169800,170088..170180,171355..171529,172254..172437,176271..176393,183486..183533))
location: region:126662-183533:-1
so has part: feature:183486-183533:-1:exon
so has part: feature:176271-176393:-1:exon
so has part: feature:172254-172437:-1:exon
so has part: feature:171355-171529:-1:exon
so has part: feature:170088-170180:-1:exon
so has part: feature:169679-169800:-1:exon
so has part: feature:167348-167427:-1:exon
so has part: feature:160164-160248:-1:exon
so has part: feature:158744-158901:-1:exon
so has part: feature:153232-153325:-1:exon
so has part: feature:151384-151544:-1:exon
so has part: feature:150411-150504:-1:exon
so has part: feature:139230-139315:-1:exon
so has part: feature:131559-131663:-1:exon
so has part: feature:126662-126826:-1:exon

XP_030306460.1
type: Protein
SIO_000068: ncbiprotein

position:183533:-1
position: 183533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183486-183533:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:176271-176393:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:172254-172437:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171355-171529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:170088-170180:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:169679-169800:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:167348-167427:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:160164-160248:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:158744-158901:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:153232-153325:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:151384-151544:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:150411-150504:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:139230-139315:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:131559-131663:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:126662-126826:-1:exon

NDNF
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: NDNF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(206164..228706)
location: region:206164-228706:-1
so has part: feature:206164-228706:-1:exon
subclass of: SO_0000010

103537008
type: Gene
SIO_000068: ncbigene

position:206164:-1
position: 206164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228706:-1
position: 228706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206164-228706:-1:exon

NDNF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NDNF
product: neuron derived neurotrophic factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 10 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_008503257.2
SIO_010081: NDNF
subclass of: SO_0000673
so part of: NDNF
location: complement(join(206164..207671,208507..208631,209673..209867,227281..227393,228144..228225,228635..228706))
location: region:206164-228706:-1
so has part: feature:228635-228706:-1:exon
so has part: feature:228144-228225:-1:exon
so has part: feature:227281-227393:-1:exon
so has part: feature:209673-209867:-1:exon
so has part: feature:208507-208631:-1:exon
so has part: feature:206164-207671:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:228635-228706:-1:exon

position:228635:-1
position: 228635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:228144-228225:-1:exon

position:228144:-1
position: 228144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228225:-1
position: 228225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:227281-227393:-1:exon

position:227281:-1
position: 227281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227393:-1
position: 227393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:209673-209867:-1:exon

position:209673:-1
position: 209673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209867:-1
position: 209867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:208507-208631:-1:exon

position:208507:-1
position: 208507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208631:-1
position: 208631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:206164-207671:-1:exon

position:207671:-1
position: 207671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NDNF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NDNF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NDNF
translation: MLLLCCPLLLVLLLLPLSSRPQKLPTRDEELFQMQIRDKAFFHDSSVIPDGAEISSYLFRDTPKRYFFVVEEDNTPLAVTVTPCDAPLEWKLSVQELPEEASGEGSGEPEPLEQQKHQITNEEGTELFSYKGNDVEYFVSASSPSGLYQLDLLSTEKDTHFKVYATTTPESDQPYPELPYDPRIDVTSLGRTTVTLAWKPSPTAFLLKQPIQYCIVINKEHNFKSLCAVEAKLSSDDAFMMAPKPGLDFSPFDFALFGFPSDNNSGKGFLKSSAKFGRQTSLKLRVDLHKVCIGNKNVFTVSDLKPDTQYYFDMFAVNTNTNMSTAYVGTFARTKEEAKQKTVELKDGKVTDVFIKRKGAKFLRFVPVSSHQKVTFSVHSCLDAVQIQVRRDGKLLLSQNVEGVRQFQFRGKAKAKYLIRLKGSKKGASMLKILATSRPNKQSFPSLPEDTRIKAFDKLRTCSMVTVAWLGTQERNKFCIYKREVDDNYNEEQKKREQNQCLGPDTRKKSEKVLCKYFHSQNIQKAVTTETIRGLQPGKSYLLDVYVIGHGGQSVKYQSKLVKMRKFC
SIO_010081: NDNF
subclass of: SO_0000673
so part of: NDNF
location: complement(join(206284..207671,208507..208631,209673..209866))
location: region:206284-209866:-1
so has part: feature:209673-209866:-1:exon
so has part: feature:208507-208631:-1:exon
so has part: feature:206284-207671:-1:exon

XP_008501479.1
type: Protein
SIO_000068: ncbiprotein

position:206284:-1
position: 206284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209866:-1
position: 209866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209673-209866:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:208507-208631:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:206284-207671:-1:exon

TNIP3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: TNIP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(230290..276046)
location: region:230290-276046:-1
so has part: feature:230290-276046:-1:exon
subclass of: SO_0000010

103537032
type: Gene
SIO_000068: ncbigene

position:230290:-1
position: 230290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276046:-1
position: 276046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230290-276046:-1:exon

TNIP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TNIP3
product: TNFAIP3 interacting protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030450881.1
SIO_010081: TNIP3
subclass of: SO_0000673
so part of: TNIP3
location: complement(join(230290..230382,231561..231621,237827..237914,246053..246113,249531..249689,254301..254417,258138..258266,259889..260021,275472..276046))
location: region:230290-276046:-1
so has part: feature:275472-276046:-1:exon
so has part: feature:259889-260021:-1:exon
so has part: feature:258138-258266:-1:exon
so has part: feature:254301-254417:-1:exon
so has part: feature:249531-249689:-1:exon
so has part: feature:246053-246113:-1:exon
so has part: feature:237827-237914:-1:exon
so has part: feature:231561-231621:-1:exon
so has part: feature:230290-230382:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:275472-276046:-1:exon

position:275472:-1
position: 275472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:259889-260021:-1:exon

position:259889:-1
position: 259889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260021:-1
position: 260021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:258138-258266:-1:exon

position:258138:-1
position: 258138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258266:-1
position: 258266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:254301-254417:-1:exon

position:254301:-1
position: 254301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254417:-1
position: 254417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:249531-249689:-1:exon

position:249531:-1
position: 249531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249689:-1
position: 249689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:246053-246113:-1:exon

position:246053:-1
position: 246053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246113:-1
position: 246113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:237827-237914:-1:exon

position:237827:-1
position: 237827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237914:-1
position: 237914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:231561-231621:-1:exon

position:231561:-1
position: 231561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231621:-1
position: 231621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:230290-230382:-1:exon

position:230382:-1
position: 230382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TNIP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TNIP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TNFAIP3-interacting protein 3
translation: MLIGCRPVHKRRRLRAVPPSRSLSPDERGGVGAAFFSGSCLCFFPRFCPRTGAGPVLAVSPRASTERRRGAEASEGGSHAVPEYHLGAVRAATAGQQRDVGTVPSFLRAAAAGLYPGAAGAHQGVLHSYLRDYFRPGALRQLPSALRGDPQHSHEDSHQHLHLFPGAQRPPHRLLLRPLHHAAEHLLQVARWYESKELDVELRNPIEKHNTYQLYEDRKPIAQESPSPQRTLCSLEKETKVLSEALPEMEEENKLLKEKNASVIRMKEHYECEIACLNKALLNVLEKQHSPVLGTTSEEGDRNSLEDMRTQLEVPRQQMKDFLVQSERPSYPPPLYLSPRINYGNCGLVLHYQDPQAHGTSGRAHEQQHHSPDYQWYVPDQFPPDVQHKANGAVICLN
SIO_010081: TNIP3
subclass of: SO_0000673
so part of: TNIP3
location: complement(join(237892..237914,246053..246113,249531..249689,254301..254417,258138..258266,259889..260021,275472..276046))
location: region:237892-276046:-1
so has part: feature:275472-276046:-1:exon
so has part: feature:259889-260021:-1:exon
so has part: feature:258138-258266:-1:exon
so has part: feature:254301-254417:-1:exon
so has part: feature:249531-249689:-1:exon
so has part: feature:246053-246113:-1:exon
so has part: feature:237892-237914:-1:exon

XP_030306741.1
type: Protein
SIO_000068: ncbiprotein

position:237892:-1
position: 237892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275472-276046:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:259889-260021:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:258138-258266:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:254301-254417:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249531-249689:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:246053-246113:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:237892-237914:-1:exon

ANXA5
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ANXA5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(281662..300452)
location: region:281662-300452:-1
so has part: feature:281662-300452:-1:exon
subclass of: SO_0000010

103537007
type: Gene
SIO_000068: ncbigene

position:281662:-1
position: 281662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300452:-1
position: 300452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281662-300452:-1:exon

ANXA5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ANXA5
product: annexin A5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 16 ESTs, 1 long SRA read, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030450556.1
SIO_010081: ANXA5
subclass of: SO_0000673
so part of: ANXA5
location: complement(join(281662..282226,283331..283453,285940..285998,286533..286628,288075..288168,288776..288832,289281..289360,290326..290416,292388..292501,293326..293420,294520..294604,300188..300234,300346..300452))
location: region:281662-300452:-1
so has part: feature:300346-300452:-1:exon
so has part: feature:300188-300234:-1:exon
so has part: feature:294520-294604:-1:exon
so has part: feature:293326-293420:-1:exon
so has part: feature:292388-292501:-1:exon
so has part: feature:290326-290416:-1:exon
so has part: feature:289281-289360:-1:exon
so has part: feature:288776-288832:-1:exon
so has part: feature:288075-288168:-1:exon
so has part: feature:286533-286628:-1:exon
so has part: feature:285940-285998:-1:exon
so has part: feature:283331-283453:-1:exon
so has part: feature:281662-282226:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:300346-300452:-1:exon

position:300346:-1
position: 300346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:300188-300234:-1:exon

position:300188:-1
position: 300188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300234:-1
position: 300234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:294520-294604:-1:exon

position:294520:-1
position: 294520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294604:-1
position: 294604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:293326-293420:-1:exon

position:293326:-1
position: 293326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293420:-1
position: 293420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:292388-292501:-1:exon

position:292388:-1
position: 292388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292501:-1
position: 292501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:290326-290416:-1:exon

position:290326:-1
position: 290326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290416:-1
position: 290416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:289281-289360:-1:exon

position:289281:-1
position: 289281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289360:-1
position: 289360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:288776-288832:-1:exon

position:288776:-1
position: 288776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288832:-1
position: 288832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:288075-288168:-1:exon

position:288075:-1
position: 288075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288168:-1
position: 288168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:286533-286628:-1:exon

position:286533:-1
position: 286533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286628:-1
position: 286628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:285940-285998:-1:exon

position:285940:-1
position: 285940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285998:-1
position: 285998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:283331-283453:-1:exon

position:283331:-1
position: 283331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283453:-1
position: 283453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:281662-282226:-1:exon

position:282226:-1
position: 282226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANXA5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ANXA5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: annexin A5
translation: MAKDTRGTVTAFSPFDARADAEALRKAMKGMGTDEETILKILTSRNNCQRQEIASAFKTLFGRDLVDDLKSELTGKFETLMVSLMRPTYIFDAHALKHAIKGAGTSEKVLIEILASRTPEEVRRIKQVYQQEYEASLEDKITGETSGHFQRLLVVLLQANRDPDGGVDEGLVEQDAQVLFRAGELKWGTDEEKFITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGDLENLLLAVVKCIRSVPAYFAETLYYSMKGAGTDDDTLIRVMVSRSEIDLLNIRQELRKNFAKSLHQMIQKDTSGDYRKALLLLCGGDDD
SIO_010081: ANXA5
subclass of: SO_0000673
so part of: ANXA5
location: complement(join(282164..282226,283331..283453,285940..285998,286533..286628,288075..288168,288776..288832,289281..289360,290326..290416,292388..292501,293326..293420,294520..294604,300188..300196))
location: region:282164-300196:-1
so has part: feature:300188-300196:-1:exon
so has part: feature:294520-294604:-1:exon
so has part: feature:293326-293420:-1:exon
so has part: feature:292388-292501:-1:exon
so has part: feature:290326-290416:-1:exon
so has part: feature:289281-289360:-1:exon
so has part: feature:288776-288832:-1:exon
so has part: feature:288075-288168:-1:exon
so has part: feature:286533-286628:-1:exon
so has part: feature:285940-285998:-1:exon
so has part: feature:283331-283453:-1:exon
so has part: feature:282164-282226:-1:exon

XP_030306416.1
type: Protein
SIO_000068: ncbiprotein

position:282164:-1
position: 282164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300196:-1
position: 300196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300188-300196:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:294520-294604:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:293326-293420:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:292388-292501:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:290326-290416:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:289281-289360:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:288776-288832:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:288075-288168:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:286533-286628:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:285940-285998:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:283331-283453:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:282164-282226:-1:exon

EXOSC9
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: EXOSC9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 310094..316484
location: region:310094-316484:1
so has part: feature:310094-316484:1:exon
subclass of: SO_0000010

103537029
type: Gene
SIO_000068: ncbigene

position:310094:1
position: 310094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316484:1
position: 316484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310094-316484:1:exon

EXOSC9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: EXOSC9
product: exosome component 9, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 long SRA reads, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_030450719.1
SIO_010081: EXOSC9
subclass of: SO_0000673
so part of: EXOSC9
location: join(310094..310255,310491..310585,311192..311311,311420..311522,311966..312103,312531..312613,312938..313070,313575..313663,313863..314009,314362..314552,314878..314956,315453..316484)
location: region:310094-316484:1
so has part: feature:310094-310255:1:exon
so has part: feature:310491-310585:1:exon
so has part: feature:311192-311311:1:exon
so has part: feature:311420-311522:1:exon
so has part: feature:311966-312103:1:exon
so has part: feature:312531-312613:1:exon
so has part: feature:312938-313070:1:exon
so has part: feature:313575-313663:1:exon
so has part: feature:313863-314009:1:exon
so has part: feature:314362-314552:1:exon
so has part: feature:314878-314956:1:exon
so has part: feature:315453-316484:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:310094-310255:1:exon

position:310255:1
position: 310255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:310491-310585:1:exon

position:310491:1
position: 310491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310585:1
position: 310585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:311192-311311:1:exon

position:311192:1
position: 311192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311311:1
position: 311311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:311420-311522:1:exon

position:311420:1
position: 311420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311522:1
position: 311522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:311966-312103:1:exon

position:311966:1
position: 311966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312103:1
position: 312103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:312531-312613:1:exon

position:312531:1
position: 312531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312613:1
position: 312613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:312938-313070:1:exon

position:312938:1
position: 312938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313070:1
position: 313070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:313575-313663:1:exon

position:313575:1
position: 313575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313663:1
position: 313663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:313863-314009:1:exon

position:313863:1
position: 313863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314009:1
position: 314009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:314362-314552:1:exon

position:314362:1
position: 314362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314552:1
position: 314552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:314878-314956:1:exon

position:314878:1
position: 314878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314956:1
position: 314956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:315453-316484:1:exon

position:315453:1
position: 315453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EXOSC9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: EXOSC9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exosome complex component RRP45 isoform X1
translation: MKAPPLSNCERRFLLKAIEERKRLDGRQCYDYRNVRISFGADYGCCIVELGKTRVLAQVSCELVTPKPNRPTEGILFFNLELSPMAAPGFEPGRQSELLVKLNRLIERCLRNSKCIDTESLCIVAGEKVWQIRLDLHLLNHDGNITDAAGMAGIAALCHFRRPEVSVQGDEVTVYTPEERDPVPLSIHHMPVCVSFAFFQQGTYLLVDPSEREESVMDGVLVIAMNKHQEICTIQSSGGIMLVKDQVLRCSKITAVKVAEITELIQKALENDQKVRKEGGKFGFAESIPNQKITAFKMESAAVDTNNVEEQAEEIITKADPPSEVFAKPILHTPGTAQIGEGIENSWGDLEESEKEEAVEEEGESETPSLKCQKMEAEDTSTLTETEKDEPIVLSDSEEEEVVILEPQELPKKTRTQTNSKQESTSKKAFNKRRRKKRAAY
SIO_010081: EXOSC9
subclass of: SO_0000673
so part of: EXOSC9
location: join(310190..310255,310491..310585,311192..311311,311420..311522,311966..312103,312531..312613,312938..313070,313575..313663,313863..314009,314362..314552,314878..314956,315453..315534)
location: region:310190-315534:1
so has part: feature:310190-310255:1:exon
so has part: feature:310491-310585:1:exon
so has part: feature:311192-311311:1:exon
so has part: feature:311420-311522:1:exon
so has part: feature:311966-312103:1:exon
so has part: feature:312531-312613:1:exon
so has part: feature:312938-313070:1:exon
so has part: feature:313575-313663:1:exon
so has part: feature:313863-314009:1:exon
so has part: feature:314362-314552:1:exon
so has part: feature:314878-314956:1:exon
so has part: feature:315453-315534:1:exon

XP_030306579.1
type: Protein
SIO_000068: ncbiprotein

position:310190:1
position: 310190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315534:1
position: 315534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310190-310255:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310491-310585:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:311192-311311:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:311420-311522:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:311966-312103:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312531-312613:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:312938-313070:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:313575-313663:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:313863-314009:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:314362-314552:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:314878-314956:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:315453-315534:1:exon

EXOSC9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: EXOSC9
product: exosome component 9, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030450720.1
SIO_010081: EXOSC9
subclass of: SO_0000673
so part of: EXOSC9
location: join(310382..310440,310477..310585,311192..311311,311420..311522,311966..312103,312531..312613,312938..313070,313575..313663,313863..314009,314362..314552,314878..314956,315453..316484)
location: region:310382-316484:1
so has part: feature:310382-310440:1:exon
so has part: feature:310477-310585:1:exon
so has part: feature:311192-311311:1:exon
so has part: feature:311420-311522:1:exon
so has part: feature:311966-312103:1:exon
so has part: feature:312531-312613:1:exon
so has part: feature:312938-313070:1:exon
so has part: feature:313575-313663:1:exon
so has part: feature:313863-314009:1:exon
so has part: feature:314362-314552:1:exon
so has part: feature:314878-314956:1:exon
so has part: feature:315453-316484:1:exon

position:310382:1
position: 310382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310382-310440:1:exon

position:310440:1
position: 310440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:310477-310585:1:exon

position:310477:1
position: 310477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:311192-311311:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:311420-311522:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:311966-312103:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312531-312613:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:312938-313070:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:313575-313663:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:313863-314009:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:314362-314552:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:314878-314956:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:315453-316484:1:exon

EXOSC9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: EXOSC9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exosome complex component RRP45 isoform X2
translation: MAAPGFEPGRQSELLVKLNRLIERCLRNSKCIDTESLCIVAGEKVWQIRLDLHLLNHDGNITDAAGMAGIAALCHFRRPEVSVQGDEVTVYTPEERDPVPLSIHHMPVCVSFAFFQQGTYLLVDPSEREESVMDGVLVIAMNKHQEICTIQSSGGIMLVKDQVLRCSKITAVKVAEITELIQKALENDQKVRKEGGKFGFAESIPNQKITAFKMESAAVDTNNVEEQAEEIITKADPPSEVFAKPILHTPGTAQIGEGIENSWGDLEESEKEEAVEEEGESETPSLKCQKMEAEDTSTLTETEKDEPIVLSDSEEEEVVILEPQELPKKTRTQTNSKQESTSKKAFNKRRRKKRAAY
SIO_010081: EXOSC9
subclass of: SO_0000673
so part of: EXOSC9
location: join(311283..311311,311420..311522,311966..312103,312531..312613,312938..313070,313575..313663,313863..314009,314362..314552,314878..314956,315453..315534)
location: region:311283-315534:1
so has part: feature:311283-311311:1:exon
so has part: feature:311420-311522:1:exon
so has part: feature:311966-312103:1:exon
so has part: feature:312531-312613:1:exon
so has part: feature:312938-313070:1:exon
so has part: feature:313575-313663:1:exon
so has part: feature:313863-314009:1:exon
so has part: feature:314362-314552:1:exon
so has part: feature:314878-314956:1:exon
so has part: feature:315453-315534:1:exon

XP_030306580.1
type: Protein
SIO_000068: ncbiprotein

position:311283:1
position: 311283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311283-311311:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:311420-311522:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:311966-312103:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:312531-312613:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:312938-313070:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:313575-313663:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:313863-314009:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:314362-314552:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:314878-314956:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:315453-315534:1:exon

CCNA2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: CCNA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(317881..323162)
location: region:317881-323162:-1
so has part: feature:317881-323162:-1:exon
subclass of: SO_0000010

103537006
type: Gene
SIO_000068: ncbigene

position:317881:-1
position: 317881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323162:-1
position: 323162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317881-323162:-1:exon

CCNA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CCNA2
product: cyclin A2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 11 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030450721.1
SIO_010081: CCNA2
subclass of: SO_0000673
so part of: CCNA2
location: complement(join(317881..318257,318629..318762,319164..319277,319538..319742,320331..320554,320900..321012,322534..322774,322943..323162))
location: region:317881-323162:-1
so has part: feature:322943-323162:-1:exon
so has part: feature:322534-322774:-1:exon
so has part: feature:320900-321012:-1:exon
so has part: feature:320331-320554:-1:exon
so has part: feature:319538-319742:-1:exon
so has part: feature:319164-319277:-1:exon
so has part: feature:318629-318762:-1:exon
so has part: feature:317881-318257:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:322943-323162:-1:exon

position:322943:-1
position: 322943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:322534-322774:-1:exon

position:322534:-1
position: 322534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322774:-1
position: 322774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:320900-321012:-1:exon

position:320900:-1
position: 320900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321012:-1
position: 321012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:320331-320554:-1:exon

position:320331:-1
position: 320331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320554:-1
position: 320554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:319538-319742:-1:exon

position:319538:-1
position: 319538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319742:-1
position: 319742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:319164-319277:-1:exon

position:319164:-1
position: 319164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319277:-1
position: 319277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:318629-318762:-1:exon

position:318629:-1
position: 318629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318762:-1
position: 318762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:317881-318257:-1:exon

position:318257:-1
position: 318257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCNA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CCNA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-A2
translation: MLAEQENQENVPPGSKAQPPAGTRVALGLLRGAQQRPGLSLQAARGGGEGHGAAAGRPVGGQQPFTIHVDEPDGEQQQRRRRRGSPATQKEEAAALGLRAAVCALGVRRPLAPLDNAMELSFDSPSIMDISITSEAEEKPNVNNVPDYIGDIHQYLREMEVKCKPKIGYMKKQPDITNNMRAILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEFVYITDDTYTKKQVLRMEHLILKVLSFDLAAPTINQFLTQYFLHQQPNAKVESLSMYLGELSLIDADPYLKYLPSVIAAAAFHLADYTITGQSWPEALCKVTGYTLEDIKPCLMDLHKTYLKAAQHTQQSIREKYKSTKYHGVSLIDPPETLNLLQ
SIO_010081: CCNA2
subclass of: SO_0000673
so part of: CCNA2
location: complement(join(318203..318257,318629..318762,319164..319277,319538..319742,320331..320554,320900..321012,322534..322774,322943..323068))
location: region:318203-323068:-1
so has part: feature:322943-323068:-1:exon
so has part: feature:322534-322774:-1:exon
so has part: feature:320900-321012:-1:exon
so has part: feature:320331-320554:-1:exon
so has part: feature:319538-319742:-1:exon
so has part: feature:319164-319277:-1:exon
so has part: feature:318629-318762:-1:exon
so has part: feature:318203-318257:-1:exon

XP_030306581.1
type: Protein
SIO_000068: ncbiprotein

position:318203:-1
position: 318203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323068:-1
position: 323068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322943-323068:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322534-322774:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:320900-321012:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:320331-320554:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:319538-319742:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:319164-319277:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:318629-318762:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:318203-318257:-1:exon

BBS7
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: BBS7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(323952..342677)
location: region:323952-342677:-1
so has part: feature:323952-342677:-1:exon
subclass of: SO_0000010

103537028
type: Gene
SIO_000068: ncbigene

position:323952:-1
position: 323952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342677:-1
position: 342677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323952-342677:-1:exon

BBS7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: BBS7
product: Bardet-Biedl syndrome 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 1 long SRA read, 10 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030450633.1
SIO_010081: BBS7
subclass of: SO_0000673
so part of: BBS7
location: complement(join(323952..324648,325213..325336,325980..326083,326191..326300,327403..327567,328500..328639,330030..330095,330985..331059,332509..332701,333691..333793,335467..335551,336320..336450,337807..337923,338819..338891,339558..339744,340347..340522,341365..341427,342215..342280,342574..342677))
location: region:323952-342677:-1
so has part: feature:342574-342677:-1:exon
so has part: feature:342215-342280:-1:exon
so has part: feature:341365-341427:-1:exon
so has part: feature:340347-340522:-1:exon
so has part: feature:339558-339744:-1:exon
so has part: feature:338819-338891:-1:exon
so has part: feature:337807-337923:-1:exon
so has part: feature:336320-336450:-1:exon
so has part: feature:335467-335551:-1:exon
so has part: feature:333691-333793:-1:exon
so has part: feature:332509-332701:-1:exon
so has part: feature:330985-331059:-1:exon
so has part: feature:330030-330095:-1:exon
so has part: feature:328500-328639:-1:exon
so has part: feature:327403-327567:-1:exon
so has part: feature:326191-326300:-1:exon
so has part: feature:325980-326083:-1:exon
so has part: feature:325213-325336:-1:exon
so has part: feature:323952-324648:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:342574-342677:-1:exon

position:342574:-1
position: 342574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:342215-342280:-1:exon

position:342215:-1
position: 342215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342280:-1
position: 342280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:341365-341427:-1:exon

position:341365:-1
position: 341365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341427:-1
position: 341427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:340347-340522:-1:exon

position:340347:-1
position: 340347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340522:-1
position: 340522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:339558-339744:-1:exon

position:339558:-1
position: 339558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339744:-1
position: 339744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:338819-338891:-1:exon

position:338819:-1
position: 338819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338891:-1
position: 338891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:337807-337923:-1:exon

position:337807:-1
position: 337807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337923:-1
position: 337923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:336320-336450:-1:exon

position:336320:-1
position: 336320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336450:-1
position: 336450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:335467-335551:-1:exon

position:335467:-1
position: 335467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335551:-1
position: 335551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:333691-333793:-1:exon

position:333691:-1
position: 333691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333793:-1
position: 333793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:332509-332701:-1:exon

position:332509:-1
position: 332509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332701:-1
position: 332701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:330985-331059:-1:exon

position:330985:-1
position: 330985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331059:-1
position: 331059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:330030-330095:-1:exon

position:330030:-1
position: 330030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330095:-1
position: 330095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:328500-328639:-1:exon

position:328500:-1
position: 328500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328639:-1
position: 328639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:327403-327567:-1:exon

position:327403:-1
position: 327403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327567:-1
position: 327567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:326191-326300:-1:exon

position:326191:-1
position: 326191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326300:-1
position: 326300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:325980-326083:-1:exon

position:325980:-1
position: 325980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326083:-1
position: 326083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:325213-325336:-1:exon

position:325213:-1
position: 325213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325336:-1
position: 325336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:323952-324648:-1:exon

position:324648:-1
position: 324648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BBS7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: BBS7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Bardet-Biedl syndrome 7 protein
translation: MELSLSRVDYLQVGVTAQKTMRLLPSSGKRATQKVVVGDQDGVVTCFGIKKGEAVPVFKTLPGQKIERLELGGALNTPQEKIFVATGSEVRGFTKRGKQFLSFETNLTESIKAMYISGADLFLCASYIYNHYCDCKDQHYYLSGDKINDVLCLPVEKVNCITPVLACQDRVLRVLQGSDLLSEVQVPGPPTVLALNNGNGGDSGEEVVYGTLDGKLGLIQIAGAEAVPKWEVENEKKRGGVLCIDSFDILGDGVKELLVGRDDGMMEIYNFESADDPVLRYDYALSESIASIQGGCVGKDGYDEILASTYSGWLTGLTTEPVHKEGGSGEELKLSQEMQSKISSLRNELEHLQIKVLQEREKHQQSSQSSTAVSSVPTFSVNDKFTLNKDDASYSLILEVQTSIDNVLLQSDVPVDLLDVDKNSAVVSFSSCDSEPNSNFLLVTYRCQANTMRLELKVRSIEGQYGTLQAYVTPRIQPKTCQVRQYQIKPLSLHQRTHSIDHDRPMNTLMLKGQFSLSEIHSWVVFCLPEVPEKTPAGDSITFYFQNTFLGTQLESTYRKGEGCFKSDNISTISILKDVLSKEATKRKINLSISYDINEESVRHTLKLIHPKLEYQQLLAKKVHLIDALRELQVHEGNVDFLLPKYRSILEEADELLEEYKKQPAHLERLYGMITDLFIDKFKFKGTNVKTKVPLLLEILDGCDQDGLIAFFEAVA
SIO_010081: BBS7
subclass of: SO_0000673
so part of: BBS7
location: complement(join(324512..324648,325213..325336,325980..326083,326191..326300,327403..327567,328500..328639,330030..330095,330985..331059,332509..332701,333691..333793,335467..335551,336320..336450,337807..337923,338819..338891,339558..339744,340347..340522,341365..341427,342215..342280,342574..342609))
location: region:324512-342609:-1
so has part: feature:342574-342609:-1:exon
so has part: feature:342215-342280:-1:exon
so has part: feature:341365-341427:-1:exon
so has part: feature:340347-340522:-1:exon
so has part: feature:339558-339744:-1:exon
so has part: feature:338819-338891:-1:exon
so has part: feature:337807-337923:-1:exon
so has part: feature:336320-336450:-1:exon
so has part: feature:335467-335551:-1:exon
so has part: feature:333691-333793:-1:exon
so has part: feature:332509-332701:-1:exon
so has part: feature:330985-331059:-1:exon
so has part: feature:330030-330095:-1:exon
so has part: feature:328500-328639:-1:exon
so has part: feature:327403-327567:-1:exon
so has part: feature:326191-326300:-1:exon
so has part: feature:325980-326083:-1:exon
so has part: feature:325213-325336:-1:exon
so has part: feature:324512-324648:-1:exon

XP_030306493.1
type: Protein
SIO_000068: ncbiprotein

position:324512:-1
position: 324512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342609:-1
position: 342609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342574-342609:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:342215-342280:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:341365-341427:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:340347-340522:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:339558-339744:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:338819-338891:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:337807-337923:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:336320-336450:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:335467-335551:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:333691-333793:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:332509-332701:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:330985-331059:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:330030-330095:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:328500-328639:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:327403-327567:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:326191-326300:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:325980-326083:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:325213-325336:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:324512-324648:-1:exon

TRPC3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: TRPC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(343701..375127)
location: region:343701-375127:-1
so has part: feature:343701-375127:-1:exon
subclass of: SO_0000010

103537005
type: Gene
SIO_000068: ncbigene

position:343701:-1
position: 343701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375127:-1
position: 375127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343701-375127:-1:exon

TRPC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TRPC3
product: transient receptor potential cation channel subfamily C member 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 60% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030450650.1
SIO_010081: TRPC3
subclass of: SO_0000673
so part of: TRPC3
location: complement(join(343701..343860,345886..345961,346971..347054,347921..348130,348789..348984,349455..349719,350784..351017,352547..352788,366153..366904,375026..375127))
location: region:343701-375127:-1
so has part: feature:375026-375127:-1:exon
so has part: feature:366153-366904:-1:exon
so has part: feature:352547-352788:-1:exon
so has part: feature:350784-351017:-1:exon
so has part: feature:349455-349719:-1:exon
so has part: feature:348789-348984:-1:exon
so has part: feature:347921-348130:-1:exon
so has part: feature:346971-347054:-1:exon
so has part: feature:345886-345961:-1:exon
so has part: feature:343701-343860:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:375026-375127:-1:exon

position:375026:-1
position: 375026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:366153-366904:-1:exon

position:366153:-1
position: 366153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366904:-1
position: 366904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:352547-352788:-1:exon

position:352547:-1
position: 352547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352788:-1
position: 352788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:350784-351017:-1:exon

position:350784:-1
position: 350784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351017:-1
position: 351017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:349455-349719:-1:exon

position:349455:-1
position: 349455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349719:-1
position: 349719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:348789-348984:-1:exon

position:348789:-1
position: 348789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348984:-1
position: 348984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:347921-348130:-1:exon

position:347921:-1
position: 347921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348130:-1
position: 348130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:346971-347054:-1:exon

position:346971:-1
position: 346971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347054:-1
position: 347054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:345886-345961:-1:exon

position:345886:-1
position: 345886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345961:-1
position: 345961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:343701-343860:-1:exon

position:343860:-1
position: 343860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRPC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: TRPC3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: short transient receptor potential channel 3
translation: MYVEESPSLRRMTMMREKGRRQGHQGPAFMFNNRGTSLTAEEERFLDAAEYGNIPVVRKMLEESKTLNVNCVDYMGQNALQLAVGNEHLEVTELLLKKENLARIGDALLLAISKGYIRIVEAILNHPGFSVNKRLTLSPCEQELQDDDFYSYDEDGTRFSPDITPIILAAHCQKYEVVHMLLMKGARIERPHDYFCKCNDCTEKQKHDSFSHSRSRINAYKGLASPAYLSLSSEDPVLTALELSNELAQGCNYFHSAFQLGRILRSPFMKFVAHAASFIIFLGLLVFNASDRFEGITTLPNVTVTDYPKQIFRVKTTQFTWTEMLIMVWVLGMMWSECKELWLEGPREYILQLWNVLDFGMLSIFIAAFTARLLAFLQATKAQQYVDNHIKESDLSEVTLPPEIEYFTYARDKWLPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIMVFLAFMIGMFILYSYYLGAKLNPAFTTVEESFKTLFWSIFGLSEVTSVVLKYDHKFIENIGYVLYGIYNVTMVVVLLNMLIAMINSSYQEIEDDSDVEWKFARSKLWLSYFDDGKTLPPPFSLVPSPKSFFYFIMRIINFFKCRRRRLQKDIEMGMGNSKSRLNLFTQSNSRVFESHSFNSILNQPTRYQQIMKRLIKRYVLKAQVDKENDEVNEGELKEIKQDISSLRYELLEDKSQATEELAILIHKLSEKLNPNMLRCE
SIO_010081: TRPC3
subclass of: SO_0000673
so part of: TRPC3
location: complement(join(343718..343860,345886..345961,346971..347054,347921..348130,348789..348984,349455..349719,350784..351017,352547..352788,366153..366904,375026..375027))
location: region:343718-375027:-1
so has part: feature:375026-375027:-1:exon
so has part: feature:366153-366904:-1:exon
so has part: feature:352547-352788:-1:exon
so has part: feature:350784-351017:-1:exon
so has part: feature:349455-349719:-1:exon
so has part: feature:348789-348984:-1:exon
so has part: feature:347921-348130:-1:exon
so has part: feature:346971-347054:-1:exon
so has part: feature:345886-345961:-1:exon
so has part: feature:343718-343860:-1:exon

XP_030306510.1
type: Protein
SIO_000068: ncbiprotein

position:343718:-1
position: 343718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375027:-1
position: 375027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375026-375027:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:366153-366904:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:352547-352788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:350784-351017:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:349455-349719:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:348789-348984:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:347921-348130:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:346971-347054:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:345886-345961:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:343718-343860:-1:exon

KIAA1109
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: KIAA1109
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 403864..490616
location: region:403864-490616:1
so has part: feature:403864-490616:1:exon
subclass of: SO_0000010

103537027
type: Gene
SIO_000068: ncbigene

position:403864:1
position: 403864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490616:1
position: 490616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403864-490616:1:exon

KIAA1109
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: KIAA1109
product: KIAA1109 ortholog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 32 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030450371.1
SIO_010081: KIAA1109
subclass of: SO_0000673
so part of: KIAA1109
location: join(403864..403962,409054..409192,411636..411752,413030..413108,413766..413830,417118..417304,418452..418533,419115..419308,422224..422303,422696..422846,424658..424814,425528..425606,426378..426469,427327..427444,428523..428678,429654..429751,430718..430896,431038..431144,431897..432105,433755..433982,434554..434691,435354..435530,436170..436298,436553..436672,438030..438307,439068..439318,439789..440047,440465..441305,441717..441787,442271..442444,442707..442827,443431..443577,443869..443996,444398..444600,445164..445361,446122..446333,446661..446812,447502..447652,448747..448899,450007..450247,451380..451528,451810..452029,452801..452959,454141..454316,454804..454979,455592..456298,457625..457864,458249..458342,459817..459867,460362..460568,460721..460959,461498..461742,462377..462482,463213..463310,463553..463738,464142..464310,464852..465063,466137..466335,466848..466907,467951..468177,468678..468878,469093..469223,469673..469796,470199..470308,470785..470875,471245..471304,472865..473109,473413..473628,474363..474543,474757..474949,477103..477264,477376..477515,478511..478712,479105..479308,479425..479604,480724..480861,481196..481456,482532..482682,482851..483008,483506..483698,483890..484107,484750..485001,485553..485756,486933..487127,488025..488159,488754..488919,489916..490616)
location: region:403864-490616:1
so has part: feature:403864-403962:1:exon
so has part: feature:409054-409192:1:exon
so has part: feature:411636-411752:1:exon
so has part: feature:413030-413108:1:exon
so has part: feature:413766-413830:1:exon
so has part: feature:417118-417304:1:exon
so has part: feature:418452-418533:1:exon
so has part: feature:419115-419308:1:exon
so has part: feature:422224-422303:1:exon
so has part: feature:422696-422846:1:exon
so has part: feature:424658-424814:1:exon
so has part: feature:425528-425606:1:exon
so has part: feature:426378-426469:1:exon
so has part: feature:427327-427444:1:exon
so has part: feature:428523-428678:1:exon
so has part: feature:429654-429751:1:exon
so has part: feature:430718-430896:1:exon
so has part: feature:431038-431144:1:exon
so has part: feature:431897-432105:1:exon
so has part: feature:433755-433982:1:exon
so has part: feature:434554-434691:1:exon
so has part: feature:435354-435530:1:exon
so has part: feature:436170-436298:1:exon
so has part: feature:436553-436672:1:exon
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so has part: feature:439068-439318:1:exon
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SIO_000300: 71
SIO_000628: feature:477103-477264:1:exon

position:477103:1
position: 477103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477264:1
position: 477264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 72
SIO_000628: feature:477376-477515:1:exon

position:477376:1
position: 477376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477515:1
position: 477515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 73
SIO_000628: feature:478511-478712:1:exon

position:478511:1
position: 478511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478712:1
position: 478712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 74
SIO_000628: feature:479105-479308:1:exon

position:479105:1
position: 479105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479308:1
position: 479308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 75
SIO_000628: feature:479425-479604:1:exon

position:479425:1
position: 479425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479604:1
position: 479604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 76
SIO_000628: feature:480724-480861:1:exon

position:480724:1
position: 480724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480861:1
position: 480861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 77
SIO_000628: feature:481196-481456:1:exon

position:481196:1
position: 481196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481456:1
position: 481456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 78
SIO_000628: feature:482532-482682:1:exon

position:482532:1
position: 482532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:482682:1
position: 482682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 79
SIO_000628: feature:482851-483008:1:exon

position:482851:1
position: 482851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483008:1
position: 483008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 80
SIO_000628: feature:483506-483698:1:exon

position:483506:1
position: 483506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483698:1
position: 483698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 81
SIO_000628: feature:483890-484107:1:exon

position:483890:1
position: 483890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484107:1
position: 484107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 82
SIO_000628: feature:484750-485001:1:exon

position:484750:1
position: 484750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485001:1
position: 485001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 83
SIO_000628: feature:485553-485756:1:exon

position:485553:1
position: 485553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485756:1
position: 485756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 84
SIO_000628: feature:486933-487127:1:exon

position:486933:1
position: 486933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487127:1
position: 487127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 85
SIO_000628: feature:488025-488159:1:exon

position:488025:1
position: 488025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488159:1
position: 488159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 86
SIO_000628: feature:488754-488919:1:exon

position:488754:1
position: 488754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488919:1
position: 488919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 87
SIO_000628: feature:489916-490616:1:exon

position:489916:1
position: 489916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KIAA1109
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: KIAA1109
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein KIAA1109 homolog
translation: MDQRKNDSFVPSITQLEDFLTEHDSNVVWLLVATILSCGWIIYLTYYNSRNIGLILTLVLNRLYKNGYIHIGSFSFSVLSGKIMVREIYFITEDMSIRIQDGFIIFRWWKMYNPKQKQHDPKAETRLYIMVNDFEFHVYNRSELYGQLQELFGLDPTIIPVKKDDEKAQVNGRQRTHTNLQSVKVKTESQDPSSSWRSLIPVIKVNVSTGRLAFGNHYQPQTLCINFDDAFLTYTTKPPSSHLDQFMHIVKGKLENVRVMLVPSPRYVGLQNDEPPRLMGEGFVVMQSNDVDIYYYMDEPGLVPEETEESTDGEANNEDSKLQDLPPCWGLDIVCGKGTDFNYGPWADRQRDCLWKFFFPPDYQVMKVSEIAQPGKPRQILAFELRMNIIADATIDLLFTKNRETNAVHVNVGAGSYLEINIPMIVGENGYSPTIKGQLLHVDATSSMQYRTLLEAEMLAFHINASYPRIWNMPQTWQCELEVYKATYHFIFAQKSFFTDLIQDWSSDSAPDIFSFVPYMWNFKIMFHQFEMIWAANQHNWIDCSTKQQENVYLAACGETLNIVFSLPFTDFVPTTCNTRFSLRGEDVDLHLYLPDCHPSKYSLFMLVKDCQPNKISPESCIPAECQSGQKTSKPKWRNITQEEAGWIECWTVPSVVFTIDYSWHPIYPQKADEQLKQSLSEMEETMLSVLRPSQKAADSVIASPTASARLPLDPAELPPDRLHVELELSPDSQITLYGPLLKAFLSIKENYFGEDDMYTDFEEVISSPVLSLSTSSSSGWTAVGVENDKKENESSSKPVHPLTLRPWDITVLVNLYKVHGRLPVHCSPDGPECPTVFLERLCFEMKKGFRETMLQLVLSPVNLFLNDSYQRPAVDEVLREGHISLSGLQLRAHAMFSAEGLPLGSDTLEYAWLIDVQAGSLTAKVTAPQLACLLDWGQTFVFHVVCQEFELERPKSVIICQHGIDRRFCDSKMNCVPGPCPTSDDLKYTMTRLAMDGADLYVVEHGCATNIKMGAIRIANCNLHNQSVGEGVSAAIQDVQLRQYVEQVNNCRTGLQPILRRAYWLEAGSVNLGLITADVALAADHPAKHEVQRHFLETHDNRTKRLWFLWPDDNLRNKRSKNKCGCLGGCRFFGGTLTGLDFFKLEELTPSSSSAFSSTSAESDMFYGQSLLQPGEWIITKEIPKILDGKANGVKRKDWECRSMGIEIERKAQHLSLQVPLRSHSSSSSSEETSSSSAALPLLAGEKESPSSTTEDHLGQKEFLSGAKREDGHGSAAVEGGDGSPASPGNQERPVGQSPLRSPLKRQASVCSTRLGSTKSLSAAFYGDKQPVPVGVQFSSDVSRSDENVLDSPKQRRSFGSFPYTPSADSNSFHQYRSMDSSMSMADSEAYFSAAEEFEPISSDEGPGTYPGRKKRKKQAQKIEYSRGSIYHSVEGPLTSTIHGEISQDVKTLPIRTHPSQASFVSALGEDEHGENLYVMESDKTLETEQITSQQPVMACYQNYLTQFQVINWSVKHPTNKRTSKSSLHRPLDLDTPTSEESSSSFEQLSVPTFKMVKQGLTANSLLDRGMQLTGSTSNTPYTPLEKKSGENTDDETITEEWTLDHPVFQTRTTAIVEVKGTVDVVLTPLVAEALDRYIEAMVHCASSRHPAAIVDDLHCKVLRDAVQNSKTSFSENLSSKQDIRGTKIDGTTTGTTNQGPAQTNLSLKQDNVTIKGLQANVTVPKVNLCLLQASVDESPGVSSGKTVTHVSLVALCFDRIATQVRMNRGIVEETSNNAETGRNSVTFDRYIQTSKMQPQSSGSLRSNAGAEKGKEIAAKLNIHRVHGQLRGLDTTDIGTCAITAIPFGKSKVLFTLEELDEFAFVDETDQQAVPDVTRIGPSQEKWGWIMFECGIENLTIKGGRQSGAVLYNTFGVMGKSRDTERGGLLASNNSSDSPTGSGYNTDVSEDNLPCDRISPSSDINGNSVSDEQDEGVESDDLKKDIPLMPPPPDSCSMK…
SIO_010081: KIAA1109
subclass of: SO_0000673
so part of: KIAA1109
location: join(409096..409192,411636..411752,413030..413108,413766..413830,417118..417304,418452..418533,419115..419308,422224..422303,422696..422846,424658..424814,425528..425606,426378..426469,427327..427444,428523..428678,429654..429751,430718..430896,431038..431144,431897..432105,433755..433982,434554..434691,435354..435530,436170..436298,436553..436672,438030..438307,439068..439318,439789..440047,440465..441305,441717..441787,442271..442444,442707..442827,443431..443577,443869..443996,444398..444600,445164..445361,446122..446333,446661..446812,447502..447652,448747..448899,450007..450247,451380..451528,451810..452029,452801..452959,454141..454316,454804..454979,455592..456298,457625..457864,458249..458342,459817..459867,460362..460568,460721..460959,461498..461742,462377..462482,463213..463310,463553..463738,464142..464310,464852..465063,466137..466335,466848..466907,467951..468177,468678..468878,469093..469223,469673..469796,470199..470308,470785..470875,471245..471304,472865..473109,473413..473628,474363..474543,474757..474949,477103..477264,477376..477515,478511..478712,479105..479308,479425..479604,480724..480861,481196..481456,482532..482682,482851..483008,483506..483698,483890..484107,484750..485001,485553..485756,486933..487127,488025..488159,488754..488919,489916..490132)
location: region:409096-490132:1
so has part: feature:409096-409192:1:exon
so has part: feature:411636-411752:1:exon
so has part: feature:413030-413108:1:exon
so has part: feature:413766-413830:1:exon
so has part: feature:417118-417304:1:exon
so has part: feature:418452-418533:1:exon
so has part: feature:419115-419308:1:exon
so has part: feature:422224-422303:1:exon
so has part: feature:422696-422846:1:exon
so has part: feature:424658-424814:1:exon
so has part: feature:425528-425606:1:exon
so has part: feature:426378-426469:1:exon
so has part: feature:427327-427444:1:exon
so has part: feature:428523-428678:1:exon
so has part: feature:429654-429751:1:exon
so has part: feature:430718-430896:1:exon
so has part: feature:431038-431144:1:exon
so has part: feature:431897-432105:1:exon
so has part: feature:433755-433982:1:exon
so has part: feature:434554-434691:1:exon
so has part: feature:435354-435530:1:exon
so has part: feature:436170-436298:1:exon
so has part: feature:436553-436672:1:exon
so has part: feature:438030-438307:1:exon
so has part: feature:439068-439318:1:exon
so has part: feature:439789-440047:1:exon
so has part: feature:440465-441305:1:exon
so has part: feature:441717-441787:1:exon
so has part: feature:442271-442444:1:exon
so has part: feature:442707-442827:1:exon
so has part: feature:443431-443577:1:exon
so has part: feature:443869-443996:1:exon
so has part: feature:444398-444600:1:exon
so has part: feature:445164-445361:1:exon
so has part: feature:446122-446333:1:exon
so has part: feature:446661-446812:1:exon
so has part: feature:447502-447652:1:exon
so has part: feature:448747-448899:1:exon
so has part: feature:450007-450247:1:exon
so has part: feature:451380-451528:1:exon
so has part: feature:451810-452029:1:exon
so has part: feature:452801-452959:1:exon
so has part: feature:454141-454316:1:exon
so has part: feature:454804-454979:1:exon
so has part: feature:455592-456298:1:exon
so has part: feature:457625-457864:1:exon
so has part: feature:458249-458342:1:exon
so has part: feature:459817-459867:1:exon
so has part: feature:460362-460568:1:exon
so has part: feature:460721-460959:1:exon
so has part: feature:461498-461742:1:exon
so has part: feature:462377-462482:1:exon
so has part: feature:463213-463310:1:exon
so has part: feature:463553-463738:1:exon
so has part: feature:464142-464310:1:exon
so has part: feature:464852-465063:1:exon
so has part: feature:466137-466335:1:exon
so has part: feature:466848-466907:1:exon
so has part: feature:467951-468177:1:exon
so has part: feature:468678-468878:1:exon
so has part: feature:469093-469223:1:exon
so has part: feature:469673-469796:1:exon
so has part: feature:470199-470308:1:exon
so has part: feature:470785-470875:1:exon
so has part: feature:471245-471304:1:exon
so has part: feature:472865-473109:1:exon

XP_030306231.1
type: Protein
SIO_000068: ncbiprotein

position:409096:1
position: 409096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490132:1
position: 490132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409096-409192:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:411636-411752:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413030-413108:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:413766-413830:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:417118-417304:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:418452-418533:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:419115-419308:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:422224-422303:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:422696-422846:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:424658-424814:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:425528-425606:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:426378-426469:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:427327-427444:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:428523-428678:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:429654-429751:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:430718-430896:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:431038-431144:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:431897-432105:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:433755-433982:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:434554-434691:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:435354-435530:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:436170-436298:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:436553-436672:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:438030-438307:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:439068-439318:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:439789-440047:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:440465-441305:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:441717-441787:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:442271-442444:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:442707-442827:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:443431-443577:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:443869-443996:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:444398-444600:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:445164-445361:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:446122-446333:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:446661-446812:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:447502-447652:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:448747-448899:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:450007-450247:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:451380-451528:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:451810-452029:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:452801-452959:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:454141-454316:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:454804-454979:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:455592-456298:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:457625-457864:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:458249-458342:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:459817-459867:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:460362-460568:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:460721-460959:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:461498-461742:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:462377-462482:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:463213-463310:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:463553-463738:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:464142-464310:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:464852-465063:1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:466137-466335:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:466848-466907:1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:467951-468177:1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:468678-468878:1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:469093-469223:1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:469673-469796:1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:470199-470308:1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:470785-470875:1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:471245-471304:1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:472865-473109:1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:473413-473628:1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:474363-474543:1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:474757-474949:1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:477103-477264:1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:477376-477515:1:exon

urn:…
SIO_000300: 72
SIO_000628: feature:478511-478712:1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:479105-479308:1:exon

urn:…
SIO_000300: 74
SIO_000628: feature:479425-479604:1:exon

urn:…
SIO_000300: 75
SIO_000628: feature:480724-480861:1:exon

urn:…
SIO_000300: 76
SIO_000628: feature:481196-481456:1:exon

urn:…
SIO_000300: 77
SIO_000628: feature:482532-482682:1:exon

urn:…
SIO_000300: 78
SIO_000628: feature:482851-483008:1:exon

urn:…
SIO_000300: 79
SIO_000628: feature:483506-483698:1:exon

urn:…
SIO_000300: 80
SIO_000628: feature:483890-484107:1:exon

urn:…
SIO_000300: 81
SIO_000628: feature:484750-485001:1:exon

urn:…
SIO_000300: 82
SIO_000628: feature:485553-485756:1:exon

urn:…
SIO_000300: 83
SIO_000628: feature:486933-487127:1:exon

urn:…
SIO_000300: 84
SIO_000628: feature:488025-488159:1:exon

urn:…
SIO_000300: 85
SIO_000628: feature:488754-488919:1:exon

urn:…
SIO_000300: 86
SIO_000628: feature:489916-490132:1:exon

ADAD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ADAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 491399..500501
location: region:491399-500501:1
so has part: feature:491399-500501:1:exon
subclass of: SO_0000010

103537026
type: Gene
SIO_000068: ncbigene

position:491399:1
position: 491399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500501:1
position: 500501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491399-500501:1:exon

ADAD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ADAD1
product: adenosine deaminase domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 5% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030450882.1
SIO_010081: ADAD1
subclass of: SO_0000673
so part of: ADAD1
location: join(491399..491579,492406..492582,492987..493154,493690..493758,494278..494403,495368..495491,495693..495863,497418..497644,498935..499172,499692..499824,500388..500501)
location: region:491399-500501:1
so has part: feature:491399-491579:1:exon
so has part: feature:492406-492582:1:exon
so has part: feature:492987-493154:1:exon
so has part: feature:493690-493758:1:exon
so has part: feature:494278-494403:1:exon
so has part: feature:495368-495491:1:exon
so has part: feature:495693-495863:1:exon
so has part: feature:497418-497644:1:exon
so has part: feature:498935-499172:1:exon
so has part: feature:499692-499824:1:exon
so has part: feature:500388-500501:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:491399-491579:1:exon

position:491579:1
position: 491579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:492406-492582:1:exon

position:492406:1
position: 492406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492582:1
position: 492582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:492987-493154:1:exon

position:492987:1
position: 492987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493154:1
position: 493154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:493690-493758:1:exon

position:493690:1
position: 493690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493758:1
position: 493758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:494278-494403:1:exon

position:494278:1
position: 494278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494403:1
position: 494403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:495368-495491:1:exon

position:495368:1
position: 495368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495491:1
position: 495491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:495693-495863:1:exon

position:495693:1
position: 495693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495863:1
position: 495863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:497418-497644:1:exon

position:497418:1
position: 497418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497644:1
position: 497644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:498935-499172:1:exon

position:498935:1
position: 498935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499172:1
position: 499172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:499692-499824:1:exon

position:499692:1
position: 499692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499824:1
position: 499824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:500388-500501:1:exon

position:500388:1
position: 500388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ADAD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ADAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenosine deaminase domain-containing protein 1
translation: MASSNGKFQSAEIPTFDPPRKKTWLARGLGQQPLEKLPQSVRPKLPSLQRSSVLDPTQNPDTFLLQAACASPIPALSPTKGLEKLIATYERGEINPVLALHQFAQMQHKQLELKETALTGDIIRPYFAFSAIVDGIYFKTGLGKNKKESKRNAAKLALDELFHLEHRGTKASEKSDPPSVPADPQVAANSVQISRFCFEGRQCIYKKISESLAEVFNCLTSKYPEYQGCGSSLAAFIIEKGGQHEVVALGTGECNYSQYFQLSGRVVHDSHAIVIARRSLLRYFYRQLMLFYKENSSSTEKSIFCTAPGSKLLTLKQNLAIFLYMNQLPKGTAQLKSQVHLSPQSISAYEANENLSLHVAVEGKIYLTACCSPESVTASSMSASDKITKWEVVGVQGALLSHFIEPVYINSILVGNGNCRDIRGLDVAIKQRVDDALTSKLPMPYVVNRSHTYLVNAAHPVHVDLKQGSLSLNWSLSDASLEVVDGLNGKTTESSPFRSGMYMASRLCKAAMFSRFRLLAKAAECGDLIQFATYHEAKIQSELYQEAKSLLQSYLEQHSYGAWIVKSPHIEQFND
SIO_010081: ADAD1
subclass of: SO_0000673
so part of: ADAD1
location: join(491399..491579,492406..492582,492987..493154,493690..493758,494278..494403,495368..495491,495693..495863,497418..497644,498935..499172,499692..499824,500388..500501)
location: region:491399-500501:1
so has part: feature:491399-491579:1:exon
so has part: feature:492406-492582:1:exon
so has part: feature:492987-493154:1:exon
so has part: feature:493690-493758:1:exon
so has part: feature:494278-494403:1:exon
so has part: feature:495368-495491:1:exon
so has part: feature:495693-495863:1:exon
so has part: feature:497418-497644:1:exon
so has part: feature:498935-499172:1:exon
so has part: feature:499692-499824:1:exon
so has part: feature:500388-500501:1:exon

XP_030306742.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:491399-491579:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:492406-492582:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:492987-493154:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:493690-493758:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:494278-494403:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:495368-495491:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:495693-495863:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:497418-497644:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:498935-499172:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:499692-499824:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:500388-500501:1:exon

LOC103537024
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC103537024
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(548485..552027)
location: region:548485-552027:-1
so has part: feature:548485-552027:-1:exon
subclass of: SO_0000010

103537024
type: Gene
SIO_000068: ncbigene

position:548485:-1
position: 548485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552027:-1
position: 552027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548485-552027:-1:exon

LOC103537024
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LOC103537024
product: caltractin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 long SRA read, 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_030450622.1
SIO_010081: LOC103537024
subclass of: SO_0000673
so part of: LOC103537024
location: complement(join(548485..549138,549375..549512,549623..549751,550294..550449,551970..552027))
location: region:548485-552027:-1
so has part: feature:551970-552027:-1:exon
so has part: feature:550294-550449:-1:exon
so has part: feature:549623-549751:-1:exon
so has part: feature:549375-549512:-1:exon
so has part: feature:548485-549138:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:551970-552027:-1:exon

position:551970:-1
position: 551970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:550294-550449:-1:exon

position:550294:-1
position: 550294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550449:-1
position: 550449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:549623-549751:-1:exon

position:549623:-1
position: 549623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549751:-1
position: 549751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:549375-549512:-1:exon

position:549375:-1
position: 549375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549512:-1
position: 549512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:548485-549138:-1:exon

position:549138:-1
position: 549138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC103537024
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LOC103537024
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caltractin
translation: MASSYKKPGLHKTLRKKSGLKPELTEEQKQEIREAFDLFDTDGSGSIDIKELKVAMRALGFEPKKEEIKKMIADVDKDGNGTIDFEDFLAMMTQKMSEKDSKEEILKAFRLFDDDGTGKISFKNLKRVAKELGEDLTDEELQEMIDEADRDGDGEVNEQEFLRIMKKTSLY
SIO_010081: LOC103537024
subclass of: SO_0000673
so part of: LOC103537024
location: complement(join(549049..549138,549375..549512,549623..549751,550294..550449,551970..551972))
location: region:549049-551972:-1
so has part: feature:551970-551972:-1:exon
so has part: feature:550294-550449:-1:exon
so has part: feature:549623-549751:-1:exon
so has part: feature:549375-549512:-1:exon
so has part: feature:549049-549138:-1:exon

XP_030306482.1
type: Protein
SIO_000068: ncbiprotein

position:549049:-1
position: 549049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551972:-1
position: 551972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:551970-551972:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:550294-550449:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:549623-549751:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:549375-549512:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:549049-549138:-1:exon

BBS12
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: BBS12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 552211..555446
location: region:552211-555446:1
so has part: feature:552211-555446:1:exon
subclass of: SO_0000010

103537023
type: Gene
SIO_000068: ncbigene

position:552211:1
position: 552211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555446:1
position: 555446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552211-555446:1:exon

BBS12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: BBS12
product: Bardet-Biedl syndrome 12, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030450671.1
SIO_010081: BBS12
subclass of: SO_0000673
so part of: BBS12
location: join(552211..552461,553300..555446)
location: region:552211-555446:1
so has part: feature:552211-552461:1:exon
so has part: feature:553300-555446:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:552211-552461:1:exon

position:552461:1
position: 552461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:553300-555446:1:exon

position:553300:1
position: 553300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BBS12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: BBS12
product: Bardet-Biedl syndrome 12, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030450672.1
SIO_010081: BBS12
subclass of: SO_0000673
so part of: BBS12
location: join(552494..552571,553300..555446)
location: region:552494-555446:1
so has part: feature:552494-552571:1:exon
so has part: feature:553300-555446:1:exon

position:552494:1
position: 552494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552494-552571:1:exon

position:552571:1
position: 552571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:553300-555446:1:exon

BBS12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: BBS12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Bardet-Biedl syndrome 12 protein
translation: MAFRDVNARRHIGLQQLSSLALAGRTLLGPVKSCKFIVDESTNQSTLICSAVRLIESLDLTSAAGQLLNETIQAQNKEFRTGMTTLLFLVGAWSNAVLECLQQNVPVSAVVTVMSEGLNSCCERVQCLQISIHDVSKEQCSGSVSPNAFKTCQIGHDSLLNPQIFFCFPKDFSAPEEAIPINSCSSQDDGCNFNKCLVSPLANEIASLFKPSGDKSTSVASGSSVSTSSCNRQKLSHSRYFSIPGKSQISSQQGNFQGSFSGQSSDACECSGLGQLAVSLSHGNQTGMKLLQSIVVRQQERAECSGSSQFNIAEIVTCCLLGLPESYSCVAPGFVTLVSPEQATVIKDFEGKPLQILLMDGDLTEQYRHLGFNRPCNVRTILEHPSLQEGKTGDLWLSSMLDILINFEVNLVLVKGNVCKNLMARCISNSILVIGSVTQDVLCAFGQASSARPVTYLTQPNASCVGSRAQVELWKACDGRAMDLGELVPVRINVQGIHLFTAVLTTTVASKLQLIEDQFWTSVYRLHHALNDERVFLGGGAVELLCLSHIQTLAEQPLQAANKNAVKELRRPGLAASVAEYRPVVLQALASGWKQYLSVLMCNTAKAASELEACTSVEHHLRKAADCGSPSAYIFQEFRRGNLLRDGSDLLANHGEVLKIYDNVTAKTEAWRRALDLVLLVLQTDAEIITGPKKKQLLNSKASSEFMFL
SIO_010081: BBS12
subclass of: SO_0000673
so part of: BBS12
location: 553317..555446
location: region:553317-555446:1
so has part: feature:553317-555446:1:exon

XP_030306531.1
type: Protein
SIO_000068: ncbiprotein

position:553317:1
position: 553317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553317-555446:1:exon

BBS12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: BBS12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Bardet-Biedl syndrome 12 protein
translation: MAFRDVNARRHIGLQQLSSLALAGRTLLGPVKSCKFIVDESTNQSTLICSAVRLIESLDLTSAAGQLLNETIQAQNKEFRTGMTTLLFLVGAWSNAVLECLQQNVPVSAVVTVMSEGLNSCCERVQCLQISIHDVSKEQCSGSVSPNAFKTCQIGHDSLLNPQIFFCFPKDFSAPEEAIPINSCSSQDDGCNFNKCLVSPLANEIASLFKPSGDKSTSVASGSSVSTSSCNRQKLSHSRYFSIPGKSQISSQQGNFQGSFSGQSSDACECSGLGQLAVSLSHGNQTGMKLLQSIVVRQQERAECSGSSQFNIAEIVTCCLLGLPESYSCVAPGFVTLVSPEQATVIKDFEGKPLQILLMDGDLTEQYRHLGFNRPCNVRTILEHPSLQEGKTGDLWLSSMLDILINFEVNLVLVKGNVCKNLMARCISNSILVIGSVTQDVLCAFGQASSARPVTYLTQPNASCVGSRAQVELWKACDGRAMDLGELVPVRINVQGIHLFTAVLTTTVASKLQLIEDQFWTSVYRLHHALNDERVFLGGGAVELLCLSHIQTLAEQPLQAANKNAVKELRRPGLAASVAEYRPVVLQALASGWKQYLSVLMCNTAKAASELEACTSVEHHLRKAADCGSPSAYIFQEFRRGNLLRDGSDLLANHGEVLKIYDNVTAKTEAWRRALDLVLLVLQTDAEIITGPKKKQLLNSKASSEFMFL
SIO_010081: BBS12
subclass of: SO_0000673
so part of: BBS12
location: 553317..555446
location: region:553317-555446:1
so has part: feature:553317-555446:1:exon

XP_030306532.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:553317-555446:1:exon

FGF2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: FGF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 577920..594511
location: region:577920-594511:1
so has part: feature:577920-594511:1:exon
subclass of: SO_0000010

103537022
type: Gene
SIO_000068: ncbigene

position:577920:1
position: 577920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594511:1
position: 594511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577920-594511:1:exon

FGF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FGF2
product: fibroblast growth factor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 14 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030450449.1
SIO_010081: FGF2
subclass of: SO_0000673
so part of: FGF2
location: join(577920..578185,591758..591861,594253..594511)
location: region:577920-594511:1
so has part: feature:577920-578185:1:exon
so has part: feature:591758-591861:1:exon
so has part: feature:594253-594511:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:577920-578185:1:exon

position:578185:1
position: 578185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:591758-591861:1:exon

position:591758:1
position: 591758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591861:1
position: 591861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:594253-594511:1:exon

position:594253:1
position: 594253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FGF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 2
translation: MAAAGSITTLPDDGGSGAAFPPGHFKDPKRLYCKNGGFFLRINPDGRVDGVREKSDPHIKLQLQAEERGVVSIKGVSANRFLAMKEDGRLLALKCATEECFFFERLESNNYNTYRSRKYSDWYVALKRTGQYKPGPKTGPGQKAILFLPMSAKS
SIO_010081: FGF2
subclass of: SO_0000673
so part of: FGF2
location: join(578011..578185,591758..591861,594253..594438)
location: region:578011-594438:1
so has part: feature:578011-578185:1:exon
so has part: feature:591758-591861:1:exon
so has part: feature:594253-594438:1:exon

XP_030306309.1
type: Protein
SIO_000068: ncbiprotein

position:578011:1
position: 578011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594438:1
position: 594438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578011-578185:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:591758-591861:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:594253-594438:1:exon

NUDT6
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: NUDT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(594606..607505)
location: region:594606-607505:-1
so has part: feature:594606-607505:-1:exon
subclass of: SO_0000010

103537021
type: Gene
SIO_000068: ncbigene

position:594606:-1
position: 594606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607505:-1
position: 607505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:594606-607505:-1:exon

NUDT6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NUDT6
product: nudix hydrolase 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_030450447.1
SIO_010081: NUDT6
subclass of: SO_0000673
so part of: NUDT6
location: complement(join(594606..595335,598741..598795,601697..601752,606219..606422,607304..607505))
location: region:594606-607505:-1
so has part: feature:607304-607505:-1:exon
so has part: feature:606219-606422:-1:exon
so has part: feature:601697-601752:-1:exon
so has part: feature:598741-598795:-1:exon
so has part: feature:594606-595335:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:607304-607505:-1:exon

position:607304:-1
position: 607304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:606219-606422:-1:exon

position:606219:-1
position: 606219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606422:-1
position: 606422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:601697-601752:-1:exon

position:601697:-1
position: 601697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601752:-1
position: 601752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:598741-598795:-1:exon

position:598741:-1
position: 598741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598795:-1
position: 598795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:594606-595335:-1:exon

position:595335:-1
position: 595335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NUDT6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NUDT6
product: nudix hydrolase 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030450448.1
SIO_010081: NUDT6
subclass of: SO_0000673
so part of: NUDT6
location: complement(join(594606..595335,598741..598795,601697..601752,606219..606422,607231..607451))
location: region:594606-607451:-1
so has part: feature:607231-607451:-1:exon
so has part: feature:606219-606422:-1:exon
so has part: feature:601697-601752:-1:exon
so has part: feature:598741-598795:-1:exon
so has part: feature:594606-595335:-1:exon

position:607451:-1
position: 607451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:607231-607451:-1:exon

position:607231:-1
position: 607231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:606219-606422:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:601697-601752:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:598741-598795:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:594606-595335:-1:exon

NUDT6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NUDT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleoside diphosphate-linked moiety X motif 6 isoform X1
translation: MLPRRLPASGSGSRGRSPPGGGGFRLPAALAPHCSPQRHEEVLAGAAPDSALRDPNGAAGAAGQVRGGAVRRWRREGRTAAWIHLPILRSSLAAAAASQGFAFHHAEQGSSTLTLWLGEGPSRLPGYATHQLGVAGAVLDESTGKVLVVQDRNRTLNAWKFPGGLADPGEDIGDTAVREVFEETGIKSEFKSILSIRQQHQHPGAFGKSDMYIICRLEPSSFNITLCQQECLRCEWMDLGELARTKDTTPITSNVAKLLLYGYQEGFDKIDITMREFPAVYTGLFYKLYHRELPESYQNIT
SIO_010081: NUDT6
subclass of: SO_0000673
so part of: NUDT6
location: complement(join(594947..595335,598741..598795,601697..601752,606219..606422,607304..607505))
location: region:594947-607505:-1
so has part: feature:607304-607505:-1:exon
so has part: feature:606219-606422:-1:exon
so has part: feature:601697-601752:-1:exon
so has part: feature:598741-598795:-1:exon
so has part: feature:594947-595335:-1:exon

XP_030306307.1
type: Protein
SIO_000068: ncbiprotein

position:594947:-1
position: 594947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:607304-607505:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:606219-606422:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:601697-601752:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:598741-598795:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:594947-595335:-1:exon

NUDT6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NUDT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleoside diphosphate-linked moiety X motif 6 isoform X2
translation: MRRFWRALRRTRRCGTLTGLQERPDKFGGVSVDLGELSHPLRLEPTVFGRWLQGAVRRWRREGRTAAWIHLPILRSSLAAAAASQGFAFHHAEQGSSTLTLWLGEGPSRLPGYATHQLGVAGAVLDESTGKVLVVQDRNRTLNAWKFPGGLADPGEDIGDTAVREVFEETGIKSEFKSILSIRQQHQHPGAFGKSDMYIICRLEPSSFNITLCQQECLRCEWMDLGELARTKDTTPITSNVAKLLLYGYQEGFDKIDITMREFPAVYTGLFYKLYHRELPESYQNIT
SIO_010081: NUDT6
subclass of: SO_0000673
so part of: NUDT6
location: complement(join(594947..595335,598741..598795,601697..601752,606219..606422,607231..607390))
location: region:594947-607390:-1
so has part: feature:607231-607390:-1:exon
so has part: feature:606219-606422:-1:exon
so has part: feature:601697-601752:-1:exon
so has part: feature:598741-598795:-1:exon
so has part: feature:594947-595335:-1:exon

XP_030306308.1
type: Protein
SIO_000068: ncbiprotein

position:607390:-1
position: 607390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:607231-607390:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:606219-606422:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:601697-601752:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:598741-598795:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:594947-595335:-1:exon

SPATA5
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SPATA5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 607455..747698
location: region:607455-747698:1
so has part: feature:607455-747698:1:exon
subclass of: SO_0000010

103537020
type: Gene
SIO_000068: ncbigene

position:607455:1
position: 607455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:747698:1
position: 747698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:607455-747698:1:exon

SPATA5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SPATA5
product: spermatogenesis associated 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030450446.1
SIO_010081: SPATA5
subclass of: SO_0000673
so part of: SPATA5
location: join(607455..607636,607979..608103,608733..608890,610314..610372,611147..611761,613998..614127,614749..614805,615640..615763,617096..617351,625074..625228,631170..631379,641020..641073,641501..641580,652853..652979,714693..714857,747442..747698)
location: region:607455-747698:1
so has part: feature:607455-607636:1:exon
so has part: feature:607979-608103:1:exon
so has part: feature:608733-608890:1:exon
so has part: feature:610314-610372:1:exon
so has part: feature:611147-611761:1:exon
so has part: feature:613998-614127:1:exon
so has part: feature:614749-614805:1:exon
so has part: feature:615640-615763:1:exon
so has part: feature:617096-617351:1:exon
so has part: feature:625074-625228:1:exon
so has part: feature:631170-631379:1:exon
so has part: feature:641020-641073:1:exon
so has part: feature:641501-641580:1:exon
so has part: feature:652853-652979:1:exon
so has part: feature:714693-714857:1:exon
so has part: feature:747442-747698:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:607455-607636:1:exon

position:607636:1
position: 607636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:607979-608103:1:exon

position:607979:1
position: 607979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608103:1
position: 608103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:608733-608890:1:exon

position:608733:1
position: 608733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608890:1
position: 608890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:610314-610372:1:exon

position:610314:1
position: 610314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:610372:1
position: 610372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:611147-611761:1:exon

position:611147:1
position: 611147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611761:1
position: 611761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:613998-614127:1:exon

position:613998:1
position: 613998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614127:1
position: 614127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:614749-614805:1:exon

position:614749:1
position: 614749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614805:1
position: 614805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:615640-615763:1:exon

position:615640:1
position: 615640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615763:1
position: 615763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:617096-617351:1:exon

position:617096:1
position: 617096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:617351:1
position: 617351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:625074-625228:1:exon

position:625074:1
position: 625074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:625228:1
position: 625228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:631170-631379:1:exon

position:631170:1
position: 631170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631379:1
position: 631379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:641020-641073:1:exon

position:641020:1
position: 641020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:641073:1
position: 641073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:641501-641580:1:exon

position:641501:1
position: 641501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:641580:1
position: 641580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:652853-652979:1:exon

position:652853:1
position: 652853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:652979:1
position: 652979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:714693-714857:1:exon

position:714693:1
position: 714693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:714857:1
position: 714857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:747442-747698:1:exon

position:747442:1
position: 747442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPATA5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SPATA5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATPase family protein 2 homolog
translation: MSASSRRKSRGRPVPGGGVSPRAAPPGAGEGELLAVGVVEAVEAGDDKVPKMLRRALAQLSLSSMKSARLCIGRPALLSSASGRQEVCTAWPTTGFPGGKIGLSESTRKNLKVHPGDVVTVQPVTGAVIQAEEVTVKLRDRDATVNAEEMSVCLLRNLEGKVVLPGNLLAFTFYGKLCNIVVMKVKGTDGAELIAQHSAIPSDMHEPDLERSDLETSTLDLSLQFSKMDVDASPELTTMSTPSKAEDPSSPVTPSSGVAAGGQDSAQGDGADLAHDWEPSGKGGSEELPLTGNSGAISNTDTFYFISSRTRINFIETRTSASEDGDCESRVTYDMIGGLSSQLRTIRETVELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIAKAIANEVGAHVTVINGPEIISKFYGESESRLRQIFAEASLCRPSIIFIDELDALCPKREGAQNEVEKRVVASLLTLMDGIGSEESEGQVLVLGATNRAHALDAALRRPGRFDKEIEIGIPDARGRLDILQRLLRKVPHSLTAAQLVRLADSAHGYVGADLAALCKEAGLYALRRALGKSPNLSDKEVAGSVMIAFNDFLQGMNDVRPSAMREVAVDVPKVSWSDIGGLEDIKLKLKQAVEWPLRHPDSFIRMGIQPPKGVLLYGPPGCSKTMIAKALAHESGLNFLAVKGPELMNKYVGESERAVREIFRKARAVSPSILFFDEIDALAVERGNSSGAGSVSDRVLAQLLTEMDGMEQLKDVTVLAATNRPDMIDKALLRPGRIDRIIYVPLPDAATRGEIFKLHFQSMPISDEVCLAELVQRTQKYSGAEITAVCREAALLALQEDIDARSVLGRHFGTALTVVTPRIPDSLIQFYAEYQQQSGLHAL
SIO_010081: SPATA5
subclass of: SO_0000673
so part of: SPATA5
location: join(607504..607636,607979..608103,608733..608890,610314..610372,611147..611761,613998..614127,614749..614805,615640..615763,617096..617351,625074..625228,631170..631379,641020..641073,641501..641580,652853..652979,714693..714857,747442..747618)
location: region:607504-747618:1
so has part: feature:607504-607636:1:exon
so has part: feature:607979-608103:1:exon
so has part: feature:608733-608890:1:exon
so has part: feature:610314-610372:1:exon
so has part: feature:611147-611761:1:exon
so has part: feature:613998-614127:1:exon
so has part: feature:614749-614805:1:exon
so has part: feature:615640-615763:1:exon
so has part: feature:617096-617351:1:exon
so has part: feature:625074-625228:1:exon
so has part: feature:631170-631379:1:exon
so has part: feature:641020-641073:1:exon
so has part: feature:641501-641580:1:exon
so has part: feature:652853-652979:1:exon
so has part: feature:714693-714857:1:exon
so has part: feature:747442-747618:1:exon

XP_030306306.1
type: Protein
SIO_000068: ncbiprotein

position:607504:1
position: 607504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:747618:1
position: 747618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:607504-607636:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:607979-608103:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:608733-608890:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:610314-610372:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:611147-611761:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:613998-614127:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:614749-614805:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:615640-615763:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:617096-617351:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:625074-625228:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:631170-631379:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:641020-641073:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:641501-641580:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:652853-652979:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:714693-714857:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:747442-747618:1:exon

SPRY1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SPRY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 760533..767106
location: region:760533-767106:1
so has part: feature:760533-767106:1:exon
subclass of: SO_0000010

103537003
type: Gene
SIO_000068: ncbigene

position:760533:1
position: 760533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:767106:1
position: 767106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:760533-767106:1:exon

SPRY1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SPRY1
product: sprouty RTK signaling antagonist 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 long SRA read, 23 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030450689.1
SIO_010081: SPRY1
subclass of: SO_0000673
so part of: SPRY1
location: join(760533..760673,761378..762061,764829..767106)
location: region:760533-767106:1
so has part: feature:760533-760673:1:exon
so has part: feature:761378-762061:1:exon
so has part: feature:764829-767106:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:760533-760673:1:exon

position:760673:1
position: 760673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:761378-762061:1:exon

position:761378:1
position: 761378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:762061:1
position: 762061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:764829-767106:1:exon

position:764829:1
position: 764829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPRY1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SPRY1
product: sprouty RTK signaling antagonist 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_030450691.1
SIO_010081: SPRY1
subclass of: SO_0000673
so part of: SPRY1
location: join(760553..760673,764829..767106)
location: region:760553-767106:1
so has part: feature:760553-760673:1:exon
so has part: feature:764829-767106:1:exon

position:760553:1
position: 760553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:760553-760673:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:764829-767106:1:exon

SPRY1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SPRY1
product: sprouty RTK signaling antagonist 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030450690.1
SIO_010081: SPRY1
subclass of: SO_0000673
so part of: SPRY1
location: join(762789..762945,764829..767106)
location: region:762789-767106:1
so has part: feature:762789-762945:1:exon
so has part: feature:764829-767106:1:exon

position:762789:1
position: 762789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:762789-762945:1:exon

position:762945:1
position: 762945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:764829-767106:1:exon

SPRY1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SPRY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein sprouty homolog 1
translation: MEPQSPHGSGGSLAVVIQQPSLDSRQRLDYERESQPTTILSLDQIKAIRGSNEYTEGPSVVKKPGPRTAPRQEKHERTHEIIPINVNNNYEHRPSHVGHVAHQHNTRAPVLSRSTSTGSAASSGSSSSASSEQGLLGRSPPSRPGSGHRSERTVRTQPKQSSLVADDLKGPLKEDPTQHKFICEQCGKCKCGECTAPRALPSCLACNRQCLCSAESMVEYGTCMCLVKGIFYHCSNDDEGDSYADNPCSCSQSHCCSRYLCMGAMSLLLPCLLCYPPAKGCLKLCRGCYDRVHRPGCRCKNSNTVYCKLESCPSRGQGKPS
SIO_010081: SPRY1
subclass of: SO_0000673
so part of: SPRY1
location: 764884..765849
location: region:764884-765849:1
so has part: feature:764884-765849:1:exon

XP_030306549.1
type: Protein
SIO_000068: ncbiprotein

position:764884:1
position: 764884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:765849:1
position: 765849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:764884-765849:1:exon

SPRY1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SPRY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein sprouty homolog 1
translation: MEPQSPHGSGGSLAVVIQQPSLDSRQRLDYERESQPTTILSLDQIKAIRGSNEYTEGPSVVKKPGPRTAPRQEKHERTHEIIPINVNNNYEHRPSHVGHVAHQHNTRAPVLSRSTSTGSAASSGSSSSASSEQGLLGRSPPSRPGSGHRSERTVRTQPKQSSLVADDLKGPLKEDPTQHKFICEQCGKCKCGECTAPRALPSCLACNRQCLCSAESMVEYGTCMCLVKGIFYHCSNDDEGDSYADNPCSCSQSHCCSRYLCMGAMSLLLPCLLCYPPAKGCLKLCRGCYDRVHRPGCRCKNSNTVYCKLESCPSRGQGKPS
SIO_010081: SPRY1
subclass of: SO_0000673
so part of: SPRY1
location: 764884..765849
location: region:764884-765849:1
so has part: feature:764884-765849:1:exon

XP_030306550.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:764884-765849:1:exon

SPRY1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SPRY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein sprouty homolog 1
translation: MEPQSPHGSGGSLAVVIQQPSLDSRQRLDYERESQPTTILSLDQIKAIRGSNEYTEGPSVVKKPGPRTAPRQEKHERTHEIIPINVNNNYEHRPSHVGHVAHQHNTRAPVLSRSTSTGSAASSGSSSSASSEQGLLGRSPPSRPGSGHRSERTVRTQPKQSSLVADDLKGPLKEDPTQHKFICEQCGKCKCGECTAPRALPSCLACNRQCLCSAESMVEYGTCMCLVKGIFYHCSNDDEGDSYADNPCSCSQSHCCSRYLCMGAMSLLLPCLLCYPPAKGCLKLCRGCYDRVHRPGCRCKNSNTVYCKLESCPSRGQGKPS
SIO_010081: SPRY1
subclass of: SO_0000673
so part of: SPRY1
location: 764884..765849
location: region:764884-765849:1
so has part: feature:764884-765849:1:exon

XP_030306551.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:764884-765849:1:exon

ANKRD50
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ANKRD50
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1065706..1097400)
location: region:1065706-1097400:-1
so has part: feature:1065706-1097400:-1:exon
subclass of: SO_0000010

103537002
type: Gene
SIO_000068: ncbigene

position:1065706:-1
position: 1065706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1097400:-1
position: 1097400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1065706-1097400:-1:exon

ANKRD50
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ANKRD50
product: ankyrin repeat domain 50
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 8 ESTs, 1 long SRA read, 27 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030450725.1
SIO_010081: ANKRD50
subclass of: SO_0000673
so part of: ANKRD50
location: complement(join(1065706..1068930,1071097..1074644,1078867..1079096,1094989..1096263,1097306..1097400))
location: region:1065706-1097400:-1
so has part: feature:1097306-1097400:-1:exon
so has part: feature:1094989-1096263:-1:exon
so has part: feature:1078867-1079096:-1:exon
so has part: feature:1071097-1074644:-1:exon
so has part: feature:1065706-1068930:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1097306-1097400:-1:exon

position:1097306:-1
position: 1097306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1094989-1096263:-1:exon

position:1094989:-1
position: 1094989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1096263:-1
position: 1096263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1078867-1079096:-1:exon

position:1078867:-1
position: 1078867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1079096:-1
position: 1079096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1071097-1074644:-1:exon

position:1071097:-1
position: 1071097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1074644:-1
position: 1074644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1065706-1068930:-1:exon

position:1068930:-1
position: 1068930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANKRD50
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ANKRD50
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat domain-containing protein 50
translation: MAQTSLLQGKPFYCREWVFHKLQHCLQEKANCSSGAANKPSLVVNSGSNTSVISGRGAAWGVLLVGGPGSGKTALCTELLWPSSPGNLQRALHRQALAFHFCRAQDSDTLCVGGFIRGLVAQICRSGLIQGYEDKLRDPAIQSLLQPGECERNPAEAFKRCILLPLLGMKPPQQSLFLLVDSVDEGCNLSEGEHTGPSLAGTIAELLAAHFEFFPPWLLLLCSARKQSKAVTKMFTGFRKISLDDLRKAYIVKDVQQYILHRLDQEEALRQHLTKETAEMLNQLHIKSSGCFLYLERVLDGVVENFIMLREIRDIPGTLNGLYLWLCQRLFVRKQFAKVQPILNVILAACRPLTTTELYHAVWTKNMTLTMEDFQRKLDVLSKVLVDGLGNTKILFHYSFAEWLLDVKHCTQKYLCNAAEGHRMLAMSYTCRAKDLTPLEAQEFALHLINSNLQLETSELALWMIWNGTPVKDSLSTVIPKEQEVLQLLVKAGAHVNSEDDRTSCIVRQALEREDSIRTLLDNGASVNQCDPNGRTLLANAAYSGNLDVVNLLVSRGADLEIEDAHGQTALTLAARQGHTKVVNCLIGCGANVNHTDHDGWTALRSAAWGGHTEVVSALLYAGVKVDCADADSRTALRAAAWGGHEDIVLNLLQHGAEVNKADNEGRTALIAAAYMGHKEIVEHLLDHGAEVNHEDVDGRTALSVAALCVPASKGHASVVSLLIDRGAEVDHCDKDGMTPLLVAAYEGHVDVVDLLLEGGADVDHTDNNGRTPLLAAASMGHASVVNTLLFWGAAVDSIDSEGRTVLSIASAQGNVEVVRTLLDRGLDENHRDDAGWTPLHMAAFEGHRLICEALIEQGARTNEIDNDGRIPFILAAQEGHYDCVQILLENKSNVDHRGYDGRNALRVAALEGHRDIVELLLSHGADVNYKDADGRPTLYILALENQLTMAEYFLENGANVEASDAEGRTALHVSCWQGHLEMVQVLITYHADVNAADNEKRSALQSAAWQGHVKVVQLLIEHGALVDHTCNQGATGLCIAAQEGHIDVVQILLEHGADPNHADQFGRTAMRVAAKNGHSQIIKLLEKYGASTLNGCTPSPVHTMEQKPLQSVPSKMQSLTMKSNSSGSTGGDMQPSMRGLSNGPAHAFSSPSESPDSTVDRQKSSLSNNSLKSSKNSSLRTTSSTATAQTVPIDSFHSLSFTEQIQQHSLPRSRSRQSVVSPSSTTHSLSHNHNSPSSEFEWSQVKPSLKSTKTNKGGKTDNSSKSGSAGKKIKQSSSSQPKVLEYEMTQLDKRVPIAKSGTSVQGKSMPPEPQCKILVPPAQQEIGRSQQQFLIHQQSGEQKKRNGIMTNPNYHLQSNQVFLGRVSVPRTVQDRGHQEVLEGYPPAETELSLKQALKLQIEGSDPSFNYKKETPL
SIO_010081: ANKRD50
subclass of: SO_0000673
so part of: ANKRD50
location: complement(join(1071100..1074644,1078867..1079096,1094989..1095467))
location: region:1071100-1095467:-1
so has part: feature:1094989-1095467:-1:exon
so has part: feature:1078867-1079096:-1:exon
so has part: feature:1071100-1074644:-1:exon

XP_030306585.1
type: Protein
SIO_000068: ncbiprotein

position:1071100:-1
position: 1071100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1095467:-1
position: 1095467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1094989-1095467:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1078867-1079096:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1071100-1074644:-1:exon

FAT4
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: FAT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1240574..1348577
location: region:1240574-1348577:1
so has part: feature:1240574-1348577:1:exon
subclass of: SO_0000010

103537019
type: Gene
SIO_000068: ncbigene

position:1240574:1
position: 1240574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1348577:1
position: 1348577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1240574-1348577:1:exon

FAT4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: FAT4
product: FAT atypical cadherin 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 21 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030450675.1
SIO_010081: FAT4
subclass of: SO_0000673
so part of: FAT4
location: join(1240574..1245856,1291582..1291713,1293472..1293733,1296183..1296533,1300840..1301765,1302735..1302909,1313917..1314097,1317005..1317255,1320187..1324536,1330089..1330193,1331704..1332011,1335887..1335972,1337356..1337535,1338396..1338520,1339605..1339813,1344053..1344314,1346064..1348577)
location: region:1240574-1348577:1
so has part: feature:1240574-1245856:1:exon
so has part: feature:1291582-1291713:1:exon
so has part: feature:1293472-1293733:1:exon
so has part: feature:1296183-1296533:1:exon
so has part: feature:1300840-1301765:1:exon
so has part: feature:1302735-1302909:1:exon
so has part: feature:1313917-1314097:1:exon
so has part: feature:1317005-1317255:1:exon
so has part: feature:1320187-1324536:1:exon
so has part: feature:1330089-1330193:1:exon
so has part: feature:1331704-1332011:1:exon
so has part: feature:1335887-1335972:1:exon
so has part: feature:1337356-1337535:1:exon
so has part: feature:1338396-1338520:1:exon
so has part: feature:1339605-1339813:1:exon
so has part: feature:1344053-1344314:1:exon
so has part: feature:1346064-1348577:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1240574-1245856:1:exon

position:1245856:1
position: 1245856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1291582-1291713:1:exon

position:1291582:1
position: 1291582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1291713:1
position: 1291713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1293472-1293733:1:exon

position:1293472:1
position: 1293472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1293733:1
position: 1293733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1296183-1296533:1:exon

position:1296183:1
position: 1296183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1296533:1
position: 1296533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1300840-1301765:1:exon

position:1300840:1
position: 1300840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1301765:1
position: 1301765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1302735-1302909:1:exon

position:1302735:1
position: 1302735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1302909:1
position: 1302909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1313917-1314097:1:exon

position:1313917:1
position: 1313917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1314097:1
position: 1314097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1317005-1317255:1:exon

position:1317005:1
position: 1317005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1317255:1
position: 1317255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1320187-1324536:1:exon

position:1320187:1
position: 1320187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1324536:1
position: 1324536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1330089-1330193:1:exon

position:1330089:1
position: 1330089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1330193:1
position: 1330193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1331704-1332011:1:exon

position:1331704:1
position: 1331704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1332011:1
position: 1332011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1335887-1335972:1:exon

position:1335887:1
position: 1335887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1335972:1
position: 1335972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1337356-1337535:1:exon

position:1337356:1
position: 1337356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1337535:1
position: 1337535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1338396-1338520:1:exon

position:1338396:1
position: 1338396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1338520:1
position: 1338520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1339605-1339813:1:exon

position:1339605:1
position: 1339605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1339813:1
position: 1339813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1344053-1344314:1:exon

position:1344053:1
position: 1344053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1344314:1
position: 1344314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1346064-1348577:1:exon

position:1346064:1
position: 1346064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FAT4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: FAT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin Fat 4
translation: MGRPPALRRTPPLLPLLLLLLPPLGAAAAAEPRQVFQVLEEQPAGTWVGTIATRPGFTYRLSEHHALFAINGTSGALHTRATIDRESLASDVVDLVVLSSQPTYPSEVRVLVLDINDNAPVFPDPSIMVTFKEDTGSGRQLILDTATDADSGTNGVDHNSYRIVSGNEEGRFRLNITLNPSGEGAFLHLVSRGGLDREATATYQLLVQVEDKGEPRLRGYLQVNVTIQDINDNPPIFSQTLYQARVPEDAPVGASVLQVAAADADEGTNADIRYRLEGGDGGGGEGAGSLPFEVDPESGVIRIRERLDYELRQQYSLTVQATDRGVPALSGRAEALIRLLDVNDNEPRVKFRYFPATSRFASVDENAAPGTVVALLTVSDADSPAANGNISVSILAGNEQRHFEVHSSKVPNLSLIKVAAALDRERIPAYNLTVAVADNYGAPPPPPGTPPSSLSPDGVAAAPVSRSSVASLVIFVNDINDHPPVFEQSVYRANISEEVPLGSYVRGLSATDRDSGLNANLKYSIVSGNELGWFRISEHSGLVTTASPQGGTSGHASGTSVSSGLDRETASQVVLNISARDQGVQPKFSYAQLVVTILDVNDNKPRFSQPEGYRVSLAENSPSGTEILVLSATDGDQGDNGTVRFSLQEAEPVLAAVGPSSVSPRQIFRLDPVSGKLSTISQLDREEQAHFSLQVLATDLGSPPLSSVAYVNVSLLDVNDNSPVFYPVQYFAHIQENEPAETYVTTVSATDPDLGPNGTVKYSISAGDISRFQVHGETGVITTKIALDREEKTAYQLQIVATDGGHLQSQNQAIVTITVLDTQDNPPVFSQSIYSFVVFENVALGYHVGTVSASTMDLNTNISYLITTGDQRGVFAINRVTGQITTASIIDREEQAFYQLKVVASGGAITGDAMVNITVKDLNDNSPHFIHVVESVNVVENWKAGHTIFQAKAFDPDEGVNGVVLYSLKQNPKGLFAIDEQTGAVSLTGPLDINAGSYQVEILASDMGVPQLSSNFILTVSVHDVNDNPPVFDQLSYEITILESEPVNSRFFKVQASDKDSGVNGEIAYSIREGNTGDAFGIFPDGQLYIKSELDRELQERYLLLVVASDRAVEPLSAAVNVTVILEDVNDNRPLFNSTNYVFYFEEEQRGGSYVGKINAVDKDFGPNGEVRYSFEHMQPDFELNTVTGEIRSTHQFDREALMRQRGAAVFSLTVIATDQGLPKPLKDQATVQIYMKDINDNAPKFLKDLYQATISELAVNLTQVLRVSASDVDEGVNGLIHYSVIKGNEEKQFAIESSTGQVTLVGNLDHEATASYSLVIQAVDSGVVSLSSTCVLCIDVLDENDNSPSFPKSTLFVDVLENMRVGELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPNFPPGDIFKSIVENVPVGSSVISVTAHDPDADINGQLAYAIVQQMPRGNHFRIDEVRGTIFTSAEIDREFANLFELTVKATDQAVPMETRRFALKNVTILVTDQNDNVPVFISQNALAADPSVVIGSVLMTIIAADPDEGANGEVEYEIINGDTETFIVDRYSGDLRVASALVPSQLIYNLIVSATDLGPERRKSTTEMTIILQGVDGPVFTQPKYITILKEGEPIGTNVISIEAASPRGSAAQVEYFIVSVRCEDKSLGRLFTIGRHTGVIQTAAILDREQGARLYLLDVYAIEKSSVLPRTQRAEVEITLQDINDNPPVFPTDMLDLTVEENMGDGSKILQLTAMDADEGANALVTYTIISGADDSFHIDPESGDLIATRRLDRERRSKYSLLVRADDGLQSSDMRINITVSDVNDHIPKFSKPVYSFDIPEDATPGSLVAAILATDDDSGINGEITYTVSEDDEEGIFFLNPVTGVFNLTRALDYEAQQYYILTVCAEDGGGQFTAIRVYFNILDVNDNPPVFSMSSYSTSVMENLAPGAAIL…
SIO_010081: FAT4
subclass of: SO_0000673
so part of: FAT4
location: join(1240574..1245856,1291582..1291713,1293472..1293733,1296183..1296533,1300840..1301765,1302735..1302909,1313917..1314097,1317005..1317255,1320187..1324536,1330089..1330193,1331704..1332011,1335887..1335972,1337356..1337535,1338396..1338520,1339605..1339813,1344053..1344314,1346064..1347943)
location: region:1240574-1347943:1
so has part: feature:1240574-1245856:1:exon
so has part: feature:1291582-1291713:1:exon
so has part: feature:1293472-1293733:1:exon
so has part: feature:1296183-1296533:1:exon
so has part: feature:1300840-1301765:1:exon
so has part: feature:1302735-1302909:1:exon
so has part: feature:1313917-1314097:1:exon
so has part: feature:1317005-1317255:1:exon
so has part: feature:1320187-1324536:1:exon
so has part: feature:1330089-1330193:1:exon
so has part: feature:1331704-1332011:1:exon
so has part: feature:1335887-1335972:1:exon
so has part: feature:1337356-1337535:1:exon
so has part: feature:1338396-1338520:1:exon
so has part: feature:1339605-1339813:1:exon
so has part: feature:1344053-1344314:1:exon
so has part: feature:1346064-1347943:1:exon

XP_030306535.1
type: Protein
SIO_000068: ncbiprotein

position:1347943:1
position: 1347943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1240574-1245856:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1291582-1291713:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1293472-1293733:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1296183-1296533:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1300840-1301765:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1302735-1302909:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1313917-1314097:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1317005-1317255:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1320187-1324536:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1330089-1330193:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1331704-1332011:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1335887-1335972:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1337356-1337535:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1338396-1338520:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1339605-1339813:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1344053-1344314:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1346064-1347943:1:exon

LOC115598353
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115598353
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1457366..1477746
location: region:1457366-1477746:1
so has part: feature:1457366-1477746:1:exon
subclass of: SO_0000011

115598353
type: Gene
SIO_000068: ncbigene

position:1457366:1
position: 1457366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1477746:1
position: 1477746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1457366-1477746:1:exon

LOC115598353
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115598353
product: uncharacterized LOC115598353
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003987593.1
SIO_010081: LOC115598353
subclass of: SO_0000673
so part of: LOC115598353
location: join(1457366..1457448,1473624..1473725,1477666..1477746)
location: region:1457366-1477746:1
so has part: feature:1457366-1457448:1:exon
so has part: feature:1473624-1473725:1:exon
so has part: feature:1477666-1477746:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1457366-1457448:1:exon

position:1457448:1
position: 1457448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1473624-1473725:1:exon

position:1473624:1
position: 1473624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1473725:1
position: 1473725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1477666-1477746:1:exon

position:1477666:1
position: 1477666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

INTU
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: INTU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1842146..1865609
location: region:1842146-1865609:1
so has part: feature:1842146-1865609:1:exon
subclass of: SO_0000010

103537018
type: Gene
SIO_000068: ncbigene

position:1842146:1
position: 1842146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1865609:1
position: 1865609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1842146-1865609:1:exon

INTU
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: INTU
product: inturned planar cell polarity protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030450779.1
SIO_010081: INTU
subclass of: SO_0000673
so part of: INTU
location: join(1842146..1842778,1842867..1843464,1847327..1847412,1849571..1849774,1854162..1854280,1855546..1855635,1856047..1856124,1857187..1857376,1858427..1858480,1859845..1859907,1860933..1861154,1861714..1862133,1862638..1862735,1863205..1863394,1864035..1864189,1864878..1865609)
location: region:1842146-1865609:1
so has part: feature:1842146-1842778:1:exon
so has part: feature:1842867-1843464:1:exon
so has part: feature:1847327-1847412:1:exon
so has part: feature:1849571-1849774:1:exon
so has part: feature:1854162-1854280:1:exon
so has part: feature:1855546-1855635:1:exon
so has part: feature:1856047-1856124:1:exon
so has part: feature:1857187-1857376:1:exon
so has part: feature:1858427-1858480:1:exon
so has part: feature:1859845-1859907:1:exon
so has part: feature:1860933-1861154:1:exon
so has part: feature:1861714-1862133:1:exon
so has part: feature:1862638-1862735:1:exon
so has part: feature:1863205-1863394:1:exon
so has part: feature:1864035-1864189:1:exon
so has part: feature:1864878-1865609:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1842146-1842778:1:exon

position:1842778:1
position: 1842778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1842867-1843464:1:exon

position:1842867:1
position: 1842867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1843464:1
position: 1843464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1847327-1847412:1:exon

position:1847327:1
position: 1847327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1847412:1
position: 1847412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1849571-1849774:1:exon

position:1849571:1
position: 1849571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1849774:1
position: 1849774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1854162-1854280:1:exon

position:1854162:1
position: 1854162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1854280:1
position: 1854280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1855546-1855635:1:exon

position:1855546:1
position: 1855546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1855635:1
position: 1855635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1856047-1856124:1:exon

position:1856047:1
position: 1856047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1856124:1
position: 1856124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1857187-1857376:1:exon

position:1857187:1
position: 1857187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1857376:1
position: 1857376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1858427-1858480:1:exon

position:1858427:1
position: 1858427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1858480:1
position: 1858480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1859845-1859907:1:exon

position:1859845:1
position: 1859845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1859907:1
position: 1859907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1860933-1861154:1:exon

position:1860933:1
position: 1860933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1861154:1
position: 1861154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1861714-1862133:1:exon

position:1861714:1
position: 1861714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1862133:1
position: 1862133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1862638-1862735:1:exon

position:1862638:1
position: 1862638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1862735:1
position: 1862735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1863205-1863394:1:exon

position:1863205:1
position: 1863205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1863394:1
position: 1863394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1864035-1864189:1:exon

position:1864035:1
position: 1864035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1864189:1
position: 1864189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1864878-1865609:1:exon

position:1864878:1
position: 1864878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

INTU
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: INTU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein inturned
translation: MPFLAISIPRTSLTLMANLEQLNFQYSRGSMLSNHSSFFPSDLEPEWLDGVQKNGELFYLEVSESEEETLLQNSCPEVPAVNHVRFHENEAEVIQEGSRKARKYELKKLTKILKKKNLLPKHSGKKGSGSCGPTSILKHQSAQKMGVTVQQKYKDVYVHVNPRKVCSAGEKQYRLLEALVGIVHQSSWSSRRAEKQGRKDKVSRGVSEEKLVVHGLVPCSSAVKTGQILIGDALVAVNDVDVNSENIERVLSCIPGPMQVKLTFETSVIEPEGTSQQRCKQAQSSMNHLVQLLWGEDSTDFQQAMQEVPHVVMFLSMKLDSETSKDEQEILYQYPISEASQKLRSVRGIFLTLSDILESVTGTQIISSSLFLCEKLVQVVYWKENDKLLVIGLPEENVPLSQLKNMIEDVVRTLTFMYSSLESAFCQVENVSRLDHFFNLFFQRALQPSRLKPSSSPGVQHHHTCSAIFLDNLPGLRWLTLPQEIKMEIDTALSDLEAADFAELSEDYYDMRRLYMIMGSCLFYKGYLIGSHLAKEDLLDVGLYCRHHCLLPLAAEQKVGQLVIWREVFPQHHIQTGQGSSFTGYREPEARYFLLIVGLKHFMLCVLLEAGGCASKAVGNPGPDCIYVDQVKATILQLEGIDASIEERLDSPSIPPLSCADWFLPATRDKLEGLTTSPTPNKLQNASKPVTTPASRRTLFGDSLLTRKPSPTRSSGGAEQGNEGPAEEESSNPQAVADQATKKKHTLPNPFHLGNLKKNLSEKDTELLNALKLTSGPENTLFHYLSLETMQGIFITPTHKEVARLGGSIHPQLIENFYRCCLSIRSVFQQSMRKQEKKKAGSGISEFSDAAEDLDLVTEHGVLFEYSPDHWTDQKKSPPTMSYWVVGRLILHPKPQECYVCFHDSVTEAAVELAFKLSFGLVT
SIO_010081: INTU
subclass of: SO_0000673
so part of: INTU
location: join(1842686..1842778,1842867..1843464,1847327..1847412,1849571..1849774,1854162..1854280,1855546..1855635,1856047..1856124,1857187..1857376,1858427..1858480,1859845..1859907,1860933..1861154,1861714..1862133,1862638..1862735,1863205..1863394,1864035..1864189,1864878..1864989)
location: region:1842686-1864989:1
so has part: feature:1842686-1842778:1:exon
so has part: feature:1842867-1843464:1:exon
so has part: feature:1847327-1847412:1:exon
so has part: feature:1849571-1849774:1:exon
so has part: feature:1854162-1854280:1:exon
so has part: feature:1855546-1855635:1:exon
so has part: feature:1856047-1856124:1:exon
so has part: feature:1857187-1857376:1:exon
so has part: feature:1858427-1858480:1:exon
so has part: feature:1859845-1859907:1:exon
so has part: feature:1860933-1861154:1:exon
so has part: feature:1861714-1862133:1:exon
so has part: feature:1862638-1862735:1:exon
so has part: feature:1863205-1863394:1:exon
so has part: feature:1864035-1864189:1:exon
so has part: feature:1864878-1864989:1:exon

XP_030306639.1
type: Protein
SIO_000068: ncbiprotein

position:1842686:1
position: 1842686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1864989:1
position: 1864989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1842686-1842778:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1842867-1843464:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1847327-1847412:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1849571-1849774:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1854162-1854280:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1855546-1855635:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1856047-1856124:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1857187-1857376:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1858427-1858480:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1859845-1859907:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1860933-1861154:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1861714-1862133:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1862638-1862735:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1863205-1863394:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1864035-1864189:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1864878-1864989:1:exon

LOC115598341
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115598341
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1843213..1874669)
location: region:1843213-1874669:-1
so has part: feature:1843213-1874669:-1:exon
subclass of: SO_0000011

115598341
type: Gene
SIO_000068: ncbigene

position:1843213:-1
position: 1843213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1874669:-1
position: 1874669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1843213-1874669:-1:exon

LOC115598341
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115598341
product: uncharacterized LOC115598341
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003987582.1
SIO_010081: LOC115598341
subclass of: SO_0000673
so part of: LOC115598341
location: complement(join(1843213..1843350,1856797..1856882,1874094..1874209,1874372..1874669))
location: region:1843213-1874669:-1
so has part: feature:1874372-1874669:-1:exon
so has part: feature:1874094-1874209:-1:exon
so has part: feature:1856797-1856882:-1:exon
so has part: feature:1843213-1843350:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1874372-1874669:-1:exon

position:1874372:-1
position: 1874372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1874094-1874209:-1:exon

position:1874094:-1
position: 1874094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1874209:-1
position: 1874209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1856797-1856882:-1:exon

position:1856797:-1
position: 1856797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1856882:-1
position: 1856882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1843213-1843350:-1:exon

position:1843350:-1
position: 1843350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HSPA4L
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: HSPA4L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1874654..1898282
location: region:1874654-1898282:1
so has part: feature:1874654-1898282:1:exon
subclass of: SO_0000010

103537017
type: Gene
SIO_000068: ncbigene

position:1874654:1
position: 1874654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1898282:1
position: 1898282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1874654-1898282:1:exon

HSPA4L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: HSPA4L
product: heat shock protein family A (Hsp70) member 4 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 ESTs, 17 long SRA reads, 16 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030450777.1
SIO_010081: HSPA4L
subclass of: SO_0000673
so part of: HSPA4L
location: join(1874654..1875132,1878876..1878933,1880300..1880440,1881204..1881326,1882498..1882597,1884200..1884333,1885237..1885481,1885573..1885649,1886856..1887007,1887496..1887602,1887979..1888112,1889145..1889347,1891701..1891802,1892293..1892430,1893012..1893137,1893375..1893482,1894147..1894266,1894804..1894965,1895407..1898282)
location: region:1874654-1898282:1
so has part: feature:1874654-1875132:1:exon
so has part: feature:1878876-1878933:1:exon
so has part: feature:1880300-1880440:1:exon
so has part: feature:1881204-1881326:1:exon
so has part: feature:1882498-1882597:1:exon
so has part: feature:1884200-1884333:1:exon
so has part: feature:1885237-1885481:1:exon
so has part: feature:1885573-1885649:1:exon
so has part: feature:1886856-1887007:1:exon
so has part: feature:1887496-1887602:1:exon
so has part: feature:1887979-1888112:1:exon
so has part: feature:1889145-1889347:1:exon
so has part: feature:1891701-1891802:1:exon
so has part: feature:1892293-1892430:1:exon
so has part: feature:1893012-1893137:1:exon
so has part: feature:1893375-1893482:1:exon
so has part: feature:1894147-1894266:1:exon
so has part: feature:1894804-1894965:1:exon
so has part: feature:1895407-1898282:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1874654-1875132:1:exon

position:1875132:1
position: 1875132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1878876-1878933:1:exon

position:1878876:1
position: 1878876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1878933:1
position: 1878933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1880300-1880440:1:exon

position:1880300:1
position: 1880300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1880440:1
position: 1880440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1881204-1881326:1:exon

position:1881204:1
position: 1881204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1881326:1
position: 1881326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1882498-1882597:1:exon

position:1882498:1
position: 1882498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1882597:1
position: 1882597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1884200-1884333:1:exon

position:1884200:1
position: 1884200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1884333:1
position: 1884333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1885237-1885481:1:exon

position:1885237:1
position: 1885237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1885481:1
position: 1885481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1885573-1885649:1:exon

position:1885573:1
position: 1885573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1885649:1
position: 1885649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1886856-1887007:1:exon

position:1886856:1
position: 1886856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1887007:1
position: 1887007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1887496-1887602:1:exon

position:1887496:1
position: 1887496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1887602:1
position: 1887602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1887979-1888112:1:exon

position:1887979:1
position: 1887979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1888112:1
position: 1888112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1889145-1889347:1:exon

position:1889145:1
position: 1889145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1889347:1
position: 1889347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1891701-1891802:1:exon

position:1891701:1
position: 1891701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1891802:1
position: 1891802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1892293-1892430:1:exon

position:1892293:1
position: 1892293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1892430:1
position: 1892430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1893012-1893137:1:exon

position:1893012:1
position: 1893012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1893137:1
position: 1893137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1893375-1893482:1:exon

position:1893375:1
position: 1893375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1893482:1
position: 1893482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1894147-1894266:1:exon

position:1894147:1
position: 1894147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1894266:1
position: 1894266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1894804-1894965:1:exon

position:1894804:1
position: 1894804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1894965:1
position: 1894965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1895407-1898282:1:exon

position:1895407:1
position: 1895407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HSPA4L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: HSPA4L
product: heat shock protein family A (Hsp70) member 4 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 ESTs, 1 long SRA read, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030450778.1
SIO_010081: HSPA4L
subclass of: SO_0000673
so part of: HSPA4L
location: join(1874773..1875132,1878876..1878933,1880300..1880440,1881204..1881326,1882498..1882597,1884200..1884333,1885237..1885481,1885573..1885649,1886856..1887007,1887496..1887602,1887979..1888112,1889145..1889347,1892293..1892430,1893012..1893137,1893375..1893482,1894147..1894266,1894804..1894965,1895407..1898282)
location: region:1874773-1898282:1
so has part: feature:1874773-1875132:1:exon
so has part: feature:1878876-1878933:1:exon
so has part: feature:1880300-1880440:1:exon
so has part: feature:1881204-1881326:1:exon
so has part: feature:1882498-1882597:1:exon
so has part: feature:1884200-1884333:1:exon
so has part: feature:1885237-1885481:1:exon
so has part: feature:1885573-1885649:1:exon
so has part: feature:1886856-1887007:1:exon
so has part: feature:1887496-1887602:1:exon
so has part: feature:1887979-1888112:1:exon
so has part: feature:1889145-1889347:1:exon
so has part: feature:1892293-1892430:1:exon
so has part: feature:1893012-1893137:1:exon
so has part: feature:1893375-1893482:1:exon
so has part: feature:1894147-1894266:1:exon
so has part: feature:1894804-1894965:1:exon
so has part: feature:1895407-1898282:1:exon

position:1874773:1
position: 1874773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1874773-1875132:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1878876-1878933:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1880300-1880440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1881204-1881326:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1882498-1882597:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1884200-1884333:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1885237-1885481:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1885573-1885649:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1886856-1887007:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1887496-1887602:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1887979-1888112:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1889145-1889347:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1892293-1892430:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1893012-1893137:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1893375-1893482:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1894147-1894266:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1894804-1894965:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1895407-1898282:1:exon

HSPA4L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: HSPA4L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock 70 kDa protein 4L isoform X1
translation: MSVVGIDLGFLNCYIGVARSGGIETIANEYSDRCTPACISLGSKTRAIGNAAKSQIVTNVKNTLHGFKKLHGRAFEDPYIQSERAKLPYELQKMPNGSVGVKVRYLDEERLFAIEQITGMLLAKLKETSESALKKPVADCVISVPSFFTDAERRSVMAAAQIAGLNCLKLMNETTAVALAYGIYKQDLPALEEKPRNVVFVDMGHSAYQVSICAFNKGKLKVLATTFDPFLGGRSFDEALVDYFSEEFRTKYKLNVKENPRAVLRLYQECEKLKKLMSANASDLPLNIECFMNDLDVSSKMNRAQFEQLCAALLSRVEPPLRAAMDQAKLQREDIYSIEIVGGATRIPAVKEQISSFFCKEISTTLNADEAVARGCALQCAILSPAFKVREFSITDVVPYSVTLRWKSSYEEGTGECEVFSKNHAAPFSKVITFHKKEPFDLEAYYTHPHEVPYPDSRIGRFTIQNVGPQHDGDNSKVKVKVRVNIHGLFSVANASVIEKLNVEGDHSDAPMDTESSSKSQGRDEELDKMQVDQDEGIQKSQAEQQNQADEETENAGTETKTASGDKQDHSAQPKAKTKVKSIDLPIQASLYRQLGQDLINSYIENEGKMMMQDKLEKERNDAKNAVEEYVYDFRDKLCGVFEKFITEEDANKLTLMLEDTENWLYEDGEDQPKQVYVDKLQELRKFGQPIQERYMEHEERPKVLNELGKKIQLLMKAVEAYKNKDEKYDHLDPAEMEKVEKYINEAMNWLNSKMNAQNKLSLTQDPVVKVAEILTKSKELDSFCNPIIYKPKPKIEPPSDGQSKANGEHNGPVNGQSGAEPKPEPAKDTSQQTKPPGEMEVD
SIO_010081: HSPA4L
subclass of: SO_0000673
so part of: HSPA4L
location: join(1875026..1875132,1878876..1878933,1880300..1880440,1881204..1881326,1882498..1882597,1884200..1884333,1885237..1885481,1885573..1885649,1886856..1887007,1887496..1887602,1887979..1888112,1889145..1889347,1891701..1891802,1892293..1892430,1893012..1893137,1893375..1893482,1894147..1894266,1894804..1894965,1895407..1895601)
location: region:1875026-1895601:1
so has part: feature:1875026-1875132:1:exon
so has part: feature:1878876-1878933:1:exon
so has part: feature:1880300-1880440:1:exon
so has part: feature:1881204-1881326:1:exon
so has part: feature:1882498-1882597:1:exon
so has part: feature:1884200-1884333:1:exon
so has part: feature:1885237-1885481:1:exon
so has part: feature:1885573-1885649:1:exon
so has part: feature:1886856-1887007:1:exon
so has part: feature:1887496-1887602:1:exon
so has part: feature:1887979-1888112:1:exon
so has part: feature:1889145-1889347:1:exon
so has part: feature:1891701-1891802:1:exon
so has part: feature:1892293-1892430:1:exon
so has part: feature:1893012-1893137:1:exon
so has part: feature:1893375-1893482:1:exon
so has part: feature:1894147-1894266:1:exon
so has part: feature:1894804-1894965:1:exon
so has part: feature:1895407-1895601:1:exon

XP_030306637.1
type: Protein
SIO_000068: ncbiprotein

position:1875026:1
position: 1875026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1895601:1
position: 1895601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1875026-1875132:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1878876-1878933:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1880300-1880440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1881204-1881326:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1882498-1882597:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1884200-1884333:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1885237-1885481:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1885573-1885649:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1886856-1887007:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1887496-1887602:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1887979-1888112:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1889145-1889347:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1891701-1891802:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1892293-1892430:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1893012-1893137:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1893375-1893482:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1894147-1894266:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1894804-1894965:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1895407-1895601:1:exon

HSPA4L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: HSPA4L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock 70 kDa protein 4L isoform X2
translation: MSVVGIDLGFLNCYIGVARSGGIETIANEYSDRCTPACISLGSKTRAIGNAAKSQIVTNVKNTLHGFKKLHGRAFEDPYIQSERAKLPYELQKMPNGSVGVKVRYLDEERLFAIEQITGMLLAKLKETSESALKKPVADCVISVPSFFTDAERRSVMAAAQIAGLNCLKLMNETTAVALAYGIYKQDLPALEEKPRNVVFVDMGHSAYQVSICAFNKGKLKVLATTFDPFLGGRSFDEALVDYFSEEFRTKYKLNVKENPRAVLRLYQECEKLKKLMSANASDLPLNIECFMNDLDVSSKMNRAQFEQLCAALLSRVEPPLRAAMDQAKLQREDIYSIEIVGGATRIPAVKEQISSFFCKEISTTLNADEAVARGCALQCAILSPAFKVREFSITDVVPYSVTLRWKSSYEEGTGECEVFSKNHAAPFSKVITFHKKEPFDLEAYYTHPHEVPYPDSRIGRFTIQNVGPQHDGDNSKVKVKVRVNIHGLFSVANASVIEKLNVEGDHSDAPMDTESSSKSQGRDEELTASGDKQDHSAQPKAKTKVKSIDLPIQASLYRQLGQDLINSYIENEGKMMMQDKLEKERNDAKNAVEEYVYDFRDKLCGVFEKFITEEDANKLTLMLEDTENWLYEDGEDQPKQVYVDKLQELRKFGQPIQERYMEHEERPKVLNELGKKIQLLMKAVEAYKNKDEKYDHLDPAEMEKVEKYINEAMNWLNSKMNAQNKLSLTQDPVVKVAEILTKSKELDSFCNPIIYKPKPKIEPPSDGQSKANGEHNGPVNGQSGAEPKPEPAKDTSQQTKPPGEMEVD
SIO_010081: HSPA4L
subclass of: SO_0000673
so part of: HSPA4L
location: join(1875026..1875132,1878876..1878933,1880300..1880440,1881204..1881326,1882498..1882597,1884200..1884333,1885237..1885481,1885573..1885649,1886856..1887007,1887496..1887602,1887979..1888112,1889145..1889347,1892293..1892430,1893012..1893137,1893375..1893482,1894147..1894266,1894804..1894965,1895407..1895601)
location: region:1875026-1895601:1
so has part: feature:1875026-1875132:1:exon
so has part: feature:1878876-1878933:1:exon
so has part: feature:1880300-1880440:1:exon
so has part: feature:1881204-1881326:1:exon
so has part: feature:1882498-1882597:1:exon
so has part: feature:1884200-1884333:1:exon
so has part: feature:1885237-1885481:1:exon
so has part: feature:1885573-1885649:1:exon
so has part: feature:1886856-1887007:1:exon
so has part: feature:1887496-1887602:1:exon
so has part: feature:1887979-1888112:1:exon
so has part: feature:1889145-1889347:1:exon
so has part: feature:1892293-1892430:1:exon
so has part: feature:1893012-1893137:1:exon
so has part: feature:1893375-1893482:1:exon
so has part: feature:1894147-1894266:1:exon
so has part: feature:1894804-1894965:1:exon
so has part: feature:1895407-1895601:1:exon

XP_030306638.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1875026-1875132:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1878876-1878933:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1880300-1880440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1881204-1881326:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1882498-1882597:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1884200-1884333:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1885237-1885481:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1885573-1885649:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1886856-1887007:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1887496-1887602:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1887979-1888112:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1889145-1889347:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1892293-1892430:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1893012-1893137:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1893375-1893482:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1894147-1894266:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1894804-1894965:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1895407-1895601:1:exon

PLK4
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PLK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1908313..1922514
location: region:1908313-1922514:1
so has part: feature:1908313-1922514:1:exon
subclass of: SO_0000010

103537016
type: Gene
SIO_000068: ncbigene

position:1908313:1
position: 1908313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1922514:1
position: 1922514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1908313-1922514:1:exon

PLK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PLK4
product: polo like kinase 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030450775.1
SIO_010081: PLK4
subclass of: SO_0000673
so part of: PLK4
location: join(1908313..1908377,1909181..1909276,1909976..1910071,1910160..1910274,1911173..1912205,1913643..1913743,1915270..1915640,1915726..1915830,1916220..1916322,1916834..1916983,1917336..1917466,1918239..1918330,1918698..1918836,1920154..1920294,1921157..1921263,1921984..1922514)
location: region:1908313-1922514:1
so has part: feature:1908313-1908377:1:exon
so has part: feature:1909181-1909276:1:exon
so has part: feature:1909976-1910071:1:exon
so has part: feature:1910160-1910274:1:exon
so has part: feature:1911173-1912205:1:exon
so has part: feature:1913643-1913743:1:exon
so has part: feature:1915270-1915640:1:exon
so has part: feature:1915726-1915830:1:exon
so has part: feature:1916220-1916322:1:exon
so has part: feature:1916834-1916983:1:exon
so has part: feature:1917336-1917466:1:exon
so has part: feature:1918239-1918330:1:exon
so has part: feature:1918698-1918836:1:exon
so has part: feature:1920154-1920294:1:exon
so has part: feature:1921157-1921263:1:exon
so has part: feature:1921984-1922514:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1908313-1908377:1:exon

position:1908377:1
position: 1908377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1909181-1909276:1:exon

position:1909181:1
position: 1909181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1909276:1
position: 1909276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1909976-1910071:1:exon

position:1909976:1
position: 1909976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1910071:1
position: 1910071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1910160-1910274:1:exon

position:1910160:1
position: 1910160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1910274:1
position: 1910274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1911173-1912205:1:exon

position:1911173:1
position: 1911173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1912205:1
position: 1912205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1913643-1913743:1:exon

position:1913643:1
position: 1913643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1913743:1
position: 1913743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1915270-1915640:1:exon

position:1915270:1
position: 1915270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1915640:1
position: 1915640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1915726-1915830:1:exon

position:1915726:1
position: 1915726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1915830:1
position: 1915830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1916220-1916322:1:exon

position:1916220:1
position: 1916220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1916322:1
position: 1916322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1916834-1916983:1:exon

position:1916834:1
position: 1916834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1916983:1
position: 1916983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1917336-1917466:1:exon

position:1917336:1
position: 1917336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1917466:1
position: 1917466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1918239-1918330:1:exon

position:1918239:1
position: 1918239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1918330:1
position: 1918330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1918698-1918836:1:exon

position:1918698:1
position: 1918698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1918836:1
position: 1918836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1920154-1920294:1:exon

position:1920154:1
position: 1920154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1920294:1
position: 1920294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1921157-1921263:1:exon

position:1921157:1
position: 1921157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1921263:1
position: 1921263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1921984-1922514:1:exon

position:1921984:1
position: 1921984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PLK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PLK4
translation: MATCIGEKIEDFKVGNLLGKGSFAGVYRAVSLKTGLEVAIKMIDKKAMHKVGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLILEMCHNGEMSRYIKNRKKPFSEDEARHFLHQIITGMLYLHSHGILHRDLTLSNILLTSNMNVKIADFGLATQLKMPHEKHYTMCGTPNYISPEIATRSPHGLESDVWSLGCMFYTLLIGKPPFDTDTVKNTLNKVVLADYEMPAFLSREAQDLIHKLLRKNPADRLSLSSVLDHPFMSRCGSARSKDLGTSEDSMDSGNATISTTFTGSSNISTSSCLKEKKKLLVGQPLPNKMTFFPKNKNSSNTSSVDGSGSFHQWAIQGKEMGMTGRGRTLQLAEERPHSRYLRRAHSSDRSGTSHSQTQGISSIAGRCHSMELLSKPKVGTRESTECFSPANSYTDIGEIFKEKASSSSGSFEGQISPPVKDQPQSDYLCPMKPQVGLLEQKSQAETMQQWLGSMQTSVPLRPPVDLPGSSNAHGGFRYHLDVQQDASKNSWNTLKDIRSHEGSIDCLHSLSQRNPKKCIPGVLCKSEKIQPLSSCGLWSTSEQNQTWGKEPAPQKPSLRSIVSPLSAQRLKPIRQKTKNAVVSILDTGEVCMEFLKEHHSQELVKEVLRISSDGNVIAVYHPNEGRGFLLGDRPPAPPEDICMYNVDNLPEKYWKKYQYAAKFVQLVRTKTPKVTFYTRYAKCMLMENSPTADVEVCFYDGAKIHKTDGIIRVIEKSGKSFTLKGENEAGLKKEIQAYMDHANEGHRICLALEAAVLEEEKRSESVPFFPIIVGRKPGNTESPQAVASPLLDNTNYPKEVMALNRNIAASSAPVQTPSCPPVVSCEKPTFMTTAETTCSSSAHQTECSPTSAQLLKSVFVKNVGWASQLTSGAVWVQFNDGSQLVAQAGVSSITYTSPDGQTTRYGENDKLPEYIKEKLHCLSSILVMFTNPAGPH
SIO_010081: PLK4
subclass of: SO_0000673
so part of: PLK4
location: join(1908348..1908377,1909181..1909276,1909976..1910071,1910160..1910274,1911173..1912205,1913643..1913743,1915270..1915640,1915726..1915830,1916220..1916322,1916834..1916983,1917336..1917466,1918239..1918330,1918698..1918836,1920154..1920294,1921157..1921263,1921984..1922083)
location: region:1908348-1922083:1
so has part: feature:1908348-1908377:1:exon
so has part: feature:1909181-1909276:1:exon
so has part: feature:1909976-1910071:1:exon
so has part: feature:1910160-1910274:1:exon
so has part: feature:1911173-1912205:1:exon
so has part: feature:1913643-1913743:1:exon
so has part: feature:1915270-1915640:1:exon
so has part: feature:1915726-1915830:1:exon
so has part: feature:1916220-1916322:1:exon
so has part: feature:1916834-1916983:1:exon
so has part: feature:1917336-1917466:1:exon
so has part: feature:1918239-1918330:1:exon
so has part: feature:1918698-1918836:1:exon
so has part: feature:1920154-1920294:1:exon
so has part: feature:1921157-1921263:1:exon
so has part: feature:1921984-1922083:1:exon

XP_030306635.1
type: Protein
SIO_000068: ncbiprotein

position:1908348:1
position: 1908348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1922083:1
position: 1922083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1908348-1908377:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1909181-1909276:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1909976-1910071:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1910160-1910274:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1911173-1912205:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1913643-1913743:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1915270-1915640:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1915726-1915830:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1916220-1916322:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1916834-1916983:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1917336-1917466:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1918239-1918330:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1918698-1918836:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1920154-1920294:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1921157-1921263:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1921984-1922083:1:exon

MFSD8
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: MFSD8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1923262..1935305)
location: region:1923262-1935305:-1
so has part: feature:1923262-1935305:-1:exon
subclass of: SO_0000010

103537015
type: Gene
SIO_000068: ncbigene

position:1923262:-1
position: 1923262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1935305:-1
position: 1935305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1923262-1935305:-1:exon

MFSD8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MFSD8
product: major facilitator superfamily domain containing 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_008503263.2
SIO_010081: MFSD8
subclass of: SO_0000673
so part of: MFSD8
location: complement(join(1923262..1924681,1925403..1925662,1925752..1925855,1926171..1926305,1927393..1927501,1928344..1928399,1929397..1929541,1930145..1930258,1930559..1930799,1932296..1932339,1933370..1933455,1935130..1935305))
location: region:1923262-1935305:-1
so has part: feature:1935130-1935305:-1:exon
so has part: feature:1933370-1933455:-1:exon
so has part: feature:1932296-1932339:-1:exon
so has part: feature:1930559-1930799:-1:exon
so has part: feature:1930145-1930258:-1:exon
so has part: feature:1929397-1929541:-1:exon
so has part: feature:1928344-1928399:-1:exon
so has part: feature:1927393-1927501:-1:exon
so has part: feature:1926171-1926305:-1:exon
so has part: feature:1925752-1925855:-1:exon
so has part: feature:1925403-1925662:-1:exon
so has part: feature:1923262-1924681:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1935130-1935305:-1:exon

position:1935130:-1
position: 1935130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1933370-1933455:-1:exon

position:1933370:-1
position: 1933370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1933455:-1
position: 1933455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1932296-1932339:-1:exon

position:1932296:-1
position: 1932296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1932339:-1
position: 1932339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1930559-1930799:-1:exon

position:1930559:-1
position: 1930559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1930799:-1
position: 1930799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1930145-1930258:-1:exon

position:1930145:-1
position: 1930145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1930258:-1
position: 1930258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1929397-1929541:-1:exon

position:1929397:-1
position: 1929397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1929541:-1
position: 1929541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1928344-1928399:-1:exon

position:1928344:-1
position: 1928344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1928399:-1
position: 1928399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1927393-1927501:-1:exon

position:1927393:-1
position: 1927393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1927501:-1
position: 1927501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1926171-1926305:-1:exon

position:1926171:-1
position: 1926171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1926305:-1
position: 1926305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1925752-1925855:-1:exon

position:1925752:-1
position: 1925752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1925855:-1
position: 1925855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1925403-1925662:-1:exon

position:1925403:-1
position: 1925403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1925662:-1
position: 1925662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1923262-1924681:-1:exon

position:1924681:-1
position: 1924681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MFSD8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MFSD8
product: major facilitator superfamily domain containing 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030450559.1
SIO_010081: MFSD8
subclass of: SO_0000673
so part of: MFSD8
location: complement(join(1923262..1924681,1925403..1925662,1925752..1925855,1926171..1926305,1927393..1927501,1928344..1928399,1929397..1929541,1930145..1930258,1930559..1930799,1932296..1932339,1933370..1933455,1934495..1934601,1935130..1935212))
location: region:1923262-1935212:-1
so has part: feature:1935130-1935212:-1:exon
so has part: feature:1934495-1934601:-1:exon
so has part: feature:1933370-1933455:-1:exon
so has part: feature:1932296-1932339:-1:exon
so has part: feature:1930559-1930799:-1:exon
so has part: feature:1930145-1930258:-1:exon
so has part: feature:1929397-1929541:-1:exon
so has part: feature:1928344-1928399:-1:exon
so has part: feature:1927393-1927501:-1:exon
so has part: feature:1926171-1926305:-1:exon
so has part: feature:1925752-1925855:-1:exon
so has part: feature:1925403-1925662:-1:exon
so has part: feature:1923262-1924681:-1:exon

position:1935212:-1
position: 1935212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1935130-1935212:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1934495-1934601:-1:exon

position:1934495:-1
position: 1934495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1934601:-1
position: 1934601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1933370-1933455:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1932296-1932339:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1930559-1930799:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1930145-1930258:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1929397-1929541:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1928344-1928399:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1927393-1927501:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1926171-1926305:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1925752-1925855:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1925403-1925662:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1923262-1924681:-1:exon

MFSD8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MFSD8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: major facilitator superfamily domain-containing protein 8 isoform X1
translation: MATAVSDPEVSAEEQEPLLNPRERRYAVETQMHYMSRWRSIRIMYLTMFLSSVGFSIVIMSVWPYLQKIDPTADASFLGWIIASYSIGQMVASPLFGVWSNYRPRREPLVVSSAISVAANCLYAYVHVPHSYNKYYMLTARALVGFGAGNVAAVRSYIAGATSLTERTSAMANTSACQAIGFILGPVFQTCFTLIGEEGITWKLIHLQLNMYTAPVLFGAFLGVVNIILIFAIFREHRVDDMGRQYGSVNFAEESAGLDQDTEGNVDHVAVVAINFLFFVILFVFAVFETIATPLTMDMYSWTREEAVLYNGIILCVVGIESVVVFMVVKALSKKTGERAILLGGLLIILAGFFVLLPWGEKLPNIQWQEIKNNSIPQTTSTEMPTLALSLPAMKLAPQSTAQPVGCPVTQPWCFSTPKIYLAQYISSDVLIGLGYPVCNVMSYTLYSKILGPKPQGVYMGWLTASGSGARILGPVFVSQIYTHLGPRWAFSLICGVVTVSLFILEMVYKRLIAFSVRYGRVQEENC
SIO_010081: MFSD8
subclass of: SO_0000673
so part of: MFSD8
location: complement(join(1924466..1924681,1925403..1925662,1925752..1925855,1926171..1926305,1927393..1927501,1928344..1928399,1929397..1929541,1930145..1930258,1930559..1930799,1932296..1932339,1933370..1933455,1935130..1935203))
location: region:1924466-1935203:-1
so has part: feature:1935130-1935203:-1:exon
so has part: feature:1933370-1933455:-1:exon
so has part: feature:1932296-1932339:-1:exon
so has part: feature:1930559-1930799:-1:exon
so has part: feature:1930145-1930258:-1:exon
so has part: feature:1929397-1929541:-1:exon
so has part: feature:1928344-1928399:-1:exon
so has part: feature:1927393-1927501:-1:exon
so has part: feature:1926171-1926305:-1:exon
so has part: feature:1925752-1925855:-1:exon
so has part: feature:1925403-1925662:-1:exon
so has part: feature:1924466-1924681:-1:exon

XP_008501485.1
type: Protein
SIO_000068: ncbiprotein

position:1924466:-1
position: 1924466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1935203:-1
position: 1935203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1935130-1935203:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1933370-1933455:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1932296-1932339:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1930559-1930799:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1930145-1930258:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1929397-1929541:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1928344-1928399:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1927393-1927501:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1926171-1926305:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1925752-1925855:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1925403-1925662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1924466-1924681:-1:exon

MFSD8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MFSD8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: major facilitator superfamily domain-containing protein 8 isoform X2
translation: MHYMSRWRSIRIMYLTMFLSSVGFSIVIMSVWPYLQKIDPTADASFLGWIIASYSIGQMVASPLFGVWSNYRPRREPLVVSSAISVAANCLYAYVHVPHSYNKYYMLTARALVGFGAGNVAAVRSYIAGATSLTERTSAMANTSACQAIGFILGPVFQTCFTLIGEEGITWKLIHLQLNMYTAPVLFGAFLGVVNIILIFAIFREHRVDDMGRQYGSVNFAEESAGLDQDTEGNVDHVAVVAINFLFFVILFVFAVFETIATPLTMDMYSWTREEAVLYNGIILCVVGIESVVVFMVVKALSKKTGERAILLGGLLIILAGFFVLLPWGEKLPNIQWQEIKNNSIPQTTSTEMPTLALSLPAMKLAPQSTAQPVGCPVTQPWCFSTPKIYLAQYISSDVLIGLGYPVCNVMSYTLYSKILGPKPQGVYMGWLTASGSGARILGPVFVSQIYTHLGPRWAFSLICGVVTVSLFILEMVYKRLIAFSVRYGRVQEENC
SIO_010081: MFSD8
subclass of: SO_0000673
so part of: MFSD8
location: complement(join(1924466..1924681,1925403..1925662,1925752..1925855,1926171..1926305,1927393..1927501,1928344..1928399,1929397..1929541,1930145..1930258,1930559..1930799,1932296..1932339,1933370..1933436))
location: region:1924466-1933436:-1
so has part: feature:1933370-1933436:-1:exon
so has part: feature:1932296-1932339:-1:exon
so has part: feature:1930559-1930799:-1:exon
so has part: feature:1930145-1930258:-1:exon
so has part: feature:1929397-1929541:-1:exon
so has part: feature:1928344-1928399:-1:exon
so has part: feature:1927393-1927501:-1:exon
so has part: feature:1926171-1926305:-1:exon
so has part: feature:1925752-1925855:-1:exon
so has part: feature:1925403-1925662:-1:exon
so has part: feature:1924466-1924681:-1:exon

XP_030306419.1
type: Protein
SIO_000068: ncbiprotein

position:1933436:-1
position: 1933436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1933370-1933436:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1932296-1932339:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1930559-1930799:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1930145-1930258:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1929397-1929541:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1928344-1928399:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1927393-1927501:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1926171-1926305:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1925752-1925855:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1925403-1925662:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1924466-1924681:-1:exon

ABHD18
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ABHD18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1935379..1957183
location: region:1935379-1957183:1
so has part: feature:1935379-1957183:1:exon
subclass of: SO_0000010

103537013
type: Gene
SIO_000068: ncbigene

position:1935379:1
position: 1935379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1957183:1
position: 1957183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1935379-1957183:1:exon

ABHD18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ABHD18
product: abhydrolase domain containing 18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030450629.1
SIO_010081: ABHD18
subclass of: SO_0000673
so part of: ABHD18
location: join(1935379..1935438,1938196..1938341,1939165..1939273,1941968..1942052,1942782..1942882,1944312..1944390,1944473..1944557,1945314..1945341,1947285..1947423,1948608..1948697,1949377..1949478,1950906..1951269,1953335..1953497,1954544..1957183)
location: region:1935379-1957183:1
so has part: feature:1935379-1935438:1:exon
so has part: feature:1938196-1938341:1:exon
so has part: feature:1939165-1939273:1:exon
so has part: feature:1941968-1942052:1:exon
so has part: feature:1942782-1942882:1:exon
so has part: feature:1944312-1944390:1:exon
so has part: feature:1944473-1944557:1:exon
so has part: feature:1945314-1945341:1:exon
so has part: feature:1947285-1947423:1:exon
so has part: feature:1948608-1948697:1:exon
so has part: feature:1949377-1949478:1:exon
so has part: feature:1950906-1951269:1:exon
so has part: feature:1953335-1953497:1:exon
so has part: feature:1954544-1957183:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1935379-1935438:1:exon

position:1935438:1
position: 1935438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1938196-1938341:1:exon

position:1938196:1
position: 1938196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1938341:1
position: 1938341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1939165-1939273:1:exon

position:1939165:1
position: 1939165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1939273:1
position: 1939273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1941968-1942052:1:exon

position:1941968:1
position: 1941968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1942052:1
position: 1942052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1942782-1942882:1:exon

position:1942782:1
position: 1942782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1942882:1
position: 1942882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1944312-1944390:1:exon

position:1944312:1
position: 1944312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1944390:1
position: 1944390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1944473-1944557:1:exon

position:1944473:1
position: 1944473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1944557:1
position: 1944557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1945314-1945341:1:exon

position:1945314:1
position: 1945314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1945341:1
position: 1945341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1947285-1947423:1:exon

position:1947285:1
position: 1947285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1947423:1
position: 1947423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1948608-1948697:1:exon

position:1948608:1
position: 1948608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1948697:1
position: 1948697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1949377-1949478:1:exon

position:1949377:1
position: 1949377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1949478:1
position: 1949478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1950906-1951269:1:exon

position:1950906:1
position: 1950906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1951269:1
position: 1951269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1953335-1953497:1:exon

position:1953335:1
position: 1953335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1953497:1
position: 1953497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1954544-1957183:1:exon

position:1954544:1
position: 1954544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ABHD18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ABHD18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ABHD18
translation: MGVSKLDVLYRKLLLTKLFIRGWGKPEDLKRIFEFRKLIGNREKCQTLVSKDYPVFIDKVEEQSDCRILEGHFISPLAHCVPGILPVESLVARFQFIIPRRWNSKHRPVCIHLAGTGDHHFWRRRTLMARPMIKEACMASLLLENPYYGSRKPKDQLRSCLKNVSDLFVMGGALVLESAALLHWLEREGYGPLGMTGISMGGHMASLAVTNWPKPLPLIPCLSWSTASAVFTTGVLSKAVNWRELEKQYFTETVYEEEIIQMLEYCGTDSFKMGQDFVKNFPDSVDSLVDVDVTSRMFDFDSSNKTVSKEAVHSFATNKSASSERLLMQDSPQMQSINQTFSTSVSKNVTSPQEHRINKRRKSDTLQRESLRFMKGVMDECTHVANFSVPVDPSLIIVVQAKEDAYIPRTGVRSLQEIWPGCEIRYLDGGHISAYLFKQGLFRQAIYDAFNRFLQKYAV
SIO_010081: ABHD18
subclass of: SO_0000673
so part of: ABHD18
location: join(1939182..1939273,1941968..1942052,1942782..1942882,1944312..1944390,1944473..1944557,1945314..1945341,1947285..1947423,1948608..1948697,1949377..1949478,1950906..1951269,1953335..1953497,1954544..1954595)
location: region:1939182-1954595:1
so has part: feature:1939182-1939273:1:exon
so has part: feature:1941968-1942052:1:exon
so has part: feature:1942782-1942882:1:exon
so has part: feature:1944312-1944390:1:exon
so has part: feature:1944473-1944557:1:exon
so has part: feature:1945314-1945341:1:exon
so has part: feature:1947285-1947423:1:exon
so has part: feature:1948608-1948697:1:exon
so has part: feature:1949377-1949478:1:exon
so has part: feature:1950906-1951269:1:exon
so has part: feature:1953335-1953497:1:exon
so has part: feature:1954544-1954595:1:exon

XP_030306489.1
type: Protein
SIO_000068: ncbiprotein

position:1939182:1
position: 1939182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1954595:1
position: 1954595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1939182-1939273:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1941968-1942052:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1942782-1942882:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1944312-1944390:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1944473-1944557:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1945314-1945341:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1947285-1947423:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1948608-1948697:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1949377-1949478:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1950906-1951269:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1953335-1953497:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1954544-1954595:1:exon

LARP1B
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LARP1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1960569..1985943
location: region:1960569-1985943:1
so has part: feature:1960569-1985943:1:exon
subclass of: SO_0000010

103537012
type: Gene
SIO_000068: ncbigene

position:1960569:1
position: 1960569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1985943:1
position: 1985943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1960569-1985943:1:exon

LARP1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LARP1B
product: La ribonucleoprotein domain family member 1B, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030450866.1
SIO_010081: LARP1B
subclass of: SO_0000673
so part of: LARP1B
location: join(1960569..1960863,1968803..1968864,1969976..1970035,1970956..1971124,1971512..1971655,1972178..1972321,1972566..1972734,1976530..1976674,1976885..1977059,1977849..1978021,1978500..1978871,1980014..1980137,1980959..1981170,1981562..1981668,1982083..1982243,1982558..1982702,1983643..1983752,1983973..1984100,1984883..1985943)
location: region:1960569-1985943:1
so has part: feature:1960569-1960863:1:exon
so has part: feature:1968803-1968864:1:exon
so has part: feature:1969976-1970035:1:exon
so has part: feature:1970956-1971124:1:exon
so has part: feature:1971512-1971655:1:exon
so has part: feature:1972178-1972321:1:exon
so has part: feature:1972566-1972734:1:exon
so has part: feature:1976530-1976674:1:exon
so has part: feature:1976885-1977059:1:exon
so has part: feature:1977849-1978021:1:exon
so has part: feature:1978500-1978871:1:exon
so has part: feature:1980014-1980137:1:exon
so has part: feature:1980959-1981170:1:exon
so has part: feature:1981562-1981668:1:exon
so has part: feature:1982083-1982243:1:exon
so has part: feature:1982558-1982702:1:exon
so has part: feature:1983643-1983752:1:exon
so has part: feature:1983973-1984100:1:exon
so has part: feature:1984883-1985943:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1960569-1960863:1:exon

position:1960863:1
position: 1960863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1968803-1968864:1:exon

position:1968803:1
position: 1968803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1968864:1
position: 1968864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1969976-1970035:1:exon

position:1969976:1
position: 1969976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1970035:1
position: 1970035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1970956-1971124:1:exon

position:1970956:1
position: 1970956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1971124:1
position: 1971124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1971512-1971655:1:exon

position:1971512:1
position: 1971512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1971655:1
position: 1971655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1972178-1972321:1:exon

position:1972178:1
position: 1972178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1972321:1
position: 1972321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1972566-1972734:1:exon

position:1972566:1
position: 1972566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1972734:1
position: 1972734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1976530-1976674:1:exon

position:1976530:1
position: 1976530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1976674:1
position: 1976674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1976885-1977059:1:exon

position:1976885:1
position: 1976885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1977059:1
position: 1977059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1977849-1978021:1:exon

position:1977849:1
position: 1977849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1978021:1
position: 1978021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1978500-1978871:1:exon

position:1978500:1
position: 1978500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1978871:1
position: 1978871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1980014-1980137:1:exon

position:1980014:1
position: 1980014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1980137:1
position: 1980137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1980959-1981170:1:exon

position:1980959:1
position: 1980959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1981170:1
position: 1981170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1981562-1981668:1:exon

position:1981562:1
position: 1981562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1981668:1
position: 1981668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1982083-1982243:1:exon

position:1982083:1
position: 1982083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1982243:1
position: 1982243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1982558-1982702:1:exon

position:1982558:1
position: 1982558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1982702:1
position: 1982702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1983643-1983752:1:exon

position:1983643:1
position: 1983643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1983752:1
position: 1983752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1983973-1984100:1:exon

position:1983973:1
position: 1983973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1984100:1
position: 1984100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1984883-1985943:1:exon

position:1984883:1
position: 1984883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LARP1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LARP1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 1B isoform X5
translation: MSAAQVSAAPAERRGWGGAEGGRGGSDSAVSRPRESEEPRRTEPGTSRGEEASEEGDWRRGPAVEAPPPKENPWRRRGPAGSSLSPPAADGPLGPQDPELQNSTKVIKAAKPRTRKCSKGGDFGDITNWPTPSEIANNECKTVSHSKKPINRREKEEKSDQKTNNGIKDNLETKPDGPGDNISEDEAQTNNQRKKGNKQKWVPLHLDDIRSDSQERPGSRTSSRFALDTNKLISHNNRRNETRNWRRDREKREDHDEVCSVRSEGGSIRGSSRGRGRGRGRGRGRGRGNPRMNFEYSVGYQELYGEGTDQVFQPELNASIMYYYGDGTGVQMYSVDETLLKEYIKHQIEYYFSTENLERDFFLRRKMDQQGFLPVSLIASFRRMQALTTNAALILEALKDSTEVETVDQRIRKRVDPEKWPIPGPPPCSLPPTDFSRLINCPEFIPGQVFGSHTESAPSSPRMGSPLSPKENTERSNFQTMSKGLSTSLPDLDSEPWIEVKKRHRASTVKKKGSVPTPEQTPDQQQPPPPPEEQEQEELDFLFDEEMEQMQSQKSKFTDWSDSDSDYEIDDQDVNKILIVTQTPPYMRKHSGGDRTGNHVVRAKITSELAKVINDGLYYYEQDLWMVQSANDTMMKQEIENFKKLNLISKEEFDNLAPEQIADPTQEVPPGPPGLRKDLADELACNSMSTEVPPTTAVARSLPTAVPDPPCVHPGFTLRTPRTPRLQDPNKTPRFYPVVKEARAIDMKTPRKRKTRHSTNPPLECHVGWVMDSRDHRSRTSSVSSSNASPSEGAPLAGGYGCTPNSLPKFQHPSHELLKENGFTQQVYHKYRRRCLMERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALDDAKEHYRYGLECLFRFYSYGLEKKFRQEIFKDFQEETKRDYEAGQLYGLEKFWAYLKYAQHKTPAIDPKLQEYLSNFKRLEDFRVDPPISEESGRKRPVAATGEDLGHHKQQSSFSKTLLVAACQTQALGSVTSGNTVQASRGHKNAARKSIESDVPEK
SIO_010081: LARP1B
subclass of: SO_0000673
so part of: LARP1B
location: join(1960569..1960863,1968803..1968864,1969976..1970035,1970956..1971124,1971512..1971655,1972178..1972321,1972566..1972734,1976530..1976674,1976885..1977059,1977849..1978021,1978500..1978871,1980014..1980137,1980959..1981170,1981562..1981668,1982083..1982243,1982558..1982702,1983643..1983752,1983973..1984100,1984883..1985104)
location: region:1960569-1985104:1
so has part: feature:1960569-1960863:1:exon
so has part: feature:1968803-1968864:1:exon
so has part: feature:1969976-1970035:1:exon
so has part: feature:1970956-1971124:1:exon
so has part: feature:1971512-1971655:1:exon
so has part: feature:1972178-1972321:1:exon
so has part: feature:1972566-1972734:1:exon
so has part: feature:1976530-1976674:1:exon
so has part: feature:1976885-1977059:1:exon
so has part: feature:1977849-1978021:1:exon
so has part: feature:1978500-1978871:1:exon
so has part: feature:1980014-1980137:1:exon
so has part: feature:1980959-1981170:1:exon
so has part: feature:1981562-1981668:1:exon
so has part: feature:1982083-1982243:1:exon
so has part: feature:1982558-1982702:1:exon
so has part: feature:1983643-1983752:1:exon
so has part: feature:1983973-1984100:1:exon
so has part: feature:1984883-1985104:1:exon

XP_030306726.1
type: Protein
SIO_000068: ncbiprotein

position:1985104:1
position: 1985104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1960569-1960863:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1968803-1968864:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1969976-1970035:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1970956-1971124:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1971512-1971655:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1972178-1972321:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1972566-1972734:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1976530-1976674:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1976885-1977059:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1977849-1978021:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1978500-1978871:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1980014-1980137:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1980959-1981170:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1981562-1981668:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1982083-1982243:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1982558-1982702:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1983643-1983752:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1983973-1984100:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1984883-1985104:1:exon

LARP1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LARP1B
product: La ribonucleoprotein domain family member 1B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030450861.1
SIO_010081: LARP1B
subclass of: SO_0000673
so part of: LARP1B
location: join(1960625..1960863,1968803..1968864,1969976..1970035,1970956..1971124,1971512..1971655,1972178..1972333,1972566..1972734,1976530..1976674,1976885..1977059,1977849..1978021,1978500..1978871,1980014..1980137,1980959..1981170,1981562..1981668,1982083..1982243,1982558..1982702,1983643..1983752,1983973..1984100,1984883..1985943)
location: region:1960625-1985943:1
so has part: feature:1960625-1960863:1:exon
so has part: feature:1968803-1968864:1:exon
so has part: feature:1969976-1970035:1:exon
so has part: feature:1970956-1971124:1:exon
so has part: feature:1971512-1971655:1:exon
so has part: feature:1972178-1972333:1:exon
so has part: feature:1972566-1972734:1:exon
so has part: feature:1976530-1976674:1:exon
so has part: feature:1976885-1977059:1:exon
so has part: feature:1977849-1978021:1:exon
so has part: feature:1978500-1978871:1:exon
so has part: feature:1980014-1980137:1:exon
so has part: feature:1980959-1981170:1:exon
so has part: feature:1981562-1981668:1:exon
so has part: feature:1982083-1982243:1:exon
so has part: feature:1982558-1982702:1:exon
so has part: feature:1983643-1983752:1:exon
so has part: feature:1983973-1984100:1:exon
so has part: feature:1984883-1985943:1:exon

position:1960625:1
position: 1960625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1960625-1960863:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1968803-1968864:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1969976-1970035:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1970956-1971124:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1971512-1971655:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1972178-1972333:1:exon

position:1972333:1
position: 1972333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1972566-1972734:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1976530-1976674:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1976885-1977059:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1977849-1978021:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1978500-1978871:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1980014-1980137:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1980959-1981170:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1981562-1981668:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1982083-1982243:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1982558-1982702:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1983643-1983752:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1983973-1984100:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1984883-1985943:1:exon

LARP1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LARP1B
product: La ribonucleoprotein domain family member 1B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030450863.1
SIO_010081: LARP1B
subclass of: SO_0000673
so part of: LARP1B
location: join(1960625..1960863,1968803..1968864,1969976..1970035,1970956..1971124,1971512..1971655,1972178..1972333,1972566..1972734,1976530..1976674,1976885..1977059,1977849..1978021,1978500..1978871,1980014..1980137,1980959..1981170,1981562..1981668,1982083..1982243,1982558..1982702,1983643..1983752,1983973..1984100,1984883..1984931,1985240..1985943)
location: region:1960625-1985943:1
so has part: feature:1960625-1960863:1:exon
so has part: feature:1968803-1968864:1:exon
so has part: feature:1969976-1970035:1:exon
so has part: feature:1970956-1971124:1:exon
so has part: feature:1971512-1971655:1:exon
so has part: feature:1972178-1972333:1:exon
so has part: feature:1972566-1972734:1:exon
so has part: feature:1976530-1976674:1:exon
so has part: feature:1976885-1977059:1:exon
so has part: feature:1977849-1978021:1:exon
so has part: feature:1978500-1978871:1:exon
so has part: feature:1980014-1980137:1:exon
so has part: feature:1980959-1981170:1:exon
so has part: feature:1981562-1981668:1:exon
so has part: feature:1982083-1982243:1:exon
so has part: feature:1982558-1982702:1:exon
so has part: feature:1983643-1983752:1:exon
so has part: feature:1983973-1984100:1:exon
so has part: feature:1984883-1984931:1:exon
so has part: feature:1985240-1985943:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1960625-1960863:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1968803-1968864:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1969976-1970035:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1970956-1971124:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1971512-1971655:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1972178-1972333:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1972566-1972734:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1976530-1976674:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1976885-1977059:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1977849-1978021:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1978500-1978871:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1980014-1980137:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1980959-1981170:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1981562-1981668:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1982083-1982243:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1982558-1982702:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1983643-1983752:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1983973-1984100:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1984883-1984931:1:exon

position:1984931:1
position: 1984931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1985240-1985943:1:exon

position:1985240:1
position: 1985240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LARP1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LARP1B
product: La ribonucleoprotein domain family member 1B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030450862.1
SIO_010081: LARP1B
subclass of: SO_0000673
so part of: LARP1B
location: join(1960625..1960863,1968803..1968864,1969976..1970035,1970956..1971124,1971512..1971655,1972178..1972333,1972566..1972734,1976530..1976674,1976885..1977059,1977849..1978021,1978500..1978871,1980014..1980137,1980959..1981170,1981562..1981668,1982086..1982243,1982558..1982702,1983643..1983752,1983973..1984100,1984883..1985943)
location: region:1960625-1985943:1
so has part: feature:1960625-1960863:1:exon
so has part: feature:1968803-1968864:1:exon
so has part: feature:1969976-1970035:1:exon
so has part: feature:1970956-1971124:1:exon
so has part: feature:1971512-1971655:1:exon
so has part: feature:1972178-1972333:1:exon
so has part: feature:1972566-1972734:1:exon
so has part: feature:1976530-1976674:1:exon
so has part: feature:1976885-1977059:1:exon
so has part: feature:1977849-1978021:1:exon
so has part: feature:1978500-1978871:1:exon
so has part: feature:1980014-1980137:1:exon
so has part: feature:1980959-1981170:1:exon
so has part: feature:1981562-1981668:1:exon
so has part: feature:1982086-1982243:1:exon
so has part: feature:1982558-1982702:1:exon
so has part: feature:1983643-1983752:1:exon
so has part: feature:1983973-1984100:1:exon
so has part: feature:1984883-1985943:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1960625-1960863:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1968803-1968864:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1969976-1970035:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1970956-1971124:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1971512-1971655:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1972178-1972333:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1972566-1972734:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1976530-1976674:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1976885-1977059:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1977849-1978021:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1978500-1978871:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1980014-1980137:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1980959-1981170:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1981562-1981668:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1982086-1982243:1:exon

position:1982086:1
position: 1982086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1982558-1982702:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1983643-1983752:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1983973-1984100:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1984883-1985943:1:exon

LARP1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LARP1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 1B isoform X3
translation: MQRMNFEYSVGYQELYGEGTDQVFQPELNASIMYYYGDGTGVQMYSVDETLLKEYIKHQIEYYFSTENLERDFFLRRKMDQQGFLPVSLIASFRRMQALTTNAALILEALKDSTEVETVDQRIRKRVDPEKWPIPGPPPCSLPPTDFSRLINCPEFIPGQVFGSHTESAPSSPRMGSPLSPKENTERSNFQTMSKGLSTSLPDLDSEPWIEVKKRHRASTVKKKGSVPTPEQTPDQQQPPPPPEEQEQEELDFLFDEEMEQMQSQKSKFTDWSDSDSDYEIDDQDVNKILIVTQTPPYMRKHSGGDRTGNHVVRAKITSELAKVINDGLYYYEQDLWMVQSANDTMMKQEIENFKKLNLISKEEFDNLAPEQIADPTQEVPPGPPGLRKDLADELACNSMSTEVPPTTAVARSLPTAVPDPPCVHPGFTLRTPRTPRLQDPNKTPRFYPVVKEARAIDMKTPRKRKTRHSTNPPLECHVGWVMDSRDHRSRTSSVSSSNASPSEGAPLAGGYGCTPNSLPKFQHPSHELLKENGFTQQVYHKYRRRCLMERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALDDAKEHYRYGLECLFRFYSYGLEKKFRQEIFKDFQEETKRDYEAGQLYGLEKFWAYLKYAQHKTPAIDPKLQEYLSNFKRLEDFRVDPPISEESGRKRPVAATEHLP
SIO_010081: LARP1B
subclass of: SO_0000673
so part of: LARP1B
location: join(1972324..1972333,1972566..1972734,1976530..1976674,1976885..1977059,1977849..1978021,1978500..1978871,1980014..1980137,1980959..1981170,1981562..1981668,1982083..1982243,1982558..1982702,1983643..1983752,1983973..1984100,1984883..1984931,1985240..1985253)
location: region:1972324-1985253:1
so has part: feature:1972324-1972333:1:exon
so has part: feature:1972566-1972734:1:exon
so has part: feature:1976530-1976674:1:exon
so has part: feature:1976885-1977059:1:exon
so has part: feature:1977849-1978021:1:exon
so has part: feature:1978500-1978871:1:exon
so has part: feature:1980014-1980137:1:exon
so has part: feature:1980959-1981170:1:exon
so has part: feature:1981562-1981668:1:exon
so has part: feature:1982083-1982243:1:exon
so has part: feature:1982558-1982702:1:exon
so has part: feature:1983643-1983752:1:exon
so has part: feature:1983973-1984100:1:exon
so has part: feature:1984883-1984931:1:exon
so has part: feature:1985240-1985253:1:exon

XP_030306723.1
type: Protein
SIO_000068: ncbiprotein

position:1972324:1
position: 1972324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1985253:1
position: 1985253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1972324-1972333:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1972566-1972734:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1976530-1976674:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1976885-1977059:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1977849-1978021:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1978500-1978871:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1980014-1980137:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1980959-1981170:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1981562-1981668:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1982083-1982243:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1982558-1982702:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1983643-1983752:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1983973-1984100:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1984883-1984931:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1985240-1985253:1:exon

LARP1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LARP1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 1B isoform X1
translation: MQRMNFEYSVGYQELYGEGTDQVFQPELNASIMYYYGDGTGVQMYSVDETLLKEYIKHQIEYYFSTENLERDFFLRRKMDQQGFLPVSLIASFRRMQALTTNAALILEALKDSTEVETVDQRIRKRVDPEKWPIPGPPPCSLPPTDFSRLINCPEFIPGQVFGSHTESAPSSPRMGSPLSPKENTERSNFQTMSKGLSTSLPDLDSEPWIEVKKRHRASTVKKKGSVPTPEQTPDQQQPPPPPEEQEQEELDFLFDEEMEQMQSQKSKFTDWSDSDSDYEIDDQDVNKILIVTQTPPYMRKHSGGDRTGNHVVRAKITSELAKVINDGLYYYEQDLWMVQSANDTMMKQEIENFKKLNLISKEEFDNLAPEQIADPTQEVPPGPPGLRKDLADELACNSMSTEVPPTTAVARSLPTAVPDPPCVHPGFTLRTPRTPRLQDPNKTPRFYPVVKEARAIDMKTPRKRKTRHSTNPPLECHVGWVMDSRDHRSRTSSVSSSNASPSEGAPLAGGYGCTPNSLPKFQHPSHELLKENGFTQQVYHKYRRRCLMERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALDDAKEHYRYGLECLFRFYSYGLEKKFRQEIFKDFQEETKRDYEAGQLYGLEKFWAYLKYAQHKTPAIDPKLQEYLSNFKRLEDFRVDPPISEESGRKRPVAATGEDLGHHKQQSSFSKTLLVAACQTQALGSVTSGNTVQASRGHKNAARKSIESDVPEK
SIO_010081: LARP1B
subclass of: SO_0000673
so part of: LARP1B
location: join(1972324..1972333,1972566..1972734,1976530..1976674,1976885..1977059,1977849..1978021,1978500..1978871,1980014..1980137,1980959..1981170,1981562..1981668,1982083..1982243,1982558..1982702,1983643..1983752,1983973..1984100,1984883..1985104)
location: region:1972324-1985104:1
so has part: feature:1972324-1972333:1:exon
so has part: feature:1972566-1972734:1:exon
so has part: feature:1976530-1976674:1:exon
so has part: feature:1976885-1977059:1:exon
so has part: feature:1977849-1978021:1:exon
so has part: feature:1978500-1978871:1:exon
so has part: feature:1980014-1980137:1:exon
so has part: feature:1980959-1981170:1:exon
so has part: feature:1981562-1981668:1:exon
so has part: feature:1982083-1982243:1:exon
so has part: feature:1982558-1982702:1:exon
so has part: feature:1983643-1983752:1:exon
so has part: feature:1983973-1984100:1:exon
so has part: feature:1984883-1985104:1:exon

XP_030306721.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1972324-1972333:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1972566-1972734:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1976530-1976674:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1976885-1977059:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1977849-1978021:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1978500-1978871:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1980014-1980137:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1980959-1981170:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1981562-1981668:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1982083-1982243:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1982558-1982702:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1983643-1983752:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1983973-1984100:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1984883-1985104:1:exon

LARP1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LARP1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 1B isoform X2
translation: MQRMNFEYSVGYQELYGEGTDQVFQPELNASIMYYYGDGTGVQMYSVDETLLKEYIKHQIEYYFSTENLERDFFLRRKMDQQGFLPVSLIASFRRMQALTTNAALILEALKDSTEVETVDQRIRKRVDPEKWPIPGPPPCSLPPTDFSRLINCPEFIPGQVFGSHTESAPSSPRMGSPLSPKENTERSNFQTMSKGLSTSLPDLDSEPWIEVKKRHRASTVKKKGSVPTPEQTPDQQQPPPPPEEQEQEELDFLFDEEMEQMQSQKSKFTDWSDSDSDYEIDDQDVNKILIVTQTPPYMRKHSGGDRTGNHVVRAKITSELAKVINDGLYYYEQDLWMVQSANDTMMKQEIENFKKLNLISKEEFDNLAPEQIADPTQEVPPGPPGLRKDLADELACNSMSTEVPPTTAVARSLPTAVPDPPCVHPGFTLRTPRTPRLQDPNKTPRFYPVVKEARAIDMKTPRKRKTRHSTNPPLECHVGWVMDSRDHRSRTSSVSSNASPSEGAPLAGGYGCTPNSLPKFQHPSHELLKENGFTQQVYHKYRRRCLMERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALDDAKEHYRYGLECLFRFYSYGLEKKFRQEIFKDFQEETKRDYEAGQLYGLEKFWAYLKYAQHKTPAIDPKLQEYLSNFKRLEDFRVDPPISEESGRKRPVAATGEDLGHHKQQSSFSKTLLVAACQTQALGSVTSGNTVQASRGHKNAARKSIESDVPEK
SIO_010081: LARP1B
subclass of: SO_0000673
so part of: LARP1B
location: join(1972324..1972333,1972566..1972734,1976530..1976674,1976885..1977059,1977849..1978021,1978500..1978871,1980014..1980137,1980959..1981170,1981562..1981668,1982086..1982243,1982558..1982702,1983643..1983752,1983973..1984100,1984883..1985104)
location: region:1972324-1985104:1
so has part: feature:1972324-1972333:1:exon
so has part: feature:1972566-1972734:1:exon
so has part: feature:1976530-1976674:1:exon
so has part: feature:1976885-1977059:1:exon
so has part: feature:1977849-1978021:1:exon
so has part: feature:1978500-1978871:1:exon
so has part: feature:1980014-1980137:1:exon
so has part: feature:1980959-1981170:1:exon
so has part: feature:1981562-1981668:1:exon
so has part: feature:1982086-1982243:1:exon
so has part: feature:1982558-1982702:1:exon
so has part: feature:1983643-1983752:1:exon
so has part: feature:1983973-1984100:1:exon
so has part: feature:1984883-1985104:1:exon

XP_030306722.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1972324-1972333:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1972566-1972734:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1976530-1976674:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1976885-1977059:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1977849-1978021:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1978500-1978871:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1980014-1980137:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1980959-1981170:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1981562-1981668:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1982086-1982243:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1982558-1982702:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1983643-1983752:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1983973-1984100:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1984883-1985104:1:exon

LARP1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LARP1B
product: La ribonucleoprotein domain family member 1B, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030450865.1
SIO_010081: LARP1B
subclass of: SO_0000673
so part of: LARP1B
location: join(1973539..1973754,1976530..1976674,1976885..1977059,1977849..1978021,1978500..1978871,1980014..1980137,1980959..1981170,1981562..1981668,1982083..1982243,1982558..1982702,1983643..1983752,1983973..1984100,1984883..1985943)
location: region:1973539-1985943:1
so has part: feature:1973539-1973754:1:exon
so has part: feature:1976530-1976674:1:exon
so has part: feature:1976885-1977059:1:exon
so has part: feature:1977849-1978021:1:exon
so has part: feature:1978500-1978871:1:exon
so has part: feature:1980014-1980137:1:exon
so has part: feature:1980959-1981170:1:exon
so has part: feature:1981562-1981668:1:exon
so has part: feature:1982083-1982243:1:exon
so has part: feature:1982558-1982702:1:exon
so has part: feature:1983643-1983752:1:exon
so has part: feature:1983973-1984100:1:exon
so has part: feature:1984883-1985943:1:exon

position:1973539:1
position: 1973539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1973539-1973754:1:exon

position:1973754:1
position: 1973754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1976530-1976674:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1976885-1977059:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1977849-1978021:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1978500-1978871:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1980014-1980137:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1980959-1981170:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1981562-1981668:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1982083-1982243:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1982558-1982702:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1983643-1983752:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1983973-1984100:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1984883-1985943:1:exon

LARP1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: LARP1B
product: La ribonucleoprotein domain family member 1B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030450864.1
SIO_010081: LARP1B
subclass of: SO_0000673
so part of: LARP1B
location: join(1976151..1976207,1976530..1976674,1976885..1977059,1977849..1978021,1978500..1978871,1980014..1980137,1980959..1981170,1981562..1981668,1982083..1982243,1982558..1982702,1983643..1983752,1983973..1984100,1984883..1985943)
location: region:1976151-1985943:1
so has part: feature:1976151-1976207:1:exon
so has part: feature:1976530-1976674:1:exon
so has part: feature:1976885-1977059:1:exon
so has part: feature:1977849-1978021:1:exon
so has part: feature:1978500-1978871:1:exon
so has part: feature:1980014-1980137:1:exon
so has part: feature:1980959-1981170:1:exon
so has part: feature:1981562-1981668:1:exon
so has part: feature:1982083-1982243:1:exon
so has part: feature:1982558-1982702:1:exon
so has part: feature:1983643-1983752:1:exon
so has part: feature:1983973-1984100:1:exon
so has part: feature:1984883-1985943:1:exon

position:1976151:1
position: 1976151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1976151-1976207:1:exon

position:1976207:1
position: 1976207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1976530-1976674:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1976885-1977059:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1977849-1978021:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1978500-1978871:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1980014-1980137:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1980959-1981170:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1981562-1981668:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1982083-1982243:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1982558-1982702:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1983643-1983752:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1983973-1984100:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1984883-1985943:1:exon

LARP1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LARP1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 1B isoform X4
translation: MDQQGFLPVSLIASFRRMQALTTNAALILEALKDSTEVETVDQRIRKRVDPEKWPIPGPPPCSLPPTDFSRLINCPEFIPGQVFGSHTESAPSSPRMGSPLSPKENTERSNFQTMSKGLSTSLPDLDSEPWIEVKKRHRASTVKKKGSVPTPEQTPDQQQPPPPPEEQEQEELDFLFDEEMEQMQSQKSKFTDWSDSDSDYEIDDQDVNKILIVTQTPPYMRKHSGGDRTGNHVVRAKITSELAKVINDGLYYYEQDLWMVQSANDTMMKQEIENFKKLNLISKEEFDNLAPEQIADPTQEVPPGPPGLRKDLADELACNSMSTEVPPTTAVARSLPTAVPDPPCVHPGFTLRTPRTPRLQDPNKTPRFYPVVKEARAIDMKTPRKRKTRHSTNPPLECHVGWVMDSRDHRSRTSSVSSSNASPSEGAPLAGGYGCTPNSLPKFQHPSHELLKENGFTQQVYHKYRRRCLMERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALDDAKEHYRYGLECLFRFYSYGLEKKFRQEIFKDFQEETKRDYEAGQLYGLEKFWAYLKYAQHKTPAIDPKLQEYLSNFKRLEDFRVDPPISEESGRKRPVAATGEDLGHHKQQSSFSKTLLVAACQTQALGSVTSGNTVQASRGHKNAARKSIESDVPEK
SIO_010081: LARP1B
subclass of: SO_0000673
so part of: LARP1B
location: join(1976585..1976674,1976885..1977059,1977849..1978021,1978500..1978871,1980014..1980137,1980959..1981170,1981562..1981668,1982083..1982243,1982558..1982702,1983643..1983752,1983973..1984100,1984883..1985104)
location: region:1976585-1985104:1
so has part: feature:1976585-1976674:1:exon
so has part: feature:1976885-1977059:1:exon
so has part: feature:1977849-1978021:1:exon
so has part: feature:1978500-1978871:1:exon
so has part: feature:1980014-1980137:1:exon
so has part: feature:1980959-1981170:1:exon
so has part: feature:1981562-1981668:1:exon
so has part: feature:1982083-1982243:1:exon
so has part: feature:1982558-1982702:1:exon
so has part: feature:1983643-1983752:1:exon
so has part: feature:1983973-1984100:1:exon
so has part: feature:1984883-1985104:1:exon

XP_030306724.1
type: Protein
SIO_000068: ncbiprotein

position:1976585:1
position: 1976585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1976585-1976674:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1976885-1977059:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1977849-1978021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1978500-1978871:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1980014-1980137:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1980959-1981170:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1981562-1981668:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1982083-1982243:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1982558-1982702:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1983643-1983752:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1983973-1984100:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1984883-1985104:1:exon

LARP1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: LARP1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 1B isoform X4
translation: MDQQGFLPVSLIASFRRMQALTTNAALILEALKDSTEVETVDQRIRKRVDPEKWPIPGPPPCSLPPTDFSRLINCPEFIPGQVFGSHTESAPSSPRMGSPLSPKENTERSNFQTMSKGLSTSLPDLDSEPWIEVKKRHRASTVKKKGSVPTPEQTPDQQQPPPPPEEQEQEELDFLFDEEMEQMQSQKSKFTDWSDSDSDYEIDDQDVNKILIVTQTPPYMRKHSGGDRTGNHVVRAKITSELAKVINDGLYYYEQDLWMVQSANDTMMKQEIENFKKLNLISKEEFDNLAPEQIADPTQEVPPGPPGLRKDLADELACNSMSTEVPPTTAVARSLPTAVPDPPCVHPGFTLRTPRTPRLQDPNKTPRFYPVVKEARAIDMKTPRKRKTRHSTNPPLECHVGWVMDSRDHRSRTSSVSSSNASPSEGAPLAGGYGCTPNSLPKFQHPSHELLKENGFTQQVYHKYRRRCLMERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALDDAKEHYRYGLECLFRFYSYGLEKKFRQEIFKDFQEETKRDYEAGQLYGLEKFWAYLKYAQHKTPAIDPKLQEYLSNFKRLEDFRVDPPISEESGRKRPVAATGEDLGHHKQQSSFSKTLLVAACQTQALGSVTSGNTVQASRGHKNAARKSIESDVPEK
SIO_010081: LARP1B
subclass of: SO_0000673
so part of: LARP1B
location: join(1976585..1976674,1976885..1977059,1977849..1978021,1978500..1978871,1980014..1980137,1980959..1981170,1981562..1981668,1982083..1982243,1982558..1982702,1983643..1983752,1983973..1984100,1984883..1985104)
location: region:1976585-1985104:1
so has part: feature:1976585-1976674:1:exon
so has part: feature:1976885-1977059:1:exon
so has part: feature:1977849-1978021:1:exon
so has part: feature:1978500-1978871:1:exon
so has part: feature:1980014-1980137:1:exon
so has part: feature:1980959-1981170:1:exon
so has part: feature:1981562-1981668:1:exon
so has part: feature:1982083-1982243:1:exon
so has part: feature:1982558-1982702:1:exon
so has part: feature:1983643-1983752:1:exon
so has part: feature:1983973-1984100:1:exon
so has part: feature:1984883-1985104:1:exon

XP_030306725.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1976585-1976674:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1976885-1977059:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1977849-1978021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1978500-1978871:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1980014-1980137:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1980959-1981170:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1981562-1981668:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1982083-1982243:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1982558-1982702:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1983643-1983752:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1983973-1984100:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1984883-1985104:1:exon

PGRMC2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PGRMC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1989312..2001412)
location: region:1989312-2001412:-1
so has part: feature:1989312-2001412:-1:exon
subclass of: SO_0000010

103537001
type: Gene
SIO_000068: ncbigene

position:1989312:-1
position: 1989312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2001412:-1
position: 2001412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1989312-2001412:-1:exon

PGRMC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PGRMC2
product: progesterone receptor membrane component 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 38 ESTs, 2 long SRA reads, 11 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_030450867.1
SIO_010081: PGRMC2
subclass of: SO_0000673
so part of: PGRMC2
location: complement(join(1989312..1990331,1991055..1991210,2001039..2001412))
location: region:1989312-2001412:-1
so has part: feature:2001039-2001412:-1:exon
so has part: feature:1991055-1991210:-1:exon
so has part: feature:1989312-1990331:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2001039-2001412:-1:exon

position:2001039:-1
position: 2001039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1991055-1991210:-1:exon

position:1991055:-1
position: 1991055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1991210:-1
position: 1991210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1989312-1990331:-1:exon

position:1990331:-1
position: 1990331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PGRMC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PGRMC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-associated progesterone receptor component 2
translation: MADDGDGRLRTEGSGGSGAGGLPVGEMLLNVGLLALALLAAYRLYLRWGTRSGPGGAARQSQAAALPRMKRRDFSLEQLREFDGARDPRILLAVNGKVFDVTKGSKFYGPDGPYGIFAGRDASRGLATFCLDKDALRDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRLLKPGEEPSEYTDEEDTKDHTKQE
SIO_010081: PGRMC2
subclass of: SO_0000673
so part of: PGRMC2
location: complement(join(1990234..1990331,1991055..1991210,2001039..2001369))
location: region:1990234-2001369:-1
so has part: feature:2001039-2001369:-1:exon
so has part: feature:1991055-1991210:-1:exon
so has part: feature:1990234-1990331:-1:exon

XP_030306727.1
type: Protein
SIO_000068: ncbiprotein

position:1990234:-1
position: 1990234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2001369:-1
position: 2001369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2001039-2001369:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1991055-1991210:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1990234-1990331:-1:exon

LOC115598320
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115598320
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2001655..2008895
location: region:2001655-2008895:1
so has part: feature:2001655-2008895:1:exon
subclass of: SO_0000011

115598320
type: Gene
SIO_000068: ncbigene

position:2001655:1
position: 2001655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2008895:1
position: 2008895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2001655-2008895:1:exon

LOC115598320
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115598320
product: uncharacterized LOC115598320
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003987568.1
SIO_010081: LOC115598320
subclass of: SO_0000673
so part of: LOC115598320
location: join(2001655..2002118,2008289..2008439,2008807..2008895)
location: region:2001655-2008895:1
so has part: feature:2001655-2002118:1:exon
so has part: feature:2008289-2008439:1:exon
so has part: feature:2008807-2008895:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2001655-2002118:1:exon

position:2002118:1
position: 2002118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2008289-2008439:1:exon

position:2008289:1
position: 2008289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2008439:1
position: 2008439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2008807-2008895:1:exon

position:2008807:1
position: 2008807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

JADE1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: JADE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2072294..2110590
location: region:2072294-2110590:1
so has part: feature:2072294-2110590:1:exon
subclass of: SO_0000010

103537000
type: Gene
SIO_000068: ncbigene

position:2072294:1
position: 2072294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2110590:1
position: 2110590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2072294-2110590:1:exon

JADE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: JADE1
product: jade family PHD finger 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030450794.1
SIO_010081: JADE1
subclass of: SO_0000673
so part of: JADE1
location: join(2072294..2072571,2081767..2081844,2089261..2089320,2089403..2089485,2092837..2092994,2096557..2096744,2098095..2098306,2099712..2099879,2100462..2100578,2104082..2104612,2105883..2106000,2106888..2110590)
location: region:2072294-2110590:1
so has part: feature:2072294-2072571:1:exon
so has part: feature:2081767-2081844:1:exon
so has part: feature:2089261-2089320:1:exon
so has part: feature:2089403-2089485:1:exon
so has part: feature:2092837-2092994:1:exon
so has part: feature:2096557-2096744:1:exon
so has part: feature:2098095-2098306:1:exon
so has part: feature:2099712-2099879:1:exon
so has part: feature:2100462-2100578:1:exon
so has part: feature:2104082-2104612:1:exon
so has part: feature:2105883-2106000:1:exon
so has part: feature:2106888-2110590:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2072294-2072571:1:exon

position:2072571:1
position: 2072571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2081767-2081844:1:exon

position:2081767:1
position: 2081767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2081844:1
position: 2081844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2089261-2089320:1:exon

position:2089261:1
position: 2089261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2089320:1
position: 2089320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2089403-2089485:1:exon

position:2089403:1
position: 2089403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2089485:1
position: 2089485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2092837-2092994:1:exon

position:2092837:1
position: 2092837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2092994:1
position: 2092994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2096557-2096744:1:exon

position:2096557:1
position: 2096557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2096744:1
position: 2096744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2098095-2098306:1:exon

position:2098095:1
position: 2098095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2098306:1
position: 2098306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2099712-2099879:1:exon

position:2099712:1
position: 2099712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2099879:1
position: 2099879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2100462-2100578:1:exon

position:2100462:1
position: 2100462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2100578:1
position: 2100578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2104082-2104612:1:exon

position:2104082:1
position: 2104082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2104612:1
position: 2104612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2105883-2106000:1:exon

position:2105883:1
position: 2105883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2106000:1
position: 2106000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2106888-2110590:1:exon

position:2106888:1
position: 2106888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

JADE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: JADE1
product: jade family PHD finger 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030450795.1
SIO_010081: JADE1
subclass of: SO_0000673
so part of: JADE1
location: join(2072306..2072571,2081767..2081844,2089403..2089485,2092837..2092994,2096557..2096744,2098095..2098306,2099712..2099879,2100462..2100578,2104082..2104612,2105883..2106000,2106888..2110590)
location: region:2072306-2110590:1
so has part: feature:2072306-2072571:1:exon
so has part: feature:2081767-2081844:1:exon
so has part: feature:2089403-2089485:1:exon
so has part: feature:2092837-2092994:1:exon
so has part: feature:2096557-2096744:1:exon
so has part: feature:2098095-2098306:1:exon
so has part: feature:2099712-2099879:1:exon
so has part: feature:2100462-2100578:1:exon
so has part: feature:2104082-2104612:1:exon
so has part: feature:2105883-2106000:1:exon
so has part: feature:2106888-2110590:1:exon

position:2072306:1
position: 2072306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2072306-2072571:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2081767-2081844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2089403-2089485:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2092837-2092994:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2096557-2096744:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2098095-2098306:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2099712-2099879:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2100462-2100578:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2104082-2104612:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2105883-2106000:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2106888-2110590:1:exon

JADE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: JADE1
product: jade family PHD finger 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030450789.1
SIO_010081: JADE1
subclass of: SO_0000673
so part of: JADE1
location: join(2072603..2072921,2081767..2081844,2089261..2089320,2089403..2089485,2092837..2092994,2096557..2096744,2098095..2098306,2099712..2099879,2100462..2100578,2104082..2104612,2105883..2106000,2106888..2110590)
location: region:2072603-2110590:1
so has part: feature:2072603-2072921:1:exon
so has part: feature:2081767-2081844:1:exon
so has part: feature:2089261-2089320:1:exon
so has part: feature:2089403-2089485:1:exon
so has part: feature:2092837-2092994:1:exon
so has part: feature:2096557-2096744:1:exon
so has part: feature:2098095-2098306:1:exon
so has part: feature:2099712-2099879:1:exon
so has part: feature:2100462-2100578:1:exon
so has part: feature:2104082-2104612:1:exon
so has part: feature:2105883-2106000:1:exon
so has part: feature:2106888-2110590:1:exon

position:2072603:1
position: 2072603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2072603-2072921:1:exon

position:2072921:1
position: 2072921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2081767-2081844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2089261-2089320:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2089403-2089485:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2092837-2092994:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2096557-2096744:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2098095-2098306:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2099712-2099879:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2100462-2100578:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2104082-2104612:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2105883-2106000:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2106888-2110590:1:exon

JADE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: JADE1
product: jade family PHD finger 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030450792.1
SIO_010081: JADE1
subclass of: SO_0000673
so part of: JADE1
location: join(2072605..2072921,2081767..2081844,2089403..2089485,2092837..2092994,2096557..2096744,2098095..2098306,2099712..2099879,2100462..2100578,2104082..2104612,2105883..2106000,2106888..2110590)
location: region:2072605-2110590:1
so has part: feature:2072605-2072921:1:exon
so has part: feature:2081767-2081844:1:exon
so has part: feature:2089403-2089485:1:exon
so has part: feature:2092837-2092994:1:exon
so has part: feature:2096557-2096744:1:exon
so has part: feature:2098095-2098306:1:exon
so has part: feature:2099712-2099879:1:exon
so has part: feature:2100462-2100578:1:exon
so has part: feature:2104082-2104612:1:exon
so has part: feature:2105883-2106000:1:exon
so has part: feature:2106888-2110590:1:exon

position:2072605:1
position: 2072605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2072605-2072921:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2081767-2081844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2089403-2089485:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2092837-2092994:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2096557-2096744:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2098095-2098306:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2099712-2099879:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2100462-2100578:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2104082-2104612:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2105883-2106000:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2106888-2110590:1:exon

JADE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: JADE1
product: jade family PHD finger 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030450791.1
SIO_010081: JADE1
subclass of: SO_0000673
so part of: JADE1
location: join(2073267..2073487,2081767..2081844,2089261..2089320,2089403..2089485,2092837..2092994,2096557..2096744,2098095..2098306,2099712..2099879,2100462..2100578,2104082..2104612,2105883..2106000,2106888..2110590)
location: region:2073267-2110590:1
so has part: feature:2073267-2073487:1:exon
so has part: feature:2081767-2081844:1:exon
so has part: feature:2089261-2089320:1:exon
so has part: feature:2089403-2089485:1:exon
so has part: feature:2092837-2092994:1:exon
so has part: feature:2096557-2096744:1:exon
so has part: feature:2098095-2098306:1:exon
so has part: feature:2099712-2099879:1:exon
so has part: feature:2100462-2100578:1:exon
so has part: feature:2104082-2104612:1:exon
so has part: feature:2105883-2106000:1:exon
so has part: feature:2106888-2110590:1:exon

position:2073267:1
position: 2073267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2073267-2073487:1:exon

position:2073487:1
position: 2073487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2081767-2081844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2089261-2089320:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2089403-2089485:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2092837-2092994:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2096557-2096744:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2098095-2098306:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2099712-2099879:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2100462-2100578:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2104082-2104612:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2105883-2106000:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2106888-2110590:1:exon

JADE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: JADE1
product: jade family PHD finger 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030450790.1
SIO_010081: JADE1
subclass of: SO_0000673
so part of: JADE1
location: join(2073557..2074668,2081767..2081844,2089261..2089320,2089403..2089485,2092837..2092994,2096557..2096744,2098095..2098306,2099712..2099879,2100462..2100578,2104082..2104612,2105883..2106000,2106888..2110590)
location: region:2073557-2110590:1
so has part: feature:2073557-2074668:1:exon
so has part: feature:2081767-2081844:1:exon
so has part: feature:2089261-2089320:1:exon
so has part: feature:2089403-2089485:1:exon
so has part: feature:2092837-2092994:1:exon
so has part: feature:2096557-2096744:1:exon
so has part: feature:2098095-2098306:1:exon
so has part: feature:2099712-2099879:1:exon
so has part: feature:2100462-2100578:1:exon
so has part: feature:2104082-2104612:1:exon
so has part: feature:2105883-2106000:1:exon
so has part: feature:2106888-2110590:1:exon

position:2073557:1
position: 2073557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2073557-2074668:1:exon

position:2074668:1
position: 2074668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2081767-2081844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2089261-2089320:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2089403-2089485:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2092837-2092994:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2096557-2096744:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2098095-2098306:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2099712-2099879:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2100462-2100578:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2104082-2104612:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2105883-2106000:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2106888-2110590:1:exon

JADE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: JADE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Jade-1 isoform X1
translation: MKRRRVPSSSEDSDDNGMSLEGLSGSLSLPLFAHASKGLSTWSQHSRSRHRRTSCSRHEDRKPSEVFRTDLITAMKLHDSFQLNPDEYYVLADPWRQEWEKGVQVPVSPGTIPEPVARVVSETKAVTFTRPRKYIVSSGLEPPELGYVDIRTLADSVCRYDLNDVDVAWLQLANEEFKEMGMPELDEYTMERVMEEFEHRCYENMNHAIETEEGLGIEYDEDVVCDVCQSPDGEDGNEMVFCDKCNICVHQACYGILKVPEGSWLCRTCALGVQPKCLLCPKKGGAMKPTRSGTKWVHVSCALWIPEVSIGSPEKMEPITKVSHIPSSRWALVCSLCNEKVGASIQCSVKNCRTAFHVTCAFDRGLEMKTILAENDEVKFKSYCPKHSSTKKADEETFTESPGRENGTGIQDSSLPAHIDPFHSMGQNQEEAHRVSLRKQKLQQLEDEFYTFVEAAEVAQALRLPEEPVGFLYQYWKLKRKANFNKPLITPKKDEEDNLAKQEQDVLFRRLQLFTHLRQDLERVRNLTYMVTRREKIKRSVCKVQEQIFNMYTKQLEQERVSGVPSSFSLMENTVLFNSPSLGPNTPKIEDLKWHSAFFRKQMGASLTHSLKKPHKRDRVKSSSGNDSKSLLRQPSQKEGTAPPGSFLDFEKPFAETRVVSAQQKNGLVIPDHRKRRDNRPPCEMIKAELKEKTSKHNHKPLRPTELSQRQSENKRALNHSSGRSAPGTRRDLVPKCNGGLVRVNSNQTVVKVPTTPTSPVKNWGGFRIPKKGERQQQGESPEEPCHQNSSYPYLGVGRVSPKDRAKTKLKPDSENDGYSPDAEMSDSETEVADKKCRQQRLSPNSTISRRTDIIRRSIMAS
SIO_010081: JADE1
subclass of: SO_0000673
so part of: JADE1
location: join(2081793..2081844,2089261..2089320,2089403..2089485,2092837..2092994,2096557..2096744,2098095..2098306,2099712..2099879,2100462..2100578,2104082..2104612,2105883..2106000,2106888..2107789)
location: region:2081793-2107789:1
so has part: feature:2081793-2081844:1:exon
so has part: feature:2089261-2089320:1:exon
so has part: feature:2089403-2089485:1:exon
so has part: feature:2092837-2092994:1:exon
so has part: feature:2096557-2096744:1:exon
so has part: feature:2098095-2098306:1:exon
so has part: feature:2099712-2099879:1:exon
so has part: feature:2100462-2100578:1:exon
so has part: feature:2104082-2104612:1:exon
so has part: feature:2105883-2106000:1:exon
so has part: feature:2106888-2107789:1:exon

XP_030306649.1
type: Protein
SIO_000068: ncbiprotein

position:2081793:1
position: 2081793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2107789:1
position: 2107789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2081793-2081844:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2089261-2089320:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2089403-2089485:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2092837-2092994:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2096557-2096744:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2098095-2098306:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2099712-2099879:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2100462-2100578:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2104082-2104612:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2105883-2106000:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2106888-2107789:1:exon

JADE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: JADE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Jade-1 isoform X1
translation: MKRRRVPSSSEDSDDNGMSLEGLSGSLSLPLFAHASKGLSTWSQHSRSRHRRTSCSRHEDRKPSEVFRTDLITAMKLHDSFQLNPDEYYVLADPWRQEWEKGVQVPVSPGTIPEPVARVVSETKAVTFTRPRKYIVSSGLEPPELGYVDIRTLADSVCRYDLNDVDVAWLQLANEEFKEMGMPELDEYTMERVMEEFEHRCYENMNHAIETEEGLGIEYDEDVVCDVCQSPDGEDGNEMVFCDKCNICVHQACYGILKVPEGSWLCRTCALGVQPKCLLCPKKGGAMKPTRSGTKWVHVSCALWIPEVSIGSPEKMEPITKVSHIPSSRWALVCSLCNEKVGASIQCSVKNCRTAFHVTCAFDRGLEMKTILAENDEVKFKSYCPKHSSTKKADEETFTESPGRENGTGIQDSSLPAHIDPFHSMGQNQEEAHRVSLRKQKLQQLEDEFYTFVEAAEVAQALRLPEEPVGFLYQYWKLKRKANFNKPLITPKKDEEDNLAKQEQDVLFRRLQLFTHLRQDLERVRNLTYMVTRREKIKRSVCKVQEQIFNMYTKQLEQERVSGVPSSFSLMENTVLFNSPSLGPNTPKIEDLKWHSAFFRKQMGASLTHSLKKPHKRDRVKSSSGNDSKSLLRQPSQKEGTAPPGSFLDFEKPFAETRVVSAQQKNGLVIPDHRKRRDNRPPCEMIKAELKEKTSKHNHKPLRPTELSQRQSENKRALNHSSGRSAPGTRRDLVPKCNGGLVRVNSNQTVVKVPTTPTSPVKNWGGFRIPKKGERQQQGESPEEPCHQNSSYPYLGVGRVSPKDRAKTKLKPDSENDGYSPDAEMSDSETEVADKKCRQQRLSPNSTISRRTDIIRRSIMAS
SIO_010081: JADE1
subclass of: SO_0000673
so part of: JADE1
location: join(2081793..2081844,2089261..2089320,2089403..2089485,2092837..2092994,2096557..2096744,2098095..2098306,2099712..2099879,2100462..2100578,2104082..2104612,2105883..2106000,2106888..2107789)
location: region:2081793-2107789:1
so has part: feature:2081793-2081844:1:exon
so has part: feature:2089261-2089320:1:exon
so has part: feature:2089403-2089485:1:exon
so has part: feature:2092837-2092994:1:exon
so has part: feature:2096557-2096744:1:exon
so has part: feature:2098095-2098306:1:exon
so has part: feature:2099712-2099879:1:exon
so has part: feature:2100462-2100578:1:exon
so has part: feature:2104082-2104612:1:exon
so has part: feature:2105883-2106000:1:exon
so has part: feature:2106888-2107789:1:exon

XP_030306650.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2081793-2081844:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2089261-2089320:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2089403-2089485:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2092837-2092994:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2096557-2096744:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2098095-2098306:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2099712-2099879:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2100462-2100578:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2104082-2104612:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2105883-2106000:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2106888-2107789:1:exon

JADE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: JADE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Jade-1 isoform X1
translation: MKRRRVPSSSEDSDDNGMSLEGLSGSLSLPLFAHASKGLSTWSQHSRSRHRRTSCSRHEDRKPSEVFRTDLITAMKLHDSFQLNPDEYYVLADPWRQEWEKGVQVPVSPGTIPEPVARVVSETKAVTFTRPRKYIVSSGLEPPELGYVDIRTLADSVCRYDLNDVDVAWLQLANEEFKEMGMPELDEYTMERVMEEFEHRCYENMNHAIETEEGLGIEYDEDVVCDVCQSPDGEDGNEMVFCDKCNICVHQACYGILKVPEGSWLCRTCALGVQPKCLLCPKKGGAMKPTRSGTKWVHVSCALWIPEVSIGSPEKMEPITKVSHIPSSRWALVCSLCNEKVGASIQCSVKNCRTAFHVTCAFDRGLEMKTILAENDEVKFKSYCPKHSSTKKADEETFTESPGRENGTGIQDSSLPAHIDPFHSMGQNQEEAHRVSLRKQKLQQLEDEFYTFVEAAEVAQALRLPEEPVGFLYQYWKLKRKANFNKPLITPKKDEEDNLAKQEQDVLFRRLQLFTHLRQDLERVRNLTYMVTRREKIKRSVCKVQEQIFNMYTKQLEQERVSGVPSSFSLMENTVLFNSPSLGPNTPKIEDLKWHSAFFRKQMGASLTHSLKKPHKRDRVKSSSGNDSKSLLRQPSQKEGTAPPGSFLDFEKPFAETRVVSAQQKNGLVIPDHRKRRDNRPPCEMIKAELKEKTSKHNHKPLRPTELSQRQSENKRALNHSSGRSAPGTRRDLVPKCNGGLVRVNSNQTVVKVPTTPTSPVKNWGGFRIPKKGERQQQGESPEEPCHQNSSYPYLGVGRVSPKDRAKTKLKPDSENDGYSPDAEMSDSETEVADKKCRQQRLSPNSTISRRTDIIRRSIMAS
SIO_010081: JADE1
subclass of: SO_0000673
so part of: JADE1
location: join(2081793..2081844,2089261..2089320,2089403..2089485,2092837..2092994,2096557..2096744,2098095..2098306,2099712..2099879,2100462..2100578,2104082..2104612,2105883..2106000,2106888..2107789)
location: region:2081793-2107789:1
so has part: feature:2081793-2081844:1:exon
so has part: feature:2089261-2089320:1:exon
so has part: feature:2089403-2089485:1:exon
so has part: feature:2092837-2092994:1:exon
so has part: feature:2096557-2096744:1:exon
so has part: feature:2098095-2098306:1:exon
so has part: feature:2099712-2099879:1:exon
so has part: feature:2100462-2100578:1:exon
so has part: feature:2104082-2104612:1:exon
so has part: feature:2105883-2106000:1:exon
so has part: feature:2106888-2107789:1:exon

XP_030306651.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2081793-2081844:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2089261-2089320:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2089403-2089485:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2092837-2092994:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2096557-2096744:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2098095-2098306:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2099712-2099879:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2100462-2100578:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2104082-2104612:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2105883-2106000:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2106888-2107789:1:exon

JADE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: JADE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Jade-1 isoform X1
translation: MKRRRVPSSSEDSDDNGMSLEGLSGSLSLPLFAHASKGLSTWSQHSRSRHRRTSCSRHEDRKPSEVFRTDLITAMKLHDSFQLNPDEYYVLADPWRQEWEKGVQVPVSPGTIPEPVARVVSETKAVTFTRPRKYIVSSGLEPPELGYVDIRTLADSVCRYDLNDVDVAWLQLANEEFKEMGMPELDEYTMERVMEEFEHRCYENMNHAIETEEGLGIEYDEDVVCDVCQSPDGEDGNEMVFCDKCNICVHQACYGILKVPEGSWLCRTCALGVQPKCLLCPKKGGAMKPTRSGTKWVHVSCALWIPEVSIGSPEKMEPITKVSHIPSSRWALVCSLCNEKVGASIQCSVKNCRTAFHVTCAFDRGLEMKTILAENDEVKFKSYCPKHSSTKKADEETFTESPGRENGTGIQDSSLPAHIDPFHSMGQNQEEAHRVSLRKQKLQQLEDEFYTFVEAAEVAQALRLPEEPVGFLYQYWKLKRKANFNKPLITPKKDEEDNLAKQEQDVLFRRLQLFTHLRQDLERVRNLTYMVTRREKIKRSVCKVQEQIFNMYTKQLEQERVSGVPSSFSLMENTVLFNSPSLGPNTPKIEDLKWHSAFFRKQMGASLTHSLKKPHKRDRVKSSSGNDSKSLLRQPSQKEGTAPPGSFLDFEKPFAETRVVSAQQKNGLVIPDHRKRRDNRPPCEMIKAELKEKTSKHNHKPLRPTELSQRQSENKRALNHSSGRSAPGTRRDLVPKCNGGLVRVNSNQTVVKVPTTPTSPVKNWGGFRIPKKGERQQQGESPEEPCHQNSSYPYLGVGRVSPKDRAKTKLKPDSENDGYSPDAEMSDSETEVADKKCRQQRLSPNSTISRRTDIIRRSIMAS
SIO_010081: JADE1
subclass of: SO_0000673
so part of: JADE1
location: join(2081793..2081844,2089261..2089320,2089403..2089485,2092837..2092994,2096557..2096744,2098095..2098306,2099712..2099879,2100462..2100578,2104082..2104612,2105883..2106000,2106888..2107789)
location: region:2081793-2107789:1
so has part: feature:2081793-2081844:1:exon
so has part: feature:2089261-2089320:1:exon
so has part: feature:2089403-2089485:1:exon
so has part: feature:2092837-2092994:1:exon
so has part: feature:2096557-2096744:1:exon
so has part: feature:2098095-2098306:1:exon
so has part: feature:2099712-2099879:1:exon
so has part: feature:2100462-2100578:1:exon
so has part: feature:2104082-2104612:1:exon
so has part: feature:2105883-2106000:1:exon
so has part: feature:2106888-2107789:1:exon

XP_030306654.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2081793-2081844:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2089261-2089320:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2089403-2089485:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2092837-2092994:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2096557-2096744:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2098095-2098306:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2099712-2099879:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2100462-2100578:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2104082-2104612:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2105883-2106000:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2106888-2107789:1:exon

JADE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: JADE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Jade-1 isoform X2
translation: MKRRRVPSSSEDSDDNGSLSTWSQHSRSRHRRTSCSRHEDRKPSEVFRTDLITAMKLHDSFQLNPDEYYVLADPWRQEWEKGVQVPVSPGTIPEPVARVVSETKAVTFTRPRKYIVSSGLEPPELGYVDIRTLADSVCRYDLNDVDVAWLQLANEEFKEMGMPELDEYTMERVMEEFEHRCYENMNHAIETEEGLGIEYDEDVVCDVCQSPDGEDGNEMVFCDKCNICVHQACYGILKVPEGSWLCRTCALGVQPKCLLCPKKGGAMKPTRSGTKWVHVSCALWIPEVSIGSPEKMEPITKVSHIPSSRWALVCSLCNEKVGASIQCSVKNCRTAFHVTCAFDRGLEMKTILAENDEVKFKSYCPKHSSTKKADEETFTESPGRENGTGIQDSSLPAHIDPFHSMGQNQEEAHRVSLRKQKLQQLEDEFYTFVEAAEVAQALRLPEEPVGFLYQYWKLKRKANFNKPLITPKKDEEDNLAKQEQDVLFRRLQLFTHLRQDLERVRNLTYMVTRREKIKRSVCKVQEQIFNMYTKQLEQERVSGVPSSFSLMENTVLFNSPSLGPNTPKIEDLKWHSAFFRKQMGASLTHSLKKPHKRDRVKSSSGNDSKSLLRQPSQKEGTAPPGSFLDFEKPFAETRVVSAQQKNGLVIPDHRKRRDNRPPCEMIKAELKEKTSKHNHKPLRPTELSQRQSENKRALNHSSGRSAPGTRRDLVPKCNGGLVRVNSNQTVVKVPTTPTSPVKNWGGFRIPKKGERQQQGESPEEPCHQNSSYPYLGVGRVSPKDRAKTKLKPDSENDGYSPDAEMSDSETEVADKKCRQQRLSPNSTISRRTDIIRRSIMAS
SIO_010081: JADE1
subclass of: SO_0000673
so part of: JADE1
location: join(2081793..2081844,2089403..2089485,2092837..2092994,2096557..2096744,2098095..2098306,2099712..2099879,2100462..2100578,2104082..2104612,2105883..2106000,2106888..2107789)
location: region:2081793-2107789:1
so has part: feature:2081793-2081844:1:exon
so has part: feature:2089403-2089485:1:exon
so has part: feature:2092837-2092994:1:exon
so has part: feature:2096557-2096744:1:exon
so has part: feature:2098095-2098306:1:exon
so has part: feature:2099712-2099879:1:exon
so has part: feature:2100462-2100578:1:exon
so has part: feature:2104082-2104612:1:exon
so has part: feature:2105883-2106000:1:exon
so has part: feature:2106888-2107789:1:exon

XP_030306652.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2081793-2081844:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2089403-2089485:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2092837-2092994:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2096557-2096744:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2098095-2098306:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2099712-2099879:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2100462-2100578:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2104082-2104612:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2105883-2106000:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2106888-2107789:1:exon

JADE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: JADE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Jade-1 isoform X2
translation: MKRRRVPSSSEDSDDNGSLSTWSQHSRSRHRRTSCSRHEDRKPSEVFRTDLITAMKLHDSFQLNPDEYYVLADPWRQEWEKGVQVPVSPGTIPEPVARVVSETKAVTFTRPRKYIVSSGLEPPELGYVDIRTLADSVCRYDLNDVDVAWLQLANEEFKEMGMPELDEYTMERVMEEFEHRCYENMNHAIETEEGLGIEYDEDVVCDVCQSPDGEDGNEMVFCDKCNICVHQACYGILKVPEGSWLCRTCALGVQPKCLLCPKKGGAMKPTRSGTKWVHVSCALWIPEVSIGSPEKMEPITKVSHIPSSRWALVCSLCNEKVGASIQCSVKNCRTAFHVTCAFDRGLEMKTILAENDEVKFKSYCPKHSSTKKADEETFTESPGRENGTGIQDSSLPAHIDPFHSMGQNQEEAHRVSLRKQKLQQLEDEFYTFVEAAEVAQALRLPEEPVGFLYQYWKLKRKANFNKPLITPKKDEEDNLAKQEQDVLFRRLQLFTHLRQDLERVRNLTYMVTRREKIKRSVCKVQEQIFNMYTKQLEQERVSGVPSSFSLMENTVLFNSPSLGPNTPKIEDLKWHSAFFRKQMGASLTHSLKKPHKRDRVKSSSGNDSKSLLRQPSQKEGTAPPGSFLDFEKPFAETRVVSAQQKNGLVIPDHRKRRDNRPPCEMIKAELKEKTSKHNHKPLRPTELSQRQSENKRALNHSSGRSAPGTRRDLVPKCNGGLVRVNSNQTVVKVPTTPTSPVKNWGGFRIPKKGERQQQGESPEEPCHQNSSYPYLGVGRVSPKDRAKTKLKPDSENDGYSPDAEMSDSETEVADKKCRQQRLSPNSTISRRTDIIRRSIMAS
SIO_010081: JADE1
subclass of: SO_0000673
so part of: JADE1
location: join(2081793..2081844,2089403..2089485,2092837..2092994,2096557..2096744,2098095..2098306,2099712..2099879,2100462..2100578,2104082..2104612,2105883..2106000,2106888..2107789)
location: region:2081793-2107789:1
so has part: feature:2081793-2081844:1:exon
so has part: feature:2089403-2089485:1:exon
so has part: feature:2092837-2092994:1:exon
so has part: feature:2096557-2096744:1:exon
so has part: feature:2098095-2098306:1:exon
so has part: feature:2099712-2099879:1:exon
so has part: feature:2100462-2100578:1:exon
so has part: feature:2104082-2104612:1:exon
so has part: feature:2105883-2106000:1:exon
so has part: feature:2106888-2107789:1:exon

XP_030306655.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2081793-2081844:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2089403-2089485:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2092837-2092994:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2096557-2096744:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2098095-2098306:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2099712-2099879:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2100462-2100578:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2104082-2104612:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2105883-2106000:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2106888-2107789:1:exon

JADE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: JADE1
product: jade family PHD finger 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030450793.1
SIO_010081: JADE1
subclass of: SO_0000673
so part of: JADE1
location: join(2081828..2081844,2089261..2089320,2089403..2089485,2096557..2096744,2098095..2098306,2099712..2099879,2100462..2100578,2104082..2104612,2105883..2106000,2106888..2110590)
location: region:2081828-2110590:1
so has part: feature:2081828-2081844:1:exon
so has part: feature:2089261-2089320:1:exon
so has part: feature:2089403-2089485:1:exon
so has part: feature:2096557-2096744:1:exon
so has part: feature:2098095-2098306:1:exon
so has part: feature:2099712-2099879:1:exon
so has part: feature:2100462-2100578:1:exon
so has part: feature:2104082-2104612:1:exon
so has part: feature:2105883-2106000:1:exon
so has part: feature:2106888-2110590:1:exon

position:2081828:1
position: 2081828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2081828-2081844:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2089261-2089320:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2089403-2089485:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2096557-2096744:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2098095-2098306:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2099712-2099879:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2100462-2100578:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2104082-2104612:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2105883-2106000:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2106888-2110590:1:exon

JADE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: JADE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Jade-1 isoform X3
translation: MQAKVCPHGPSIPDLDIGGLHVPDMRTENLLRVVSETKAVTFTRPRKYIVSSGLEPPELGYVDIRTLADSVCRYDLNDVDVAWLQLANEEFKEMGMPELDEYTMERVMEEFEHRCYENMNHAIETEEGLGIEYDEDVVCDVCQSPDGEDGNEMVFCDKCNICVHQACYGILKVPEGSWLCRTCALGVQPKCLLCPKKGGAMKPTRSGTKWVHVSCALWIPEVSIGSPEKMEPITKVSHIPSSRWALVCSLCNEKVGASIQCSVKNCRTAFHVTCAFDRGLEMKTILAENDEVKFKSYCPKHSSTKKADEETFTESPGRENGTGIQDSSLPAHIDPFHSMGQNQEEAHRVSLRKQKLQQLEDEFYTFVEAAEVAQALRLPEEPVGFLYQYWKLKRKANFNKPLITPKKDEEDNLAKQEQDVLFRRLQLFTHLRQDLERVRNLTYMVTRREKIKRSVCKVQEQIFNMYTKQLEQERVSGVPSSFSLMENTVLFNSPSLGPNTPKIEDLKWHSAFFRKQMGASLTHSLKKPHKRDRVKSSSGNDSKSLLRQPSQKEGTAPPGSFLDFEKPFAETRVVSAQQKNGLVIPDHRKRRDNRPPCEMIKAELKEKTSKHNHKPLRPTELSQRQSENKRALNHSSGRSAPGTRRDLVPKCNGGLVRVNSNQTVVKVPTTPTSPVKNWGGFRIPKKGERQQQGESPEEPCHQNSSYPYLGVGRVSPKDRAKTKLKPDSENDGYSPDAEMSDSETEVADKKCRQQRLSPNSTISRRTDIIRRSIMAS
SIO_010081: JADE1
subclass of: SO_0000673
so part of: JADE1
location: join(2089309..2089320,2089403..2089485,2096557..2096744,2098095..2098306,2099712..2099879,2100462..2100578,2104082..2104612,2105883..2106000,2106888..2107789)
location: region:2089309-2107789:1
so has part: feature:2089309-2089320:1:exon
so has part: feature:2089403-2089485:1:exon
so has part: feature:2096557-2096744:1:exon
so has part: feature:2098095-2098306:1:exon
so has part: feature:2099712-2099879:1:exon
so has part: feature:2100462-2100578:1:exon
so has part: feature:2104082-2104612:1:exon
so has part: feature:2105883-2106000:1:exon
so has part: feature:2106888-2107789:1:exon

XP_030306653.1
type: Protein
SIO_000068: ncbiprotein

position:2089309:1
position: 2089309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2089309-2089320:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2089403-2089485:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2096557-2096744:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2098095-2098306:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2099712-2099879:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2100462-2100578:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2104082-2104612:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2105883-2106000:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2106888-2107789:1:exon

SCLT1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SCLT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2111816..2135680)
location: region:2111816-2135680:-1
so has part: feature:2111816-2135680:-1:exon
subclass of: SO_0000010

103536999
type: Gene
SIO_000068: ncbigene

position:2111816:-1
position: 2111816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2135680:-1
position: 2135680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2111816-2135680:-1:exon

SCLT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SCLT1
product: sodium channel and clathrin linker 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030450802.1
SIO_010081: SCLT1
subclass of: SO_0000673
so part of: SCLT1
location: complement(join(2111816..2112231,2113992..2114087,2115121..2115199,2119620..2119816,2121222..2121414,2122301..2122446,2122869..2122943,2123882..2123953,2125339..2125437,2126215..2126392,2127408..2127499,2127671..2127761,2130502..2130572,2131325..2131390,2131703..2131825,2132427..2132559,2132901..2132956,2133462..2133531,2134404..2134456,2134643..2134710,2135484..2135680))
location: region:2111816-2135680:-1
so has part: feature:2135484-2135680:-1:exon
so has part: feature:2134643-2134710:-1:exon
so has part: feature:2134404-2134456:-1:exon
so has part: feature:2133462-2133531:-1:exon
so has part: feature:2132901-2132956:-1:exon
so has part: feature:2132427-2132559:-1:exon
so has part: feature:2131703-2131825:-1:exon
so has part: feature:2131325-2131390:-1:exon
so has part: feature:2130502-2130572:-1:exon
so has part: feature:2127671-2127761:-1:exon
so has part: feature:2127408-2127499:-1:exon
so has part: feature:2126215-2126392:-1:exon
so has part: feature:2125339-2125437:-1:exon
so has part: feature:2123882-2123953:-1:exon
so has part: feature:2122869-2122943:-1:exon
so has part: feature:2122301-2122446:-1:exon
so has part: feature:2121222-2121414:-1:exon
so has part: feature:2119620-2119816:-1:exon
so has part: feature:2115121-2115199:-1:exon
so has part: feature:2113992-2114087:-1:exon
so has part: feature:2111816-2112231:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2135484-2135680:-1:exon

position:2135484:-1
position: 2135484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2134643-2134710:-1:exon

position:2134643:-1
position: 2134643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2134710:-1
position: 2134710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2134404-2134456:-1:exon

position:2134404:-1
position: 2134404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2134456:-1
position: 2134456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2133462-2133531:-1:exon

position:2133462:-1
position: 2133462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2133531:-1
position: 2133531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2132901-2132956:-1:exon

position:2132901:-1
position: 2132901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2132956:-1
position: 2132956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2132427-2132559:-1:exon

position:2132427:-1
position: 2132427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2132559:-1
position: 2132559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2131703-2131825:-1:exon

position:2131703:-1
position: 2131703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2131825:-1
position: 2131825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2131325-2131390:-1:exon

position:2131325:-1
position: 2131325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2131390:-1
position: 2131390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2130502-2130572:-1:exon

position:2130502:-1
position: 2130502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2130572:-1
position: 2130572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2127671-2127761:-1:exon

position:2127671:-1
position: 2127671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2127761:-1
position: 2127761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2127408-2127499:-1:exon

position:2127408:-1
position: 2127408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2127499:-1
position: 2127499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2126215-2126392:-1:exon

position:2126215:-1
position: 2126215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2126392:-1
position: 2126392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2125339-2125437:-1:exon

position:2125339:-1
position: 2125339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2125437:-1
position: 2125437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2123882-2123953:-1:exon

position:2123882:-1
position: 2123882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2123953:-1
position: 2123953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2122869-2122943:-1:exon

position:2122869:-1
position: 2122869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2122943:-1
position: 2122943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2122301-2122446:-1:exon

position:2122301:-1
position: 2122301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2122446:-1
position: 2122446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2121222-2121414:-1:exon

position:2121222:-1
position: 2121222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2121414:-1
position: 2121414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2119620-2119816:-1:exon

position:2119620:-1
position: 2119620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2119816:-1
position: 2119816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2115121-2115199:-1:exon

position:2115121:-1
position: 2115121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2115199:-1
position: 2115199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2113992-2114087:-1:exon

position:2113992:-1
position: 2113992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2114087:-1
position: 2114087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2111816-2112231:-1:exon

position:2112231:-1
position: 2112231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SCLT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SCLT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium channel and clathrin linker 1
translation: MATGFGSEGEPDQRLNMAFGQYETDEILRTTSEQKNAAGGDGISGSRITEQRLSTLITEHDKHLEKMREQLQLYKVQMCEMRKKFEEVTNENERLHAELREAVEKQLEALPFLPLGTDMIGDEEIVRNLQEQLQLTSQEKEQAVELWQTVLQEHDRLQQQYQERMAETQIHVAERQKQKKQLTGFQQLTEQLHVANVKIEMSNQQFLKTITEQNVALEQLRKQLRKAKTDGRTANAKVDEMTKLVEKLQGQLERKEEEAASAQQRETASDKRLQQLQSCIKQLETRLRVTVQHAEELQTERTALEKQIGDLHTKCANLRREKYNAVAKVEDCIQLLEEANLQKSQALFGEKQKEEDIEKMKDEMSQLTEDVAARIRKAVDSTKKQYNVQISRLTAELSALQMECGEKQSQIERAIREKRAVEEELEKIYKEDRGHESENRKLDQLHEKYLLAETRKCDLQLSLQTTENKLKQLKINSEKEKSRCQEVISKLQSTLDSERENSAFVSEQRLKLQQENEQLQKEMEGLRKLAIEAQQKAKLKISTMEHEHALKEDVYEARLKEMEDTSQKSTAELRRLLVAQQKATSRWKKEKKNLTETTEATISKLKSELSQQKLRSQELIAQLEMANEKVIEDEKLMTEYQEYIDRLQKRLSLAEERAATASQKLSLITTQKKKAASLKDVENI
SIO_010081: SCLT1
subclass of: SO_0000673
so part of: SCLT1
location: complement(join(2112169..2112231,2113992..2114087,2115121..2115199,2119620..2119816,2121222..2121414,2122301..2122446,2122869..2122943,2123882..2123953,2125339..2125437,2126215..2126392,2127408..2127499,2127671..2127761,2130502..2130572,2131325..2131390,2131703..2131825,2132427..2132559,2132901..2132956,2133462..2133531,2134404..2134456,2134643..2134710,2135484..2135517))
location: region:2112169-2135517:-1
so has part: feature:2135484-2135517:-1:exon
so has part: feature:2134643-2134710:-1:exon
so has part: feature:2134404-2134456:-1:exon
so has part: feature:2133462-2133531:-1:exon
so has part: feature:2132901-2132956:-1:exon
so has part: feature:2132427-2132559:-1:exon
so has part: feature:2131703-2131825:-1:exon
so has part: feature:2131325-2131390:-1:exon
so has part: feature:2130502-2130572:-1:exon
so has part: feature:2127671-2127761:-1:exon
so has part: feature:2127408-2127499:-1:exon
so has part: feature:2126215-2126392:-1:exon
so has part: feature:2125339-2125437:-1:exon
so has part: feature:2123882-2123953:-1:exon
so has part: feature:2122869-2122943:-1:exon
so has part: feature:2122301-2122446:-1:exon
so has part: feature:2121222-2121414:-1:exon
so has part: feature:2119620-2119816:-1:exon
so has part: feature:2115121-2115199:-1:exon
so has part: feature:2113992-2114087:-1:exon
so has part: feature:2112169-2112231:-1:exon

XP_030306662.1
type: Protein
SIO_000068: ncbiprotein

position:2112169:-1
position: 2112169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2135517:-1
position: 2135517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2135484-2135517:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2134643-2134710:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2134404-2134456:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2133462-2133531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2132901-2132956:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2132427-2132559:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2131703-2131825:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2131325-2131390:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2130502-2130572:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2127671-2127761:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2127408-2127499:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2126215-2126392:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2125339-2125437:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2123882-2123953:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2122869-2122943:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2122301-2122446:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2121222-2121414:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2119620-2119816:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2115121-2115199:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2113992-2114087:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2112169-2112231:-1:exon

C4BH4orf33
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: C4BH4orf33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2135168..2141884
location: region:2135168-2141884:1
so has part: feature:2135168-2141884:1:exon
subclass of: SO_0000010

103536998
type: Gene
SIO_000068: ncbigene

position:2135168:1
position: 2135168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2141884:1
position: 2141884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2135168-2141884:1:exon

C4BH4orf33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: C4BH4orf33
product: chromosome 4B C4orf33 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030450796.1
SIO_010081: C4BH4orf33
subclass of: SO_0000673
so part of: C4BH4orf33
location: join(2135168..2135723,2136171..2136265,2138082..2138271,2139062..2139122,2139294..2139345,2139436..2139626,2141043..2141884)
location: region:2135168-2141884:1
so has part: feature:2135168-2135723:1:exon
so has part: feature:2136171-2136265:1:exon
so has part: feature:2138082-2138271:1:exon
so has part: feature:2139062-2139122:1:exon
so has part: feature:2139294-2139345:1:exon
so has part: feature:2139436-2139626:1:exon
so has part: feature:2141043-2141884:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2135168-2135723:1:exon

position:2135723:1
position: 2135723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2136171-2136265:1:exon

position:2136171:1
position: 2136171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2136265:1
position: 2136265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2138082-2138271:1:exon

position:2138082:1
position: 2138082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2138271:1
position: 2138271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2139062-2139122:1:exon

position:2139062:1
position: 2139062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2139122:1
position: 2139122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2139294-2139345:1:exon

position:2139294:1
position: 2139294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2139345:1
position: 2139345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2139436-2139626:1:exon

position:2139436:1
position: 2139436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2139626:1
position: 2139626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2141043-2141884:1:exon

position:2141043:1
position: 2141043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C4BH4orf33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: C4BH4orf33
product: chromosome 4B C4orf33 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030450797.1
SIO_010081: C4BH4orf33
subclass of: SO_0000673
so part of: C4BH4orf33
location: join(2135168..2135321,2135403..2135723,2136171..2136265,2138082..2138271,2139062..2139122,2139294..2139345,2139436..2139626,2141043..2141884)
location: region:2135168-2141884:1
so has part: feature:2135168-2135321:1:exon
so has part: feature:2135403-2135723:1:exon
so has part: feature:2136171-2136265:1:exon
so has part: feature:2138082-2138271:1:exon
so has part: feature:2139062-2139122:1:exon
so has part: feature:2139294-2139345:1:exon
so has part: feature:2139436-2139626:1:exon
so has part: feature:2141043-2141884:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2135168-2135321:1:exon

position:2135321:1
position: 2135321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2135403-2135723:1:exon

position:2135403:1
position: 2135403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2136171-2136265:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2138082-2138271:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2139062-2139122:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2139294-2139345:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2139436-2139626:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2141043-2141884:1:exon

C4BH4orf33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: C4BH4orf33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0462 protein C4orf33 homolog isoform X1
translation: MVLTIKCLPREHSGFSLPVVLVGFSSACPCSSFPCRRRTQFTATPRLVTFPGKTSLGAVRLSRTVPETLALGTPILSPGQGVPGPTRDAPGAVRQPRKEPLAETSPGSPSLPNPVAIFPLESFTPPQFPSLESLLRRNEKPVISAARHPRRFTSLAESAAESAGTGRNCRGPGTGCPHTSVHVSFGNAAALCDWSGGGVSQTGNGFEPSRSLFLHRLCMKMEFAIKHTWDGLPVSHEPVRIVLKPDNSGLIMEVSAPFFNDPPAPLGEPGKPFNRLWDYEVVEAFFLRDRTEQYLEVELCPHGQHLLLLLSSKRKVWKDELPLDFEVTRMNTKWEGKAHLPWNYFPPSTNKFNAFAIHGSGEERKYEALHPVPPQEGQQPDFHRLEYFKYLNLKGLMGEDWKQPESDLWKSLTQ
SIO_010081: C4BH4orf33
subclass of: SO_0000673
so part of: C4BH4orf33
location: join(2135168..2135723,2136171..2136265,2138082..2138271,2139062..2139122,2139294..2139345,2139436..2139626,2141043..2141142)
location: region:2135168-2141142:1
so has part: feature:2135168-2135723:1:exon
so has part: feature:2136171-2136265:1:exon
so has part: feature:2138082-2138271:1:exon
so has part: feature:2139062-2139122:1:exon
so has part: feature:2139294-2139345:1:exon
so has part: feature:2139436-2139626:1:exon
so has part: feature:2141043-2141142:1:exon

XP_030306656.1
type: Protein
SIO_000068: ncbiprotein

position:2141142:1
position: 2141142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2135168-2135723:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2136171-2136265:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2138082-2138271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2139062-2139122:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2139294-2139345:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2139436-2139626:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2141043-2141142:1:exon

C4BH4orf33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: C4BH4orf33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0462 protein C4orf33 homolog isoform X2
translation: MVLTIKCLPREHSGFSLPVVLVGFSSACPCSSFPCRRRTQFTATPRLVTFPGQGVPGPTRDAPGAVRQPRKEPLAETSPGSPSLPNPVAIFPLESFTPPQFPSLESLLRRNEKPVISAARHPRRFTSLAESAAESAGTGRNCRGPGTGCPHTSVHVSFGNAAALCDWSGGGVSQTGNGFEPSRSLFLHRLCMKMEFAIKHTWDGLPVSHEPVRIVLKPDNSGLIMEVSAPFFNDPPAPLGEPGKPFNRLWDYEVVEAFFLRDRTEQYLEVELCPHGQHLLLLLSSKRKVWKDELPLDFEVTRMNTKWEGKAHLPWNYFPPSTNKFNAFAIHGSGEERKYEALHPVPPQEGQQPDFHRLEYFKYLNLKGLMGEDWKQPESDLWKSLTQ
SIO_010081: C4BH4orf33
subclass of: SO_0000673
so part of: C4BH4orf33
location: join(2135168..2135321,2135403..2135723,2136171..2136265,2138082..2138271,2139062..2139122,2139294..2139345,2139436..2139626,2141043..2141142)
location: region:2135168-2141142:1
so has part: feature:2135168-2135321:1:exon
so has part: feature:2135403-2135723:1:exon
so has part: feature:2136171-2136265:1:exon
so has part: feature:2138082-2138271:1:exon
so has part: feature:2139062-2139122:1:exon
so has part: feature:2139294-2139345:1:exon
so has part: feature:2139436-2139626:1:exon
so has part: feature:2141043-2141142:1:exon

XP_030306657.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2135168-2135321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2135403-2135723:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2136171-2136265:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2138082-2138271:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2139062-2139122:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2139294-2139345:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2139436-2139626:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2141043-2141142:1:exon

C4BH4orf33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: C4BH4orf33
product: chromosome 4B C4orf33 homolog, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030450801.1
SIO_010081: C4BH4orf33
subclass of: SO_0000673
so part of: C4BH4orf33
location: join(2135257..2135321,2138082..2138271,2139062..2139122,2139294..2139345,2139436..2139626,2141043..2141884)
location: region:2135257-2141884:1
so has part: feature:2135257-2135321:1:exon
so has part: feature:2138082-2138271:1:exon
so has part: feature:2139062-2139122:1:exon
so has part: feature:2139294-2139345:1:exon
so has part: feature:2139436-2139626:1:exon
so has part: feature:2141043-2141884:1:exon

position:2135257:1
position: 2135257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2135257-2135321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2138082-2138271:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2139062-2139122:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2139294-2139345:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2139436-2139626:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2141043-2141884:1:exon

C4BH4orf33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: C4BH4orf33
product: chromosome 4B C4orf33 homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030450798.1
SIO_010081: C4BH4orf33
subclass of: SO_0000673
so part of: C4BH4orf33
location: join(2135482..2135723,2138082..2138271,2139062..2139122,2139294..2139345,2139436..2139626,2141043..2141884)
location: region:2135482-2141884:1
so has part: feature:2135482-2135723:1:exon
so has part: feature:2138082-2138271:1:exon
so has part: feature:2139062-2139122:1:exon
so has part: feature:2139294-2139345:1:exon
so has part: feature:2139436-2139626:1:exon
so has part: feature:2141043-2141884:1:exon

position:2135482:1
position: 2135482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2135482-2135723:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2138082-2138271:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2139062-2139122:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2139294-2139345:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2139436-2139626:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2141043-2141884:1:exon

C4BH4orf33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: C4BH4orf33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0462 protein C4orf33 homolog isoform X3
translation: MKSRSSQPLDTPGVSLRWQRAQRRARARAETAGDRGPAALTHRFTFLSCMKMEFAIKHTWDGLPVSHEPVRIVLKPDNSGLIMEVSAPFFNDPPAPLGEPGKPFNRLWDYEVVEAFFLRDRTEQYLEVELCPHGQHLLLLLSSKRKVWKDELPLDFEVTRMNTKWEGKAHLPWNYFPPSTNKFNAFAIHGSGEERKYEALHPVPPQEGQQPDFHRLEYFKYLNLKGLMGEDWKQPESDLWKSLTQ
SIO_010081: C4BH4orf33
subclass of: SO_0000673
so part of: C4BH4orf33
location: join(2135580..2135723,2138082..2138271,2139062..2139122,2139294..2139345,2139436..2139626,2141043..2141142)
location: region:2135580-2141142:1
so has part: feature:2135580-2135723:1:exon
so has part: feature:2138082-2138271:1:exon
so has part: feature:2139062-2139122:1:exon
so has part: feature:2139294-2139345:1:exon
so has part: feature:2139436-2139626:1:exon
so has part: feature:2141043-2141142:1:exon

XP_030306658.1
type: Protein
SIO_000068: ncbiprotein

position:2135580:1
position: 2135580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2135580-2135723:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2138082-2138271:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2139062-2139122:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2139294-2139345:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2139436-2139626:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2141043-2141142:1:exon

C4BH4orf33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: C4BH4orf33
product: chromosome 4B C4orf33 homolog, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030450800.1
SIO_010081: C4BH4orf33
subclass of: SO_0000673
so part of: C4BH4orf33
location: join(2135796..2136265,2137130..2137254,2138022..2138271,2139062..2139122,2139294..2139345,2139436..2139626,2141043..2141884)
location: region:2135796-2141884:1
so has part: feature:2135796-2136265:1:exon
so has part: feature:2137130-2137254:1:exon
so has part: feature:2138022-2138271:1:exon
so has part: feature:2139062-2139122:1:exon
so has part: feature:2139294-2139345:1:exon
so has part: feature:2139436-2139626:1:exon
so has part: feature:2141043-2141884:1:exon

position:2135796:1
position: 2135796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2135796-2136265:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2137130-2137254:1:exon

position:2137130:1
position: 2137130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2137254:1
position: 2137254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2138022-2138271:1:exon

position:2138022:1
position: 2138022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2139062-2139122:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2139294-2139345:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2139436-2139626:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2141043-2141884:1:exon

C4BH4orf33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: C4BH4orf33
product: chromosome 4B C4orf33 homolog, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030450799.1
SIO_010081: C4BH4orf33
subclass of: SO_0000673
so part of: C4BH4orf33
location: join(2135796..2136265,2137130..2137254,2138082..2138271,2139062..2139122,2139294..2139345,2139436..2139626,2141043..2141884)
location: region:2135796-2141884:1
so has part: feature:2135796-2136265:1:exon
so has part: feature:2137130-2137254:1:exon
so has part: feature:2138082-2138271:1:exon
so has part: feature:2139062-2139122:1:exon
so has part: feature:2139294-2139345:1:exon
so has part: feature:2139436-2139626:1:exon
so has part: feature:2141043-2141884:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2135796-2136265:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2137130-2137254:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2138082-2138271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2139062-2139122:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2139294-2139345:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2139436-2139626:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2141043-2141884:1:exon

C4BH4orf33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: C4BH4orf33
product: chromosome 4B C4orf33 homolog, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_008503247.2
SIO_010081: C4BH4orf33
subclass of: SO_0000673
so part of: C4BH4orf33
location: join(2135796..2136105,2138082..2138271,2139062..2139122,2139294..2139345,2139436..2139626,2141043..2141884)
location: region:2135796-2141884:1
so has part: feature:2135796-2136105:1:exon
so has part: feature:2138082-2138271:1:exon
so has part: feature:2139062-2139122:1:exon
so has part: feature:2139294-2139345:1:exon
so has part: feature:2139436-2139626:1:exon
so has part: feature:2141043-2141884:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2135796-2136105:1:exon

position:2136105:1
position: 2136105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2138082-2138271:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2139062-2139122:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2139294-2139345:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2139436-2139626:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2141043-2141884:1:exon

C4BH4orf33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: C4BH4orf33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0462 protein C4orf33 homolog isoform X4
translation: MKMEFAIKHTWDGLPVSHEPVRIVLKPDNSGLIMEVSAPFFNDPPAPLGEPGKPFNRLWDYEVVEAFFLRDRTEQYLEVELCPHGQHLLLLLSSKRKVWKDELPLDFEVTRMNTKWEGKAHLPWNYFPPSTNKFNAFAIHGSGEERKYEALHPVPPQEGQQPDFHRLEYFKYLNLKGLMGEDWKQPESDLWKSLTQ
SIO_010081: C4BH4orf33
subclass of: SO_0000673
so part of: C4BH4orf33
location: join(2138085..2138271,2139062..2139122,2139294..2139345,2139436..2139626,2141043..2141142)
location: region:2138085-2141142:1
so has part: feature:2138085-2138271:1:exon
so has part: feature:2139062-2139122:1:exon
so has part: feature:2139294-2139345:1:exon
so has part: feature:2139436-2139626:1:exon
so has part: feature:2141043-2141142:1:exon

XP_030306659.1
type: Protein
SIO_000068: ncbiprotein

position:2138085:1
position: 2138085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2138085-2138271:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2139062-2139122:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2139294-2139345:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2139436-2139626:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2141043-2141142:1:exon

C4BH4orf33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: C4BH4orf33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0462 protein C4orf33 homolog isoform X4
translation: MKMEFAIKHTWDGLPVSHEPVRIVLKPDNSGLIMEVSAPFFNDPPAPLGEPGKPFNRLWDYEVVEAFFLRDRTEQYLEVELCPHGQHLLLLLSSKRKVWKDELPLDFEVTRMNTKWEGKAHLPWNYFPPSTNKFNAFAIHGSGEERKYEALHPVPPQEGQQPDFHRLEYFKYLNLKGLMGEDWKQPESDLWKSLTQ
SIO_010081: C4BH4orf33
subclass of: SO_0000673
so part of: C4BH4orf33
location: join(2138085..2138271,2139062..2139122,2139294..2139345,2139436..2139626,2141043..2141142)
location: region:2138085-2141142:1
so has part: feature:2138085-2138271:1:exon
so has part: feature:2139062-2139122:1:exon
so has part: feature:2139294-2139345:1:exon
so has part: feature:2139436-2139626:1:exon
so has part: feature:2141043-2141142:1:exon

XP_030306660.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2138085-2138271:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2139062-2139122:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2139294-2139345:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2139436-2139626:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2141043-2141142:1:exon

C4BH4orf33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: C4BH4orf33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0462 protein C4orf33 homolog isoform X4
translation: MKMEFAIKHTWDGLPVSHEPVRIVLKPDNSGLIMEVSAPFFNDPPAPLGEPGKPFNRLWDYEVVEAFFLRDRTEQYLEVELCPHGQHLLLLLSSKRKVWKDELPLDFEVTRMNTKWEGKAHLPWNYFPPSTNKFNAFAIHGSGEERKYEALHPVPPQEGQQPDFHRLEYFKYLNLKGLMGEDWKQPESDLWKSLTQ
SIO_010081: C4BH4orf33
subclass of: SO_0000673
so part of: C4BH4orf33
location: join(2138085..2138271,2139062..2139122,2139294..2139345,2139436..2139626,2141043..2141142)
location: region:2138085-2141142:1
so has part: feature:2138085-2138271:1:exon
so has part: feature:2139062-2139122:1:exon
so has part: feature:2139294-2139345:1:exon
so has part: feature:2139436-2139626:1:exon
so has part: feature:2141043-2141142:1:exon

XP_030306661.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2138085-2138271:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2139062-2139122:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2139294-2139345:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2139436-2139626:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2141043-2141142:1:exon

C4BH4orf33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: C4BH4orf33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0462 protein C4orf33 homolog isoform X4
translation: MKMEFAIKHTWDGLPVSHEPVRIVLKPDNSGLIMEVSAPFFNDPPAPLGEPGKPFNRLWDYEVVEAFFLRDRTEQYLEVELCPHGQHLLLLLSSKRKVWKDELPLDFEVTRMNTKWEGKAHLPWNYFPPSTNKFNAFAIHGSGEERKYEALHPVPPQEGQQPDFHRLEYFKYLNLKGLMGEDWKQPESDLWKSLTQ
SIO_010081: C4BH4orf33
subclass of: SO_0000673
so part of: C4BH4orf33
location: join(2138085..2138271,2139062..2139122,2139294..2139345,2139436..2139626,2141043..2141142)
location: region:2138085-2141142:1
so has part: feature:2138085-2138271:1:exon
so has part: feature:2139062-2139122:1:exon
so has part: feature:2139294-2139345:1:exon
so has part: feature:2139436-2139626:1:exon
so has part: feature:2141043-2141142:1:exon

XP_008501469.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2138085-2138271:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2139062-2139122:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2139294-2139345:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2139436-2139626:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2141043-2141142:1:exon

PCDH10
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PCDH10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3075160..3107034
location: region:3075160-3107034:1
so has part: feature:3075160-3107034:1:exon
subclass of: SO_0000010

103537010
type: Gene
SIO_000068: ncbigene

position:3075160:1
position: 3075160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3107034:1
position: 3107034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3075160-3107034:1:exon

PCDH10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PCDH10
product: protocadherin 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 30 Proteins, and 2% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030450649.1
SIO_010081: PCDH10
subclass of: SO_0000673
so part of: PCDH10
location: join(3075160..3078023,3079573..3079631,3080206..3080312,3088566..3088871,3105854..3107034)
location: region:3075160-3107034:1
so has part: feature:3075160-3078023:1:exon
so has part: feature:3079573-3079631:1:exon
so has part: feature:3080206-3080312:1:exon
so has part: feature:3088566-3088871:1:exon
so has part: feature:3105854-3107034:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3075160-3078023:1:exon

position:3078023:1
position: 3078023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3079573-3079631:1:exon

position:3079573:1
position: 3079573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3079631:1
position: 3079631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3080206-3080312:1:exon

position:3080206:1
position: 3080206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3080312:1
position: 3080312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3088566-3088871:1:exon

position:3088566:1
position: 3088566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3088871:1
position: 3088871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3105854-3107034:1:exon

position:3105854:1
position: 3105854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCDH10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PCDH10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-10
translation: MIVLFLFALLWMVEGALCQLHYTVQEEQEHGTFVGNIAEDLGLDITKLSARRFQTAPNSRSPYLELNLETGVLYVNEKIDREQICKQSPSCLLHLEVFLENPLELFRVEIEVLDINDNPPSFPEPDLTVEISESATPGTRFPLESAFDPDVGTNSLRTYEITPNSYFSLDVQTQGDGNRFAELVLDKPLDREQQAVHRYVLTAVDGGQPQQRTGTALLTIRVLDSNDNVPAFEQPVYTVSLPENSPPGTLVLQLNATDPDEGQNGEVIYSFSSHISARARELFGIAPRTGRLEVSGELDYEESSVYQVYVQAKDLGPNAVPAHCKVLVRVLDANDNAPEISFSTVKEAVSEAAAPGTVVALFSVSDRDSEENGQVQCELLQGDAPFRLKSSFKNYYTIVTEGPLDREQPGGDAYTLTVVARDRGQPPLSTSKSIQVRVSDVNDNAPRFSQPVYQVYVSENNVPGAYIYAVSATDRDQGANAQLAYSILESQIQGMSVFTYVSINSENGFLYALRSFDYEQLKEFSFQVEARDAGEEPQPLAGNATVNIVVVDQNDNAPAIVSPLPGRNGTPAREALPRGAEPGYLVSRVAAVDADDGENARLTYSIVRGNEASLFRMDWRTGELRTARRVPAKRDPQRPYELVIEVRDHGQPPLSSTAAIQVVLVDGAAERPGGGGGLGAGAGAGGGGGSGEHRPSRSGGDTSLDLTLILIIALGSVSFIFLLAMIVLAVRCQKEKKLNIYTCLASDCCLGCCCCCPCCSRQARARKKKLSKSDIMLVQSSNVPSNPAQVPVEESGSFGSHHHNQNYCYQVCLTPESAKTDLMFLKPCSPSRSTDAEHNSCGAIVTGYADQQPDIISNGSILSSETKHQRTELSYLVDRPRRVNSSAFQEADIVSSKDSGHGDSEQGDSDHDATNRGQSSGMDLFSNCTEECKALGHSDRCWMPSFVPSDGRQAADYRSNLHVPGMDSVPDTEVFETPEAQPGAERSFSTFGKEKALHNTLERKELDGLLSNTRAPYKPPYLTRKRIC
SIO_010081: PCDH10
subclass of: SO_0000673
so part of: PCDH10
location: join(3075429..3078023,3079573..3079631,3080206..3080312,3088566..3088871,3105854..3105873)
location: region:3075429-3105873:1
so has part: feature:3075429-3078023:1:exon
so has part: feature:3079573-3079631:1:exon
so has part: feature:3080206-3080312:1:exon
so has part: feature:3088566-3088871:1:exon
so has part: feature:3105854-3105873:1:exon

XP_030306509.1
type: Protein
SIO_000068: ncbiprotein

position:3075429:1
position: 3075429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3105873:1
position: 3105873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3075429-3078023:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3079573-3079631:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3080206-3080312:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3088566-3088871:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3105854-3105873:1:exon

PCDH18
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: PCDH18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4432912..4442130)
location: region:4432912-4442130:-1
so has part: feature:4432912-4442130:-1:exon
subclass of: SO_0000010

103525346
type: Gene
SIO_000068: ncbigene

position:4432912:-1
position: 4432912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4442130:-1
position: 4442130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4432912-4442130:-1:exon

PCDH18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PCDH18
product: protocadherin 18, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_008490299.2
SIO_010081: PCDH18
subclass of: SO_0000673
so part of: PCDH18
location: complement(join(4432912..4434178,4438006..4438169,4438297..4438385,4439296..4441800))
location: region:4432912-4441800:-1
so has part: feature:4439296-4441800:-1:exon
so has part: feature:4438297-4438385:-1:exon
so has part: feature:4438006-4438169:-1:exon
so has part: feature:4432912-4434178:-1:exon

position:4441800:-1
position: 4441800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4439296-4441800:-1:exon

position:4439296:-1
position: 4439296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4438297-4438385:-1:exon

position:4438297:-1
position: 4438297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4438385:-1
position: 4438385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4438006-4438169:-1:exon

position:4438006:-1
position: 4438006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4438169:-1
position: 4438169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4432912-4434178:-1:exon

position:4434178:-1
position: 4434178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCDH18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: PCDH18
product: protocadherin 18, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 25 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_008490300.2
SIO_010081: PCDH18
subclass of: SO_0000673
so part of: PCDH18
location: complement(join(4433502..4434178,4438006..4438169,4438297..4438382,4439296..4442130))
location: region:4433502-4442130:-1
so has part: feature:4439296-4442130:-1:exon
so has part: feature:4438297-4438382:-1:exon
so has part: feature:4438006-4438169:-1:exon
so has part: feature:4433502-4434178:-1:exon

position:4433502:-1
position: 4433502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4439296-4442130:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4438297-4438382:-1:exon

position:4438382:-1
position: 4438382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4438006-4438169:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4433502-4434178:-1:exon

PCDH18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PCDH18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-18 isoform X2
translation: MNCENLQMHRIGSKMHFIFIFALVIGSFSKAVLGKNLKYRIYEEQRVGSVIARLSEDVADVLLKMPNPASVRFRAMQRGNSPLLVVREDNGEISIGAKIDREQLCQKNLNCSIEFDVITLPTEHLQLFHVEVEVLDINDNSPQFSRALIPIEISESAAVGTRIPLDSAFDPDVGDNSLHTYSLSANDFFSIEVRTRTDGAKYAELIVVKELDRELKSSYELQLTASDKGVPQRSGSSLLKISISDSNDNSPVFEQQSYIIQLPENSPVGTLLIDLNATDPDEGANGKVVYSFSSHVSAKILETFKIDSEKGHLTLLKQVDYEVTKSYELDAQAQDLGPNSIPAHCKIIIKIVDVNDNRPEINLNLMSPEKDEVAYISEGSPLDTFVALVRVQDKDSGVNGEIVCKLHGHGHFKLQKTYENNYLILTNATLDREKRSEYSLTVIAEDKGTPSLSTVKHFTVQISDENDNPPRFQTNRYEVVILENNSPGAYITSVTATDPDLGDNGQVTYTILESYILGSSITTYVTIDPSNGAIYALRTFDHEEVNQIAFMVQARDGGSQQLVSNTTVVLTIIDENDNAPVIVGPALRNSTAEVSIPKDAGIGFLVTRIRATDRDSGMNSELSCSIASDKENSIFVMDPKTCDISINVSVESVPTKQWEFFVIVQDKGSPQLSTKALLKCTVFEYVYSFASTEATLVSQPSLDVSMITIISLGSICAVLLVIMVIFATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTVNGTLPIRSHHRASPSSSPTLERGQMSSRQSHHSHQSLNSLVTISSNHVPENFSLELTHATPAVEVSQLLSMLHQGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRESPIDRLLGEGFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPSPQQQLQQQQQGLEEDPQAADAGEKKKKKKSFSTFGKDCQSEEESGDTCTSSLLSEMSSVFQRLLPPSLDAYTECNELERASSLERRKGHLPAKTGNYPQGVAAWAASTHFQNPANNGPALGTHSSSQPSSKWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDVRQN
SIO_010081: PCDH18
subclass of: SO_0000673
so part of: PCDH18
location: complement(join(4433502..4434178,4438006..4438169,4438297..4438382,4439296..4441800))
location: region:4433502-4441800:-1
so has part: feature:4439296-4441800:-1:exon
so has part: feature:4438297-4438382:-1:exon
so has part: feature:4438006-4438169:-1:exon
so has part: feature:4433502-4434178:-1:exon

XP_008488522.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4439296-4441800:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4438297-4438382:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4438006-4438169:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4433502-4434178:-1:exon

PCDH18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: PCDH18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-18 isoform X1
translation: MNCENLQMHRIGSKMHFIFIFALVIGSFSKAVLGKNLKYRIYEEQRVGSVIARLSEDVADVLLKMPNPASVRFRAMQRGNSPLLVVREDNGEISIGAKIDREQLCQKNLNCSIEFDVITLPTEHLQLFHVEVEVLDINDNSPQFSRALIPIEISESAAVGTRIPLDSAFDPDVGDNSLHTYSLSANDFFSIEVRTRTDGAKYAELIVVKELDRELKSSYELQLTASDKGVPQRSGSSLLKISISDSNDNSPVFEQQSYIIQLPENSPVGTLLIDLNATDPDEGANGKVVYSFSSHVSAKILETFKIDSEKGHLTLLKQVDYEVTKSYELDAQAQDLGPNSIPAHCKIIIKIVDVNDNRPEINLNLMSPEKDEVAYISEGSPLDTFVALVRVQDKDSGVNGEIVCKLHGHGHFKLQKTYENNYLILTNATLDREKRSEYSLTVIAEDKGTPSLSTVKHFTVQISDENDNPPRFQTNRYEVVILENNSPGAYITSVTATDPDLGDNGQVTYTILESYILGSSITTYVTIDPSNGAIYALRTFDHEEVNQIAFMVQARDGGSQQLVSNTTVVLTIIDENDNAPVIVGPALRNSTAEVSIPKDAGIGFLVTRIRATDRDSGMNSELSCSIASDKENSIFVMDPKTCDISINVSVESVPTKQWEFFVIVQDKGSPQLSTKALLKCTVFEYVYSFASTEATLVSQPSLDVSMITIISLGSICAVLLVIMVIFATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTVNGTLPIRSHHRASPSSSPTLERGQMSSRQSHHSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLHQGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRESPIDRLLGEGFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPSPQQQLQQQQQGLEEDPQAADAGEKKKKKKSFSTFGKDCQSEEESGDTCTSSLLSEMSSVFQRLLPPSLDAYTECNELERASSLERRKGHLPAKTGNYPQGVAAWAASTHFQNPANNGPALGTHSSSQPSSKWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDVRQN
SIO_010081: PCDH18
subclass of: SO_0000673
so part of: PCDH18
location: complement(join(4433502..4434178,4438006..4438169,4438297..4438385,4439296..4441800))
location: region:4433502-4441800:-1
so has part: feature:4439296-4441800:-1:exon
so has part: feature:4438297-4438385:-1:exon
so has part: feature:4438006-4438169:-1:exon
so has part: feature:4433502-4434178:-1:exon

XP_008488521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4439296-4441800:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4438297-4438385:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4438006-4438169:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4433502-4434178:-1:exon

SLC7A11
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SLC7A11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4673941..4731731)
location: region:4673941-4731731:-1
so has part: feature:4673941-4731731:-1:exon
subclass of: SO_0000010

103525345
type: Gene
SIO_000068: ncbigene

position:4673941:-1
position: 4673941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4731731:-1
position: 4731731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4673941-4731731:-1:exon

SLC7A11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SLC7A11
product: solute carrier family 7 member 11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 44 Proteins, and 44% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_008490297.2
SIO_010081: SLC7A11
subclass of: SO_0000673
so part of: SLC7A11
location: complement(join(4673941..4674033,4678665..4678842,4680503..4680652,4683269..4683365,4683858..4683961,4685215..4685338,4709779..4709823,4713351..4713450,4715663..4715788,4723423..4723538,4727751..4727877,4730660..4731731))
location: region:4673941-4731731:-1
so has part: feature:4730660-4731731:-1:exon
so has part: feature:4727751-4727877:-1:exon
so has part: feature:4723423-4723538:-1:exon
so has part: feature:4715663-4715788:-1:exon
so has part: feature:4713351-4713450:-1:exon
so has part: feature:4709779-4709823:-1:exon
so has part: feature:4685215-4685338:-1:exon
so has part: feature:4683858-4683961:-1:exon
so has part: feature:4683269-4683365:-1:exon
so has part: feature:4680503-4680652:-1:exon
so has part: feature:4678665-4678842:-1:exon
so has part: feature:4673941-4674033:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4730660-4731731:-1:exon

position:4730660:-1
position: 4730660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4727751-4727877:-1:exon

position:4727751:-1
position: 4727751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4727877:-1
position: 4727877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4723423-4723538:-1:exon

position:4723423:-1
position: 4723423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4723538:-1
position: 4723538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4715663-4715788:-1:exon

position:4715663:-1
position: 4715663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4715788:-1
position: 4715788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4713351-4713450:-1:exon

position:4713351:-1
position: 4713351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4713450:-1
position: 4713450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4709779-4709823:-1:exon

position:4709779:-1
position: 4709779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4709823:-1
position: 4709823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4685215-4685338:-1:exon

position:4685215:-1
position: 4685215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4685338:-1
position: 4685338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4683858-4683961:-1:exon

position:4683858:-1
position: 4683858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4683961:-1
position: 4683961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4683269-4683365:-1:exon

position:4683269:-1
position: 4683269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4683365:-1
position: 4683365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4680503-4680652:-1:exon

position:4680503:-1
position: 4680503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4680652:-1
position: 4680652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4678665-4678842:-1:exon

position:4678665:-1
position: 4678665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4678842:-1
position: 4678842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4673941-4674033:-1:exon

position:4674033:-1
position: 4674033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC7A11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SLC7A11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cystine/glutamate transporter
translation: MVRKAAVSTLSNGSYLQGQTNGRLPSLDSGQPAQKEKVVLKKKVTLLRGISIIIGTIIGAGIFISPKGILKNTGSVGMSLTVWTVCGILSLFGALCYAELGTCIKKSGGHYTYILEAFGPLPAFVRVWVELLIIRPAATAVISLAFGRYILEPFFMQCEIPELAIKLITAVGITLVMVLNSMSVSWSARIQIFLTFCKLVAILIIIVPGVIQLIKGETQHFQNAFAGNDASVMGLPLAFYSGMYAYSGWFYLNFVTEEVENPEKTIPLAICISMIIVTVGYVLTNVAYFTTISAGELLLSKAVAVTFAERLMGSFSLAVPVFVALSCFGSMNGGIFAVSRMFFVASREGHLPEILSMIHVRKHTPLPAVIVLHPLTMIMLFNGDLYSLLNFLSFARWLFIGLVVAGLIYLRYKRPDMPRPFKVPLFIPALFSFTCLFMVALSLYSDPVNTGIGFAITLTGVPAYYLFIVWDKKPKWFRRLLDKVTLTLQILLEVIPSEEDQKS
SIO_010081: SLC7A11
subclass of: SO_0000673
so part of: SLC7A11
location: complement(join(4673966..4674033,4678665..4678842,4680503..4680652,4683269..4683365,4683858..4683961,4685215..4685338,4709779..4709823,4713351..4713450,4715663..4715788,4723423..4723538,4727751..4727877,4730660..4730936))
location: region:4673966-4730936:-1
so has part: feature:4730660-4730936:-1:exon
so has part: feature:4727751-4727877:-1:exon
so has part: feature:4723423-4723538:-1:exon
so has part: feature:4715663-4715788:-1:exon
so has part: feature:4713351-4713450:-1:exon
so has part: feature:4709779-4709823:-1:exon
so has part: feature:4685215-4685338:-1:exon
so has part: feature:4683858-4683961:-1:exon
so has part: feature:4683269-4683365:-1:exon
so has part: feature:4680503-4680652:-1:exon
so has part: feature:4678665-4678842:-1:exon
so has part: feature:4673966-4674033:-1:exon

XP_008488519.1
type: Protein
SIO_000068: ncbiprotein

position:4673966:-1
position: 4673966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4730936:-1
position: 4730936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4730660-4730936:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4727751-4727877:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4723423-4723538:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4715663-4715788:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4713351-4713450:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4709779-4709823:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4685215-4685338:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4683858-4683961:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4683269-4683365:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4680503-4680652:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4678665-4678842:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4673966-4674033:-1:exon

NOCT
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: NOCT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4949798..4958420
location: region:4949798-4958420:1
so has part: feature:4949798-4958420:1:exon
subclass of: SO_0000010

103525356
type: Gene
SIO_000068: ncbigene

position:4949798:1
position: 4949798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4958420:1
position: 4958420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4949798-4958420:1:exon

NOCT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NOCT
product: nocturnin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030450539.1
SIO_010081: NOCT
subclass of: SO_0000673
so part of: NOCT
location: join(4949798..4950227,4955289..4955558,4956289..4958420)
location: region:4949798-4958420:1
so has part: feature:4949798-4950227:1:exon
so has part: feature:4955289-4955558:1:exon
so has part: feature:4956289-4958420:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4949798-4950227:1:exon

position:4950227:1
position: 4950227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4955289-4955558:1:exon

position:4955289:1
position: 4955289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4955558:1
position: 4955558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4956289-4958420:1:exon

position:4956289:1
position: 4956289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NOCT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NOCT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nocturnin
translation: MYQSPARCLCSALPALCCAPAAAPRLPRPLGLSAPRAAPVPVPAVGRPPAPGAPPRTVCSMGNSTSRLYSTLAKTLSSGAVSQHQDCLEQQDSARLDPIDPKDLLEECQMVLQKRPPRFQRDFVDLKKNTASNHRPIRVMQWNILAQALGEGKDNFVQCPMEALKWEERKCLILEEILAYKPDILCLQEVDHYFDTFEPLLSRLGYQGTFFPKPWSPCLDVERNNGPDGCALFFLRARFELINSANIRLTARKLKTNQVAIAQTLKCNETGRLFCIAVTHLKARTGWESFRSAQGCDLLQNLKSITQGAKIPLIVCGDFNAEPTEEVYREFSNSSLNLNSAYKLLSPDGQSEPPYTTWKIRPSGECRHTLDYIWYSQHALNVNSALGLLTEEQIGPNRLPSFNYPSDHLSLVCDFSFNQDPDRLL
SIO_010081: NOCT
subclass of: SO_0000673
so part of: NOCT
location: join(4950056..4950227,4955289..4955558,4956289..4957124)
location: region:4950056-4957124:1
so has part: feature:4950056-4950227:1:exon
so has part: feature:4955289-4955558:1:exon
so has part: feature:4956289-4957124:1:exon

XP_030306399.1
type: Protein
SIO_000068: ncbiprotein

position:4950056:1
position: 4950056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4957124:1
position: 4957124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4950056-4950227:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4955289-4955558:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4956289-4957124:1:exon

ELF2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ELF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4964052..5001850)
location: region:4964052-5001850:-1
so has part: feature:4964052-5001850:-1:exon
subclass of: SO_0000010

103525344
type: Gene
SIO_000068: ncbigene

position:4964052:-1
position: 4964052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5001850:-1
position: 5001850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4964052-5001850:-1:exon

ELF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ELF2
product: E74 like ETS transcription factor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 1 long SRA read, 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030450418.1
SIO_010081: ELF2
subclass of: SO_0000673
so part of: ELF2
location: complement(join(4964052..4965779,4966235..4966588,4966957..4967149,4971141..4971227,4972092..4972265,4973443..4973556,4992921..4993086,4993922..4994097,5001649..5001850))
location: region:4964052-5001850:-1
so has part: feature:5001649-5001850:-1:exon
so has part: feature:4993922-4994097:-1:exon
so has part: feature:4992921-4993086:-1:exon
so has part: feature:4973443-4973556:-1:exon
so has part: feature:4972092-4972265:-1:exon
so has part: feature:4971141-4971227:-1:exon
so has part: feature:4966957-4967149:-1:exon
so has part: feature:4966235-4966588:-1:exon
so has part: feature:4964052-4965779:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5001649-5001850:-1:exon

position:5001649:-1
position: 5001649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4993922-4994097:-1:exon

position:4993922:-1
position: 4993922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4994097:-1
position: 4994097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4992921-4993086:-1:exon

position:4992921:-1
position: 4992921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4993086:-1
position: 4993086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4973443-4973556:-1:exon

position:4973443:-1
position: 4973443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4973556:-1
position: 4973556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4972092-4972265:-1:exon

position:4972092:-1
position: 4972092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4972265:-1
position: 4972265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4971141-4971227:-1:exon

position:4971141:-1
position: 4971141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4971227:-1
position: 4971227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4966957-4967149:-1:exon

position:4966957:-1
position: 4966957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4967149:-1
position: 4967149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4966235-4966588:-1:exon

position:4966235:-1
position: 4966235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4966588:-1
position: 4966588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4964052-4965779:-1:exon

position:4965779:-1
position: 4965779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ELF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ELF2
product: E74 like ETS transcription factor 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030450424.1
SIO_010081: ELF2
subclass of: SO_0000673
so part of: ELF2
location: complement(join(4964052..4965779,4966235..4966588,4966957..4967149,4971141..4971227,4972092..4972265,4973443..4973556,5001649..5001796))
location: region:4964052-5001796:-1
so has part: feature:5001649-5001796:-1:exon
so has part: feature:4973443-4973556:-1:exon
so has part: feature:4972092-4972265:-1:exon
so has part: feature:4971141-4971227:-1:exon
so has part: feature:4966957-4967149:-1:exon
so has part: feature:4966235-4966588:-1:exon
so has part: feature:4964052-4965779:-1:exon

position:5001796:-1
position: 5001796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5001649-5001796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4973443-4973556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4972092-4972265:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4971141-4971227:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4966957-4967149:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4966235-4966588:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4964052-4965779:-1:exon

ELF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ELF2
product: E74 like ETS transcription factor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030450419.1
SIO_010081: ELF2
subclass of: SO_0000673
so part of: ELF2
location: complement(join(4964052..4965779,4966235..4966588,4966957..4967149,4971141..4971227,4972092..4972265,4973443..4973556,4992921..4993086,4993922..4994097,5000192..5000275,5001649..5001796))
location: region:4964052-5001796:-1
so has part: feature:5001649-5001796:-1:exon
so has part: feature:5000192-5000275:-1:exon
so has part: feature:4993922-4994097:-1:exon
so has part: feature:4992921-4993086:-1:exon
so has part: feature:4973443-4973556:-1:exon
so has part: feature:4972092-4972265:-1:exon
so has part: feature:4971141-4971227:-1:exon
so has part: feature:4966957-4967149:-1:exon
so has part: feature:4966235-4966588:-1:exon
so has part: feature:4964052-4965779:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5001649-5001796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5000192-5000275:-1:exon

position:5000192:-1
position: 5000192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5000275:-1
position: 5000275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4993922-4994097:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4992921-4993086:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4973443-4973556:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4972092-4972265:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4971141-4971227:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4966957-4967149:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4966235-4966588:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4964052-4965779:-1:exon

ELF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ELF2
product: E74 like ETS transcription factor 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030450420.1
SIO_010081: ELF2
subclass of: SO_0000673
so part of: ELF2
location: complement(join(4964052..4965779,4966235..4966588,4966957..4967149,4971141..4971227,4972092..4972265,4973443..4973556,4992921..4993086,4993922..4994097,5001644..5001796))
location: region:4964052-5001796:-1
so has part: feature:5001644-5001796:-1:exon
so has part: feature:4993922-4994097:-1:exon
so has part: feature:4992921-4993086:-1:exon
so has part: feature:4973443-4973556:-1:exon
so has part: feature:4972092-4972265:-1:exon
so has part: feature:4971141-4971227:-1:exon
so has part: feature:4966957-4967149:-1:exon
so has part: feature:4966235-4966588:-1:exon
so has part: feature:4964052-4965779:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5001644-5001796:-1:exon

position:5001644:-1
position: 5001644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4993922-4994097:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4992921-4993086:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4973443-4973556:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4972092-4972265:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4971141-4971227:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4966957-4967149:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4966235-4966588:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4964052-4965779:-1:exon

ELF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ELF2
product: E74 like ETS transcription factor 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030450422.1
SIO_010081: ELF2
subclass of: SO_0000673
so part of: ELF2
location: complement(join(4964052..4965779,4966235..4966588,4966957..4967149,4971141..4971227,4972092..4972265,4973443..4973556,4992921..4993086,4993922..4994097,5000192..5000275,5000927..5001035))
location: region:4964052-5001035:-1
so has part: feature:5000927-5001035:-1:exon
so has part: feature:5000192-5000275:-1:exon
so has part: feature:4993922-4994097:-1:exon
so has part: feature:4992921-4993086:-1:exon
so has part: feature:4973443-4973556:-1:exon
so has part: feature:4972092-4972265:-1:exon
so has part: feature:4971141-4971227:-1:exon
so has part: feature:4966957-4967149:-1:exon
so has part: feature:4966235-4966588:-1:exon
so has part: feature:4964052-4965779:-1:exon

position:5001035:-1
position: 5001035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5000927-5001035:-1:exon

position:5000927:-1
position: 5000927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5000192-5000275:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4993922-4994097:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4992921-4993086:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4973443-4973556:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4972092-4972265:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4971141-4971227:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4966957-4967149:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4966235-4966588:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4964052-4965779:-1:exon

ELF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ELF2
product: E74 like ETS transcription factor 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030450425.1
SIO_010081: ELF2
subclass of: SO_0000673
so part of: ELF2
location: complement(join(4964052..4965779,4966235..4966588,4966957..4967149,4971141..4971227,4972092..4972265,4973443..4973556,4987700..4987780))
location: region:4964052-4987780:-1
so has part: feature:4987700-4987780:-1:exon
so has part: feature:4973443-4973556:-1:exon
so has part: feature:4972092-4972265:-1:exon
so has part: feature:4971141-4971227:-1:exon
so has part: feature:4966957-4967149:-1:exon
so has part: feature:4966235-4966588:-1:exon
so has part: feature:4964052-4965779:-1:exon

position:4987780:-1
position: 4987780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4987700-4987780:-1:exon

position:4987700:-1
position: 4987700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4973443-4973556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4972092-4972265:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4971141-4971227:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4966957-4967149:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4966235-4966588:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4964052-4965779:-1:exon

ELF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ELF2
product: E74 like ETS transcription factor 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_030450423.1
SIO_010081: ELF2
subclass of: SO_0000673
so part of: ELF2
location: complement(join(4964052..4965779,4966235..4966588,4966957..4967149,4971141..4971227,4972092..4972265,4973443..4973556,4980594..4980744))
location: region:4964052-4980744:-1
so has part: feature:4980594-4980744:-1:exon
so has part: feature:4973443-4973556:-1:exon
so has part: feature:4972092-4972265:-1:exon
so has part: feature:4971141-4971227:-1:exon
so has part: feature:4966957-4967149:-1:exon
so has part: feature:4966235-4966588:-1:exon
so has part: feature:4964052-4965779:-1:exon

position:4980744:-1
position: 4980744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4980594-4980744:-1:exon

position:4980594:-1
position: 4980594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4973443-4973556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4972092-4972265:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4971141-4971227:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4966957-4967149:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4966235-4966588:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4964052-4965779:-1:exon

ELF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ELF2
product: E74 like ETS transcription factor 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030450426.1
SIO_010081: ELF2
subclass of: SO_0000673
so part of: ELF2
location: complement(join(4964052..4965779,4966235..4966588,4966957..4967149,4971141..4971227,4972092..4972265,4973443..4973556,4979428..4979450))
location: region:4964052-4979450:-1
so has part: feature:4979428-4979450:-1:exon
so has part: feature:4973443-4973556:-1:exon
so has part: feature:4972092-4972265:-1:exon
so has part: feature:4971141-4971227:-1:exon
so has part: feature:4966957-4967149:-1:exon
so has part: feature:4966235-4966588:-1:exon
so has part: feature:4964052-4965779:-1:exon

position:4979450:-1
position: 4979450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4979428-4979450:-1:exon

position:4979428:-1
position: 4979428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4973443-4973556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4972092-4972265:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4971141-4971227:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4966957-4967149:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4966235-4966588:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4964052-4965779:-1:exon

ELF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ELF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ETS-related transcription factor Elf-2 isoform X1
translation: MTSAVIDTGGSGLEFDSNGIKKQEENEPVSEFPAVIVEPVPSARLEQGYAAQVLVYDDETYLMQDVAEEQEVETETVETVEASVHGSNVHCTDKTIEAAEALLHMESPTCLRDARSPVEVFVPPCVSTPEFIHAAMRPDVITETVVEVSTEESEPMDASPVPTSPDIHEPMKKKKAGRKPKTQQSAVSDGSPDLGIKKKPREGKGNTTYLWEFLLDLLQDKNTCPRYIKWTQREKGIFKLVDSKAVSKLWGKHKNKPDMNYETMGRALRYYYQRGILAKVEGQRLVYQFKEMPKNIVVIDDDKSEPCNEDLSMPTDEKSLERVSLSAENLLKAATSARGGKNSSQLSCTRTEKAVTRVVNIASPVHDTSSSRSSTTTTTVPATTAPRTVRVAMQVPVVMTSLGQKISTVAVQSVNTGSPLLTNTSPTTATTPKVVIQTIPTVMPASAENGDKITVQPAKIITIPATQLTQCQLQTKTSLSGSGSINIVGTPLAVRALTPVSIAHGTPVMRLSVPAQQASGQTPPRVISAVIKSPEVKSDATALKQEREVKTLQLVNEEKPADGSKTVTHVVVVSTPSAIALPVTMKSEGIVTCEK
SIO_010081: ELF2
subclass of: SO_0000673
so part of: ELF2
location: complement(join(4965152..4965779,4966235..4966588,4966957..4967149,4971141..4971227,4972092..4972265,4973443..4973556,4992921..4993086,4993922..4993993))
location: region:4965152-4993993:-1
so has part: feature:4993922-4993993:-1:exon
so has part: feature:4992921-4993086:-1:exon
so has part: feature:4973443-4973556:-1:exon
so has part: feature:4972092-4972265:-1:exon
so has part: feature:4971141-4971227:-1:exon
so has part: feature:4966957-4967149:-1:exon
so has part: feature:4966235-4966588:-1:exon
so has part: feature:4965152-4965779:-1:exon

XP_030306278.1
type: Protein
SIO_000068: ncbiprotein

position:4965152:-1
position: 4965152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4993993:-1
position: 4993993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4993922-4993993:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4992921-4993086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4973443-4973556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4972092-4972265:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4971141-4971227:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4966957-4967149:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4966235-4966588:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4965152-4965779:-1:exon

ELF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ELF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ETS-related transcription factor Elf-2 isoform X1
translation: MTSAVIDTGGSGLEFDSNGIKKQEENEPVSEFPAVIVEPVPSARLEQGYAAQVLVYDDETYLMQDVAEEQEVETETVETVEASVHGSNVHCTDKTIEAAEALLHMESPTCLRDARSPVEVFVPPCVSTPEFIHAAMRPDVITETVVEVSTEESEPMDASPVPTSPDIHEPMKKKKAGRKPKTQQSAVSDGSPDLGIKKKPREGKGNTTYLWEFLLDLLQDKNTCPRYIKWTQREKGIFKLVDSKAVSKLWGKHKNKPDMNYETMGRALRYYYQRGILAKVEGQRLVYQFKEMPKNIVVIDDDKSEPCNEDLSMPTDEKSLERVSLSAENLLKAATSARGGKNSSQLSCTRTEKAVTRVVNIASPVHDTSSSRSSTTTTTVPATTAPRTVRVAMQVPVVMTSLGQKISTVAVQSVNTGSPLLTNTSPTTATTPKVVIQTIPTVMPASAENGDKITVQPAKIITIPATQLTQCQLQTKTSLSGSGSINIVGTPLAVRALTPVSIAHGTPVMRLSVPAQQASGQTPPRVISAVIKSPEVKSDATALKQEREVKTLQLVNEEKPADGSKTVTHVVVVSTPSAIALPVTMKSEGIVTCEK
SIO_010081: ELF2
subclass of: SO_0000673
so part of: ELF2
location: complement(join(4965152..4965779,4966235..4966588,4966957..4967149,4971141..4971227,4972092..4972265,4973443..4973556,4992921..4993086,4993922..4993993))
location: region:4965152-4993993:-1
so has part: feature:4993922-4993993:-1:exon
so has part: feature:4992921-4993086:-1:exon
so has part: feature:4973443-4973556:-1:exon
so has part: feature:4972092-4972265:-1:exon
so has part: feature:4971141-4971227:-1:exon
so has part: feature:4966957-4967149:-1:exon
so has part: feature:4966235-4966588:-1:exon
so has part: feature:4965152-4965779:-1:exon

XP_030306279.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4993922-4993993:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4992921-4993086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4973443-4973556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4972092-4972265:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4971141-4971227:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4966957-4967149:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4966235-4966588:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4965152-4965779:-1:exon

ELF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ELF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ETS-related transcription factor Elf-2 isoform X1
translation: MTSAVIDTGGSGLEFDSNGIKKQEENEPVSEFPAVIVEPVPSARLEQGYAAQVLVYDDETYLMQDVAEEQEVETETVETVEASVHGSNVHCTDKTIEAAEALLHMESPTCLRDARSPVEVFVPPCVSTPEFIHAAMRPDVITETVVEVSTEESEPMDASPVPTSPDIHEPMKKKKAGRKPKTQQSAVSDGSPDLGIKKKPREGKGNTTYLWEFLLDLLQDKNTCPRYIKWTQREKGIFKLVDSKAVSKLWGKHKNKPDMNYETMGRALRYYYQRGILAKVEGQRLVYQFKEMPKNIVVIDDDKSEPCNEDLSMPTDEKSLERVSLSAENLLKAATSARGGKNSSQLSCTRTEKAVTRVVNIASPVHDTSSSRSSTTTTTVPATTAPRTVRVAMQVPVVMTSLGQKISTVAVQSVNTGSPLLTNTSPTTATTPKVVIQTIPTVMPASAENGDKITVQPAKIITIPATQLTQCQLQTKTSLSGSGSINIVGTPLAVRALTPVSIAHGTPVMRLSVPAQQASGQTPPRVISAVIKSPEVKSDATALKQEREVKTLQLVNEEKPADGSKTVTHVVVVSTPSAIALPVTMKSEGIVTCEK
SIO_010081: ELF2
subclass of: SO_0000673
so part of: ELF2
location: complement(join(4965152..4965779,4966235..4966588,4966957..4967149,4971141..4971227,4972092..4972265,4973443..4973556,4992921..4993086,4993922..4993993))
location: region:4965152-4993993:-1
so has part: feature:4993922-4993993:-1:exon
so has part: feature:4992921-4993086:-1:exon
so has part: feature:4973443-4973556:-1:exon
so has part: feature:4972092-4972265:-1:exon
so has part: feature:4971141-4971227:-1:exon
so has part: feature:4966957-4967149:-1:exon
so has part: feature:4966235-4966588:-1:exon
so has part: feature:4965152-4965779:-1:exon

XP_030306280.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4993922-4993993:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4992921-4993086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4973443-4973556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4972092-4972265:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4971141-4971227:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4966957-4967149:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4966235-4966588:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4965152-4965779:-1:exon

ELF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ELF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ETS-related transcription factor Elf-2 isoform X1
translation: MTSAVIDTGGSGLEFDSNGIKKQEENEPVSEFPAVIVEPVPSARLEQGYAAQVLVYDDETYLMQDVAEEQEVETETVETVEASVHGSNVHCTDKTIEAAEALLHMESPTCLRDARSPVEVFVPPCVSTPEFIHAAMRPDVITETVVEVSTEESEPMDASPVPTSPDIHEPMKKKKAGRKPKTQQSAVSDGSPDLGIKKKPREGKGNTTYLWEFLLDLLQDKNTCPRYIKWTQREKGIFKLVDSKAVSKLWGKHKNKPDMNYETMGRALRYYYQRGILAKVEGQRLVYQFKEMPKNIVVIDDDKSEPCNEDLSMPTDEKSLERVSLSAENLLKAATSARGGKNSSQLSCTRTEKAVTRVVNIASPVHDTSSSRSSTTTTTVPATTAPRTVRVAMQVPVVMTSLGQKISTVAVQSVNTGSPLLTNTSPTTATTPKVVIQTIPTVMPASAENGDKITVQPAKIITIPATQLTQCQLQTKTSLSGSGSINIVGTPLAVRALTPVSIAHGTPVMRLSVPAQQASGQTPPRVISAVIKSPEVKSDATALKQEREVKTLQLVNEEKPADGSKTVTHVVVVSTPSAIALPVTMKSEGIVTCEK
SIO_010081: ELF2
subclass of: SO_0000673
so part of: ELF2
location: complement(join(4965152..4965779,4966235..4966588,4966957..4967149,4971141..4971227,4972092..4972265,4973443..4973556,4992921..4993086,4993922..4993993))
location: region:4965152-4993993:-1
so has part: feature:4993922-4993993:-1:exon
so has part: feature:4992921-4993086:-1:exon
so has part: feature:4973443-4973556:-1:exon
so has part: feature:4972092-4972265:-1:exon
so has part: feature:4971141-4971227:-1:exon
so has part: feature:4966957-4967149:-1:exon
so has part: feature:4966235-4966588:-1:exon
so has part: feature:4965152-4965779:-1:exon

XP_030306282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4993922-4993993:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4992921-4993086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4973443-4973556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4972092-4972265:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4971141-4971227:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4966957-4967149:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4966235-4966588:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4965152-4965779:-1:exon

ELF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ELF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ETS-related transcription factor Elf-2 isoform X2
translation: MATSLHEGPTNQLDLLIRAVEASVHGSNVHCTDKTIEAAEALLHMESPTCLRDARSPVEVFVPPCVSTPEFIHAAMRPDVITETVVEVSTEESEPMDASPVPTSPDIHEPMKKKKAGRKPKTQQSAVSDGSPDLGIKKKPREGKGNTTYLWEFLLDLLQDKNTCPRYIKWTQREKGIFKLVDSKAVSKLWGKHKNKPDMNYETMGRALRYYYQRGILAKVEGQRLVYQFKEMPKNIVVIDDDKSEPCNEDLSMPTDEKSLERVSLSAENLLKAATSARGGKNSSQLSCTRTEKAVTRVVNIASPVHDTSSSRSSTTTTTVPATTAPRTVRVAMQVPVVMTSLGQKISTVAVQSVNTGSPLLTNTSPTTATTPKVVIQTIPTVMPASAENGDKITVQPAKIITIPATQLTQCQLQTKTSLSGSGSINIVGTPLAVRALTPVSIAHGTPVMRLSVPAQQASGQTPPRVISAVIKSPEVKSDATALKQEREVKTLQLVNEEKPADGSKTVTHVVVVSTPSAIALPVTMKSEGIVTCEK
SIO_010081: ELF2
subclass of: SO_0000673
so part of: ELF2
location: complement(join(4965152..4965779,4966235..4966588,4966957..4967149,4971141..4971227,4972092..4972265,4973443..4973556,4980594..4980651))
location: region:4965152-4980651:-1
so has part: feature:4980594-4980651:-1:exon
so has part: feature:4973443-4973556:-1:exon
so has part: feature:4972092-4972265:-1:exon
so has part: feature:4971141-4971227:-1:exon
so has part: feature:4966957-4967149:-1:exon
so has part: feature:4966235-4966588:-1:exon
so has part: feature:4965152-4965779:-1:exon

XP_030306283.1
type: Protein
SIO_000068: ncbiprotein

position:4980651:-1
position: 4980651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4980594-4980651:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4973443-4973556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4972092-4972265:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4971141-4971227:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4966957-4967149:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4966235-4966588:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4965152-4965779:-1:exon

ELF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ELF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ETS-related transcription factor Elf-2 isoform X3
translation: MESPTCLRDARSPVEVFVPPCVSTPEFIHAAMRPDVITETVVEVSTEESEPMDASPVPTSPDIHEPMKKKKAGRKPKTQQSAVSDGSPDLGIKKKPREGKGNTTYLWEFLLDLLQDKNTCPRYIKWTQREKGIFKLVDSKAVSKLWGKHKNKPDMNYETMGRALRYYYQRGILAKVEGQRLVYQFKEMPKNIVVIDDDKSEPCNEDLSMPTDEKSLERVSLSAENLLKAATSARGGKNSSQLSCTRTEKAVTRVVNIASPVHDTSSSRSSTTTTTVPATTAPRTVRVAMQVPVVMTSLGQKISTVAVQSVNTGSPLLTNTSPTTATTPKVVIQTIPTVMPASAENGDKITVQPAKIITIPATQLTQCQLQTKTSLSGSGSINIVGTPLAVRALTPVSIAHGTPVMRLSVPAQQASGQTPPRVISAVIKSPEVKSDATALKQEREVKTLQLVNEEKPADGSKTVTHVVVVSTPSAIALPVTMKSEGIVTCEK
SIO_010081: ELF2
subclass of: SO_0000673
so part of: ELF2
location: complement(join(4965152..4965779,4966235..4966588,4966957..4967149,4971141..4971227,4972092..4972265,4973443..4973482))
location: region:4965152-4973482:-1
so has part: feature:4973443-4973482:-1:exon
so has part: feature:4972092-4972265:-1:exon
so has part: feature:4971141-4971227:-1:exon
so has part: feature:4966957-4967149:-1:exon
so has part: feature:4966235-4966588:-1:exon
so has part: feature:4965152-4965779:-1:exon

XP_030306284.1
type: Protein
SIO_000068: ncbiprotein

position:4973482:-1
position: 4973482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4973443-4973482:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4972092-4972265:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4971141-4971227:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4966957-4967149:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4966235-4966588:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4965152-4965779:-1:exon

ELF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ELF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ETS-related transcription factor Elf-2 isoform X3
translation: MESPTCLRDARSPVEVFVPPCVSTPEFIHAAMRPDVITETVVEVSTEESEPMDASPVPTSPDIHEPMKKKKAGRKPKTQQSAVSDGSPDLGIKKKPREGKGNTTYLWEFLLDLLQDKNTCPRYIKWTQREKGIFKLVDSKAVSKLWGKHKNKPDMNYETMGRALRYYYQRGILAKVEGQRLVYQFKEMPKNIVVIDDDKSEPCNEDLSMPTDEKSLERVSLSAENLLKAATSARGGKNSSQLSCTRTEKAVTRVVNIASPVHDTSSSRSSTTTTTVPATTAPRTVRVAMQVPVVMTSLGQKISTVAVQSVNTGSPLLTNTSPTTATTPKVVIQTIPTVMPASAENGDKITVQPAKIITIPATQLTQCQLQTKTSLSGSGSINIVGTPLAVRALTPVSIAHGTPVMRLSVPAQQASGQTPPRVISAVIKSPEVKSDATALKQEREVKTLQLVNEEKPADGSKTVTHVVVVSTPSAIALPVTMKSEGIVTCEK
SIO_010081: ELF2
subclass of: SO_0000673
so part of: ELF2
location: complement(join(4965152..4965779,4966235..4966588,4966957..4967149,4971141..4971227,4972092..4972265,4973443..4973482))
location: region:4965152-4973482:-1
so has part: feature:4973443-4973482:-1:exon
so has part: feature:4972092-4972265:-1:exon
so has part: feature:4971141-4971227:-1:exon
so has part: feature:4966957-4967149:-1:exon
so has part: feature:4966235-4966588:-1:exon
so has part: feature:4965152-4965779:-1:exon

XP_030306285.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4973443-4973482:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4972092-4972265:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4971141-4971227:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4966957-4967149:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4966235-4966588:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4965152-4965779:-1:exon

ELF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ELF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ETS-related transcription factor Elf-2 isoform X3
translation: MESPTCLRDARSPVEVFVPPCVSTPEFIHAAMRPDVITETVVEVSTEESEPMDASPVPTSPDIHEPMKKKKAGRKPKTQQSAVSDGSPDLGIKKKPREGKGNTTYLWEFLLDLLQDKNTCPRYIKWTQREKGIFKLVDSKAVSKLWGKHKNKPDMNYETMGRALRYYYQRGILAKVEGQRLVYQFKEMPKNIVVIDDDKSEPCNEDLSMPTDEKSLERVSLSAENLLKAATSARGGKNSSQLSCTRTEKAVTRVVNIASPVHDTSSSRSSTTTTTVPATTAPRTVRVAMQVPVVMTSLGQKISTVAVQSVNTGSPLLTNTSPTTATTPKVVIQTIPTVMPASAENGDKITVQPAKIITIPATQLTQCQLQTKTSLSGSGSINIVGTPLAVRALTPVSIAHGTPVMRLSVPAQQASGQTPPRVISAVIKSPEVKSDATALKQEREVKTLQLVNEEKPADGSKTVTHVVVVSTPSAIALPVTMKSEGIVTCEK
SIO_010081: ELF2
subclass of: SO_0000673
so part of: ELF2
location: complement(join(4965152..4965779,4966235..4966588,4966957..4967149,4971141..4971227,4972092..4972265,4973443..4973482))
location: region:4965152-4973482:-1
so has part: feature:4973443-4973482:-1:exon
so has part: feature:4972092-4972265:-1:exon
so has part: feature:4971141-4971227:-1:exon
so has part: feature:4966957-4967149:-1:exon
so has part: feature:4966235-4966588:-1:exon
so has part: feature:4965152-4965779:-1:exon

XP_030306286.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4973443-4973482:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4972092-4972265:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4971141-4971227:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4966957-4967149:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4966235-4966588:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4965152-4965779:-1:exon

MGARP
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: MGARP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5010346..5035481)
location: region:5010346-5035481:-1
so has part: feature:5010346-5035481:-1:exon
subclass of: SO_0000010

115598328
type: Gene
SIO_000068: ncbigene

position:5010346:-1
position: 5010346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5035481:-1
position: 5035481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5010346-5035481:-1:exon

MGARP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MGARP
product: mitochondria localized glutamic acid rich protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030450702.1
SIO_010081: MGARP
subclass of: SO_0000673
so part of: MGARP
location: complement(join(5010346..5011326,5014055..5014103,5014755..5014949,5027845..5028054,5032509..5032611,5033636..5033739,5035299..5035481))
location: region:5010346-5035481:-1
so has part: feature:5035299-5035481:-1:exon
so has part: feature:5033636-5033739:-1:exon
so has part: feature:5032509-5032611:-1:exon
so has part: feature:5027845-5028054:-1:exon
so has part: feature:5014755-5014949:-1:exon
so has part: feature:5014055-5014103:-1:exon
so has part: feature:5010346-5011326:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5035299-5035481:-1:exon

position:5035299:-1
position: 5035299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5033636-5033739:-1:exon

position:5033636:-1
position: 5033636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5033739:-1
position: 5033739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5032509-5032611:-1:exon

position:5032509:-1
position: 5032509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5032611:-1
position: 5032611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5027845-5028054:-1:exon

position:5027845:-1
position: 5027845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5028054:-1
position: 5028054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5014755-5014949:-1:exon

position:5014755:-1
position: 5014755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5014949:-1
position: 5014949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5014055-5014103:-1:exon

position:5014055:-1
position: 5014055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5014103:-1
position: 5014103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5010346-5011326:-1:exon

position:5011326:-1
position: 5011326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MGARP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MGARP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein MGARP
translation: MYLCRAASQTLASRLSRAPSAASRLKQRAPLRQMSSGSVPGSSGENMIYYLLAGAAAFGALFYAYREVTSSRRKYIEHVNILHERAEGRKGRAWSRRGDEEETDEVTEAETATEEAEAGAAAGPPAEDESVGGSPETGGESEAPEASPAVEEAQQEVAANSEAAAMQETVSEVSDVAAASDHEENTDSVEEGVTSEEGVTSMEEATSAAPEISDPSPRSPDLDAEVLEQTSEGSVEEKPPEEAPKEP
SIO_010081: MGARP
subclass of: SO_0000673
so part of: MGARP
location: complement(join(5014057..5014103,5014755..5014949,5027845..5028054,5032509..5032611,5033636..5033739,5035299..5035383))
location: region:5014057-5035383:-1
so has part: feature:5035299-5035383:-1:exon
so has part: feature:5033636-5033739:-1:exon
so has part: feature:5032509-5032611:-1:exon
so has part: feature:5027845-5028054:-1:exon
so has part: feature:5014755-5014949:-1:exon
so has part: feature:5014057-5014103:-1:exon

XP_030306562.1
type: Protein
SIO_000068: ncbiprotein

position:5014057:-1
position: 5014057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5035383:-1
position: 5035383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5035299-5035383:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5033636-5033739:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5032509-5032611:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5027845-5028054:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5014755-5014949:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5014057-5014103:-1:exon

NDUFC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: NDUFC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5037459..5040510)
location: region:5037459-5040510:-1
so has part: feature:5037459-5040510:-1:exon
subclass of: SO_0000010

103525343
type: Gene
SIO_000068: ncbigene

position:5037459:-1
position: 5037459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5040510:-1
position: 5040510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5037459-5040510:-1:exon

NDUFC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NDUFC1
product: NADH:ubiquinone oxidoreductase subunit C1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_030450640.1
SIO_010081: NDUFC1
subclass of: SO_0000673
so part of: NDUFC1
location: complement(join(5037459..5037595,5038268..5038350,5039752..5039855,5040318..5040510))
location: region:5037459-5040510:-1
so has part: feature:5040318-5040510:-1:exon
so has part: feature:5039752-5039855:-1:exon
so has part: feature:5038268-5038350:-1:exon
so has part: feature:5037459-5037595:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5040318-5040510:-1:exon

position:5040318:-1
position: 5040318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5039752-5039855:-1:exon

position:5039752:-1
position: 5039752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5039855:-1
position: 5039855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5038268-5038350:-1:exon

position:5038268:-1
position: 5038268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5038350:-1
position: 5038350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5037459-5037595:-1:exon

position:5037595:-1
position: 5037595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NDUFC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NDUFC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial
translation: MAPSAAGDGVEAGPSGTCGKRREGLRARQGGGRRRSGKMAAAVLGLTKRLRLVAGAPSLAFTRSAFVAKKRSYDQPNWFGVALAFGTSAALWAFLFKQHNDDVMEYERRKQERHHKCTECS
SIO_010081: NDUFC1
subclass of: SO_0000673
so part of: NDUFC1
location: complement(join(5037595,5038268..5038350,5039752..5039855,5040318..5040495))
location: region:5037595-5040495:-1
so has part: feature:5040318-5040495:-1:exon
so has part: feature:5039752-5039855:-1:exon
so has part: feature:5038268-5038350:-1:exon
so has part: feature:5037595-5037595:-1:exon

XP_030306500.1
type: Protein
SIO_000068: ncbiprotein

position:5040495:-1
position: 5040495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5040318-5040495:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5039752-5039855:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5038268-5038350:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5037595-5037595:-1:exon

NAA15
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: NAA15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5041031..5080163
location: region:5041031-5080163:1
so has part: feature:5041031-5080163:1:exon
subclass of: SO_0000010

103525355
type: Gene
SIO_000068: ncbigene

position:5041031:1
position: 5041031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5080163:1
position: 5080163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5041031-5080163:1:exon

NAA15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NAA15
product: N(alpha)-acetyltransferase 15, NatA auxiliary subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 29 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030450540.1
SIO_010081: NAA15
subclass of: SO_0000673
so part of: NAA15
location: join(5041031..5041281,5054814..5054898,5055748..5055852,5057303..5057460,5058836..5058970,5059135..5059288,5060964..5061083,5061715..5061810,5061945..5062051,5062498..5062570,5064596..5064765,5065405..5065557,5066869..5066997,5069680..5069893,5070860..5071053,5071353..5071388,5072645..5072753,5073315..5073413,5074081..5074224,5075243..5075340,5078646..5080163)
location: region:5041031-5080163:1
so has part: feature:5041031-5041281:1:exon
so has part: feature:5054814-5054898:1:exon
so has part: feature:5055748-5055852:1:exon
so has part: feature:5057303-5057460:1:exon
so has part: feature:5058836-5058970:1:exon
so has part: feature:5059135-5059288:1:exon
so has part: feature:5060964-5061083:1:exon
so has part: feature:5061715-5061810:1:exon
so has part: feature:5061945-5062051:1:exon
so has part: feature:5062498-5062570:1:exon
so has part: feature:5064596-5064765:1:exon
so has part: feature:5065405-5065557:1:exon
so has part: feature:5066869-5066997:1:exon
so has part: feature:5069680-5069893:1:exon
so has part: feature:5070860-5071053:1:exon
so has part: feature:5071353-5071388:1:exon
so has part: feature:5072645-5072753:1:exon
so has part: feature:5073315-5073413:1:exon
so has part: feature:5074081-5074224:1:exon
so has part: feature:5075243-5075340:1:exon
so has part: feature:5078646-5080163:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5041031-5041281:1:exon

position:5041281:1
position: 5041281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5054814-5054898:1:exon

position:5054814:1
position: 5054814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5054898:1
position: 5054898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5055748-5055852:1:exon

position:5055748:1
position: 5055748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5055852:1
position: 5055852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5057303-5057460:1:exon

position:5057303:1
position: 5057303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5057460:1
position: 5057460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5058836-5058970:1:exon

position:5058836:1
position: 5058836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5058970:1
position: 5058970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5059135-5059288:1:exon

position:5059135:1
position: 5059135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5059288:1
position: 5059288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5060964-5061083:1:exon

position:5060964:1
position: 5060964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5061083:1
position: 5061083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5061715-5061810:1:exon

position:5061715:1
position: 5061715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5061810:1
position: 5061810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5061945-5062051:1:exon

position:5061945:1
position: 5061945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5062051:1
position: 5062051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5062498-5062570:1:exon

position:5062498:1
position: 5062498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5062570:1
position: 5062570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5064596-5064765:1:exon

position:5064596:1
position: 5064596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5064765:1
position: 5064765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5065405-5065557:1:exon

position:5065405:1
position: 5065405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5065557:1
position: 5065557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5066869-5066997:1:exon

position:5066869:1
position: 5066869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5066997:1
position: 5066997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5069680-5069893:1:exon

position:5069680:1
position: 5069680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5069893:1
position: 5069893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5070860-5071053:1:exon

position:5070860:1
position: 5070860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5071053:1
position: 5071053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5071353-5071388:1:exon

position:5071353:1
position: 5071353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5071388:1
position: 5071388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5072645-5072753:1:exon

position:5072645:1
position: 5072645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5072753:1
position: 5072753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5073315-5073413:1:exon

position:5073315:1
position: 5073315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5073413:1
position: 5073413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5074081-5074224:1:exon

position:5074081:1
position: 5074081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5074224:1
position: 5074224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5075243-5075340:1:exon

position:5075243:1
position: 5075243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5075340:1
position: 5075340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:5078646-5080163:1:exon

position:5078646:1
position: 5078646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NAA15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: NAA15
product: N(alpha)-acetyltransferase 15, NatA auxiliary subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 29 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_030450541.1
SIO_010081: NAA15
subclass of: SO_0000673
so part of: NAA15
location: join(5041031..5041281,5054814..5054898,5055748..5055852,5057303..5057460,5058836..5058970,5059135..5059288,5060964..5061083,5061715..5061810,5061945..5062051,5062498..5062570,5064596..5064765,5065405..5065557,5066869..5066997,5069680..5069893,5070860..5071053,5072645..5072753,5073315..5073413,5074081..5074224,5075243..5075340,5078646..5080163)
location: region:5041031-5080163:1
so has part: feature:5041031-5041281:1:exon
so has part: feature:5054814-5054898:1:exon
so has part: feature:5055748-5055852:1:exon
so has part: feature:5057303-5057460:1:exon
so has part: feature:5058836-5058970:1:exon
so has part: feature:5059135-5059288:1:exon
so has part: feature:5060964-5061083:1:exon
so has part: feature:5061715-5061810:1:exon
so has part: feature:5061945-5062051:1:exon
so has part: feature:5062498-5062570:1:exon
so has part: feature:5064596-5064765:1:exon
so has part: feature:5065405-5065557:1:exon
so has part: feature:5066869-5066997:1:exon
so has part: feature:5069680-5069893:1:exon
so has part: feature:5070860-5071053:1:exon
so has part: feature:5072645-5072753:1:exon
so has part: feature:5073315-5073413:1:exon
so has part: feature:5074081-5074224:1:exon
so has part: feature:5075243-5075340:1:exon
so has part: feature:5078646-5080163:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5041031-5041281:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5054814-5054898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5055748-5055852:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5057303-5057460:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5058836-5058970:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5059135-5059288:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5060964-5061083:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5061715-5061810:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5061945-5062051:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5062498-5062570:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5064596-5064765:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5065405-5065557:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5066869-5066997:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5069680-5069893:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5070860-5071053:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5072645-5072753:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5073315-5073413:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5074081-5074224:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5075243-5075340:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5078646-5080163:1:exon

NAA15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NAA15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-alpha-acetyltransferase 15, NatA auxiliary subunit isoform X1
translation: MPSVSLPPKENALFKRILRCYEHKQYRNGLKFCKQILSNPKFAEHGETLAMKGLTLNCLGKKEEAYELVRRGLRNDLKSHVCWHVYGLLQRSDKKYDEAIKCYRNALKWDKDNLQILRDLSLLQIQMRDLEGYRETRYQLLQLRPAQRASWIGYAIAYHLLEDYEMAAKILEEFRKTQQTSPDKVDYEYSELLLYQNQVLREAGLFKEALEHLCTYEKQICDKLAVEETKGELLLQLGRLEEAVEVYKGLQERNPENWAYYKGLEKALKPANMMERLKIYEEAWTKYPRGLVPRRLPLNFLSGEKFKECLDKFLRMNFSKGCPPVFNTLRSLYKDKEKVAIIEELVIGYETSLRSCRLFNPNDDGKEEPPTTLLWVQYYLAQHYDKIGQPSLALEYINAAIESTPTLIELFLVKAKIYKHAGNIKEAARWMDEAQALDTADRFINSKCAKYMLKANSIKEAEEMCSKFTREGTSAVENLNEMQCMWFQTECAQAYKAMNKFGEALKKCHEIERHFVEITDDQFDFHTYCMRKITLRSYVDLLKLEDVLRQHPFYFKAARIAIEIYLKLHDNPLTDENKEHEADTANMSDKELKKLRNKQRRAQKKAQLEEEKKNAEKEKQQRNQKKKKDDDDEEIGGPKEELIPEKLAKLNRWKSLYSVCKVEAPLEEAIKFLTPLKNLVKNKIETHLFAFEIYFRKEKFLLMLQSVKRAFAIDSSHPWLHECMIHLFSSVSESKDLPDAVRTVLNQEMNRLFGATNPKNFNEAFLKKNYDSLPHRLSAAKMMYYLDPSSQKRAVELAMTLDESLINRNLQTCMEVLEALCDGSLGDCKEASETYRANCHKLFPYALAFMPPGYEEDMKITVNGDSSAEPEELANEI
SIO_010081: NAA15
subclass of: SO_0000673
so part of: NAA15
location: join(5041228..5041281,5054814..5054898,5055748..5055852,5057303..5057460,5058836..5058970,5059135..5059288,5060964..5061083,5061715..5061810,5061945..5062051,5062498..5062570,5064596..5064765,5065405..5065557,5066869..5066997,5069680..5069893,5070860..5071053,5071353..5071388,5072645..5072753,5073315..5073413,5074081..5074224,5075243..5075340,5078646..5078846)
location: region:5041228-5078846:1
so has part: feature:5041228-5041281:1:exon
so has part: feature:5054814-5054898:1:exon
so has part: feature:5055748-5055852:1:exon
so has part: feature:5057303-5057460:1:exon
so has part: feature:5058836-5058970:1:exon
so has part: feature:5059135-5059288:1:exon
so has part: feature:5060964-5061083:1:exon
so has part: feature:5061715-5061810:1:exon
so has part: feature:5061945-5062051:1:exon
so has part: feature:5062498-5062570:1:exon
so has part: feature:5064596-5064765:1:exon
so has part: feature:5065405-5065557:1:exon
so has part: feature:5066869-5066997:1:exon
so has part: feature:5069680-5069893:1:exon
so has part: feature:5070860-5071053:1:exon
so has part: feature:5071353-5071388:1:exon
so has part: feature:5072645-5072753:1:exon
so has part: feature:5073315-5073413:1:exon
so has part: feature:5074081-5074224:1:exon
so has part: feature:5075243-5075340:1:exon
so has part: feature:5078646-5078846:1:exon

XP_030306400.1
type: Protein
SIO_000068: ncbiprotein

position:5041228:1
position: 5041228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5078846:1
position: 5078846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5041228-5041281:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5054814-5054898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5055748-5055852:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5057303-5057460:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5058836-5058970:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5059135-5059288:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5060964-5061083:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5061715-5061810:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5061945-5062051:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5062498-5062570:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5064596-5064765:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5065405-5065557:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5066869-5066997:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5069680-5069893:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5070860-5071053:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5071353-5071388:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5072645-5072753:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5073315-5073413:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5074081-5074224:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5075243-5075340:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5078646-5078846:1:exon

NAA15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: NAA15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-alpha-acetyltransferase 15, NatA auxiliary subunit isoform X2
translation: MPSVSLPPKENALFKRILRCYEHKQYRNGLKFCKQILSNPKFAEHGETLAMKGLTLNCLGKKEEAYELVRRGLRNDLKSHVCWHVYGLLQRSDKKYDEAIKCYRNALKWDKDNLQILRDLSLLQIQMRDLEGYRETRYQLLQLRPAQRASWIGYAIAYHLLEDYEMAAKILEEFRKTQQTSPDKVDYEYSELLLYQNQVLREAGLFKEALEHLCTYEKQICDKLAVEETKGELLLQLGRLEEAVEVYKGLQERNPENWAYYKGLEKALKPANMMERLKIYEEAWTKYPRGLVPRRLPLNFLSGEKFKECLDKFLRMNFSKGCPPVFNTLRSLYKDKEKVAIIEELVIGYETSLRSCRLFNPNDDGKEEPPTTLLWVQYYLAQHYDKIGQPSLALEYINAAIESTPTLIELFLVKAKIYKHAGNIKEAARWMDEAQALDTADRFINSKCAKYMLKANSIKEAEEMCSKFTREGTSAVENLNEMQCMWFQTECAQAYKAMNKFGEALKKCHEIERHFVEITDDQFDFHTYCMRKITLRSYVDLLKLEDVLRQHPFYFKAARIAIEIYLKLHDNPLTDENKEHEADTANMSDKELKKLRNKQRRAQKKAQLEEEKKNAEKEKQQRNQKKKKDDDDEEIGGPKEELIPEKLAKVEAPLEEAIKFLTPLKNLVKNKIETHLFAFEIYFRKEKFLLMLQSVKRAFAIDSSHPWLHECMIHLFSSVSESKDLPDAVRTVLNQEMNRLFGATNPKNFNEAFLKKNYDSLPHRLSAAKMMYYLDPSSQKRAVELAMTLDESLINRNLQTCMEVLEALCDGSLGDCKEASETYRANCHKLFPYALAFMPPGYEEDMKITVNGDSSAEPEELANEI
SIO_010081: NAA15
subclass of: SO_0000673
so part of: NAA15
location: join(5041228..5041281,5054814..5054898,5055748..5055852,5057303..5057460,5058836..5058970,5059135..5059288,5060964..5061083,5061715..5061810,5061945..5062051,5062498..5062570,5064596..5064765,5065405..5065557,5066869..5066997,5069680..5069893,5070860..5071053,5072645..5072753,5073315..5073413,5074081..5074224,5075243..5075340,5078646..5078846)
location: region:5041228-5078846:1
so has part: feature:5041228-5041281:1:exon
so has part: feature:5054814-5054898:1:exon
so has part: feature:5055748-5055852:1:exon
so has part: feature:5057303-5057460:1:exon
so has part: feature:5058836-5058970:1:exon
so has part: feature:5059135-5059288:1:exon
so has part: feature:5060964-5061083:1:exon
so has part: feature:5061715-5061810:1:exon
so has part: feature:5061945-5062051:1:exon
so has part: feature:5062498-5062570:1:exon
so has part: feature:5064596-5064765:1:exon
so has part: feature:5065405-5065557:1:exon
so has part: feature:5066869-5066997:1:exon
so has part: feature:5069680-5069893:1:exon
so has part: feature:5070860-5071053:1:exon
so has part: feature:5072645-5072753:1:exon
so has part: feature:5073315-5073413:1:exon
so has part: feature:5074081-5074224:1:exon
so has part: feature:5075243-5075340:1:exon
so has part: feature:5078646-5078846:1:exon

XP_030306401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5041228-5041281:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5054814-5054898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5055748-5055852:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5057303-5057460:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5058836-5058970:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5059135-5059288:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5060964-5061083:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5061715-5061810:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5061945-5062051:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5062498-5062570:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5064596-5064765:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5065405-5065557:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5066869-5066997:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5069680-5069893:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5070860-5071053:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5072645-5072753:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5073315-5073413:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5074081-5074224:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5075243-5075340:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5078646-5078846:1:exon

RAB33B
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: RAB33B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5094853..5103433
location: region:5094853-5103433:1
so has part: feature:5094853-5103433:1:exon
subclass of: SO_0000010

103525353
type: Gene
SIO_000068: ncbigene

position:5094853:1
position: 5094853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5103433:1
position: 5103433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5094853-5103433:1:exon

RAB33B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: RAB33B
product: RAB33B, member RAS oncogene family
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 3 long SRA reads, 16 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_008490306.2
SIO_010081: RAB33B
subclass of: SO_0000673
so part of: RAB33B
location: join(5094853..5095281,5100551..5103433)
location: region:5094853-5103433:1
so has part: feature:5094853-5095281:1:exon
so has part: feature:5100551-5103433:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5094853-5095281:1:exon

position:5095281:1
position: 5095281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5100551-5103433:1:exon

position:5100551:1
position: 5100551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAB33B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: RAB33B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-33B
translation: MMAAASDLESSLELSLTGSGALPGGLPPARSRIFKIIVIGDSNVGKTCLTYRFCAGRFPQRTEATIGVDFRERAVTIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNIASFHSLPLWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTDLAQKFADSQSMPLFETSAKNPNDNDHVEAIFMTLAHKLKSHKPLMLSQPPDCDEIHIKPEPKPAMSCWC
SIO_010081: RAB33B
subclass of: SO_0000673
so part of: RAB33B
location: join(5095033..5095281,5100551..5100994)
location: region:5095033-5100994:1
so has part: feature:5095033-5095281:1:exon
so has part: feature:5100551-5100994:1:exon

XP_008488528.2
type: Protein
SIO_000068: ncbiprotein

position:5095033:1
position: 5095033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5100994:1
position: 5100994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5095033-5095281:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5100551-5100994:1:exon

SETD7
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SETD7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5112056..5134367)
location: region:5112056-5134367:-1
so has part: feature:5112056-5134367:-1:exon
subclass of: SO_0000010

103525352
type: Gene
SIO_000068: ncbigene

position:5112056:-1
position: 5112056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5134367:-1
position: 5134367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5112056-5134367:-1:exon

SETD7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SETD7
product: SET domain containing 7, histone lysine methyltransferase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 16 ESTs, 6 long SRA reads, 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030450389.1
SIO_010081: SETD7
subclass of: SO_0000673
so part of: SETD7
location: complement(join(5112056..5118178,5119095..5119252,5119520..5119637,5120781..5120862,5121958..5122147,5124144..5124345,5128935..5129064,5134224..5134367))
location: region:5112056-5134367:-1
so has part: feature:5134224-5134367:-1:exon
so has part: feature:5128935-5129064:-1:exon
so has part: feature:5124144-5124345:-1:exon
so has part: feature:5121958-5122147:-1:exon
so has part: feature:5120781-5120862:-1:exon
so has part: feature:5119520-5119637:-1:exon
so has part: feature:5119095-5119252:-1:exon
so has part: feature:5112056-5118178:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5134224-5134367:-1:exon

position:5134224:-1
position: 5134224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5128935-5129064:-1:exon

position:5128935:-1
position: 5128935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5129064:-1
position: 5129064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5124144-5124345:-1:exon

position:5124144:-1
position: 5124144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5124345:-1
position: 5124345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5121958-5122147:-1:exon

position:5121958:-1
position: 5121958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5122147:-1
position: 5122147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5120781-5120862:-1:exon

position:5120781:-1
position: 5120781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5120862:-1
position: 5120862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5119520-5119637:-1:exon

position:5119520:-1
position: 5119520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5119637:-1
position: 5119637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5119095-5119252:-1:exon

position:5119095:-1
position: 5119095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5119252:-1
position: 5119252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5112056-5118178:-1:exon

position:5118178:-1
position: 5118178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SETD7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SETD7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase SETD7
translation: MDSDEETLEETVEGHLDDDGLPHGFCTVTYSSTDRFEGNFVHGEKNGRGKFFFFDGSTLEGYYVDDALQGQGIYTYEDGVVLHGTYVDGELNGPAQEYDSDGRLIFKGQYKDNIRHGVCWIYYPDGGSLVGEVNEDGEMTGEKIAYVYPDGKTAYLGRFIDGEMIEAKLATLTSVEDGKPQFEVVPGSPVYTFDKSTSSCISTNALLPDPYESERVYVDVSLISSAGEGLFSKIAAEASTVMSFYNGVRITHQEVDSRDWALNGNTISLDDETVIDVPEPYNHAAKYCASLGHKANHSFTPNCIYDPFVHPRFGPIKCIRTIRAVEKDEELTVAYGYDHNPAGQNGPEAPEWYQLELKAFQAAQQK
SIO_010081: SETD7
subclass of: SO_0000673
so part of: SETD7
location: complement(join(5117998..5118178,5119095..5119252,5119520..5119637,5120781..5120862,5121958..5122147,5124144..5124345,5128935..5129064,5134224..5134263))
location: region:5117998-5134263:-1
so has part: feature:5134224-5134263:-1:exon
so has part: feature:5128935-5129064:-1:exon
so has part: feature:5124144-5124345:-1:exon
so has part: feature:5121958-5122147:-1:exon
so has part: feature:5120781-5120862:-1:exon
so has part: feature:5119520-5119637:-1:exon
so has part: feature:5119095-5119252:-1:exon
so has part: feature:5117998-5118178:-1:exon

XP_030306249.1
type: Protein
SIO_000068: ncbiprotein

position:5117998:-1
position: 5117998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5134263:-1
position: 5134263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5134224-5134263:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5128935-5129064:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5124144-5124345:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5121958-5122147:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5120781-5120862:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5119520-5119637:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5119095-5119252:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5117998-5118178:-1:exon

MGST2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: MGST2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5156093..5167212
location: region:5156093-5167212:1
so has part: feature:5156093-5167212:1:exon
subclass of: SO_0000010

103525341
type: Gene
SIO_000068: ncbigene

position:5156093:1
position: 5156093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5167212:1
position: 5167212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5156093-5167212:1:exon

MGST2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MGST2
product: microsomal glutathione S-transferase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_008490295.2
SIO_010081: MGST2
subclass of: SO_0000673
so part of: MGST2
location: join(5156093..5156167,5161509..5161608,5163385..5163455,5165392..5165473,5167080..5167212)
location: region:5156093-5167212:1
so has part: feature:5156093-5156167:1:exon
so has part: feature:5161509-5161608:1:exon
so has part: feature:5163385-5163455:1:exon
so has part: feature:5165392-5165473:1:exon
so has part: feature:5167080-5167212:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5156093-5156167:1:exon

position:5156167:1
position: 5156167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5161509-5161608:1:exon

position:5161509:1
position: 5161509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5161608:1
position: 5161608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5163385-5163455:1:exon

position:5163385:1
position: 5163385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5163455:1
position: 5163455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5165392-5165473:1:exon

position:5165392:1
position: 5165392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5165473:1
position: 5165473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5167080-5167212:1:exon

position:5167080:1
position: 5167080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MGST2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MGST2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microsomal glutathione S-transferase 2
translation: MGADGIFLAAVSLLSALQQYHFAWLVRRSRMKHKVVPPAVTGAPEFDRTLRAQQNCVEFYPVFLTVLWTAGWFFNQELASFLGLLYLFACYKYFHGYMQSVRGRLTGFYLNVVILVLLITLGAAGIVNSFLDEYLEFSIMKKLHQLF
SIO_010081: MGST2
subclass of: SO_0000673
so part of: MGST2
location: join(5156110..5156167,5161509..5161608,5163385..5163455,5165392..5165473,5167080..5167212)
location: region:5156110-5167212:1
so has part: feature:5156110-5156167:1:exon
so has part: feature:5161509-5161608:1:exon
so has part: feature:5163385-5163455:1:exon
so has part: feature:5165392-5165473:1:exon
so has part: feature:5167080-5167212:1:exon

XP_008488517.2
type: Protein
SIO_000068: ncbiprotein

position:5156110:1
position: 5156110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5156110-5156167:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5161509-5161608:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5163385-5163455:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5165392-5165473:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5167080-5167212:1:exon

MAML3
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: MAML3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5171716..5420450)
location: region:5171716-5420450:-1
so has part: feature:5171716-5420450:-1:exon
subclass of: SO_0000010

103525340
type: Gene
SIO_000068: ncbigene

position:5171716:-1
position: 5171716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5420450:-1
position: 5420450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5171716-5420450:-1:exon

MAML3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MAML3
product: mastermind like transcriptional coactivator 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030450806.1
SIO_010081: MAML3
subclass of: SO_0000673
so part of: MAML3
location: complement(join(5171716..5173986,5177204..5177288,5179240..5179488,5259705..5261183,5419162..5420450))
location: region:5171716-5420450:-1
so has part: feature:5419162-5420450:-1:exon
so has part: feature:5259705-5261183:-1:exon
so has part: feature:5179240-5179488:-1:exon
so has part: feature:5177204-5177288:-1:exon
so has part: feature:5171716-5173986:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5419162-5420450:-1:exon

position:5419162:-1
position: 5419162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5259705-5261183:-1:exon

position:5259705:-1
position: 5259705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5261183:-1
position: 5261183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5179240-5179488:-1:exon

position:5179240:-1
position: 5179240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5179488:-1
position: 5179488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5177204-5177288:-1:exon

position:5177204:-1
position: 5177204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5177288:-1
position: 5177288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5171716-5173986:-1:exon

position:5173986:-1
position: 5173986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MAML3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MAML3
product: mastermind like transcriptional coactivator 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_008490294.2
SIO_010081: MAML3
subclass of: SO_0000673
so part of: MAML3
location: complement(join(5171716..5173986,5177204..5177291,5179240..5179488,5259705..5261183,5419162..5419611))
location: region:5171716-5419611:-1
so has part: feature:5419162-5419611:-1:exon
so has part: feature:5259705-5261183:-1:exon
so has part: feature:5179240-5179488:-1:exon
so has part: feature:5177204-5177291:-1:exon
so has part: feature:5171716-5173986:-1:exon

position:5419611:-1
position: 5419611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5419162-5419611:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5259705-5261183:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5179240-5179488:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5177204-5177291:-1:exon

position:5177291:-1
position: 5177291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5171716-5173986:-1:exon

MAML3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MAML3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mastermind-like protein 3 isoform X2
translation: MGDFAAPAAAANGSSLCINNNLNSSLSGAGGAGIGVNSTPHGPPPPPAAAPGNNNANSGGIPKHSTVVERLRQRIEGCRRHHVNCESRYQQAQAEQLELERRDTVSLYQRTLEQRAKKTGTGSKQQQHQSKQQQDAEPAAAEQRNHTLIMLQETVKRKLEGARSPLNGEQQNGVCDGSFSPTSKRIRKDVPGIEAINNLPNNLPLPAVSPLHQLDMKASLPLQNSGTHGSALEDLGKNGGLSEIKLPVNGCNELDDGFNILQNKELKQEPLDDPSCIDTSETSLSNQNKLFSDINLNDQEWQELIDELANTVPEDDIQDLFNEDFEEKKEPEFPRPATEAQESASVKSDPSHSPFAHVPLGSPQVRPSSSGPPFSNISTASSIASVSSAPPAPVPAGSPGNCVVQSPQTPSQAQTPARSGNGYLMNPTAGSAAGSGPGPVNMPSADLSPAEQLKQMAAQQQQRAKLMQQKQQQHPNQASSWSPVGPPSSPYGGPFGAEKPNSPMMYPQAFNNQNPIVPPMANNPQKTTMNNYLPQNHMNMIGQQPNNLGTNSLSKQPNMLSYGNTKPLSHFSAELSQRMTPPMANPSKNPMMPYIQQQQQSQQPQMQAQMAHLSEEQKRILIMKQKGMISQPMAYTTLPSLAQEQHQVGLSRSTGPMQPSVPGGSSSVVTGTNSGGPFLGSQPQAAIMKQMLIEQRAQLQVIEQQKQQFLREQRQQQQQQQILAEQLQQQSHLPRQHLQQQRSPYPVQQVNQFQGSPQDIAAVRNQAALQSMRTSRMLAQNASMMAMAPSQNPSTLPTTAGQSDIPMAPPYSNSSSSQPGMYTMSTGMSQVLQHPNQSGMNMAHSTGQGTRQPASGQAVGMVGSFGQNMLVNSALPQHQQQMKGPVGQVLSRPPAPRLQNLMGTVPQGTQNWQQRGLQGVPGRTNSEMGPFNNGTTYPMQAGQPRLSKQHFPQVLNQTVVDTSGTVRTLNPAMGRQLLQPLPGQQGASQARPMVMPAISQGVPTISGFSQPPTQQMPGGNFAQSSQGQAYERNPTQDISYNYGNEGAGGSFPSLAEGADLVDSIMKSGPGDEWIQELDELFGNPQ
SIO_010081: MAML3
subclass of: SO_0000673
so part of: MAML3
location: complement(join(5172992..5173986,5177204..5177288,5179240..5179488,5259705..5261183,5419162..5419611))
location: region:5172992-5419611:-1
so has part: feature:5419162-5419611:-1:exon
so has part: feature:5259705-5261183:-1:exon
so has part: feature:5179240-5179488:-1:exon
so has part: feature:5177204-5177288:-1:exon
so has part: feature:5172992-5173986:-1:exon

XP_030306666.1
type: Protein
SIO_000068: ncbiprotein

position:5172992:-1
position: 5172992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5419162-5419611:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5259705-5261183:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5179240-5179488:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5177204-5177288:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5172992-5173986:-1:exon

MAML3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MAML3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mastermind-like protein 3 isoform X1
translation: MGDFAAPAAAANGSSLCINNNLNSSLSGAGGAGIGVNSTPHGPPPPPAAAPGNNNANSGGIPKHSTVVERLRQRIEGCRRHHVNCESRYQQAQAEQLELERRDTVSLYQRTLEQRAKKTGTGSKQQQHQSKQQQDAEPAAAEQRNHTLIMLQETVKRKLEGARSPLNGEQQNGVCDGSFSPTSKRIRKDVPGIEAINNLPNNLPLPAVSPLHQLDMKASLPLQNSGTHGSALEDLGKNGGLSEIKLPVNGCNELDDGFNILQNKELKQEPLDDPSCIDTSETSLSNQNKLFSDINLNDQEWQELIDELANTVPEDDIQDLFNEDFEEKKEPEFPRPATEAQESASVKSDPSHSPFAHVPLGSPQVRPSSSGPPFSNISTASSIASVSSAPPAPVPAGSPGNCVVQSPQTPSQAQTPARSGNGYLMNPTAGSAAGSGPGPVNMPSADLSPAEQLKQMAAQQQQRAKLMQQKQQQHPNQASSWSPVGPPSSPYGGPFGAEKPNSPMMYPQAFNNQNPIVPPMANNPQKTTMNNYLPQNHMNMIGQQPNNLGTNSLSKQPNMLSYGNTKPLSHFSAELSQRMTPPMANPSKNPMMPYIQQQQQSQQPQMQAQMAHLSEEQKRILIMKQKGMISQPMAYTTLPSLAQEQHQVGLSRSTGPMQPSVPGGSSSVVTGTNSGGPFLGSQPQAAIMKQMLIEQRAQLQVIEQQKQQFLREQRQQQQQQQILAEQQLQQQSHLPRQHLQQQRSPYPVQQVNQFQGSPQDIAAVRNQAALQSMRTSRMLAQNASMMAMAPSQNPSTLPTTAGQSDIPMAPPYSNSSSSQPGMYTMSTGMSQVLQHPNQSGMNMAHSTGQGTRQPASGQAVGMVGSFGQNMLVNSALPQHQQQMKGPVGQVLSRPPAPRLQNLMGTVPQGTQNWQQRGLQGVPGRTNSEMGPFNNGTTYPMQAGQPRLSKQHFPQVLNQTVVDTSGTVRTLNPAMGRQLLQPLPGQQGASQARPMVMPAISQGVPTISGFSQPPTQQMPGGNFAQSSQGQAYERNPTQDISYNYGNEGAGGSFPSLAEGADLVDSIMKSGPGDEWIQELDELFGNPQ
SIO_010081: MAML3
subclass of: SO_0000673
so part of: MAML3
location: complement(join(5172992..5173986,5177204..5177291,5179240..5179488,5259705..5261183,5419162..5419611))
location: region:5172992-5419611:-1
so has part: feature:5419162-5419611:-1:exon
so has part: feature:5259705-5261183:-1:exon
so has part: feature:5179240-5179488:-1:exon
so has part: feature:5177204-5177291:-1:exon
so has part: feature:5172992-5173986:-1:exon

XP_008488516.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5419162-5419611:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5259705-5261183:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5179240-5179488:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5177204-5177291:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5172992-5173986:-1:exon

LOC115598346
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: LOC115598346
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5420682..5421550
location: region:5420682-5421550:1
so has part: feature:5420682-5421550:1:exon
subclass of: SO_0000011

115598346
type: Gene
SIO_000068: ncbigene

position:5420682:1
position: 5420682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5421550:1
position: 5421550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5420682-5421550:1:exon

LOC115598346
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9244
nc RNA class: lncRNA
gene: LOC115598346
product: uncharacterized LOC115598346
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_003987588.1
SIO_010081: LOC115598346
subclass of: SO_0000673
so part of: LOC115598346
location: join(5420682..5420803,5421331..5421550)
location: region:5420682-5421550:1
so has part: feature:5420682-5420803:1:exon
so has part: feature:5421331-5421550:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5420682-5420803:1:exon

position:5420803:1
position: 5420803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5421331-5421550:1:exon

position:5421331:1
position: 5421331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SCOC
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: SCOC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5474036..5487856
location: region:5474036-5487856:1
so has part: feature:5474036-5487856:1:exon
subclass of: SO_0000010

103525339
type: Gene
SIO_000068: ncbigene

position:5474036:1
position: 5474036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5487856:1
position: 5487856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5474036-5487856:1:exon

SCOC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SCOC
product: short coiled-coil protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 1 long SRA read, 16 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_008490293.2
SIO_010081: SCOC
subclass of: SO_0000673
so part of: SCOC
location: join(5474036..5474124,5483929..5484000,5484104..5484187,5484735..5487122)
location: region:5474036-5487122:1
so has part: feature:5474036-5474124:1:exon
so has part: feature:5483929-5484000:1:exon
so has part: feature:5484104-5484187:1:exon
so has part: feature:5484735-5487122:1:exon

position:5487122:1
position: 5487122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5474036-5474124:1:exon

position:5474124:1
position: 5474124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5483929-5484000:1:exon

position:5483929:1
position: 5483929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5484000:1
position: 5484000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5484104-5484187:1:exon

position:5484104:1
position: 5484104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5484187:1
position: 5484187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5484735-5487122:1:exon

position:5484735:1
position: 5484735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SCOC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SCOC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: short coiled-coil protein isoform X1
translation: MELPLDEEDGTFTSIPLADDSEHPSGILSSRAERAHSTMMNADMDAVEAENRVELEEKTRLINQVLELQHTLEDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSKRK
SIO_010081: SCOC
subclass of: SO_0000673
so part of: SCOC
location: join(5474061..5474124,5483929..5484000,5484104..5484187,5484735..5484877)
location: region:5474061-5484877:1
so has part: feature:5474061-5474124:1:exon
so has part: feature:5483929-5484000:1:exon
so has part: feature:5484104-5484187:1:exon
so has part: feature:5484735-5484877:1:exon

XP_008488515.1
type: Protein
SIO_000068: ncbiprotein

position:5474061:1
position: 5474061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5484877:1
position: 5484877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5474061-5474124:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5483929-5484000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5484104-5484187:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5484735-5484877:1:exon

SCOC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SCOC
product: short coiled-coil protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 2 long SRA reads, 15 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_030450460.1
SIO_010081: SCOC
subclass of: SO_0000673
so part of: SCOC
location: join(5483213..5483314,5483926..5484000,5484104..5484187,5484735..5487856)
location: region:5483213-5487856:1
so has part: feature:5483213-5483314:1:exon
so has part: feature:5483926-5484000:1:exon
so has part: feature:5484104-5484187:1:exon
so has part: feature:5484735-5487856:1:exon

position:5483213:1
position: 5483213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5483213-5483314:1:exon

position:5483314:1
position: 5483314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5483926-5484000:1:exon

position:5483926:1
position: 5483926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5484104-5484187:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5484735-5487856:1:exon

SCOC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SCOC
product: short coiled-coil protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 4 long SRA reads, 15 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030450461.1
SIO_010081: SCOC
subclass of: SO_0000673
so part of: SCOC
location: join(5483223..5483314,5483929..5484000,5484104..5484187,5484735..5487856)
location: region:5483223-5487856:1
so has part: feature:5483223-5483314:1:exon
so has part: feature:5483929-5484000:1:exon
so has part: feature:5484104-5484187:1:exon
so has part: feature:5484735-5487856:1:exon

position:5483223:1
position: 5483223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5483223-5483314:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5483929-5484000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5484104-5484187:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5484735-5487856:1:exon

SCOC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SCOC
product: short coiled-coil protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 1 long SRA read, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030450462.1
SIO_010081: SCOC
subclass of: SO_0000673
so part of: SCOC
location: join(5483767..5483788,5483926..5484000,5484104..5484187,5484735..5487856)
location: region:5483767-5487856:1
so has part: feature:5483767-5483788:1:exon
so has part: feature:5483926-5484000:1:exon
so has part: feature:5484104-5484187:1:exon
so has part: feature:5484735-5487856:1:exon

position:5483767:1
position: 5483767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5483767-5483788:1:exon

position:5483788:1
position: 5483788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5483926-5484000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5484104-5484187:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5484735-5487856:1:exon

SCOC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: SCOC
product: short coiled-coil protein, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 1 long SRA read, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030450463.1
SIO_010081: SCOC
subclass of: SO_0000673
so part of: SCOC
location: join(5483775..5483788,5483929..5484000,5484104..5484187,5484735..5487856)
location: region:5483775-5487856:1
so has part: feature:5483775-5483788:1:exon
so has part: feature:5483929-5484000:1:exon
so has part: feature:5484104-5484187:1:exon
so has part: feature:5484735-5487856:1:exon

position:5483775:1
position: 5483775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5483775-5483788:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5483929-5484000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5484104-5484187:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5484735-5487856:1:exon

SCOC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SCOC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: short coiled-coil protein isoform X2
translation: MMNADMDAVEAENRVELEEKTRLINQVLELQHTLEDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSKRK
SIO_010081: SCOC
subclass of: SO_0000673
so part of: SCOC
location: join(5483979..5484000,5484104..5484187,5484735..5484877)
location: region:5483979-5484877:1
so has part: feature:5483979-5484000:1:exon
so has part: feature:5484104-5484187:1:exon
so has part: feature:5484735-5484877:1:exon

XP_030306320.1
type: Protein
SIO_000068: ncbiprotein

position:5483979:1
position: 5483979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5483979-5484000:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5484104-5484187:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5484735-5484877:1:exon

SCOC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SCOC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: short coiled-coil protein isoform X2
translation: MMNADMDAVEAENRVELEEKTRLINQVLELQHTLEDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSKRK
SIO_010081: SCOC
subclass of: SO_0000673
so part of: SCOC
location: join(5483979..5484000,5484104..5484187,5484735..5484877)
location: region:5483979-5484877:1
so has part: feature:5483979-5484000:1:exon
so has part: feature:5484104-5484187:1:exon
so has part: feature:5484735-5484877:1:exon

XP_030306321.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5483979-5484000:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5484104-5484187:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5484735-5484877:1:exon

SCOC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SCOC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: short coiled-coil protein isoform X2
translation: MMNADMDAVEAENRVELEEKTRLINQVLELQHTLEDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSKRK
SIO_010081: SCOC
subclass of: SO_0000673
so part of: SCOC
location: join(5483979..5484000,5484104..5484187,5484735..5484877)
location: region:5483979-5484877:1
so has part: feature:5483979-5484000:1:exon
so has part: feature:5484104-5484187:1:exon
so has part: feature:5484735-5484877:1:exon

XP_030306322.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5483979-5484000:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5484104-5484187:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5484735-5484877:1:exon

SCOC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: SCOC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: short coiled-coil protein isoform X2
translation: MMNADMDAVEAENRVELEEKTRLINQVLELQHTLEDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSKRK
SIO_010081: SCOC
subclass of: SO_0000673
so part of: SCOC
location: join(5483979..5484000,5484104..5484187,5484735..5484877)
location: region:5483979-5484877:1
so has part: feature:5483979-5484000:1:exon
so has part: feature:5484104-5484187:1:exon
so has part: feature:5484735-5484877:1:exon

XP_030306323.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5483979-5484000:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5484104-5484187:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5484735-5484877:1:exon

CLGN
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: CLGN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5488862..5515832)
location: region:5488862-5515832:-1
so has part: feature:5488862-5515832:-1:exon
subclass of: SO_0000010

103525351
type: Gene
SIO_000068: ncbigene

position:5488862:-1
position: 5488862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5515832:-1
position: 5515832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5488862-5515832:-1:exon

CLGN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: CLGN
product: calmegin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030450465.1
SIO_010081: CLGN
subclass of: SO_0000673
so part of: CLGN
location: complement(join(5488862..5489311,5491042..5491151,5493524..5493601,5495360..5495504,5495693..5495812,5497311..5497526,5498722..5498878,5499496..5499609,5500239..5500428,5502852..5503044,5504018..5504099,5504848..5504989,5507281..5507339,5510493..5510563,5512321..5512499,5515736..5515832))
location: region:5488862-5515832:-1
so has part: feature:5515736-5515832:-1:exon
so has part: feature:5512321-5512499:-1:exon
so has part: feature:5510493-5510563:-1:exon
so has part: feature:5507281-5507339:-1:exon
so has part: feature:5504848-5504989:-1:exon
so has part: feature:5504018-5504099:-1:exon
so has part: feature:5502852-5503044:-1:exon
so has part: feature:5500239-5500428:-1:exon
so has part: feature:5499496-5499609:-1:exon
so has part: feature:5498722-5498878:-1:exon
so has part: feature:5497311-5497526:-1:exon
so has part: feature:5495693-5495812:-1:exon
so has part: feature:5495360-5495504:-1:exon
so has part: feature:5493524-5493601:-1:exon
so has part: feature:5491042-5491151:-1:exon
so has part: feature:5488862-5489311:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5515736-5515832:-1:exon

position:5515736:-1
position: 5515736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5512321-5512499:-1:exon

position:5512321:-1
position: 5512321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5512499:-1
position: 5512499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5510493-5510563:-1:exon

position:5510493:-1
position: 5510493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5510563:-1
position: 5510563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5507281-5507339:-1:exon

position:5507281:-1
position: 5507281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5507339:-1
position: 5507339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5504848-5504989:-1:exon

position:5504848:-1
position: 5504848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5504989:-1
position: 5504989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5504018-5504099:-1:exon

position:5504018:-1
position: 5504018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5504099:-1
position: 5504099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5502852-5503044:-1:exon

position:5502852:-1
position: 5502852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5503044:-1
position: 5503044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5500239-5500428:-1:exon

position:5500239:-1
position: 5500239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5500428:-1
position: 5500428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5499496-5499609:-1:exon

position:5499496:-1
position: 5499496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5499609:-1
position: 5499609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5498722-5498878:-1:exon

position:5498722:-1
position: 5498722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5498878:-1
position: 5498878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5497311-5497526:-1:exon

position:5497311:-1
position: 5497311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5497526:-1
position: 5497526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5495693-5495812:-1:exon

position:5495693:-1
position: 5495693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5495812:-1
position: 5495812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5495360-5495504:-1:exon

position:5495360:-1
position: 5495360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5495504:-1
position: 5495504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5493524-5493601:-1:exon

position:5493524:-1
position: 5493524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5493601:-1
position: 5493601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5491042-5491151:-1:exon

position:5491042:-1
position: 5491042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5491151:-1
position: 5491151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5488862-5489311:-1:exon

position:5489311:-1
position: 5489311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CLGN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: CLGN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmegin
translation: MLFQWDWLCLGVLIMSSVTAEIENKEAPEADVEVEDFDKQAQEADVDRDKSSLQVVYETPKPTGEVYFTETFDGGLVGWVLSKTKKEDTDDNISKYDGRWEVEELKENRMSGDRGLVLKSVAKHHAISAMLTKAFIFNDKPLIVQYEVNFQEGIDCGGAYIKLLSSSDGLDLEYFFDKTPYTIMFGPDKCGEDYKLHFIFRHKNPKTGEYDEKHAKRPDVDLKKFYSDKKTHLYTLVLKPDDTFEMLIDQSVVGKGSLLEDMVPPVNPPKEIEDPSDKKPDDWDERPKIPDPNAVKPDDWDEDEPSKIEDSDAVKPEGWLDDEPQYVPDPNAKKPKDWDEEMDGEWEAPQIPNPKCETAPGCGLWVRPMKNNPKYKGKWKAPMIENPNYQGIWSPRKIPNPDYFEDPHPFKMTTISAIGLELWSMTSNIYFDNFIVCSEKEVADRWAADGWGLKKLVASANEPGMFSQLVTAAEDHPWLWVLYILTLALPVALGVLFCWPAKKTDEDYDLKKHDRPKAITKGELKQEIDELEEYEMELEEEKENEDTAENERREMEETKRELVNDTEKMGREASPSEDEGEGGEYIYHEEENEVADGSQEESFKSDKSGSEDEMKEADERPGSAEGPLKSVRKRRVRKD
SIO_010081: CLGN
subclass of: SO_0000673
so part of: CLGN
location: complement(join(5489231..5489311,5491042..5491151,5493524..5493601,5495360..5495504,5495693..5495812,5497311..5497526,5498722..5498878,5499496..5499609,5500239..5500428,5502852..5503044,5504018..5504099,5504848..5504989,5507281..5507339,5510493..5510563,5512321..5512482))
location: region:5489231-5512482:-1
so has part: feature:5512321-5512482:-1:exon
so has part: feature:5510493-5510563:-1:exon
so has part: feature:5507281-5507339:-1:exon
so has part: feature:5504848-5504989:-1:exon
so has part: feature:5504018-5504099:-1:exon
so has part: feature:5502852-5503044:-1:exon
so has part: feature:5500239-5500428:-1:exon
so has part: feature:5499496-5499609:-1:exon
so has part: feature:5498722-5498878:-1:exon
so has part: feature:5497311-5497526:-1:exon
so has part: feature:5495693-5495812:-1:exon
so has part: feature:5495360-5495504:-1:exon
so has part: feature:5493524-5493601:-1:exon
so has part: feature:5491042-5491151:-1:exon
so has part: feature:5489231-5489311:-1:exon

XP_030306325.1
type: Protein
SIO_000068: ncbiprotein

position:5489231:-1
position: 5489231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5512482:-1
position: 5512482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5512321-5512482:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5510493-5510563:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5507281-5507339:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5504848-5504989:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5504018-5504099:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5502852-5503044:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5500239-5500428:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5499496-5499609:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5498722-5498878:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5497311-5497526:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5495693-5495812:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5495360-5495504:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5493524-5493601:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5491042-5491151:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5489231-5489311:-1:exon

MGAT4D
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: MGAT4D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5520724..5553864)
location: region:5520724-5553864:-1
so has part: feature:5520724-5553864:-1:exon
subclass of: SO_0000010

103525350
type: Gene
SIO_000068: ncbigene

position:5520724:-1
position: 5520724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5553864:-1
position: 5553864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5520724-5553864:-1:exon

MGAT4D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: MGAT4D
product: MGAT4 family member D
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
transcript id: XM_030450684.1
SIO_010081: MGAT4D
subclass of: SO_0000673
so part of: MGAT4D
location: complement(join(5520724..5520750,5521372..5521484,5523018..5523096,5523218..5523296,5525358..5525551,5526882..5526989,5531307..5531437,5532324..5532435,5534428..5534503,5535749..5535862,5538788..5538834,5540914..5541047,5542829..5542958,5543285..5543289,5544376..5544537,5553774..5553864))
location: region:5520724-5553864:-1
so has part: feature:5553774-5553864:-1:exon
so has part: feature:5544376-5544537:-1:exon
so has part: feature:5543285-5543289:-1:exon
so has part: feature:5542829-5542958:-1:exon
so has part: feature:5540914-5541047:-1:exon
so has part: feature:5538788-5538834:-1:exon
so has part: feature:5535749-5535862:-1:exon
so has part: feature:5534428-5534503:-1:exon
so has part: feature:5532324-5532435:-1:exon
so has part: feature:5531307-5531437:-1:exon
so has part: feature:5526882-5526989:-1:exon
so has part: feature:5525358-5525551:-1:exon
so has part: feature:5523218-5523296:-1:exon
so has part: feature:5523018-5523096:-1:exon
so has part: feature:5521372-5521484:-1:exon
so has part: feature:5520724-5520750:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5553774-5553864:-1:exon

position:5553774:-1
position: 5553774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5544376-5544537:-1:exon

position:5544376:-1
position: 5544376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5544537:-1
position: 5544537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5543285-5543289:-1:exon

position:5543285:-1
position: 5543285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5543289:-1
position: 5543289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5542829-5542958:-1:exon

position:5542829:-1
position: 5542829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5542958:-1
position: 5542958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5540914-5541047:-1:exon

position:5540914:-1
position: 5540914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5541047:-1
position: 5541047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5538788-5538834:-1:exon

position:5538788:-1
position: 5538788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5538834:-1
position: 5538834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5535749-5535862:-1:exon

position:5535749:-1
position: 5535749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5535862:-1
position: 5535862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5534428-5534503:-1:exon

position:5534428:-1
position: 5534428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5534503:-1
position: 5534503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5532324-5532435:-1:exon

position:5532324:-1
position: 5532324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5532435:-1
position: 5532435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5531307-5531437:-1:exon

position:5531307:-1
position: 5531307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5531437:-1
position: 5531437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5526882-5526989:-1:exon

position:5526882:-1
position: 5526882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5526989:-1
position: 5526989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5525358-5525551:-1:exon

position:5525358:-1
position: 5525358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5525551:-1
position: 5525551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5523218-5523296:-1:exon

position:5523218:-1
position: 5523218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5523296:-1
position: 5523296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5523018-5523096:-1:exon

position:5523018:-1
position: 5523018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5523096:-1
position: 5523096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5521372-5521484:-1:exon

position:5521372:-1
position: 5521372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5521484:-1
position: 5521484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5520724-5520750:-1:exon

position:5520750:-1
position: 5520750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MGAT4D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: MGAT4D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like protein MGAT4D
translation: MRLRRGPLLAVLCLGTALPLLWSTAWEGNRGNDSDTFQSQFLELQQRLLDAEKENKKRSHELSHVLDELKHVVAKRMNFTRNDTGGWKELNLTRRLPIHLTNIYYYLPHLREYEDAIFPNVIFGQQRTGVSLVMGIPTVKRKKEDYLINTLQSLLYELSEEQKNSCLIIIFVAEVNAEYVNSVAESVKTSFPREIQSGVLEVISPPASYYPDLSNLKKTLGDSENRVRWRTKQNLDYSFLMLYAQPKGTFYLQLEDDIIAKSDYVESIKNFAAKQTQEWMILEFSQLGFIGKLFKSEDLPLIVEFFLMFYKDKPIDWLIDHLLWVKVCNPEKDAIHCEKEKDKLRIRAKPSLFQHVGIYSSLAGKIQNLKDKDFGKNVLYKAHNNPPAKVNTSLRIYHQHTLEKVYKGKDYFWALSPVAGDYISFTFLNPLKVEKYFFRSGNMEHPGDKLFNTTVEVLPADEILKKELVDNGSKFNYPATKDGYLKIGAFENGIAGGSVDQSLGKIQALRLSVSSDSPVWVILSEVLIKTSEN
SIO_010081: MGAT4D
subclass of: SO_0000673
so part of: MGAT4D
location: complement(join(5520724..5520750,5521372..5521484,5523018..5523096,5523218..5523296,5525358..5525551,5526882..5526989,5531307..5531437,5532324..5532435,5534428..5534503,5535749..5535862,5538788..5538834,5540914..5541047,5542829..5542958,5543285..5543289,5544376..5544537,5553774..5553864))
location: region:5520724-5553864:-1
so has part: feature:5553774-5553864:-1:exon
so has part: feature:5544376-5544537:-1:exon
so has part: feature:5543285-5543289:-1:exon
so has part: feature:5542829-5542958:-1:exon
so has part: feature:5540914-5541047:-1:exon
so has part: feature:5538788-5538834:-1:exon
so has part: feature:5535749-5535862:-1:exon
so has part: feature:5534428-5534503:-1:exon
so has part: feature:5532324-5532435:-1:exon
so has part: feature:5531307-5531437:-1:exon
so has part: feature:5526882-5526989:-1:exon
so has part: feature:5525358-5525551:-1:exon
so has part: feature:5523218-5523296:-1:exon
so has part: feature:5523018-5523096:-1:exon
so has part: feature:5521372-5521484:-1:exon
so has part: feature:5520724-5520750:-1:exon

XP_030306544.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5553774-5553864:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5544376-5544537:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5543285-5543289:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5542829-5542958:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5540914-5541047:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5538788-5538834:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5535749-5535862:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5534428-5534503:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5532324-5532435:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5531307-5531437:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5526882-5526989:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5525358-5525551:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5523218-5523296:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5523018-5523096:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5521372-5521484:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5520724-5520750:-1:exon

ELMOD2
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: ELMOD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5558676..5568751
location: region:5558676-5568751:1
so has part: feature:5558676-5568751:1:exon
subclass of: SO_0000010

103525349
type: Gene
SIO_000068: ncbigene

position:5558676:1
position: 5558676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5568751:1
position: 5568751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5558676-5568751:1:exon

ELMOD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ELMOD2
product: ELMO domain containing 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 long SRA read, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030450555.1
SIO_010081: ELMOD2
subclass of: SO_0000673
so part of: ELMOD2
location: join(5558676..5558718,5559135..5559282,5560123..5560151,5561095..5561189,5561995..5562124,5562927..5563060,5563678..5563746,5564268..5564401,5564732..5568751)
location: region:5558676-5568751:1
so has part: feature:5558676-5558718:1:exon
so has part: feature:5559135-5559282:1:exon
so has part: feature:5560123-5560151:1:exon
so has part: feature:5561095-5561189:1:exon
so has part: feature:5561995-5562124:1:exon
so has part: feature:5562927-5563060:1:exon
so has part: feature:5563678-5563746:1:exon
so has part: feature:5564268-5564401:1:exon
so has part: feature:5564732-5568751:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5558676-5558718:1:exon

position:5558718:1
position: 5558718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5559135-5559282:1:exon

position:5559135:1
position: 5559135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5559282:1
position: 5559282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5560123-5560151:1:exon

position:5560123:1
position: 5560123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5560151:1
position: 5560151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5561095-5561189:1:exon

position:5561095:1
position: 5561095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5561189:1
position: 5561189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5561995-5562124:1:exon

position:5561995:1
position: 5561995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5562124:1
position: 5562124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5562927-5563060:1:exon

position:5562927:1
position: 5562927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5563060:1
position: 5563060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5563678-5563746:1:exon

position:5563678:1
position: 5563678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5563746:1
position: 5563746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5564268-5564401:1:exon

position:5564268:1
position: 5564268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5564401:1
position: 5564401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5564732-5568751:1:exon

position:5564732:1
position: 5564732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ELMOD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ELMOD2
product: ELMO domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 long SRA reads, 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030450552.1
SIO_010081: ELMOD2
subclass of: SO_0000673
so part of: ELMOD2
location: join(5558708..5558936,5559135..5559282,5560123..5560151,5561095..5561189,5561995..5562124,5562927..5563060,5563678..5563746,5564268..5564401,5564732..5568751)
location: region:5558708-5568751:1
so has part: feature:5558708-5558936:1:exon
so has part: feature:5559135-5559282:1:exon
so has part: feature:5560123-5560151:1:exon
so has part: feature:5561095-5561189:1:exon
so has part: feature:5561995-5562124:1:exon
so has part: feature:5562927-5563060:1:exon
so has part: feature:5563678-5563746:1:exon
so has part: feature:5564268-5564401:1:exon
so has part: feature:5564732-5568751:1:exon

position:5558708:1
position: 5558708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5558708-5558936:1:exon

position:5558936:1
position: 5558936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5559135-5559282:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5560123-5560151:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5561095-5561189:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5561995-5562124:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5562927-5563060:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5563678-5563746:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5564268-5564401:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5564732-5568751:1:exon

ELMOD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ELMOD2
product: ELMO domain containing 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 long SRA read, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030450554.1
SIO_010081: ELMOD2
subclass of: SO_0000673
so part of: ELMOD2
location: join(5558731..5558782,5559135..5559282,5560123..5560151,5561095..5561189,5561995..5562124,5562927..5563060,5563678..5563746,5564268..5564401,5564732..5568751)
location: region:5558731-5568751:1
so has part: feature:5558731-5558782:1:exon
so has part: feature:5559135-5559282:1:exon
so has part: feature:5560123-5560151:1:exon
so has part: feature:5561095-5561189:1:exon
so has part: feature:5561995-5562124:1:exon
so has part: feature:5562927-5563060:1:exon
so has part: feature:5563678-5563746:1:exon
so has part: feature:5564268-5564401:1:exon
so has part: feature:5564732-5568751:1:exon

position:5558731:1
position: 5558731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5558731-5558782:1:exon

position:5558782:1
position: 5558782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5559135-5559282:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5560123-5560151:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5561095-5561189:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5561995-5562124:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5562927-5563060:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5563678-5563746:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5564268-5564401:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5564732-5568751:1:exon

ELMOD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: ELMOD2
product: ELMO domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 long SRA read, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030450553.1
SIO_010081: ELMOD2
subclass of: SO_0000673
so part of: ELMOD2
location: join(5558746..5558952,5559135..5559282,5560123..5560151,5561095..5561189,5561995..5562124,5562927..5563060,5563678..5563746,5564268..5564401,5564732..5568751)
location: region:5558746-5568751:1
so has part: feature:5558746-5558952:1:exon
so has part: feature:5559135-5559282:1:exon
so has part: feature:5560123-5560151:1:exon
so has part: feature:5561095-5561189:1:exon
so has part: feature:5561995-5562124:1:exon
so has part: feature:5562927-5563060:1:exon
so has part: feature:5563678-5563746:1:exon
so has part: feature:5564268-5564401:1:exon
so has part: feature:5564732-5568751:1:exon

position:5558746:1
position: 5558746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5558746-5558952:1:exon

position:5558952:1
position: 5558952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5559135-5559282:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5560123-5560151:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5561095-5561189:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5561995-5562124:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5562927-5563060:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5563678-5563746:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5564268-5564401:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5564732-5568751:1:exon

ELMOD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ELMOD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ELMO domain-containing protein 2
translation: MLVYFWGFLYSNYLRFWLKWIVRLLTGKCELQRLIGGSKAGAQRTLSIEYSLESSKNKVLRNAVKAEEAEVEKCVRDIMKEKKIEQKDTRFKTGLHISILQISGYKRLYLNVENLRKVPYDSENEEHEEQLIELWNLLMPHENLRARITKQWCDIGFQGDDPKTDFRGMGLLGLVNLVYFSKHYTHEARQILSRSNHPKLGYSYAIVGINLTEMAYSLLKNGALKPHVYNMVSGLPQMEHFHQFYCYLVYEFDKFWFEEEPESIMHFNHYREKFHEKIKGLLLDHDVVLTLQNTKKP
SIO_010081: ELMOD2
subclass of: SO_0000673
so part of: ELMOD2
location: join(5559138..5559282,5560123..5560151,5561095..5561189,5561995..5562124,5562927..5563060,5563678..5563746,5564268..5564401,5564732..5564889)
location: region:5559138-5564889:1
so has part: feature:5559138-5559282:1:exon
so has part: feature:5560123-5560151:1:exon
so has part: feature:5561095-5561189:1:exon
so has part: feature:5561995-5562124:1:exon
so has part: feature:5562927-5563060:1:exon
so has part: feature:5563678-5563746:1:exon
so has part: feature:5564268-5564401:1:exon
so has part: feature:5564732-5564889:1:exon

XP_030306412.1
type: Protein
SIO_000068: ncbiprotein

position:5559138:1
position: 5559138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5564889:1
position: 5564889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5559138-5559282:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5560123-5560151:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5561095-5561189:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5561995-5562124:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5562927-5563060:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5563678-5563746:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5564268-5564401:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5564732-5564889:1:exon

ELMOD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ELMOD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ELMO domain-containing protein 2
translation: MLVYFWGFLYSNYLRFWLKWIVRLLTGKCELQRLIGGSKAGAQRTLSIEYSLESSKNKVLRNAVKAEEAEVEKCVRDIMKEKKIEQKDTRFKTGLHISILQISGYKRLYLNVENLRKVPYDSENEEHEEQLIELWNLLMPHENLRARITKQWCDIGFQGDDPKTDFRGMGLLGLVNLVYFSKHYTHEARQILSRSNHPKLGYSYAIVGINLTEMAYSLLKNGALKPHVYNMVSGLPQMEHFHQFYCYLVYEFDKFWFEEEPESIMHFNHYREKFHEKIKGLLLDHDVVLTLQNTKKP
SIO_010081: ELMOD2
subclass of: SO_0000673
so part of: ELMOD2
location: join(5559138..5559282,5560123..5560151,5561095..5561189,5561995..5562124,5562927..5563060,5563678..5563746,5564268..5564401,5564732..5564889)
location: region:5559138-5564889:1
so has part: feature:5559138-5559282:1:exon
so has part: feature:5560123-5560151:1:exon
so has part: feature:5561095-5561189:1:exon
so has part: feature:5561995-5562124:1:exon
so has part: feature:5562927-5563060:1:exon
so has part: feature:5563678-5563746:1:exon
so has part: feature:5564268-5564401:1:exon
so has part: feature:5564732-5564889:1:exon

XP_030306413.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5559138-5559282:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5560123-5560151:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5561095-5561189:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5561995-5562124:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5562927-5563060:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5563678-5563746:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5564268-5564401:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5564732-5564889:1:exon

ELMOD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ELMOD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ELMO domain-containing protein 2
translation: MLVYFWGFLYSNYLRFWLKWIVRLLTGKCELQRLIGGSKAGAQRTLSIEYSLESSKNKVLRNAVKAEEAEVEKCVRDIMKEKKIEQKDTRFKTGLHISILQISGYKRLYLNVENLRKVPYDSENEEHEEQLIELWNLLMPHENLRARITKQWCDIGFQGDDPKTDFRGMGLLGLVNLVYFSKHYTHEARQILSRSNHPKLGYSYAIVGINLTEMAYSLLKNGALKPHVYNMVSGLPQMEHFHQFYCYLVYEFDKFWFEEEPESIMHFNHYREKFHEKIKGLLLDHDVVLTLQNTKKP
SIO_010081: ELMOD2
subclass of: SO_0000673
so part of: ELMOD2
location: join(5559138..5559282,5560123..5560151,5561095..5561189,5561995..5562124,5562927..5563060,5563678..5563746,5564268..5564401,5564732..5564889)
location: region:5559138-5564889:1
so has part: feature:5559138-5559282:1:exon
so has part: feature:5560123-5560151:1:exon
so has part: feature:5561095-5561189:1:exon
so has part: feature:5561995-5562124:1:exon
so has part: feature:5562927-5563060:1:exon
so has part: feature:5563678-5563746:1:exon
so has part: feature:5564268-5564401:1:exon
so has part: feature:5564732-5564889:1:exon

XP_030306414.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5559138-5559282:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5560123-5560151:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5561095-5561189:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5561995-5562124:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5562927-5563060:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5563678-5563746:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5564268-5564401:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5564732-5564889:1:exon

ELMOD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9244
gene: ELMOD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ELMO domain-containing protein 2
translation: MLVYFWGFLYSNYLRFWLKWIVRLLTGKCELQRLIGGSKAGAQRTLSIEYSLESSKNKVLRNAVKAEEAEVEKCVRDIMKEKKIEQKDTRFKTGLHISILQISGYKRLYLNVENLRKVPYDSENEEHEEQLIELWNLLMPHENLRARITKQWCDIGFQGDDPKTDFRGMGLLGLVNLVYFSKHYTHEARQILSRSNHPKLGYSYAIVGINLTEMAYSLLKNGALKPHVYNMVSGLPQMEHFHQFYCYLVYEFDKFWFEEEPESIMHFNHYREKFHEKIKGLLLDHDVVLTLQNTKKP
SIO_010081: ELMOD2
subclass of: SO_0000673
so part of: ELMOD2
location: join(5559138..5559282,5560123..5560151,5561095..5561189,5561995..5562124,5562927..5563060,5563678..5563746,5564268..5564401,5564732..5564889)
location: region:5559138-5564889:1
so has part: feature:5559138-5559282:1:exon
so has part: feature:5560123-5560151:1:exon
so has part: feature:5561095-5561189:1:exon
so has part: feature:5561995-5562124:1:exon
so has part: feature:5562927-5563060:1:exon
so has part: feature:5563678-5563746:1:exon
so has part: feature:5564268-5564401:1:exon
so has part: feature:5564732-5564889:1:exon

XP_030306415.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5559138-5559282:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5560123-5560151:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5561095-5561189:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5561995-5562124:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5562927-5563060:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5563678-5563746:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5564268-5564401:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5564732-5564889:1:exon

TBC1D9
type: Gene
subclass of: SO_0000704
RO_0002162: 9244
gene: TBC1D9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5573959..5618902)
location: region:5573959-5618902:-1
so has part: feature:5573959-5618902:-1:exon
subclass of: SO_0000010

103525348
type: Gene
SIO_000068: ncbigene

position:5573959:-1
position: 5573959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5618902:-1
position: 5618902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5573959-5618902:-1:exon

TBC1D9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9244
gene: TBC1D9
product: TBC1 domain family member 9, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 5 Proteins, and 30% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030450550.1
SIO_010081: TBC1D9
subclass of: SO_0000673
so part of: TBC1D9
location: complement(join(5573959..5574672,5575529..5575621,5575761..5575846,5577181..5577267,5578462..5578527,5581280..5581520,5583019..5583117,5584763..5584892,5586115..5586400,5587341..5587458,5589144..5589358,5590906..5591056,5591482..5591652,5593342..5593548,5596437..5596644,5597774..5598035,5598940..5599168,5600739..5600857,5604738..5604848,5618715..5618902))
location: region:5573959-5618902:-1
so has part: feature:5618715-5618902:-1:exon
so has part: feature:5604738-5604848:-1:exon
so has part: feature:5600739-5600857:-1:exon
so has part: feature:5598940-5599168:-1:exon
so has part: feature:5597774-5598035:-1:exon
so has part: feature:5596437-5596644:-1:exon
so has part: feature:5593342-5593548:-1:exon
so has part: feature:5591482-5591652:-1:exon
so has part: feature:5590906-5591056:-1:exon
so has part: feature:5589144-5589358:-1:exon
so has part: feature:5587341-5587458:-1:exon
so has part: feature:5586115-5586400:-1:exon
so has part: feature:5584763-5584892:-1:exon
so has part: feature:5583019-5583117:-1:exon
so has part: feature:5581280-5581520:-1:exon
so has part: feature:5578462-5578527:-1:exon
so has part: feature:5577181-5577267:-1:exon
so has part: feature:5575761-5575846:-1:exon
so has part: feature:5575529-5575621:-1:exon
so has part: feature:5573959-5574672:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5618715-5618902:-1:exon

position:5618715:-1
position: 5618715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5604738-5604848:-1:exon

position:5604738:-1
position: 5604738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5604848:-1
position: 5604848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5600739-5600857:-1:exon

position:5600739:-1
position: 5600739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5600857:-1
position: 5600857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5598940-5599168:-1:exon

position:5598940:-1
position: 5598940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5599168:-1
position: 5599168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5597774-5598035:-1:exon

position:5597774:-1
position: 5597774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5598035:-1
position: 5598035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5596437-5596644:-1:exon

position:5596437:-1
position: 5596437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5596644:-1
position: 5596644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5593342-5593548:-1:exon

position:5593342:-1
position: 5593342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5593548:-1
position: 5593548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5591482-5591652:-1:exon

position:5591482:-1
position: 5591482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5591652:-1
position: 5591652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5590906-5591056:-1:exon

position:5590906:-1
position: 5590906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5591056:-1
position: 5591056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5589144-5589358:-1:exon

position:5589144:-1
position: 5589144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5589358:-1
position: 5589358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5587341-5587458:-1:exon

position:5587341:-1
position: 5587341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5587458:-1
position: 5587458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5586115-5586400:-1:exon

position:5586115:-1
position: 5586115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5586400:-1
position: 5586400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5584763-5584892:-1:exon

position:5584763:-1
position: 5584763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5584892:-1
position: 5584892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5583019-5583117:-1:exon