Catharus ustulatus isolate bCatUst1 chromosome 40, bCatUst1.pri.v2, whole genome shotgun sequence.
type: Entry
definition: Catharus ustulatus isolate bCatUst1 chromosome 40, bCatUst1.pri.v2, whole genome shotgun sequence.
sequence version: NC_046260.1
sequence date: 2021-07-28
sequence: sequence
division: CON
label: NC_046260.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA613294
dblink: SAMN12618602
keyword: WGS
keyword: RefSeq
source: Catharus ustulatus (Swainson's thrush)
organism: Catharus ustulatus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Turdidae; Catharus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020375.1.\nAssembly name: bCatUst1.pri.v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/12/22. The original whole-genome shotgun project has the\naccession WNMQ00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 06-AUG-2020\nAssembly Method :: FALCON v. DX 1.9.0; FALCON-Unzip v.\n 6.0.0.47841; purge_dups github v.\n purge_haplotig (bitbucket v1.0.3+\n 1.Nov.2018); Scaff10x v. 2; Bionano Solve\n v. 3.2.1_04122018; Salsa2 HiC v. 2.2;\n Arrow polishing and gap filling v.\n Smrtlink_6.0.0.47841; Longranger Align v.\n 2.2.2; freebayes v. 1.3.1; gEVAL manual\n curation v. 2020-08-06; VGP assembly\n pipeline v. 1.5\nAssembly Name :: bCatUst1.pri.v2\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 60.58x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Catharus ustulatus Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 904802
topology: linear
so has quality: SO_0000987
location: 1..904802
location: region:1-904802:1
RO_0002162: 91951

NC_046260
type: RefSeq
SIO_000068: refseq

PRJNA613294
type: BioProject
SIO_000068: bioproject

SAMN12618602
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:904802:1
position: 904802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-904802:1:source
so part of: sequence
organism: Catharus ustulatus
mol type: genomic DNA
isolate: bCatUst1
chromosome: 40
sex: female
tissue type: blood
dev stage: adult
country: Canada: Kamloops
lat lon: 50.67613 N 120.33787 W
collection date: 15-Jul-2018
collected by: Kira Delmore

91951
type: Taxonomy
SIO_000068: taxonomy

LOC117010263
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010263
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3534..4263
location: region:3534-4263:1
so has part: feature:3534-4263:1:exon
subclass of: SO_0000011

117010263
type: Gene
SIO_000068: ncbigene

position:3534:1
position: 3534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4263:1
position: 4263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3534-4263:1:exon

LOC117010263
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117010263
product: uncharacterized LOC117010263, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004420598.1
SIO_010081: LOC117010263
subclass of: SO_0000673
so part of: LOC117010263
location: join(3534..3939,4017..4121,4187..4263)
location: region:3534-4263:1
so has part: feature:3534-3939:1:exon
so has part: feature:4017-4121:1:exon
so has part: feature:4187-4263:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3534-3939:1:exon

position:3939:1
position: 3939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4017-4121:1:exon

position:4017:1
position: 4017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4121:1
position: 4121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4187-4263:1:exon

position:4187:1
position: 4187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117010263
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117010263
product: uncharacterized LOC117010263, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_006163145.1
SIO_010081: LOC117010263
subclass of: SO_0000673
so part of: LOC117010263
location: join(3534..3939,4017..4128,4187..4204)
location: region:3534-4204:1
so has part: feature:3534-3939:1:exon
so has part: feature:4017-4128:1:exon
so has part: feature:4187-4204:1:exon

position:4204:1
position: 4204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3534-3939:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4017-4128:1:exon

position:4128:1
position: 4128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4187-4204:1:exon

ALDOA
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: ALDOA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4171..29510)
location: region:4171-29510:-1
so has part: feature:4171-29510:-1:exon
subclass of: SO_0000010

117010262
type: Gene
SIO_000068: ncbigene

position:4171:-1
position: 4171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29510:-1
position: 29510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4171-29510:-1:exon

ALDOA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ALDOA
product: aldolase, fructose-bisphosphate A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084557.1
SIO_010081: ALDOA
subclass of: SO_0000673
so part of: ALDOA
location: complement(join(4171..4308,4872..5071,12986..13160,14167..14250,17682..17842,21050..21104,22908..23119,25048..25169,29449..29510))
location: region:4171-29510:-1
so has part: feature:29449-29510:-1:exon
so has part: feature:25048-25169:-1:exon
so has part: feature:22908-23119:-1:exon
so has part: feature:21050-21104:-1:exon
so has part: feature:17682-17842:-1:exon
so has part: feature:14167-14250:-1:exon
so has part: feature:12986-13160:-1:exon
so has part: feature:4872-5071:-1:exon
so has part: feature:4171-4308:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29449-29510:-1:exon

position:29449:-1
position: 29449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:25048-25169:-1:exon

position:25048:-1
position: 25048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25169:-1
position: 25169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:22908-23119:-1:exon

position:22908:-1
position: 22908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23119:-1
position: 23119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:21050-21104:-1:exon

position:21050:-1
position: 21050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21104:-1
position: 21104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:17682-17842:-1:exon

position:17682:-1
position: 17682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17842:-1
position: 17842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:14167-14250:-1:exon

position:14167:-1
position: 14167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14250:-1
position: 14250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:12986-13160:-1:exon

position:12986:-1
position: 12986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13160:-1
position: 13160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4872-5071:-1:exon

position:4872:-1
position: 4872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5071:-1
position: 5071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4171-4308:-1:exon

position:4308:-1
position: 4308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ALDOA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ALDOA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fructose-bisphosphate aldolase A
translation: MSPPVPALTPEQKKELAAIAQRIVAPGKGILAADESTGSIAKRLSSVGAENTEENRRWYRQLLFTADKRVEPCIGGVILFHETMYQKADDGRPFPQVIRDKGALVGIKVDKGVVPLAGTNGETTTQGLDGLMERCAQYKKDGADFAKWRCVLKITAHTPTPLAVMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKTCQYVTEKVLAAVYKALSDHHVYLEGTLLKPNMVTAGHACATKYSPEEIAMATVTALRRTVPPAVPGITFLSGGQSEEEASLNLNAINRCPLPRPWALTFSYGRALQASALKAWAGKKDNTKAAQEEFVKRALANSLACQGKYTPSGTAGAAASESLFVSNHAY
SIO_010081: ALDOA
subclass of: SO_0000673
so part of: ALDOA
location: complement(join(4213..4308,4872..5071,12986..13160,14167..14250,17682..17842,21050..21104,22908..23119,25048..25159))
location: region:4213-25159:-1
so has part: feature:25048-25159:-1:exon
so has part: feature:22908-23119:-1:exon
so has part: feature:21050-21104:-1:exon
so has part: feature:17682-17842:-1:exon
so has part: feature:14167-14250:-1:exon
so has part: feature:12986-13160:-1:exon
so has part: feature:4872-5071:-1:exon
so has part: feature:4213-4308:-1:exon

XP_032940448.1
type: Protein
SIO_000068: ncbiprotein

position:4213:-1
position: 4213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25159:-1
position: 25159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25048-25159:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22908-23119:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:21050-21104:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17682-17842:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14167-14250:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12986-13160:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4872-5071:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4213-4308:-1:exon

TLCD3B
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: TLCD3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 38078..46363
location: region:38078-46363:1
so has part: feature:38078-46363:1:exon
subclass of: SO_0000010

117010267
type: Gene
SIO_000068: ncbigene

position:38078:1
position: 38078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46363:1
position: 46363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38078-46363:1:exon

TLCD3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: TLCD3B
product: TLC domain containing 3B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_033084559.2
SIO_010081: TLCD3B
subclass of: SO_0000673
so part of: TLCD3B
location: join(38078..38251,40009..40092,41885..42083,43451..43546,45761..46363)
location: region:38078-46363:1
so has part: feature:38078-38251:1:exon
so has part: feature:40009-40092:1:exon
so has part: feature:41885-42083:1:exon
so has part: feature:43451-43546:1:exon
so has part: feature:45761-46363:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:38078-38251:1:exon

position:38251:1
position: 38251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:40009-40092:1:exon

position:40009:1
position: 40009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40092:1
position: 40092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:41885-42083:1:exon

position:41885:1
position: 41885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42083:1
position: 42083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:43451-43546:1:exon

position:43451:1
position: 43451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43546:1
position: 43546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:45761-46363:1:exon

position:45761:1
position: 45761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TLCD3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: TLCD3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceramide synthase
translation: MASTAGYIISSSCQHVIDDQHWLAAAYPPFAVPYFVYDVYAMYLCHLQRAQVKGHGPGGARAFLRHERLMVLHHGAMVLVCFPVATVWRQGKGDFFLGCLLMAELSTPLVCLGKVLILLHLQHTTLHKLNAVALLLTFLLCRVLLFPYLYWAYGRHRGLALLRVPSALPVAYNMAAVAMAAPQLYWFGLICRGAWRLFRPAGSPPRPP
SIO_010081: TLCD3B
subclass of: SO_0000673
so part of: TLCD3B
location: join(40034..40092,41885..42083,43451..43546,45761..46033)
location: region:40034-46033:1
so has part: feature:40034-40092:1:exon
so has part: feature:41885-42083:1:exon
so has part: feature:43451-43546:1:exon
so has part: feature:45761-46033:1:exon

XP_032940450.1
type: Protein
SIO_000068: ncbiprotein

position:40034:1
position: 40034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46033:1
position: 46033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40034-40092:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:41885-42083:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:43451-43546:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45761-46033:1:exon

LOC122149477
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC122149477
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 46455..49064
location: region:46455-49064:1
so has part: feature:46455-49064:1:exon

122149477
type: Gene
SIO_000068: ncbigene

position:46455:1
position: 46455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49064:1
position: 49064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46455-49064:1:exon

LOC122149477
type: Exon
subclass of: SO_0000147
RO_0002162: 91951
gene: LOC122149477
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 80% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC122149477
subclass of: SO_0000673
so part of: LOC122149477
location: 46455..46568
location: region:46455-46568:1
so has part: feature:46455-46568:1:exon

position:46568:1
position: 46568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46455-46568:1:exon

LOC122149477
type: Exon
subclass of: SO_0000147
RO_0002162: 91951
gene: LOC122149477
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 80% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC122149477
subclass of: SO_0000673
so part of: LOC122149477
location: 47628..47819
location: region:47628-47819:1
so has part: feature:47628-47819:1:exon

position:47628:1
position: 47628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47819:1
position: 47819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47628-47819:1:exon

LOC122149477
type: Exon
subclass of: SO_0000147
RO_0002162: 91951
gene: LOC122149477
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 80% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC122149477
subclass of: SO_0000673
so part of: LOC122149477
location: 48663..49064
location: region:48663-49064:1
so has part: feature:48663-49064:1:exon

position:48663:1
position: 48663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48663-49064:1:exon

LOC117010260
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010260
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 55625..79677
location: region:55625-79677:1
so has part: feature:55625-79677:1:exon
subclass of: SO_0000010

117010260
type: Gene
SIO_000068: ncbigene

position:55625:1
position: 55625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79677:1
position: 79677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55625-79677:1:exon

LOC117010260
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010260
product: alpha-1B-glycoprotein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084553.2
SIO_010081: LOC117010260
subclass of: SO_0000673
so part of: LOC117010260
location: join(55625..55904,58521..58559,59950..60255,64512..64811,69077..69386,71238..71377,77227..77328,79263..79677)
location: region:55625-79677:1
so has part: feature:55625-55904:1:exon
so has part: feature:58521-58559:1:exon
so has part: feature:59950-60255:1:exon
so has part: feature:64512-64811:1:exon
so has part: feature:69077-69386:1:exon
so has part: feature:71238-71377:1:exon
so has part: feature:77227-77328:1:exon
so has part: feature:79263-79677:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55625-55904:1:exon

position:55904:1
position: 55904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:58521-58559:1:exon

position:58521:1
position: 58521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58559:1
position: 58559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:59950-60255:1:exon

position:59950:1
position: 59950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60255:1
position: 60255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:64512-64811:1:exon

position:64512:1
position: 64512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64811:1
position: 64811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:69077-69386:1:exon

position:69077:1
position: 69077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69386:1
position: 69386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:71238-71377:1:exon

position:71238:1
position: 71238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71377:1
position: 71377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:77227-77328:1:exon

position:77227:1
position: 77227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77328:1
position: 77328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:79263-79677:1:exon

position:79263:1
position: 79263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117010260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010260
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1B-glycoprotein-like
translation: MSQEPPLSHLRAVTSPLRNFCGKFGAASPFPDTFGVTWREGTGGDRRGQEGTGTGTGTGTGTGGDTAMALPTFIPTLASLPLLFPLAMLSVLPPPAPDISVSPAKPRFLVGDTVSIACAVPGGAGPYRIAGFRFSHESRVTDATASKPRFALTFNVTGPRDGGHYSCAYRVRQRGGDVTESARSGDVLIDVQDRPPQPNLTVAPSALTVEGQPLVFLCSAPPGAAERRFRFFQDGLEVGGGLLEGSGSAGARLRVERSERNGTGNFSCGYEERAEGRWIASYASDAVAVEVEAPCPAPALWVEPPSGVVASGHRIRLGCAAAPRRFRRRFRFYRDGDVINGDDVIGDVIGNGSELLIREVFQNFSGNFSCRVLEEVGGAWVEAPPSGGVAVVVRGSAGPRPQLWVDAADTAGAGAGRFSCGYEEELEGGWAASPISAGVDVPAQLNLLPLVVGGVVGVASLILALLLAAWLCRRRRGGSRWRGLSPGDDTGTLSMGELEVAT
SIO_010081: LOC117010260
subclass of: SO_0000673
so part of: LOC117010260
location: join(55673..55904,58521..58559,59950..60255,64512..64811,69077..69386,71238..71377,77227..77328,79263..79342)
location: region:55673-79342:1
so has part: feature:55673-55904:1:exon
so has part: feature:58521-58559:1:exon
so has part: feature:59950-60255:1:exon
so has part: feature:64512-64811:1:exon
so has part: feature:69077-69386:1:exon
so has part: feature:71238-71377:1:exon
so has part: feature:77227-77328:1:exon
so has part: feature:79263-79342:1:exon

XP_032940444.1
type: Protein
SIO_000068: ncbiprotein

position:55673:1
position: 55673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79342:1
position: 79342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55673-55904:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:58521-58559:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59950-60255:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:64512-64811:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:69077-69386:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:71238-71377:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:77227-77328:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:79263-79342:1:exon

LOC117010215
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010215
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(62267..64415)
location: region:62267-64415:-1
so has part: feature:62267-64415:-1:exon
subclass of: SO_0000010

117010215
type: Gene
SIO_000068: ncbigene

position:62267:-1
position: 62267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64415:-1
position: 64415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62267-64415:-1:exon

LOC117010215
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010215
product: uncharacterized LOC117010215
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084510.1
SIO_010081: LOC117010215
subclass of: SO_0000673
so part of: LOC117010215
location: complement(join(62267..62808,63137..63347,63527..63844,64198..64239,64323..64415))
location: region:62267-64415:-1
so has part: feature:64323-64415:-1:exon
so has part: feature:64198-64239:-1:exon
so has part: feature:63527-63844:-1:exon
so has part: feature:63137-63347:-1:exon
so has part: feature:62267-62808:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64323-64415:-1:exon

position:64323:-1
position: 64323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:64198-64239:-1:exon

position:64198:-1
position: 64198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64239:-1
position: 64239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:63527-63844:-1:exon

position:63527:-1
position: 63527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63844:-1
position: 63844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:63137-63347:-1:exon

position:63137:-1
position: 63137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63347:-1
position: 63347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:62267-62808:-1:exon

position:62808:-1
position: 62808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117010215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010215
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117010215
translation: MDFGIETSKWLEKSRLVGRVKVGWKSQGWVKSQGWVEESRLGGRVKVGWKSQDWVEESRLGEESRLGEESRLDGRVKVGWKSQDWVEESRLGLNGDGFWDRNSKLDGRVRVGWKNQGWVEESRLGEESRLGEESRLGGRVKVGWKSQGWVSMAMDIGIETPNWMEESRLGGRVKVGWKSQGWVEESRLVGRVKVGWKSQGWVKSQGWVKSQGWVEESRLGEESRLGGRVKVGWKSQGWVEESRLDGRVEVGWKSQGWVSTAMDFRIETPNWMEESGLVGRVKVGWKSQGWVEESRLVGRVKVGWKSQGWLEESRLGGRVKAGSQRRWILG
SIO_010081: LOC117010215
subclass of: SO_0000673
so part of: LOC117010215
location: complement(join(62469..62808,63137..63347,63527..63844,64198..64239,64323..64404))
location: region:62469-64404:-1
so has part: feature:64323-64404:-1:exon
so has part: feature:64198-64239:-1:exon
so has part: feature:63527-63844:-1:exon
so has part: feature:63137-63347:-1:exon
so has part: feature:62469-62808:-1:exon

XP_032940401.1
type: Protein
SIO_000068: ncbiprotein

position:62469:-1
position: 62469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64404:-1
position: 64404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64323-64404:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:64198-64239:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:63527-63844:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:63137-63347:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:62469-62808:-1:exon

LOC117010223
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010223
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 84323..105427
location: region:84323-105427:1
so has part: feature:84323-105427:1:exon
subclass of: SO_0000010

117010223
type: Gene
SIO_000068: ncbigene

position:84323:1
position: 84323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105427:1
position: 105427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84323-105427:1:exon

LOC117010223
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010223
product: sodium/glucose cotransporter 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084515.1
SIO_010081: LOC117010223
subclass of: SO_0000673
so part of: LOC117010223
location: join(84323..84403,88717..88788,88890..88994,89724..89783,90857..90961,93034..93139,93891..93971,94926..95125,95778..95913,96825..96932,98836..98986,100170..100338,102672..102887,104355..104454,105195..105427)
location: region:84323-105427:1
so has part: feature:84323-84403:1:exon
so has part: feature:88717-88788:1:exon
so has part: feature:88890-88994:1:exon
so has part: feature:89724-89783:1:exon
so has part: feature:90857-90961:1:exon
so has part: feature:93034-93139:1:exon
so has part: feature:93891-93971:1:exon
so has part: feature:94926-95125:1:exon
so has part: feature:95778-95913:1:exon
so has part: feature:96825-96932:1:exon
so has part: feature:98836-98986:1:exon
so has part: feature:100170-100338:1:exon
so has part: feature:102672-102887:1:exon
so has part: feature:104355-104454:1:exon
so has part: feature:105195-105427:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:84323-84403:1:exon

position:84403:1
position: 84403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:88717-88788:1:exon

position:88717:1
position: 88717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88788:1
position: 88788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:88890-88994:1:exon

position:88890:1
position: 88890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88994:1
position: 88994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:89724-89783:1:exon

position:89724:1
position: 89724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89783:1
position: 89783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:90857-90961:1:exon

position:90857:1
position: 90857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90961:1
position: 90961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:93034-93139:1:exon

position:93034:1
position: 93034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93139:1
position: 93139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:93891-93971:1:exon

position:93891:1
position: 93891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93971:1
position: 93971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:94926-95125:1:exon

position:94926:1
position: 94926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95125:1
position: 95125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:95778-95913:1:exon

position:95778:1
position: 95778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95913:1
position: 95913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:96825-96932:1:exon

position:96825:1
position: 96825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96932:1
position: 96932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:98836-98986:1:exon

position:98836:1
position: 98836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98986:1
position: 98986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:100170-100338:1:exon

position:100170:1
position: 100170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100338:1
position: 100338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:102672-102887:1:exon

position:102672:1
position: 102672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102887:1
position: 102887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:104355-104454:1:exon

position:104355:1
position: 104355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104454:1
position: 104454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:105195-105427:1:exon

position:105195:1
position: 105195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117010223
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010223
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/glucose cotransporter 2-like
translation: MEAPGADPWDLGVIGGYFGLVMAVGLWSLRRRSGRSLSGYFLAGRSMSWAPVGASLFASNIGSGHFVGLAGTGAAGGIAVGGFEWSGMFIVLLLGWVFVPIYMRAGVSTMPEYLGRRFGGGRIRLYLALLSLGLYISTKISVDMYSGALFIREALGWDLYASVGALLGITALYTVTGGLTALMFADLVQTLIIIAGASVLAVYAMGAVGGYQGLQERYPLATPPNISGPCGRPRADAFHLLRDPQSGDLPWPGLVLGLGIISAWYWCTDQVIVQRCLAGRSLTHVRAGCVLCGYLKVLPMFLMVLPGMAARVLFPEVVGCADPQGCSRACGSALGCSNVAYPRLVLGLLPHGLRGLMLAVVLAALMSSLASIFASSGALFTFDVYRKLRPRAGPKHLLLAGRLWVLAMVGLSLAWLPVVEAARGGQLFDYMQALSSYLAPPLAAVFFLAVFVPRVNEPGAFWGLLGGLGLGLARLIPEIFLGSGSCGAPGRCPALLCGMHYLHFAVLLFLLTCAIVLGVSWCHPPIPKVHLHRLVFSLRNSREPRIDLDAAKEPPQNLGVPMGDVEATPGAEPGAGGVASDTPGVGVASDTSGVGVAPPPEDRKWSRLVNANALVLMGVASFLWGYFA
SIO_010081: LOC117010223
subclass of: SO_0000673
so part of: LOC117010223
location: join(84323..84403,88717..88788,88890..88994,89724..89783,90857..90961,93034..93139,93891..93971,94926..95125,95778..95913,96825..96932,98836..98986,100170..100338,102672..102887,104355..104454,105195..105391)
location: region:84323-105391:1
so has part: feature:84323-84403:1:exon
so has part: feature:88717-88788:1:exon
so has part: feature:88890-88994:1:exon
so has part: feature:89724-89783:1:exon
so has part: feature:90857-90961:1:exon
so has part: feature:93034-93139:1:exon
so has part: feature:93891-93971:1:exon
so has part: feature:94926-95125:1:exon
so has part: feature:95778-95913:1:exon
so has part: feature:96825-96932:1:exon
so has part: feature:98836-98986:1:exon
so has part: feature:100170-100338:1:exon
so has part: feature:102672-102887:1:exon
so has part: feature:104355-104454:1:exon
so has part: feature:105195-105391:1:exon

XP_032940406.1
type: Protein
SIO_000068: ncbiprotein

position:105391:1
position: 105391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84323-84403:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:88717-88788:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88890-88994:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89724-89783:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:90857-90961:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:93034-93139:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93891-93971:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:94926-95125:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:95778-95913:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:96825-96932:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:98836-98986:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:100170-100338:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:102672-102887:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:104355-104454:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:105195-105391:1:exon

RUSF1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: RUSF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(107065..123859)
location: region:107065-123859:-1
so has part: feature:107065-123859:-1:exon
subclass of: SO_0000010

117010249
type: Gene
SIO_000068: ncbigene

position:107065:-1
position: 107065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123859:-1
position: 123859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107065-123859:-1:exon

RUSF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: RUSF1
product: RUS family member 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084542.1
SIO_010081: RUSF1
subclass of: SO_0000673
so part of: RUSF1
location: complement(join(107065..107194,108034..108111,110391..110552,112167..112237,113549..113606,114003..114241,114945..115015,115865..115966,116524..116629,116832..116864,117476..117521,118990..119104,120104..120181,121606..121697,123783..123859))
location: region:107065-123859:-1
so has part: feature:123783-123859:-1:exon
so has part: feature:121606-121697:-1:exon
so has part: feature:120104-120181:-1:exon
so has part: feature:118990-119104:-1:exon
so has part: feature:117476-117521:-1:exon
so has part: feature:116832-116864:-1:exon
so has part: feature:116524-116629:-1:exon
so has part: feature:115865-115966:-1:exon
so has part: feature:114945-115015:-1:exon
so has part: feature:114003-114241:-1:exon
so has part: feature:113549-113606:-1:exon
so has part: feature:112167-112237:-1:exon
so has part: feature:110391-110552:-1:exon
so has part: feature:108034-108111:-1:exon
so has part: feature:107065-107194:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:123783-123859:-1:exon

position:123783:-1
position: 123783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:121606-121697:-1:exon

position:121606:-1
position: 121606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121697:-1
position: 121697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:120104-120181:-1:exon

position:120104:-1
position: 120104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120181:-1
position: 120181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:118990-119104:-1:exon

position:118990:-1
position: 118990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119104:-1
position: 119104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:117476-117521:-1:exon

position:117476:-1
position: 117476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117521:-1
position: 117521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:116832-116864:-1:exon

position:116832:-1
position: 116832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116864:-1
position: 116864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:116524-116629:-1:exon

position:116524:-1
position: 116524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116629:-1
position: 116629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:115865-115966:-1:exon

position:115865:-1
position: 115865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115966:-1
position: 115966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:114945-115015:-1:exon

position:114945:-1
position: 114945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115015:-1
position: 115015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:114003-114241:-1:exon

position:114003:-1
position: 114003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114241:-1
position: 114241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:113549-113606:-1:exon

position:113549:-1
position: 113549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113606:-1
position: 113606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:112167-112237:-1:exon

position:112167:-1
position: 112167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112237:-1
position: 112237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:110391-110552:-1:exon

position:110391:-1
position: 110391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110552:-1
position: 110552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:108034-108111:-1:exon

position:108034:-1
position: 108034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108111:-1
position: 108111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:107065-107194:-1:exon

position:107194:-1
position: 107194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RUSF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: RUSF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RUS family member 1
translation: MERPEAPALCRCFWGSLEAAPAGKESVREKLRRAAARILLPQGYPESVSPDYARYQCWDGLQALCSTMAASLSTRSVLEAVGVGDGAATVTGATLTWLLRDGVGIITRILFVWLQGSHLDCEAKQWRFVADLLNDVALVLEILAPYWLSLSPALLVMAAVARCVVGVAGGATRAALAVHQARRDNVADVAAKDGSQETLVNGAGLLLSLLLLPLLDGRPWLTWAVLLLLLAAHLGSNLAALGSLTLPGLNRPRLRLAIGWALRGGGANGERGVAWSGKGGVRLELPRPQQVNPREPLLPGFGSRLRLHLGAPLEHLVSSEAELQKALECGNPDFLVVLRPSRGWVGVGLRRGAPPEAPILGCAQALLLEELLGEDLGTGTPLGRLLGPLQRRLKSCPPGAVPWGVLAETSRLFRDLGPALLQGLEAAGWDTQRPLLAVDEWRLEWAEPGKKIENCSKK
SIO_010081: RUSF1
subclass of: SO_0000673
so part of: RUSF1
location: complement(join(107085..107194,108034..108111,110391..110552,112167..112237,113549..113606,114003..114241,114945..115015,115865..115966,116524..116629,116832..116864,117476..117521,118990..119104,120104..120181,121606..121697,123783..123798))
location: region:107085-123798:-1
so has part: feature:123783-123798:-1:exon
so has part: feature:121606-121697:-1:exon
so has part: feature:120104-120181:-1:exon
so has part: feature:118990-119104:-1:exon
so has part: feature:117476-117521:-1:exon
so has part: feature:116832-116864:-1:exon
so has part: feature:116524-116629:-1:exon
so has part: feature:115865-115966:-1:exon
so has part: feature:114945-115015:-1:exon
so has part: feature:114003-114241:-1:exon
so has part: feature:113549-113606:-1:exon
so has part: feature:112167-112237:-1:exon
so has part: feature:110391-110552:-1:exon
so has part: feature:108034-108111:-1:exon
so has part: feature:107085-107194:-1:exon

XP_032940433.1
type: Protein
SIO_000068: ncbiprotein

position:107085:-1
position: 107085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123798:-1
position: 123798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123783-123798:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:121606-121697:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:120104-120181:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:118990-119104:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:117476-117521:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:116832-116864:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:116524-116629:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:115865-115966:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:114945-115015:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:114003-114241:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:113549-113606:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:112167-112237:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:110391-110552:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:108034-108111:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:107085-107194:-1:exon

RNF40
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: RNF40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(125523..179930)
location: region:125523-179930:-1
so has part: feature:125523-179930:-1:exon
subclass of: SO_0000010

117010224
type: Gene
SIO_000068: ncbigene

position:125523:-1
position: 125523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179930:-1
position: 179930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125523-179930:-1:exon

RNF40
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: RNF40
product: ring finger protein 40
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 13 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084516.1
SIO_010081: RNF40
subclass of: SO_0000673
so part of: RNF40
location: complement(join(125523..126594,130256..130357,132413..132553,134692..134817,137026..137238,140620..140769,142299..142416,143797..143939,144198..144254,145478..145599,146180..146315,149752..149931,154171..154290,156295..156369,159353..159499,160351..160463,166222..166371,168546..168705,172095..172262,177910..178046,179880..179930))
location: region:125523-179930:-1
so has part: feature:179880-179930:-1:exon
so has part: feature:177910-178046:-1:exon
so has part: feature:172095-172262:-1:exon
so has part: feature:168546-168705:-1:exon
so has part: feature:166222-166371:-1:exon
so has part: feature:160351-160463:-1:exon
so has part: feature:159353-159499:-1:exon
so has part: feature:156295-156369:-1:exon
so has part: feature:154171-154290:-1:exon
so has part: feature:149752-149931:-1:exon
so has part: feature:146180-146315:-1:exon
so has part: feature:145478-145599:-1:exon
so has part: feature:144198-144254:-1:exon
so has part: feature:143797-143939:-1:exon
so has part: feature:142299-142416:-1:exon
so has part: feature:140620-140769:-1:exon
so has part: feature:137026-137238:-1:exon
so has part: feature:134692-134817:-1:exon
so has part: feature:132413-132553:-1:exon
so has part: feature:130256-130357:-1:exon
so has part: feature:125523-126594:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:179880-179930:-1:exon

position:179880:-1
position: 179880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:177910-178046:-1:exon

position:177910:-1
position: 177910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178046:-1
position: 178046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:172095-172262:-1:exon

position:172095:-1
position: 172095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172262:-1
position: 172262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:168546-168705:-1:exon

position:168546:-1
position: 168546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168705:-1
position: 168705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:166222-166371:-1:exon

position:166222:-1
position: 166222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166371:-1
position: 166371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:160351-160463:-1:exon

position:160351:-1
position: 160351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160463:-1
position: 160463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:159353-159499:-1:exon

position:159353:-1
position: 159353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159499:-1
position: 159499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:156295-156369:-1:exon

position:156295:-1
position: 156295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156369:-1
position: 156369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:154171-154290:-1:exon

position:154171:-1
position: 154171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154290:-1
position: 154290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:149752-149931:-1:exon

position:149752:-1
position: 149752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149931:-1
position: 149931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:146180-146315:-1:exon

position:146180:-1
position: 146180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146315:-1
position: 146315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:145478-145599:-1:exon

position:145478:-1
position: 145478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145599:-1
position: 145599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:144198-144254:-1:exon

position:144198:-1
position: 144198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144254:-1
position: 144254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:143797-143939:-1:exon

position:143797:-1
position: 143797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143939:-1
position: 143939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:142299-142416:-1:exon

position:142299:-1
position: 142299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142416:-1
position: 142416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:140620-140769:-1:exon

position:140620:-1
position: 140620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140769:-1
position: 140769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:137026-137238:-1:exon

position:137026:-1
position: 137026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137238:-1
position: 137238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:134692-134817:-1:exon

position:134692:-1
position: 134692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134817:-1
position: 134817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:132413-132553:-1:exon

position:132413:-1
position: 132413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132553:-1
position: 132553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:130256-130357:-1:exon

position:130256:-1
position: 130256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130357:-1
position: 130357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:125523-126594:-1:exon

position:126594:-1
position: 126594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNF40
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: RNF40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase BRE1B
translation: MAGVGAKRGPPEAGGGPPEKRPPREEQPPTTLIEPLRLGGISSTEEMDVKVLQFRNKKLAERLEQRQVCEDELRERIEKLEKRQATDDATLHLVNRFWAQLDSEVQALLRRCDGDGAGGGAGGGGGAAPPPPGDPPGDPPEPPLNPPGDGDRREPWGGPEEGVAAAPPPPRLSFAPEAVARLGGALGRVQRGIHQVGAHLSNTAELSEAGRELLRERLREHRRLQELTQNLHEKHQREALELAELQDKAISAETKVLEMGTTLEGLQWDSAKLRKREGRLDRHLAEALEQLTSGSYGSGSSGGFQGGQITLSMQKFEMLNAELEGNQELANSRMAELEKLQLELQAAVRGQERLKVALRSLPEEAVKEALEYKVLQSQFSLLYHESLQVKTQLDEARALLLATKNSHLRHIEHMESDELGVQKRLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPINREMRHLISSLQNHNHQLKGDVQRYKRKLREVQAEIGKLRLQASGAPPPPSPAPPPPEPPPAPPPPRPRPPGGRGEGRERPKGAGPEEGKKKDSEVLKQLRAELKKAQENQKEMKLLLDMYKSAPKEQRDKVTLMAAERKSKAELEELRVRWRELEERERRESKKLADEEALRRLRMSEEQIEHLQRRLAATKQEEEALLSEMDVTGQAFEDMQEQNLRLLQQLREKDDANFKLMSERIKANQIHKLLREEKDELAEQVLALKAQVEAQLQVVQKLEEKERGLQSALGAVEKELSLRTQALELHKRKAVEAAQLAEDLRAQGEHVQARLRELQVCAAENRAAKDKESLSLKRAQEELSRLRRKLEKQRKVEVYADADQILQEEIKEYRARLTCPCCNARKKDAVLTKCFHVFCFECVKSRYDTRQRKCPKCNAAFGAHDFHRVYIS
SIO_010081: RNF40
subclass of: SO_0000673
so part of: RNF40
location: complement(join(126418..126594,130256..130357,132413..132553,134692..134817,137026..137238,140620..140769,142299..142416,143797..143939,144198..144254,145478..145599,146180..146315,149752..149931,154171..154290,156295..156369,159353..159499,160351..160463,166222..166371,168546..168705,172095..172262,177910..178041))
location: region:126418-178041:-1
so has part: feature:177910-178041:-1:exon
so has part: feature:172095-172262:-1:exon
so has part: feature:168546-168705:-1:exon
so has part: feature:166222-166371:-1:exon
so has part: feature:160351-160463:-1:exon
so has part: feature:159353-159499:-1:exon
so has part: feature:156295-156369:-1:exon
so has part: feature:154171-154290:-1:exon
so has part: feature:149752-149931:-1:exon
so has part: feature:146180-146315:-1:exon
so has part: feature:145478-145599:-1:exon
so has part: feature:144198-144254:-1:exon
so has part: feature:143797-143939:-1:exon
so has part: feature:142299-142416:-1:exon
so has part: feature:140620-140769:-1:exon
so has part: feature:137026-137238:-1:exon
so has part: feature:134692-134817:-1:exon
so has part: feature:132413-132553:-1:exon
so has part: feature:130256-130357:-1:exon
so has part: feature:126418-126594:-1:exon

XP_032940407.1
type: Protein
SIO_000068: ncbiprotein

position:126418:-1
position: 126418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178041:-1
position: 178041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177910-178041:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:172095-172262:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:168546-168705:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:166222-166371:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:160351-160463:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:159353-159499:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:156295-156369:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:154171-154290:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:149752-149931:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:146180-146315:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:145478-145599:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:144198-144254:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:143797-143939:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:142299-142416:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:140620-140769:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:137026-137238:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:134692-134817:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:132413-132553:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:130256-130357:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:126418-126594:-1:exon

LOC117010222
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010222
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(184602..185246)
location: region:184602-185246:-1
so has part: feature:184602-185246:-1:exon
subclass of: SO_0000011

117010222
type: Gene
SIO_000068: ncbigene

position:184602:-1
position: 184602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185246:-1
position: 185246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184602-185246:-1:exon

LOC117010222
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117010222
product: uncharacterized LOC117010222
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_004420593.1
SIO_010081: LOC117010222
subclass of: SO_0000673
so part of: LOC117010222
location: complement(join(184602..184771,184969..185246))
location: region:184602-185246:-1
so has part: feature:184969-185246:-1:exon
so has part: feature:184602-184771:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:184969-185246:-1:exon

position:184969:-1
position: 184969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:184602-184771:-1:exon

position:184771:-1
position: 184771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117010225
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010225
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(185344..260144)
location: region:185344-260144:-1
so has part: feature:185344-260144:-1:exon
subclass of: SO_0000010

117010225
type: Gene
SIO_000068: ncbigene

position:185344:-1
position: 185344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260144:-1
position: 260144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185344-260144:-1:exon

LOC117010225
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010225
product: Snf2 related CREBBP activator protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084517.1
SIO_010081: LOC117010225
subclass of: SO_0000673
so part of: LOC117010225
location: complement(join(185344..186241,186371..187026,190597..190680,192595..192768,195557..195814,198213..198327,200085..200281,202319..202488,204218..204420,208388..208531,209577..209797,212343..212375,216016..216191,219615..219758,222822..223004,224165..224472,226212..226381,228232..228418,229979..230115,231555..231747,237134..237303,237598..237734,240574..240751,243703..244001,244595..244690,247117..247206,249679..249754,250404..250462,251159..251306,255993..256133,257242..257427,260059..260144))
location: region:185344-260144:-1
so has part: feature:260059-260144:-1:exon
so has part: feature:257242-257427:-1:exon
so has part: feature:255993-256133:-1:exon
so has part: feature:251159-251306:-1:exon
so has part: feature:250404-250462:-1:exon
so has part: feature:249679-249754:-1:exon
so has part: feature:247117-247206:-1:exon
so has part: feature:244595-244690:-1:exon
so has part: feature:243703-244001:-1:exon
so has part: feature:240574-240751:-1:exon
so has part: feature:237598-237734:-1:exon
so has part: feature:237134-237303:-1:exon
so has part: feature:231555-231747:-1:exon
so has part: feature:229979-230115:-1:exon
so has part: feature:228232-228418:-1:exon
so has part: feature:226212-226381:-1:exon
so has part: feature:224165-224472:-1:exon
so has part: feature:222822-223004:-1:exon
so has part: feature:219615-219758:-1:exon
so has part: feature:216016-216191:-1:exon
so has part: feature:212343-212375:-1:exon
so has part: feature:209577-209797:-1:exon
so has part: feature:208388-208531:-1:exon
so has part: feature:204218-204420:-1:exon
so has part: feature:202319-202488:-1:exon
so has part: feature:200085-200281:-1:exon
so has part: feature:198213-198327:-1:exon
so has part: feature:195557-195814:-1:exon
so has part: feature:192595-192768:-1:exon
so has part: feature:190597-190680:-1:exon
so has part: feature:186371-187026:-1:exon
so has part: feature:185344-186241:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:260059-260144:-1:exon

position:260059:-1
position: 260059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:257242-257427:-1:exon

position:257242:-1
position: 257242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257427:-1
position: 257427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:255993-256133:-1:exon

position:255993:-1
position: 255993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256133:-1
position: 256133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:251159-251306:-1:exon

position:251159:-1
position: 251159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251306:-1
position: 251306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:250404-250462:-1:exon

position:250404:-1
position: 250404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250462:-1
position: 250462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:249679-249754:-1:exon

position:249679:-1
position: 249679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249754:-1
position: 249754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:247117-247206:-1:exon

position:247117:-1
position: 247117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247206:-1
position: 247206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:244595-244690:-1:exon

position:244595:-1
position: 244595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244690:-1
position: 244690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:243703-244001:-1:exon

position:243703:-1
position: 243703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244001:-1
position: 244001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:240574-240751:-1:exon

position:240574:-1
position: 240574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240751:-1
position: 240751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:237598-237734:-1:exon

position:237598:-1
position: 237598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237734:-1
position: 237734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:237134-237303:-1:exon

position:237134:-1
position: 237134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237303:-1
position: 237303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:231555-231747:-1:exon

position:231555:-1
position: 231555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231747:-1
position: 231747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:229979-230115:-1:exon

position:229979:-1
position: 229979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230115:-1
position: 230115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:228232-228418:-1:exon

position:228232:-1
position: 228232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228418:-1
position: 228418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:226212-226381:-1:exon

position:226212:-1
position: 226212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226381:-1
position: 226381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:224165-224472:-1:exon

position:224165:-1
position: 224165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224472:-1
position: 224472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:222822-223004:-1:exon

position:222822:-1
position: 222822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223004:-1
position: 223004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:219615-219758:-1:exon

position:219615:-1
position: 219615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219758:-1
position: 219758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:216016-216191:-1:exon

position:216016:-1
position: 216016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216191:-1
position: 216191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:212343-212375:-1:exon

position:212343:-1
position: 212343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212375:-1
position: 212375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:209577-209797:-1:exon

position:209577:-1
position: 209577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209797:-1
position: 209797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:208388-208531:-1:exon

position:208388:-1
position: 208388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208531:-1
position: 208531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:204218-204420:-1:exon

position:204218:-1
position: 204218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204420:-1
position: 204420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:202319-202488:-1:exon

position:202319:-1
position: 202319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202488:-1
position: 202488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:200085-200281:-1:exon

position:200085:-1
position: 200085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200281:-1
position: 200281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:198213-198327:-1:exon

position:198213:-1
position: 198213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198327:-1
position: 198327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:195557-195814:-1:exon

position:195557:-1
position: 195557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195814:-1
position: 195814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:192595-192768:-1:exon

position:192595:-1
position: 192595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192768:-1
position: 192768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:190597-190680:-1:exon

position:190597:-1
position: 190597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190680:-1
position: 190680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:186371-187026:-1:exon

position:186371:-1
position: 186371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187026:-1
position: 187026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:185344-186241:-1:exon

position:186241:-1
position: 186241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117010225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010225
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: helicase SRCAP
translation: MKREGFWSLRRLPKVPEPARPKVHWDYLCEEMQWLAADFAQERRWKRGVARKVVRMVMRHHEEQRQRQERAKREEQAKLRRVAAAIAREVRHFWSSVEKVVQFKQQSRLEEKRKKALDLQLDFIVGQTERYSDLLSRSLNAPRGLTCAASAEGPPRPLGELLGSLPPQVLRRDPAPPWGPREDDDEFTAEEEEGEDEEDTIAAQERLEGDIDHQQELDELAREGALPMEELLQRYRGAFTDSDCDSAPAASSTRSDSPGGDSEEEEDDDDDSDDDEDDDDDEADDEDEEEEGEGQEGGGGAPGEPGGGSAPPAAPAQVSPAPAAPAGPAPKKEISDIAAAAESLQPKGYTLATTQVKTPIPHLLRGTLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGSWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERRLKRQGWTKPNAFHVCITSYKLVLQDHQAFRRKNWKYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLMELWSLMHFLMPRVFQSHREFREWFHNPLTGMIEGSQEYNESLVKRLHKVLRPFLLRRLKVDVEKQMPKKYEHVLRCRLSKRQRFLYDDFMGQASTKATLASGHFMSVINVLMQLRKVCNHPDLFEPRPVTSPLVTPGLSLGTPALVLRALEPHPFQQVDLSPFELVSLESHLSRYAADWFLPRFRVSRRLVEDVAAAPDPPPRPKPVRMKVNRMLQPVPRAEPRAVLLLPAPRPAQGGVASPSPAPSAPNPAPSASGPAPLLVTPPLVGLGHAPGGGPAPLVAPGAGLNLGLGLALAPPRAPPTLLAPPPAGPAHALPAASLATPTPAGGHAPVATPTPSLGKGAGPGTAPPPPAVATFALPQRLLLAPDMQARLPWNVVHLLAAGGAPHLPGPLAQVTLLAPVGGGAATPTQNQPGLGLPLGTGPLPHPSPPPPCCGCCPSPTPSPPLPPPNPPRAPPPPNPTRAPPPPNPTRAEPEPRRKQPPPPPRSPFYLESLESRRARGRAERLERLLRLNELRCGLSPVYGTEVLAFLTLPHNQLQPQGGALDSAVLAPPQRLQQMKPILDSSPVYGTEVLAFLTLPHNQLHTQHRGGALDSAVLAPPQRLQQMKPILDRFLVAVPAVASRGVSLHSARPPPWAQRQRQRLEQQLREELRQRGGHLGGVLEGPRTHFPDPRLVQYDCGKLQALDVLLRRLRAGGHRVLIFTQMTRMLDVLERFLTFHGHIYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLAGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRLLGDMAIEGGNFTTAYFKQQTIRELFDMAPEEPPRERDGDGDRNNNDKNGDKNDKNDKNGDRNDRGDRNGDRGDRNGDKDGGDSADKDEDDEDPAATRRTHILEQALCGAEDPEDIRAASQAQAEHVAAMAEFSESLSPEDGGGAAEEELSKAEQEIAALVEQLTPIERYAMNFLEASLEDVSREELKQAEEQVEAARKDIDQAKGGGGRFRLPPPPRDGDEEEEEEEEPGAAAMTGGGAAAMTGGGAPGGEEEPQSDRGGGDRGDRGDRGARKPRRARGPPRPPHPERPGTRASQRLRAVTSPVTSSPPSATSSGAAQPVPAAPAPEVGAEPEKEVTSSPVLPAPVTSSPPQATPPPSPPPPAVVTSPPRPETPPLPVTSSPPPVTSPPPPPATSSPPHPAPSPPPPATADSEIRQSRGAGPAAKVLRTLPGRLVTVLETPPPTAATAGGGASRARRRPRDPARPAPPPPSSASSPSSSSSAPPPAKRRRGRPPKRRLLGGGGARSRRRRHLGGRGPAPSAEARKRRGRPVRGAGAGGGAGQSPPRKRRRGRPPKMASPGEGGGGGGEGSNPPSPRPATPTPPRTTRARPGAPLAPPLQREPRRRPRPPEDSGDEGVATAGGGGARRREPHPQPPAKRRRG…
SIO_010081: LOC117010225
subclass of: SO_0000673
so part of: LOC117010225
location: complement(join(185344..186241,186371..187026,190597..190680,192595..192768,195557..195814,198213..198327,200085..200281,202319..202488,204218..204420,208388..208531,209577..209797,212343..212375,216016..216191,219615..219758,222822..223004,224165..224472,226212..226381,228232..228418,229979..230115,231555..231747,237134..237303,237598..237734,240574..240751,243703..244001,244595..244690,247117..247206,249679..249754,250404..250462,251159..251306,255993..256133,257242..257397))
location: region:185344-257397:-1
so has part: feature:257242-257397:-1:exon
so has part: feature:255993-256133:-1:exon
so has part: feature:251159-251306:-1:exon
so has part: feature:250404-250462:-1:exon
so has part: feature:249679-249754:-1:exon
so has part: feature:247117-247206:-1:exon
so has part: feature:244595-244690:-1:exon
so has part: feature:243703-244001:-1:exon
so has part: feature:240574-240751:-1:exon
so has part: feature:237598-237734:-1:exon
so has part: feature:237134-237303:-1:exon
so has part: feature:231555-231747:-1:exon
so has part: feature:229979-230115:-1:exon
so has part: feature:228232-228418:-1:exon
so has part: feature:226212-226381:-1:exon
so has part: feature:224165-224472:-1:exon
so has part: feature:222822-223004:-1:exon
so has part: feature:219615-219758:-1:exon
so has part: feature:216016-216191:-1:exon
so has part: feature:212343-212375:-1:exon
so has part: feature:209577-209797:-1:exon
so has part: feature:208388-208531:-1:exon
so has part: feature:204218-204420:-1:exon
so has part: feature:202319-202488:-1:exon
so has part: feature:200085-200281:-1:exon
so has part: feature:198213-198327:-1:exon
so has part: feature:195557-195814:-1:exon
so has part: feature:192595-192768:-1:exon
so has part: feature:190597-190680:-1:exon
so has part: feature:186371-187026:-1:exon
so has part: feature:185344-186241:-1:exon

XP_032940408.1
type: Protein
SIO_000068: ncbiprotein

position:257397:-1
position: 257397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257242-257397:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:255993-256133:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:251159-251306:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:250404-250462:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249679-249754:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:247117-247206:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:244595-244690:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:243703-244001:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:240574-240751:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:237598-237734:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:237134-237303:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:231555-231747:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:229979-230115:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:228232-228418:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:226212-226381:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:224165-224472:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:222822-223004:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:219615-219758:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:216016-216191:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:212343-212375:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:209577-209797:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:208388-208531:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:204218-204420:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:202319-202488:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:200085-200281:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:198213-198327:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:195557-195814:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:192595-192768:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:190597-190680:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:186371-187026:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:185344-186241:-1:exon

LOC117010221
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010221
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(216248..220929)
location: region:216248-220929:-1
so has part: feature:216248-220929:-1:exon
subclass of: SO_0000011

117010221
type: Gene
SIO_000068: ncbigene

position:216248:-1
position: 216248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220929:-1
position: 220929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216248-220929:-1:exon

LOC117010221
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117010221
product: uncharacterized LOC117010221
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_004420592.1
SIO_010081: LOC117010221
subclass of: SO_0000673
so part of: LOC117010221
location: complement(join(216248..216326,219615..219758,220891..220929))
location: region:216248-220929:-1
so has part: feature:220891-220929:-1:exon
so has part: feature:219615-219758:-1:exon
so has part: feature:216248-216326:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:220891-220929:-1:exon

position:220891:-1
position: 220891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:219615-219758:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:216248-216326:-1:exon

position:216326:-1
position: 216326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117010226
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010226
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(267662..274820)
location: region:267662-274820:-1
so has part: feature:267662-274820:-1:exon
subclass of: SO_0000010

117010226
type: Gene
SIO_000068: ncbigene

position:267662:-1
position: 267662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274820:-1
position: 274820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267662-274820:-1:exon

LOC117010226
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010226
product: sal-like protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 64% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084518.1
SIO_010081: LOC117010226
subclass of: SO_0000673
so part of: LOC117010226
location: complement(join(267662..267686,268019..268109,273258..273500,274681..274820))
location: region:267662-274820:-1
so has part: feature:274681-274820:-1:exon
so has part: feature:273258-273500:-1:exon
so has part: feature:268019-268109:-1:exon
so has part: feature:267662-267686:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:274681-274820:-1:exon

position:274681:-1
position: 274681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:273258-273500:-1:exon

position:273258:-1
position: 273258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273500:-1
position: 273500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:268019-268109:-1:exon

position:268019:-1
position: 268019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268109:-1
position: 268109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:267662-267686:-1:exon

position:267686:-1
position: 267686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117010226
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010226
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sal-like protein 2
translation: MLCATAKMAAPVVSRWRLLLFQDGDAHCSKMAASRPEVPVQPGNGDKEKGRRGARGGPGGALGVVRGVSRRGRGALGRHLALEAERERRRLPGAPPSCPVLPPPPPPPPPSGLPSPPSEEAGPAGSHRCAHLSQDAAPASPAPWKWSVRRRRRAPRTQVPQPR
SIO_010081: LOC117010226
subclass of: SO_0000673
so part of: LOC117010226
location: complement(join(267669..267686,268019..268109,273258..273500,274681..274820))
location: region:267669-274820:-1
so has part: feature:274681-274820:-1:exon
so has part: feature:273258-273500:-1:exon
so has part: feature:268019-268109:-1:exon
so has part: feature:267669-267686:-1:exon

XP_032940409.1
type: Protein
SIO_000068: ncbiprotein

position:267669:-1
position: 267669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274681-274820:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:273258-273500:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:268019-268109:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:267669-267686:-1:exon

PPP4C
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: PPP4C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(275836..285434)
location: region:275836-285434:-1
so has part: feature:275836-285434:-1:exon
subclass of: SO_0000010

117010219
type: Gene
SIO_000068: ncbigene

position:275836:-1
position: 275836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285434:-1
position: 285434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275836-285434:-1:exon

PPP4C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PPP4C
product: protein phosphatase 4 catalytic subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033084512.2
SIO_010081: PPP4C
subclass of: SO_0000673
so part of: PPP4C
location: complement(join(275836..276030,277679..277868,279224..279350,280574..280747,282159..282260,282530..282580,282740..282791,283990..284015,284508..285434))
location: region:275836-285434:-1
so has part: feature:284508-285434:-1:exon
so has part: feature:283990-284015:-1:exon
so has part: feature:282740-282791:-1:exon
so has part: feature:282530-282580:-1:exon
so has part: feature:282159-282260:-1:exon
so has part: feature:280574-280747:-1:exon
so has part: feature:279224-279350:-1:exon
so has part: feature:277679-277868:-1:exon
so has part: feature:275836-276030:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:284508-285434:-1:exon

position:284508:-1
position: 284508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:283990-284015:-1:exon

position:283990:-1
position: 283990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284015:-1
position: 284015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:282740-282791:-1:exon

position:282740:-1
position: 282740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282791:-1
position: 282791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:282530-282580:-1:exon

position:282530:-1
position: 282530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282580:-1
position: 282580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:282159-282260:-1:exon

position:282159:-1
position: 282159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282260:-1
position: 282260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:280574-280747:-1:exon

position:280574:-1
position: 280574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280747:-1
position: 280747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:279224-279350:-1:exon

position:279224:-1
position: 279224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279350:-1
position: 279350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:277679-277868:-1:exon

position:277679:-1
position: 277679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277868:-1
position: 277868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:275836-276030:-1:exon

position:276030:-1
position: 276030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPP4C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PPP4C
product: protein phosphatase 4 catalytic subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_033084514.2
SIO_010081: PPP4C
subclass of: SO_0000673
so part of: PPP4C
location: complement(join(275836..276030,277679..277868,279224..279350,280574..280747,282159..282260,282530..282580,282740..282791,284477..285430))
location: region:275836-285430:-1
so has part: feature:284477-285430:-1:exon
so has part: feature:282740-282791:-1:exon
so has part: feature:282530-282580:-1:exon
so has part: feature:282159-282260:-1:exon
so has part: feature:280574-280747:-1:exon
so has part: feature:279224-279350:-1:exon
so has part: feature:277679-277868:-1:exon
so has part: feature:275836-276030:-1:exon

position:285430:-1
position: 285430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284477-285430:-1:exon

position:284477:-1
position: 284477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:282740-282791:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:282530-282580:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:282159-282260:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:280574-280747:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279224-279350:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:277679-277868:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:275836-276030:-1:exon

PPP4C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PPP4C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 4 catalytic subunit isoform X1
translation: MGELSDLERQMEQLRRCELIKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTTGWGVSPRGAGYLFGSDVVAQFNAANEVSMICRAHQLVMEGYKWHFGETVLTVWSAPNYCYRCGNVAAILELDEHLQKEFIIFEAAPQETRGIPAKKPVADYFL
SIO_010081: PPP4C
subclass of: SO_0000673
so part of: PPP4C
location: complement(join(275901..276030,277679..277868,279224..279350,280574..280747,282159..282260,282530..282580,282740..282791,283990..284015,284508..284579))
location: region:275901-284579:-1
so has part: feature:284508-284579:-1:exon
so has part: feature:283990-284015:-1:exon
so has part: feature:282740-282791:-1:exon
so has part: feature:282530-282580:-1:exon
so has part: feature:282159-282260:-1:exon
so has part: feature:280574-280747:-1:exon
so has part: feature:279224-279350:-1:exon
so has part: feature:277679-277868:-1:exon
so has part: feature:275901-276030:-1:exon

XP_032940403.1
type: Protein
SIO_000068: ncbiprotein

position:275901:-1
position: 275901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284579:-1
position: 284579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284508-284579:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:283990-284015:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:282740-282791:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:282530-282580:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:282159-282260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280574-280747:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:279224-279350:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:277679-277868:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:275901-276030:-1:exon

PPP4C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PPP4C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 4 catalytic subunit isoform X2
translation: MGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTTGWGVSPRGAGYLFGSDVVAQFNAANEVSMICRAHQLVMEGYKWHFGETVLTVWSAPNYCYRCGNVAAILELDEHLQKEFIIFEAAPQETRGIPAKKPVADYFL
SIO_010081: PPP4C
subclass of: SO_0000673
so part of: PPP4C
location: complement(join(275901..276030,277679..277868,279224..279350,280574..280747,282159..282224))
location: region:275901-282224:-1
so has part: feature:282159-282224:-1:exon
so has part: feature:280574-280747:-1:exon
so has part: feature:279224-279350:-1:exon
so has part: feature:277679-277868:-1:exon
so has part: feature:275901-276030:-1:exon

XP_032940405.1
type: Protein
SIO_000068: ncbiprotein

position:282224:-1
position: 282224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282159-282224:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:280574-280747:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279224-279350:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:277679-277868:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:275901-276030:-1:exon

LOC117010259
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010259
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 291300..321023
location: region:291300-321023:1
so has part: feature:291300-321023:1:exon
subclass of: SO_0000010

117010259
type: Gene
SIO_000068: ncbigene

position:291300:1
position: 291300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321023:1
position: 321023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291300-321023:1:exon

LOC117010259
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010259
product: uncharacterized LOC117010259
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084552.1
SIO_010081: LOC117010259
subclass of: SO_0000673
so part of: LOC117010259
location: join(291300..291332,293535..293645,294218..294298,294674..294838,301927..302016,302543..302563,319534..321023)
location: region:291300-321023:1
so has part: feature:291300-291332:1:exon
so has part: feature:293535-293645:1:exon
so has part: feature:294218-294298:1:exon
so has part: feature:294674-294838:1:exon
so has part: feature:301927-302016:1:exon
so has part: feature:302543-302563:1:exon
so has part: feature:319534-321023:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:291300-291332:1:exon

position:291332:1
position: 291332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:293535-293645:1:exon

position:293535:1
position: 293535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293645:1
position: 293645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:294218-294298:1:exon

position:294218:1
position: 294218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294298:1
position: 294298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:294674-294838:1:exon

position:294674:1
position: 294674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294838:1
position: 294838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:301927-302016:1:exon

position:301927:1
position: 301927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302016:1
position: 302016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:302543-302563:1:exon

position:302543:1
position: 302543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302563:1
position: 302563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:319534-321023:1:exon

position:319534:1
position: 319534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117010259
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010259
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117010259
translation: MAGRAPSKDTQEEKPRLNQTDLPSCLKLDVLTKELWSNKDLKNSLLLSCLKLPNVKDPGEEPTCPSYTCISAPTRRNCSTIRSSQTYQPIQCPEAGQEMQQEMQQKLQQEMQQGHKCRAKSTEDFKDIDLCCSPEVLEKATLEMEKLLANEKQQLITTDPQEANLDHQTPKTPRDHRTFPRTSRRFQEWHNSGDPAPMLDHPTPNHIPLCLGTSPGYQPPGLGQESSQGWVIAVGTLVPLVFLVFLVFLGLRWWKGRKGRRGRREKRCSNGEALKAEEGLEEKEDEDEM
SIO_010081: LOC117010259
subclass of: SO_0000673
so part of: LOC117010259
location: join(293539..293645,294218..294298,294674..294838,301927..302016,302543..302563,319534..319939)
location: region:293539-319939:1
so has part: feature:293539-293645:1:exon
so has part: feature:294218-294298:1:exon
so has part: feature:294674-294838:1:exon
so has part: feature:301927-302016:1:exon
so has part: feature:302543-302563:1:exon
so has part: feature:319534-319939:1:exon

XP_032940443.1
type: Protein
SIO_000068: ncbiprotein

position:293539:1
position: 293539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319939:1
position: 319939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293539-293645:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:294218-294298:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:294674-294838:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:301927-302016:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:302543-302563:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:319534-319939:1:exon

GDPD3
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: GDPD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(323593..337065)
location: region:323593-337065:-1
so has part: feature:323593-337065:-1:exon
subclass of: SO_0000010

117010227
type: Gene
SIO_000068: ncbigene

position:323593:-1
position: 323593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337065:-1
position: 337065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323593-337065:-1:exon

GDPD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: GDPD3
product: glycerophosphodiester phosphodiesterase domain containing 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033084520.1
SIO_010081: GDPD3
subclass of: SO_0000673
so part of: GDPD3
location: complement(join(323593..323790,325024..325075,325174..325233,328460..328593,332756..332845,333709..333827,334078..334123,335116..335251,336122..336164,336926..337065))
location: region:323593-337065:-1
so has part: feature:336926-337065:-1:exon
so has part: feature:336122-336164:-1:exon
so has part: feature:335116-335251:-1:exon
so has part: feature:334078-334123:-1:exon
so has part: feature:333709-333827:-1:exon
so has part: feature:332756-332845:-1:exon
so has part: feature:328460-328593:-1:exon
so has part: feature:325174-325233:-1:exon
so has part: feature:325024-325075:-1:exon
so has part: feature:323593-323790:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:336926-337065:-1:exon

position:336926:-1
position: 336926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:336122-336164:-1:exon

position:336122:-1
position: 336122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336164:-1
position: 336164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:335116-335251:-1:exon

position:335116:-1
position: 335116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335251:-1
position: 335251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:334078-334123:-1:exon

position:334078:-1
position: 334078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334123:-1
position: 334123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:333709-333827:-1:exon

position:333709:-1
position: 333709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333827:-1
position: 333827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:332756-332845:-1:exon

position:332756:-1
position: 332756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332845:-1
position: 332845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:328460-328593:-1:exon

position:328460:-1
position: 328460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328593:-1
position: 328593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:325174-325233:-1:exon

position:325174:-1
position: 325174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325233:-1
position: 325233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:325024-325075:-1:exon

position:325024:-1
position: 325024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325075:-1
position: 325075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:323593-323790:-1:exon

position:323790:-1
position: 323790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GDPD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: GDPD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysophospholipase D GDPD3
translation: MAALALGVALGGGLVALGGVLVAKLARRGPEGPRLQREARAVAHRGGAGERIENTLEAFENAVAEGSDWLELDVRRTRDGVVVVSHDRELSRQCGRHLDIGQLDYQDLPPYQSPLEVTFSPGHFSQGCDHRFPRLVEIFERFPRQPISIEIKDDDDDLINDVAALVRRFDRAPITLWASFRERILRKCRRAHPQMPFCFSLERGLLTLLCWYLGLLPLLRLGEAALLFPLPSIINRTYFPVPKGPAGHVLSRVTQSLVLRPSLLRHLRSRGIQVWLWVVNEERDFAEAFGLGATGVITDYPGRLRKFLEGGGGPSPTPRDPSPTPGGETLPREKKGRD
SIO_010081: GDPD3
subclass of: SO_0000673
so part of: GDPD3
location: complement(join(323593..323790,325024..325075,325174..325233,328460..328593,332756..332845,333709..333827,334078..334123,335116..335251,336122..336164,336926..337064))
location: region:323593-337064:-1
so has part: feature:336926-337064:-1:exon
so has part: feature:336122-336164:-1:exon
so has part: feature:335116-335251:-1:exon
so has part: feature:334078-334123:-1:exon
so has part: feature:333709-333827:-1:exon
so has part: feature:332756-332845:-1:exon
so has part: feature:328460-328593:-1:exon
so has part: feature:325174-325233:-1:exon
so has part: feature:325024-325075:-1:exon
so has part: feature:323593-323790:-1:exon

XP_032940411.1
type: Protein
SIO_000068: ncbiprotein

position:337064:-1
position: 337064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336926-337064:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:336122-336164:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:335116-335251:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:334078-334123:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:333709-333827:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:332756-332845:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:328460-328593:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:325174-325233:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:325024-325075:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:323593-323790:-1:exon

BOLA2B
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: BOLA2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(337721..339492)
location: region:337721-339492:-1
so has part: feature:337721-339492:-1:exon
subclass of: SO_0000010

117010254
type: Gene
SIO_000068: ncbigene

position:337721:-1
position: 337721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339492:-1
position: 339492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337721-339492:-1:exon

BOLA2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: BOLA2B
product: bolA family member 2B
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084548.2
SIO_010081: BOLA2B
subclass of: SO_0000673
so part of: BOLA2B
location: complement(join(337721..337939,338766..338860,339389..339492))
location: region:337721-339492:-1
so has part: feature:339389-339492:-1:exon
so has part: feature:338766-338860:-1:exon
so has part: feature:337721-337939:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:339389-339492:-1:exon

position:339389:-1
position: 339389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:338766-338860:-1:exon

position:338766:-1
position: 338766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338860:-1
position: 338860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:337721-337939:-1:exon

position:337939:-1
position: 337939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BOLA2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: BOLA2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bolA-like protein 2
translation: MEAEMAPPTAEELRERLRERLQAEHVEVQDNPQLCPGSFRVFVVSGKFRGLKTLQRHRLVNEALGEELGRIHALEQKTLTPEQWEEQQRPSLA
SIO_010081: BOLA2B
subclass of: SO_0000673
so part of: BOLA2B
location: complement(join(337831..337939,338766..338860,339389..339466))
location: region:337831-339466:-1
so has part: feature:339389-339466:-1:exon
so has part: feature:338766-338860:-1:exon
so has part: feature:337831-337939:-1:exon

XP_032940439.1
type: Protein
SIO_000068: ncbiprotein

position:337831:-1
position: 337831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339466:-1
position: 339466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339389-339466:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:338766-338860:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337831-337939:-1:exon

LOC117010252
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010252
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 340232..343265
location: region:340232-343265:1
so has part: feature:340232-343265:1:exon
subclass of: SO_0000010

117010252
type: Gene
SIO_000068: ncbigene

position:340232:1
position: 340232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343265:1
position: 343265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340232-343265:1:exon

LOC117010252
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010252
product: structure-specific endonuclease subunit SLX1-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084546.1
SIO_010081: LOC117010252
subclass of: SO_0000673
so part of: LOC117010252
location: join(340232..340440,341137..341188,341349..341651,342004..342134,343076..343265)
location: region:340232-343265:1
so has part: feature:340232-340440:1:exon
so has part: feature:341137-341188:1:exon
so has part: feature:341349-341651:1:exon
so has part: feature:342004-342134:1:exon
so has part: feature:343076-343265:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:340232-340440:1:exon

position:340440:1
position: 340440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:341137-341188:1:exon

position:341137:1
position: 341137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341188:1
position: 341188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:341349-341651:1:exon

position:341349:1
position: 341349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341651:1
position: 341651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:342004-342134:1:exon

position:342004:1
position: 342004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342134:1
position: 342134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:343076-343265:1:exon

position:343076:1
position: 343076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117010252
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010252
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: structure-specific endonuclease subunit SLX1-like
translation: MAAMRAVYLLRSAAPQGRARGRTYVGFTVDPRRRLRQHNGGRRRGGARRTSGRGPWEMEVFVHGFPSDVAALRFEWAWQHPNSSRRLLAPPPRRPREQPISFALRLLPRLLRAPPWSRLPLRVRWLRPPGPEVELAPPPHVVEEKGAGLPRLKRKKGRGLEAVGEGRGCGLCEEAQATPLLRCPRPQCSMAAHPPCLARLFLAPEPQQLLPVTGTCPSCHTPLLWGDLIRRCLGEAEPEEEWAEPDDVIISSSAPT
SIO_010081: LOC117010252
subclass of: SO_0000673
so part of: LOC117010252
location: join(340274..340440,341137..341188,341349..341651,342004..342134,343076..343193)
location: region:340274-343193:1
so has part: feature:340274-340440:1:exon
so has part: feature:341137-341188:1:exon
so has part: feature:341349-341651:1:exon
so has part: feature:342004-342134:1:exon
so has part: feature:343076-343193:1:exon

XP_032940437.1
type: Protein
SIO_000068: ncbiprotein

position:340274:1
position: 340274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343193:1
position: 343193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340274-340440:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:341137-341188:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:341349-341651:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:342004-342134:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:343076-343193:1:exon

SGF29
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: SGF29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(343945..366045)
location: region:343945-366045:-1
so has part: feature:343945-366045:-1:exon
subclass of: SO_0000010

117010217
type: Gene
SIO_000068: ncbigene

position:343945:-1
position: 343945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366045:-1
position: 366045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343945-366045:-1:exon

SGF29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SGF29
product: SAGA complex associated factor 29
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033084511.1
SIO_010081: SGF29
subclass of: SO_0000673
so part of: SGF29
location: complement(join(343945..344122,350094..350256,354566..354601,355356..355502,359989..360118,360293..360357,364293..364365,364436..364511,365931..366045))
location: region:343945-366045:-1
so has part: feature:365931-366045:-1:exon
so has part: feature:364436-364511:-1:exon
so has part: feature:364293-364365:-1:exon
so has part: feature:360293-360357:-1:exon
so has part: feature:359989-360118:-1:exon
so has part: feature:355356-355502:-1:exon
so has part: feature:354566-354601:-1:exon
so has part: feature:350094-350256:-1:exon
so has part: feature:343945-344122:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:365931-366045:-1:exon

position:365931:-1
position: 365931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:364436-364511:-1:exon

position:364436:-1
position: 364436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364511:-1
position: 364511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:364293-364365:-1:exon

position:364293:-1
position: 364293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364365:-1
position: 364365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:360293-360357:-1:exon

position:360293:-1
position: 360293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360357:-1
position: 360357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:359989-360118:-1:exon

position:359989:-1
position: 359989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360118:-1
position: 360118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:355356-355502:-1:exon

position:355356:-1
position: 355356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355502:-1
position: 355502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:354566-354601:-1:exon

position:354566:-1
position: 354566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354601:-1
position: 354601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:350094-350256:-1:exon

position:350094:-1
position: 350094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350256:-1
position: 350256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:343945-344122:-1:exon

position:344122:-1
position: 344122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SGF29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SGF29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SAGA-associated factor 29
translation: MALVSADSRIAELLGELHQLIKQTQEERSRSEHNLLNIQKTHERMQTENKISPYYRTKLRGLYTTAKADAEAECNVLRRALDKIAEIKSLLEERRIAAKIAGIYSEAEPPRKTMRRGVLMTLLQQSAMTLPLWIGKPGEKPPPLCGAVPAAGDYVAKPGDKVAARVKALEGDEQWILAEVVSYSHAANKYEVDDIDEEGKERHTLSRRRIIPLPQWKTNPETDPEALFHKEQLVLALYPQTTCFYRALIHAPPQRPQDDYSVLFEDTSYADGYSPPLNVAQRYVVACKETKKK
SIO_010081: SGF29
subclass of: SO_0000673
so part of: SGF29
location: complement(join(344006..344122,350094..350256,354566..354601,355356..355502,359989..360118,360293..360357,364293..364365,364436..364511,365931..366005))
location: region:344006-366005:-1
so has part: feature:365931-366005:-1:exon
so has part: feature:364436-364511:-1:exon
so has part: feature:364293-364365:-1:exon
so has part: feature:360293-360357:-1:exon
so has part: feature:359989-360118:-1:exon
so has part: feature:355356-355502:-1:exon
so has part: feature:354566-354601:-1:exon
so has part: feature:350094-350256:-1:exon
so has part: feature:344006-344122:-1:exon

XP_032940402.1
type: Protein
SIO_000068: ncbiprotein

position:344006:-1
position: 344006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366005:-1
position: 366005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365931-366005:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:364436-364511:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:364293-364365:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:360293-360357:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:359989-360118:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:355356-355502:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:354566-354601:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:350094-350256:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:344006-344122:-1:exon

CLN3
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: CLN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 366294..380353
location: region:366294-380353:1
so has part: feature:366294-380353:1:exon
subclass of: SO_0000010

117010250
type: Gene
SIO_000068: ncbigene

position:366294:1
position: 366294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380353:1
position: 380353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366294-380353:1:exon

CLN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CLN3
product: CLN3 lysosomal/endosomal transmembrane protein, battenin, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084543.1
SIO_010081: CLN3
subclass of: SO_0000673
so part of: CLN3
location: join(366294..366333,366566..366629,367018..367093,367199..367252,367974..368053,368943..369028,369363..369435,370309..370449,371286..371424,372306..372374,372641..372696,374522..374615,378602..378745,380008..380353)
location: region:366294-380353:1
so has part: feature:366294-366333:1:exon
so has part: feature:366566-366629:1:exon
so has part: feature:367018-367093:1:exon
so has part: feature:367199-367252:1:exon
so has part: feature:367974-368053:1:exon
so has part: feature:368943-369028:1:exon
so has part: feature:369363-369435:1:exon
so has part: feature:370309-370449:1:exon
so has part: feature:371286-371424:1:exon
so has part: feature:372306-372374:1:exon
so has part: feature:372641-372696:1:exon
so has part: feature:374522-374615:1:exon
so has part: feature:378602-378745:1:exon
so has part: feature:380008-380353:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:366294-366333:1:exon

position:366333:1
position: 366333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:366566-366629:1:exon

position:366566:1
position: 366566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366629:1
position: 366629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:367018-367093:1:exon

position:367018:1
position: 367018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367093:1
position: 367093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:367199-367252:1:exon

position:367199:1
position: 367199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367252:1
position: 367252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:367974-368053:1:exon

position:367974:1
position: 367974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368053:1
position: 368053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:368943-369028:1:exon

position:368943:1
position: 368943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369028:1
position: 369028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:369363-369435:1:exon

position:369363:1
position: 369363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369435:1
position: 369435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:370309-370449:1:exon

position:370309:1
position: 370309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370449:1
position: 370449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:371286-371424:1:exon

position:371286:1
position: 371286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371424:1
position: 371424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:372306-372374:1:exon

position:372306:1
position: 372306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372374:1
position: 372374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:372641-372696:1:exon

position:372641:1
position: 372641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372696:1
position: 372696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:374522-374615:1:exon

position:374522:1
position: 374522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374615:1
position: 374615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:378602-378745:1:exon

position:378602:1
position: 378602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378745:1
position: 378745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:380008-380353:1:exon

position:380008:1
position: 380008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CLN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CLN3
product: CLN3 lysosomal/endosomal transmembrane protein, battenin, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084544.1
SIO_010081: CLN3
subclass of: SO_0000673
so part of: CLN3
location: join(366294..366333,366566..366629,367018..367093,367199..367252,368943..369028,370309..370449,371286..371424,372306..372374,372641..372696,374522..374615,378602..378745,380008..380353)
location: region:366294-380353:1
so has part: feature:366294-366333:1:exon
so has part: feature:366566-366629:1:exon
so has part: feature:367018-367093:1:exon
so has part: feature:367199-367252:1:exon
so has part: feature:368943-369028:1:exon
so has part: feature:370309-370449:1:exon
so has part: feature:371286-371424:1:exon
so has part: feature:372306-372374:1:exon
so has part: feature:372641-372696:1:exon
so has part: feature:374522-374615:1:exon
so has part: feature:378602-378745:1:exon
so has part: feature:380008-380353:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:366294-366333:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:366566-366629:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:367018-367093:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:367199-367252:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:368943-369028:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:370309-370449:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:371286-371424:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:372306-372374:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:372641-372696:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:374522-374615:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:378602-378745:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:380008-380353:1:exon

CLN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CLN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: battenin isoform X1
translation: MADEEPLLPPAEDAAPPPPPPTPSWRIGAAFWILGLCNNLPYVVMLSAARDLLDPRPGEEPRNRTRHDCNPVGTGAVLLADVVPGLGVKLLMPLLGPYLPYRYRAVGVALCLWGGVSAVASASGSLSSLGGVALGSVGAGLGEVTFLTLAASYSSTGLSHWSAGTGAAGLGGALGFWGLRALLPLPQSLLPLLVLPPLMLASFFFLLGPAPPPPPLPPSPGMGGASEDSGGGAKTRGRGQEQTGSVAKAALQQGAPLAIVYFAEYFVNQGLMELLYFPSSPLPHSAQYRTLQLLYQAGVFVSRSSLRCLRLRRIWGLALAQALLALFLLAAVAVNHLLPWLGLAAALAAGEGLLGGGAYGNAFGNVGEQVPLPQQPLAVAVVTLMAEVAIAAAGGVGLGAHAAFCGQE
SIO_010081: CLN3
subclass of: SO_0000673
so part of: CLN3
location: join(366303..366333,366566..366629,367018..367093,367199..367252,367974..368053,368943..369028,369363..369435,370309..370449,371286..371424,372306..372374,372641..372696,374522..374615,378602..378745,380008..380127)
location: region:366303-380127:1
so has part: feature:366303-366333:1:exon
so has part: feature:366566-366629:1:exon
so has part: feature:367018-367093:1:exon
so has part: feature:367199-367252:1:exon
so has part: feature:367974-368053:1:exon
so has part: feature:368943-369028:1:exon
so has part: feature:369363-369435:1:exon
so has part: feature:370309-370449:1:exon
so has part: feature:371286-371424:1:exon
so has part: feature:372306-372374:1:exon
so has part: feature:372641-372696:1:exon
so has part: feature:374522-374615:1:exon
so has part: feature:378602-378745:1:exon
so has part: feature:380008-380127:1:exon

XP_032940434.1
type: Protein
SIO_000068: ncbiprotein

position:366303:1
position: 366303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380127:1
position: 380127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366303-366333:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:366566-366629:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:367018-367093:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:367199-367252:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:367974-368053:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:368943-369028:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:369363-369435:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:370309-370449:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:371286-371424:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:372306-372374:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:372641-372696:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:374522-374615:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:378602-378745:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:380008-380127:1:exon

CLN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CLN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: battenin isoform X2
translation: MADEEPLLPPAEDAAPPPPPPTPSWRIGAAFWILGLCNNLPYVVMLSAARDLLDPRPGEEPRNRTRHDCNPVGTGVSCGGRGLVPVGRSQRRGLGQWEPEQPGSTGLSHWSAGTGAAGLGGALGFWGLRALLPLPQSLLPLLVLPPLMLASFFFLLGPAPPPPPLPPSPGMGGASEDSGGGAKTRGRGQEQTGSVAKAALQQGAPLAIVYFAEYFVNQGLMELLYFPSSPLPHSAQYRTLQLLYQAGVFVSRSSLRCLRLRRIWGLALAQALLALFLLAAVAVNHLLPWLGLAAALAAGEGLLGGGAYGNAFGNVGEQVPLPQQPLAVAVVTLMAEVAIAAAGGVGLGAHAAFCGQE
SIO_010081: CLN3
subclass of: SO_0000673
so part of: CLN3
location: join(366303..366333,366566..366629,367018..367093,367199..367252,368943..369028,370309..370449,371286..371424,372306..372374,372641..372696,374522..374615,378602..378745,380008..380127)
location: region:366303-380127:1
so has part: feature:366303-366333:1:exon
so has part: feature:366566-366629:1:exon
so has part: feature:367018-367093:1:exon
so has part: feature:367199-367252:1:exon
so has part: feature:368943-369028:1:exon
so has part: feature:370309-370449:1:exon
so has part: feature:371286-371424:1:exon
so has part: feature:372306-372374:1:exon
so has part: feature:372641-372696:1:exon
so has part: feature:374522-374615:1:exon
so has part: feature:378602-378745:1:exon
so has part: feature:380008-380127:1:exon

XP_032940435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:366303-366333:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:366566-366629:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:367018-367093:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:367199-367252:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:368943-369028:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:370309-370449:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:371286-371424:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:372306-372374:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:372641-372696:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:374522-374615:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:378602-378745:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:380008-380127:1:exon

LOC117010261
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010261
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 381831..424388
location: region:381831-424388:1
so has part: feature:381831-424388:1:exon
subclass of: SO_0000010

117010261
type: Gene
SIO_000068: ncbigene

position:381831:1
position: 381831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424388:1
position: 424388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381831-424388:1:exon

LOC117010261
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010261
product: eukaryotic translation initiation factor 3 subunit C-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084556.2
SIO_010081: LOC117010261
subclass of: SO_0000673
so part of: LOC117010261
location: join(381831..381941,382030..382157,382996..383061,383941..384016,386284..386397,388825..388950,389213..389264,391776..391861,393525..393649,395261..395405,397385..397488,398466..398607,401043..401168,404763..404856,408482..408842,410600..410759,413744..414107,417331..417490,418876..418941,420552..420639,422813..422975,424072..424388)
location: region:381831-424388:1
so has part: feature:381831-381941:1:exon
so has part: feature:382030-382157:1:exon
so has part: feature:382996-383061:1:exon
so has part: feature:383941-384016:1:exon
so has part: feature:386284-386397:1:exon
so has part: feature:388825-388950:1:exon
so has part: feature:389213-389264:1:exon
so has part: feature:391776-391861:1:exon
so has part: feature:393525-393649:1:exon
so has part: feature:395261-395405:1:exon
so has part: feature:397385-397488:1:exon
so has part: feature:398466-398607:1:exon
so has part: feature:401043-401168:1:exon
so has part: feature:404763-404856:1:exon
so has part: feature:408482-408842:1:exon
so has part: feature:410600-410759:1:exon
so has part: feature:413744-414107:1:exon
so has part: feature:417331-417490:1:exon
so has part: feature:418876-418941:1:exon
so has part: feature:420552-420639:1:exon
so has part: feature:422813-422975:1:exon
so has part: feature:424072-424388:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:381831-381941:1:exon

position:381941:1
position: 381941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:382030-382157:1:exon

position:382030:1
position: 382030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382157:1
position: 382157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:382996-383061:1:exon

position:382996:1
position: 382996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383061:1
position: 383061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:383941-384016:1:exon

position:383941:1
position: 383941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384016:1
position: 384016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:386284-386397:1:exon

position:386284:1
position: 386284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386397:1
position: 386397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:388825-388950:1:exon

position:388825:1
position: 388825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388950:1
position: 388950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:389213-389264:1:exon

position:389213:1
position: 389213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389264:1
position: 389264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:391776-391861:1:exon

position:391776:1
position: 391776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391861:1
position: 391861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:393525-393649:1:exon

position:393525:1
position: 393525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393649:1
position: 393649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:395261-395405:1:exon

position:395261:1
position: 395261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395405:1
position: 395405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:397385-397488:1:exon

position:397385:1
position: 397385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397488:1
position: 397488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:398466-398607:1:exon

position:398466:1
position: 398466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398607:1
position: 398607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:401043-401168:1:exon

position:401043:1
position: 401043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401168:1
position: 401168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:404763-404856:1:exon

position:404763:1
position: 404763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404856:1
position: 404856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:408482-408842:1:exon

position:408482:1
position: 408482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408842:1
position: 408842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:410600-410759:1:exon

position:410600:1
position: 410600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410759:1
position: 410759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:413744-414107:1:exon

position:413744:1
position: 413744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414107:1
position: 414107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:417331-417490:1:exon

position:417331:1
position: 417331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417490:1
position: 417490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:418876-418941:1:exon

position:418876:1
position: 418876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418941:1
position: 418941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:420552-420639:1:exon

position:420552:1
position: 420552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420639:1
position: 420639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:422813-422975:1:exon

position:422813:1
position: 422813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422975:1
position: 422975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:424072-424388:1:exon

position:424072:1
position: 424072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117010261
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010261
product: eukaryotic translation initiation factor 3 subunit C-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084554.2
SIO_010081: LOC117010261
subclass of: SO_0000673
so part of: LOC117010261
location: join(381831..381941,382030..382157,382996..383061,383941..384016,386284..386397,388825..388950,389213..389264,391776..391861,393525..393649,395261..395405,397385..397488,398466..398607,401043..401168,404763..404856,408482..408842,410600..410759,413744..413959,414755..414902,417331..417490,418876..418941,420552..420639,422813..422975,424072..424388)
location: region:381831-424388:1
so has part: feature:381831-381941:1:exon
so has part: feature:382030-382157:1:exon
so has part: feature:382996-383061:1:exon
so has part: feature:383941-384016:1:exon
so has part: feature:386284-386397:1:exon
so has part: feature:388825-388950:1:exon
so has part: feature:389213-389264:1:exon
so has part: feature:391776-391861:1:exon
so has part: feature:393525-393649:1:exon
so has part: feature:395261-395405:1:exon
so has part: feature:397385-397488:1:exon
so has part: feature:398466-398607:1:exon
so has part: feature:401043-401168:1:exon
so has part: feature:404763-404856:1:exon
so has part: feature:408482-408842:1:exon
so has part: feature:410600-410759:1:exon
so has part: feature:413744-413959:1:exon
so has part: feature:414755-414902:1:exon
so has part: feature:417331-417490:1:exon
so has part: feature:418876-418941:1:exon
so has part: feature:420552-420639:1:exon
so has part: feature:422813-422975:1:exon
so has part: feature:424072-424388:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:381831-381941:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382030-382157:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:382996-383061:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:383941-384016:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:386284-386397:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:388825-388950:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389213-389264:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:391776-391861:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:393525-393649:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:395261-395405:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:397385-397488:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:398466-398607:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:401043-401168:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:404763-404856:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:408482-408842:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:410600-410759:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:413744-413959:1:exon

position:413959:1
position: 413959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:414755-414902:1:exon

position:414755:1
position: 414755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414902:1
position: 414902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:417331-417490:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:418876-418941:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:420552-420639:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:422813-422975:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:424072-424388:1:exon

LOC117010261
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010261
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 3 subunit C-like isoform X2
translation: MSRFFTTGSDSESESSASGDETAPKAPGGPYSKPLLLSEDEEDTKRVVRSARDKRYEELTNLIRSIRNAMKIRDVSRCLEEFELLGRAWTKAKGVVDRDGVPRFYLRILADLEDYLNELWEDKEGKKKMNKNNAKALSSLRQKLRKHNRDYEGAIAAYRQNPEQSDEDEEKSRRDSEGSASSSGAEDDAGNFLKRRDREEPRGRYKEEESESESESDEDWGDSASESDSESDEDDGKFTSLASKFLKKDEERRGAERRREEKAKKKLERKSRREEEEEEEEGGEWEKVKCGVPLVKEKPKMFAKGTEITVGLVVKKLNEILQARGKKGTDRAAQIELLQHLVAVAHEHNLGVPLELKIKFNIVASLYDYNPNLAAYMKPELWQKCLGCIEELLELLFAHPEIFVGENVLEESENLSNPEQPFRVRGCVLTLVERMDEEFTKIMQNTDPHSQEYVEHLKDEARVCAIIARLQRYLQGKGSPEELCRVYLRRVLHTYYKFDYGAARRKGQVKDGAGQVKEGAGQVKEGQGKEEEKLEDEQKVKEDAQVKENEAQVKDEEEEEEDSEALMERLCRFVYAKDRTDRIRTCAILCHIYHHALHSRWYRARDLMLMSHLQDNIQHADPPVQILYNRTMVQLGICAFRQGLIKDAHNALLDIQSSGRAKELLGQGLLLRSLQERNAEQEKVEKRRQVPFHMHVNLELLECVYLVAAMLLEIPYMAAHEFDARRRMISKQFHHQLRVGERQPLLGPPESMREHVVAASKAMKTGDWRRCHRFVVNEKMNGKVWDLFPEADQVRAMLVRKIQEESLRTYLFTYSSVYDSISMETLAAMFELDLPTVHGIISKMIINEELMASLDQPTATVMMHRTEPTATQNLALQLAEKLGNLVENNERVLDQRQGAYGGYFRDQKDGGYRKGDGYLRRGGFRQERGNY
SIO_010081: LOC117010261
subclass of: SO_0000673
so part of: LOC117010261
location: join(382060..382157,382996..383061,383941..384016,386284..386397,388825..388950,389213..389264,391776..391861,393525..393649,395261..395405,397385..397488,398466..398607,401043..401168,404763..404856,408482..408842,410600..410759,413744..414107,417331..417490,418876..418941,420552..420639,422813..422975,424072..424151)
location: region:382060-424151:1
so has part: feature:382060-382157:1:exon
so has part: feature:382996-383061:1:exon
so has part: feature:383941-384016:1:exon
so has part: feature:386284-386397:1:exon
so has part: feature:388825-388950:1:exon
so has part: feature:389213-389264:1:exon
so has part: feature:391776-391861:1:exon
so has part: feature:393525-393649:1:exon
so has part: feature:395261-395405:1:exon
so has part: feature:397385-397488:1:exon
so has part: feature:398466-398607:1:exon
so has part: feature:401043-401168:1:exon
so has part: feature:404763-404856:1:exon
so has part: feature:408482-408842:1:exon
so has part: feature:410600-410759:1:exon
so has part: feature:413744-414107:1:exon
so has part: feature:417331-417490:1:exon
so has part: feature:418876-418941:1:exon
so has part: feature:420552-420639:1:exon
so has part: feature:422813-422975:1:exon
so has part: feature:424072-424151:1:exon

XP_032940447.1
type: Protein
SIO_000068: ncbiprotein

position:382060:1
position: 382060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424151:1
position: 424151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:382060-382157:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382996-383061:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383941-384016:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:386284-386397:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:388825-388950:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389213-389264:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:391776-391861:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:393525-393649:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:395261-395405:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:397385-397488:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:398466-398607:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:401043-401168:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:404763-404856:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:408482-408842:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:410600-410759:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:413744-414107:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:417331-417490:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:418876-418941:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:420552-420639:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:422813-422975:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:424072-424151:1:exon

LOC117010261
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010261
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 3 subunit C-like isoform X1
translation: MSRFFTTGSDSESESSASGDETAPKAPGGPYSKPLLLSEDEEDTKRVVRSARDKRYEELTNLIRSIRNAMKIRDVSRCLEEFELLGRAWTKAKGVVDRDGVPRFYLRILADLEDYLNELWEDKEGKKKMNKNNAKALSSLRQKLRKHNRDYEGAIAAYRQNPEQSDEDEEKSRRDSEGSASSSGAEDDAGNFLKRRDREEPRGRYKEEESESESESDEDWGDSASESDSESDEDDGKFTSLASKFLKKDEERRGAERRREEKAKKKLERKSRREEEEEEEEGGEWEKVKCGVPLVKEKPKMFAKGTEITVGLVVKKLNEILQARGKKGTDRAAQIELLQHLVAVAHEHNLGVPLELKIKFNIVASLYDYNPNLAAYMKPELWQKCLGCIEELLELLFAHPEIFVGENVLEESENLSNPEQPFRVRGCVLTLVERMDEEFTKIMQNTDPHSQEYVEHLKDEARVCAIIARLQRYLQGKGSPEELCRVYLRRVLHTYYKFDYGAARRKGQVKDGAGQVKEGAGQVKEGQGKEEEKLEDEQKVKEDAQVKENEAQVKDEEEEEEDSEALMERLCRFVYAKDRTDRIRTCAILCHIYHHALHSRWYRARDLMLMSHLQDNIQHADPPVQILYNRTMVQLGICAFRQGLIKDAHNALLDIQSSGRAKELLGQGLLLRSLQERNAEQEKVEKRRQVPFHMHVNLELLECVYLVAAMLLEIPYMAAHEFDARRRMISKQFHHQLRVGERQPLLGPPESMREHVVAASKAMKTGDWRRCHRFVVNEKMNGKVWDLFPEADQVRAMLVRKIQEESLRTYLFTYSSVYDSISMETLAAMFELDLPTVHGIISKMIINEELMASLDQPTATVMMHRTEPTATQNLALQLAEKLGNLVENNERVLDQRQGAYGGYFRDQKDGGYRKGDGYLRRGGFRQERGNY
SIO_010081: LOC117010261
subclass of: SO_0000673
so part of: LOC117010261
location: join(382060..382157,382996..383061,383941..384016,386284..386397,388825..388950,389213..389264,391776..391861,393525..393649,395261..395405,397385..397488,398466..398607,401043..401168,404763..404856,408482..408842,410600..410759,413744..413959,414755..414902,417331..417490,418876..418941,420552..420639,422813..422975,424072..424151)
location: region:382060-424151:1
so has part: feature:382060-382157:1:exon
so has part: feature:382996-383061:1:exon
so has part: feature:383941-384016:1:exon
so has part: feature:386284-386397:1:exon
so has part: feature:388825-388950:1:exon
so has part: feature:389213-389264:1:exon
so has part: feature:391776-391861:1:exon
so has part: feature:393525-393649:1:exon
so has part: feature:395261-395405:1:exon
so has part: feature:397385-397488:1:exon
so has part: feature:398466-398607:1:exon
so has part: feature:401043-401168:1:exon
so has part: feature:404763-404856:1:exon
so has part: feature:408482-408842:1:exon
so has part: feature:410600-410759:1:exon
so has part: feature:413744-413959:1:exon
so has part: feature:414755-414902:1:exon
so has part: feature:417331-417490:1:exon
so has part: feature:418876-418941:1:exon
so has part: feature:420552-420639:1:exon
so has part: feature:422813-422975:1:exon
so has part: feature:424072-424151:1:exon

XP_032940445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:382060-382157:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382996-383061:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383941-384016:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:386284-386397:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:388825-388950:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389213-389264:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:391776-391861:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:393525-393649:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:395261-395405:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:397385-397488:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:398466-398607:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:401043-401168:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:404763-404856:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:408482-408842:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:410600-410759:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:413744-413959:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:414755-414902:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:417331-417490:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:418876-418941:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:420552-420639:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:422813-422975:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:424072-424151:1:exon

LOC117010256
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010256
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 424540..425689
location: region:424540-425689:1
so has part: feature:424540-425689:1:exon
subclass of: SO_0000010

117010256
type: Gene
SIO_000068: ncbigene

position:424540:1
position: 424540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425689:1
position: 425689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424540-425689:1:exon

LOC117010256
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010256
product: proline-rich protein 36-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084549.2
SIO_010081: LOC117010256
subclass of: SO_0000673
so part of: LOC117010256
location: join(424540..425413,425466..425689)
location: region:424540-425689:1
so has part: feature:424540-425413:1:exon
so has part: feature:425466-425689:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:424540-425413:1:exon

position:425413:1
position: 425413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:425466-425689:1:exon

position:425466:1
position: 425466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117010256
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010256
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich protein 36-like
translation: MFSHHFSCHGCLFSLSPHVFPPFCPLMAFFHPHPLMAASPSPPPPSSPLMAPAILSPHNFPPFSFLHGFPASCPLTVGRHFLPSRFSAIFSPHGCSSSSSSPLTASLHFVPSQFATIFPLMAAPSSSSLTGSLHFFPSQFPTIFSPHGFPSPCPFTAFLHFLPSKFATIFSPHGFLYFLLSCLPFSLSPHSSLPFSPLTIPHHFLSFMASLLPVPSQLAAILSPHDFPPFSPLMAAPSSSSLTAFLHFLPSQFATIFSPHGSLHFLSFMASLLPVPSQLAAILFPHSLPPFFPSWLPFSLSPHDFPPFCPLTVCHHFLPSRLPSILSPHNSPPFCPLRVHPMDSASF
SIO_010081: LOC117010256
subclass of: SO_0000673
so part of: LOC117010256
location: join(424569..425413,425466..425664)
location: region:424569-425664:1
so has part: feature:424569-425413:1:exon
so has part: feature:425466-425664:1:exon

XP_032940440.1
type: Protein
SIO_000068: ncbiprotein

position:424569:1
position: 424569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425664:1
position: 425664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424569-425413:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:425466-425664:1:exon

PRODH2
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: PRODH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 426306..448473
location: region:426306-448473:1
so has part: feature:426306-448473:1:exon
subclass of: SO_0000010

117010228
type: Gene
SIO_000068: ncbigene

position:426306:1
position: 426306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448473:1
position: 448473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426306-448473:1:exon

PRODH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PRODH2
product: proline dehydrogenase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 7% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_042780133.1
SIO_010081: PRODH2
subclass of: SO_0000673
so part of: PRODH2
location: join(426306..426320,427131..427280,428732..428922,431343..431463,432577..432657,432736..432816,433646..433798,437569..437684,440324..440431,441724..441800,446751..446864,448442..448473)
location: region:426306-448473:1
so has part: feature:426306-426320:1:exon
so has part: feature:427131-427280:1:exon
so has part: feature:428732-428922:1:exon
so has part: feature:431343-431463:1:exon
so has part: feature:432577-432657:1:exon
so has part: feature:432736-432816:1:exon
so has part: feature:433646-433798:1:exon
so has part: feature:437569-437684:1:exon
so has part: feature:440324-440431:1:exon
so has part: feature:441724-441800:1:exon
so has part: feature:446751-446864:1:exon
so has part: feature:448442-448473:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:426306-426320:1:exon

position:426320:1
position: 426320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:427131-427280:1:exon

position:427131:1
position: 427131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427280:1
position: 427280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:428732-428922:1:exon

position:428732:1
position: 428732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428922:1
position: 428922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:431343-431463:1:exon

position:431343:1
position: 431343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431463:1
position: 431463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:432577-432657:1:exon

position:432577:1
position: 432577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432657:1
position: 432657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:432736-432816:1:exon

position:432736:1
position: 432736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432816:1
position: 432816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:433646-433798:1:exon

position:433646:1
position: 433646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433798:1
position: 433798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:437569-437684:1:exon

position:437569:1
position: 437569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437684:1
position: 437684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:440324-440431:1:exon

position:440324:1
position: 440324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440431:1
position: 440431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:441724-441800:1:exon

position:441724:1
position: 441724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441800:1
position: 441800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:446751-446864:1:exon

position:446751:1
position: 446751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446864:1
position: 446864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:448442-448473:1:exon

position:448442:1
position: 448442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRODH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PRODH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hydroxyproline dehydrogenase
translation: MGPGQGGCEGEEESPLQVQLREGRALAALGWWELLRGLLVFALCSHPWLQQDPEAFLRASRRLLGARLWRALLSVSLWGHFAVGRSPAAIEELSRWLRARGLRPMLALPIEGEGPDGEGEAWFEQNLGAALECVGLAAASGPEPAMQLKVTALLSQRLCEKLSLRLAEPEGAGLNPEEVAAMLGGQVPELTWLSPAENQHLGRGLRRLEEVAQAAVARRVQVLVDAEMSHLNPALTCLTWGLMWRHNRGGPRAWIWNTWQAYLRDTESHLAAHLAQARRSGLPCGVKLVRGAYLEQERGRARGYGRCLELLGAALARPGPGLWLMVATHNEGSVLQALRLSPRPSPNVSFAQLQGMGESLGMELGRSPYLARRAAENRGALGGARRERELLWAELGRRLRPWRKKDNRGGVA
SIO_010081: PRODH2
subclass of: SO_0000673
so part of: PRODH2
location: join(426306..426320,427131..427280,428732..428922,431343..431463,432577..432657,432736..432816,433646..433798,437569..437684,440324..440431,441724..441800,446751..446864,448442..448473)
location: region:426306-448473:1
so has part: feature:426306-426320:1:exon
so has part: feature:427131-427280:1:exon
so has part: feature:428732-428922:1:exon
so has part: feature:431343-431463:1:exon
so has part: feature:432577-432657:1:exon
so has part: feature:432736-432816:1:exon
so has part: feature:433646-433798:1:exon
so has part: feature:437569-437684:1:exon
so has part: feature:440324-440431:1:exon
so has part: feature:441724-441800:1:exon
so has part: feature:446751-446864:1:exon
so has part: feature:448442-448473:1:exon

XP_042636067.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:426306-426320:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:427131-427280:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:428732-428922:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:431343-431463:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:432577-432657:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:432736-432816:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:433646-433798:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:437569-437684:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:440324-440431:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:441724-441800:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:446751-446864:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:448442-448473:1:exon

MAZ
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: MAZ
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 450510..456429
location: region:450510-456429:1
so has part: feature:450510-456429:1:exon
subclass of: SO_0000010

117010229
type: Gene
SIO_000068: ncbigene

position:450510:1
position: 450510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456429:1
position: 456429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450510-456429:1:exon

MAZ
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: MAZ
product: MYC associated zinc finger protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084522.1
SIO_010081: MAZ
subclass of: SO_0000673
so part of: MAZ
location: join(450510..451023,453630..453693,455099..455290,456418..456429)
location: region:450510-456429:1
so has part: feature:450510-451023:1:exon
so has part: feature:453630-453693:1:exon
so has part: feature:455099-455290:1:exon
so has part: feature:456418-456429:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:450510-451023:1:exon

position:451023:1
position: 451023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:453630-453693:1:exon

position:453630:1
position: 453630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453693:1
position: 453693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:455099-455290:1:exon

position:455099:1
position: 455099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455290:1
position: 455290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:456418-456429:1:exon

position:456418:1
position: 456418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAZ
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: MAZ
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myc-associated zinc finger protein
translation: MTSEAPPPVTSSSPPRKPKGAPYVCGLCAKEFKNGYNLRRHQATHGVAGAAKRPPRPSPTPTPLPHDTDGADAAAAAATPKRAAPRKSHACDTCGKAFRDVYHLKRHRLSHTDERPFQCPVCQQRFKRKDRMASHVRSHQGHVHKPYACGHCGKSFSRPDHLNSHVRQVHSTERPFKCQRCEAAFATRDRLRAHAARHQDKAPCQVCGKLLSPAHLGEHLRGHAQPGPAPTHPGQQGQQGQGAIDP
SIO_010081: MAZ
subclass of: SO_0000673
so part of: MAZ
location: join(450551..451023,453630..453693,455099..455290,456418..456429)
location: region:450551-456429:1
so has part: feature:450551-451023:1:exon
so has part: feature:453630-453693:1:exon
so has part: feature:455099-455290:1:exon
so has part: feature:456418-456429:1:exon

XP_032940413.1
type: Protein
SIO_000068: ncbiprotein

position:450551:1
position: 450551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450551-451023:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:453630-453693:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:455099-455290:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:456418-456429:1:exon

INO80E
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: INO80E
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(457149..459576)
location: region:457149-459576:-1
so has part: feature:457149-459576:-1:exon
subclass of: SO_0000010

117010230
type: Gene
SIO_000068: ncbigene

position:457149:-1
position: 457149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459576:-1
position: 459576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457149-459576:-1:exon

INO80E
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: INO80E
product: INO80 complex subunit E
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084523.1
SIO_010081: INO80E
subclass of: SO_0000673
so part of: INO80E
location: complement(join(457149..457178,457237..457288,458299..458374,458468..458520,458645..458715,459446..459576))
location: region:457149-459576:-1
so has part: feature:459446-459576:-1:exon
so has part: feature:458645-458715:-1:exon
so has part: feature:458468-458520:-1:exon
so has part: feature:458299-458374:-1:exon
so has part: feature:457237-457288:-1:exon
so has part: feature:457149-457178:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:459446-459576:-1:exon

position:459446:-1
position: 459446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:458645-458715:-1:exon

position:458645:-1
position: 458645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458715:-1
position: 458715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:458468-458520:-1:exon

position:458468:-1
position: 458468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458520:-1
position: 458520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:458299-458374:-1:exon

position:458299:-1
position: 458299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458374:-1
position: 458374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:457237-457288:-1:exon

position:457237:-1
position: 457237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457288:-1
position: 457288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:457149-457178:-1:exon

position:457178:-1
position: 457178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

INO80E
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: INO80E
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: INO80 complex subunit E
translation: MNGASEGDGGGYKRRCRALKRRLKLLLYEQECFQEELRRAQRKLLKVSRDKSFLLDRLLQYENVDDDSSDSEATASSDNSDGDGAKGAEPTPAKRRRSPSPPPPAFAPSPYMIRGRGLTSG
SIO_010081: INO80E
subclass of: SO_0000673
so part of: INO80E
location: complement(join(457149..457178,457237..457288,458299..458374,458468..458520,458645..458715,459446..459529))
location: region:457149-459529:-1
so has part: feature:459446-459529:-1:exon
so has part: feature:458645-458715:-1:exon
so has part: feature:458468-458520:-1:exon
so has part: feature:458299-458374:-1:exon
so has part: feature:457237-457288:-1:exon
so has part: feature:457149-457178:-1:exon

XP_032940414.1
type: Protein
SIO_000068: ncbiprotein

position:459529:-1
position: 459529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459446-459529:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458645-458715:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:458468-458520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:458299-458374:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:457237-457288:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:457149-457178:-1:exon

PAGR1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: PAGR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(471898..482792)
location: region:471898-482792:-1
so has part: feature:471898-482792:-1:exon
subclass of: SO_0000010

117010269
type: Gene
SIO_000068: ncbigene

position:471898:-1
position: 471898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482792:-1
position: 482792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471898-482792:-1:exon

PAGR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PAGR1
product: PAXIP1 associated glutamate rich protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_033084562.1
SIO_010081: PAGR1
subclass of: SO_0000673
so part of: PAGR1
location: complement(join(471898..472136,475264..475346,481550..481696,482624..482792))
location: region:471898-482792:-1
so has part: feature:482624-482792:-1:exon
so has part: feature:481550-481696:-1:exon
so has part: feature:475264-475346:-1:exon
so has part: feature:471898-472136:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:482624-482792:-1:exon

position:482624:-1
position: 482624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:481550-481696:-1:exon

position:481550:-1
position: 481550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481696:-1
position: 481696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:475264-475346:-1:exon

position:475264:-1
position: 475264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475346:-1
position: 475346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:471898-472136:-1:exon

position:472136:-1
position: 472136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PAGR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PAGR1
product: PAXIP1 associated glutamate rich protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033084560.1
SIO_010081: PAGR1
subclass of: SO_0000673
so part of: PAGR1
location: complement(join(471899..472136,475264..475346,478079..478128,482527..482792))
location: region:471899-482792:-1
so has part: feature:482527-482792:-1:exon
so has part: feature:478079-478128:-1:exon
so has part: feature:475264-475346:-1:exon
so has part: feature:471899-472136:-1:exon

position:471899:-1
position: 471899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482527-482792:-1:exon

position:482527:-1
position: 482527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:478079-478128:-1:exon

position:478079:-1
position: 478079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478128:-1
position: 478128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:475264-475346:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:471899-472136:-1:exon

PAGR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PAGR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PAXIP1-associated glutamate-rich protein 1 isoform X2
translation: MMIGESPGVRKRRKELNPREDGSQKPSEILRLYEAIGRAGVLPLRNVPFPRREPSPDPPCELQEQGEQGTGNGDEEEEEKPPPPTEFDFDDDPVAPNPSLIDRRRAPGPPNRGQKREARLDKVLSDMKRHKKLEEQILRTGQDLFPAENEESQTSKRTPGFFLRQRKY
SIO_010081: PAGR1
subclass of: SO_0000673
so part of: PAGR1
location: complement(join(471952..472136,475264..475346,481550..481696,482624..482715))
location: region:471952-482715:-1
so has part: feature:482624-482715:-1:exon
so has part: feature:481550-481696:-1:exon
so has part: feature:475264-475346:-1:exon
so has part: feature:471952-472136:-1:exon

XP_032940453.1
type: Protein
SIO_000068: ncbiprotein

position:471952:-1
position: 471952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482715:-1
position: 482715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482624-482715:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:481550-481696:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:475264-475346:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:471952-472136:-1:exon

PAGR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PAGR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PAXIP1-associated glutamate-rich protein 1 isoform X1
translation: MMIGESPGVRKRRKELNPREDGSQKPSEILRLYEAIARAGVLPLRNVPFPRREPSPDPPCELQDEEKVGAGNGDEEEEEKPPPPTEFDFDDDPVAPNPSLIDRRRAPGPPNRGQKREARLDKVLSDMKRHKKLEEQILRTGQDLFPAENEESQTSKRTPGFFLRQRKY
SIO_010081: PAGR1
subclass of: SO_0000673
so part of: PAGR1
location: complement(join(471952..472136,475264..475346,478079..478128,482527..482715))
location: region:471952-482715:-1
so has part: feature:482527-482715:-1:exon
so has part: feature:478079-478128:-1:exon
so has part: feature:475264-475346:-1:exon
so has part: feature:471952-472136:-1:exon

XP_032940451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:482527-482715:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:478079-478128:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:475264-475346:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:471952-472136:-1:exon

VKORC1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: VKORC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 484789..489144
location: region:484789-489144:1
so has part: feature:484789-489144:1:exon
subclass of: SO_0000010

117010270
type: Gene
SIO_000068: ncbigene

position:484789:1
position: 484789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489144:1
position: 489144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484789-489144:1:exon

VKORC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: VKORC1
product: vitamin K epoxide reductase complex subunit 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084563.1
SIO_010081: VKORC1
subclass of: SO_0000673
so part of: VKORC1
location: join(484789..484961,485518..485627,486702..486912,489049..489144)
location: region:484789-489144:1
so has part: feature:484789-484961:1:exon
so has part: feature:485518-485627:1:exon
so has part: feature:486702-486912:1:exon
so has part: feature:489049-489144:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:484789-484961:1:exon

position:484961:1
position: 484961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:485518-485627:1:exon

position:485518:1
position: 485518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485627:1
position: 485627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:486702-486912:1:exon

position:486702:1
position: 486702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486912:1
position: 486912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:489049-489144:1:exon

position:489049:1
position: 489049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VKORC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: VKORC1
product: vitamin K epoxide reductase complex subunit 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033084564.1
SIO_010081: VKORC1
subclass of: SO_0000673
so part of: VKORC1
location: join(484789..484961,485518..485627,486702..486913,486976..486999)
location: region:484789-486999:1
so has part: feature:484789-484961:1:exon
so has part: feature:485518-485627:1:exon
so has part: feature:486702-486913:1:exon
so has part: feature:486976-486999:1:exon

position:486999:1
position: 486999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484789-484961:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:485518-485627:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:486702-486913:1:exon

position:486913:1
position: 486913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:486976-486999:1:exon

position:486976:1
position: 486976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VKORC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: VKORC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vitamin K epoxide reductase complex subunit 1
translation: MAALAWRAALCLAGAALSLYALHVEHNAARDPSYRAACDLAPSVSCTRVFSSRWGRGLGLVEPVLGKDSAVNVPNGAVGLLFYLLQGLLGLSRSRLASVALLGTSVASALASLWLAAVLAFGLRDLCLVCVSTYGVNLALLALNLRQRRGETGKKRD
SIO_010081: VKORC1
subclass of: SO_0000673
so part of: VKORC1
location: join(484804..484961,485518..485627,486702..486907)
location: region:484804-486907:1
so has part: feature:484804-484961:1:exon
so has part: feature:485518-485627:1:exon
so has part: feature:486702-486907:1:exon

XP_032940454.1
type: Protein
SIO_000068: ncbiprotein

position:484804:1
position: 484804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486907:1
position: 486907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484804-484961:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:485518-485627:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:486702-486907:1:exon

VKORC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: VKORC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vitamin K epoxide reductase complex subunit 1
translation: MAALAWRAALCLAGAALSLYALHVEHNAARDPSYRAACDLAPSVSCTRVFSSRWGRGLGLVEPVLGKDSAVNVPNGAVGLLFYLLQGLLGLSRSRLASVALLGTSVASALASLWLAAVLAFGLRDLCLVCVSTYGVNLALLALNLRQRRGETGKKRD
SIO_010081: VKORC1
subclass of: SO_0000673
so part of: VKORC1
location: join(484804..484961,485518..485627,486702..486907)
location: region:484804-486907:1
so has part: feature:484804-484961:1:exon
so has part: feature:485518-485627:1:exon
so has part: feature:486702-486907:1:exon

XP_032940455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:484804-484961:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:485518-485627:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:486702-486907:1:exon

LOC117010266
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010266
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 489696..490436
location: region:489696-490436:1
so has part: feature:489696-490436:1:exon
subclass of: SO_0000011

117010266
type: Gene
SIO_000068: ncbigene

position:489696:1
position: 489696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490436:1
position: 490436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489696-490436:1:exon

LOC117010266
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117010266
product: uncharacterized LOC117010266
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004420599.1
SIO_010081: LOC117010266
subclass of: SO_0000673
so part of: LOC117010266
location: join(489696..489968,490162..490201,490324..490436)
location: region:489696-490436:1
so has part: feature:489696-489968:1:exon
so has part: feature:490162-490201:1:exon
so has part: feature:490324-490436:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:489696-489968:1:exon

position:489968:1
position: 489968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:490162-490201:1:exon

position:490162:1
position: 490162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490201:1
position: 490201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:490324-490436:1:exon

position:490324:1
position: 490324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BCKDK
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: BCKDK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(492578..517611)
location: region:492578-517611:-1
so has part: feature:492578-517611:-1:exon
subclass of: SO_0000010

117010264
type: Gene
SIO_000068: ncbigene

position:492578:-1
position: 492578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517611:-1
position: 517611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492578-517611:-1:exon

BCKDK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: BCKDK
product: branched chain keto acid dehydrogenase kinase
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033084558.2
SIO_010081: BCKDK
subclass of: SO_0000673
so part of: BCKDK
location: complement(join(492578..492819,495655..495811,499216..499305,500538..500666,504225..504298,504397..504495,505638..505757,507572..507619,508800..508910,513922..513990,517438..517611))
location: region:492578-517611:-1
so has part: feature:517438-517611:-1:exon
so has part: feature:513922-513990:-1:exon
so has part: feature:508800-508910:-1:exon
so has part: feature:507572-507619:-1:exon
so has part: feature:505638-505757:-1:exon
so has part: feature:504397-504495:-1:exon
so has part: feature:504225-504298:-1:exon
so has part: feature:500538-500666:-1:exon
so has part: feature:499216-499305:-1:exon
so has part: feature:495655-495811:-1:exon
so has part: feature:492578-492819:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:517438-517611:-1:exon

position:517438:-1
position: 517438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:513922-513990:-1:exon

position:513922:-1
position: 513922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513990:-1
position: 513990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:508800-508910:-1:exon

position:508800:-1
position: 508800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508910:-1
position: 508910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:507572-507619:-1:exon

position:507572:-1
position: 507572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507619:-1
position: 507619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:505638-505757:-1:exon

position:505638:-1
position: 505638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505757:-1
position: 505757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:504397-504495:-1:exon

position:504397:-1
position: 504397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504495:-1
position: 504495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:504225-504298:-1:exon

position:504225:-1
position: 504225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504298:-1
position: 504298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:500538-500666:-1:exon

position:500538:-1
position: 500538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500666:-1
position: 500666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:499216-499305:-1:exon

position:499216:-1
position: 499216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499305:-1
position: 499305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:495655-495811:-1:exon

position:495655:-1
position: 495655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:495811:-1
position: 495811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:492578-492819:-1:exon

position:492819:-1
position: 492819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BCKDK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: BCKDK
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: 3-methyl-2-oxobutanoate dehydrogenase [lipoamide] kinase, mitochondrial
translation: MLRRVLGGGLRGGGGAAGTPRAPARAAADQTPADLARERCKAVTSFYHQPAIDAAAERPSVRLTPTTMLYSGRSQDGSHILKSARYLQQELPVRIAHRIKGFRNLPFIIGCNPTILHVHELYIRAFQKLSDFPPIQVRSDESQYCALLRQLLEDHKDVVTLLAEGLRECRRHIQDERFLRPFLDKTLTSRLGMRMLAAHHLALHEDKPDFVGIICTRLSPKKLIEKWVDFARRLCEHQYGNAPRVRINGHVAARFPFIPLPLDYVLPELLKNAMRATMESHLDTPYNVPDIVVTIANNDIDLVIRISDRGGGIPHELLDKVTEYHFSTAEASAQDPRLGGPFRGLMDASGQAGPMHGFGFGLPTSRAYAEYLGGSLVLQSLQGVGTDVYLRLRHIDGKAESFRI
SIO_010081: BCKDK
subclass of: SO_0000673
so part of: BCKDK
location: complement(join(492675..492819,495655..495811,499216..499305,500538..500666,504225..504298,504397..504495,505638..505757,507572..507619,508800..508910,513922..513990,517438..517611))
location: region:492675-517611:-1
so has part: feature:517438-517611:-1:exon
so has part: feature:513922-513990:-1:exon
so has part: feature:508800-508910:-1:exon
so has part: feature:507572-507619:-1:exon
so has part: feature:505638-505757:-1:exon
so has part: feature:504397-504495:-1:exon
so has part: feature:504225-504298:-1:exon
so has part: feature:500538-500666:-1:exon
so has part: feature:499216-499305:-1:exon
so has part: feature:495655-495811:-1:exon
so has part: feature:492675-492819:-1:exon

XP_032940449.1
type: Protein
SIO_000068: ncbiprotein

position:492675:-1
position: 492675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517438-517611:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:513922-513990:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:508800-508910:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:507572-507619:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:505638-505757:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:504397-504495:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:504225-504298:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:500538-500666:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:499216-499305:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:495655-495811:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:492675-492819:-1:exon

LOC117010214
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010214
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(522607..527783)
location: region:522607-527783:-1
so has part: feature:522607-527783:-1:exon
subclass of: SO_0000011

117010214
type: Gene
SIO_000068: ncbigene

position:522607:-1
position: 522607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527783:-1
position: 527783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:522607-527783:-1:exon

LOC117010214
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117010214
product: uncharacterized LOC117010214
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XR_004420589.1
SIO_010081: LOC117010214
subclass of: SO_0000673
so part of: LOC117010214
location: complement(join(522607..522649,524315..524336,525407..525460,526266..526303,527518..527783))
location: region:522607-527783:-1
so has part: feature:527518-527783:-1:exon
so has part: feature:526266-526303:-1:exon
so has part: feature:525407-525460:-1:exon
so has part: feature:524315-524336:-1:exon
so has part: feature:522607-522649:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:527518-527783:-1:exon

position:527518:-1
position: 527518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:526266-526303:-1:exon

position:526266:-1
position: 526266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526303:-1
position: 526303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:525407-525460:-1:exon

position:525407:-1
position: 525407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525460:-1
position: 525460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:524315-524336:-1:exon

position:524315:-1
position: 524315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524336:-1
position: 524336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:522607-522649:-1:exon

position:522649:-1
position: 522649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SRRM2
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: SRRM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(531334..546755)
location: region:531334-546755:-1
so has part: feature:531334-546755:-1:exon
subclass of: SO_0000010

117010231
type: Gene
SIO_000068: ncbigene

position:531334:-1
position: 531334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546755:-1
position: 546755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531334-546755:-1:exon

SRRM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SRRM2
product: serine/arginine repetitive matrix 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 56% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084524.1
SIO_010081: SRRM2
subclass of: SO_0000673
so part of: SRRM2
location: complement(join(531334..531576,531820..532235,532872..533680,533811..534491,534533..535468,535841..535955,536051..536131,536212..536262,536371..536403,537224..537274,538235..538312,539440..539604,541109..541204,542569..542821,546625..546755))
location: region:531334-546755:-1
so has part: feature:546625-546755:-1:exon
so has part: feature:542569-542821:-1:exon
so has part: feature:541109-541204:-1:exon
so has part: feature:539440-539604:-1:exon
so has part: feature:538235-538312:-1:exon
so has part: feature:537224-537274:-1:exon
so has part: feature:536371-536403:-1:exon
so has part: feature:536212-536262:-1:exon
so has part: feature:536051-536131:-1:exon
so has part: feature:535841-535955:-1:exon
so has part: feature:534533-535468:-1:exon
so has part: feature:533811-534491:-1:exon
so has part: feature:532872-533680:-1:exon
so has part: feature:531820-532235:-1:exon
so has part: feature:531334-531576:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:546625-546755:-1:exon

position:546625:-1
position: 546625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:542569-542821:-1:exon

position:542569:-1
position: 542569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542821:-1
position: 542821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:541109-541204:-1:exon

position:541109:-1
position: 541109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541204:-1
position: 541204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:539440-539604:-1:exon

position:539440:-1
position: 539440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:539604:-1
position: 539604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:538235-538312:-1:exon

position:538235:-1
position: 538235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538312:-1
position: 538312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:537224-537274:-1:exon

position:537224:-1
position: 537224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537274:-1
position: 537274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:536371-536403:-1:exon

position:536371:-1
position: 536371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536403:-1
position: 536403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:536212-536262:-1:exon

position:536212:-1
position: 536212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536262:-1
position: 536262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:536051-536131:-1:exon

position:536051:-1
position: 536051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536131:-1
position: 536131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:535841-535955:-1:exon

position:535841:-1
position: 535841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535955:-1
position: 535955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:534533-535468:-1:exon

position:534533:-1
position: 534533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535468:-1
position: 535468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:533811-534491:-1:exon

position:533811:-1
position: 533811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534491:-1
position: 534491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:532872-533680:-1:exon

position:532872:-1
position: 532872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533680:-1
position: 533680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:531820-532235:-1:exon

position:531820:-1
position: 531820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532235:-1
position: 532235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:531334-531576:-1:exon

position:531576:-1
position: 531576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SRRM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SRRM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine repetitive matrix protein 2
translation: MYNGIGLPTPRGSGTNGYVQRNLSALRPKKGGAGGDPPPGQEELRRLEAALAKKPNPDILDHQRKRRVELKCLELAELMEEQGYSAEEIEAKVATFRTMLLEKDEGPGEPEHKPTATETHQLAEANERKNERLRAAFGISDAYVDGSAFDPGRRGKEGKEAPPEPPEPPSAVAEPSSSRSPSPKQKKKKKKKDRGRSASRSGERKKSKKKKHRSESEAKKRKHRSPSPKAKHKAKEKKRKRSTSQSQKPERSSSPAGSSSSSGSSRSRSRSATAPTPTPAPPPRREEEEPAPPSASPAAAAPPPPQRRGPRASRHRSRSRPRSRRRSRSRPRRRSRSRTPLWTPNATSPLRWPGVAGVTAPLTLGAAANTTSSSARSRSRSRPRRRSRSRRRSRSRRWGRSRSRSRSRRRSRSPIRRSRSPIRRSRSPIRRSRSPIRRSRSPIRRSRSPIRRSRSRRRSRSRRRSRSRRRSRSAPRRSRSRRRSRSLSPSPDRRRHRRGGTRRSRSESSGKSRGRGGRRSRSLSSPLPKKRARARSRSASPRRRRGRSDSPSPTPPARAVPHPSPASNFSPAPLRCHRCPLPRPRPRPAQVGPAGRAAPGGAAGGDTGGDTGGGGGVQPAPPGTEGATKGAEGATRATPEGTTVAGSEEKPPAVAEGTAAAAATKTSPGMAGSSDNKMAASENKMAASDNKMVASDNKMAGSDKKMAASDNKMVASDNKMAAGENKMAASDNKMATGENKMAAGENKMAAGENKMAAGDNKMAASENKMAASENKMAASENKMAASDNKMAASDSKPAVNGTRVPAGDTKATPGDTKATAGDTKPPPSPSPPVPKALSPNVPKVETPNPPPSLSPNRPQRRPPTPNPPHPPRAAPAPAPAVTALGDLGTPPPATPGAAAGAGAVPCRRRWHLGDVGGHCCRRRASRCRPRPVAASALPPVSLVTKATPARLGAPRRRHQDVPKGGGVVTKAPPEVKAVPKATVGTAKATNVTVGVALTDSKVTNVAGVTDSKATPGVTAATPGVPKATPGVPRAVPAGVSPLGAAILRASADATAKATAMAAKATSMTSNTSMSSNTSMSGATSATSNAAAVTKATSAPSLTSAGKATAPSVTSAPSVTSTSVAAAPSITSAPSITSAATQSGSSVTSATNAAAPSAPSITSTGMAAAPGITSAPSMTSAATQSAPSAPSITSAAPQSVPSVTSAPSITSTIMAAVPSATSAPSITSTAMAVAPSVTSAPSITMAAAPSAPSSTSTTTAAAPSSTSTDAVPMDTSAPSAPSAPSTAAVPKSSSSSSSSSSSSSSSSSSSSDSDSDSSSSSSDSAPPSPAPPTG
SIO_010081: SRRM2
subclass of: SO_0000673
so part of: SRRM2
location: complement(join(531335..531576,531820..532235,532872..533680,533811..534491,534533..535468,535841..535955,536051..536131,536212..536262,536371..536403,537224..537274,538235..538312,539440..539604,541109..541204,542569..542816))
location: region:531335-542816:-1
so has part: feature:542569-542816:-1:exon
so has part: feature:541109-541204:-1:exon
so has part: feature:539440-539604:-1:exon
so has part: feature:538235-538312:-1:exon
so has part: feature:537224-537274:-1:exon
so has part: feature:536371-536403:-1:exon
so has part: feature:536212-536262:-1:exon
so has part: feature:536051-536131:-1:exon
so has part: feature:535841-535955:-1:exon
so has part: feature:534533-535468:-1:exon
so has part: feature:533811-534491:-1:exon
so has part: feature:532872-533680:-1:exon
so has part: feature:531820-532235:-1:exon
so has part: feature:531335-531576:-1:exon

XP_032940415.1
type: Protein
SIO_000068: ncbiprotein

position:531335:-1
position: 531335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542816:-1
position: 542816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:542569-542816:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:541109-541204:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:539440-539604:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:538235-538312:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:537224-537274:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:536371-536403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:536212-536262:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:536051-536131:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:535841-535955:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534533-535468:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:533811-534491:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:532872-533680:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:531820-532235:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:531335-531576:-1:exon

LOC117010253
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010253
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 548305..556427
location: region:548305-556427:1
so has part: feature:548305-556427:1:exon
subclass of: SO_0000010

117010253
type: Gene
SIO_000068: ncbigene

position:548305:1
position: 548305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556427:1
position: 556427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548305-556427:1:exon

LOC117010253
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010253
product: microfibril-associated glycoprotein 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033084547.1
SIO_010081: LOC117010253
subclass of: SO_0000673
so part of: LOC117010253
location: join(548305..548322,550477..550549,551493..551656,552310..552406,553799..553981,556124..556427)
location: region:548305-556427:1
so has part: feature:548305-548322:1:exon
so has part: feature:550477-550549:1:exon
so has part: feature:551493-551656:1:exon
so has part: feature:552310-552406:1:exon
so has part: feature:553799-553981:1:exon
so has part: feature:556124-556427:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:548305-548322:1:exon

position:548322:1
position: 548322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:550477-550549:1:exon

position:550477:1
position: 550477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550549:1
position: 550549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:551493-551656:1:exon

position:551493:1
position: 551493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551656:1
position: 551656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:552310-552406:1:exon

position:552310:1
position: 552310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552406:1
position: 552406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:553799-553981:1:exon

position:553799:1
position: 553799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553981:1
position: 553981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:556124-556427:1:exon

position:556124:1
position: 556124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117010253
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010253
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microfibril-associated glycoprotein 4-like
translation: MEFVAVALLVALGTLGQGQGQPIGPQALPLCPPLPPRDCQDVHAGGARADGVYLVSPAGGGAPPVPVYCDMSTEGARLDGTVFQKRFNGSVSFFRGWNDYRAGFGRADGEYWLGLQTLALLTLQARYELRVELEDFENNSAAATYGSFALSPTAISAEEDGYALHVAGFVDGGAGDSLSYHNGQKFSTFDRDQDLFAQNCAALSSGAWWFRSCHFSNLNGFYLAGPHLSYANGINWAQWKGFYYSLKRSEMKIRRL
SIO_010081: LOC117010253
subclass of: SO_0000673
so part of: LOC117010253
location: join(548317..548322,550477..550549,551493..551656,552310..552406,553799..553981,556124..556371)
location: region:548317-556371:1
so has part: feature:548317-548322:1:exon
so has part: feature:550477-550549:1:exon
so has part: feature:551493-551656:1:exon
so has part: feature:552310-552406:1:exon
so has part: feature:553799-553981:1:exon
so has part: feature:556124-556371:1:exon

XP_032940438.1
type: Protein
SIO_000068: ncbiprotein

position:548317:1
position: 548317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556371:1
position: 556371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548317-548322:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:550477-550549:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551493-551656:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552310-552406:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:553799-553981:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:556124-556371:1:exon

LOC117010232
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010232
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 560589..563577
location: region:560589-563577:1
so has part: feature:560589-563577:1:exon
subclass of: SO_0000010

117010232
type: Gene
SIO_000068: ncbigene

position:560589:1
position: 560589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563577:1
position: 563577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:560589-563577:1:exon

LOC117010232
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010232
product: S-antigen protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 62% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084525.1
SIO_010081: LOC117010232
subclass of: SO_0000673
so part of: LOC117010232
location: join(560589..561085,562526..563044,563420..563577)
location: region:560589-563577:1
so has part: feature:560589-561085:1:exon
so has part: feature:562526-563044:1:exon
so has part: feature:563420-563577:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:560589-561085:1:exon

position:561085:1
position: 561085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:562526-563044:1:exon

position:562526:1
position: 562526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563044:1
position: 563044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:563420-563577:1:exon

position:563420:1
position: 563420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117010232
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010232
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: S-antigen protein-like
translation: MSSLERVQSGGRSLDRRLDAVPAEALLAELRAAGAVSETEAAALGRPGGSGWARRLRALAVARGDHSCRVLLTVLERLEGPPRPGPFDFYDPQRDAAALHRSDCPCCRPEPGPEPGPEWTREEEEGEPGNGDEGHEDDDGEPKTGEEGHEEEEGDDEGHDDDDDDDDDEGGDEGPEGDEGDEGHEDDEGEPKNEDEGQEDDDDGGDEGPNDDGEDGGGDEGPEEDDGDEGGGDEGPEEDDGGDEGPDDDEGGDEGPGDDGELWVSMRMKMVMMMKMKNFGSKKTQSGFFDRDDDEDEGDEGPSDGDDGGDED
SIO_010081: LOC117010232
subclass of: SO_0000673
so part of: LOC117010232
location: join(560824..561085,562526..563044,563420..563577)
location: region:560824-563577:1
so has part: feature:560824-561085:1:exon
so has part: feature:562526-563044:1:exon
so has part: feature:563420-563577:1:exon

XP_032940416.1
type: Protein
SIO_000068: ncbiprotein

position:560824:1
position: 560824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:560824-561085:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:562526-563044:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:563420-563577:1:exon

ELOB
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: ELOB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(564711..572628)
location: region:564711-572628:-1
so has part: feature:564711-572628:-1:exon
subclass of: SO_0000010

117010251
type: Gene
SIO_000068: ncbigene

position:564711:-1
position: 564711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572628:-1
position: 572628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:564711-572628:-1:exon

ELOB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ELOB
product: elongin B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033084545.1
SIO_010081: ELOB
subclass of: SO_0000673
so part of: ELOB
location: complement(join(564711..564887,567875..567983,569817..569951,572554..572628))
location: region:564711-572628:-1
so has part: feature:572554-572628:-1:exon
so has part: feature:569817-569951:-1:exon
so has part: feature:567875-567983:-1:exon
so has part: feature:564711-564887:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:572554-572628:-1:exon

position:572554:-1
position: 572554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:569817-569951:-1:exon

position:569817:-1
position: 569817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569951:-1
position: 569951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:567875-567983:-1:exon

position:567875:-1
position: 567875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567983:-1
position: 567983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:564711-564887:-1:exon

position:564887:-1
position: 564887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ELOB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ELOB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elongin-B
translation: MDVFLMIRRHKTTIFTEAKESSTVLELKRIVQGILHRPPEEQRLYKDDQLLEDSKTLGDCGFTSQTARPQAPATVGLALRNGEESFEGLRIEPFSSPPELPDVMKPQDSSGAATDPPLP
SIO_010081: ELOB
subclass of: SO_0000673
so part of: ELOB
location: complement(join(564775..564887,567875..567983,569817..569951,572554..572556))
location: region:564775-572556:-1
so has part: feature:572554-572556:-1:exon
so has part: feature:569817-569951:-1:exon
so has part: feature:567875-567983:-1:exon
so has part: feature:564775-564887:-1:exon

XP_032940436.1
type: Protein
SIO_000068: ncbiprotein

position:564775:-1
position: 564775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572556:-1
position: 572556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:572554-572556:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:569817-569951:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:567875-567983:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:564775-564887:-1:exon

LOC117010233
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010233
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 573335..590222
location: region:573335-590222:1
so has part: feature:573335-590222:1:exon
subclass of: SO_0000010

117010233
type: Gene
SIO_000068: ncbigene

position:573335:1
position: 573335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:590222:1
position: 590222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:573335-590222:1:exon

LOC117010233
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010233
product: serine protease 33-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084526.1
SIO_010081: LOC117010233
subclass of: SO_0000673
so part of: LOC117010233
location: join(573335..573511,574569..574601,576678..576846,578523..578650,579060..579085,580179..580339,583595..583884,588316..588476,589947..590222)
location: region:573335-590222:1
so has part: feature:573335-573511:1:exon
so has part: feature:574569-574601:1:exon
so has part: feature:576678-576846:1:exon
so has part: feature:578523-578650:1:exon
so has part: feature:579060-579085:1:exon
so has part: feature:580179-580339:1:exon
so has part: feature:583595-583884:1:exon
so has part: feature:588316-588476:1:exon
so has part: feature:589947-590222:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:573335-573511:1:exon

position:573511:1
position: 573511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:574569-574601:1:exon

position:574569:1
position: 574569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574601:1
position: 574601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:576678-576846:1:exon

position:576678:1
position: 576678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576846:1
position: 576846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:578523-578650:1:exon

position:578523:1
position: 578523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578650:1
position: 578650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:579060-579085:1:exon

position:579060:1
position: 579060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579085:1
position: 579085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:580179-580339:1:exon

position:580179:1
position: 580179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:580339:1
position: 580339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:583595-583884:1:exon

position:583595:1
position: 583595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583884:1
position: 583884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:588316-588476:1:exon

position:588316:1
position: 588316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:588476:1
position: 588476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:589947-590222:1:exon

position:589947:1
position: 589947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117010233
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010233
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine protease 33-like
translation: MGTPRVLLPLPPLLLLSALGCDVTPGDPPSGGSRELSETELGCGLPRPLPQPRSVGGSEAGEGRWPWQGSLRRGGSHVCGVSLVAPQWVLTAAHCLQGSSDPRLFSVLLGTAELDRGGEGRGGGGAGVSIPLSLLLPHPHVTPPPSMTSLPRPLPQPRSVGGSEAGEGRWPWQGSLRRGGSHVCGVSLVAPQWVLTAAHCLQGSSDPRLFSVLLGTAELDRGGEGRGGGGAGVSIPLSLLLPHPSYAGEATSGDLALARLARPVRFGPGLGPVCLPSPTLRFPPGTRCVSTGWGEVRPGESPRRLRQLEVPLLPLGLCRRLYGTDLGPALPPRPIQPDMLCAGHPEGGKDTCKGDSGGPLVCPSSGRWVLAGIVSWGEGCGVPQRPGVYTRVSAFSDWIAARAGGVAFVSPRPRNGAPWRVGGLAVAVVSVVVSAVVSAGVSLG
SIO_010081: LOC117010233
subclass of: SO_0000673
so part of: LOC117010233
location: join(573421..573511,574569..574601,576678..576846,578523..578650,579060..579085,580179..580339,583595..583884,588316..588476,589947..590222)
location: region:573421-590222:1
so has part: feature:573421-573511:1:exon
so has part: feature:574569-574601:1:exon
so has part: feature:576678-576846:1:exon
so has part: feature:578523-578650:1:exon
so has part: feature:579060-579085:1:exon
so has part: feature:580179-580339:1:exon
so has part: feature:583595-583884:1:exon
so has part: feature:588316-588476:1:exon
so has part: feature:589947-590222:1:exon

XP_032940417.1
type: Protein
SIO_000068: ncbiprotein

position:573421:1
position: 573421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:573421-573511:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:574569-574601:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:576678-576846:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:578523-578650:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:579060-579085:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:580179-580339:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:583595-583884:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:588316-588476:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:589947-590222:1:exon

KAT8
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: KAT8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(593882..615563)
location: region:593882-615563:-1
so has part: feature:593882-615563:-1:exon
subclass of: SO_0000010

117010235
type: Gene
SIO_000068: ncbigene

position:593882:-1
position: 593882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615563:-1
position: 615563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:593882-615563:-1:exon

KAT8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: KAT8
product: lysine acetyltransferase 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084527.1
SIO_010081: KAT8
subclass of: SO_0000673
so part of: KAT8
location: complement(join(593882..594012,595791..595945,600537..600687,603582..603675,607069..607209,609316..609405,610954..611118,612246..612299,613472..613644,614168..614242,615338..615432,615511..615563))
location: region:593882-615563:-1
so has part: feature:615511-615563:-1:exon
so has part: feature:615338-615432:-1:exon
so has part: feature:614168-614242:-1:exon
so has part: feature:613472-613644:-1:exon
so has part: feature:612246-612299:-1:exon
so has part: feature:610954-611118:-1:exon
so has part: feature:609316-609405:-1:exon
so has part: feature:607069-607209:-1:exon
so has part: feature:603582-603675:-1:exon
so has part: feature:600537-600687:-1:exon
so has part: feature:595791-595945:-1:exon
so has part: feature:593882-594012:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:615511-615563:-1:exon

position:615511:-1
position: 615511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:615338-615432:-1:exon

position:615338:-1
position: 615338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615432:-1
position: 615432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:614168-614242:-1:exon

position:614168:-1
position: 614168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614242:-1
position: 614242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:613472-613644:-1:exon

position:613472:-1
position: 613472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:613644:-1
position: 613644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:612246-612299:-1:exon

position:612246:-1
position: 612246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612299:-1
position: 612299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:610954-611118:-1:exon

position:610954:-1
position: 610954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611118:-1
position: 611118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:609316-609405:-1:exon

position:609316:-1
position: 609316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609405:-1
position: 609405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:607069-607209:-1:exon

position:607069:-1
position: 607069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607209:-1
position: 607209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:603582-603675:-1:exon

position:603582:-1
position: 603582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603675:-1
position: 603675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:600537-600687:-1:exon

position:600537:-1
position: 600537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600687:-1
position: 600687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:595791-595945:-1:exon

position:595791:-1
position: 595791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:595945:-1
position: 595945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:593882-594012:-1:exon

position:594012:-1
position: 594012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KAT8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: KAT8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone acetyltransferase KAT8
translation: MAAASGGGPGAAAEAPGGGAPGAAGPARDAEVAVEIGETYLCRRADGSWHSAEVIQSRLNEQEAREEFYVHYVGFNRRLDEWVDRNRLALSKSLKEAAQKSSEPFLGELAEPERKITRNQKRKHDEINHVQKTYAEMDPTTAALEKEHEAITKVKYVDKIHIGHYEIDAWYFSPFPEDYGKQPKLWICEFCLKYMKYERSFRLHLGQCQWRQPPGREIYRKGNISVYEVDGKDHKIYCQNLCLLAKLFLDHKTLYFDVEPFVFYLLTEVDRHGAHIVGYFSKEKESPDGNNVACILTLPPYQRRGYGKFLIAFSYELSKLESTVGSPEKPLSDLGKLSYRSYWSWVLLEILRDFRGTLSIKDLSQMTSITQTDIISTLQSLNMVKYWKGQHVICVTPKLVEEHLKSAQYKKPPITVDSICLRWAPPKHKQAKVAKK
SIO_010081: KAT8
subclass of: SO_0000673
so part of: KAT8
location: complement(join(593948..594012,595791..595945,600537..600687,603582..603675,607069..607209,609316..609405,610954..611118,612246..612299,613472..613644,614168..614242,615338..615432,615511..615563))
location: region:593948-615563:-1
so has part: feature:615511-615563:-1:exon
so has part: feature:615338-615432:-1:exon
so has part: feature:614168-614242:-1:exon
so has part: feature:613472-613644:-1:exon
so has part: feature:612246-612299:-1:exon
so has part: feature:610954-611118:-1:exon
so has part: feature:609316-609405:-1:exon
so has part: feature:607069-607209:-1:exon
so has part: feature:603582-603675:-1:exon
so has part: feature:600537-600687:-1:exon
so has part: feature:595791-595945:-1:exon
so has part: feature:593948-594012:-1:exon

XP_032940418.1
type: Protein
SIO_000068: ncbiprotein

position:593948:-1
position: 593948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615511-615563:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615338-615432:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:614168-614242:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:613472-613644:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:612246-612299:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:610954-611118:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:609316-609405:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:607069-607209:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:603582-603675:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:600537-600687:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:595791-595945:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:593948-594012:-1:exon

NOP9
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: NOP9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(636322..647076)
location: region:636322-647076:-1
so has part: feature:636322-647076:-1:exon
subclass of: SO_0000010

117010236
type: Gene
SIO_000068: ncbigene

position:636322:-1
position: 636322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:647076:-1
position: 647076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:636322-647076:-1:exon

NOP9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NOP9
product: NOP9 nucleolar protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 81% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084528.1
SIO_010081: NOP9
subclass of: SO_0000673
so part of: NOP9
location: complement(join(636322..636467,638028..638133,639897..640112,642001..642108,642708..642848,643017..643206,643611..643752,644672..644821,645229..645349,645494..645603,646932..647076))
location: region:636322-647076:-1
so has part: feature:646932-647076:-1:exon
so has part: feature:645494-645603:-1:exon
so has part: feature:645229-645349:-1:exon
so has part: feature:644672-644821:-1:exon
so has part: feature:643611-643752:-1:exon
so has part: feature:643017-643206:-1:exon
so has part: feature:642708-642848:-1:exon
so has part: feature:642001-642108:-1:exon
so has part: feature:639897-640112:-1:exon
so has part: feature:638028-638133:-1:exon
so has part: feature:636322-636467:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:646932-647076:-1:exon

position:646932:-1
position: 646932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:645494-645603:-1:exon

position:645494:-1
position: 645494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:645603:-1
position: 645603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:645229-645349:-1:exon

position:645229:-1
position: 645229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:645349:-1
position: 645349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:644672-644821:-1:exon

position:644672:-1
position: 644672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644821:-1
position: 644821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:643611-643752:-1:exon

position:643611:-1
position: 643611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:643752:-1
position: 643752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:643017-643206:-1:exon

position:643017:-1
position: 643017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:643206:-1
position: 643206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:642708-642848:-1:exon

position:642708:-1
position: 642708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:642848:-1
position: 642848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:642001-642108:-1:exon

position:642001:-1
position: 642001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:642108:-1
position: 642108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:639897-640112:-1:exon

position:639897:-1
position: 639897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:640112:-1
position: 640112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:638028-638133:-1:exon

position:638028:-1
position: 638028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638133:-1
position: 638133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:636322-636467:-1:exon

position:636467:-1
position: 636467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NOP9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: NOP9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar protein 9
translation: MAAHAAAPAGPGLSRQRRQSVPRLDPDTAEYFRRALEMLEEGLSEEELALFVPAVLSEAASAPPQILAVSPGPSRLLLRLLPLSPELLEGLVGEVGKDLGGLARDPNGSFVLRALLGVLGGTGDKVPDPEGAEPKKKWAWPALEGEEPKPKGAELPAWFRPLLEELAQGLEKEMPALLSPACASLCLQGALSALHRSQSPACSRFCRALIGCLGQDSPAHGHSPLLTSLQDPARSRLLEAAMTALDPQGLRELFRGHLKGHVRGVASHRVANHGLQRLLDHAPEDVVSEVLSELGPALEEPLARGHPGVLIALLGAAQRHPRLQGDALRWLFQALRCWAPPKHPQCVAALAQLRPLGGGAEDQEGAEPEPLPAVSLWGSLALQLLLRFRDPSPIWGSLLALPPPALPALARSPPGSRLWERILDSPNVPGSARKRLLRRLQGHWALLARDRSGSRVLDAAWTGSDVIQRAKMAAELAPHLQELLRDPHGRGAARNLGLEFFLRDRGGWERLQRGEGRRGRGLGL
SIO_010081: NOP9
subclass of: SO_0000673
so part of: NOP9
location: complement(join(636322..636467,638028..638133,639897..640112,642001..642108,642708..642848,643017..643206,643611..643752,644672..644821,645229..645349,645494..645603,646932..647076))
location: region:636322-647076:-1
so has part: feature:646932-647076:-1:exon
so has part: feature:645494-645603:-1:exon
so has part: feature:645229-645349:-1:exon
so has part: feature:644672-644821:-1:exon
so has part: feature:643611-643752:-1:exon
so has part: feature:643017-643206:-1:exon
so has part: feature:642708-642848:-1:exon
so has part: feature:642001-642108:-1:exon
so has part: feature:639897-640112:-1:exon
so has part: feature:638028-638133:-1:exon
so has part: feature:636322-636467:-1:exon

XP_032940419.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:646932-647076:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:645494-645603:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:645229-645349:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:644672-644821:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:643611-643752:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:643017-643206:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:642708-642848:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:642001-642108:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:639897-640112:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:638028-638133:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:636322-636467:-1:exon

ARMC5
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: ARMC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 647896..660962
location: region:647896-660962:1
so has part: feature:647896-660962:1:exon
subclass of: SO_0000010

117010237
type: Gene
SIO_000068: ncbigene

position:647896:1
position: 647896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660962:1
position: 660962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:647896-660962:1:exon

ARMC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ARMC5
product: armadillo repeat containing 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084529.1
SIO_010081: ARMC5
subclass of: SO_0000673
so part of: ARMC5
location: join(647896..648250,649731..649841,651269..651702,655294..655678,660823..660962)
location: region:647896-660962:1
so has part: feature:647896-648250:1:exon
so has part: feature:649731-649841:1:exon
so has part: feature:651269-651702:1:exon
so has part: feature:655294-655678:1:exon
so has part: feature:660823-660962:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:647896-648250:1:exon

position:648250:1
position: 648250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:649731-649841:1:exon

position:649731:1
position: 649731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:649841:1
position: 649841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:651269-651702:1:exon

position:651269:1
position: 651269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651702:1
position: 651702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:655294-655678:1:exon

position:655294:1
position: 655294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:655678:1
position: 655678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:660823-660962:1:exon

position:660823:1
position: 660823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARMC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ARMC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: armadillo repeat-containing protein 5
translation: MSESLGWCVEAVRAAAEPSLSRALQALRGRHTRRAGGPARFRERGGLGPLLELVGPERPRRVLELALSVLGNCCTEPGCRRQARSLGGVPRLVSILAVPNVPEGVAGRAARALANLALEAPGAREVLEAGAAPLLISLASSCTSPTPLLNSARALRILCPSPTPQTPPPPSLPLPHRALAVSTLSSRLSLLSPCHPCCPLLLRSLRALVAPPCPGVVAEGATPALEVLVNLGRGPEESRGAALAVLAALSAQGRLRPKLGELGVVEVVVEAVRRQFESGGSLPPQFESGVRALCLLCREAVNRARVRRCGGLGALLGILREPRAGRWHRRALLALAAFAWDPLALGRLGRAGLVPLLARGLRGEGRGGEGLWGEGMEMEMEEEEEEGEEEEAASVDWPRERRGRALLGALGAAAAAPFGLGLLRHGLSAAGTPRARAAAAAATALLAR
SIO_010081: ARMC5
subclass of: SO_0000673
so part of: ARMC5
location: join(647974..648250,649731..649841,651269..651702,655294..655678,660823..660962)
location: region:647974-660962:1
so has part: feature:647974-648250:1:exon
so has part: feature:649731-649841:1:exon
so has part: feature:651269-651702:1:exon
so has part: feature:655294-655678:1:exon
so has part: feature:660823-660962:1:exon

XP_032940420.1
type: Protein
SIO_000068: ncbiprotein

position:647974:1
position: 647974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:647974-648250:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:649731-649841:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:651269-651702:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:655294-655678:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:660823-660962:1:exon

LOC117010238
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010238
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 667335..676699
location: region:667335-676699:1
so has part: feature:667335-676699:1:exon
subclass of: SO_0000010

117010238
type: Gene
SIO_000068: ncbigene

position:667335:1
position: 667335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:676699:1
position: 676699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:667335-676699:1:exon

LOC117010238
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010238
product: serine/threonine-protein kinase TAO1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033084531.2
SIO_010081: LOC117010238
subclass of: SO_0000673
so part of: LOC117010238
location: join(667335..667525,668422..668569,670660..670731,670842..670943,672298..672343,673360..673456,675355..675468,676597..676699)
location: region:667335-676699:1
so has part: feature:667335-667525:1:exon
so has part: feature:668422-668569:1:exon
so has part: feature:670660-670731:1:exon
so has part: feature:670842-670943:1:exon
so has part: feature:672298-672343:1:exon
so has part: feature:673360-673456:1:exon
so has part: feature:675355-675468:1:exon
so has part: feature:676597-676699:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:667335-667525:1:exon

position:667525:1
position: 667525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:668422-668569:1:exon

position:668422:1
position: 668422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:668569:1
position: 668569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:670660-670731:1:exon

position:670660:1
position: 670660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:670731:1
position: 670731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:670842-670943:1:exon

position:670842:1
position: 670842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:670943:1
position: 670943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:672298-672343:1:exon

position:672298:1
position: 672298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672343:1
position: 672343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:673360-673456:1:exon

position:673360:1
position: 673360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:673456:1
position: 673456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:675355-675468:1:exon

position:675355:1
position: 675355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:675468:1
position: 675468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:676597-676699:1:exon

position:676597:1
position: 676597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117010238
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010238
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase TAO1-like
translation: MPAPRPRPGSLRDPEISELFLKEDPEKIFGDLQEIGHGSFGAVFSARDLRSQELVAIKKMSYRGRASNEKWQDIVREVKVLQRIRHRNAVGFRGCYLRDNTAWLAMEFCVGSALDLLQGQQEPLREEQIGAIIEGALQGLSYLHGLGVIHRDIKASNILLGSPGQVKLGDFGSAAVATPAKSLVGTPYWMAPEVILAMDEGRYDGRADVWSLGITCIELGDD
SIO_010081: LOC117010238
subclass of: SO_0000673
so part of: LOC117010238
location: join(668435..668569,670660..670731,670842..670943,672298..672343,673360..673456,675355..675468,676597..676699)
location: region:668435-676699:1
so has part: feature:668435-668569:1:exon
so has part: feature:670660-670731:1:exon
so has part: feature:670842-670943:1:exon
so has part: feature:672298-672343:1:exon
so has part: feature:673360-673456:1:exon
so has part: feature:675355-675468:1:exon
so has part: feature:676597-676699:1:exon

XP_032940422.1
type: Protein
SIO_000068: ncbiprotein

position:668435:1
position: 668435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:668435-668569:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:670660-670731:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:670842-670943:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:672298-672343:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:673360-673456:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:675355-675468:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:676597-676699:1:exon

LOC117010246
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010246
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 677739..685673
location: region:677739-685673:1
so has part: feature:677739-685673:1:exon
subclass of: SO_0000010

117010246
type: Gene
SIO_000068: ncbigene

position:677739:1
position: 677739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685673:1
position: 685673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:677739-685673:1:exon

LOC117010246
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010246
product: protein spinster homolog 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_033084539.2
SIO_010081: LOC117010246
subclass of: SO_0000673
so part of: LOC117010246
location: join(677739..678048,679112..679301,681828..681893,682164..682262,684345..684519,685483..685673)
location: region:677739-685673:1
so has part: feature:677739-678048:1:exon
so has part: feature:679112-679301:1:exon
so has part: feature:681828-681893:1:exon
so has part: feature:682164-682262:1:exon
so has part: feature:684345-684519:1:exon
so has part: feature:685483-685673:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:677739-678048:1:exon

position:678048:1
position: 678048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:679112-679301:1:exon

position:679112:1
position: 679112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:679301:1
position: 679301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:681828-681893:1:exon

position:681828:1
position: 681828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:681893:1
position: 681893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:682164-682262:1:exon

position:682164:1
position: 682164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:682262:1
position: 682262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:684345-684519:1:exon

position:684345:1
position: 684345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:684519:1
position: 684519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:685483-685673:1:exon

position:685483:1
position: 685483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117010246
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010246
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein spinster homolog 1-like
translation: MSILGQNLPFLGQNFPILAHFGAILTGFFLEFRDFFGISDFLSLPSRTLVLSTLGFTSVAFVTGALALWAPAFLFRVRLARGEGQPCRGGRRCQGDESLLFGALTCSSGVLGVGLGAELSRRLRPRHPRADPLLCAGGLLGGAPCLLLALLCARPCPPAAYVFIFLGETLLSLNWAIVADILLYVVPPSRRSTAEALQIVASHLLGDAGSPYLVGLVSDALGGGAAAVSFQRGAGALLRALLLLPFAAALGGAAFLAAGNALPRDRRRARREALGLPPDADSDDDDGADPAAIVEPPAAGGRTRRVPVAHVLA
SIO_010081: LOC117010246
subclass of: SO_0000673
so part of: LOC117010246
location: join(677756..678048,679112..679301,681828..681893,682164..682262,684345..684519,685483..685601)
location: region:677756-685601:1
so has part: feature:677756-678048:1:exon
so has part: feature:679112-679301:1:exon
so has part: feature:681828-681893:1:exon
so has part: feature:682164-682262:1:exon
so has part: feature:684345-684519:1:exon
so has part: feature:685483-685601:1:exon

XP_032940430.1
type: Protein
SIO_000068: ncbiprotein

position:677756:1
position: 677756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685601:1
position: 685601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:677756-678048:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:679112-679301:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:681828-681893:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:682164-682262:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:684345-684519:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:685483-685601:1:exon

LOC117010248
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010248
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(692301..694797)
location: region:692301-694797:-1
so has part: feature:692301-694797:-1:exon
subclass of: SO_0000011

117010248
type: Gene
SIO_000068: ncbigene

position:692301:-1
position: 692301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694797:-1
position: 694797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:692301-694797:-1:exon

LOC117010248
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117010248
product: uncharacterized LOC117010248
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_004420594.1
SIO_010081: LOC117010248
subclass of: SO_0000673
so part of: LOC117010248
location: complement(join(692301..692873,694756..694797))
location: region:692301-694797:-1
so has part: feature:694756-694797:-1:exon
so has part: feature:692301-692873:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:694756-694797:-1:exon

position:694756:-1
position: 694756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:692301-692873:-1:exon

position:692873:-1
position: 692873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117010239
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010239
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<694800..698428)
location: region:694800-698428:-1
so has part: feature:694800-698428:-1:exon
subclass of: SO_0000010

117010239
type: Gene
SIO_000068: ncbigene

position:694800:-1
position: 694800
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:698428:-1
position: 698428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:694800-698428:-1:exon

LOC117010239
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010239
product: uncharacterized LOC117010239
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084532.1
SIO_010081: LOC117010239
subclass of: SO_0000673
so part of: LOC117010239
location: complement(join(<694800..694919,695188..695424,695895..697190,697673..697901,698331..698428))
location: region:694800-698428:-1
so has part: feature:698331-698428:-1:exon
so has part: feature:697673-697901:-1:exon
so has part: feature:695895-697190:-1:exon
so has part: feature:695188-695424:-1:exon
so has part: feature:694800-694919:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:698331-698428:-1:exon

position:698331:-1
position: 698331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:697673-697901:-1:exon

position:697673:-1
position: 697673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:697901:-1
position: 697901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:695895-697190:-1:exon

position:695895:-1
position: 695895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:697190:-1
position: 697190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:695188-695424:-1:exon

position:695188:-1
position: 695188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:695424:-1
position: 695424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:694800-694919:-1:exon

position:694919:-1
position: 694919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117010239
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010239
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117010239
translation: MGVVFRAQVDPDWLQGVWAWFFGRKQFLIGCKGPSPTPPMPLPPTPPPPRRPSRPISRVSGRAPPPPWAEGAGEGLEEATPPSWGPSPTLGSFEIVRSLGRGSRGEVLEVRRLSDGSRFALKRSLRPLSGPAQRRHWLRECHAQRGAGPAPGLLPLLAAWEQRGRFHLLTPLCPAGSLGHLWRRGARRGGASPLRGVASVLRGVASPVVGAVSFLWGVVSRFWRETAKRGGALSARGVASYHRGVASVLRGVASFLRGVALLPGRIASSPGGVPSTSGGVASSAGGVASTSRGVSSAFKGVPVAFRGVASLFMGVASSLRGVASFLTGRTTSPLPAPSPLADAPEGGVATQNTFPLAARAEVGVSSPRDLSPSPNQRRVGVAEPKTGVSNPESAIFEPAAASGPTAASEPPDGRPMAEWRLRGYLWDVLVALSHLHARPLAHGDVKPDNVLLDAAGRCRLADFGLATPLFGRGGGGEMGGGGGGDPRYVAPEGLAGEGGTPGDIFSLGLTVAELAGERRLPGAGEGWRRIRSGGGGAAAPGKWGGDGEVHPHPSPTPPPPPSGLSPELQAVLAAMLDPDPRLRPSAPELLGGEVLRGAGRWRPLTRLADLGLRLLEDWLEEVPAAVSGFRFRFRGWVWGPRTPPRPPRADPWALRGEEEE
SIO_010081: LOC117010239
subclass of: SO_0000673
so part of: LOC117010239
location: complement(join(<694800..694919,695188..695424,695895..697190,697673..697901,698331..698428))
location: region:694800-698428:-1
so has part: feature:698331-698428:-1:exon
so has part: feature:697673-697901:-1:exon
so has part: feature:695895-697190:-1:exon
so has part: feature:695188-695424:-1:exon
so has part: feature:694800-694919:-1:exon

XP_032940423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:698331-698428:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:697673-697901:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:695895-697190:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:695188-695424:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:694800-694919:-1:exon

LOC117010243
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010243
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(701354..738099)
location: region:701354-738099:-1
so has part: feature:701354-738099:-1:exon
subclass of: SO_0000010

117010243
type: Gene
SIO_000068: ncbigene

position:701354:-1
position: 701354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:738099:-1
position: 738099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:701354-738099:-1:exon

LOC117010243
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010243
product: integrin alpha-X-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084536.1
SIO_010081: LOC117010243
subclass of: SO_0000673
so part of: LOC117010243
location: complement(join(701354..701476,702139..702249,703361..703453,704125..704238,704940..705038,705121..705249,705982..706063,706911..706988,707263..707342,708921..709028,710960..711095,712714..712787,714002..714133,715338..715489,717600..717757,718909..719039,719570..719776,720525..720692,722140..722279,723127..723283,723367..723440,724592..724742,726808..726961,727748..727893,729092..729222,730044..730158,732043..732107,734754..734860,736202..736310,738038..738099))
location: region:701354-738099:-1
so has part: feature:738038-738099:-1:exon
so has part: feature:736202-736310:-1:exon
so has part: feature:734754-734860:-1:exon
so has part: feature:732043-732107:-1:exon
so has part: feature:730044-730158:-1:exon
so has part: feature:729092-729222:-1:exon
so has part: feature:727748-727893:-1:exon
so has part: feature:726808-726961:-1:exon
so has part: feature:724592-724742:-1:exon
so has part: feature:723367-723440:-1:exon
so has part: feature:723127-723283:-1:exon
so has part: feature:722140-722279:-1:exon
so has part: feature:720525-720692:-1:exon
so has part: feature:719570-719776:-1:exon
so has part: feature:718909-719039:-1:exon
so has part: feature:717600-717757:-1:exon
so has part: feature:715338-715489:-1:exon
so has part: feature:714002-714133:-1:exon
so has part: feature:712714-712787:-1:exon
so has part: feature:710960-711095:-1:exon
so has part: feature:708921-709028:-1:exon
so has part: feature:707263-707342:-1:exon
so has part: feature:706911-706988:-1:exon
so has part: feature:705982-706063:-1:exon
so has part: feature:705121-705249:-1:exon
so has part: feature:704940-705038:-1:exon
so has part: feature:704125-704238:-1:exon
so has part: feature:703361-703453:-1:exon
so has part: feature:702139-702249:-1:exon
so has part: feature:701354-701476:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:738038-738099:-1:exon

position:738038:-1
position: 738038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:736202-736310:-1:exon

position:736202:-1
position: 736202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736310:-1
position: 736310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:734754-734860:-1:exon

position:734754:-1
position: 734754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:734860:-1
position: 734860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:732043-732107:-1:exon

position:732043:-1
position: 732043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:732107:-1
position: 732107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:730044-730158:-1:exon

position:730044:-1
position: 730044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:730158:-1
position: 730158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:729092-729222:-1:exon

position:729092:-1
position: 729092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:729222:-1
position: 729222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:727748-727893:-1:exon

position:727748:-1
position: 727748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727893:-1
position: 727893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:726808-726961:-1:exon

position:726808:-1
position: 726808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:726961:-1
position: 726961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:724592-724742:-1:exon

position:724592:-1
position: 724592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:724742:-1
position: 724742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:723367-723440:-1:exon

position:723367:-1
position: 723367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723440:-1
position: 723440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:723127-723283:-1:exon

position:723127:-1
position: 723127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723283:-1
position: 723283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:722140-722279:-1:exon

position:722140:-1
position: 722140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722279:-1
position: 722279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:720525-720692:-1:exon

position:720525:-1
position: 720525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:720692:-1
position: 720692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:719570-719776:-1:exon

position:719570:-1
position: 719570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719776:-1
position: 719776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:718909-719039:-1:exon

position:718909:-1
position: 718909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719039:-1
position: 719039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:717600-717757:-1:exon

position:717600:-1
position: 717600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717757:-1
position: 717757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:715338-715489:-1:exon

position:715338:-1
position: 715338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715489:-1
position: 715489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:714002-714133:-1:exon

position:714002:-1
position: 714002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:714133:-1
position: 714133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:712714-712787:-1:exon

position:712714:-1
position: 712714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712787:-1
position: 712787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:710960-711095:-1:exon

position:710960:-1
position: 710960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:711095:-1
position: 711095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:708921-709028:-1:exon

position:708921:-1
position: 708921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709028:-1
position: 709028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:707263-707342:-1:exon

position:707263:-1
position: 707263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707342:-1
position: 707342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:706911-706988:-1:exon

position:706911:-1
position: 706911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:706988:-1
position: 706988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:705982-706063:-1:exon

position:705982:-1
position: 705982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:706063:-1
position: 706063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:705121-705249:-1:exon

position:705121:-1
position: 705121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705249:-1
position: 705249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:704940-705038:-1:exon

position:704940:-1
position: 704940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705038:-1
position: 705038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:704125-704238:-1:exon

position:704125:-1
position: 704125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704238:-1
position: 704238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:703361-703453:-1:exon

position:703361:-1
position: 703361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703453:-1
position: 703453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:702139-702249:-1:exon

position:702139:-1
position: 702139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702249:-1
position: 702249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:701354-701476:-1:exon

position:701476:-1
position: 701476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117010243
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010243
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrin alpha-X-like
translation: MEPRELLVLLGTALLCRALDLESPLVFRGDADAEFGASVAQFGSGADGWVLVGAPLARGPGANDSGSVFRCGLRSGECEQLQVRGPSGAVNSSLGLAMAAGDDSVLVCGPTCPRVCGANVHLSGFCVRLDTALRPQGSLPEKLPECPPLSMDIALLVDGSGSIVPRDFQTMLRFLAEVMRRFRGSDAQFSLVQYSYAFRVHFSFRDFRRSRDPVRLLAGVRQLTGTTRTASAIKFVLENMFVSSAGARPDARRILVVVTDGEKTDDRLEYSDVIPAAERMAVTRYAIGVGQAFSSPWAQQELDAIASAPPGEHVFRVDNFDALARIHTQLQEKIFAIEGTHSAHSSSFQLEMAQEGFSAALTPAGPVLGAVGAFDWSGGAFVYGGGGAATFVNGTHLGTPGAHLGDGEDARDAYLGYSAAVVPLGRTWGLALGAPRYAHLGRVLVLQPGSTWTVRAAANGTQVGSYFGASLLALQPCPGEPRPGEPRPGEALKLLVGAPLFYGGGSGGRVHLCELQGQSAHLSCALSLRGSPGQPLGRFGASLAHLGDLDGDRCAEVAVGAPLEDDGRGAVYLFRGAPGGLRAEGVQRIPGSAFPSQPRFFGRSLSGGRDLSGDHLPDLAVGARGQVLLLRSPPLLQVRLQVSFEPQVIPAAAVECPEGEELRAHLATAKICFQGKKITQDNYGPAVSLSLWFLAELDPGRAHGRADFGENSAQNGSVRVGEGRQCRSLEIRAKGCPRDTLTPLTLRVTLGGRGDPLPGGGGLRTRLGPGSDTAVTSLLPFEHDCGADNACEDELGLRLSTAGVLVVGEGDALELTLTLSNSGESSFGPGVLLEHPGALSFRKVQVLQDSRRSGSLLCHSEPPEGRGRRSLCQVQPPVLRRGGQVTFKLTLDVPPDAELGDILEVTANATSENGGSGGRSQSATIPVRYQVLLVLASAADSTRYLNVSMGGAAPAPTPVSHHYQVKVLGQRGLPANVTFLVPSRLGQEQLWEHLEVTPEQVTVTPGQEQPRCQEGPEHPGHAQDTPGAHLGQAQDSPAHLVCPGLTCREFRCSVPHLSPPRTWDFRVGGTLRLGWVGQLQQPKLHLFTSAQVSFDQRRYKNTWGSNELQVQTELEQVLTPNPLPLILGASLGGLLLLGLVALGLYKVGFFRRRYQEMLEGSETPGDAPGEPQEPPKSE
SIO_010081: LOC117010243
subclass of: SO_0000673
so part of: LOC117010243
location: complement(join(701378..701476,702139..702249,703361..703453,704125..704238,704940..705038,705121..705249,705982..706063,706911..706988,707263..707342,708921..709028,710960..711095,712714..712787,714002..714133,715338..715489,717600..717757,718909..719039,719570..719776,720525..720692,722140..722279,723127..723283,723367..723440,724592..724742,726808..726961,727748..727893,729092..729222,730044..730158,732043..732107,734754..734860,736202..736310,738038..738074))
location: region:701378-738074:-1
so has part: feature:738038-738074:-1:exon
so has part: feature:736202-736310:-1:exon
so has part: feature:734754-734860:-1:exon
so has part: feature:732043-732107:-1:exon
so has part: feature:730044-730158:-1:exon
so has part: feature:729092-729222:-1:exon
so has part: feature:727748-727893:-1:exon
so has part: feature:726808-726961:-1:exon
so has part: feature:724592-724742:-1:exon
so has part: feature:723367-723440:-1:exon
so has part: feature:723127-723283:-1:exon
so has part: feature:722140-722279:-1:exon
so has part: feature:720525-720692:-1:exon
so has part: feature:719570-719776:-1:exon
so has part: feature:718909-719039:-1:exon
so has part: feature:717600-717757:-1:exon
so has part: feature:715338-715489:-1:exon
so has part: feature:714002-714133:-1:exon
so has part: feature:712714-712787:-1:exon
so has part: feature:710960-711095:-1:exon
so has part: feature:708921-709028:-1:exon
so has part: feature:707263-707342:-1:exon
so has part: feature:706911-706988:-1:exon
so has part: feature:705982-706063:-1:exon
so has part: feature:705121-705249:-1:exon
so has part: feature:704940-705038:-1:exon
so has part: feature:704125-704238:-1:exon
so has part: feature:703361-703453:-1:exon
so has part: feature:702139-702249:-1:exon
so has part: feature:701378-701476:-1:exon

XP_032940427.1
type: Protein
SIO_000068: ncbiprotein

position:701378:-1
position: 701378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:738074:-1
position: 738074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:738038-738074:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:736202-736310:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:734754-734860:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:732043-732107:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:730044-730158:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:729092-729222:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:727748-727893:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:726808-726961:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:724592-724742:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:723367-723440:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:723127-723283:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:722140-722279:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:720525-720692:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:719570-719776:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:718909-719039:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:717600-717757:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:715338-715489:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:714002-714133:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:712714-712787:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:710960-711095:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:708921-709028:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:707263-707342:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:706911-706988:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:705982-706063:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:705121-705249:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:704940-705038:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:704125-704238:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:703361-703453:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:702139-702249:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:701378-701476:-1:exon

LOC117010247
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010247
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 740634..743458
location: region:740634-743458:1
so has part: feature:740634-743458:1:exon
subclass of: SO_0000010

117010247
type: Gene
SIO_000068: ncbigene

position:740634:1
position: 740634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:743458:1
position: 743458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:740634-743458:1:exon

LOC117010247
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010247
product: translational activator of cytochrome c oxidase 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084540.2
SIO_010081: LOC117010247
subclass of: SO_0000673
so part of: LOC117010247
location: join(740634..740933,741165..741274,742193..742326,742607..742763,743186..743458)
location: region:740634-743458:1
so has part: feature:740634-740933:1:exon
so has part: feature:741165-741274:1:exon
so has part: feature:742193-742326:1:exon
so has part: feature:742607-742763:1:exon
so has part: feature:743186-743458:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:740634-740933:1:exon

position:740933:1
position: 740933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:741165-741274:1:exon

position:741165:1
position: 741165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741274:1
position: 741274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:742193-742326:1:exon

position:742193:1
position: 742193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:742326:1
position: 742326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:742607-742763:1:exon

position:742607:1
position: 742607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:742763:1
position: 742763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:743186-743458:1:exon

position:743186:1
position: 743186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117010247
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010247
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translational activator of cytochrome c oxidase 1
translation: MAALGLRLPGLGRAPVLGCRGIPGLGPAPVLGCRGLPPGLGAVPVPPGRSMAGHNRWSKVRNVKGPRDAERSRLFQRMSQLLRAAAREGGPEPSLNPALAAVIQQCRSHNMPKATIEGALRSVRERPAAVSRLLLEARGPGGSVLLLDVLTDNVRRCQAELKELLGHHGASLTTGVRHGFEPVGVVRVSGRTLAMEAALEAAAVAGAQDVVAEDEDAAELKFLCDPSALRSVRQGLVDAGLRPLSAAVEFVPRSPLALAEGPRAAAERLLRALAEWPDIVRLYHNVQDGPDVTGGHSAPAAPTEGQ
SIO_010081: LOC117010247
subclass of: SO_0000673
so part of: LOC117010247
location: join(740672..740933,741165..741274,742193..742326,742607..742763,743186..743443)
location: region:740672-743443:1
so has part: feature:740672-740933:1:exon
so has part: feature:741165-741274:1:exon
so has part: feature:742193-742326:1:exon
so has part: feature:742607-742763:1:exon
so has part: feature:743186-743443:1:exon

XP_032940431.1
type: Protein
SIO_000068: ncbiprotein

position:740672:1
position: 740672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:743443:1
position: 743443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:740672-740933:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:741165-741274:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:742193-742326:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:742607-742763:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:743186-743443:1:exon

LOC117010240
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010240
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 747879..766836
location: region:747879-766836:1
so has part: feature:747879-766836:1:exon
subclass of: SO_0000010

117010240
type: Gene
SIO_000068: ncbigene

position:747879:1
position: 747879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:766836:1
position: 766836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:747879-766836:1:exon

LOC117010240
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010240
product: sarcoplasmic/endoplasmic reticulum calcium ATPase 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 ESTs, 1 Protein, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084533.1
SIO_010081: LOC117010240
subclass of: SO_0000673
so part of: LOC117010240
location: join(747879..747896,749640..749696,749807..749863,749957..750013,750119..750250,751431..751556,753357..753575,754836..755171,757173..757393,758656..758858,760671..760756,761680..761813,762302..762419,764516..764633,766805..766836)
location: region:747879-766836:1
so has part: feature:747879-747896:1:exon
so has part: feature:749640-749696:1:exon
so has part: feature:749807-749863:1:exon
so has part: feature:749957-750013:1:exon
so has part: feature:750119-750250:1:exon
so has part: feature:751431-751556:1:exon
so has part: feature:753357-753575:1:exon
so has part: feature:754836-755171:1:exon
so has part: feature:757173-757393:1:exon
so has part: feature:758656-758858:1:exon
so has part: feature:760671-760756:1:exon
so has part: feature:761680-761813:1:exon
so has part: feature:762302-762419:1:exon
so has part: feature:764516-764633:1:exon
so has part: feature:766805-766836:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:747879-747896:1:exon

position:747896:1
position: 747896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:749640-749696:1:exon

position:749640:1
position: 749640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:749696:1
position: 749696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:749807-749863:1:exon

position:749807:1
position: 749807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:749863:1
position: 749863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:749957-750013:1:exon

position:749957:1
position: 749957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:750013:1
position: 750013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:750119-750250:1:exon

position:750119:1
position: 750119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:750250:1
position: 750250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:751431-751556:1:exon

position:751431:1
position: 751431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:751556:1
position: 751556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:753357-753575:1:exon

position:753357:1
position: 753357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753575:1
position: 753575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:754836-755171:1:exon

position:754836:1
position: 754836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:755171:1
position: 755171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:757173-757393:1:exon

position:757173:1
position: 757173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757393:1
position: 757393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:758656-758858:1:exon

position:758656:1
position: 758656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758858:1
position: 758858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:760671-760756:1:exon

position:760671:1
position: 760671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:760756:1
position: 760756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:761680-761813:1:exon

position:761680:1
position: 761680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761813:1
position: 761813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:762302-762419:1:exon

position:762302:1
position: 762302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:762419:1
position: 762419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:764516-764633:1:exon

position:764516:1
position: 764516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:764633:1
position: 764633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:766805-766836:1:exon

position:766805:1
position: 766805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117010240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010240
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sarcoplasmic/endoplasmic reticulum calcium ATPase 1-like
translation: MEGEPQAKGVYEKVGEATETALTCPAKGVYEKVGEATETALTCPAKGVYEKVGEATETALTCPAKGVYEKVGEATETALTCLVEKMNVFNTDVRNLSKVERANACNAVIKQLMKKEFTLEFSRDRKSMSVYCSPAKASRAAVGNKMFVKGAPEGVIDRCSYVRVGTARVPLTPAVKDKIQAVIREWGTGRDTLRCLALATRDTPPKKEEMALEDSSKFAEYETDLTFVGCVGMLDPPRKEVMGSIRLCRDAGIRVIMITGDNKGTAIAICRRIGIFGEDEEVSGKAYTGREFDDLPLSEQREACRRACCFARVEPTHKSKIVEFLQSFDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPPRSPKEPLISGWLFFRYLAIGGYVGAATVGAAAWWFLFAEDGPSVTYHQLTHFMQCSEHNVEFEGLDCDIFESPVPMTMALSVLVTIEMCNALNSLSENQSLARMPPWVNIWLVGSICLSMSLHFVILYIDPLPMIFKLTPLSLTHWLMVIKISFPVILLDETLKFIARNYLEADEPARKHRK
SIO_010081: LOC117010240
subclass of: SO_0000673
so part of: LOC117010240
location: join(747879..747896,749640..749696,749807..749863,749957..750013,750119..750250,751431..751556,753357..753575,754836..755171,757173..757393,758656..758858,760671..760756,761680..761813,762302..762419,764516..764633,766805..766836)
location: region:747879-766836:1
so has part: feature:747879-747896:1:exon
so has part: feature:749640-749696:1:exon
so has part: feature:749807-749863:1:exon
so has part: feature:749957-750013:1:exon
so has part: feature:750119-750250:1:exon
so has part: feature:751431-751556:1:exon
so has part: feature:753357-753575:1:exon
so has part: feature:754836-755171:1:exon
so has part: feature:757173-757393:1:exon
so has part: feature:758656-758858:1:exon
so has part: feature:760671-760756:1:exon
so has part: feature:761680-761813:1:exon
so has part: feature:762302-762419:1:exon
so has part: feature:764516-764633:1:exon
so has part: feature:766805-766836:1:exon

XP_032940424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:747879-747896:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:749640-749696:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:749807-749863:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:749957-750013:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:750119-750250:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:751431-751556:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:753357-753575:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:754836-755171:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:757173-757393:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:758656-758858:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:760671-760756:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:761680-761813:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:762302-762419:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:764516-764633:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:766805-766836:1:exon

FUS
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: FUS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 770108..807133
location: region:770108-807133:1
so has part: feature:770108-807133:1:exon
subclass of: SO_0000010

117010244
type: Gene
SIO_000068: ncbigene

position:770108:1
position: 770108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807133:1
position: 807133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:770108-807133:1:exon

FUS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: FUS
product: FUS RNA binding protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033084537.1
SIO_010081: FUS
subclass of: SO_0000673
so part of: FUS
location: join(770108..770193,772860..772884,772976..773127,775036..775174,776125..776282,782818..782992,788564..788598,790727..790759,792020..792126,795544..795673,796558..796653,800423..800531,801827..801978,805621..805762,807074..807133)
location: region:770108-807133:1
so has part: feature:770108-770193:1:exon
so has part: feature:772860-772884:1:exon
so has part: feature:772976-773127:1:exon
so has part: feature:775036-775174:1:exon
so has part: feature:776125-776282:1:exon
so has part: feature:782818-782992:1:exon
so has part: feature:788564-788598:1:exon
so has part: feature:790727-790759:1:exon
so has part: feature:792020-792126:1:exon
so has part: feature:795544-795673:1:exon
so has part: feature:796558-796653:1:exon
so has part: feature:800423-800531:1:exon
so has part: feature:801827-801978:1:exon
so has part: feature:805621-805762:1:exon
so has part: feature:807074-807133:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:770108-770193:1:exon

position:770193:1
position: 770193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:772860-772884:1:exon

position:772860:1
position: 772860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:772884:1
position: 772884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:772976-773127:1:exon

position:772976:1
position: 772976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:773127:1
position: 773127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:775036-775174:1:exon

position:775036:1
position: 775036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:775174:1
position: 775174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:776125-776282:1:exon

position:776125:1
position: 776125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:776282:1
position: 776282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:782818-782992:1:exon

position:782818:1
position: 782818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:782992:1
position: 782992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:788564-788598:1:exon

position:788564:1
position: 788564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788598:1
position: 788598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:790727-790759:1:exon

position:790727:1
position: 790727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:790759:1
position: 790759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:792020-792126:1:exon

position:792020:1
position: 792020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:792126:1
position: 792126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:795544-795673:1:exon

position:795544:1
position: 795544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:795673:1
position: 795673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:796558-796653:1:exon

position:796558:1
position: 796558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:796653:1
position: 796653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:800423-800531:1:exon

position:800423:1
position: 800423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:800531:1
position: 800531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:801827-801978:1:exon

position:801827:1
position: 801827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:801978:1
position: 801978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:805621-805762:1:exon

position:805621:1
position: 805621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805762:1
position: 805762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:807074-807133:1:exon

position:807074:1
position: 807074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FUS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: FUS
product: FUS RNA binding protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033084538.1
SIO_010081: FUS
subclass of: SO_0000673
so part of: FUS
location: join(770108..770193,772860..772884,772976..773127,775036..775174,776125..776282,782818..782992,788564..788598,790727..790759,792020..792126,795544..795673,796558..796653,800423..800531,801827..801974,802027..802053)
location: region:770108-802053:1
so has part: feature:770108-770193:1:exon
so has part: feature:772860-772884:1:exon
so has part: feature:772976-773127:1:exon
so has part: feature:775036-775174:1:exon
so has part: feature:776125-776282:1:exon
so has part: feature:782818-782992:1:exon
so has part: feature:788564-788598:1:exon
so has part: feature:790727-790759:1:exon
so has part: feature:792020-792126:1:exon
so has part: feature:795544-795673:1:exon
so has part: feature:796558-796653:1:exon
so has part: feature:800423-800531:1:exon
so has part: feature:801827-801974:1:exon
so has part: feature:802027-802053:1:exon

position:802053:1
position: 802053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:770108-770193:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:772860-772884:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:772976-773127:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:775036-775174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:776125-776282:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:782818-782992:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:788564-788598:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:790727-790759:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:792020-792126:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:795544-795673:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:796558-796653:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:800423-800531:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:801827-801974:1:exon

position:801974:1
position: 801974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:802027-802053:1:exon

position:802027:1
position: 802027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FUS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: FUS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein FUS isoform X1
translation: MASNDYSQTATQSYGAYPAPPSQSYSQGGGQGYSQQSYGGYGQSSDTGYGQGGYSSSYGQSQSGYSAPAAPPSYGSGGFGSGQSSQGSYGQTSSYPGYSQPPAAASASGSYGGSGSSSYGQAPSGGYNQQQSGGYNQQSYGQQSSYNPPPSYSQQGQYSSGGSNSYGQDSSLSSGGYQEPGGGFGSSAPPERSRGRGAFGSRGGFERGSRGGRGNRGATVGGGERGGFNKFGGPRDQGPRHEPGEQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFSRGGGGRGRGRGGPMGRGGFGSGGSGGRGGFTGGGGAQQRAGDWKCPNPACENMNFSWRNECNQCKAPKPEGGPGGPHLGGGGAGKYPGGGGRGGGNHMGGFEDRRGGRGGFDRGGFRGRGGDRGGFRGGRGGGERGGFGPGKMDSRGDHRQDRRERPY
SIO_010081: FUS
subclass of: SO_0000673
so part of: FUS
location: join(770181..770193,772860..772884,772976..773127,775036..775174,776125..776282,782818..782992,788564..788598,790727..790759,792020..792126,795544..795673,796558..796653,800423..800531,801827..801978,805621..805762,807074..807113)
location: region:770181-807113:1
so has part: feature:770181-770193:1:exon
so has part: feature:772860-772884:1:exon
so has part: feature:772976-773127:1:exon
so has part: feature:775036-775174:1:exon
so has part: feature:776125-776282:1:exon
so has part: feature:782818-782992:1:exon
so has part: feature:788564-788598:1:exon
so has part: feature:790727-790759:1:exon
so has part: feature:792020-792126:1:exon
so has part: feature:795544-795673:1:exon
so has part: feature:796558-796653:1:exon
so has part: feature:800423-800531:1:exon
so has part: feature:801827-801978:1:exon
so has part: feature:805621-805762:1:exon
so has part: feature:807074-807113:1:exon

XP_032940428.1
type: Protein
SIO_000068: ncbiprotein

position:770181:1
position: 770181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807113:1
position: 807113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:770181-770193:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:772860-772884:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:772976-773127:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:775036-775174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:776125-776282:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:782818-782992:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:788564-788598:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:790727-790759:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:792020-792126:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:795544-795673:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:796558-796653:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:800423-800531:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:801827-801978:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:805621-805762:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:807074-807113:1:exon

FUS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: FUS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein FUS isoform X2
translation: MASNDYSQTATQSYGAYPAPPSQSYSQGGGQGYSQQSYGGYGQSSDTGYGQGGYSSSYGQSQSGYSAPAAPPSYGSGGFGSGQSSQGSYGQTSSYPGYSQPPAAASASGSYGGSGSSSYGQAPSGGYNQQQSGGYNQQSYGQQSSYNPPPSYSQQGQYSSGGSNSYGQDSSLSSGGYQEPGGGFGSSAPPERSRGRGAFGSRGGFERGSRGGRGNRGATVGGGERGGFNKFGGPRDQGPRHEPGEQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFSRGGGGRGRGRGGPMGRGGFGSGGSGGRGGFTGGGGAQQRAGDWKCPNPACENMNFSWRNECNQCKAPKPEGGPGGPHLGGGGAGKYPGGGGRGGGNHMGE
SIO_010081: FUS
subclass of: SO_0000673
so part of: FUS
location: join(770181..770193,772860..772884,772976..773127,775036..775174,776125..776282,782818..782992,788564..788598,790727..790759,792020..792126,795544..795673,796558..796653,800423..800531,801827..801974,802027..802038)
location: region:770181-802038:1
so has part: feature:770181-770193:1:exon
so has part: feature:772860-772884:1:exon
so has part: feature:772976-773127:1:exon
so has part: feature:775036-775174:1:exon
so has part: feature:776125-776282:1:exon
so has part: feature:782818-782992:1:exon
so has part: feature:788564-788598:1:exon
so has part: feature:790727-790759:1:exon
so has part: feature:792020-792126:1:exon
so has part: feature:795544-795673:1:exon
so has part: feature:796558-796653:1:exon
so has part: feature:800423-800531:1:exon
so has part: feature:801827-801974:1:exon
so has part: feature:802027-802038:1:exon

XP_032940429.1
type: Protein
SIO_000068: ncbiprotein

position:802038:1
position: 802038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:770181-770193:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:772860-772884:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:772976-773127:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:775036-775174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:776125-776282:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:782818-782992:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:788564-788598:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:790727-790759:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:792020-792126:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:795544-795673:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:796558-796653:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:800423-800531:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:801827-801974:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:802027-802038:1:exon

LOC117010241
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010241
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 807540..839890
location: region:807540-839890:1
so has part: feature:807540-839890:1:exon
subclass of: SO_0000010

117010241
type: Gene
SIO_000068: ncbigene

position:807540:1
position: 807540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:839890:1
position: 839890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:807540-839890:1:exon

LOC117010241
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010241
product: uncharacterized LOC117010241
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084534.2
SIO_010081: LOC117010241
subclass of: SO_0000673
so part of: LOC117010241
location: join(807540..807986,809197..809229,810139..810301,813124..813440,814726..814910,815808..816104,820937..821014,822880..822979,825184..825258,827109..827170,829142..829250,831789..831865,835460..835597,838500..838610,839421..839890)
location: region:807540-839890:1
so has part: feature:807540-807986:1:exon
so has part: feature:809197-809229:1:exon
so has part: feature:810139-810301:1:exon
so has part: feature:813124-813440:1:exon
so has part: feature:814726-814910:1:exon
so has part: feature:815808-816104:1:exon
so has part: feature:820937-821014:1:exon
so has part: feature:822880-822979:1:exon
so has part: feature:825184-825258:1:exon
so has part: feature:827109-827170:1:exon
so has part: feature:829142-829250:1:exon
so has part: feature:831789-831865:1:exon
so has part: feature:835460-835597:1:exon
so has part: feature:838500-838610:1:exon
so has part: feature:839421-839890:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:807540-807986:1:exon

position:807986:1
position: 807986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:809197-809229:1:exon

position:809197:1
position: 809197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:809229:1
position: 809229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:810139-810301:1:exon

position:810139:1
position: 810139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:810301:1
position: 810301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:813124-813440:1:exon

position:813124:1
position: 813124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:813440:1
position: 813440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:814726-814910:1:exon

position:814726:1
position: 814726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:814910:1
position: 814910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:815808-816104:1:exon

position:815808:1
position: 815808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:816104:1
position: 816104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:820937-821014:1:exon

position:820937:1
position: 820937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:821014:1
position: 821014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:822880-822979:1:exon

position:822880:1
position: 822880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:822979:1
position: 822979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:825184-825258:1:exon

position:825184:1
position: 825184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:825258:1
position: 825258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:827109-827170:1:exon

position:827109:1
position: 827109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:827170:1
position: 827170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:829142-829250:1:exon

position:829142:1
position: 829142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:829250:1
position: 829250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:831789-831865:1:exon

position:831789:1
position: 831789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:831865:1
position: 831865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:835460-835597:1:exon

position:835460:1
position: 835460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:835597:1
position: 835597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:838500-838610:1:exon

position:838500:1
position: 838500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:838610:1
position: 838610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:839421-839890:1:exon

position:839421:1
position: 839421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117010241
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010241
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117010241
translation: MRRRRREPGAEPGAGPVLLLLLLLLGGHWGVTAQDDTVPCGTPVHRRVVGGSGAQEGQWPWQVSLAFRGRHVCGGALIHPAWVLTAAHCFPPDNPLPEYRVTLGVLQLLSPPPEAQVRAVSSVTIHPAYRDYRDDRDGAAEPWPGGGNVGGDLALARLHPPALLTRLVRPVCLPAAAVTFDPGSNCTVTGWGHVRTAVPLPPPRTLQQLEVPLLSQRHCHCLYGLGTSGTSGTGTEGLGTPARDTICAGFPQGQRDACQGDSGGPLSCQLGGTWHLAGVVSWGDACGVPARPGVYTAVSPHLAWILSLVPELSPRHPPPNVPKATPEPPRGDGDPCDIGDIPPGWPRPLDTGVGQGGMVPDSDSDSEGGEGLRLRPHDDPALAQARRVGAGLRALALLAARLETLQERELGTPLPPPELHQELQQLRDEIQDLTRKIRGELKGLEPPQEQNPKSVGGRARRTQHGVLAQQLLGLTGRLQLGQARYRQRCLERLRRQLHIAGSPPVSEEELEQMLESGQSEIFVSNVLLSARAARAALDEVGERHRELQKLERGLRELGELFQVLGSAVEGQGELLDRVERHVQDSGAQLGKGREHLGEAQRSQRGARKKRLALAACVSLALLVLVAIVAGSVAAG
SIO_010081: LOC117010241
subclass of: SO_0000673
so part of: LOC117010241
location: join(807908..807986,809197..809229,810139..810301,813124..813440,814726..814910,815808..816104,820937..821014,822880..822979,825184..825258,827109..827170,829142..829250,831789..831865,835460..835597,838500..838610,839421..839504)
location: region:807908-839504:1
so has part: feature:807908-807986:1:exon
so has part: feature:809197-809229:1:exon
so has part: feature:810139-810301:1:exon
so has part: feature:813124-813440:1:exon
so has part: feature:814726-814910:1:exon
so has part: feature:815808-816104:1:exon
so has part: feature:820937-821014:1:exon
so has part: feature:822880-822979:1:exon
so has part: feature:825184-825258:1:exon
so has part: feature:827109-827170:1:exon
so has part: feature:829142-829250:1:exon
so has part: feature:831789-831865:1:exon
so has part: feature:835460-835597:1:exon
so has part: feature:838500-838610:1:exon
so has part: feature:839421-839504:1:exon

XP_032940425.1
type: Protein
SIO_000068: ncbiprotein

position:807908:1
position: 807908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:839504:1
position: 839504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:807908-807986:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:809197-809229:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:810139-810301:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:813124-813440:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:814726-814910:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:815808-816104:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:820937-821014:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:822880-822979:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:825184-825258:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:827109-827170:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:829142-829250:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:831789-831865:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:835460-835597:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:838500-838610:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:839421-839504:1:exon

LOC117010242
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010242
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(856367..876404)
location: region:856367-876404:-1
so has part: feature:856367-876404:-1:exon
subclass of: SO_0000010

117010242
type: Gene
SIO_000068: ncbigene

position:856367:-1
position: 856367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:876404:-1
position: 876404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:856367-876404:-1:exon

LOC117010242
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010242
product: cyclin-dependent kinase 12-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084535.1
SIO_010081: LOC117010242
subclass of: SO_0000673
so part of: LOC117010242
location: complement(join(856367..856613,856710..856853,860215..860275,861826..861997,866364..866605,869859..869926,872210..872271,873692..873733,873926..874189,874442..875478,875815..876111,876142..876404))
location: region:856367-876404:-1
so has part: feature:876142-876404:-1:exon
so has part: feature:875815-876111:-1:exon
so has part: feature:874442-875478:-1:exon
so has part: feature:873926-874189:-1:exon
so has part: feature:873692-873733:-1:exon
so has part: feature:872210-872271:-1:exon
so has part: feature:869859-869926:-1:exon
so has part: feature:866364-866605:-1:exon
so has part: feature:861826-861997:-1:exon
so has part: feature:860215-860275:-1:exon
so has part: feature:856710-856853:-1:exon
so has part: feature:856367-856613:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:876142-876404:-1:exon

position:876142:-1
position: 876142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:875815-876111:-1:exon

position:875815:-1
position: 875815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:876111:-1
position: 876111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:874442-875478:-1:exon

position:874442:-1
position: 874442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875478:-1
position: 875478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:873926-874189:-1:exon

position:873926:-1
position: 873926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:874189:-1
position: 874189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:873692-873733:-1:exon

position:873692:-1
position: 873692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:873733:-1
position: 873733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:872210-872271:-1:exon

position:872210:-1
position: 872210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:872271:-1
position: 872271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:869859-869926:-1:exon

position:869859:-1
position: 869859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:869926:-1
position: 869926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:866364-866605:-1:exon

position:866364:-1
position: 866364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:866605:-1
position: 866605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:861826-861997:-1:exon

position:861826:-1
position: 861826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:861997:-1
position: 861997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:860215-860275:-1:exon

position:860215:-1
position: 860215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:860275:-1
position: 860275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:856710-856853:-1:exon

position:856710:-1
position: 856710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:856853:-1
position: 856853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:856367-856613:-1:exon

position:856613:-1
position: 856613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117010242
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010242
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinase 12-like
translation: MSPPLSRYPGSEPPPLSRYSGSGDGEGEMWEGNEPKLGKFDPKSAKIDPKLVGNDPKMGEFDPKLAKFDPKLGEIEPKSTKIDPKLSKIDPKMIGNDPKLGGFDPKSAKFHPELMGNELKLGGFDPKFGEIDPKSTKFHPKLMGNELRLGGNDPKFGEFDPKSSEFSPNSPGFAPEFSEFAPKFSEMSKSSEISPKSSEFSPNSSEFPPKFSEFAQKFSDFSPKSSEFTLKFSEFSKSSEFSPKSSDFSLNSSKFPTKFSEFSKSSEFSPKSSEFASKFSESSKSSEFSQNFSEISPKSSEFSPKFPESSPKPVKICPKSSEFSQKSSEFSQNFSEISPKSSDFSPKFPEICPKPSKISSKPSDFSQKSSEFTRNFSELSQKSSEICPKPSEISPKFLEICSKPSEFSPKSSETAPKFSDFAPKSSESSQNFSEFCPKPPDLTPKSPDFPPKPKPRRRFSLRSVGRSVRGMLQWRSGEPQNRHNSPQNQQNQQNSQISQNSQNSAQNSAQNPEPAPPWGRLERLRLGPGGGGGVGEGPALELLETPQAAPEPLPELRPPEPGESPSPPDDPDPPSDSELLRGESSEHLSSGPFPFPPPDPGGFPEAPEFGEGVPEHPLAPFPWFHGTLPRLRAAQLVLQGGRGGHGAFLVRQSETRRGEYVLTFNFQGKAKHLRLSLNDSAQCRVQHLWFQSIFDMLEHFRVHPIPLESGGPSDVTLLSYVVASHRIYGRSGSRSILADPSPTPPDPPDGAACAQNPALPGVTALGHGLDVTTMALAAGRVLDIDPGHGWDSASHSSHGWEGVSHGLDVTTMALAAGRVLDIDGGHGWGTSHSRYVTSHGQEGTSHSWEGTSHDLVSTSRSWIGASHVEMVLAMVGCH
SIO_010081: LOC117010242
subclass of: SO_0000673
so part of: LOC117010242
location: complement(join(856367..856613,856710..856853,860215..860275,861826..861997,866364..866605,869859..869926,872210..872271,873692..873733,873926..874189,874442..875478,875815..876111,876142))
location: region:856367-876142:-1
so has part: feature:876142-876142:-1:exon
so has part: feature:875815-876111:-1:exon
so has part: feature:874442-875478:-1:exon
so has part: feature:873926-874189:-1:exon
so has part: feature:873692-873733:-1:exon
so has part: feature:872210-872271:-1:exon
so has part: feature:869859-869926:-1:exon
so has part: feature:866364-866605:-1:exon
so has part: feature:861826-861997:-1:exon
so has part: feature:860215-860275:-1:exon
so has part: feature:856710-856853:-1:exon
so has part: feature:856367-856613:-1:exon

XP_032940426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:876142-876142:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:875815-876111:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:874442-875478:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:873926-874189:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:873692-873733:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:872210-872271:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:869859-869926:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:866364-866605:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:861826-861997:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:860215-860275:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:856710-856853:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:856367-856613:-1:exon

LOC117010257
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010257
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(878029..879793)
location: region:878029-879793:-1
so has part: feature:878029-879793:-1:exon
subclass of: SO_0000010

117010257
type: Gene
SIO_000068: ncbigene

position:878029:-1
position: 878029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:879793:-1
position: 879793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:878029-879793:-1:exon

LOC117010257
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010257
product: H/ACA ribonucleoprotein complex subunit GAR1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033084550.1
SIO_010081: LOC117010257
subclass of: SO_0000673
so part of: LOC117010257
location: complement(join(878029..878147,879515..879793))
location: region:878029-879793:-1
so has part: feature:879515-879793:-1:exon
so has part: feature:878029-878147:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:879515-879793:-1:exon

position:879515:-1
position: 879515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:878029-878147:-1:exon

position:878147:-1
position: 878147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117010257
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010257
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: H/ACA ribonucleoprotein complex subunit GAR1-like
translation: MRTQRSEPPVRKAAPSRRTKPEAERPKQEAEIVFIPEAEVAPPTRKRKRRSGGAEEGGGGGGGEGGRARGSRGARSGAAGAAREQPRRGGAAMPLPRPPPLP
SIO_010081: LOC117010257
subclass of: SO_0000673
so part of: LOC117010257
location: complement(join(878118..878147,879515..879793))
location: region:878118-879793:-1
so has part: feature:879515-879793:-1:exon
so has part: feature:878118-878147:-1:exon

XP_032940441.1
type: Protein
SIO_000068: ncbiprotein

position:878118:-1
position: 878118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:879515-879793:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:878118-878147:-1:exon

LOC117010258
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010258
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 879830..885274
location: region:879830-885274:1
so has part: feature:879830-885274:1:exon
subclass of: SO_0000011

117010258
type: Gene
SIO_000068: ncbigene

position:879830:1
position: 879830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885274:1
position: 885274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:879830-885274:1:exon

LOC117010258
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117010258
product: uncharacterized LOC117010258, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004420597.1
SIO_010081: LOC117010258
subclass of: SO_0000673
so part of: LOC117010258
location: join(879830..879848,880817..880841,882239..882295,883558..883629,885191..885274)
location: region:879830-885274:1
so has part: feature:879830-879848:1:exon
so has part: feature:880817-880841:1:exon
so has part: feature:882239-882295:1:exon
so has part: feature:883558-883629:1:exon
so has part: feature:885191-885274:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:879830-879848:1:exon

position:879848:1
position: 879848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:880817-880841:1:exon

position:880817:1
position: 880817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880841:1
position: 880841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:882239-882295:1:exon

position:882239:1
position: 882239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:882295:1
position: 882295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:883558-883629:1:exon

position:883558:1
position: 883558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:883629:1
position: 883629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:885191-885274:1:exon

position:885191:1
position: 885191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117010258
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117010258
product: uncharacterized LOC117010258, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XR_004420596.1
SIO_010081: LOC117010258
subclass of: SO_0000673
so part of: LOC117010258
location: join(880208..880236,880817..880841,882239..882295,883558..883629,885191..885274)
location: region:880208-885274:1
so has part: feature:880208-880236:1:exon
so has part: feature:880817-880841:1:exon
so has part: feature:882239-882295:1:exon
so has part: feature:883558-883629:1:exon
so has part: feature:885191-885274:1:exon

position:880208:1
position: 880208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880208-880236:1:exon

position:880236:1
position: 880236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:880817-880841:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:882239-882295:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:883558-883629:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:885191-885274:1:exon

LOC117010258
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117010258
product: uncharacterized LOC117010258, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XR_004420595.1
SIO_010081: LOC117010258
subclass of: SO_0000673
so part of: LOC117010258
location: join(880760..880841,882239..882295,883558..883629,885191..885274)
location: region:880760-885274:1
so has part: feature:880760-880841:1:exon
so has part: feature:882239-882295:1:exon
so has part: feature:883558-883629:1:exon
so has part: feature:885191-885274:1:exon

position:880760:1
position: 880760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880760-880841:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:882239-882295:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:883558-883629:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:885191-885274:1:exon

LOC117010218
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010218
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 897386..899121
location: region:897386-899121:1
so has part: feature:897386-899121:1:exon
subclass of: SO_0000011

117010218
type: Gene
SIO_000068: ncbigene

position:897386:1
position: 897386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:899121:1
position: 899121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:897386-899121:1:exon

LOC117010218
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117010218
product: uncharacterized LOC117010218
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XR_004420590.1
SIO_010081: LOC117010218
subclass of: SO_0000673
so part of: LOC117010218
location: join(897386..897425,897631..897691,899081..899121)
location: region:897386-899121:1
so has part: feature:897386-897425:1:exon
so has part: feature:897631-897691:1:exon
so has part: feature:899081-899121:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:897386-897425:1:exon

position:897425:1
position: 897425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:897631-897691:1:exon

position:897631:1
position: 897631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:897691:1
position: 897691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:899081-899121:1:exon

position:899081:1
position: 899081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117010271
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010271
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 899168..899576
location: region:899168-899576:1
so has part: feature:899168-899576:1:exon
subclass of: SO_0000011

117010271
type: Gene
SIO_000068: ncbigene

position:899168:1
position: 899168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:899576:1
position: 899576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:899168-899576:1:exon

LOC117010271
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117010271
product: uncharacterized LOC117010271
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XR_004420601.1
SIO_010081: LOC117010271
subclass of: SO_0000673
so part of: LOC117010271
location: join(899168..899257,899340..899397,899538..899576)
location: region:899168-899576:1
so has part: feature:899168-899257:1:exon
so has part: feature:899340-899397:1:exon
so has part: feature:899538-899576:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:899168-899257:1:exon

position:899257:1
position: 899257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:899340-899397:1:exon

position:899340:1
position: 899340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:899397:1
position: 899397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:899538-899576:1:exon

position:899538:1
position: 899538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition