Catharus ustulatus isolate bCatUst1 chromosome 39, bCatUst1.pri.v2, whole genome shotgun sequence.
type: Entry
definition: Catharus ustulatus isolate bCatUst1 chromosome 39, bCatUst1.pri.v2, whole genome shotgun sequence.
sequence version: NC_046259.1
sequence date: 2021-07-28
sequence: sequence
division: CON
label: NC_046259.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA613294
dblink: SAMN12618602
keyword: WGS
keyword: RefSeq
source: Catharus ustulatus (Swainson's thrush)
organism: Catharus ustulatus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Turdidae; Catharus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020374.1.\nAssembly name: bCatUst1.pri.v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/12/22. The original whole-genome shotgun project has the\naccession WNMQ00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 06-AUG-2020\nAssembly Method :: FALCON v. DX 1.9.0; FALCON-Unzip v.\n 6.0.0.47841; purge_dups github v.\n purge_haplotig (bitbucket v1.0.3+\n 1.Nov.2018); Scaff10x v. 2; Bionano Solve\n v. 3.2.1_04122018; Salsa2 HiC v. 2.2;\n Arrow polishing and gap filling v.\n Smrtlink_6.0.0.47841; Longranger Align v.\n 2.2.2; freebayes v. 1.3.1; gEVAL manual\n curation v. 2020-08-06; VGP assembly\n pipeline v. 1.5\nAssembly Name :: bCatUst1.pri.v2\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 60.58x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Catharus ustulatus Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 928467
topology: linear
so has quality: SO_0000987
location: 1..928467
location: region:1-928467:1
RO_0002162: 91951

NC_046259
type: RefSeq
SIO_000068: refseq

PRJNA613294
type: BioProject
SIO_000068: bioproject

SAMN12618602
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:928467:1
position: 928467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-928467:1:source
so part of: sequence
organism: Catharus ustulatus
mol type: genomic DNA
isolate: bCatUst1
chromosome: 39
sex: female
tissue type: blood
dev stage: adult
country: Canada: Kamloops
lat lon: 50.67613 N 120.33787 W
collection date: 15-Jul-2018
collected by: Kira Delmore

91951
type: Taxonomy
SIO_000068: taxonomy

ARHGEF1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: ARHGEF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <227..26182
location: region:227-26182:1
so has part: feature:227-26182:1:exon
subclass of: SO_0000010

117010203
type: Gene
SIO_000068: ncbigene

position:227:1
position: 227
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:26182:1
position: 26182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227-26182:1:exon

ARHGEF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ARHGEF1
product: Rho guanine nucleotide exchange factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084493.1
SIO_010081: ARHGEF1
subclass of: SO_0000673
so part of: ARHGEF1
location: join(<227..310,389..502,756..854,933..975,1244..1349,1424..1564,3415..3444,3567..3669,3749..3830,3927..3965,4374..4547,4628..4724,5642..5653,6787..6971,8415..8561,8649..8731,10262..10387,10467..10581,11826..11926,12374..12451,14046..14121,14217..14384,16358..16445,18112..18219,20976..21035,23193..23272,24977..25147,26163..26182)
location: region:227-26182:1
so has part: feature:227-310:1:exon
so has part: feature:389-502:1:exon
so has part: feature:756-854:1:exon
so has part: feature:933-975:1:exon
so has part: feature:1244-1349:1:exon
so has part: feature:1424-1564:1:exon
so has part: feature:3415-3444:1:exon
so has part: feature:3567-3669:1:exon
so has part: feature:3749-3830:1:exon
so has part: feature:3927-3965:1:exon
so has part: feature:4374-4547:1:exon
so has part: feature:4628-4724:1:exon
so has part: feature:5642-5653:1:exon
so has part: feature:6787-6971:1:exon
so has part: feature:8415-8561:1:exon
so has part: feature:8649-8731:1:exon
so has part: feature:10262-10387:1:exon
so has part: feature:10467-10581:1:exon
so has part: feature:11826-11926:1:exon
so has part: feature:12374-12451:1:exon
so has part: feature:14046-14121:1:exon
so has part: feature:14217-14384:1:exon
so has part: feature:16358-16445:1:exon
so has part: feature:18112-18219:1:exon
so has part: feature:20976-21035:1:exon
so has part: feature:23193-23272:1:exon
so has part: feature:24977-25147:1:exon
so has part: feature:26163-26182:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:227-310:1:exon

position:310:1
position: 310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:389-502:1:exon

position:389:1
position: 389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502:1
position: 502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:756-854:1:exon

position:756:1
position: 756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:854:1
position: 854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:933-975:1:exon

position:933:1
position: 933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:975:1
position: 975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1244-1349:1:exon

position:1244:1
position: 1244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1349:1
position: 1349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1424-1564:1:exon

position:1424:1
position: 1424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1564:1
position: 1564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3415-3444:1:exon

position:3415:1
position: 3415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3444:1
position: 3444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3567-3669:1:exon

position:3567:1
position: 3567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3669:1
position: 3669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3749-3830:1:exon

position:3749:1
position: 3749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3830:1
position: 3830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3927-3965:1:exon

position:3927:1
position: 3927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3965:1
position: 3965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4374-4547:1:exon

position:4374:1
position: 4374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4547:1
position: 4547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4628-4724:1:exon

position:4628:1
position: 4628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4724:1
position: 4724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5642-5653:1:exon

position:5642:1
position: 5642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5653:1
position: 5653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6787-6971:1:exon

position:6787:1
position: 6787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6971:1
position: 6971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8415-8561:1:exon

position:8415:1
position: 8415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8561:1
position: 8561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8649-8731:1:exon

position:8649:1
position: 8649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8731:1
position: 8731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:10262-10387:1:exon

position:10262:1
position: 10262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10387:1
position: 10387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:10467-10581:1:exon

position:10467:1
position: 10467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10581:1
position: 10581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:11826-11926:1:exon

position:11826:1
position: 11826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11926:1
position: 11926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:12374-12451:1:exon

position:12374:1
position: 12374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12451:1
position: 12451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:14046-14121:1:exon

position:14046:1
position: 14046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14121:1
position: 14121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:14217-14384:1:exon

position:14217:1
position: 14217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14384:1
position: 14384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:16358-16445:1:exon

position:16358:1
position: 16358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16445:1
position: 16445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:18112-18219:1:exon

position:18112:1
position: 18112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18219:1
position: 18219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:20976-21035:1:exon

position:20976:1
position: 20976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21035:1
position: 21035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:23193-23272:1:exon

position:23193:1
position: 23193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23272:1
position: 23272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:24977-25147:1:exon

position:24977:1
position: 24977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25147:1
position: 25147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:26163-26182:1:exon

position:26163:1
position: 26163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARHGEF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ARHGEF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 1
translation: PPCAGARGPAAAAIIGAEDEDFENDIEPTPEEQNSQFQSLEVLRQHPLSLMAFLQHVVLQFDSCPVLCYLHVDMMRRMNPKEGRKQFLEFCHLFLDKAGLLRVPIPHHVQFELERTRPELLSEETQRRFLQDIQNFQEPEISRQLEDFRSKRLMGMTPGEQELSELEWSRARDPSGCESREKQLAEQLLARLEEMHLTISSDEEKSSVIFGAIVTYMKFLGLRTKGGDAKKSKSNFFRKKISGKEPQGKARKGFSLPGAALWGRDAHGAEFRQSKGPEGEAEKPPHPERRGPRGAERGEGGSSRSPRAGGGTAGTPDPPPGLGVTVTPPGGDSAEAEPGTDPPGPLELGDPPPEPPPGEQHLVEEGAESERRRLSLEPGGPGGGEPPPFLPRQPEEAVPRLEPELEQEPPAWRELAAPDALLRLPQREVRRQEVINELFLTEHAHVRMLRVLLELFYQPMLREGFFDEQELSNIFPSLEDLVEVHTVFLDSLKKLREESGFIIAEIGDVLLARFEGTEGSWFQKISARFCSRQSFALEQLKAKQRKDTRFNQFIQEAESRPRCRRLQLKDIIPTEMQRLTKYPLLLLSVTKCTEAAAERAKVEQAAECCRQILNHVNQEVRDMENLMKLKDYQRRLDLSNLKQSTDPLLSEFKNTDITKRTLVHEGPLTWRVARDKAVEVQVLLLDDLLVLLQRQEERLVLRCHSRALAPAPDGKQMLSPVIRLRSAMTREVATDHKAFYVIVSWENGAQIYELVAQSVSDRKNWCSIISDTAGSLKLPGAQRAKAARAGVGHGPQTPLDYRDPSENVGGVPEGAPGPGRPGQGRGRGRNRIRGGPPREARGREGGVAALRRLLQAGGAGAPLPPEQDLGGGPGAAPPEQERRHAGDGAESDGERPQPGGGAAGGESQI
SIO_010081: ARHGEF1
subclass of: SO_0000673
so part of: ARHGEF1
location: join(<227..310,389..502,756..854,933..975,1244..1349,1424..1564,3415..3444,3567..3669,3749..3830,3927..3965,4374..4547,4628..4724,5642..5653,6787..6971,8415..8561,8649..8731,10262..10387,10467..10581,11826..11926,12374..12451,14046..14121,14217..14384,16358..16445,18112..18219,20976..21035,23193..23272,24977..25147,26163..26182)
location: region:227-26182:1
so has part: feature:227-310:1:exon
so has part: feature:389-502:1:exon
so has part: feature:756-854:1:exon
so has part: feature:933-975:1:exon
so has part: feature:1244-1349:1:exon
so has part: feature:1424-1564:1:exon
so has part: feature:3415-3444:1:exon
so has part: feature:3567-3669:1:exon
so has part: feature:3749-3830:1:exon
so has part: feature:3927-3965:1:exon
so has part: feature:4374-4547:1:exon
so has part: feature:4628-4724:1:exon
so has part: feature:5642-5653:1:exon
so has part: feature:6787-6971:1:exon
so has part: feature:8415-8561:1:exon
so has part: feature:8649-8731:1:exon
so has part: feature:10262-10387:1:exon
so has part: feature:10467-10581:1:exon
so has part: feature:11826-11926:1:exon
so has part: feature:12374-12451:1:exon
so has part: feature:14046-14121:1:exon
so has part: feature:14217-14384:1:exon
so has part: feature:16358-16445:1:exon
so has part: feature:18112-18219:1:exon
so has part: feature:20976-21035:1:exon
so has part: feature:23193-23272:1:exon
so has part: feature:24977-25147:1:exon
so has part: feature:26163-26182:1:exon

XP_032940384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:227-310:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:389-502:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:756-854:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:933-975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1244-1349:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1424-1564:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3415-3444:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3567-3669:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3749-3830:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3927-3965:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4374-4547:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4628-4724:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5642-5653:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6787-6971:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8415-8561:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8649-8731:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:10262-10387:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10467-10581:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:11826-11926:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:12374-12451:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:14046-14121:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:14217-14384:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:16358-16445:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:18112-18219:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:20976-21035:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:23193-23272:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:24977-25147:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:26163-26182:1:exon

LOC117010202
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010202
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 26436..27378
location: region:26436-27378:1
so has part: feature:26436-27378:1:exon
subclass of: SO_0000011

117010202
type: Gene
SIO_000068: ncbigene

position:26436:1
position: 26436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27378:1
position: 27378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26436-27378:1:exon

LOC117010202
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117010202
product: uncharacterized LOC117010202
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_004420584.1
SIO_010081: LOC117010202
subclass of: SO_0000673
so part of: LOC117010202
location: join(26436..26525,26803..26865,26953..27378)
location: region:26436-27378:1
so has part: feature:26436-26525:1:exon
so has part: feature:26803-26865:1:exon
so has part: feature:26953-27378:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26436-26525:1:exon

position:26525:1
position: 26525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:26803-26865:1:exon

position:26803:1
position: 26803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26865:1
position: 26865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:26953-27378:1:exon

position:26953:1
position: 26953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ERFL
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: ERFL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(28081..55688)
location: region:28081-55688:-1
so has part: feature:28081-55688:-1:exon
subclass of: SO_0000010

117010161
type: Gene
SIO_000068: ncbigene

position:28081:-1
position: 28081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55688:-1
position: 55688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28081-55688:-1:exon

ERFL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ERFL
product: ETS repressor factor like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084418.2
SIO_010081: ERFL
subclass of: SO_0000673
so part of: ERFL
location: complement(join(28081..28092,28832..28914,30257..30383,30950..31139,33507..33741,34467..34548,55651..55688))
location: region:28081-55688:-1
so has part: feature:55651-55688:-1:exon
so has part: feature:34467-34548:-1:exon
so has part: feature:33507-33741:-1:exon
so has part: feature:30950-31139:-1:exon
so has part: feature:30257-30383:-1:exon
so has part: feature:28832-28914:-1:exon
so has part: feature:28081-28092:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55651-55688:-1:exon

position:55651:-1
position: 55651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:34467-34548:-1:exon

position:34467:-1
position: 34467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34548:-1
position: 34548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:33507-33741:-1:exon

position:33507:-1
position: 33507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33741:-1
position: 33741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:30950-31139:-1:exon

position:30950:-1
position: 30950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31139:-1
position: 31139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:30257-30383:-1:exon

position:30257:-1
position: 30257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30383:-1
position: 30383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:28832-28914:-1:exon

position:28832:-1
position: 28832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28914:-1
position: 28914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:28081-28092:-1:exon

position:28092:-1
position: 28092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ERFL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ERFL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ETS domain-containing transcription factor ERF-like
translation: MDCTCVSDLLLTAPVPALWTPGFAFPEWAYKAESSPGSRQIQLWHFILELLRQEQYREVIAWQGDYGEFVIKDPDEVARLWGVRKCKPHMNYDKLSRALRYYYNKRILHKTKGKRFTYKFNFSKVVLVNYPLLELGGGAPLLLTPAPCPAPTPGPECAPVTPETLQSLFCAPRPADPPGRPPLFERPPETPEKLRLEAAVPFLGSGLSGFSKAPALLGAGGFGRPPPARVPLGIHP
SIO_010081: ERFL
subclass of: SO_0000673
so part of: ERFL
location: complement(join(28081..28092,28832..28914,30257..30383,30950..31139,33507..33741,34467..34530))
location: region:28081-34530:-1
so has part: feature:34467-34530:-1:exon
so has part: feature:33507-33741:-1:exon
so has part: feature:30950-31139:-1:exon
so has part: feature:30257-30383:-1:exon
so has part: feature:28832-28914:-1:exon
so has part: feature:28081-28092:-1:exon

XP_032940309.1
type: Protein
SIO_000068: ncbiprotein

position:34530:-1
position: 34530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34467-34530:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33507-33741:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:30950-31139:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30257-30383:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:28832-28914:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:28081-28092:-1:exon

LOC117010162
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010162
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(61746..62258)
location: region:61746-62258:-1
so has part: feature:61746-62258:-1:exon
subclass of: SO_0000010

117010162
type: Gene
SIO_000068: ncbigene

position:61746:-1
position: 61746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62258:-1
position: 62258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61746-62258:-1:exon

LOC117010162
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010162
product: proline-rich protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_033084419.1
SIO_010081: LOC117010162
subclass of: SO_0000673
so part of: LOC117010162
location: complement(61746..62258)
location: region:61746-62258:-1
so has part: feature:61746-62258:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:61746-62258:-1:exon

LOC117010162
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010162
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich protein 2-like
translation: MDPPDPRGPPPGHTETPPDSPRPPMKPPWTHMDPPKTPSDPPMGTQRHPETPMDTPGPPPDLPMGTRRPPWTHTDHPKTPPDPPMGTQRPPWTPHGPTWTHMDPHGHPDPPHGHPDPPMGTRRPPETPMKPTRTPPDPPTGTQRPPETPMEPTRTPPWTHMDPPWTPRPT
SIO_010081: LOC117010162
subclass of: SO_0000673
so part of: LOC117010162
location: complement(61746..62258)
location: region:61746-62258:-1
so has part: feature:61746-62258:-1:exon

XP_032940310.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61746-62258:-1:exon

RABAC1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: RABAC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 77349..94512
location: region:77349-94512:1
so has part: feature:77349-94512:1:exon
subclass of: SO_0000010

117010195
type: Gene
SIO_000068: ncbigene

position:77349:1
position: 77349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94512:1
position: 94512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77349-94512:1:exon

RABAC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: RABAC1
product: Rab acceptor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033084477.1
SIO_010081: RABAC1
subclass of: SO_0000673
so part of: RABAC1
location: join(77349..77450,85672..85851,90545..90642,91130..91231,93566..93630,94337..94512)
location: region:77349-94512:1
so has part: feature:77349-77450:1:exon
so has part: feature:85672-85851:1:exon
so has part: feature:90545-90642:1:exon
so has part: feature:91130-91231:1:exon
so has part: feature:93566-93630:1:exon
so has part: feature:94337-94512:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:77349-77450:1:exon

position:77450:1
position: 77450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:85672-85851:1:exon

position:85672:1
position: 85672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85851:1
position: 85851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:90545-90642:1:exon

position:90545:1
position: 90545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90642:1
position: 90642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:91130-91231:1:exon

position:91130:1
position: 91130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91231:1
position: 91231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:93566-93630:1:exon

position:93566:1
position: 93566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93630:1
position: 93630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:94337-94512:1:exon

position:94337:1
position: 94337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RABAC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: RABAC1
product: Rab acceptor 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084478.2
SIO_010081: RABAC1
subclass of: SO_0000673
so part of: RABAC1
location: join(77349..77450,85672..85851,90545..90642,91130..91231,93566..93630,93878..93917)
location: region:77349-93917:1
so has part: feature:77349-77450:1:exon
so has part: feature:85672-85851:1:exon
so has part: feature:90545-90642:1:exon
so has part: feature:91130-91231:1:exon
so has part: feature:93566-93630:1:exon
so has part: feature:93878-93917:1:exon

position:93917:1
position: 93917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77349-77450:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:85672-85851:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90545-90642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91130-91231:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:93566-93630:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:93878-93917:1:exon

position:93878:1
position: 93878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RABAC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: RABAC1
product: Rab acceptor 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033084479.1
SIO_010081: RABAC1
subclass of: SO_0000673
so part of: RABAC1
location: join(77349..77450,85672..85851,90545..90642,91130..91231,93566..93630,93721..93789)
location: region:77349-93789:1
so has part: feature:77349-77450:1:exon
so has part: feature:85672-85851:1:exon
so has part: feature:90545-90642:1:exon
so has part: feature:91130-91231:1:exon
so has part: feature:93566-93630:1:exon
so has part: feature:93721-93789:1:exon

position:93789:1
position: 93789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77349-77450:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:85672-85851:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90545-90642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91130-91231:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:93566-93630:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:93721-93789:1:exon

position:93721:1
position: 93721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RABAC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: RABAC1
product: Rab acceptor 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084476.1
SIO_010081: RABAC1
subclass of: SO_0000673
so part of: RABAC1
location: join(77349..77450,85672..85851,90545..90642,91130..91231,93566..93649)
location: region:77349-93649:1
so has part: feature:77349-77450:1:exon
so has part: feature:85672-85851:1:exon
so has part: feature:90545-90642:1:exon
so has part: feature:91130-91231:1:exon
so has part: feature:93566-93649:1:exon

position:93649:1
position: 93649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77349-77450:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:85672-85851:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90545-90642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91130-91231:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:93566-93649:1:exon

RABAC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: RABAC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prenylated Rab acceptor protein 1 isoform X2
translation: MAEAAPPPQELRDSDPRGGLGRVTQWLEARRAALRPWGSFLDQRRFGAPRDLGELWRRLGHNGERFQSNYVVLFLGLVAYCLITSPLLLLALGVFVGAAVAVRVRAREAPLVLLGRELSPAHQLGVAAGVSLPLFWLAGAGSAVFWVLGAALVFLGSHAAFRQLDPPELEMEPV
SIO_010081: RABAC1
subclass of: SO_0000673
so part of: RABAC1
location: join(77386..77450,85672..85851,90545..90642,91130..91231,93566..93630,94337..94351)
location: region:77386-94351:1
so has part: feature:77386-77450:1:exon
so has part: feature:85672-85851:1:exon
so has part: feature:90545-90642:1:exon
so has part: feature:91130-91231:1:exon
so has part: feature:93566-93630:1:exon
so has part: feature:94337-94351:1:exon

XP_032940368.1
type: Protein
SIO_000068: ncbiprotein

position:77386:1
position: 77386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94351:1
position: 94351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77386-77450:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:85672-85851:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90545-90642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91130-91231:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:93566-93630:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94337-94351:1:exon

RABAC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: RABAC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prenylated Rab acceptor protein 1 isoform X3
translation: MAEAAPPPQELRDSDPRGGLGRVTQWLEARRAALRPWGSFLDQRRFGAPRDLGELWRRLGHNGERFQSNYVVLFLGLVAYCLITSPLLLLALGVFVGAAVAVRVRAREAPLVLLGRELSPAHQLGVAAGVSLPLFWLAGAGSAVFWVLGAALVFLGSHAAFRQLDPPELEMEPV
SIO_010081: RABAC1
subclass of: SO_0000673
so part of: RABAC1
location: join(77386..77450,85672..85851,90545..90642,91130..91231,93566..93630,93878..93892)
location: region:77386-93892:1
so has part: feature:77386-77450:1:exon
so has part: feature:85672-85851:1:exon
so has part: feature:90545-90642:1:exon
so has part: feature:91130-91231:1:exon
so has part: feature:93566-93630:1:exon
so has part: feature:93878-93892:1:exon

XP_032940369.1
type: Protein
SIO_000068: ncbiprotein

position:93892:1
position: 93892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77386-77450:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:85672-85851:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90545-90642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91130-91231:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:93566-93630:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:93878-93892:1:exon

RABAC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: RABAC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prenylated Rab acceptor protein 1 isoform X4
translation: MAEAAPPPQELRDSDPRGGLGRVTQWLEARRAALRPWGSFLDQRRFGAPRDLGELWRRLGHNGERFQSNYVVLFLGLVAYCLITSPLLLLALGVFVGAAVAVRVRAREAPLVLLGRELSPAHQLGVAAGVSLPLFWLAGAGSAVFWVLGAALVFLGSHAAFRQLDPPELEMEPV
SIO_010081: RABAC1
subclass of: SO_0000673
so part of: RABAC1
location: join(77386..77450,85672..85851,90545..90642,91130..91231,93566..93630,93721..93735)
location: region:77386-93735:1
so has part: feature:77386-77450:1:exon
so has part: feature:85672-85851:1:exon
so has part: feature:90545-90642:1:exon
so has part: feature:91130-91231:1:exon
so has part: feature:93566-93630:1:exon
so has part: feature:93721-93735:1:exon

XP_032940370.1
type: Protein
SIO_000068: ncbiprotein

position:93735:1
position: 93735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77386-77450:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:85672-85851:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90545-90642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91130-91231:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:93566-93630:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:93721-93735:1:exon

RABAC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: RABAC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prenylated Rab acceptor protein 1 isoform X1
translation: MAEAAPPPQELRDSDPRGGLGRVTQWLEARRAALRPWGSFLDQRRFGAPRDLGELWRRLGHNGERFQSNYVVLFLGLVAYCLITSPLLLLALGVFVGAAVAVRVRAREAPLVLLGRELSPAHQLGVAAGVSLPLFWLAGAGSAVFWVLGAALVFLGSHAAFRQLDPPELEMEPV
SIO_010081: RABAC1
subclass of: SO_0000673
so part of: RABAC1
location: join(77386..77450,85672..85851,90545..90642,91130..91231,93566..93645)
location: region:77386-93645:1
so has part: feature:77386-77450:1:exon
so has part: feature:85672-85851:1:exon
so has part: feature:90545-90642:1:exon
so has part: feature:91130-91231:1:exon
so has part: feature:93566-93645:1:exon

XP_032940367.1
type: Protein
SIO_000068: ncbiprotein

position:93645:1
position: 93645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77386-77450:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:85672-85851:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90545-90642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91130-91231:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:93566-93645:1:exon

ATP1A3
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: ATP1A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(96212..143481)
location: region:96212-143481:-1
so has part: feature:96212-143481:-1:exon
subclass of: SO_0000010

117010197
type: Gene
SIO_000068: ncbigene

position:96212:-1
position: 96212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143481:-1
position: 143481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96212-143481:-1:exon

ATP1A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ATP1A3
product: ATPase Na+/K+ transporting subunit alpha 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033084483.2
SIO_010081: ATP1A3
subclass of: SO_0000673
so part of: ATP1A3
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ATP1A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ATP1A3
product: ATPase Na+/K+ transporting subunit alpha 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033084481.2
SIO_010081: ATP1A3
subclass of: SO_0000673
so part of: ATP1A3
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location: region:96212-143481:-1
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urn:…
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ATP1A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ATP1A3
product: ATPase Na+/K+ transporting subunit alpha 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 11 ESTs, 54 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033084482.2
SIO_010081: ATP1A3
subclass of: SO_0000673
so part of: ATP1A3
location: complement(join(96212..96319,97287..97378,99537..99638,101942..102072,103501..103646,106034..106157,107728..107882,109002..109170,112267..112417,113193..113329,114971..115146,117979..118171,118856..118990,120231..120340,121991..122189,124643..124911,127894..128011,128909..129043,130535..130648,132721..132924,134280..134339,134918..135040,143321..143481))
location: region:96212-143481:-1
so has part: feature:143321-143481:-1:exon
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urn:…
SIO_000300: 1
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position:113193:-1
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reference: sequence
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urn:…
SIO_000300: 15
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ATP1A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ATP1A3
product: ATPase Na+/K+ transporting subunit alpha 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033084484.2
SIO_010081: ATP1A3
subclass of: SO_0000673
so part of: ATP1A3
location: complement(join(96212..96319,97287..97378,99537..99638,101942..102072,103501..103646,106034..106157,107728..107882,109002..109170,112267..112417,113081..113124,113237..113329,114971..115146,116475..116551))
location: region:96212-116551:-1
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position:116551:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:116475-116551:-1:exon

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reference: sequence
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urn:…
SIO_000300: 2
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SIO_000300: 8
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urn:…
SIO_000300: 12
SIO_000628: feature:97287-97378:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:96212-96319:-1:exon

ATP1A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ATP1A3
product: ATPase Na+/K+ transporting subunit alpha 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033084488.2
SIO_010081: ATP1A3
subclass of: SO_0000673
so part of: ATP1A3
location: complement(join(96212..96319,97287..97378,99537..99638,101942..102072,103501..103646,106034..106157,107277..107338))
location: region:96212-107338:-1
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so has part: feature:99537-99638:-1:exon
so has part: feature:97287-97378:-1:exon
so has part: feature:96212-96319:-1:exon

position:107338:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107277-107338:-1:exon

position:107277:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
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SIO_000300: 3
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urn:…
SIO_000300: 7
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ATP1A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ATP1A3
product: ATPase Na+/K+ transporting subunit alpha 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033084487.2
SIO_010081: ATP1A3
subclass of: SO_0000673
so part of: ATP1A3
location: complement(join(96212..96319,97287..97378,99537..99638,101942..102072,103501..103646,104568..104586))
location: region:96212-104586:-1
so has part: feature:104568-104586:-1:exon
so has part: feature:103501-103646:-1:exon
so has part: feature:101942-102072:-1:exon
so has part: feature:99537-99638:-1:exon
so has part: feature:97287-97378:-1:exon
so has part: feature:96212-96319:-1:exon

position:104586:-1
position: 104586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104568-104586:-1:exon

position:104568:-1
position: 104568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:103501-103646:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:101942-102072:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99537-99638:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97287-97378:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:96212-96319:-1:exon

ATP1A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ATP1A3
product: ATPase Na+/K+ transporting subunit alpha 3, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033084489.2
SIO_010081: ATP1A3
subclass of: SO_0000673
so part of: ATP1A3
location: complement(join(96212..96319,97287..97378,99537..99638,101942..102072,103501..103646,104277..104313))
location: region:96212-104313:-1
so has part: feature:104277-104313:-1:exon
so has part: feature:103501-103646:-1:exon
so has part: feature:101942-102072:-1:exon
so has part: feature:99537-99638:-1:exon
so has part: feature:97287-97378:-1:exon
so has part: feature:96212-96319:-1:exon

position:104313:-1
position: 104313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104277-104313:-1:exon

position:104277:-1
position: 104277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:103501-103646:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:101942-102072:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99537-99638:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97287-97378:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:96212-96319:-1:exon

ATP1A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ATP1A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/potassium-transporting ATPase subunit alpha-3 isoform X3
translation: MGDKGGDKESPKKGKSKTRDLDDLKKEVAMTEHKMSIEEVCRKYNTDCVQGLTHSKAQEILARDGPNALTPPPTTPEWVKFCRQLFGGFSILLWIGAILCFLAYGIQAGTEDEPSNDNLYLGIVLAAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIREGEKMQVNAEEVVVGDLVEVKGGDRVPADLRIISAHGCKVDNSSLTGESEPQTRSPDCTHDNPLETRNITFFSTNCVEGTARGVVIATGDRTVMGRIATLASGLEVGKTPIAVEIEHFIQLITGVAVFLGISFFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGTAFDKSSPTWVALSHIAGLCNRAVFKGGQENVPILKRDVAGDASESALLKCIELSSGSVKVMRERNKKVAEIPFNSTNKYQLSIHETEDPNDNRYLLVMKGAPERILDRCSTILLQGKEQPLDEEMKEAFQNAYLELGGLGERVLGFCHFYLPEEQYPKGFAFDCDDVNFATDNLCFVGLMSMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVIHGTDLKDMSSEQIDEILQNHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFIMANIPLPLGTITILCIDLGTDMVPAISLAYEAAESDIMKRQPRNPRSDKLVNERLISMAYGQIGMIQALGGFFAYFVILAENGFLPSCLVGIRLRWDDRTINDLEDSYGQQWTYEQRKVVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMDVALRMYPLKPSWWFCAFPYSFLIFVYDEIRKLILRRNPGGWVEKETYY
SIO_010081: ATP1A3
subclass of: SO_0000673
so part of: ATP1A3
location: complement(join(96291..96319,97287..97378,99537..99638,101942..102072,103501..103646,106034..106157,107728..107882,109002..109170,112267..112417,113081..113124,113237..113329,114971..115146,117979..118171,118856..118990,120231..120340,121991..122189,124643..124911,127894..128011,128909..129043,130535..130648,132721..132924,134280..134339,134918..135001,143321..143326))
location: region:96291-143326:-1
so has part: feature:143321-143326:-1:exon
so has part: feature:134918-135001:-1:exon
so has part: feature:134280-134339:-1:exon
so has part: feature:132721-132924:-1:exon
so has part: feature:130535-130648:-1:exon
so has part: feature:128909-129043:-1:exon
so has part: feature:127894-128011:-1:exon
so has part: feature:124643-124911:-1:exon
so has part: feature:121991-122189:-1:exon
so has part: feature:120231-120340:-1:exon
so has part: feature:118856-118990:-1:exon
so has part: feature:117979-118171:-1:exon
so has part: feature:114971-115146:-1:exon
so has part: feature:113237-113329:-1:exon
so has part: feature:113081-113124:-1:exon
so has part: feature:112267-112417:-1:exon
so has part: feature:109002-109170:-1:exon
so has part: feature:107728-107882:-1:exon
so has part: feature:106034-106157:-1:exon
so has part: feature:103501-103646:-1:exon
so has part: feature:101942-102072:-1:exon
so has part: feature:99537-99638:-1:exon
so has part: feature:97287-97378:-1:exon
so has part: feature:96291-96319:-1:exon

XP_032940374.1
type: Protein
SIO_000068: ncbiprotein

position:96291:-1
position: 96291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143326:-1
position: 143326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143321-143326:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134918-135001:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:134280-134339:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132721-132924:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:130535-130648:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:128909-129043:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:127894-128011:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:124643-124911:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:121991-122189:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:120231-120340:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:118856-118990:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:117979-118171:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:114971-115146:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:113237-113329:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:113081-113124:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:112267-112417:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:109002-109170:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:107728-107882:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:106034-106157:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:103501-103646:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:101942-102072:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:99537-99638:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:97287-97378:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:96291-96319:-1:exon

ATP1A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ATP1A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/potassium-transporting ATPase subunit alpha-3 isoform X2
translation: MGFGGSDSYRVATTQDKGGDKESPKKGKSKTRDLDDLKKEVAMTEHKMSIEEVCRKYNTDCVQGLTHSKAQEILARDGPNALTPPPTTPEWVKFCRQLFGGFSILLWIGAILCFLAYGIQAGTEDEPSNDNLYLGIVLAAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIREGEKMQVNAEEVVVGDLVEVKGGDRVPADLRIISAHGCKVDNSSLTGESEPQTRSPDCTHDNPLETRNITFFSTNCVEGTARGVVIATGDRTVMGRIATLASGLEVGKTPIAVEIEHFIQLITGVAVFLGISFFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGTAFDKSSPTWVALSHIAGLCNRAVFKGGQENVPILKRDVAGDASESALLKCIELSSGSVKVMRERNKKVAEIPFNSTNKYQLSIHETEDPNDNRYLLVMKGAPERILDRCSTILLQGKEQPLDEEMKEAFQNAYLELGGLGERVLGFCHFYLPEEQYPKGFAFDCDDVNFATDNLCFVGLMSMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVIHGTDLKDMSSEQIDEILQNHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFIMANIPLPLGTITILCIDLGTDMVPAISLAYEAAESDIMKRQPRNPRSDKLVNERLISMAYGQIGMIQALGGFFAYFVILAENGFLPSCLVGIRLRWDDRTINDLEDSYGQQWTYEQRKVVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMDVALRMYPLKPSWWFCAFPYSFLIFVYDEIRKLILRRNPGGWVEKETYY
SIO_010081: ATP1A3
subclass of: SO_0000673
so part of: ATP1A3
location: complement(join(96291..96319,97287..97378,99537..99638,101942..102072,103501..103646,106034..106157,107728..107882,109002..109170,112267..112417,113081..113124,113237..113329,114971..115146,117979..118171,118856..118990,120231..120340,121991..122189,124643..124911,127894..128011,128909..129043,130535..130648,132721..132924,134280..134339,134918..135040,143321..143326))
location: region:96291-143326:-1
so has part: feature:143321-143326:-1:exon
so has part: feature:134918-135040:-1:exon
so has part: feature:134280-134339:-1:exon
so has part: feature:132721-132924:-1:exon
so has part: feature:130535-130648:-1:exon
so has part: feature:128909-129043:-1:exon
so has part: feature:127894-128011:-1:exon
so has part: feature:124643-124911:-1:exon
so has part: feature:121991-122189:-1:exon
so has part: feature:120231-120340:-1:exon
so has part: feature:118856-118990:-1:exon
so has part: feature:117979-118171:-1:exon
so has part: feature:114971-115146:-1:exon
so has part: feature:113237-113329:-1:exon
so has part: feature:113081-113124:-1:exon
so has part: feature:112267-112417:-1:exon
so has part: feature:109002-109170:-1:exon
so has part: feature:107728-107882:-1:exon
so has part: feature:106034-106157:-1:exon
so has part: feature:103501-103646:-1:exon
so has part: feature:101942-102072:-1:exon
so has part: feature:99537-99638:-1:exon
so has part: feature:97287-97378:-1:exon
so has part: feature:96291-96319:-1:exon

XP_032940372.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143321-143326:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134918-135040:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:134280-134339:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132721-132924:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:130535-130648:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:128909-129043:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:127894-128011:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:124643-124911:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:121991-122189:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:120231-120340:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:118856-118990:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:117979-118171:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:114971-115146:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:113237-113329:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:113081-113124:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:112267-112417:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:109002-109170:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:107728-107882:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:106034-106157:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:103501-103646:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:101942-102072:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:99537-99638:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:97287-97378:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:96291-96319:-1:exon

ATP1A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ATP1A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/potassium-transporting ATPase subunit alpha-3 isoform X1
translation: MGFGGSDSYRVATTQDKGGDKESPKKGKSKTRDLDDLKKEVAMTEHKMSIEEVCRKYNTDCVQGLTHSKAQEILARDGPNALTPPPTTPEWVKFCRQLFGGFSILLWIGAILCFLAYGIQAGTEDEPSNDNLYLGIVLAAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIREGEKMQVNAEEVVVGDLVEVKGGDRVPADLRIISAHGCKVDNSSLTGESEPQTRSPDCTHDNPLETRNITFFSTNCVEGTARGVVIATGDRTVMGRIATLASGLEVGKTPIAVEIEHFIQLITGVAVFLGISFFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGTAFDKSSPTWVALSHIAGLCNRAVFKGGQENVPILKRDVAGDASESALLKCIELSSGSVKVMRERNKKVAEIPFNSTNKYQLSIHETEDPNDNRYLLVMKGAPERILDRCSTILLQGKEQPLDEEMKEAFQNAYLELGGLGERVLGFCHFYLPEEQYPKGFAFDCDDVNFATDNLCFVGLMSMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVIHGTDLKDMSSEQIDEILQNHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFIMANIPLPLGTITILCIDLGTDMVPAISLAYEAAESDIMKRQPRNPRSDKLVNERLISMAYGQIGMIQALGGFFAYFVILAENGFLPSCLVGIRLRWDDRTINDLEDSYGQQWTYEQRKVVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMDVALRMYPLKPSWWFCAFPYSFLIFVYDEIRKLILRRNPGGWVEKETYY
SIO_010081: ATP1A3
subclass of: SO_0000673
so part of: ATP1A3
location: complement(join(96291..96319,97287..97378,99537..99638,101942..102072,103501..103646,106034..106157,107728..107882,109002..109170,112267..112417,113193..113329,114971..115146,117979..118171,118856..118990,120231..120340,121991..122189,124643..124911,127894..128011,128909..129043,130535..130648,132721..132924,134280..134339,134918..135040,143321..143326))
location: region:96291-143326:-1
so has part: feature:143321-143326:-1:exon
so has part: feature:134918-135040:-1:exon
so has part: feature:134280-134339:-1:exon
so has part: feature:132721-132924:-1:exon
so has part: feature:130535-130648:-1:exon
so has part: feature:128909-129043:-1:exon
so has part: feature:127894-128011:-1:exon
so has part: feature:124643-124911:-1:exon
so has part: feature:121991-122189:-1:exon
so has part: feature:120231-120340:-1:exon
so has part: feature:118856-118990:-1:exon
so has part: feature:117979-118171:-1:exon
so has part: feature:114971-115146:-1:exon
so has part: feature:113193-113329:-1:exon
so has part: feature:112267-112417:-1:exon
so has part: feature:109002-109170:-1:exon
so has part: feature:107728-107882:-1:exon
so has part: feature:106034-106157:-1:exon
so has part: feature:103501-103646:-1:exon
so has part: feature:101942-102072:-1:exon
so has part: feature:99537-99638:-1:exon
so has part: feature:97287-97378:-1:exon
so has part: feature:96291-96319:-1:exon

XP_032940373.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143321-143326:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134918-135040:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:134280-134339:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132721-132924:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:130535-130648:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:128909-129043:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:127894-128011:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:124643-124911:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:121991-122189:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:120231-120340:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:118856-118990:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:117979-118171:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:114971-115146:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:113193-113329:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:112267-112417:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:109002-109170:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:107728-107882:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:106034-106157:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:103501-103646:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:101942-102072:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:99537-99638:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:97287-97378:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:96291-96319:-1:exon

ATP1A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ATP1A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/potassium-transporting ATPase subunit alpha-3 isoform X4
translation: MKEQFQNAYLELGGLGERVLGFCHFYLPEEQYPKGFAFDCDDVNFATDNLCFVGLMSMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVIHGTDLKDMSSEQIDEILQNHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFIMANIPLPLGTITILCIDLGTDMVPAISLAYEAAESDIMKRQPRNPRSDKLVNERLISMAYGQIGMIQALGGFFAYFVILAENGFLPSCLVGIRLRWDDRTINDLEDSYGQQWTYEQRKVVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMDVALRMYPLKPSWWFCAFPYSFLIFVYDEIRKLILRRNPGGWVEKETYY
SIO_010081: ATP1A3
subclass of: SO_0000673
so part of: ATP1A3
location: complement(join(96291..96319,97287..97378,99537..99638,101942..102072,103501..103646,106034..106157,107728..107882,109002..109170,112267..112417,113081..113124,113237..113329,114971..115146,116475..116535))
location: region:96291-116535:-1
so has part: feature:116475-116535:-1:exon
so has part: feature:114971-115146:-1:exon
so has part: feature:113237-113329:-1:exon
so has part: feature:113081-113124:-1:exon
so has part: feature:112267-112417:-1:exon
so has part: feature:109002-109170:-1:exon
so has part: feature:107728-107882:-1:exon
so has part: feature:106034-106157:-1:exon
so has part: feature:103501-103646:-1:exon
so has part: feature:101942-102072:-1:exon
so has part: feature:99537-99638:-1:exon
so has part: feature:97287-97378:-1:exon
so has part: feature:96291-96319:-1:exon

XP_032940375.1
type: Protein
SIO_000068: ncbiprotein

position:116535:-1
position: 116535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116475-116535:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:114971-115146:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:113237-113329:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:113081-113124:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:112267-112417:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:109002-109170:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:107728-107882:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:106034-106157:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:103501-103646:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:101942-102072:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:99537-99638:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:97287-97378:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:96291-96319:-1:exon

ATP1A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ATP1A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/potassium-transporting ATPase subunit alpha-3 isoform X6
translation: MVPAISLAYEAAESDIMKRQPRNPRSDKLVNERLISMAYGQIGMIQALGGFFAYFVILAENGFLPSCLVGIRLRWDDRTINDLEDSYGQQWTYEQRKVVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMDVALRMYPLKPSWWFCAFPYSFLIFVYDEIRKLILRRNPGGWVEKETYY
SIO_010081: ATP1A3
subclass of: SO_0000673
so part of: ATP1A3
location: complement(join(96291..96319,97287..97378,99537..99638,101942..102072,103501..103646,106034..106157,107277..107279))
location: region:96291-107279:-1
so has part: feature:107277-107279:-1:exon
so has part: feature:106034-106157:-1:exon
so has part: feature:103501-103646:-1:exon
so has part: feature:101942-102072:-1:exon
so has part: feature:99537-99638:-1:exon
so has part: feature:97287-97378:-1:exon
so has part: feature:96291-96319:-1:exon

XP_032940379.1
type: Protein
SIO_000068: ncbiprotein

position:107279:-1
position: 107279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107277-107279:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106034-106157:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:103501-103646:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:101942-102072:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:99537-99638:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:97287-97378:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:96291-96319:-1:exon

ATP1A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ATP1A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/potassium-transporting ATPase subunit alpha-3 isoform X5
translation: MAYGQIGMIQALGGFFAYFVILAENGFLPSCLVGIRLRWDDRTINDLEDSYGQQWTYEQRKVVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMDVALRMYPLKPSWWFCAFPYSFLIFVYDEIRKLILRRNPGGWVEKETYY
SIO_010081: ATP1A3
subclass of: SO_0000673
so part of: ATP1A3
location: complement(join(96291..96319,97287..97378,99537..99638,101942..102072,103501..103646,104568..104586))
location: region:96291-104586:-1
so has part: feature:104568-104586:-1:exon
so has part: feature:103501-103646:-1:exon
so has part: feature:101942-102072:-1:exon
so has part: feature:99537-99638:-1:exon
so has part: feature:97287-97378:-1:exon
so has part: feature:96291-96319:-1:exon

XP_032940378.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:104568-104586:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:103501-103646:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:101942-102072:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99537-99638:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97287-97378:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:96291-96319:-1:exon

ATP1A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ATP1A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/potassium-transporting ATPase subunit alpha-3 isoform X7
translation: MAYGQIGMIQALGGFFAYFVILAENGFLPSCLVGIRLRWDDRTINDLEDSYGQQWTYEQRKVVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMDVALRMYPLKPSWWFCAFPYSFLIFVYDEIRKLILRRNPGGWVEKETYY
SIO_010081: ATP1A3
subclass of: SO_0000673
so part of: ATP1A3
location: complement(join(96291..96319,97287..97378,99537..99638,101942..102072,103501..103646,104277..104295))
location: region:96291-104295:-1
so has part: feature:104277-104295:-1:exon
so has part: feature:103501-103646:-1:exon
so has part: feature:101942-102072:-1:exon
so has part: feature:99537-99638:-1:exon
so has part: feature:97287-97378:-1:exon
so has part: feature:96291-96319:-1:exon

XP_032940380.1
type: Protein
SIO_000068: ncbiprotein

position:104295:-1
position: 104295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104277-104295:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:103501-103646:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:101942-102072:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99537-99638:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97287-97378:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:96291-96319:-1:exon

GRIK5
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: GRIK5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(146771..175410)
location: region:146771-175410:-1
so has part: feature:146771-175410:-1:exon
subclass of: SO_0000010

117010163
type: Gene
SIO_000068: ncbigene

position:146771:-1
position: 146771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175410:-1
position: 175410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146771-175410:-1:exon

GRIK5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: GRIK5
product: glutamate ionotropic receptor kainate type subunit 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 103 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084420.1
SIO_010081: GRIK5
subclass of: SO_0000673
so part of: GRIK5
location: complement(join(146771..147208,148894..149015,149842..149970,150669..150894,151957..152122,153063..153236,154735..154844,156588..156701,158851..159045,161586..161693,162545..162649,163535..163687,165509..165670,166940..166993,168440..168618,171198..171363,172214..172311,173010..173174,175407..175410))
location: region:146771-175410:-1
so has part: feature:175407-175410:-1:exon
so has part: feature:173010-173174:-1:exon
so has part: feature:172214-172311:-1:exon
so has part: feature:171198-171363:-1:exon
so has part: feature:168440-168618:-1:exon
so has part: feature:166940-166993:-1:exon
so has part: feature:165509-165670:-1:exon
so has part: feature:163535-163687:-1:exon
so has part: feature:162545-162649:-1:exon
so has part: feature:161586-161693:-1:exon
so has part: feature:158851-159045:-1:exon
so has part: feature:156588-156701:-1:exon
so has part: feature:154735-154844:-1:exon
so has part: feature:153063-153236:-1:exon
so has part: feature:151957-152122:-1:exon
so has part: feature:150669-150894:-1:exon
so has part: feature:149842-149970:-1:exon
so has part: feature:148894-149015:-1:exon
so has part: feature:146771-147208:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:175407-175410:-1:exon

position:175407:-1
position: 175407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:173010-173174:-1:exon

position:173010:-1
position: 173010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173174:-1
position: 173174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:172214-172311:-1:exon

position:172214:-1
position: 172214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172311:-1
position: 172311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:171198-171363:-1:exon

position:171198:-1
position: 171198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171363:-1
position: 171363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:168440-168618:-1:exon

position:168440:-1
position: 168440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168618:-1
position: 168618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:166940-166993:-1:exon

position:166940:-1
position: 166940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166993:-1
position: 166993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:165509-165670:-1:exon

position:165509:-1
position: 165509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165670:-1
position: 165670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:163535-163687:-1:exon

position:163535:-1
position: 163535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163687:-1
position: 163687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:162545-162649:-1:exon

position:162545:-1
position: 162545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162649:-1
position: 162649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:161586-161693:-1:exon

position:161586:-1
position: 161586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161693:-1
position: 161693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:158851-159045:-1:exon

position:158851:-1
position: 158851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159045:-1
position: 159045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:156588-156701:-1:exon

position:156588:-1
position: 156588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156701:-1
position: 156701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:154735-154844:-1:exon

position:154735:-1
position: 154735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154844:-1
position: 154844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:153063-153236:-1:exon

position:153063:-1
position: 153063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153236:-1
position: 153236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:151957-152122:-1:exon

position:151957:-1
position: 151957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152122:-1
position: 152122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:150669-150894:-1:exon

position:150669:-1
position: 150669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150894:-1
position: 150894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:149842-149970:-1:exon

position:149842:-1
position: 149842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149970:-1
position: 149970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:148894-149015:-1:exon

position:148894:-1
position: 148894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149015:-1
position: 149015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:146771-147208:-1:exon

position:147208:-1
position: 147208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GRIK5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: GRIK5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor ionotropic, kainate 5
translation: MAAILDERGGCGRGERLALALARERVNGPGGGRPPARLEVEVFELSRDNQYETTDTMCQILPKGVVSVLGPAASPAAAATVSHICGEKEIPHIRVGPEDAPRPPLLRLASLSLYPSNEDVSQALGGLLRSLRAPPASLICAQAECLLRLEELVRQFLISRESLSVRVLDAEQDPTPLLKEIRDDKVPTIIIDGSAATAGLVLAKASELGMTSTFYKYILTTMDFPLLRLDALPAAPATVLGFSMFNTSHGFYPEFVRSLNMSWRESCELGPYPGPALSAALLFDAVHVVVGAVRELNRSQEIGGRALGCAAPGIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYSLRVLEKGRDGHREVGVWFSNRTLAMDEATLALNASDSLANKTLIITTILENPYVMRVSGASGPDRFEGFCVDMLRELAALLKFRFHIKLVEDGLYGAPEPNGSWTGMVGELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHLGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPHPCLRERPGLVENQYTLGNSLWFPVGGFLQQGAEVLPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGSTMTFFQNSRYQTYQRMWNYMHSKQPSVFVKSTEEGIARVLNSKYAFLLESTMNEYHRRHNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQENNRLEILKRKWWEGGHCPKEEDHRAKGLGMENIGGIFVVLVCGLLVAILVAVMEFVWSTRRAADTQELSLCSEMLRELGRAVSCSRRPRARRRRRPPRGAPPPPHPHPHPLPHPPLREMRFSNGKLYSGGGGAHLEAAGGGGAAPPAPPPPCAHVRVCPECRRIQALRATPPPPSRTAGGGAAPPPPPPATPQPLPPPAEGGARTAE
SIO_010081: GRIK5
subclass of: SO_0000673
so part of: GRIK5
location: complement(join(146786..147208,148894..149015,149842..149970,150669..150894,151957..152122,153063..153236,154735..154844,156588..156701,158851..159045,161586..161693,162545..162649,163535..163687,165509..165670,166940..166993,168440..168618,171198..171363,172214..172311,173010..173174,175407..175410))
location: region:146786-175410:-1
so has part: feature:175407-175410:-1:exon
so has part: feature:173010-173174:-1:exon
so has part: feature:172214-172311:-1:exon
so has part: feature:171198-171363:-1:exon
so has part: feature:168440-168618:-1:exon
so has part: feature:166940-166993:-1:exon
so has part: feature:165509-165670:-1:exon
so has part: feature:163535-163687:-1:exon
so has part: feature:162545-162649:-1:exon
so has part: feature:161586-161693:-1:exon
so has part: feature:158851-159045:-1:exon
so has part: feature:156588-156701:-1:exon
so has part: feature:154735-154844:-1:exon
so has part: feature:153063-153236:-1:exon
so has part: feature:151957-152122:-1:exon
so has part: feature:150669-150894:-1:exon
so has part: feature:149842-149970:-1:exon
so has part: feature:148894-149015:-1:exon
so has part: feature:146786-147208:-1:exon

XP_032940311.1
type: Protein
SIO_000068: ncbiprotein

position:146786:-1
position: 146786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175407-175410:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:173010-173174:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:172214-172311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171198-171363:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:168440-168618:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:166940-166993:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:165509-165670:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:163535-163687:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:162545-162649:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:161586-161693:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:158851-159045:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:156588-156701:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:154735-154844:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:153063-153236:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:151957-152122:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:150669-150894:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:149842-149970:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:148894-149015:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:146786-147208:-1:exon

ZNF574
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: ZNF574
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(182146..188844)
location: region:182146-188844:-1
so has part: feature:182146-188844:-1:exon
subclass of: SO_0000010

117010164
type: Gene
SIO_000068: ncbigene

position:182146:-1
position: 182146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188844:-1
position: 188844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182146-188844:-1:exon

ZNF574
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ZNF574
product: zinc finger protein 574
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084422.1
SIO_010081: ZNF574
subclass of: SO_0000673
so part of: ZNF574
location: complement(join(182146..182229,182869..183350,184653..186789,188809..188844))
location: region:182146-188844:-1
so has part: feature:188809-188844:-1:exon
so has part: feature:184653-186789:-1:exon
so has part: feature:182869-183350:-1:exon
so has part: feature:182146-182229:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:188809-188844:-1:exon

position:188809:-1
position: 188809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:184653-186789:-1:exon

position:184653:-1
position: 184653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186789:-1
position: 186789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:182869-183350:-1:exon

position:182869:-1
position: 182869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183350:-1
position: 183350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:182146-182229:-1:exon

position:182229:-1
position: 182229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF574
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ZNF574
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 574
translation: MSSPEETLLLVEHRYVCSECSHLSPSLEEALLHHQQHLQAPPPAQVSPQVSPAPGPAHLELLGVPAELETPSQFQCLECGALLVTPGQLLEHQELHLKLLGTPSDPPKPPQNPGIHFECPECRALFQSQELWLAHRQSHRNPQNPPQNHARVDVEHSYRKPEDGDTNPEIPTEIPADPPAESAVQLLLYECGECLQLFQSPKDFLEHQVTHLAPAPAPPPPPSQPPELRCQQCRELLPSARLLRAHLRCHALGQFRCPLCPRVLPDPGELRRHRAGHSRDSLFLCLDCGLALDTEAALLAHRRAHGAEPLHRCGVCGKTFASMTKFLYHRRSHAAPGPLPLPEPPLDPPNPGLACGMCPKSFPNAAALSRHQRFVHRLERRHRCGACGKMFKKASHLRNHARTHTGERPYGCRQCGRGFNSQANLLRHQLTHTGERPHECPECHKRFAQTSTLRQHLQVHLRRFPHRCGECGLRFHRPHRLLLHRAHHTGEYPYKCPQCGRSFLLRRLLDVHLLGHAGRQPQVCQGCGAAFAGAAALREHRCGKSGWKFECGVCGKKSGTAARLRAHERIHGAVTQSEAGQAVSEVVSEVVTAPKQRRSGGKNLECEDCKKLFSTETSLQVHRRIHTGERPYPCPECGKAFRQSTHLKDHRRLHTGERPFRCGDCGKAFAIAVRLAEHRRIHTGERPYGCQECGKAYRSFSNLWKHRKMHRGVHVETPMEIPETPGVGLGSQIPVQIPETPQETLEMGLGAQIPVETPETPKDTLKMGLGSSVHGETPETPQETLEMGLGSQIHAETPVETPKETLMVGLGAQIHGERPVQIPEDPKETLILGSGSSVHGETPVETPKDTLGVGLGAQIHEEGLSETPKETLRDQELPKTSPEPPQDPPGTLPDPPRAQE
SIO_010081: ZNF574
subclass of: SO_0000673
so part of: ZNF574
location: complement(join(182146..182229,182869..183350,184653..186789))
location: region:182146-186789:-1
so has part: feature:184653-186789:-1:exon
so has part: feature:182869-183350:-1:exon
so has part: feature:182146-182229:-1:exon

XP_032940313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184653-186789:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:182869-183350:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:182146-182229:-1:exon

POU2F2
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: POU2F2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(197899..226314)
location: region:197899-226314:-1
so has part: feature:197899-226314:-1:exon
subclass of: SO_0000010

117010165
type: Gene
SIO_000068: ncbigene

position:197899:-1
position: 197899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226314:-1
position: 226314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197899-226314:-1:exon

POU2F2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: POU2F2
product: POU class 2 homeobox 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 66% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084423.1
SIO_010081: POU2F2
subclass of: SO_0000673
so part of: POU2F2
location: complement(join(197899..197921,198968..199025,200582..200878,202287..202438,204227..204368,205953..206090,209911..210002,211067..211172,215665..215862,222714..222770,222861..222892,223847..223900,226287..226314))
location: region:197899-226314:-1
so has part: feature:226287-226314:-1:exon
so has part: feature:223847-223900:-1:exon
so has part: feature:222861-222892:-1:exon
so has part: feature:222714-222770:-1:exon
so has part: feature:215665-215862:-1:exon
so has part: feature:211067-211172:-1:exon
so has part: feature:209911-210002:-1:exon
so has part: feature:205953-206090:-1:exon
so has part: feature:204227-204368:-1:exon
so has part: feature:202287-202438:-1:exon
so has part: feature:200582-200878:-1:exon
so has part: feature:198968-199025:-1:exon
so has part: feature:197899-197921:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:226287-226314:-1:exon

position:226287:-1
position: 226287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:223847-223900:-1:exon

position:223847:-1
position: 223847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223900:-1
position: 223900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:222861-222892:-1:exon

position:222861:-1
position: 222861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222892:-1
position: 222892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:222714-222770:-1:exon

position:222714:-1
position: 222714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222770:-1
position: 222770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:215665-215862:-1:exon

position:215665:-1
position: 215665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215862:-1
position: 215862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:211067-211172:-1:exon

position:211067:-1
position: 211067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211172:-1
position: 211172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:209911-210002:-1:exon

position:209911:-1
position: 209911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210002:-1
position: 210002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:205953-206090:-1:exon

position:205953:-1
position: 205953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206090:-1
position: 206090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:204227-204368:-1:exon

position:204227:-1
position: 204227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204368:-1
position: 204368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:202287-202438:-1:exon

position:202287:-1
position: 202287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202438:-1
position: 202438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:200582-200878:-1:exon

position:200582:-1
position: 200582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200878:-1
position: 200878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:198968-199025:-1:exon

position:198968:-1
position: 198968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199025:-1
position: 199025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:197899-197921:-1:exon

position:197921:-1
position: 197921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

POU2F2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: POU2F2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: POU domain, class 2, transcription factor 2
translation: MVNPNIWASELRMSKPLELEKEPGERPEPEPDGPDTNQAQPKPLPPFGPAPPGPGAKLAALLPSPPQLLAQAQLLAAAAAQLPQGPSPTPPAPAPPPPPAGTPPAPPPPPALPLPGPIQLSAQDLQQLLQLQQLVLVPGPPLQPPPQFLLSPPGQAQTGLLPPPNLFQLPQHSPGGLLPNPPRGGLHAQAGPRAGVPEPPKVPEGAPEEPSSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLETWLRDAETMSVDSSLPSPPSLGPSPLGAFEGLPGRRRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRINPTNPQNPQNPPNPPQNPPQNPPQSLAQNLVQNLTQNLPNLTQNLAPNLAPNLAKGAAFAHTVTPPGSALGLPAPGGLGTAGVIDRCQ
SIO_010081: POU2F2
subclass of: SO_0000673
so part of: POU2F2
location: complement(join(197899..197921,198968..199025,200582..200878,202287..202438,204227..204368,205953..206090,209911..210002,211067..211172,215665..215862,222714..222770,222861..222892,223847..223900,226287..226314))
location: region:197899-226314:-1
so has part: feature:226287-226314:-1:exon
so has part: feature:223847-223900:-1:exon
so has part: feature:222861-222892:-1:exon
so has part: feature:222714-222770:-1:exon
so has part: feature:215665-215862:-1:exon
so has part: feature:211067-211172:-1:exon
so has part: feature:209911-210002:-1:exon
so has part: feature:205953-206090:-1:exon
so has part: feature:204227-204368:-1:exon
so has part: feature:202287-202438:-1:exon
so has part: feature:200582-200878:-1:exon
so has part: feature:198968-199025:-1:exon
so has part: feature:197899-197921:-1:exon

XP_032940314.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:226287-226314:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:223847-223900:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:222861-222892:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:222714-222770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215665-215862:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:211067-211172:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:209911-210002:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:205953-206090:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:204227-204368:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:202287-202438:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:200582-200878:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:198968-199025:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:197899-197921:-1:exon

DEDD2
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: DEDD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(236755..244788)
location: region:236755-244788:-1
so has part: feature:236755-244788:-1:exon
subclass of: SO_0000010

117010166
type: Gene
SIO_000068: ncbigene

position:236755:-1
position: 236755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244788:-1
position: 244788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236755-244788:-1:exon

DEDD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: DEDD2
product: death effector domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_042780131.1
SIO_010081: DEDD2
subclass of: SO_0000673
so part of: DEDD2
location: complement(join(236755..237221,237273..237297,237388..237444,237689..237835,238945..239199,240041..240127,241676..242153,244715..244788))
location: region:236755-244788:-1
so has part: feature:244715-244788:-1:exon
so has part: feature:241676-242153:-1:exon
so has part: feature:240041-240127:-1:exon
so has part: feature:238945-239199:-1:exon
so has part: feature:237689-237835:-1:exon
so has part: feature:237388-237444:-1:exon
so has part: feature:237273-237297:-1:exon
so has part: feature:236755-237221:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:244715-244788:-1:exon

position:244715:-1
position: 244715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:241676-242153:-1:exon

position:241676:-1
position: 241676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242153:-1
position: 242153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:240041-240127:-1:exon

position:240041:-1
position: 240041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240127:-1
position: 240127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:238945-239199:-1:exon

position:238945:-1
position: 238945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239199:-1
position: 239199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:237689-237835:-1:exon

position:237689:-1
position: 237689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237835:-1
position: 237835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:237388-237444:-1:exon

position:237388:-1
position: 237388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237444:-1
position: 237444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:237273-237297:-1:exon

position:237273:-1
position: 237273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237297:-1
position: 237297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:236755-237221:-1:exon

position:237221:-1
position: 237221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DEDD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: DEDD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-binding death effector domain-containing protein 2
translation: MRGAIEGARRIRAAEPVPPPAVPSLSPRCPLTVESLRALSQLHSPLWGGGGDTNRDIAPPMSRHPRDEEEECLDYYGMVSLHRLFEVVAAQLSHSEVALLSLLLDQRLSRHEDGDSDVPKEGRRCHRAGTGLELLLELERRGLCHEGDLGTLRALLRAAARHDLLRCVTLRRARPVSPERPPCVPALGVTCPSHARPRPEHWDTGSSPAKRKRGARNSQNPQNSQNSQNPQNSRSNSRNSRKNSRNSRSSRSSRSSRSFRNSQNSRNSSRNSPRNPPQDPPEPPAKVTCDIRLRVRAECCEHERCACTGLYWSILVHTNLYSFILVYTGLYWFILVHTDIRLRVRAEHCEHECHTHTDIRLRVRADGPYWFILVYTGLYWFLTDIFLFLDIRLRVRAEYCEHDRALRRSVASSRPRGPGRALDVFGQASGVLKSRDLGSILCDIKFSELSYLEAFWGDYLSGALLEALKGVFLTEGLRRAVGREDVRLLVSVDQDDYERGRRRLLEAMQGRGG
SIO_010081: DEDD2
subclass of: SO_0000673
so part of: DEDD2
location: complement(join(236777..237221,237273..237297,237388..237444,237689..237835,238945..239199,240041..240127,241676..242153,244715..244762))
location: region:236777-244762:-1
so has part: feature:244715-244762:-1:exon
so has part: feature:241676-242153:-1:exon
so has part: feature:240041-240127:-1:exon
so has part: feature:238945-239199:-1:exon
so has part: feature:237689-237835:-1:exon
so has part: feature:237388-237444:-1:exon
so has part: feature:237273-237297:-1:exon
so has part: feature:236777-237221:-1:exon

XP_042636065.1
type: Protein
SIO_000068: ncbiprotein

position:236777:-1
position: 236777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244762:-1
position: 244762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244715-244762:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:241676-242153:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:240041-240127:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:238945-239199:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:237689-237835:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:237388-237444:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:237273-237297:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:236777-237221:-1:exon

ERF
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: ERF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<248423..258483)
location: region:248423-258483:-1
so has part: feature:248423-258483:-1:exon
subclass of: SO_0000010

117010167
type: Gene
SIO_000068: ncbigene

position:248423:-1
position: 248423
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:258483:-1
position: 258483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248423-258483:-1:exon

ERF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ERF
product: ETS2 repressor factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084425.1
SIO_010081: ERF
subclass of: SO_0000673
so part of: ERF
location: complement(join(<248423..249135,249305..249424,251469..251584,252113..252347,258441..258483))
location: region:248423-258483:-1
so has part: feature:258441-258483:-1:exon
so has part: feature:252113-252347:-1:exon
so has part: feature:251469-251584:-1:exon
so has part: feature:249305-249424:-1:exon
so has part: feature:248423-249135:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:258441-258483:-1:exon

position:258441:-1
position: 258441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:252113-252347:-1:exon

position:252113:-1
position: 252113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252347:-1
position: 252347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:251469-251584:-1:exon

position:251469:-1
position: 251469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251584:-1
position: 251584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:249305-249424:-1:exon

position:249305:-1
position: 249305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249424:-1
position: 249424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:248423-249135:-1:exon

position:249135:-1
position: 249135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ERF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ERF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ETS domain-containing transcription factor ERF
translation: MKTPADAGFAFPEWAYKAESSPGSRQIQLWHFILELLRQEQYREVIAWQGDYGEFVIKDPDEVARLWGVRKCKPHMNYDKLSRALRYYYNKRILHKTKGKRFTYKFNFNKLVLVNYPFIDLGLTGPPLPQSAPPLPTGGSHFRFPPLPGPSPTPPPPPPPPNPDGAGFRHLPAHPPPRLTPEGLFRLYPPREPPLSPFPPSPLGGGGGGGGGGEGGGGGGALLPPPPLSPARPLSPPHLAYIPSPTLSPLFGGSGGGGGGSGGGGGGGGGGGSHFSFSAEDLQRALAAQARSVLSYHLSPRAFLPCPPPALLLPHAPPPPPPHPHPPPPPPGHAPFPFKLQPPPPGRRQREKSGGGGAAPPPSSSSSSSSSSGGGGGAGKEQPPPHIKVEQVGEGEEVEVEE
SIO_010081: ERF
subclass of: SO_0000673
so part of: ERF
location: complement(join(<248423..249135,249305..249424,251469..251584,252113..252347,258441..258462))
location: region:248423-258462:-1
so has part: feature:258441-258462:-1:exon
so has part: feature:252113-252347:-1:exon
so has part: feature:251469-251584:-1:exon
so has part: feature:249305-249424:-1:exon
so has part: feature:248423-249135:-1:exon

XP_032940316.1
type: Protein
SIO_000068: ncbiprotein

position:258462:-1
position: 258462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258441-258462:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:252113-252347:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:251469-251584:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249305-249424:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:248423-249135:-1:exon

CIC
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: CIC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 260984..297125
location: region:260984-297125:1
so has part: feature:260984-297125:1:exon
subclass of: SO_0000010

117010168
type: Gene
SIO_000068: ncbigene

position:260984:1
position: 260984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297125:1
position: 297125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260984-297125:1:exon

CIC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CIC
product: capicua transcriptional repressor
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
transcript id: XM_033084426.1
SIO_010081: CIC
subclass of: SO_0000673
so part of: CIC
location: join(260984..262281,262623..262860,270938..271087,272975..273242,275370..275490,276386..276568,278420..278573,280675..280811,282093..282197,282228..282321,283071..283163,284280..284335,284922..285018,285730..285863,285950..285998,288662..288744,289082..289230,291039..291190,293256..293384,294332..294463,296776..297125)
location: region:260984-297125:1
so has part: feature:260984-262281:1:exon
so has part: feature:262623-262860:1:exon
so has part: feature:270938-271087:1:exon
so has part: feature:272975-273242:1:exon
so has part: feature:275370-275490:1:exon
so has part: feature:276386-276568:1:exon
so has part: feature:278420-278573:1:exon
so has part: feature:280675-280811:1:exon
so has part: feature:282093-282197:1:exon
so has part: feature:282228-282321:1:exon
so has part: feature:283071-283163:1:exon
so has part: feature:284280-284335:1:exon
so has part: feature:284922-285018:1:exon
so has part: feature:285730-285863:1:exon
so has part: feature:285950-285998:1:exon
so has part: feature:288662-288744:1:exon
so has part: feature:289082-289230:1:exon
so has part: feature:291039-291190:1:exon
so has part: feature:293256-293384:1:exon
so has part: feature:294332-294463:1:exon
so has part: feature:296776-297125:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:260984-262281:1:exon

position:262281:1
position: 262281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:262623-262860:1:exon

position:262623:1
position: 262623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262860:1
position: 262860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:270938-271087:1:exon

position:270938:1
position: 270938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271087:1
position: 271087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:272975-273242:1:exon

position:272975:1
position: 272975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273242:1
position: 273242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:275370-275490:1:exon

position:275370:1
position: 275370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275490:1
position: 275490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:276386-276568:1:exon

position:276386:1
position: 276386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276568:1
position: 276568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:278420-278573:1:exon

position:278420:1
position: 278420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278573:1
position: 278573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:280675-280811:1:exon

position:280675:1
position: 280675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280811:1
position: 280811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:282093-282197:1:exon

position:282093:1
position: 282093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282197:1
position: 282197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:282228-282321:1:exon

position:282228:1
position: 282228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282321:1
position: 282321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:283071-283163:1:exon

position:283071:1
position: 283071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283163:1
position: 283163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:284280-284335:1:exon

position:284280:1
position: 284280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284335:1
position: 284335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:284922-285018:1:exon

position:284922:1
position: 284922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285018:1
position: 285018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:285730-285863:1:exon

position:285730:1
position: 285730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285863:1
position: 285863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:285950-285998:1:exon

position:285950:1
position: 285950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285998:1
position: 285998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:288662-288744:1:exon

position:288662:1
position: 288662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288744:1
position: 288744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:289082-289230:1:exon

position:289082:1
position: 289082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289230:1
position: 289230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:291039-291190:1:exon

position:291039:1
position: 291039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291190:1
position: 291190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:293256-293384:1:exon

position:293256:1
position: 293256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293384:1
position: 293384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:294332-294463:1:exon

position:294332:1
position: 294332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294463:1
position: 294463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:296776-297125:1:exon

position:296776:1
position: 296776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CIC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CIC
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein capicua homolog
translation: MRAGVSRCPLPPPPSGDPSPVAPPAPFEAAFRRLRCHRVLALRDGVFRPAVLKQLRRGHELGVQFAGDRGVTFLPGGFLGDPPSVVLDATPPAAALAVGTAVCARLDPGGDAYRPGTVLEVSAKPPSYRVRFAPPPPAPPVWVPRSGLRLLRPPWPPGGEQGEEEEDELSSKLPEDAEVSKLSSPAPPRPVPPSSSSSSSSSSQPSGTPQPKYKKGDVVCTPNGIRKKFNGKQWRRLCSRDGCTKESQRRGFCSRHLSMRTKELEGLPENRPGPPAPRGGSADFEWGDETSRESDGDGRARLGAAHPAVVTAPNPDLSRFEFDECEAAVMLVSLGSSRSGTPSFSPASTQSPFSPTPSPSPSPLFGFRPANFSPVTASPRARGRHLSAGTPRPGEGLSPPPPPPHLAAPVPINAGRLRPSPNRAPPPSAPPDRGGGGAPAGFGGPPLHPVAFHPSPAALLPLLVPGEFGSGPSPRKEIVMGRPGTVWTNVEPRSVPVFPWHSLVPFLAPSQPDSAPQPQAGLQPASNLPGGQQGKEPPEPAAVVPDPGGPGQEPGRCGGATRPPSPPPAAPPAPPPAATAPPPAATAPPPAATAPPTSATAPPTEEEPPGGARPDSEAESDHDDAFLSSIVAPELPLPLPPGKRRTQSLSALPKDGDKEGRSPSKRDKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPREKQQYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEGGRGPGGGPKEPRERSASESGAGAPAGSSDVPSVPVPVPAPAPPPPPRPRAFSHSGVGGGAEPRAAIGELGQLCSAPPPFGGSKPGPGGGGAAPFGPAPFGPAPFGPRPRPPRAPSEENASDEERMVICEEEGDDDVIDDGFAPPPPDIDLKCKERVSDSDSDPGEGDKAPPRRLFPPRPPPELDPPPAPPPALHFALPPPQNGKAPPPPAGGGAGHAPKAQPSPPAQPPPPTPLLPGKVLVPVAPPGPALTPFGTPGAAPPPGKIIQLSPVPLVPPGSPGAPPPFPPRPPRPSPKPPQKVKAALATIPATPPPGPSSAPPPPDAHPPPLPSTNRCRGRGQEGEAAPPPPEKTFDSVDRVLSEVDFEERFAELPEFRPEEVLPSPTLQALATSPRTILGSYRKKRKNSTDLDPSVDDPSSPKRKLRRRSSCGSDPTTPKSAKCEGEIFTFNTGGEGDDVLGELEYDKVPFSSLRRTLDQRRALVMQLFQEHGFFPSAQATAAFQSRFSDIFPTKLCLQLKIREVRQKIMQAATPTDPAPPTEPDGPAPSAEATPPPPPPPSAPDPAPSAEATPPSPPAR
SIO_010081: CIC
subclass of: SO_0000673
so part of: CIC
location: join(261063..262281,262623..262860,270938..271087,272975..273242,275370..275490,276386..276568,278420..278573,280675..280811,282093..282197,282228..282321,283071..283163,284280..284335,284922..285018,285730..285863,285950..285998,288662..288744,289082..289230,291039..291190,293256..293384,294332..294463,296776..297026)
location: region:261063-297026:1
so has part: feature:261063-262281:1:exon
so has part: feature:262623-262860:1:exon
so has part: feature:270938-271087:1:exon
so has part: feature:272975-273242:1:exon
so has part: feature:275370-275490:1:exon
so has part: feature:276386-276568:1:exon
so has part: feature:278420-278573:1:exon
so has part: feature:280675-280811:1:exon
so has part: feature:282093-282197:1:exon
so has part: feature:282228-282321:1:exon
so has part: feature:283071-283163:1:exon
so has part: feature:284280-284335:1:exon
so has part: feature:284922-285018:1:exon
so has part: feature:285730-285863:1:exon
so has part: feature:285950-285998:1:exon
so has part: feature:288662-288744:1:exon
so has part: feature:289082-289230:1:exon
so has part: feature:291039-291190:1:exon
so has part: feature:293256-293384:1:exon
so has part: feature:294332-294463:1:exon
so has part: feature:296776-297026:1:exon

XP_032940317.1
type: Protein
SIO_000068: ncbiprotein

position:261063:1
position: 261063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297026:1
position: 297026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261063-262281:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:262623-262860:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270938-271087:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:272975-273242:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:275370-275490:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:276386-276568:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:278420-278573:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:280675-280811:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:282093-282197:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:282228-282321:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:283071-283163:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:284280-284335:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:284922-285018:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:285730-285863:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:285950-285998:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:288662-288744:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:289082-289230:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:291039-291190:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:293256-293384:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:294332-294463:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:296776-297026:1:exon

RPS19
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: RPS19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 298853..308156
location: region:298853-308156:1
so has part: feature:298853-308156:1:exon
subclass of: SO_0000010

117010157
type: Gene
SIO_000068: ncbigene

position:298853:1
position: 298853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308156:1
position: 308156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298853-308156:1:exon

RPS19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: RPS19
product: ribosomal protein S19
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084416.1
SIO_010081: RPS19
subclass of: SO_0000673
so part of: RPS19
location: join(298853..298939,299040..299110,299353..299453,306956..307139,307928..307982,308100..308156)
location: region:298853-308156:1
so has part: feature:298853-298939:1:exon
so has part: feature:299040-299110:1:exon
so has part: feature:299353-299453:1:exon
so has part: feature:306956-307139:1:exon
so has part: feature:307928-307982:1:exon
so has part: feature:308100-308156:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:298853-298939:1:exon

position:298939:1
position: 298939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:299040-299110:1:exon

position:299040:1
position: 299040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299110:1
position: 299110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:299353-299453:1:exon

position:299353:1
position: 299353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299453:1
position: 299453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:306956-307139:1:exon

position:306956:1
position: 306956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307139:1
position: 307139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:307928-307982:1:exon

position:307928:1
position: 307928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307982:1
position: 307982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:308100-308156:1:exon

position:308100:1
position: 308100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPS19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: RPS19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S19
translation: MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWADTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKVYGGRQRRGVRPSHFSRGSGAVARRVLQALEALKVVEKDQDGGRKLTPQGQRDLDRIAGQVAAASKKH
SIO_010081: RPS19
subclass of: SO_0000673
so part of: RPS19
location: join(299040..299110,299353..299453,306956..307139,307928..307982,308100..308126)
location: region:299040-308126:1
so has part: feature:299040-299110:1:exon
so has part: feature:299353-299453:1:exon
so has part: feature:306956-307139:1:exon
so has part: feature:307928-307982:1:exon
so has part: feature:308100-308126:1:exon

XP_032940307.1
type: Protein
SIO_000068: ncbiprotein

position:308126:1
position: 308126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299040-299110:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:299353-299453:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:306956-307139:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:307928-307982:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:308100-308126:1:exon

LOC117010158
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010158
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 300156..303999
location: region:300156-303999:1
so has part: feature:300156-303999:1:exon
subclass of: SO_0000011

117010158
type: Gene
SIO_000068: ncbigene

position:300156:1
position: 300156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303999:1
position: 303999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300156-303999:1:exon

LOC117010158
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117010158
product: uncharacterized LOC117010158
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004420578.1
SIO_010081: LOC117010158
subclass of: SO_0000673
so part of: LOC117010158
location: join(300156..300184,300743..300752,303611..303999)
location: region:300156-303999:1
so has part: feature:300156-300184:1:exon
so has part: feature:300743-300752:1:exon
so has part: feature:303611-303999:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:300156-300184:1:exon

position:300184:1
position: 300184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:300743-300752:1:exon

position:300743:1
position: 300743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300752:1
position: 300752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:303611-303999:1:exon

position:303611:1
position: 303611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CADM4
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: CADM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 312637..341455
location: region:312637-341455:1
so has part: feature:312637-341455:1:exon
subclass of: SO_0000010

117010212
type: Gene
SIO_000068: ncbigene

position:312637:1
position: 312637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341455:1
position: 341455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312637-341455:1:exon

CADM4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CADM4
product: cell adhesion molecule 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084509.1
SIO_010081: CADM4
subclass of: SO_0000673
so part of: CADM4
location: join(312637..312794,324949..325095,327242..327394,331687..331821,333126..333290,334350..334440,336017..336186,338619..338747,341280..341455)
location: region:312637-341455:1
so has part: feature:312637-312794:1:exon
so has part: feature:324949-325095:1:exon
so has part: feature:327242-327394:1:exon
so has part: feature:331687-331821:1:exon
so has part: feature:333126-333290:1:exon
so has part: feature:334350-334440:1:exon
so has part: feature:336017-336186:1:exon
so has part: feature:338619-338747:1:exon
so has part: feature:341280-341455:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:312637-312794:1:exon

position:312794:1
position: 312794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:324949-325095:1:exon

position:324949:1
position: 324949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325095:1
position: 325095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:327242-327394:1:exon

position:327242:1
position: 327242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327394:1
position: 327394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:331687-331821:1:exon

position:331687:1
position: 331687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331821:1
position: 331821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:333126-333290:1:exon

position:333126:1
position: 333126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333290:1
position: 333290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:334350-334440:1:exon

position:334350:1
position: 334350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334440:1
position: 334440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:336017-336186:1:exon

position:336017:1
position: 336017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336186:1
position: 336186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:338619-338747:1:exon

position:338619:1
position: 338619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338747:1
position: 338747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:341280-341455:1:exon

position:341280:1
position: 341280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CADM4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CADM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule 4
translation: MKLPLQPPPIPHPGLLPGLLLLWALGQGQAQEVQAENVTVLEGGTAEITCHLHRYDGSIVVIQNPARQTLFFNGTRALKDERFELAEFSRRRLRLRLARARLDDEGGYFCQLYADDTHHQIATLTVLVPPEEPQVEASALAVEGGELELTCLVPRARPLATLRWYRDRRELPGASSHLQHGKVFSQSSVLRLPVERRDHGAVVTCEASHPALGRGQRRLTQYQLDVQYPPSARIVPSQSVLREGDTLVLTCAASGNPRPTVTWSRGNESLPVRARAEGERLTLPALGPQDNGTYTCQVGNAHGRAADTYVLVVYDPGAVVAAQGAGPFAVVGGALALLVVLLLLLLGALLCCSVRQKGSYLTHEASELEEHGEAREAFLGGDGAKRKEEFFI
SIO_010081: CADM4
subclass of: SO_0000673
so part of: CADM4
location: join(312713..312794,324949..325095,327242..327394,331687..331821,333126..333290,334350..334440,336017..336186,338619..338747,341280..341386)
location: region:312713-341386:1
so has part: feature:312713-312794:1:exon
so has part: feature:324949-325095:1:exon
so has part: feature:327242-327394:1:exon
so has part: feature:331687-331821:1:exon
so has part: feature:333126-333290:1:exon
so has part: feature:334350-334440:1:exon
so has part: feature:336017-336186:1:exon
so has part: feature:338619-338747:1:exon
so has part: feature:341280-341386:1:exon

XP_032940400.1
type: Protein
SIO_000068: ncbiprotein

position:312713:1
position: 312713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341386:1
position: 341386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312713-312794:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:324949-325095:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327242-327394:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:331687-331821:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:333126-333290:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:334350-334440:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:336017-336186:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:338619-338747:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:341280-341386:1:exon

LOC117010213
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010213
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(340557..341218)
location: region:340557-341218:-1
so has part: feature:340557-341218:-1:exon
subclass of: SO_0000011

117010213
type: Gene
SIO_000068: ncbigene

position:340557:-1
position: 340557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341218:-1
position: 341218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340557-341218:-1:exon

LOC117010213
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117010213
product: uncharacterized LOC117010213
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004420588.1
SIO_010081: LOC117010213
subclass of: SO_0000673
so part of: LOC117010213
location: complement(join(340557..340585,340724..340803,340834..340878,341140..341218))
location: region:340557-341218:-1
so has part: feature:341140-341218:-1:exon
so has part: feature:340834-340878:-1:exon
so has part: feature:340724-340803:-1:exon
so has part: feature:340557-340585:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:341140-341218:-1:exon

position:341140:-1
position: 341140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:340834-340878:-1:exon

position:340834:-1
position: 340834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340878:-1
position: 340878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:340724-340803:-1:exon

position:340724:-1
position: 340724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340803:-1
position: 340803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:340557-340585:-1:exon

position:340585:-1
position: 340585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117010199
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010199
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(341562..342733)
location: region:341562-342733:-1
so has part: feature:341562-342733:-1:exon
subclass of: SO_0000011

117010199
type: Gene
SIO_000068: ncbigene

position:341562:-1
position: 341562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342733:-1
position: 342733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:341562-342733:-1:exon

LOC117010199
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117010199
product: uncharacterized LOC117010199
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004420583.1
SIO_010081: LOC117010199
subclass of: SO_0000673
so part of: LOC117010199
location: complement(join(341562..342036,342235..342347,342712..342733))
location: region:341562-342733:-1
so has part: feature:342712-342733:-1:exon
so has part: feature:342235-342347:-1:exon
so has part: feature:341562-342036:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:342712-342733:-1:exon

position:342712:-1
position: 342712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:342235-342347:-1:exon

position:342235:-1
position: 342235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342347:-1
position: 342347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:341562-342036:-1:exon

position:342036:-1
position: 342036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF576
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: ZNF576
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 344064..346592
location: region:344064-346592:1
so has part: feature:344064-346592:1:exon
subclass of: SO_0000010

117010169
type: Gene
SIO_000068: ncbigene

position:344064:1
position: 344064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346592:1
position: 346592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344064-346592:1:exon

ZNF576
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ZNF576
product: zinc finger protein 576
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084427.1
SIO_010081: ZNF576
subclass of: SO_0000673
so part of: ZNF576
location: join(344064..344089,344439..344539,345681..346592)
location: region:344064-346592:1
so has part: feature:344064-344089:1:exon
so has part: feature:344439-344539:1:exon
so has part: feature:345681-346592:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:344064-344089:1:exon

position:344089:1
position: 344089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:344439-344539:1:exon

position:344439:1
position: 344439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344539:1
position: 344539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:345681-346592:1:exon

position:345681:1
position: 345681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF576
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ZNF576
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 576
translation: MTSPRGAAHRPRRPQDEEEEEEGEGGGGALGSPPGPRLKGPVYRLGSRRCRRCLITFPDAAFAARHAKRQHPRDFAAAALRGALFVCFVCARPFGSSPALLRHQRGHALAPPTSGAKTRALPVIATPTSGPKPGQLPVIATPTSGAKTRALPVMATPTSGAKTRQLPVITPPTSGAQTRALPALAAPTSGGKTKALPVFTPPTSCAESRQLPVLTPSTSGAKAAPFPVLPTSTSGVQATPLQANITPTTGVKSKQLPVMSTPTSGVQATPIPAATPPLACTECGRAFAREGALHRHYIRHARGEL
SIO_010081: ZNF576
subclass of: SO_0000673
so part of: ZNF576
location: join(344064..344089,344439..344539,345681..346471)
location: region:344064-346471:1
so has part: feature:344064-344089:1:exon
so has part: feature:344439-344539:1:exon
so has part: feature:345681-346471:1:exon

XP_032940318.1
type: Protein
SIO_000068: ncbiprotein

position:346471:1
position: 346471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344064-344089:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:344439-344539:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:345681-346471:1:exon

ZNF526
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: ZNF526
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(346537..349143)
location: region:346537-349143:-1
so has part: feature:346537-349143:-1:exon
subclass of: SO_0000010

117010170
type: Gene
SIO_000068: ncbigene

position:346537:-1
position: 346537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349143:-1
position: 349143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346537-349143:-1:exon

ZNF526
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ZNF526
product: zinc finger protein 526
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084428.1
SIO_010081: ZNF526
subclass of: SO_0000673
so part of: ZNF526
location: complement(join(346537..346559,347603..348010,348663..348761,348846..349143))
location: region:346537-349143:-1
so has part: feature:348846-349143:-1:exon
so has part: feature:348663-348761:-1:exon
so has part: feature:347603-348010:-1:exon
so has part: feature:346537-346559:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:348846-349143:-1:exon

position:348846:-1
position: 348846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:348663-348761:-1:exon

position:348663:-1
position: 348663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348761:-1
position: 348761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:347603-348010:-1:exon

position:347603:-1
position: 347603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348010:-1
position: 348010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:346537-346559:-1:exon

position:346559:-1
position: 346559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF526
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ZNF526
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 526
translation: MGVVSVLWAWPGWCGRGPMQCRRGSTGSGRGLMDVGVAMPGMGVSLSEVGVAPRAAMMAAGRGPGQDGAFEEEEEEEEEEEEEEEEEEEEEEETAAAPGAPPPDDDSASEAASVTSSSGDSPSPPPSANGCAGPRSRPQGEDPRPFPEPGGGGDSEGGGGASHGAGGGGGGAAGGGGGAEDWHRCPECGRAFGTSRALKVHRSYHVGRKRPQAPPPMGVARPNPSPTPPPPSQCPSPPFKFHYICAECGLGFAAPAALGAHRCDRHGWPPPLSPR
SIO_010081: ZNF526
subclass of: SO_0000673
so part of: ZNF526
location: complement(join(346537..346559,347603..348010,348663..348761,348846..349143))
location: region:346537-349143:-1
so has part: feature:348846-349143:-1:exon
so has part: feature:348663-348761:-1:exon
so has part: feature:347603-348010:-1:exon
so has part: feature:346537-346559:-1:exon

XP_032940319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:348846-349143:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:348663-348761:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347603-348010:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:346537-346559:-1:exon

PLAUR
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: PLAUR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 359153..364644
location: region:359153-364644:1
so has part: feature:359153-364644:1:exon
subclass of: SO_0000010

117010171
type: Gene
SIO_000068: ncbigene

position:359153:1
position: 359153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364644:1
position: 364644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359153-364644:1:exon

PLAUR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PLAUR
product: plasminogen activator, urokinase receptor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084430.1
SIO_010081: PLAUR
subclass of: SO_0000673
so part of: PLAUR
location: join(359153..359201,359359..359466,359683..359865,360428..360544,361415..361534,362670..362792,363988..364133,364633..364644)
location: region:359153-364644:1
so has part: feature:359153-359201:1:exon
so has part: feature:359359-359466:1:exon
so has part: feature:359683-359865:1:exon
so has part: feature:360428-360544:1:exon
so has part: feature:361415-361534:1:exon
so has part: feature:362670-362792:1:exon
so has part: feature:363988-364133:1:exon
so has part: feature:364633-364644:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:359153-359201:1:exon

position:359201:1
position: 359201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:359359-359466:1:exon

position:359359:1
position: 359359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359466:1
position: 359466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:359683-359865:1:exon

position:359683:1
position: 359683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359865:1
position: 359865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:360428-360544:1:exon

position:360428:1
position: 360428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360544:1
position: 360544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:361415-361534:1:exon

position:361415:1
position: 361415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361534:1
position: 361534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:362670-362792:1:exon

position:362670:1
position: 362670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362792:1
position: 362792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:363988-364133:1:exon

position:363988:1
position: 363988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364133:1
position: 364133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:364633-364644:1:exon

position:364633:1
position: 364633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLAUR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PLAUR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: urokinase plasminogen activator surface receptor
translation: MGWGRGLVLLWGLLGTVPALLCPRCDVTGCRDPAPCPSPHAVCRRTTLTTLRGGRHFRRELTGCDVTGPPEVVLHFRSHGELVTLREERWGEGPGGSPAPSPAPPPAGDERGAALCPTCDSSDGSCLGPSPLLPCPHPGDRCIDVTARGPRGVGEGRLRGCGRAGPCRGLLGFDSGGRGVEMKCCESAQCGLETPPPSGLRCWGCDGPSPTGCAPRALPCGGGRTRCVLARSLGPSGEPWLIRGCATPEWCETPVGLGGLWGGSGGQEGSVGQSESMGQEESGRI
SIO_010081: PLAUR
subclass of: SO_0000673
so part of: PLAUR
location: join(359153..359201,359359..359466,359683..359865,360428..360544,361415..361534,362670..362792,363988..364133,364633..364644)
location: region:359153-364644:1
so has part: feature:359153-359201:1:exon
so has part: feature:359359-359466:1:exon
so has part: feature:359683-359865:1:exon
so has part: feature:360428-360544:1:exon
so has part: feature:361415-361534:1:exon
so has part: feature:362670-362792:1:exon
so has part: feature:363988-364133:1:exon
so has part: feature:364633-364644:1:exon

XP_032940321.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:359153-359201:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:359359-359466:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:359683-359865:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:360428-360544:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:361415-361534:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:362670-362792:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:363988-364133:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:364633-364644:1:exon

LOC117010172
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010172
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 364845..371848
location: region:364845-371848:1
so has part: feature:364845-371848:1:exon
subclass of: SO_0000010

117010172
type: Gene
SIO_000068: ncbigene

position:364845:1
position: 364845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371848:1
position: 371848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364845-371848:1:exon

LOC117010172
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010172
product: ly6/PLAUR domain-containing protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 62% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084431.1
SIO_010081: LOC117010172
subclass of: SO_0000673
so part of: LOC117010172
location: join(364845..365108,366810..366935,369347..369520,371024..371164,371242..371775,371838..371848)
location: region:364845-371848:1
so has part: feature:364845-365108:1:exon
so has part: feature:366810-366935:1:exon
so has part: feature:369347-369520:1:exon
so has part: feature:371024-371164:1:exon
so has part: feature:371242-371775:1:exon
so has part: feature:371838-371848:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:364845-365108:1:exon

position:365108:1
position: 365108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:366810-366935:1:exon

position:366810:1
position: 366810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366935:1
position: 366935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:369347-369520:1:exon

position:369347:1
position: 369347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369520:1
position: 369520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:371024-371164:1:exon

position:371024:1
position: 371024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371164:1
position: 371164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:371242-371775:1:exon

position:371242:1
position: 371242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371775:1
position: 371775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:371838-371848:1:exon

position:371838:1
position: 371838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117010172
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010172
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ly6/PLAUR domain-containing protein 3-like
translation: MGWSNPWDLAMGRGAPRAPHPVPTLVPPCPGSHKWGGSAPRPRGRAEMWGRAMGGARLLPLLLLLLLPGSLGLQCLSCGADDDGICGDVTNVTCPAESDVCSEALVAVTWSHGRFALGGRGCGRGQPGSLARALQLWGLVAFERRRNCEGGSCNGALPLGGRGALPEPAPNASARTPNGIRCYGCPEAGPCPPSAIVRCYDDQRACFHGNVTLRMGNLTFWREIRGCVADGACGRERRGDDAASLGGSCCRGDLCNQHPANQTFFEPDLPRLELLPHGHAPTATPGNATEGGGDKMADGGGGGSKMAGAESEGVSGNRRAGGGKMAAGGKMAAGDKMDAGDKMADGGKMAAGEKMADGDKMAAGEKMAEGDKMVSGDKMASGKKMAAGDKMASDGR
SIO_010081: LOC117010172
subclass of: SO_0000673
so part of: LOC117010172
location: join(364904..365108,366810..366935,369347..369520,371024..371164,371242..371775,371838..371848)
location: region:364904-371848:1
so has part: feature:364904-365108:1:exon
so has part: feature:366810-366935:1:exon
so has part: feature:369347-369520:1:exon
so has part: feature:371024-371164:1:exon
so has part: feature:371242-371775:1:exon
so has part: feature:371838-371848:1:exon

XP_032940322.1
type: Protein
SIO_000068: ncbiprotein

position:364904:1
position: 364904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364904-365108:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:366810-366935:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:369347-369520:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:371024-371164:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:371242-371775:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:371838-371848:1:exon

PHLDB3
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: PHLDB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(371761..383402)
location: region:371761-383402:-1
so has part: feature:371761-383402:-1:exon
subclass of: SO_0000010

117010156
type: Gene
SIO_000068: ncbigene

position:371761:-1
position: 371761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383402:-1
position: 383402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371761-383402:-1:exon

PHLDB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PHLDB3
product: pleckstrin homology like domain family B member 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033084415.2
SIO_010081: PHLDB3
subclass of: SO_0000673
so part of: PHLDB3
location: complement(join(371761..372022,377148..377233,379016..379193,381077..381090,381330..381509,382290..382368,383335..383402))
location: region:371761-383402:-1
so has part: feature:383335-383402:-1:exon
so has part: feature:382290-382368:-1:exon
so has part: feature:381330-381509:-1:exon
so has part: feature:381077-381090:-1:exon
so has part: feature:379016-379193:-1:exon
so has part: feature:377148-377233:-1:exon
so has part: feature:371761-372022:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:383335-383402:-1:exon

position:383335:-1
position: 383335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:382290-382368:-1:exon

position:382290:-1
position: 382290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382368:-1
position: 382368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:381330-381509:-1:exon

position:381330:-1
position: 381330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381509:-1
position: 381509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:381077-381090:-1:exon

position:381077:-1
position: 381077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381090:-1
position: 381090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:379016-379193:-1:exon

position:379016:-1
position: 379016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379193:-1
position: 379193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:377148-377233:-1:exon

position:377148:-1
position: 377148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:377233:-1
position: 377233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:371761-372022:-1:exon

position:372022:-1
position: 372022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PHLDB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PHLDB3
product: pleckstrin homology like domain family B member 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_033084413.2
SIO_010081: PHLDB3
subclass of: SO_0000673
so part of: PHLDB3
location: complement(join(371762..372022,377148..377233,379016..379193,381330..381509,382290..382368,383335..383402))
location: region:371762-383402:-1
so has part: feature:383335-383402:-1:exon
so has part: feature:382290-382368:-1:exon
so has part: feature:381330-381509:-1:exon
so has part: feature:379016-379193:-1:exon
so has part: feature:377148-377233:-1:exon
so has part: feature:371762-372022:-1:exon

position:371762:-1
position: 371762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383335-383402:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382290-382368:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:381330-381509:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:379016-379193:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:377148-377233:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:371762-372022:-1:exon

PHLDB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PHLDB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology-like domain family B member 3 isoform X3
translation: MLQLDPESYSTCLQLAQLQLRVREALAERERLLRAREARKAAKATPTETSITAKATPTETSITTNATPTEVPITTEAPPPLPQAPPTPDPAPPPPEPDLLLALRARGHRPESVGGLRILGGSLRGPLTKMGGKIKTWRRRWFHLDPTRRVLAYYGDQAQTKLKGVIYFQAIEEVWYDPGRVAGKRRRGSNRKGRSHPGPPRAWPRPTGPLTPSLRPIGRLCTT
SIO_010081: PHLDB3
subclass of: SO_0000673
so part of: PHLDB3
location: complement(join(371903..372022,377148..377233,379016..379193,381330..381509,382290..382368,383335..383363))
location: region:371903-383363:-1
so has part: feature:383335-383363:-1:exon
so has part: feature:382290-382368:-1:exon
so has part: feature:381330-381509:-1:exon
so has part: feature:379016-379193:-1:exon
so has part: feature:377148-377233:-1:exon
so has part: feature:371903-372022:-1:exon

XP_032940304.1
type: Protein
SIO_000068: ncbiprotein

position:371903:-1
position: 371903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383363:-1
position: 383363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383335-383363:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382290-382368:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:381330-381509:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:379016-379193:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:377148-377233:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:371903-372022:-1:exon

PHLDB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PHLDB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology-like domain family B member 3 isoform X5
translation: MLQLDPESYSTCLQLAQLQLRVREALAERERLLRAREARKAAKATPTETSITAKATPTETSITTNATPTEVPITTEAPPPLPQAPPTPDPAPPPPELSNFSPTSSLPCAPAGTAPRASGGCGSWGGPCGVPSPKWAEKSKPGGAAGSTWTPPGGSWPITGTKPRRSSRASFTSRPSRKFGTTPGAWPESAGGAATGRGGATRARPGLGPAPPAL
SIO_010081: PHLDB3
subclass of: SO_0000673
so part of: PHLDB3
location: complement(join(371944..372022,377148..377233,379016..379193,381077..381090,381330..381509,382290..382368,383335..383363))
location: region:371944-383363:-1
so has part: feature:383335-383363:-1:exon
so has part: feature:382290-382368:-1:exon
so has part: feature:381330-381509:-1:exon
so has part: feature:381077-381090:-1:exon
so has part: feature:379016-379193:-1:exon
so has part: feature:377148-377233:-1:exon
so has part: feature:371944-372022:-1:exon

XP_032940306.1
type: Protein
SIO_000068: ncbiprotein

position:371944:-1
position: 371944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383335-383363:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382290-382368:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:381330-381509:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:381077-381090:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:379016-379193:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:377148-377233:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:371944-372022:-1:exon

PHLDB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PHLDB3
product: pleckstrin homology like domain family B member 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033084414.1
SIO_010081: PHLDB3
subclass of: SO_0000673
so part of: PHLDB3
location: complement(join(375881..376110,377148..377233,379016..379193,381330..381422,381456..381509,382290..382368,383335..383402))
location: region:375881-383402:-1
so has part: feature:383335-383402:-1:exon
so has part: feature:382290-382368:-1:exon
so has part: feature:381456-381509:-1:exon
so has part: feature:381330-381422:-1:exon
so has part: feature:379016-379193:-1:exon
so has part: feature:377148-377233:-1:exon
so has part: feature:375881-376110:-1:exon

position:375881:-1
position: 375881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383335-383402:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382290-382368:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:381456-381509:-1:exon

position:381456:-1
position: 381456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:381330-381422:-1:exon

position:381422:-1
position: 381422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:379016-379193:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:377148-377233:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:375881-376110:-1:exon

position:376110:-1
position: 376110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PHLDB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PHLDB3
product: pleckstrin homology like domain family B member 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_033084411.1
SIO_010081: PHLDB3
subclass of: SO_0000673
so part of: PHLDB3
location: complement(join(375881..376110,377148..377233,379016..379193,381330..381509,382290..382368,383335..383402))
location: region:375881-383402:-1
so has part: feature:383335-383402:-1:exon
so has part: feature:382290-382368:-1:exon
so has part: feature:381330-381509:-1:exon
so has part: feature:379016-379193:-1:exon
so has part: feature:377148-377233:-1:exon
so has part: feature:375881-376110:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:383335-383402:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382290-382368:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:381330-381509:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:379016-379193:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:377148-377233:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:375881-376110:-1:exon

PHLDB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PHLDB3
product: pleckstrin homology like domain family B member 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033084412.1
SIO_010081: PHLDB3
subclass of: SO_0000673
so part of: PHLDB3
location: complement(join(375881..376110,377148..377233,379016..379193,381077..381090,381330..381509,382290..382368,383335..383402))
location: region:375881-383402:-1
so has part: feature:383335-383402:-1:exon
so has part: feature:382290-382368:-1:exon
so has part: feature:381330-381509:-1:exon
so has part: feature:381077-381090:-1:exon
so has part: feature:379016-379193:-1:exon
so has part: feature:377148-377233:-1:exon
so has part: feature:375881-376110:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:383335-383402:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382290-382368:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:381330-381509:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:381077-381090:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:379016-379193:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:377148-377233:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:375881-376110:-1:exon

PHLDB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PHLDB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology-like domain family B member 3 isoform X4
translation: MLQLDPESYSTCLQLAQLQLRVREALAERERLLRAREARKAAKATPTETSITAKATPTEVPITTEAPPPLPQAPPTPDPAPPPPEPDLLLALRARGHRPESVGGLRILGGSLRGPLTKMGGKIKTWRRRWFHLDPTRRVLAYYGDQAQTKLKGVIYFQAIEEVWYDPGRVAGKSPNPRLTFCLKTYERLFWLVAPSAEALRIWMDAVLTLTRAGGSF
SIO_010081: PHLDB3
subclass of: SO_0000673
so part of: PHLDB3
location: complement(join(375976..376110,377148..377233,379016..379193,381330..381422,381456..381509,382290..382368,383335..383363))
location: region:375976-383363:-1
so has part: feature:383335-383363:-1:exon
so has part: feature:382290-382368:-1:exon
so has part: feature:381456-381509:-1:exon
so has part: feature:381330-381422:-1:exon
so has part: feature:379016-379193:-1:exon
so has part: feature:377148-377233:-1:exon
so has part: feature:375976-376110:-1:exon

XP_032940305.1
type: Protein
SIO_000068: ncbiprotein

position:375976:-1
position: 375976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383335-383363:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382290-382368:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:381456-381509:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:381330-381422:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:379016-379193:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:377148-377233:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:375976-376110:-1:exon

PHLDB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PHLDB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology-like domain family B member 3 isoform X1
translation: MLQLDPESYSTCLQLAQLQLRVREALAERERLLRAREARKAAKATPTETSITAKATPTETSITTNATPTEVPITTEAPPPLPQAPPTPDPAPPPPEPDLLLALRARGHRPESVGGLRILGGSLRGPLTKMGGKIKTWRRRWFHLDPTRRVLAYYGDQAQTKLKGVIYFQAIEEVWYDPGRVAGKSPNPRLTFCLKTYERLFWLVAPSAEALRIWMDAVLTLTRAGGSF
SIO_010081: PHLDB3
subclass of: SO_0000673
so part of: PHLDB3
location: complement(join(375976..376110,377148..377233,379016..379193,381330..381509,382290..382368,383335..383363))
location: region:375976-383363:-1
so has part: feature:383335-383363:-1:exon
so has part: feature:382290-382368:-1:exon
so has part: feature:381330-381509:-1:exon
so has part: feature:379016-379193:-1:exon
so has part: feature:377148-377233:-1:exon
so has part: feature:375976-376110:-1:exon

XP_032940302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:383335-383363:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382290-382368:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:381330-381509:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:379016-379193:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:377148-377233:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:375976-376110:-1:exon

PHLDB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PHLDB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology-like domain family B member 3 isoform X2
translation: MLQLDPESYSTCLQLAQLQLRVREALAERERLLRAREARKAAKATPTETSITAKATPTETSITTNATPTEVPITTEAPPPLPQAPPTPDPAPPPPELSNFSPTSSLPCAPAGTAPRASGGCGSWGGPCGVPSPKWAEKSKPGGAAGSTWTPPGGSWPITGTKPRRSSRASFTSRPSRKFGTTPGAWPERAPTPASPSASRRTSACSGWWRRARRRCGSGWTRC
SIO_010081: PHLDB3
subclass of: SO_0000673
so part of: PHLDB3
location: complement(join(376005..376110,377148..377233,379016..379193,381077..381090,381330..381509,382290..382368,383335..383363))
location: region:376005-383363:-1
so has part: feature:383335-383363:-1:exon
so has part: feature:382290-382368:-1:exon
so has part: feature:381330-381509:-1:exon
so has part: feature:381077-381090:-1:exon
so has part: feature:379016-379193:-1:exon
so has part: feature:377148-377233:-1:exon
so has part: feature:376005-376110:-1:exon

XP_032940303.1
type: Protein
SIO_000068: ncbiprotein

position:376005:-1
position: 376005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383335-383363:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382290-382368:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:381330-381509:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:381077-381090:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:379016-379193:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:377148-377233:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:376005-376110:-1:exon

ETHE1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: ETHE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(392086..399865)
location: region:392086-399865:-1
so has part: feature:392086-399865:-1:exon
subclass of: SO_0000010

117010192
type: Gene
SIO_000068: ncbigene

position:392086:-1
position: 392086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399865:-1
position: 399865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392086-399865:-1:exon

ETHE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ETHE1
product: ETHE1 persulfide dioxygenase
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084473.2
SIO_010081: ETHE1
subclass of: SO_0000673
so part of: ETHE1
location: complement(join(392086..392270,393632..393748,395270..395359,395958..396087,397063..397208,398453..398597,399730..399865))
location: region:392086-399865:-1
so has part: feature:399730-399865:-1:exon
so has part: feature:398453-398597:-1:exon
so has part: feature:397063-397208:-1:exon
so has part: feature:395958-396087:-1:exon
so has part: feature:395270-395359:-1:exon
so has part: feature:393632-393748:-1:exon
so has part: feature:392086-392270:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:399730-399865:-1:exon

position:399730:-1
position: 399730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:398453-398597:-1:exon

position:398453:-1
position: 398453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398597:-1
position: 398597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:397063-397208:-1:exon

position:397063:-1
position: 397063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397208:-1
position: 397208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:395958-396087:-1:exon

position:395958:-1
position: 395958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396087:-1
position: 396087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:395270-395359:-1:exon

position:395270:-1
position: 395270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395359:-1
position: 395359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:393632-393748:-1:exon

position:393632:-1
position: 393632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393748:-1
position: 393748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:392086-392270:-1:exon

position:392270:-1
position: 392270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ETHE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ETHE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: persulfide dioxygenase ETHE1, mitochondrial
translation: MLLRRLPSAAVATARGLATAPGAGRQLLMRQLFEPQSCTYTYLLADGATGDAVIIDPVLDTVPRDLRLLRELGLTLRYAANTHCHADHVTGSGALRRALGCASAISRASGASADLRLGEGDELRFGSFALRVVPTPGHTPGCVTFVLDDSSMAFTGDALLVRGCGRTDFQQGCARTLHRSVHERIFTLPESCRIYPGHDYHGHTMSTVGEERRHNPRLRLSADDFVALMERLRLPRPRLMDVAVPANLRCGIQDEP
SIO_010081: ETHE1
subclass of: SO_0000673
so part of: ETHE1
location: complement(join(392221..392270,393632..393748,395270..395359,395958..396087,397063..397208,398453..398597,399730..399822))
location: region:392221-399822:-1
so has part: feature:399730-399822:-1:exon
so has part: feature:398453-398597:-1:exon
so has part: feature:397063-397208:-1:exon
so has part: feature:395958-396087:-1:exon
so has part: feature:395270-395359:-1:exon
so has part: feature:393632-393748:-1:exon
so has part: feature:392221-392270:-1:exon

XP_032940364.1
type: Protein
SIO_000068: ncbiprotein

position:392221:-1
position: 392221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399822:-1
position: 399822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399730-399822:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:398453-398597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:397063-397208:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:395958-396087:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:395270-395359:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:393632-393748:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:392221-392270:-1:exon

XRCC1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: XRCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(401425..411061)
location: region:401425-411061:-1
so has part: feature:401425-411061:-1:exon
subclass of: SO_0000010

117010204
type: Gene
SIO_000068: ncbigene

position:401425:-1
position: 401425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411061:-1
position: 411061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401425-411061:-1:exon

XRCC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: XRCC1
product: X-ray repair cross complementing 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033084494.2
SIO_010081: XRCC1
subclass of: SO_0000673
so part of: XRCC1
location: complement(join(401425..401642,401730..401805,402600..402690,402774..402853,403353..403544,404042..404158,406356..406672,407427..407503,408002..408101,408848..408913,409176..409351,410307..410405,410489..410581,410683..411061))
location: region:401425-411061:-1
so has part: feature:410683-411061:-1:exon
so has part: feature:410489-410581:-1:exon
so has part: feature:410307-410405:-1:exon
so has part: feature:409176-409351:-1:exon
so has part: feature:408848-408913:-1:exon
so has part: feature:408002-408101:-1:exon
so has part: feature:407427-407503:-1:exon
so has part: feature:406356-406672:-1:exon
so has part: feature:404042-404158:-1:exon
so has part: feature:403353-403544:-1:exon
so has part: feature:402774-402853:-1:exon
so has part: feature:402600-402690:-1:exon
so has part: feature:401730-401805:-1:exon
so has part: feature:401425-401642:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:410683-411061:-1:exon

position:410683:-1
position: 410683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:410489-410581:-1:exon

position:410489:-1
position: 410489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:410581:-1
position: 410581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:410307-410405:-1:exon

position:410307:-1
position: 410307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:410405:-1
position: 410405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:409176-409351:-1:exon

position:409176:-1
position: 409176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409351:-1
position: 409351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:408848-408913:-1:exon

position:408848:-1
position: 408848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408913:-1
position: 408913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:408002-408101:-1:exon

position:408002:-1
position: 408002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408101:-1
position: 408101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:407427-407503:-1:exon

position:407427:-1
position: 407427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407503:-1
position: 407503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:406356-406672:-1:exon

position:406356:-1
position: 406356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406672:-1
position: 406672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:404042-404158:-1:exon

position:404042:-1
position: 404042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404158:-1
position: 404158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:403353-403544:-1:exon

position:403353:-1
position: 403353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:403544:-1
position: 403544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:402774-402853:-1:exon

position:402774:-1
position: 402774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402853:-1
position: 402853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:402600-402690:-1:exon

position:402600:-1
position: 402600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402690:-1
position: 402690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:401730-401805:-1:exon

position:401730:-1
position: 401730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:401805:-1
position: 401805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:401425-401642:-1:exon

position:401642:-1
position: 401642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

XRCC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: XRCC1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: DNA repair protein XRCC1
translation: MPEIPLTRVVSVSSADPRHPAENLLRPDDGGRWRGAAAGEKQLSVVLELGDSRPIHSLHIGNDGAAFVEVLGGSSAGGEFQVLLPSAALMSPSESRAGAEPRRVRLFGPESLVRGPSSPGAHLHTWDRLKVVLSQPYCQSRPYGLSFIRVFAAPAEDEAPPRRRLGPFTLREEGEGSPRRPPGALFYQRPSPTAAPPRDPSPGPSYAAAALRGTGSDHGQPPPKKPKPHLDTPKTTPGTPKSHLETTKTSPGTTKTSPGTPKATPGTPKSHLGGSKAHLGGPKPLEGVVLALSGFQNPLRGHLRAAAAALGAQYRPDWGEDCTHLVCAFARTPKASRARQRGGVVVTPEWIWECQRTGKRVTCERYLLRGSASSSSEGEGPDEAPPPPRPSPAKVKKGAEPKEPDTPETPPPTAPATPPESPESDGQSDTDPYGGSTEENSEDEEGEGEPIPQLPDFFQDKTFFFHGEFPAGVERRLLRYVVAFGGTLAPYMDDSVTHVVTAQDWDPAFEEALELRPSLTFVRPHWLLQCGERQRPLPAPPFPRA
SIO_010081: XRCC1
subclass of: SO_0000673
so part of: XRCC1
location: complement(join(401538..401642,401730..401805,402600..402690,402774..402853,403353..403544,404042..404158,406356..406672,407427..407503,408002..408101,408848..408913,409176..409351,410307..410405,410489..410581,410683..410733))
location: region:401538-410733:-1
so has part: feature:410683-410733:-1:exon
so has part: feature:410489-410581:-1:exon
so has part: feature:410307-410405:-1:exon
so has part: feature:409176-409351:-1:exon
so has part: feature:408848-408913:-1:exon
so has part: feature:408002-408101:-1:exon
so has part: feature:407427-407503:-1:exon
so has part: feature:406356-406672:-1:exon
so has part: feature:404042-404158:-1:exon
so has part: feature:403353-403544:-1:exon
so has part: feature:402774-402853:-1:exon
so has part: feature:402600-402690:-1:exon
so has part: feature:401730-401805:-1:exon
so has part: feature:401538-401642:-1:exon

XP_032940385.1
type: Protein
SIO_000068: ncbiprotein

position:401538:-1
position: 401538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:410733:-1
position: 410733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:410683-410733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:410489-410581:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:410307-410405:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:409176-409351:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:408848-408913:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:408002-408101:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:407427-407503:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:406356-406672:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:404042-404158:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:403353-403544:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:402774-402853:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:402600-402690:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:401730-401805:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:401538-401642:-1:exon

LOC117010207
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010207
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 403630..405209
location: region:403630-405209:1
so has part: feature:403630-405209:1:exon
subclass of: SO_0000011

117010207
type: Gene
SIO_000068: ncbigene

position:403630:1
position: 403630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405209:1
position: 405209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403630-405209:1:exon

LOC117010207
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117010207
product: uncharacterized LOC117010207
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004420587.1
SIO_010081: LOC117010207
subclass of: SO_0000673
so part of: LOC117010207
location: join(403630..403644,404688..404701,404897..405119,405181..405209)
location: region:403630-405209:1
so has part: feature:403630-403644:1:exon
so has part: feature:404688-404701:1:exon
so has part: feature:404897-405119:1:exon
so has part: feature:405181-405209:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:403630-403644:1:exon

position:403644:1
position: 403644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:404688-404701:1:exon

position:404688:1
position: 404688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404701:1
position: 404701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:404897-405119:1:exon

position:404897:1
position: 404897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405119:1
position: 405119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:405181-405209:1:exon

position:405181:1
position: 405181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117010206
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010206
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 405246..406059
location: region:405246-406059:1
so has part: feature:405246-406059:1:exon
subclass of: SO_0000011

117010206
type: Gene
SIO_000068: ncbigene

position:405246:1
position: 405246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406059:1
position: 406059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405246-406059:1:exon

LOC117010206
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117010206
product: uncharacterized LOC117010206, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004420585.2
SIO_010081: LOC117010206
subclass of: SO_0000673
so part of: LOC117010206
location: join(405246..405261,405673..405929,406001..406059)
location: region:405246-406059:1
so has part: feature:405246-405261:1:exon
so has part: feature:405673-405929:1:exon
so has part: feature:406001-406059:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:405246-405261:1:exon

position:405261:1
position: 405261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:405673-405929:1:exon

position:405673:1
position: 405673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405929:1
position: 405929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:406001-406059:1:exon

position:406001:1
position: 406001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117010206
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117010206
product: uncharacterized LOC117010206, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004420586.2
SIO_010081: LOC117010206
subclass of: SO_0000673
so part of: LOC117010206
location: join(405523..405549,405683..405929,406001..406059)
location: region:405523-406059:1
so has part: feature:405523-405549:1:exon
so has part: feature:405683-405929:1:exon
so has part: feature:406001-406059:1:exon

position:405523:1
position: 405523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405523-405549:1:exon

position:405549:1
position: 405549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:405683-405929:1:exon

position:405683:1
position: 405683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:406001-406059:1:exon

SMG9
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: SMG9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(411126..434641)
location: region:411126-434641:-1
so has part: feature:411126-434641:-1:exon
subclass of: SO_0000010

117010205
type: Gene
SIO_000068: ncbigene

position:411126:-1
position: 411126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434641:-1
position: 434641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411126-434641:-1:exon

SMG9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SMG9
product: SMG9 nonsense mediated mRNA decay factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_033084497.1
SIO_010081: SMG9
subclass of: SO_0000673
so part of: SMG9
location: complement(join(411126..411256,412879..413020,415203..415328,417490..417597,421630..421733,422716..422801,425376..425471,430852..430963,432139..432251,432332..432429,433289..433532,433622..433693,434377..434641))
location: region:411126-434641:-1
so has part: feature:434377-434641:-1:exon
so has part: feature:433622-433693:-1:exon
so has part: feature:433289-433532:-1:exon
so has part: feature:432332-432429:-1:exon
so has part: feature:432139-432251:-1:exon
so has part: feature:430852-430963:-1:exon
so has part: feature:425376-425471:-1:exon
so has part: feature:422716-422801:-1:exon
so has part: feature:421630-421733:-1:exon
so has part: feature:417490-417597:-1:exon
so has part: feature:415203-415328:-1:exon
so has part: feature:412879-413020:-1:exon
so has part: feature:411126-411256:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:434377-434641:-1:exon

position:434377:-1
position: 434377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:433622-433693:-1:exon

position:433622:-1
position: 433622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433693:-1
position: 433693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:433289-433532:-1:exon

position:433289:-1
position: 433289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433532:-1
position: 433532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:432332-432429:-1:exon

position:432332:-1
position: 432332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432429:-1
position: 432429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:432139-432251:-1:exon

position:432139:-1
position: 432139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432251:-1
position: 432251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:430852-430963:-1:exon

position:430852:-1
position: 430852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430963:-1
position: 430963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:425376-425471:-1:exon

position:425376:-1
position: 425376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425471:-1
position: 425471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:422716-422801:-1:exon

position:422716:-1
position: 422716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:422801:-1
position: 422801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:421630-421733:-1:exon

position:421630:-1
position: 421630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421733:-1
position: 421733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:417490-417597:-1:exon

position:417490:-1
position: 417490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417597:-1
position: 417597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:415203-415328:-1:exon

position:415203:-1
position: 415203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415328:-1
position: 415328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:412879-413020:-1:exon

position:412879:-1
position: 412879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413020:-1
position: 413020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:411126-411256:-1:exon

position:411256:-1
position: 411256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMG9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SMG9
product: SMG9 nonsense mediated mRNA decay factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_033084495.1
SIO_010081: SMG9
subclass of: SO_0000673
so part of: SMG9
location: complement(join(411126..411256,412879..413020,415203..415328,417490..417597,421630..421733,422716..422801,425376..425471,430852..430963,432139..432251,432332..432429,433289..433535,433622..433693,434377..434641))
location: region:411126-434641:-1
so has part: feature:434377-434641:-1:exon
so has part: feature:433622-433693:-1:exon
so has part: feature:433289-433535:-1:exon
so has part: feature:432332-432429:-1:exon
so has part: feature:432139-432251:-1:exon
so has part: feature:430852-430963:-1:exon
so has part: feature:425376-425471:-1:exon
so has part: feature:422716-422801:-1:exon
so has part: feature:421630-421733:-1:exon
so has part: feature:417490-417597:-1:exon
so has part: feature:415203-415328:-1:exon
so has part: feature:412879-413020:-1:exon
so has part: feature:411126-411256:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:434377-434641:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:433622-433693:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:433289-433535:-1:exon

position:433535:-1
position: 433535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:432332-432429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:432139-432251:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:430852-430963:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:425376-425471:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:422716-422801:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:421630-421733:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:417490-417597:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:415203-415328:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:412879-413020:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:411126-411256:-1:exon

SMG9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SMG9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SMG9 isoform X2
translation: MSDSGQSPAPGARRRCWNREKEPEGGGAERREVGEEPTGPLQKTPIILAKPPAERQPPPAAPKAGPTQAPPPPAPAPPIVLMKARGEEGRGAGGGASAAAGEGPTQAPPLEREGPRPTQPVYQLHSRGLAPPAALDPAQAQARLAAPEKMKTSIKLVDEQMNWCDSALEFLLEQTDVLVVGALGLQGTGKSTVLSLLAGNQPEEDPRSFVFRPQPPELRERGGAQTGGIDLFVTQERVLFLDSQPILSPAHLDHLINNDRKLPPEFALPHAYVETQSLQIAAFLFTVCHVVLLVQDWFTDLGLYRFLQTAEMVKPPTPSPSHDGAASGAEEPSEYYPHLVFVQTRAPPESFSPRRLGQMQRVLGRLMAHSRLKYRGSLSMRDPSPTPGPAPPPPEAEVNLFLLPPLESEPEDTLPRAGGGGALFPALPPFRGRGGLGGLLARLRGRVLGAARSQLSHSLLTERNWFHYAARIWDGVKKSSALAEYGRLLG
SIO_010081: SMG9
subclass of: SO_0000673
so part of: SMG9
location: complement(join(411178..411256,412879..413020,415203..415328,417490..417597,421630..421733,422716..422801,425376..425471,430852..430963,432139..432251,432332..432429,433289..433532,433622..433693,434377..434469))
location: region:411178-434469:-1
so has part: feature:434377-434469:-1:exon
so has part: feature:433622-433693:-1:exon
so has part: feature:433289-433532:-1:exon
so has part: feature:432332-432429:-1:exon
so has part: feature:432139-432251:-1:exon
so has part: feature:430852-430963:-1:exon
so has part: feature:425376-425471:-1:exon
so has part: feature:422716-422801:-1:exon
so has part: feature:421630-421733:-1:exon
so has part: feature:417490-417597:-1:exon
so has part: feature:415203-415328:-1:exon
so has part: feature:412879-413020:-1:exon
so has part: feature:411178-411256:-1:exon

XP_032940388.1
type: Protein
SIO_000068: ncbiprotein

position:411178:-1
position: 411178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434469:-1
position: 434469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434377-434469:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:433622-433693:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:433289-433532:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:432332-432429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:432139-432251:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:430852-430963:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:425376-425471:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:422716-422801:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:421630-421733:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:417490-417597:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:415203-415328:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:412879-413020:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:411178-411256:-1:exon

SMG9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SMG9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SMG9 isoform X1
translation: MSDSGQSPAPGARRRCWNREKEPEGGGAERREVGEEPTGPLQKTPIILAKPPAERQQPPPAAPKAGPTQAPPPPAPAPPIVLMKARGEEGRGAGGGASAAAGEGPTQAPPLEREGPRPTQPVYQLHSRGLAPPAALDPAQAQARLAAPEKMKTSIKLVDEQMNWCDSALEFLLEQTDVLVVGALGLQGTGKSTVLSLLAGNQPEEDPRSFVFRPQPPELRERGGAQTGGIDLFVTQERVLFLDSQPILSPAHLDHLINNDRKLPPEFALPHAYVETQSLQIAAFLFTVCHVVLLVQDWFTDLGLYRFLQTAEMVKPPTPSPSHDGAASGAEEPSEYYPHLVFVQTRAPPESFSPRRLGQMQRVLGRLMAHSRLKYRGSLSMRDPSPTPGPAPPPPEAEVNLFLLPPLESEPEDTLPRAGGGGALFPALPPFRGRGGLGGLLARLRGRVLGAARSQLSHSLLTERNWFHYAARIWDGVKKSSALAEYGRLLG
SIO_010081: SMG9
subclass of: SO_0000673
so part of: SMG9
location: complement(join(411178..411256,412879..413020,415203..415328,417490..417597,421630..421733,422716..422801,425376..425471,430852..430963,432139..432251,432332..432429,433289..433535,433622..433693,434377..434469))
location: region:411178-434469:-1
so has part: feature:434377-434469:-1:exon
so has part: feature:433622-433693:-1:exon
so has part: feature:433289-433535:-1:exon
so has part: feature:432332-432429:-1:exon
so has part: feature:432139-432251:-1:exon
so has part: feature:430852-430963:-1:exon
so has part: feature:425376-425471:-1:exon
so has part: feature:422716-422801:-1:exon
so has part: feature:421630-421733:-1:exon
so has part: feature:417490-417597:-1:exon
so has part: feature:415203-415328:-1:exon
so has part: feature:412879-413020:-1:exon
so has part: feature:411178-411256:-1:exon

XP_032940386.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:434377-434469:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:433622-433693:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:433289-433535:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:432332-432429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:432139-432251:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:430852-430963:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:425376-425471:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:422716-422801:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:421630-421733:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:417490-417597:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:415203-415328:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:412879-413020:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:411178-411256:-1:exon

PPP2R1A
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: PPP2R1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(435137..459152)
location: region:435137-459152:-1
so has part: feature:435137-459152:-1:exon
subclass of: SO_0000010

117010184
type: Gene
SIO_000068: ncbigene

position:435137:-1
position: 435137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459152:-1
position: 459152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435137-459152:-1:exon

PPP2R1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PPP2R1A
product: protein phosphatase 2 scaffold subunit Aalpha, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 152 ESTs, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033084443.1
SIO_010081: PPP2R1A
subclass of: SO_0000673
so part of: PPP2R1A
location: complement(join(435137..435220,436115..436206,439112..439254,442580..442734,443919..443979,445474..445647,447146..447280,448489..448559,448650..448764,449625..449780,453112..453259,455932..456164,457908..458008,458246..458336,458992..459152))
location: region:435137-459152:-1
so has part: feature:458992-459152:-1:exon
so has part: feature:458246-458336:-1:exon
so has part: feature:457908-458008:-1:exon
so has part: feature:455932-456164:-1:exon
so has part: feature:453112-453259:-1:exon
so has part: feature:449625-449780:-1:exon
so has part: feature:448650-448764:-1:exon
so has part: feature:448489-448559:-1:exon
so has part: feature:447146-447280:-1:exon
so has part: feature:445474-445647:-1:exon
so has part: feature:443919-443979:-1:exon
so has part: feature:442580-442734:-1:exon
so has part: feature:439112-439254:-1:exon
so has part: feature:436115-436206:-1:exon
so has part: feature:435137-435220:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:458992-459152:-1:exon

position:458992:-1
position: 458992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:458246-458336:-1:exon

position:458246:-1
position: 458246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458336:-1
position: 458336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:457908-458008:-1:exon

position:457908:-1
position: 457908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458008:-1
position: 458008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:455932-456164:-1:exon

position:455932:-1
position: 455932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456164:-1
position: 456164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:453112-453259:-1:exon

position:453112:-1
position: 453112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453259:-1
position: 453259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:449625-449780:-1:exon

position:449625:-1
position: 449625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449780:-1
position: 449780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:448650-448764:-1:exon

position:448650:-1
position: 448650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448764:-1
position: 448764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:448489-448559:-1:exon

position:448489:-1
position: 448489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448559:-1
position: 448559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:447146-447280:-1:exon

position:447146:-1
position: 447146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:447280:-1
position: 447280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:445474-445647:-1:exon

position:445474:-1
position: 445474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445647:-1
position: 445647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:443919-443979:-1:exon

position:443919:-1
position: 443919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443979:-1
position: 443979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:442580-442734:-1:exon

position:442580:-1
position: 442580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:442734:-1
position: 442734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:439112-439254:-1:exon

position:439112:-1
position: 439112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439254:-1
position: 439254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:436115-436206:-1:exon

position:436115:-1
position: 436115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436206:-1
position: 436206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:435137-435220:-1:exon

position:435220:-1
position: 435220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPP2R1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PPP2R1A
product: protein phosphatase 2 scaffold subunit Aalpha, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 149 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_042780132.1
SIO_010081: PPP2R1A
subclass of: SO_0000673
so part of: PPP2R1A
location: complement(join(435137..435220,436115..436206,439112..439212,439659..439700,442580..442734,443919..443979,445474..445647,447146..447280,448489..448559,448650..448764,449625..449780,453112..453259,455932..456164,457908..458008,458246..458336,458992..459152))
location: region:435137-459152:-1
so has part: feature:458992-459152:-1:exon
so has part: feature:458246-458336:-1:exon
so has part: feature:457908-458008:-1:exon
so has part: feature:455932-456164:-1:exon
so has part: feature:453112-453259:-1:exon
so has part: feature:449625-449780:-1:exon
so has part: feature:448650-448764:-1:exon
so has part: feature:448489-448559:-1:exon
so has part: feature:447146-447280:-1:exon
so has part: feature:445474-445647:-1:exon
so has part: feature:443919-443979:-1:exon
so has part: feature:442580-442734:-1:exon
so has part: feature:439659-439700:-1:exon
so has part: feature:439112-439212:-1:exon
so has part: feature:436115-436206:-1:exon
so has part: feature:435137-435220:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:458992-459152:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458246-458336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457908-458008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:455932-456164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453112-453259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449625-449780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448650-448764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448489-448559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447146-447280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445474-445647:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443919-443979:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:442580-442734:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:439659-439700:-1:exon

position:439659:-1
position: 439659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439700:-1
position: 439700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:439112-439212:-1:exon

position:439212:-1
position: 439212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:436115-436206:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:435137-435220:-1:exon

PPP2R1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PPP2R1A
product: protein phosphatase 2 scaffold subunit Aalpha, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 149 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033084445.1
SIO_010081: PPP2R1A
subclass of: SO_0000673
so part of: PPP2R1A
location: complement(join(435137..435220,436115..436206,439112..439212,440981..441022,442580..442734,443919..443979,445474..445647,447146..447280,448489..448559,448650..448764,449625..449780,453112..453259,455932..456164,457908..458008,458246..458336,458992..459152))
location: region:435137-459152:-1
so has part: feature:458992-459152:-1:exon
so has part: feature:458246-458336:-1:exon
so has part: feature:457908-458008:-1:exon
so has part: feature:455932-456164:-1:exon
so has part: feature:453112-453259:-1:exon
so has part: feature:449625-449780:-1:exon
so has part: feature:448650-448764:-1:exon
so has part: feature:448489-448559:-1:exon
so has part: feature:447146-447280:-1:exon
so has part: feature:445474-445647:-1:exon
so has part: feature:443919-443979:-1:exon
so has part: feature:442580-442734:-1:exon
so has part: feature:440981-441022:-1:exon
so has part: feature:439112-439212:-1:exon
so has part: feature:436115-436206:-1:exon
so has part: feature:435137-435220:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:458992-459152:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458246-458336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457908-458008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:455932-456164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453112-453259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449625-449780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448650-448764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448489-448559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447146-447280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445474-445647:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443919-443979:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:442580-442734:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:440981-441022:-1:exon

position:440981:-1
position: 440981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441022:-1
position: 441022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:439112-439212:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:436115-436206:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:435137-435220:-1:exon

PPP2R1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PPP2R1A
product: protein phosphatase 2 scaffold subunit Aalpha, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 149 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033084444.1
SIO_010081: PPP2R1A
subclass of: SO_0000673
so part of: PPP2R1A
location: complement(join(435137..435220,436115..436206,439112..439212,441729..441770,442580..442734,443919..443979,445474..445647,447146..447280,448489..448559,448650..448764,449625..449780,453112..453259,455932..456164,457908..458008,458246..458336,458992..459152))
location: region:435137-459152:-1
so has part: feature:458992-459152:-1:exon
so has part: feature:458246-458336:-1:exon
so has part: feature:457908-458008:-1:exon
so has part: feature:455932-456164:-1:exon
so has part: feature:453112-453259:-1:exon
so has part: feature:449625-449780:-1:exon
so has part: feature:448650-448764:-1:exon
so has part: feature:448489-448559:-1:exon
so has part: feature:447146-447280:-1:exon
so has part: feature:445474-445647:-1:exon
so has part: feature:443919-443979:-1:exon
so has part: feature:442580-442734:-1:exon
so has part: feature:441729-441770:-1:exon
so has part: feature:439112-439212:-1:exon
so has part: feature:436115-436206:-1:exon
so has part: feature:435137-435220:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:458992-459152:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458246-458336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457908-458008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:455932-456164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453112-453259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449625-449780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448650-448764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448489-448559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447146-447280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445474-445647:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443919-443979:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:442580-442734:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:441729-441770:-1:exon

position:441729:-1
position: 441729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441770:-1
position: 441770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:439112-439212:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:436115-436206:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:435137-435220:-1:exon

PPP2R1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PPP2R1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform isoform X1
translation: MAAADGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTALVGGPEFVHCLLPPLESLATVEETVVRDKAVESLRAVSHEHSPPDLEGHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSPVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELEHVKSEIIPMFSNLASDEQDSVRLLAVEACVSIAQLLPQEELEGLVMPTLRQAAEDKSWRVRYMVADKFTELQRAVGPEITKTDLVGAFQSLMKDCEAEVRAAASHKVKEFCENLSPDCREAVIMGQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTVEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLRKLVERFGHTWAQGTIVPKVLAMAADPNYLHRMTTLFCINVLSEVCGQEVTTQQMLPTVLRMAADAVANVRFNVAKSLQRIGPILDSGTLQTEVKPVLEKLTQDQDVDVKYFAQEALTVLALA
SIO_010081: PPP2R1A
subclass of: SO_0000673
so part of: PPP2R1A
location: complement(join(435204..435220,436115..436206,439112..439254,442580..442734,443919..443979,445474..445647,447146..447280,448489..448559,448650..448764,449625..449780,453112..453259,455932..456164,457908..458008,458246..458336,458992..459069))
location: region:435204-459069:-1
so has part: feature:458992-459069:-1:exon
so has part: feature:458246-458336:-1:exon
so has part: feature:457908-458008:-1:exon
so has part: feature:455932-456164:-1:exon
so has part: feature:453112-453259:-1:exon
so has part: feature:449625-449780:-1:exon
so has part: feature:448650-448764:-1:exon
so has part: feature:448489-448559:-1:exon
so has part: feature:447146-447280:-1:exon
so has part: feature:445474-445647:-1:exon
so has part: feature:443919-443979:-1:exon
so has part: feature:442580-442734:-1:exon
so has part: feature:439112-439254:-1:exon
so has part: feature:436115-436206:-1:exon
so has part: feature:435204-435220:-1:exon

XP_032940334.1
type: Protein
SIO_000068: ncbiprotein

position:435204:-1
position: 435204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459069:-1
position: 459069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458992-459069:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458246-458336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457908-458008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:455932-456164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453112-453259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449625-449780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448650-448764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448489-448559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447146-447280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445474-445647:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443919-443979:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:442580-442734:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:439112-439254:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:436115-436206:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:435204-435220:-1:exon

PPP2R1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PPP2R1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform isoform X4
translation: MAAADGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTALVGGPEFVHCLLPPLESLATVEETVVRDKAVESLRAVSHEHSPPDLEGHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSPVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELEHVKSEIIPMFSNLASDEQDSVRLLAVEACVSIAQLLPQEELEGLVMPTLRQAAEDKSWRVRYMVADKFTELQRAVGPEITKTDLVGAFQSLMKDCEAEVRAAASHKVKEFCENLSPDCREAVIMGQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTVEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLRKLVERFGHTWAQGTIVPKVLAMAADPNYLHRMTTLFCINVLSEVCGQEVTTQQMLPTVLRMAADAVANVRFNVAKSLQRIGPILDSGTLQTEVKPVLEKLTQDQDVDVKYFAQEALTVLALA
SIO_010081: PPP2R1A
subclass of: SO_0000673
so part of: PPP2R1A
location: complement(join(435204..435220,436115..436206,439112..439212,439659..439700,442580..442734,443919..443979,445474..445647,447146..447280,448489..448559,448650..448764,449625..449780,453112..453259,455932..456164,457908..458008,458246..458336,458992..459069))
location: region:435204-459069:-1
so has part: feature:458992-459069:-1:exon
so has part: feature:458246-458336:-1:exon
so has part: feature:457908-458008:-1:exon
so has part: feature:455932-456164:-1:exon
so has part: feature:453112-453259:-1:exon
so has part: feature:449625-449780:-1:exon
so has part: feature:448650-448764:-1:exon
so has part: feature:448489-448559:-1:exon
so has part: feature:447146-447280:-1:exon
so has part: feature:445474-445647:-1:exon
so has part: feature:443919-443979:-1:exon
so has part: feature:442580-442734:-1:exon
so has part: feature:439659-439700:-1:exon
so has part: feature:439112-439212:-1:exon
so has part: feature:436115-436206:-1:exon
so has part: feature:435204-435220:-1:exon

XP_042636066.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:458992-459069:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458246-458336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457908-458008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:455932-456164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453112-453259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449625-449780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448650-448764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448489-448559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447146-447280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445474-445647:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443919-443979:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:442580-442734:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:439659-439700:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:439112-439212:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:436115-436206:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:435204-435220:-1:exon

PPP2R1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PPP2R1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform isoform X3
translation: MAAADGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTALVGGPEFVHCLLPPLESLATVEETVVRDKAVESLRAVSHEHSPPDLEGHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSPVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELEHVKSEIIPMFSNLASDEQDSVRLLAVEACVSIAQLLPQEELEGLVMPTLRQAAEDKSWRVRYMVADKFTELQRAVGPEITKTDLVGAFQSLMKDCEAEVRAAASHKVKEFCENLSPDCREAVIMGQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTVEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLRKLVERFGHTWAQGTIVPKVLAMAADPNYLHRMTTLFCINVLSEVCGQEVTTQQMLPTVLRMAADAVANVRFNVAKSLQRIGPILDSGTLQTEVKPVLEKLTQDQDVDVKYFAQEALTVLALA
SIO_010081: PPP2R1A
subclass of: SO_0000673
so part of: PPP2R1A
location: complement(join(435204..435220,436115..436206,439112..439212,440981..441022,442580..442734,443919..443979,445474..445647,447146..447280,448489..448559,448650..448764,449625..449780,453112..453259,455932..456164,457908..458008,458246..458336,458992..459069))
location: region:435204-459069:-1
so has part: feature:458992-459069:-1:exon
so has part: feature:458246-458336:-1:exon
so has part: feature:457908-458008:-1:exon
so has part: feature:455932-456164:-1:exon
so has part: feature:453112-453259:-1:exon
so has part: feature:449625-449780:-1:exon
so has part: feature:448650-448764:-1:exon
so has part: feature:448489-448559:-1:exon
so has part: feature:447146-447280:-1:exon
so has part: feature:445474-445647:-1:exon
so has part: feature:443919-443979:-1:exon
so has part: feature:442580-442734:-1:exon
so has part: feature:440981-441022:-1:exon
so has part: feature:439112-439212:-1:exon
so has part: feature:436115-436206:-1:exon
so has part: feature:435204-435220:-1:exon

XP_032940336.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:458992-459069:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458246-458336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457908-458008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:455932-456164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453112-453259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449625-449780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448650-448764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448489-448559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447146-447280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445474-445647:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443919-443979:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:442580-442734:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:440981-441022:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:439112-439212:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:436115-436206:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:435204-435220:-1:exon

PPP2R1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PPP2R1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform isoform X2
translation: MAAADGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTALVGGPEFVHCLLPPLESLATVEETVVRDKAVESLRAVSHEHSPPDLEGHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSPVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELEHVKSEIIPMFSNLASDEQDSVRLLAVEACVSIAQLLPQEELEGLVMPTLRQAAEDKSWRVRYMVADKFTELQRAVGPEITKTDLVGAFQSLMKDCEAEVRAAASHKVKEFCENLSPDCREAVIMGQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTVEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLRKLVERFGHTWAQGTIVPKVLAMAADPNYLHRMTTLFCINVLSEVCGQEVTTQQMLPTVLRMAADAVANVRFNVAKSLQRIGPILDSGTLQTEVKPVLEKLTQDQDVDVKYFAQEALTVLALA
SIO_010081: PPP2R1A
subclass of: SO_0000673
so part of: PPP2R1A
location: complement(join(435204..435220,436115..436206,439112..439212,441729..441770,442580..442734,443919..443979,445474..445647,447146..447280,448489..448559,448650..448764,449625..449780,453112..453259,455932..456164,457908..458008,458246..458336,458992..459069))
location: region:435204-459069:-1
so has part: feature:458992-459069:-1:exon
so has part: feature:458246-458336:-1:exon
so has part: feature:457908-458008:-1:exon
so has part: feature:455932-456164:-1:exon
so has part: feature:453112-453259:-1:exon
so has part: feature:449625-449780:-1:exon
so has part: feature:448650-448764:-1:exon
so has part: feature:448489-448559:-1:exon
so has part: feature:447146-447280:-1:exon
so has part: feature:445474-445647:-1:exon
so has part: feature:443919-443979:-1:exon
so has part: feature:442580-442734:-1:exon
so has part: feature:441729-441770:-1:exon
so has part: feature:439112-439212:-1:exon
so has part: feature:436115-436206:-1:exon
so has part: feature:435204-435220:-1:exon

XP_032940335.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:458992-459069:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458246-458336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457908-458008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:455932-456164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453112-453259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449625-449780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448650-448764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448489-448559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447146-447280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445474-445647:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443919-443979:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:442580-442734:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:441729-441770:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:439112-439212:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:436115-436206:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:435204-435220:-1:exon

PPP2R1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PPP2R1A
product: protein phosphatase 2 scaffold subunit Aalpha, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 149 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_033084446.1
SIO_010081: PPP2R1A
subclass of: SO_0000673
so part of: PPP2R1A
location: complement(join(439969..440190,442580..442734,443919..443979,445474..445647,447146..447280,448489..448559,448650..448764,449625..449780,453112..453259,455932..456164,457908..458008,458246..458336,458992..459152))
location: region:439969-459152:-1
so has part: feature:458992-459152:-1:exon
so has part: feature:458246-458336:-1:exon
so has part: feature:457908-458008:-1:exon
so has part: feature:455932-456164:-1:exon
so has part: feature:453112-453259:-1:exon
so has part: feature:449625-449780:-1:exon
so has part: feature:448650-448764:-1:exon
so has part: feature:448489-448559:-1:exon
so has part: feature:447146-447280:-1:exon
so has part: feature:445474-445647:-1:exon
so has part: feature:443919-443979:-1:exon
so has part: feature:442580-442734:-1:exon
so has part: feature:439969-440190:-1:exon

position:439969:-1
position: 439969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458992-459152:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458246-458336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457908-458008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:455932-456164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453112-453259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449625-449780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448650-448764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448489-448559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447146-447280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445474-445647:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443919-443979:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:442580-442734:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:439969-440190:-1:exon

position:440190:-1
position: 440190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPP2R1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PPP2R1A
product: protein phosphatase 2 scaffold subunit Aalpha, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 149 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033084448.1
SIO_010081: PPP2R1A
subclass of: SO_0000673
so part of: PPP2R1A
location: complement(join(439969..440163,440996..441022,442580..442734,443919..443979,445474..445647,447146..447280,448489..448559,448650..448764,449625..449780,453112..453259,455932..456164,457908..458008,458246..458336,458992..459152))
location: region:439969-459152:-1
so has part: feature:458992-459152:-1:exon
so has part: feature:458246-458336:-1:exon
so has part: feature:457908-458008:-1:exon
so has part: feature:455932-456164:-1:exon
so has part: feature:453112-453259:-1:exon
so has part: feature:449625-449780:-1:exon
so has part: feature:448650-448764:-1:exon
so has part: feature:448489-448559:-1:exon
so has part: feature:447146-447280:-1:exon
so has part: feature:445474-445647:-1:exon
so has part: feature:443919-443979:-1:exon
so has part: feature:442580-442734:-1:exon
so has part: feature:440996-441022:-1:exon
so has part: feature:439969-440163:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:458992-459152:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458246-458336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457908-458008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:455932-456164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453112-453259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449625-449780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448650-448764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448489-448559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447146-447280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445474-445647:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443919-443979:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:442580-442734:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:440996-441022:-1:exon

position:440996:-1
position: 440996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:439969-440163:-1:exon

position:440163:-1
position: 440163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPP2R1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PPP2R1A
product: protein phosphatase 2 scaffold subunit Aalpha, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 149 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033084447.1
SIO_010081: PPP2R1A
subclass of: SO_0000673
so part of: PPP2R1A
location: complement(join(439969..440163,441744..441770,442580..442734,443919..443979,445474..445647,447146..447280,448489..448559,448650..448764,449625..449780,453112..453259,455932..456164,457908..458008,458246..458336,458992..459152))
location: region:439969-459152:-1
so has part: feature:458992-459152:-1:exon
so has part: feature:458246-458336:-1:exon
so has part: feature:457908-458008:-1:exon
so has part: feature:455932-456164:-1:exon
so has part: feature:453112-453259:-1:exon
so has part: feature:449625-449780:-1:exon
so has part: feature:448650-448764:-1:exon
so has part: feature:448489-448559:-1:exon
so has part: feature:447146-447280:-1:exon
so has part: feature:445474-445647:-1:exon
so has part: feature:443919-443979:-1:exon
so has part: feature:442580-442734:-1:exon
so has part: feature:441744-441770:-1:exon
so has part: feature:439969-440163:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:458992-459152:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458246-458336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457908-458008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:455932-456164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453112-453259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449625-449780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448650-448764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448489-448559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447146-447280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445474-445647:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443919-443979:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:442580-442734:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:441744-441770:-1:exon

position:441744:-1
position: 441744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:439969-440163:-1:exon

PPP2R1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PPP2R1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform isoform X5
translation: MAAADGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTALVGGPEFVHCLLPPLESLATVEETVVRDKAVESLRAVSHEHSPPDLEGHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSPVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELEHVKSEIIPMFSNLASDEQDSVRLLAVEACVSIAQLLPQEELEGLVMPTLRQAAEDKSWRVRYMVADKFTELQRAVGPEITKTDLVGAFQSLMKDCEAEVRAAASHKVKEFCENLSPDCREAVIMGQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTVEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLRKLVERFGHTWAQGTIVPKVLAMAADPNYLHRMTTLFCINVLSEVCGQEVTTQQMLPTVLRMALSHLSMSHLSHLCLSHLSHVTCLYLTCISPVSHLSRCCPRCADRK
SIO_010081: PPP2R1A
subclass of: SO_0000673
so part of: PPP2R1A
location: complement(join(439984..440190,442580..442734,443919..443979,445474..445647,447146..447280,448489..448559,448650..448764,449625..449780,453112..453259,455932..456164,457908..458008,458246..458336,458992..459069))
location: region:439984-459069:-1
so has part: feature:458992-459069:-1:exon
so has part: feature:458246-458336:-1:exon
so has part: feature:457908-458008:-1:exon
so has part: feature:455932-456164:-1:exon
so has part: feature:453112-453259:-1:exon
so has part: feature:449625-449780:-1:exon
so has part: feature:448650-448764:-1:exon
so has part: feature:448489-448559:-1:exon
so has part: feature:447146-447280:-1:exon
so has part: feature:445474-445647:-1:exon
so has part: feature:443919-443979:-1:exon
so has part: feature:442580-442734:-1:exon
so has part: feature:439984-440190:-1:exon

XP_032940337.1
type: Protein
SIO_000068: ncbiprotein

position:439984:-1
position: 439984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458992-459069:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458246-458336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457908-458008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:455932-456164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453112-453259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449625-449780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448650-448764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448489-448559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447146-447280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445474-445647:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443919-443979:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:442580-442734:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:439984-440190:-1:exon

PPP2R1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PPP2R1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform isoform X7
translation: MAAADGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTALVGGPEFVHCLLPPLESLATVEETVVRDKAVESLRAVSHEHSPPDLEGHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSPVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELEHVKSEIIPMFSNLASDEQDSVRLLAVEACVSIAQLLPQEELEGLVMPTLRQAAEDKSWRVRYMVADKFTELQRAVGPEITKTDLVGAFQSLMKDCEAEVRAAASHKVKEFCENLSPDCREAVIMGQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTVEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLRKLVERFGHTWAQGTIVPKVLAMAADPNYLHRMTTLFCINVLSEVCGQEVTTQQMLPTVLRMALSHLSMSHLSHLCLSHLSHVTCLYLTCISPVSHLSRCCPRCADRK
SIO_010081: PPP2R1A
subclass of: SO_0000673
so part of: PPP2R1A
location: complement(join(439984..440163,440996..441022,442580..442734,443919..443979,445474..445647,447146..447280,448489..448559,448650..448764,449625..449780,453112..453259,455932..456164,457908..458008,458246..458336,458992..459069))
location: region:439984-459069:-1
so has part: feature:458992-459069:-1:exon
so has part: feature:458246-458336:-1:exon
so has part: feature:457908-458008:-1:exon
so has part: feature:455932-456164:-1:exon
so has part: feature:453112-453259:-1:exon
so has part: feature:449625-449780:-1:exon
so has part: feature:448650-448764:-1:exon
so has part: feature:448489-448559:-1:exon
so has part: feature:447146-447280:-1:exon
so has part: feature:445474-445647:-1:exon
so has part: feature:443919-443979:-1:exon
so has part: feature:442580-442734:-1:exon
so has part: feature:440996-441022:-1:exon
so has part: feature:439984-440163:-1:exon

XP_032940339.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:458992-459069:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458246-458336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457908-458008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:455932-456164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453112-453259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449625-449780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448650-448764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448489-448559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447146-447280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445474-445647:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443919-443979:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:442580-442734:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:440996-441022:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:439984-440163:-1:exon

PPP2R1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PPP2R1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform isoform X6
translation: MAAADGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTALVGGPEFVHCLLPPLESLATVEETVVRDKAVESLRAVSHEHSPPDLEGHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSPVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELEHVKSEIIPMFSNLASDEQDSVRLLAVEACVSIAQLLPQEELEGLVMPTLRQAAEDKSWRVRYMVADKFTELQRAVGPEITKTDLVGAFQSLMKDCEAEVRAAASHKVKEFCENLSPDCREAVIMGQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTVEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLRKLVERFGHTWAQGTIVPKVLAMAADPNYLHRMTTLFCINVLSEVCGQEVTTQQMLPTVLRMALSHLSMSHLSHLCLSHLSHVTCLYLTCISPVSHLSRCCPRCADRK
SIO_010081: PPP2R1A
subclass of: SO_0000673
so part of: PPP2R1A
location: complement(join(439984..440163,441744..441770,442580..442734,443919..443979,445474..445647,447146..447280,448489..448559,448650..448764,449625..449780,453112..453259,455932..456164,457908..458008,458246..458336,458992..459069))
location: region:439984-459069:-1
so has part: feature:458992-459069:-1:exon
so has part: feature:458246-458336:-1:exon
so has part: feature:457908-458008:-1:exon
so has part: feature:455932-456164:-1:exon
so has part: feature:453112-453259:-1:exon
so has part: feature:449625-449780:-1:exon
so has part: feature:448650-448764:-1:exon
so has part: feature:448489-448559:-1:exon
so has part: feature:447146-447280:-1:exon
so has part: feature:445474-445647:-1:exon
so has part: feature:443919-443979:-1:exon
so has part: feature:442580-442734:-1:exon
so has part: feature:441744-441770:-1:exon
so has part: feature:439984-440163:-1:exon

XP_032940338.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:458992-459069:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458246-458336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457908-458008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:455932-456164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453112-453259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449625-449780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448650-448764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448489-448559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447146-447280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445474-445647:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443919-443979:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:442580-442734:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:441744-441770:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:439984-440163:-1:exon

PPP2R1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PPP2R1A
product: protein phosphatase 2 scaffold subunit Aalpha, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 149 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_033084450.1
SIO_010081: PPP2R1A
subclass of: SO_0000673
so part of: PPP2R1A
location: complement(join(440298..440498,442580..442734,443919..443979,445474..445647,447146..447280,448489..448559,448650..448764,449625..449780,453112..453259,455932..456164,457908..458008,458246..458336,458992..459152))
location: region:440298-459152:-1
so has part: feature:458992-459152:-1:exon
so has part: feature:458246-458336:-1:exon
so has part: feature:457908-458008:-1:exon
so has part: feature:455932-456164:-1:exon
so has part: feature:453112-453259:-1:exon
so has part: feature:449625-449780:-1:exon
so has part: feature:448650-448764:-1:exon
so has part: feature:448489-448559:-1:exon
so has part: feature:447146-447280:-1:exon
so has part: feature:445474-445647:-1:exon
so has part: feature:443919-443979:-1:exon
so has part: feature:442580-442734:-1:exon
so has part: feature:440298-440498:-1:exon

position:440298:-1
position: 440298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458992-459152:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458246-458336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457908-458008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:455932-456164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453112-453259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449625-449780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448650-448764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448489-448559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447146-447280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445474-445647:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443919-443979:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:442580-442734:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:440298-440498:-1:exon

position:440498:-1
position: 440498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPP2R1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PPP2R1A
product: protein phosphatase 2 scaffold subunit Aalpha, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 149 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033084452.1
SIO_010081: PPP2R1A
subclass of: SO_0000673
so part of: PPP2R1A
location: complement(join(440298..440456,440981..441022,442580..442734,443919..443979,445474..445647,447146..447280,448489..448559,448650..448764,449625..449780,453112..453259,455932..456164,457908..458008,458246..458336,458992..459152))
location: region:440298-459152:-1
so has part: feature:458992-459152:-1:exon
so has part: feature:458246-458336:-1:exon
so has part: feature:457908-458008:-1:exon
so has part: feature:455932-456164:-1:exon
so has part: feature:453112-453259:-1:exon
so has part: feature:449625-449780:-1:exon
so has part: feature:448650-448764:-1:exon
so has part: feature:448489-448559:-1:exon
so has part: feature:447146-447280:-1:exon
so has part: feature:445474-445647:-1:exon
so has part: feature:443919-443979:-1:exon
so has part: feature:442580-442734:-1:exon
so has part: feature:440981-441022:-1:exon
so has part: feature:440298-440456:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:458992-459152:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458246-458336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457908-458008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:455932-456164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453112-453259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449625-449780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448650-448764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448489-448559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447146-447280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445474-445647:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443919-443979:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:442580-442734:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:440981-441022:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:440298-440456:-1:exon

position:440456:-1
position: 440456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPP2R1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PPP2R1A
product: protein phosphatase 2 scaffold subunit Aalpha, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 149 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033084453.1
SIO_010081: PPP2R1A
subclass of: SO_0000673
so part of: PPP2R1A
location: complement(join(440298..440471,441443..441469,442580..442734,443919..443979,445474..445647,447146..447280,448489..448559,448650..448764,449625..449780,453112..453259,455932..456164,457908..458008,458246..458336,458992..459152))
location: region:440298-459152:-1
so has part: feature:458992-459152:-1:exon
so has part: feature:458246-458336:-1:exon
so has part: feature:457908-458008:-1:exon
so has part: feature:455932-456164:-1:exon
so has part: feature:453112-453259:-1:exon
so has part: feature:449625-449780:-1:exon
so has part: feature:448650-448764:-1:exon
so has part: feature:448489-448559:-1:exon
so has part: feature:447146-447280:-1:exon
so has part: feature:445474-445647:-1:exon
so has part: feature:443919-443979:-1:exon
so has part: feature:442580-442734:-1:exon
so has part: feature:441443-441469:-1:exon
so has part: feature:440298-440471:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:458992-459152:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458246-458336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457908-458008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:455932-456164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453112-453259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449625-449780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448650-448764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448489-448559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447146-447280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445474-445647:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443919-443979:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:442580-442734:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:441443-441469:-1:exon

position:441443:-1
position: 441443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441469:-1
position: 441469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:440298-440471:-1:exon

position:440471:-1
position: 440471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPP2R1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PPP2R1A
product: protein phosphatase 2 scaffold subunit Aalpha, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 149 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033084455.1
SIO_010081: PPP2R1A
subclass of: SO_0000673
so part of: PPP2R1A
location: complement(join(440298..440471,441744..441770,442580..442734,443919..443979,445474..445647,447146..447280,448489..448559,448650..448764,449625..449780,453112..453259,455932..456164,457908..458008,458246..458336,458992..459152))
location: region:440298-459152:-1
so has part: feature:458992-459152:-1:exon
so has part: feature:458246-458336:-1:exon
so has part: feature:457908-458008:-1:exon
so has part: feature:455932-456164:-1:exon
so has part: feature:453112-453259:-1:exon
so has part: feature:449625-449780:-1:exon
so has part: feature:448650-448764:-1:exon
so has part: feature:448489-448559:-1:exon
so has part: feature:447146-447280:-1:exon
so has part: feature:445474-445647:-1:exon
so has part: feature:443919-443979:-1:exon
so has part: feature:442580-442734:-1:exon
so has part: feature:441744-441770:-1:exon
so has part: feature:440298-440471:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:458992-459152:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458246-458336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457908-458008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:455932-456164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453112-453259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449625-449780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448650-448764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448489-448559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447146-447280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445474-445647:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443919-443979:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:442580-442734:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:441744-441770:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:440298-440471:-1:exon

PPP2R1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PPP2R1A
product: protein phosphatase 2 scaffold subunit Aalpha, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 149 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033084451.1
SIO_010081: PPP2R1A
subclass of: SO_0000673
so part of: PPP2R1A
location: complement(join(440298..440456,441729..441770,442580..442734,443919..443979,445474..445647,447146..447280,448489..448559,448650..448764,449625..449780,453112..453259,455932..456164,457908..458008,458246..458336,458992..459152))
location: region:440298-459152:-1
so has part: feature:458992-459152:-1:exon
so has part: feature:458246-458336:-1:exon
so has part: feature:457908-458008:-1:exon
so has part: feature:455932-456164:-1:exon
so has part: feature:453112-453259:-1:exon
so has part: feature:449625-449780:-1:exon
so has part: feature:448650-448764:-1:exon
so has part: feature:448489-448559:-1:exon
so has part: feature:447146-447280:-1:exon
so has part: feature:445474-445647:-1:exon
so has part: feature:443919-443979:-1:exon
so has part: feature:442580-442734:-1:exon
so has part: feature:441729-441770:-1:exon
so has part: feature:440298-440456:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:458992-459152:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458246-458336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457908-458008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:455932-456164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453112-453259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449625-449780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448650-448764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448489-448559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447146-447280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445474-445647:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443919-443979:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:442580-442734:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:441729-441770:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:440298-440456:-1:exon

PPP2R1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PPP2R1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform isoform X9
translation: MAAADGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTALVGGPEFVHCLLPPLESLATVEETVVRDKAVESLRAVSHEHSPPDLEGHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSPVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELEHVKSEIIPMFSNLASDEQDSVRLLAVEACVSIAQLLPQEELEGLVMPTLRQAAEDKSWRVRYMVADKFTELQRAVGPEITKTDLVGAFQSLMKDCEAEVRAAASHKVKEFCENLSPDCREAVIMGQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTVEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLRKLVERFGHTWAQGTIVPKVLAMAADPNYLHRMTTLFCINVLSEVCGQEVTTQQMLPTVLRMALSHLSCVTCVYHTCHTCISPVSPVSHLSRCCPRCADRK
SIO_010081: PPP2R1A
subclass of: SO_0000673
so part of: PPP2R1A
location: complement(join(440313..440498,442580..442734,443919..443979,445474..445647,447146..447280,448489..448559,448650..448764,449625..449780,453112..453259,455932..456164,457908..458008,458246..458336,458992..459069))
location: region:440313-459069:-1
so has part: feature:458992-459069:-1:exon
so has part: feature:458246-458336:-1:exon
so has part: feature:457908-458008:-1:exon
so has part: feature:455932-456164:-1:exon
so has part: feature:453112-453259:-1:exon
so has part: feature:449625-449780:-1:exon
so has part: feature:448650-448764:-1:exon
so has part: feature:448489-448559:-1:exon
so has part: feature:447146-447280:-1:exon
so has part: feature:445474-445647:-1:exon
so has part: feature:443919-443979:-1:exon
so has part: feature:442580-442734:-1:exon
so has part: feature:440313-440498:-1:exon

XP_032940341.1
type: Protein
SIO_000068: ncbiprotein

position:440313:-1
position: 440313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458992-459069:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458246-458336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457908-458008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:455932-456164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453112-453259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449625-449780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448650-448764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448489-448559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447146-447280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445474-445647:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443919-443979:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:442580-442734:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:440313-440498:-1:exon

PPP2R1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PPP2R1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform isoform X11
translation: MAAADGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTALVGGPEFVHCLLPPLESLATVEETVVRDKAVESLRAVSHEHSPPDLEGHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSPVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELEHVKSEIIPMFSNLASDEQDSVRLLAVEACVSIAQLLPQEELEGLVMPTLRQAAEDKSWRVRYMVADKFTELQRAVGPEITKTDLVGAFQSLMKDCEAEVRAAASHKVKEFCENLSPDCREAVIMGQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTVEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLRKLVERFGHTWAQGTIVPKVLAMAADPNYLHRMTTLFCINVLSEVCGQEVTTQQMLPTVLRMALSHLSCVTCVYHTCHTCISPVSPVSHLSRCCPRCADRK
SIO_010081: PPP2R1A
subclass of: SO_0000673
so part of: PPP2R1A
location: complement(join(440313..440456,440981..441022,442580..442734,443919..443979,445474..445647,447146..447280,448489..448559,448650..448764,449625..449780,453112..453259,455932..456164,457908..458008,458246..458336,458992..459069))
location: region:440313-459069:-1
so has part: feature:458992-459069:-1:exon
so has part: feature:458246-458336:-1:exon
so has part: feature:457908-458008:-1:exon
so has part: feature:455932-456164:-1:exon
so has part: feature:453112-453259:-1:exon
so has part: feature:449625-449780:-1:exon
so has part: feature:448650-448764:-1:exon
so has part: feature:448489-448559:-1:exon
so has part: feature:447146-447280:-1:exon
so has part: feature:445474-445647:-1:exon
so has part: feature:443919-443979:-1:exon
so has part: feature:442580-442734:-1:exon
so has part: feature:440981-441022:-1:exon
so has part: feature:440313-440456:-1:exon

XP_032940343.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:458992-459069:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458246-458336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457908-458008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:455932-456164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453112-453259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449625-449780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448650-448764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448489-448559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447146-447280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445474-445647:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443919-443979:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:442580-442734:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:440981-441022:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:440313-440456:-1:exon

PPP2R1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PPP2R1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform isoform X12
translation: MAAADGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTALVGGPEFVHCLLPPLESLATVEETVVRDKAVESLRAVSHEHSPPDLEGHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSPVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELEHVKSEIIPMFSNLASDEQDSVRLLAVEACVSIAQLLPQEELEGLVMPTLRQAAEDKSWRVRYMVADKFTELQRAVGPEITKTDLVGAFQSLMKDCEAEVRAAASHKVKEFCENLSPDCREAVIMGQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTVEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLRKLVERFGHTWAQGTIVPKVLAMAADPNYLHRMTTLFCINVLSEVCGQEVTTQQMLPTVLRMALSHLSCVTCVYHTCHTCISPVSPVSHLSRCCPRCADRK
SIO_010081: PPP2R1A
subclass of: SO_0000673
so part of: PPP2R1A
location: complement(join(440313..440471,441443..441469,442580..442734,443919..443979,445474..445647,447146..447280,448489..448559,448650..448764,449625..449780,453112..453259,455932..456164,457908..458008,458246..458336,458992..459069))
location: region:440313-459069:-1
so has part: feature:458992-459069:-1:exon
so has part: feature:458246-458336:-1:exon
so has part: feature:457908-458008:-1:exon
so has part: feature:455932-456164:-1:exon
so has part: feature:453112-453259:-1:exon
so has part: feature:449625-449780:-1:exon
so has part: feature:448650-448764:-1:exon
so has part: feature:448489-448559:-1:exon
so has part: feature:447146-447280:-1:exon
so has part: feature:445474-445647:-1:exon
so has part: feature:443919-443979:-1:exon
so has part: feature:442580-442734:-1:exon
so has part: feature:441443-441469:-1:exon
so has part: feature:440313-440471:-1:exon

XP_032940344.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:458992-459069:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458246-458336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457908-458008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:455932-456164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453112-453259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449625-449780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448650-448764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448489-448559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447146-447280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445474-445647:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443919-443979:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:442580-442734:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:441443-441469:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:440313-440471:-1:exon

PPP2R1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PPP2R1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform isoform X13
translation: MAAADGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTALVGGPEFVHCLLPPLESLATVEETVVRDKAVESLRAVSHEHSPPDLEGHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSPVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELEHVKSEIIPMFSNLASDEQDSVRLLAVEACVSIAQLLPQEELEGLVMPTLRQAAEDKSWRVRYMVADKFTELQRAVGPEITKTDLVGAFQSLMKDCEAEVRAAASHKVKEFCENLSPDCREAVIMGQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTVEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLRKLVERFGHTWAQGTIVPKVLAMAADPNYLHRMTTLFCINVLSEVCGQEVTTQQMLPTVLRMALSHLSCVTCVYHTCHTCISPVSPVSHLSRCCPRCADRK
SIO_010081: PPP2R1A
subclass of: SO_0000673
so part of: PPP2R1A
location: complement(join(440313..440471,441744..441770,442580..442734,443919..443979,445474..445647,447146..447280,448489..448559,448650..448764,449625..449780,453112..453259,455932..456164,457908..458008,458246..458336,458992..459069))
location: region:440313-459069:-1
so has part: feature:458992-459069:-1:exon
so has part: feature:458246-458336:-1:exon
so has part: feature:457908-458008:-1:exon
so has part: feature:455932-456164:-1:exon
so has part: feature:453112-453259:-1:exon
so has part: feature:449625-449780:-1:exon
so has part: feature:448650-448764:-1:exon
so has part: feature:448489-448559:-1:exon
so has part: feature:447146-447280:-1:exon
so has part: feature:445474-445647:-1:exon
so has part: feature:443919-443979:-1:exon
so has part: feature:442580-442734:-1:exon
so has part: feature:441744-441770:-1:exon
so has part: feature:440313-440471:-1:exon

XP_032940346.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:458992-459069:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458246-458336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457908-458008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:455932-456164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453112-453259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449625-449780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448650-448764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448489-448559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447146-447280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445474-445647:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443919-443979:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:442580-442734:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:441744-441770:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:440313-440471:-1:exon

PPP2R1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PPP2R1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform isoform X10
translation: MAAADGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTALVGGPEFVHCLLPPLESLATVEETVVRDKAVESLRAVSHEHSPPDLEGHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSPVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELEHVKSEIIPMFSNLASDEQDSVRLLAVEACVSIAQLLPQEELEGLVMPTLRQAAEDKSWRVRYMVADKFTELQRAVGPEITKTDLVGAFQSLMKDCEAEVRAAASHKVKEFCENLSPDCREAVIMGQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTVEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLRKLVERFGHTWAQGTIVPKVLAMAADPNYLHRMTTLFCINVLSEVCGQEVTTQQMLPTVLRMALSHLSCVTCVYHTCHTCISPVSPVSHLSRCCPRCADRK
SIO_010081: PPP2R1A
subclass of: SO_0000673
so part of: PPP2R1A
location: complement(join(440313..440456,441729..441770,442580..442734,443919..443979,445474..445647,447146..447280,448489..448559,448650..448764,449625..449780,453112..453259,455932..456164,457908..458008,458246..458336,458992..459069))
location: region:440313-459069:-1
so has part: feature:458992-459069:-1:exon
so has part: feature:458246-458336:-1:exon
so has part: feature:457908-458008:-1:exon
so has part: feature:455932-456164:-1:exon
so has part: feature:453112-453259:-1:exon
so has part: feature:449625-449780:-1:exon
so has part: feature:448650-448764:-1:exon
so has part: feature:448489-448559:-1:exon
so has part: feature:447146-447280:-1:exon
so has part: feature:445474-445647:-1:exon
so has part: feature:443919-443979:-1:exon
so has part: feature:442580-442734:-1:exon
so has part: feature:441729-441770:-1:exon
so has part: feature:440313-440456:-1:exon

XP_032940342.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:458992-459069:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458246-458336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457908-458008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:455932-456164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453112-453259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449625-449780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448650-448764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448489-448559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447146-447280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445474-445647:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443919-443979:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:442580-442734:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:441729-441770:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:440313-440456:-1:exon

PPP2R1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PPP2R1A
product: protein phosphatase 2 scaffold subunit Aalpha, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 149 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033084449.1
SIO_010081: PPP2R1A
subclass of: SO_0000673
so part of: PPP2R1A
location: complement(join(440645..440854,442580..442734,443919..443979,445474..445647,447146..447280,448489..448559,448650..448764,449625..449780,453112..453259,455932..456164,457908..458008,458246..458336,458992..459152))
location: region:440645-459152:-1
so has part: feature:458992-459152:-1:exon
so has part: feature:458246-458336:-1:exon
so has part: feature:457908-458008:-1:exon
so has part: feature:455932-456164:-1:exon
so has part: feature:453112-453259:-1:exon
so has part: feature:449625-449780:-1:exon
so has part: feature:448650-448764:-1:exon
so has part: feature:448489-448559:-1:exon
so has part: feature:447146-447280:-1:exon
so has part: feature:445474-445647:-1:exon
so has part: feature:443919-443979:-1:exon
so has part: feature:442580-442734:-1:exon
so has part: feature:440645-440854:-1:exon

position:440645:-1
position: 440645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458992-459152:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458246-458336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457908-458008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:455932-456164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453112-453259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449625-449780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448650-448764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448489-448559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447146-447280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445474-445647:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443919-443979:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:442580-442734:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:440645-440854:-1:exon

position:440854:-1
position: 440854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPP2R1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PPP2R1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform isoform X8
translation: MAAADGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTALVGGPEFVHCLLPPLESLATVEETVVRDKAVESLRAVSHEHSPPDLEGHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSPVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELEHVKSEIIPMFSNLASDEQDSVRLLAVEACVSIAQLLPQEELEGLVMPTLRQAAEDKSWRVRYMVADKFTELQRAVGPEITKTDLVGAFQSLMKDCEAEVRAAASHKVKEFCENLSPDCREAVIMGQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTVEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLRKLVERFGHTWAQGTIVPKVLAMAADPNYLHRMTTLFCINVLSEVCGQEVTTQQMLPWPCHTCPCHTCHTCVYHTCPMLPVHVTPLTPVQSHLPRCSQRCVARR
SIO_010081: PPP2R1A
subclass of: SO_0000673
so part of: PPP2R1A
location: complement(join(440660..440854,442580..442734,443919..443979,445474..445647,447146..447280,448489..448559,448650..448764,449625..449780,453112..453259,455932..456164,457908..458008,458246..458336,458992..459069))
location: region:440660-459069:-1
so has part: feature:458992-459069:-1:exon
so has part: feature:458246-458336:-1:exon
so has part: feature:457908-458008:-1:exon
so has part: feature:455932-456164:-1:exon
so has part: feature:453112-453259:-1:exon
so has part: feature:449625-449780:-1:exon
so has part: feature:448650-448764:-1:exon
so has part: feature:448489-448559:-1:exon
so has part: feature:447146-447280:-1:exon
so has part: feature:445474-445647:-1:exon
so has part: feature:443919-443979:-1:exon
so has part: feature:442580-442734:-1:exon
so has part: feature:440660-440854:-1:exon

XP_032940340.1
type: Protein
SIO_000068: ncbiprotein

position:440660:-1
position: 440660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458992-459069:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:458246-458336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457908-458008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:455932-456164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453112-453259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449625-449780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448650-448764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448489-448559:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447146-447280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445474-445647:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:443919-443979:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:442580-442734:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:440660-440854:-1:exon

LOC117010189
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010189
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 441025..441565
location: region:441025-441565:1
so has part: feature:441025-441565:1:exon
subclass of: SO_0000011

117010189
type: Gene
SIO_000068: ncbigene

position:441025:1
position: 441025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441565:1
position: 441565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441025-441565:1:exon

LOC117010189
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117010189
product: uncharacterized LOC117010189, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004420580.1
SIO_010081: LOC117010189
subclass of: SO_0000673
so part of: LOC117010189
location: join(441025..441045,441081..441204,441540..441565)
location: region:441025-441565:1
so has part: feature:441025-441045:1:exon
so has part: feature:441081-441204:1:exon
so has part: feature:441540-441565:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:441025-441045:1:exon

position:441045:1
position: 441045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:441081-441204:1:exon

position:441081:1
position: 441081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441204:1
position: 441204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:441540-441565:1:exon

position:441540:1
position: 441540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117010189
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117010189
product: uncharacterized LOC117010189, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004420581.1
SIO_010081: LOC117010189
subclass of: SO_0000673
so part of: LOC117010189
location: join(441025..441045,441081..441193,441356..441393)
location: region:441025-441393:1
so has part: feature:441025-441045:1:exon
so has part: feature:441081-441193:1:exon
so has part: feature:441356-441393:1:exon

position:441393:1
position: 441393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441025-441045:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:441081-441193:1:exon

position:441193:1
position: 441193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:441356-441393:1:exon

position:441356:1
position: 441356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ETFB
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: ETFB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(460090..469330)
location: region:460090-469330:-1
so has part: feature:460090-469330:-1:exon
subclass of: SO_0000010

117010186
type: Gene
SIO_000068: ncbigene

position:460090:-1
position: 460090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:469330:-1
position: 469330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460090-469330:-1:exon

ETFB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ETFB
product: electron transfer flavoprotein subunit beta, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033084469.1
SIO_010081: ETFB
subclass of: SO_0000673
so part of: ETFB
location: complement(join(460090..460109,461051..461243,462909..463067,463412..463474,465226..465378,467991..468149,469213..469329))
location: region:460090-469329:-1
so has part: feature:469213-469329:-1:exon
so has part: feature:467991-468149:-1:exon
so has part: feature:465226-465378:-1:exon
so has part: feature:463412-463474:-1:exon
so has part: feature:462909-463067:-1:exon
so has part: feature:461051-461243:-1:exon
so has part: feature:460090-460109:-1:exon

position:469329:-1
position: 469329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469213-469329:-1:exon

position:469213:-1
position: 469213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:467991-468149:-1:exon

position:467991:-1
position: 467991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:468149:-1
position: 468149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:465226-465378:-1:exon

position:465226:-1
position: 465226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465378:-1
position: 465378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:463412-463474:-1:exon

position:463412:-1
position: 463412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463474:-1
position: 463474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:462909-463067:-1:exon

position:462909:-1
position: 462909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463067:-1
position: 463067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:461051-461243:-1:exon

position:461051:-1
position: 461051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461243:-1
position: 461243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:460090-460109:-1:exon

position:460109:-1
position: 460109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ETFB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ETFB
product: electron transfer flavoprotein subunit beta, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033084467.2
SIO_010081: ETFB
subclass of: SO_0000673
so part of: ETFB
location: complement(join(460181..460886,461061..461243,462909..463067,463412..463474,465226..465378,467991..468149,469213..469330))
location: region:460181-469330:-1
so has part: feature:469213-469330:-1:exon
so has part: feature:467991-468149:-1:exon
so has part: feature:465226-465378:-1:exon
so has part: feature:463412-463474:-1:exon
so has part: feature:462909-463067:-1:exon
so has part: feature:461061-461243:-1:exon
so has part: feature:460181-460886:-1:exon

position:460181:-1
position: 460181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469213-469330:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:467991-468149:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:465226-465378:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:463412-463474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462909-463067:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:461061-461243:-1:exon

position:461061:-1
position: 461061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:460181-460886:-1:exon

position:460886:-1
position: 460886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ETFB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ETFB
product: electron transfer flavoprotein subunit beta, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033084465.2
SIO_010081: ETFB
subclass of: SO_0000673
so part of: ETFB
location: complement(join(460181..460896,461061..461243,462909..463067,463412..463474,465226..465378,467991..468149,469213..469330))
location: region:460181-469330:-1
so has part: feature:469213-469330:-1:exon
so has part: feature:467991-468149:-1:exon
so has part: feature:465226-465378:-1:exon
so has part: feature:463412-463474:-1:exon
so has part: feature:462909-463067:-1:exon
so has part: feature:461061-461243:-1:exon
so has part: feature:460181-460896:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:469213-469330:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:467991-468149:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:465226-465378:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:463412-463474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462909-463067:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:461061-461243:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:460181-460896:-1:exon

position:460896:-1
position: 460896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ETFB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ETFB
product: electron transfer flavoprotein subunit beta, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033084468.1
SIO_010081: ETFB
subclass of: SO_0000673
so part of: ETFB
location: complement(join(460181..460690,461051..461243,462909..463067,463412..463474,465226..465378,467991..468149,469213..469329))
location: region:460181-469329:-1
so has part: feature:469213-469329:-1:exon
so has part: feature:467991-468149:-1:exon
so has part: feature:465226-465378:-1:exon
so has part: feature:463412-463474:-1:exon
so has part: feature:462909-463067:-1:exon
so has part: feature:461051-461243:-1:exon
so has part: feature:460181-460690:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:469213-469329:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:467991-468149:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:465226-465378:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:463412-463474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462909-463067:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:461051-461243:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:460181-460690:-1:exon

position:460690:-1
position: 460690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ETFB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ETFB
product: electron transfer flavoprotein subunit beta, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033084466.1
SIO_010081: ETFB
subclass of: SO_0000673
so part of: ETFB
location: complement(join(460181..460886,461051..461243,462909..463067,463412..463474,465226..465378,467991..468149,469213..469329))
location: region:460181-469329:-1
so has part: feature:469213-469329:-1:exon
so has part: feature:467991-468149:-1:exon
so has part: feature:465226-465378:-1:exon
so has part: feature:463412-463474:-1:exon
so has part: feature:462909-463067:-1:exon
so has part: feature:461051-461243:-1:exon
so has part: feature:460181-460886:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:469213-469329:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:467991-468149:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:465226-465378:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:463412-463474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462909-463067:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:461051-461243:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:460181-460886:-1:exon

ETFB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ETFB
product: electron transfer flavoprotein subunit beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033084464.1
SIO_010081: ETFB
subclass of: SO_0000673
so part of: ETFB
location: complement(join(460181..460894,461049..461243,462909..463067,463412..463474,465226..465378,467991..468149,469213..469329))
location: region:460181-469329:-1
so has part: feature:469213-469329:-1:exon
so has part: feature:467991-468149:-1:exon
so has part: feature:465226-465378:-1:exon
so has part: feature:463412-463474:-1:exon
so has part: feature:462909-463067:-1:exon
so has part: feature:461049-461243:-1:exon
so has part: feature:460181-460894:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:469213-469329:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:467991-468149:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:465226-465378:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:463412-463474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462909-463067:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:461049-461243:-1:exon

position:461049:-1
position: 461049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:460181-460894:-1:exon

position:460894:-1
position: 460894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ETFB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ETFB
product: electron transfer flavoprotein subunit beta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_033084463.1
SIO_010081: ETFB
subclass of: SO_0000673
so part of: ETFB
location: complement(join(460181..461243,462909..463067,463412..463474,465226..465378,467991..468149,469213..469328))
location: region:460181-469328:-1
so has part: feature:469213-469328:-1:exon
so has part: feature:467991-468149:-1:exon
so has part: feature:465226-465378:-1:exon
so has part: feature:463412-463474:-1:exon
so has part: feature:462909-463067:-1:exon
so has part: feature:460181-461243:-1:exon

position:469328:-1
position: 469328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469213-469328:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:467991-468149:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:465226-465378:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:463412-463474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462909-463067:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:460181-461243:-1:exon

ETFB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ETFB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: electron transfer flavoprotein subunit beta
translation: MAALKVLVGVKRVIDFAVKVRVAPGGAGVQTQGVKHGLNPFCEIALEEAVRLREGGKASEVIAVSLGTKASQETLRTALAVGADRAVLAEVTEGAAPGPLEVASALAALARRLQPQLVLLGKQAIDDDCNQTAQLLAAMLDWPQGTFISRLELESGAVRVQREVDGGLETLRLRLPAVLSADLRLNEPRYATLPNIMKAKKKPLEVIPASDLGVSGGPSRLKVLQVQEPPARAGGEKVENVETLVEKLRQSGRI
SIO_010081: ETFB
subclass of: SO_0000673
so part of: ETFB
location: complement(join(461070..461243,462909..463067,463412..463474,465226..465378,467991..468149,469213..469269))
location: region:461070-469269:-1
so has part: feature:469213-469269:-1:exon
so has part: feature:467991-468149:-1:exon
so has part: feature:465226-465378:-1:exon
so has part: feature:463412-463474:-1:exon
so has part: feature:462909-463067:-1:exon
so has part: feature:461070-461243:-1:exon

XP_032940354.1
type: Protein
SIO_000068: ncbiprotein

position:461070:-1
position: 461070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:469269:-1
position: 469269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469213-469269:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:467991-468149:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:465226-465378:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:463412-463474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462909-463067:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:461070-461243:-1:exon

ETFB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ETFB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: electron transfer flavoprotein subunit beta
translation: MAALKVLVGVKRVIDFAVKVRVAPGGAGVQTQGVKHGLNPFCEIALEEAVRLREGGKASEVIAVSLGTKASQETLRTALAVGADRAVLAEVTEGAAPGPLEVASALAALARRLQPQLVLLGKQAIDDDCNQTAQLLAAMLDWPQGTFISRLELESGAVRVQREVDGGLETLRLRLPAVLSADLRLNEPRYATLPNIMKAKKKPLEVIPASDLGVSGGPSRLKVLQVQEPPARAGGEKVENVETLVEKLRQSGRI
SIO_010081: ETFB
subclass of: SO_0000673
so part of: ETFB
location: complement(join(461070..461243,462909..463067,463412..463474,465226..465378,467991..468149,469213..469269))
location: region:461070-469269:-1
so has part: feature:469213-469269:-1:exon
so has part: feature:467991-468149:-1:exon
so has part: feature:465226-465378:-1:exon
so has part: feature:463412-463474:-1:exon
so has part: feature:462909-463067:-1:exon
so has part: feature:461070-461243:-1:exon

XP_032940355.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469213-469269:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:467991-468149:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:465226-465378:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:463412-463474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462909-463067:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:461070-461243:-1:exon

ETFB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ETFB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: electron transfer flavoprotein subunit beta
translation: MAALKVLVGVKRVIDFAVKVRVAPGGAGVQTQGVKHGLNPFCEIALEEAVRLREGGKASEVIAVSLGTKASQETLRTALAVGADRAVLAEVTEGAAPGPLEVASALAALARRLQPQLVLLGKQAIDDDCNQTAQLLAAMLDWPQGTFISRLELESGAVRVQREVDGGLETLRLRLPAVLSADLRLNEPRYATLPNIMKAKKKPLEVIPASDLGVSGGPSRLKVLQVQEPPARAGGEKVENVETLVEKLRQSGRI
SIO_010081: ETFB
subclass of: SO_0000673
so part of: ETFB
location: complement(join(461070..461243,462909..463067,463412..463474,465226..465378,467991..468149,469213..469269))
location: region:461070-469269:-1
so has part: feature:469213-469269:-1:exon
so has part: feature:467991-468149:-1:exon
so has part: feature:465226-465378:-1:exon
so has part: feature:463412-463474:-1:exon
so has part: feature:462909-463067:-1:exon
so has part: feature:461070-461243:-1:exon

XP_032940356.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469213-469269:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:467991-468149:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:465226-465378:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:463412-463474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462909-463067:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:461070-461243:-1:exon

ETFB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ETFB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: electron transfer flavoprotein subunit beta
translation: MAALKVLVGVKRVIDFAVKVRVAPGGAGVQTQGVKHGLNPFCEIALEEAVRLREGGKASEVIAVSLGTKASQETLRTALAVGADRAVLAEVTEGAAPGPLEVASALAALARRLQPQLVLLGKQAIDDDCNQTAQLLAAMLDWPQGTFISRLELESGAVRVQREVDGGLETLRLRLPAVLSADLRLNEPRYATLPNIMKAKKKPLEVIPASDLGVSGGPSRLKVLQVQEPPARAGGEKVENVETLVEKLRQSGRI
SIO_010081: ETFB
subclass of: SO_0000673
so part of: ETFB
location: complement(join(461070..461243,462909..463067,463412..463474,465226..465378,467991..468149,469213..469269))
location: region:461070-469269:-1
so has part: feature:469213-469269:-1:exon
so has part: feature:467991-468149:-1:exon
so has part: feature:465226-465378:-1:exon
so has part: feature:463412-463474:-1:exon
so has part: feature:462909-463067:-1:exon
so has part: feature:461070-461243:-1:exon

XP_032940357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469213-469269:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:467991-468149:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:465226-465378:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:463412-463474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462909-463067:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:461070-461243:-1:exon

ETFB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ETFB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: electron transfer flavoprotein subunit beta
translation: MAALKVLVGVKRVIDFAVKVRVAPGGAGVQTQGVKHGLNPFCEIALEEAVRLREGGKASEVIAVSLGTKASQETLRTALAVGADRAVLAEVTEGAAPGPLEVASALAALARRLQPQLVLLGKQAIDDDCNQTAQLLAAMLDWPQGTFISRLELESGAVRVQREVDGGLETLRLRLPAVLSADLRLNEPRYATLPNIMKAKKKPLEVIPASDLGVSGGPSRLKVLQVQEPPARAGGEKVENVETLVEKLRQSGRI
SIO_010081: ETFB
subclass of: SO_0000673
so part of: ETFB
location: complement(join(461070..461243,462909..463067,463412..463474,465226..465378,467991..468149,469213..469269))
location: region:461070-469269:-1
so has part: feature:469213-469269:-1:exon
so has part: feature:467991-468149:-1:exon
so has part: feature:465226-465378:-1:exon
so has part: feature:463412-463474:-1:exon
so has part: feature:462909-463067:-1:exon
so has part: feature:461070-461243:-1:exon

XP_032940358.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469213-469269:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:467991-468149:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:465226-465378:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:463412-463474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462909-463067:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:461070-461243:-1:exon

ETFB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ETFB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: electron transfer flavoprotein subunit beta
translation: MAALKVLVGVKRVIDFAVKVRVAPGGAGVQTQGVKHGLNPFCEIALEEAVRLREGGKASEVIAVSLGTKASQETLRTALAVGADRAVLAEVTEGAAPGPLEVASALAALARRLQPQLVLLGKQAIDDDCNQTAQLLAAMLDWPQGTFISRLELESGAVRVQREVDGGLETLRLRLPAVLSADLRLNEPRYATLPNIMKAKKKPLEVIPASDLGVSGGPSRLKVLQVQEPPARAGGEKVENVETLVEKLRQSGRI
SIO_010081: ETFB
subclass of: SO_0000673
so part of: ETFB
location: complement(join(461070..461243,462909..463067,463412..463474,465226..465378,467991..468149,469213..469269))
location: region:461070-469269:-1
so has part: feature:469213-469269:-1:exon
so has part: feature:467991-468149:-1:exon
so has part: feature:465226-465378:-1:exon
so has part: feature:463412-463474:-1:exon
so has part: feature:462909-463067:-1:exon
so has part: feature:461070-461243:-1:exon

XP_032940359.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469213-469269:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:467991-468149:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:465226-465378:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:463412-463474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462909-463067:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:461070-461243:-1:exon

ETFB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ETFB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: electron transfer flavoprotein subunit beta
translation: MAALKVLVGVKRVIDFAVKVRVAPGGAGVQTQGVKHGLNPFCEIALEEAVRLREGGKASEVIAVSLGTKASQETLRTALAVGADRAVLAEVTEGAAPGPLEVASALAALARRLQPQLVLLGKQAIDDDCNQTAQLLAAMLDWPQGTFISRLELESGAVRVQREVDGGLETLRLRLPAVLSADLRLNEPRYATLPNIMKAKKKPLEVIPASDLGVSGGPSRLKVLQVQEPPARAGGEKVENVETLVEKLRQSGRI
SIO_010081: ETFB
subclass of: SO_0000673
so part of: ETFB
location: complement(join(461070..461243,462909..463067,463412..463474,465226..465378,467991..468149,469213..469269))
location: region:461070-469269:-1
so has part: feature:469213-469269:-1:exon
so has part: feature:467991-468149:-1:exon
so has part: feature:465226-465378:-1:exon
so has part: feature:463412-463474:-1:exon
so has part: feature:462909-463067:-1:exon
so has part: feature:461070-461243:-1:exon

XP_032940360.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469213-469269:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:467991-468149:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:465226-465378:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:463412-463474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462909-463067:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:461070-461243:-1:exon

LOC117010188
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010188
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(469951..470394)
location: region:469951-470394:-1
so has part: feature:469951-470394:-1:exon
subclass of: SO_0000011

117010188
type: Gene
SIO_000068: ncbigene

position:469951:-1
position: 469951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:470394:-1
position: 470394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469951-470394:-1:exon

LOC117010188
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117010188
product: uncharacterized LOC117010188
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_004420579.1
SIO_010081: LOC117010188
subclass of: SO_0000673
so part of: LOC117010188
location: complement(join(469951..470164,470237..470394))
location: region:469951-470394:-1
so has part: feature:470237-470394:-1:exon
so has part: feature:469951-470164:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:470237-470394:-1:exon

position:470237:-1
position: 470237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:469951-470164:-1:exon

position:470164:-1
position: 470164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM147
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: TMEM147
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<471285..482733)
location: region:471285-482733:-1
so has part: feature:471285-482733:-1:exon
subclass of: SO_0000010

117010173
type: Gene
SIO_000068: ncbigene

position:471285:-1
position: 471285
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:482733:-1
position: 482733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471285-482733:-1:exon

TMEM147
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: TMEM147
product: transmembrane protein 147
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033084432.1
SIO_010081: TMEM147
subclass of: SO_0000673
so part of: TMEM147
location: complement(join(<471285..471369,472222..472343,473722..473806,477592..477728,480758..480823,482169..482238,482494..482733))
location: region:471285-482733:-1
so has part: feature:482494-482733:-1:exon
so has part: feature:482169-482238:-1:exon
so has part: feature:480758-480823:-1:exon
so has part: feature:477592-477728:-1:exon
so has part: feature:473722-473806:-1:exon
so has part: feature:472222-472343:-1:exon
so has part: feature:471285-471369:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:482494-482733:-1:exon

position:482494:-1
position: 482494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:482169-482238:-1:exon

position:482169:-1
position: 482169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482238:-1
position: 482238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:480758-480823:-1:exon

position:480758:-1
position: 480758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480823:-1
position: 480823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:477592-477728:-1:exon

position:477592:-1
position: 477592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477728:-1
position: 477728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:473722-473806:-1:exon

position:473722:-1
position: 473722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473806:-1
position: 473806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:472222-472343:-1:exon

position:472222:-1
position: 472222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472343:-1
position: 472343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:471285-471369:-1:exon

position:471369:-1
position: 471369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM147
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: TMEM147
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 147
translation: MTLFHFGNCFALAYFPYFITYKCSGLSEYSAFWRCVQAGATYVLVQLGKMLFLATFFPTWEGPSGGFDLVGEFLRATVDAADLGGLQLALGRGGGRGELRILVAALGWASAELLTARCVPLWVGARGVEFDWRHLQMGLDSNISLVRHVAAAALLWASGRHDLPSPLRLPLGGLLVAAAYEGFLIGWAGQVLGLGPWGALGLRALGAAALGLGA
SIO_010081: TMEM147
subclass of: SO_0000673
so part of: TMEM147
location: complement(join(<471285..471369,472222..472343,473722..473806,477592..477728,480758..480823,482169..482238,482494..482570))
location: region:471285-482570:-1
so has part: feature:482494-482570:-1:exon
so has part: feature:482169-482238:-1:exon
so has part: feature:480758-480823:-1:exon
so has part: feature:477592-477728:-1:exon
so has part: feature:473722-473806:-1:exon
so has part: feature:472222-472343:-1:exon
so has part: feature:471285-471369:-1:exon

XP_032940323.1
type: Protein
SIO_000068: ncbiprotein

position:482570:-1
position: 482570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482494-482570:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:482169-482238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:480758-480823:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:477592-477728:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:473722-473806:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:472222-472343:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:471285-471369:-1:exon

LOC117010183
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010183
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(497095..500212)
location: region:497095-500212:-1
so has part: feature:497095-500212:-1:exon
subclass of: SO_0000010

117010183
type: Gene
SIO_000068: ncbigene

position:497095:-1
position: 497095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500212:-1
position: 500212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497095-500212:-1:exon

LOC117010183
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010183
product: hepcidin antimicrobial peptide
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_033084442.1
SIO_010081: LOC117010183
subclass of: SO_0000673
so part of: LOC117010183
location: complement(join(497095..497200,498369..498431,500123..500212))
location: region:497095-500212:-1
so has part: feature:500123-500212:-1:exon
so has part: feature:498369-498431:-1:exon
so has part: feature:497095-497200:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:500123-500212:-1:exon

position:500123:-1
position: 500123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:498369-498431:-1:exon

position:498369:-1
position: 498369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498431:-1
position: 498431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:497095-497200:-1:exon

position:497200:-1
position: 497200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117010183
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010183
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: hepcidin
translation: MRPLQVLPLPHLVLLLLLLSAGTGVAHLGQPQVAPESPLEPKPPALMGDGQHTWARRRRHSPHFPLCSFCCGCCANRGCGFCCRT
SIO_010081: LOC117010183
subclass of: SO_0000673
so part of: LOC117010183
location: complement(join(497095..497200,498369..498431,500123..500212))
location: region:497095-500212:-1
so has part: feature:500123-500212:-1:exon
so has part: feature:498369-498431:-1:exon
so has part: feature:497095-497200:-1:exon

XP_032940333.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:500123-500212:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:498369-498431:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:497095-497200:-1:exon

USF2
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: USF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(510509..529257)
location: region:510509-529257:-1
so has part: feature:510509-529257:-1:exon
subclass of: SO_0000010

117010193
type: Gene
SIO_000068: ncbigene

position:510509:-1
position: 510509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529257:-1
position: 529257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510509-529257:-1:exon

USF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: USF2
product: upstream transcription factor 2, c-fos interacting
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
transcript id: XM_033084474.1
SIO_010081: USF2
subclass of: SO_0000673
so part of: USF2
location: complement(join(510509..510614,513578..513706,518422..518516,520229..520287,520995..521091,522389..522514,526511..526623,528079..528125,529140..529257))
location: region:510509-529257:-1
so has part: feature:529140-529257:-1:exon
so has part: feature:528079-528125:-1:exon
so has part: feature:526511-526623:-1:exon
so has part: feature:522389-522514:-1:exon
so has part: feature:520995-521091:-1:exon
so has part: feature:520229-520287:-1:exon
so has part: feature:518422-518516:-1:exon
so has part: feature:513578-513706:-1:exon
so has part: feature:510509-510614:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:529140-529257:-1:exon

position:529140:-1
position: 529140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:528079-528125:-1:exon

position:528079:-1
position: 528079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528125:-1
position: 528125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:526511-526623:-1:exon

position:526511:-1
position: 526511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526623:-1
position: 526623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:522389-522514:-1:exon

position:522389:-1
position: 522389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522514:-1
position: 522514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:520995-521091:-1:exon

position:520995:-1
position: 520995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:521091:-1
position: 521091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:520229-520287:-1:exon

position:520229:-1
position: 520229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520287:-1
position: 520287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:518422-518516:-1:exon

position:518422:-1
position: 518422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518516:-1
position: 518516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:513578-513706:-1:exon

position:513578:-1
position: 513578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513706:-1
position: 513706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:510509-510614:-1:exon

position:510614:-1
position: 510614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

USF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: USF2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: upstream stimulatory factor 2
translation: MDMLDPGLDSAGSAAPSQEKQQENEEGAELHEGEAPPGEGSVAVAAVPGAPGAFAEGGLQYQFRSDTNGQVLQNPFSNGGSPGSEGGAXGRLTWGGEGAVAVQADPALGQAGGQFYVMMTPQDVLQAGGGAPRGLGPHGHPTHREKLEGPRVPRDERRRAQHNEVERRRRDKINNWIVQLSKIIPECGADGGKAGAQGRILSKACDYVRELRQSNARLQETFKEAERLQVDNDLLRQQVEELKSENAALRAQLQQRGLGGNHEGINQ
SIO_010081: USF2
subclass of: SO_0000673
so part of: USF2
location: complement(join(510528..510614,513578..513706,518422..518516,520229..520287,520995..521091,522389..522514,526511..526623,528079..528125,529140..529189))
location: region:510528-529189:-1
so has part: feature:529140-529189:-1:exon
so has part: feature:528079-528125:-1:exon
so has part: feature:526511-526623:-1:exon
so has part: feature:522389-522514:-1:exon
so has part: feature:520995-521091:-1:exon
so has part: feature:520229-520287:-1:exon
so has part: feature:518422-518516:-1:exon
so has part: feature:513578-513706:-1:exon
so has part: feature:510528-510614:-1:exon

XP_032940365.1
type: Protein
SIO_000068: ncbiprotein

position:510528:-1
position: 510528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529189:-1
position: 529189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529140-529189:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:528079-528125:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526511-526623:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:522389-522514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:520995-521091:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:520229-520287:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:518422-518516:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:513578-513706:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:510528-510614:-1:exon

LOC117010194
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010194
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 525714..526274
location: region:525714-526274:1
so has part: feature:525714-526274:1:exon
subclass of: SO_0000011

117010194
type: Gene
SIO_000068: ncbigene

position:525714:1
position: 525714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526274:1
position: 526274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525714-526274:1:exon

LOC117010194
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117010194
product: uncharacterized LOC117010194
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004420582.1
SIO_010081: LOC117010194
subclass of: SO_0000673
so part of: LOC117010194
location: join(525714..525756,525816..525896,526236..526274)
location: region:525714-526274:1
so has part: feature:525714-525756:1:exon
so has part: feature:525816-525896:1:exon
so has part: feature:526236-526274:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:525714-525756:1:exon

position:525756:1
position: 525756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:525816-525896:1:exon

position:525816:1
position: 525816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525896:1
position: 525896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:526236-526274:1:exon

position:526236:1
position: 526236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAG
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: MAG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(534533..>555340)
location: region:534533-555340:-1
so has part: feature:534533-555340:-1:exon
subclass of: SO_0000010

117010210
type: Gene
SIO_000068: ncbigene

position:534533:-1
position: 534533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555340:-1
position: 555340
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534533-555340:-1:exon

MAG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: MAG
product: myelin associated glycoprotein
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033084504.1
SIO_010081: MAG
subclass of: SO_0000673
so part of: MAG
location: complement(join(534533..534753,535778..535853,536849..536945,537977..538297,540841..541045,541929..541984,547148..547409,548934..549230,555124..>555340))
location: region:534533-555340:-1
so has part: feature:555124-555340:-1:exon
so has part: feature:548934-549230:-1:exon
so has part: feature:547148-547409:-1:exon
so has part: feature:541929-541984:-1:exon
so has part: feature:540841-541045:-1:exon
so has part: feature:537977-538297:-1:exon
so has part: feature:536849-536945:-1:exon
so has part: feature:535778-535853:-1:exon
so has part: feature:534533-534753:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:555124-555340:-1:exon

position:555124:-1
position: 555124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:548934-549230:-1:exon

position:548934:-1
position: 548934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549230:-1
position: 549230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:547148-547409:-1:exon

position:547148:-1
position: 547148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547409:-1
position: 547409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:541929-541984:-1:exon

position:541929:-1
position: 541929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541984:-1
position: 541984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:540841-541045:-1:exon

position:540841:-1
position: 540841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541045:-1
position: 541045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:537977-538297:-1:exon

position:537977:-1
position: 537977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538297:-1
position: 538297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:536849-536945:-1:exon

position:536849:-1
position: 536849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536945:-1
position: 536945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:535778-535853:-1:exon

position:535778:-1
position: 535778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535853:-1
position: 535853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:534533-534753:-1:exon

position:534753:-1
position: 534753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MAG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: MAG
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: myelin-associated glycoprotein
translation: NYPPVVARSKPGAVHESFAGRARLVGDPGLRDCSLQLGPPLSPELAGRYYFRGDLGGYNQYSFSEHTTLEVMEEPVLEVPAELVAGAVAELRCRVPDSCPRQRPRLRWEGTEELPEVSESERREDAAGAGSVVARLRFRPRREDGGRRLGCQVTLPNSSLAFNAGVALDVQYEPQVLEVSGPSEALEGSQVDFGCQAEGRPPPLLTWFRGPQVLREEPGVASLPLHLAQVSPQDSGTYTCVAENRHGRHNRSLELHVAYAPHPPVLNGTLWVVAGDQVSLTCAAASHPAPIVTLARGRRVVAAAVYEPQVRLELPAAAPEDGGEYLCRAENQHGASSLAFNVTVEYPPVLLPESRCAPLGDGAARCVCAAAALPLPVLAFELPSLNLTVAEGHRDFALTAPGGGPGGPGGGPGEAVTAVLTLRGGLEPRLAVLCAARNGHGAARMQLRFHHPAGLVWAKVGPVGAVVAFAVVIALVCYLSQSRRKKASGSPAVTPVTPPGGREAEPRPLQPRWLRGAVGRWALGVGEGPGAPPEPAPPPKPARGPPEEPPEYAEIRVK
SIO_010081: MAG
subclass of: SO_0000673
so part of: MAG
location: complement(join(534607..534753,535778..535853,536849..536945,537977..538297,540841..541045,541929..541984,547148..547409,548934..549230,555124..>555340))
location: region:534607-555340:-1
so has part: feature:555124-555340:-1:exon
so has part: feature:548934-549230:-1:exon
so has part: feature:547148-547409:-1:exon
so has part: feature:541929-541984:-1:exon
so has part: feature:540841-541045:-1:exon
so has part: feature:537977-538297:-1:exon
so has part: feature:536849-536945:-1:exon
so has part: feature:535778-535853:-1:exon
so has part: feature:534607-534753:-1:exon

XP_032940395.1
type: Protein
SIO_000068: ncbiprotein

position:534607:-1
position: 534607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555124-555340:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:548934-549230:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:547148-547409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:541929-541984:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:540841-541045:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:537977-538297:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:536849-536945:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:535778-535853:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534607-534753:-1:exon

LIPE
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LIPE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(558311..560770)
location: region:558311-560770:-1
so has part: feature:558311-560770:-1:exon
subclass of: SO_0000010

117010174
type: Gene
SIO_000068: ncbigene

position:558311:-1
position: 558311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560770:-1
position: 560770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558311-560770:-1:exon

LIPE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LIPE
product: lipase E, hormone sensitive type
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084433.1
SIO_010081: LIPE
subclass of: SO_0000673
so part of: LIPE
location: complement(join(558311..558352,558912..559139,560397..560770))
location: region:558311-560770:-1
so has part: feature:560397-560770:-1:exon
so has part: feature:558912-559139:-1:exon
so has part: feature:558311-558352:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:560397-560770:-1:exon

position:560397:-1
position: 560397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:558912-559139:-1:exon

position:558912:-1
position: 558912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559139:-1
position: 559139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:558311-558352:-1:exon

position:558352:-1
position: 558352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LIPE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LIPE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hormone-sensitive lipase
translation: MDLLQSLQLLARDNLSFFSPSRSTSGTSRRFADAFAALLHHGRHLGPALAHLTQVAPNFDLDEATPGNGYRSLIHVVQVCLDRAVERSRYVAAHRKSLFFRAGANAAEIEAVAAALGQLRALLVLAGKMAAVAKPGCLFPDVGKVEEEEEEEDEEEEEEEGISDVVLREYSTMQNGCFYGRCLGFQIIDWLVLAWLVLV
SIO_010081: LIPE
subclass of: SO_0000673
so part of: LIPE
location: complement(join(558311..558352,558912..559139,560397..560726))
location: region:558311-560726:-1
so has part: feature:560397-560726:-1:exon
so has part: feature:558912-559139:-1:exon
so has part: feature:558311-558352:-1:exon

XP_032940324.1
type: Protein
SIO_000068: ncbiprotein

position:560726:-1
position: 560726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:560397-560726:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:558912-559139:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:558311-558352:-1:exon

PSMC4
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: PSMC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(567477..590501)
location: region:567477-590501:-1
so has part: feature:567477-590501:-1:exon
subclass of: SO_0000010

117010208
type: Gene
SIO_000068: ncbigene

position:567477:-1
position: 567477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590501:-1
position: 590501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:567477-590501:-1:exon

PSMC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PSMC4
product: proteasome 26S subunit, ATPase 4, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084499.1
SIO_010081: PSMC4
subclass of: SO_0000673
so part of: PSMC4
location: complement(join(567477..567725,569364..569419,569974..570142,572760..572836,576093..576260,578869..578962,580713..580822,585498..585644,587378..587564,589615..589713,590397..590501))
location: region:567477-590501:-1
so has part: feature:590397-590501:-1:exon
so has part: feature:589615-589713:-1:exon
so has part: feature:587378-587564:-1:exon
so has part: feature:585498-585644:-1:exon
so has part: feature:580713-580822:-1:exon
so has part: feature:578869-578962:-1:exon
so has part: feature:576093-576260:-1:exon
so has part: feature:572760-572836:-1:exon
so has part: feature:569974-570142:-1:exon
so has part: feature:569364-569419:-1:exon
so has part: feature:567477-567725:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:590397-590501:-1:exon

position:590397:-1
position: 590397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:589615-589713:-1:exon

position:589615:-1
position: 589615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589713:-1
position: 589713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:587378-587564:-1:exon

position:587378:-1
position: 587378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587564:-1
position: 587564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:585498-585644:-1:exon

position:585498:-1
position: 585498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585644:-1
position: 585644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:580713-580822:-1:exon

position:580713:-1
position: 580713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580822:-1
position: 580822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:578869-578962:-1:exon

position:578869:-1
position: 578869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578962:-1
position: 578962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:576093-576260:-1:exon

position:576093:-1
position: 576093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576260:-1
position: 576260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:572760-572836:-1:exon

position:572760:-1
position: 572760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572836:-1
position: 572836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:569974-570142:-1:exon

position:569974:-1
position: 569974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:570142:-1
position: 570142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:569364-569419:-1:exon

position:569364:-1
position: 569364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569419:-1
position: 569419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:567477-567725:-1:exon

position:567725:-1
position: 567725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSMC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PSMC4
product: proteasome 26S subunit, ATPase 4, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084498.1
SIO_010081: PSMC4
subclass of: SO_0000673
so part of: PSMC4
location: complement(join(567477..567725,569364..569419,569974..570142,572760..572836,576093..576260,578869..578962,580713..580763,580972..581030,585498..585644,587378..587564,589615..589713,590397..590501))
location: region:567477-590501:-1
so has part: feature:590397-590501:-1:exon
so has part: feature:589615-589713:-1:exon
so has part: feature:587378-587564:-1:exon
so has part: feature:585498-585644:-1:exon
so has part: feature:580972-581030:-1:exon
so has part: feature:580713-580763:-1:exon
so has part: feature:578869-578962:-1:exon
so has part: feature:576093-576260:-1:exon
so has part: feature:572760-572836:-1:exon
so has part: feature:569974-570142:-1:exon
so has part: feature:569364-569419:-1:exon
so has part: feature:567477-567725:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:590397-590501:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589615-589713:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:587378-587564:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:585498-585644:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:580972-581030:-1:exon

position:580972:-1
position: 580972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581030:-1
position: 581030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:580713-580763:-1:exon

position:580763:-1
position: 580763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:578869-578962:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:576093-576260:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:572760-572836:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:569974-570142:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:569364-569419:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:567477-567725:-1:exon

PSMC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PSMC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 26S proteasome regulatory subunit 6B isoform X1
translation: MEELGLLGEKPQDDVPASAAPRPLPGLSFLVPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQRNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVVYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITGKMNLSEEVDLEDYVARPDKISGADINSICQEGGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK
SIO_010081: PSMC4
subclass of: SO_0000673
so part of: PSMC4
location: complement(join(567612..567725,569364..569419,569974..570142,572760..572836,576093..576260,578869..578962,580713..580822,585498..585644,587378..587564,589615..589713,590397..590432))
location: region:567612-590432:-1
so has part: feature:590397-590432:-1:exon
so has part: feature:589615-589713:-1:exon
so has part: feature:587378-587564:-1:exon
so has part: feature:585498-585644:-1:exon
so has part: feature:580713-580822:-1:exon
so has part: feature:578869-578962:-1:exon
so has part: feature:576093-576260:-1:exon
so has part: feature:572760-572836:-1:exon
so has part: feature:569974-570142:-1:exon
so has part: feature:569364-569419:-1:exon
so has part: feature:567612-567725:-1:exon

XP_032940390.1
type: Protein
SIO_000068: ncbiprotein

position:567612:-1
position: 567612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590432:-1
position: 590432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:590397-590432:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589615-589713:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:587378-587564:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:585498-585644:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:580713-580822:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:578869-578962:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:576093-576260:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:572760-572836:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:569974-570142:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:569364-569419:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:567612-567725:-1:exon

PSMC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PSMC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 26S proteasome regulatory subunit 6B isoform X2
translation: MEELGLLGEKPQDDVPASAAPRPLPGLSFLVPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQRNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVLYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITGKMNLSEEVDLEDYVARPDKISGADINSICQEGGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK
SIO_010081: PSMC4
subclass of: SO_0000673
so part of: PSMC4
location: complement(join(567612..567725,569364..569419,569974..570142,572760..572836,576093..576260,578869..578962,580713..580763,580972..581030,585498..585644,587378..587564,589615..589713,590397..590432))
location: region:567612-590432:-1
so has part: feature:590397-590432:-1:exon
so has part: feature:589615-589713:-1:exon
so has part: feature:587378-587564:-1:exon
so has part: feature:585498-585644:-1:exon
so has part: feature:580972-581030:-1:exon
so has part: feature:580713-580763:-1:exon
so has part: feature:578869-578962:-1:exon
so has part: feature:576093-576260:-1:exon
so has part: feature:572760-572836:-1:exon
so has part: feature:569974-570142:-1:exon
so has part: feature:569364-569419:-1:exon
so has part: feature:567612-567725:-1:exon

XP_032940389.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:590397-590432:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589615-589713:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:587378-587564:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:585498-585644:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:580972-581030:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:580713-580763:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:578869-578962:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:576093-576260:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:572760-572836:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:569974-570142:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:569364-569419:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:567612-567725:-1:exon

PSMC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PSMC4
product: proteasome 26S subunit, ATPase 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033084501.1
SIO_010081: PSMC4
subclass of: SO_0000673
so part of: PSMC4
location: complement(join(568082..568132,568792..568839,569364..569419,569974..570142,572760..572836,576093..576260,578869..578962,580713..580763,580972..581030,585498..585644,587378..587564,589615..589713,590397..590501))
location: region:568082-590501:-1
so has part: feature:590397-590501:-1:exon
so has part: feature:589615-589713:-1:exon
so has part: feature:587378-587564:-1:exon
so has part: feature:585498-585644:-1:exon
so has part: feature:580972-581030:-1:exon
so has part: feature:580713-580763:-1:exon
so has part: feature:578869-578962:-1:exon
so has part: feature:576093-576260:-1:exon
so has part: feature:572760-572836:-1:exon
so has part: feature:569974-570142:-1:exon
so has part: feature:569364-569419:-1:exon
so has part: feature:568792-568839:-1:exon
so has part: feature:568082-568132:-1:exon

position:568082:-1
position: 568082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:590397-590501:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589615-589713:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:587378-587564:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:585498-585644:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:580972-581030:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:580713-580763:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:578869-578962:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:576093-576260:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:572760-572836:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:569974-570142:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:569364-569419:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:568792-568839:-1:exon

position:568792:-1
position: 568792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568839:-1
position: 568839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:568082-568132:-1:exon

position:568132:-1
position: 568132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSMC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PSMC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 26S proteasome regulatory subunit 6B isoform X4
translation: MEELGLLGEKPQDDVPASAAPRPLPGLSFLVPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQRNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVLYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITGKMNLSEEVDLEDYVARPDKISGADINSICQEGGMLAVRENRYIVLAQVTQVWL
SIO_010081: PSMC4
subclass of: SO_0000673
so part of: PSMC4
location: complement(join(568112..568132,568792..568839,569364..569419,569974..570142,572760..572836,576093..576260,578869..578962,580713..580763,580972..581030,585498..585644,587378..587564,589615..589713,590397..590432))
location: region:568112-590432:-1
so has part: feature:590397-590432:-1:exon
so has part: feature:589615-589713:-1:exon
so has part: feature:587378-587564:-1:exon
so has part: feature:585498-585644:-1:exon
so has part: feature:580972-581030:-1:exon
so has part: feature:580713-580763:-1:exon
so has part: feature:578869-578962:-1:exon
so has part: feature:576093-576260:-1:exon
so has part: feature:572760-572836:-1:exon
so has part: feature:569974-570142:-1:exon
so has part: feature:569364-569419:-1:exon
so has part: feature:568792-568839:-1:exon
so has part: feature:568112-568132:-1:exon

XP_032940392.1
type: Protein
SIO_000068: ncbiprotein

position:568112:-1
position: 568112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:590397-590432:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589615-589713:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:587378-587564:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:585498-585644:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:580972-581030:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:580713-580763:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:578869-578962:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:576093-576260:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:572760-572836:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:569974-570142:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:569364-569419:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:568792-568839:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:568112-568132:-1:exon

PSMC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PSMC4
product: proteasome 26S subunit, ATPase 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033084500.1
SIO_010081: PSMC4
subclass of: SO_0000673
so part of: PSMC4
location: complement(join(568390..568425,568792..568839,569364..569419,569974..570142,572760..572836,576093..576260,578869..578962,580713..580763,580972..581030,585498..585644,587378..587564,589615..589713,590397..590501))
location: region:568390-590501:-1
so has part: feature:590397-590501:-1:exon
so has part: feature:589615-589713:-1:exon
so has part: feature:587378-587564:-1:exon
so has part: feature:585498-585644:-1:exon
so has part: feature:580972-581030:-1:exon
so has part: feature:580713-580763:-1:exon
so has part: feature:578869-578962:-1:exon
so has part: feature:576093-576260:-1:exon
so has part: feature:572760-572836:-1:exon
so has part: feature:569974-570142:-1:exon
so has part: feature:569364-569419:-1:exon
so has part: feature:568792-568839:-1:exon
so has part: feature:568390-568425:-1:exon

position:568390:-1
position: 568390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:590397-590501:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589615-589713:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:587378-587564:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:585498-585644:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:580972-581030:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:580713-580763:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:578869-578962:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:576093-576260:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:572760-572836:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:569974-570142:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:569364-569419:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:568792-568839:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:568390-568425:-1:exon

position:568425:-1
position: 568425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSMC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PSMC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 26S proteasome regulatory subunit 6B isoform X3
translation: MEELGLLGEKPQDDVPASAAPRPLPGLSFLVPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQRNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVLYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITGKMNLSEEVDLEDYVARPDKISGADINSICQEGGMLAVRENRYIVLAQVTQVWL
SIO_010081: PSMC4
subclass of: SO_0000673
so part of: PSMC4
location: complement(join(568405..568425,568792..568839,569364..569419,569974..570142,572760..572836,576093..576260,578869..578962,580713..580763,580972..581030,585498..585644,587378..587564,589615..589713,590397..590432))
location: region:568405-590432:-1
so has part: feature:590397-590432:-1:exon
so has part: feature:589615-589713:-1:exon
so has part: feature:587378-587564:-1:exon
so has part: feature:585498-585644:-1:exon
so has part: feature:580972-581030:-1:exon
so has part: feature:580713-580763:-1:exon
so has part: feature:578869-578962:-1:exon
so has part: feature:576093-576260:-1:exon
so has part: feature:572760-572836:-1:exon
so has part: feature:569974-570142:-1:exon
so has part: feature:569364-569419:-1:exon
so has part: feature:568792-568839:-1:exon
so has part: feature:568405-568425:-1:exon

XP_032940391.1
type: Protein
SIO_000068: ncbiprotein

position:568405:-1
position: 568405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:590397-590432:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589615-589713:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:587378-587564:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:585498-585644:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:580972-581030:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:580713-580763:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:578869-578962:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:576093-576260:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:572760-572836:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:569974-570142:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:569364-569419:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:568792-568839:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:568405-568425:-1:exon

BCL3
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: BCL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(591160..612474)
location: region:591160-612474:-1
so has part: feature:591160-612474:-1:exon
subclass of: SO_0000010

117010209
type: Gene
SIO_000068: ncbigene

position:591160:-1
position: 591160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612474:-1
position: 612474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:591160-612474:-1:exon

BCL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: BCL3
product: BCL3 transcription coactivator
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084502.1
SIO_010081: BCL3
subclass of: SO_0000673
so part of: BCL3
location: complement(join(591160..591378,592241..592316,595378..595423,595836..596003,597742..597819,600033..600121,602352..602568,606398..606506,611074..611242,612142..612474))
location: region:591160-612474:-1
so has part: feature:612142-612474:-1:exon
so has part: feature:611074-611242:-1:exon
so has part: feature:606398-606506:-1:exon
so has part: feature:602352-602568:-1:exon
so has part: feature:600033-600121:-1:exon
so has part: feature:597742-597819:-1:exon
so has part: feature:595836-596003:-1:exon
so has part: feature:595378-595423:-1:exon
so has part: feature:592241-592316:-1:exon
so has part: feature:591160-591378:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:612142-612474:-1:exon

position:612142:-1
position: 612142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:611074-611242:-1:exon

position:611074:-1
position: 611074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611242:-1
position: 611242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:606398-606506:-1:exon

position:606398:-1
position: 606398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606506:-1
position: 606506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:602352-602568:-1:exon

position:602352:-1
position: 602352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602568:-1
position: 602568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:600033-600121:-1:exon

position:600033:-1
position: 600033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600121:-1
position: 600121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:597742-597819:-1:exon

position:597742:-1
position: 597742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597819:-1
position: 597819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:595836-596003:-1:exon

position:595836:-1
position: 595836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596003:-1
position: 596003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:595378-595423:-1:exon

position:595378:-1
position: 595378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:595423:-1
position: 595423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:592241-592316:-1:exon

position:592241:-1
position: 592241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592316:-1
position: 592316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:591160-591378:-1:exon

position:591378:-1
position: 591378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BCL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: BCL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: B-cell lymphoma 3 protein
translation: MAEELPVDLRTRRPQNPPKPPQKSRPETSLPLRKRRSAMGGFGGGGGVEPPRPLPLPNPQNRGGPPGKFPKLGGVGAGLKAEPALGILGGGLGVAPPPPPPILGPLPPNFGVPPEPPLGAAIAAATRQDEDGDTPLHIAVAQGALAVARRLVALFLRGGRDLDVYNHLRQTPLHLAVITGQVSLVRLLVAQGASPMAPDRLGRTCAHLACAHLAAAGPRPRILRELLRGPGGAPDLQARDYEGLTPLHVAVASGSRESVLVLLEHGADVDAVDIKSGRSALLHAVESGSEEMAELLLQHGASVNSQSYSGCTALHAAAARGRLRLLRLLLRCGADCGLRNLHNDTAAGVALNSQEPAQRHRRRRGAQLPGDRHPAGKSLETPPGPPKIPPGPPPRQRLGVPAHFRVCSQWGARGGASAPANGRAERPRPSTEHGPIRGGDGEAPPLSPSEAPPTRGAGPGQH
SIO_010081: BCL3
subclass of: SO_0000673
so part of: BCL3
location: complement(join(591174..591378,592241..592316,595378..595423,595836..596003,597742..597819,600033..600121,602352..602568,606398..606506,611074..611242,612142..612373))
location: region:591174-612373:-1
so has part: feature:612142-612373:-1:exon
so has part: feature:611074-611242:-1:exon
so has part: feature:606398-606506:-1:exon
so has part: feature:602352-602568:-1:exon
so has part: feature:600033-600121:-1:exon
so has part: feature:597742-597819:-1:exon
so has part: feature:595836-596003:-1:exon
so has part: feature:595378-595423:-1:exon
so has part: feature:592241-592316:-1:exon
so has part: feature:591174-591378:-1:exon

XP_032940393.1
type: Protein
SIO_000068: ncbiprotein

position:591174:-1
position: 591174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612373:-1
position: 612373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:612142-612373:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:611074-611242:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:606398-606506:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:602352-602568:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:600033-600121:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:597742-597819:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:595836-596003:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:595378-595423:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:592241-592316:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:591174-591378:-1:exon

SCN1B
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: SCN1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 616629..627854
location: region:616629-627854:1
so has part: feature:616629-627854:1:exon
subclass of: SO_0000010

117010190
type: Gene
SIO_000068: ncbigene

position:616629:1
position: 616629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627854:1
position: 627854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:616629-627854:1:exon

SCN1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SCN1B
product: sodium voltage-gated channel beta subunit 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084471.1
SIO_010081: SCN1B
subclass of: SO_0000673
so part of: SCN1B
location: join(616629..617282,619335..619501,621936..622176,624418..624553,627786..627854)
location: region:616629-627854:1
so has part: feature:616629-617282:1:exon
so has part: feature:619335-619501:1:exon
so has part: feature:621936-622176:1:exon
so has part: feature:624418-624553:1:exon
so has part: feature:627786-627854:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:616629-617282:1:exon

position:617282:1
position: 617282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:619335-619501:1:exon

position:619335:1
position: 619335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:619501:1
position: 619501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:621936-622176:1:exon

position:621936:1
position: 621936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622176:1
position: 622176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:624418-624553:1:exon

position:624418:1
position: 624418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:624553:1
position: 624553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:627786-627854:1:exon

position:627786:1
position: 627786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SCN1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SCN1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium channel subunit beta-1
translation: MVGKSRRGSESAEGVRELPKGYGNCRSAAMLLSLLLGLLEVSGALGGCVEVASGTEAVLGAPFRLLCIACKRRSETPAEAESEWFFRPEGNPQFQKILHYSPEEGQWVAPGPFEHVLSWNGSRGTRDLQDLSVFLAAVGRDHAGHYVCGLRRNLTFEGYTYSLARNQSLRLAVVEKARRDLASIVSEILMYVLIVVLTLWLAAEMLYCYRKVAAAAPPPDSASEYLAITSESKENCGGVQAAE
SIO_010081: SCN1B
subclass of: SO_0000673
so part of: SCN1B
location: join(617162..617282,619335..619501,621936..622176,624418..624553,627786..627852)
location: region:617162-627852:1
so has part: feature:617162-617282:1:exon
so has part: feature:619335-619501:1:exon
so has part: feature:621936-622176:1:exon
so has part: feature:624418-624553:1:exon
so has part: feature:627786-627852:1:exon

XP_032940362.1
type: Protein
SIO_000068: ncbiprotein

position:617162:1
position: 617162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627852:1
position: 627852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:617162-617282:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:619335-619501:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:621936-622176:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:624418-624553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:627786-627852:1:exon

LOC117010175
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010175
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 646535..658538
location: region:646535-658538:1
so has part: feature:646535-658538:1:exon
subclass of: SO_0000010

117010175
type: Gene
SIO_000068: ncbigene

position:646535:1
position: 646535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:658538:1
position: 658538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:646535-658538:1:exon

LOC117010175
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010175
product: kallikrein-6-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084434.1
SIO_010081: LOC117010175
subclass of: SO_0000673
so part of: LOC117010175
location: join(646535..646568,650965..651133,653584..653837,654659..654798,658359..658538)
location: region:646535-658538:1
so has part: feature:646535-646568:1:exon
so has part: feature:650965-651133:1:exon
so has part: feature:653584-653837:1:exon
so has part: feature:654659-654798:1:exon
so has part: feature:658359-658538:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:646535-646568:1:exon

position:646568:1
position: 646568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:650965-651133:1:exon

position:650965:1
position: 650965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651133:1
position: 651133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:653584-653837:1:exon

position:653584:1
position: 653584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:653837:1
position: 653837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:654659-654798:1:exon

position:654659:1
position: 654659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654798:1
position: 654798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:658359-658538:1:exon

position:658359:1
position: 658359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117010175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010175
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kallikrein-6-like
translation: MERLLLLLGLTAAAASLDENRIVGGARCERRLHPYQVLLLQPGGGIHCGGVLIGRRWVLTAAHCRTDSPLRVLLGEHNLKEREGAEQCLTWARAFVHPRYLPGRHDSDVMLLRLRSPAHLSERVRPVALPRRCPQVGDRCVVSGWGSTRSPQGAFPDVLQCGEVFTWSNADCAHLYPGAITPNMLCAGGRAGDSTDSCQGDSGGPLVCGGYLQGVVSWGLQVCGQEGKPGVYSRVCAFTAWIRRTIRANGGDDAPGLT
SIO_010081: LOC117010175
subclass of: SO_0000673
so part of: LOC117010175
location: join(646535..646568,650965..651133,653584..653837,654659..654798,658359..658538)
location: region:646535-658538:1
so has part: feature:646535-646568:1:exon
so has part: feature:650965-651133:1:exon
so has part: feature:653584-653837:1:exon
so has part: feature:654659-654798:1:exon
so has part: feature:658359-658538:1:exon

XP_032940325.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:646535-646568:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:650965-651133:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:653584-653837:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:654659-654798:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:658359-658538:1:exon

LOC117010176
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010176
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(661209..672349)
location: region:661209-672349:-1
so has part: feature:661209-672349:-1:exon
subclass of: SO_0000010

117010176
type: Gene
SIO_000068: ncbigene

position:661209:-1
position: 661209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:672349:-1
position: 672349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:661209-672349:-1:exon

LOC117010176
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010176
product: trypsin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
transcript id: XM_033084435.1
SIO_010081: LOC117010176
subclass of: SO_0000673
so part of: LOC117010176
location: complement(join(661209..661394,664324..664460,666136..666461,669880..670039,672337..672349))
location: region:661209-672349:-1
so has part: feature:672337-672349:-1:exon
so has part: feature:669880-670039:-1:exon
so has part: feature:666136-666461:-1:exon
so has part: feature:664324-664460:-1:exon
so has part: feature:661209-661394:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:672337-672349:-1:exon

position:672337:-1
position: 672337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:669880-670039:-1:exon

position:669880:-1
position: 669880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670039:-1
position: 670039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:666136-666461:-1:exon

position:666136:-1
position: 666136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666461:-1
position: 666461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:664324-664460:-1:exon

position:664324:-1
position: 664324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664460:-1
position: 664460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:661209-661394:-1:exon

position:661394:-1
position: 661394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117010176
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010176
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trypsin-like
translation: MEPLALPLPHPGRILGGSECPRGGHAGLVRLFQFDQFVCGGALVSERWVLSAAHCWASHLQVRAGEHDLAQASGHEQFAAAVELVVHPDFGKDSENSRQNPGNSGGNFSRENVLGDSGRSHDLMLIRVEPPFTCGPQVRPLPLPQAPPSAGSTCTVMGWGSTSSPEESYPDVPQCLNVTVLEDSACRDAYGAQVTSDMLCAGLGESGKDSCQGDSGGPLLCSGQLQAVVSWGEFPCGQPDRPGVYARVQPELAWIRAVIGDDGVTSDPVCNTE
SIO_010081: LOC117010176
subclass of: SO_0000673
so part of: LOC117010176
location: complement(join(661209..661394,664324..664460,666136..666461,669880..670039,672337..672349))
location: region:661209-672349:-1
so has part: feature:672337-672349:-1:exon
so has part: feature:669880-670039:-1:exon
so has part: feature:666136-666461:-1:exon
so has part: feature:664324-664460:-1:exon
so has part: feature:661209-661394:-1:exon

XP_032940326.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:672337-672349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:669880-670039:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:666136-666461:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:664324-664460:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:661209-661394:-1:exon

LOC117010196
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010196
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(675051..685464)
location: region:675051-685464:-1
so has part: feature:675051-685464:-1:exon
subclass of: SO_0000010

117010196
type: Gene
SIO_000068: ncbigene

position:675051:-1
position: 675051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685464:-1
position: 685464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:675051-685464:-1:exon

LOC117010196
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010196
product: kallikrein-14-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084480.1
SIO_010081: LOC117010196
subclass of: SO_0000673
so part of: LOC117010196
location: complement(join(675051..675231,677419..677523,677658..677689,679197..679450,682594..682750,685409..685464))
location: region:675051-685464:-1
so has part: feature:685409-685464:-1:exon
so has part: feature:682594-682750:-1:exon
so has part: feature:679197-679450:-1:exon
so has part: feature:677658-677689:-1:exon
so has part: feature:677419-677523:-1:exon
so has part: feature:675051-675231:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:685409-685464:-1:exon

position:685409:-1
position: 685409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:682594-682750:-1:exon

position:682594:-1
position: 682594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682750:-1
position: 682750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:679197-679450:-1:exon

position:679197:-1
position: 679197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679450:-1
position: 679450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:677658-677689:-1:exon

position:677658:-1
position: 677658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:677689:-1
position: 677689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:677419-677523:-1:exon

position:677419:-1
position: 677419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:677523:-1
position: 677523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:675051-675231:-1:exon

position:675231:-1
position: 675231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117010196
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010196
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kallikrein-14-like
translation: MALLLVTGVAGDTRVVGGHACVPHSQPWQVAVLDMYKLYCGGVLIAPRWVVTAAHCTTPGVTTVALGKHRLYAREAGEQRRMVARRVAHPGYDPSTKDNDIMLLKLVAPAAISERVRPIAVASCLPEAGTTCVTSGWGATTSPEVTYPEVLQCVNVTLFSSAECRRFYPDSITANMICAGNVQGGTDSCQGDSGGPLVCRGALQGIVSWGMERCGQPRRPGVYTKVCRYARWIRDTMDDT
SIO_010081: LOC117010196
subclass of: SO_0000673
so part of: LOC117010196
location: complement(join(675079..675231,677419..677523,677658..677689,679197..679450,682594..682750,685409..685430))
location: region:675079-685430:-1
so has part: feature:685409-685430:-1:exon
so has part: feature:682594-682750:-1:exon
so has part: feature:679197-679450:-1:exon
so has part: feature:677658-677689:-1:exon
so has part: feature:677419-677523:-1:exon
so has part: feature:675079-675231:-1:exon

XP_032940371.1
type: Protein
SIO_000068: ncbiprotein

position:675079:-1
position: 675079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685430:-1
position: 685430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:685409-685430:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:682594-682750:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:679197-679450:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:677658-677689:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:677419-677523:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:675079-675231:-1:exon

LOC117010177
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010177
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(696202..>725241)
location: region:696202-725241:-1
so has part: feature:696202-725241:-1:exon
subclass of: SO_0000010

117010177
type: Gene
SIO_000068: ncbigene

position:696202:-1
position: 696202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:725241:-1
position: 725241
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:696202-725241:-1:exon

LOC117010177
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010177
product: histone-lysine N-methyltransferase 2B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033084436.2
SIO_010081: LOC117010177
subclass of: SO_0000673
so part of: LOC117010177
location: complement(join(696202..698065,702645..702774,706288..706371,714319..714429,716492..716675,723013..723087,725163..>725241))
location: region:696202-725241:-1
so has part: feature:725163-725241:-1:exon
so has part: feature:723013-723087:-1:exon
so has part: feature:716492-716675:-1:exon
so has part: feature:714319-714429:-1:exon
so has part: feature:706288-706371:-1:exon
so has part: feature:702645-702774:-1:exon
so has part: feature:696202-698065:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:725163-725241:-1:exon

position:725163:-1
position: 725163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:723013-723087:-1:exon

position:723013:-1
position: 723013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723087:-1
position: 723087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:716492-716675:-1:exon

position:716492:-1
position: 716492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:716675:-1
position: 716675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:714319-714429:-1:exon

position:714319:-1
position: 714319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:714429:-1
position: 714429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:706288-706371:-1:exon

position:706288:-1
position: 706288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:706371:-1
position: 706371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:702645-702774:-1:exon

position:702645:-1
position: 702645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702774:-1
position: 702774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:696202-698065:-1:exon

position:698065:-1
position: 698065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117010177
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010177
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase 2B-like
translation: PSPPLPHLRFEISSEDGLRVTAPSLEGAWRAVLERVQEARASAHLGHLSFAGMSGLRLLGIHHDAVVFLLEQLPGAGSCSRYRFRYHPPRRDPPHTAPPRNPSGCARAELYLRKCTFDMFSFLASQHRALPQGPPPREEEEDEVQLKPTRRATSLELPMAMRFRHLKRTAKEAVGVYRSAIHGRGLFCKRNIEAGEMVIEYSGIVVRSVLTDKREKFYDSKGIGCYMFRIDEAEVVDATMHGSAARFINHSCEPNCYSRVIHVEGHKRIVIFALRRILRGEELTYDYKFPIEEPAAKLPCNCGARRCRRFLN
SIO_010081: LOC117010177
subclass of: SO_0000673
so part of: LOC117010177
location: complement(join(697790..698065,702645..702774,706288..706371,714319..714429,716492..716675,723013..723087,725163..>725241))
location: region:697790-725241:-1
so has part: feature:725163-725241:-1:exon
so has part: feature:723013-723087:-1:exon
so has part: feature:716492-716675:-1:exon
so has part: feature:714319-714429:-1:exon
so has part: feature:706288-706371:-1:exon
so has part: feature:702645-702774:-1:exon
so has part: feature:697790-698065:-1:exon

XP_032940327.1
type: Protein
SIO_000068: ncbiprotein

position:697790:-1
position: 697790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:725163-725241:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:723013-723087:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:716492-716675:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:714319-714429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:706288-706371:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:702645-702774:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:697790-698065:-1:exon

NPHS1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: NPHS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 734505..776407
location: region:734505-776407:1
so has part: feature:734505-776407:1:exon
subclass of: SO_0000010

117010179
type: Gene
SIO_000068: ncbigene

position:734505:1
position: 734505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:776407:1
position: 776407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:734505-776407:1:exon

NPHS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NPHS1
product: NPHS1 adhesion molecule, nephrin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 63% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084437.1
SIO_010081: NPHS1
subclass of: SO_0000673
so part of: NPHS1
location: join(734505..734609,741558..741591,742163..742339,743397..743539,744528..744636,746481..746562,748372..748479,750844..750943,753296..753462,754059..754263,754988..755114,761213..761347,762216..762356,764471..764592,768427..768469,768559..768569,768673..768847,769354..769531,770245..770543,773448..773559,774064..774227,775157..775211,775312..775364,775778..775972,776388..776407)
location: region:734505-776407:1
so has part: feature:734505-734609:1:exon
so has part: feature:741558-741591:1:exon
so has part: feature:742163-742339:1:exon
so has part: feature:743397-743539:1:exon
so has part: feature:744528-744636:1:exon
so has part: feature:746481-746562:1:exon
so has part: feature:748372-748479:1:exon
so has part: feature:750844-750943:1:exon
so has part: feature:753296-753462:1:exon
so has part: feature:754059-754263:1:exon
so has part: feature:754988-755114:1:exon
so has part: feature:761213-761347:1:exon
so has part: feature:762216-762356:1:exon
so has part: feature:764471-764592:1:exon
so has part: feature:768427-768469:1:exon
so has part: feature:768559-768569:1:exon
so has part: feature:768673-768847:1:exon
so has part: feature:769354-769531:1:exon
so has part: feature:770245-770543:1:exon
so has part: feature:773448-773559:1:exon
so has part: feature:774064-774227:1:exon
so has part: feature:775157-775211:1:exon
so has part: feature:775312-775364:1:exon
so has part: feature:775778-775972:1:exon
so has part: feature:776388-776407:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:734505-734609:1:exon

position:734609:1
position: 734609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:741558-741591:1:exon

position:741558:1
position: 741558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741591:1
position: 741591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:742163-742339:1:exon

position:742163:1
position: 742163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:742339:1
position: 742339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:743397-743539:1:exon

position:743397:1
position: 743397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:743539:1
position: 743539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:744528-744636:1:exon

position:744528:1
position: 744528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744636:1
position: 744636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:746481-746562:1:exon

position:746481:1
position: 746481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746562:1
position: 746562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:748372-748479:1:exon

position:748372:1
position: 748372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:748479:1
position: 748479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:750844-750943:1:exon

position:750844:1
position: 750844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:750943:1
position: 750943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:753296-753462:1:exon

position:753296:1
position: 753296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753462:1
position: 753462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:754059-754263:1:exon

position:754059:1
position: 754059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754263:1
position: 754263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:754988-755114:1:exon

position:754988:1
position: 754988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:755114:1
position: 755114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:761213-761347:1:exon

position:761213:1
position: 761213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761347:1
position: 761347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:762216-762356:1:exon

position:762216:1
position: 762216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:762356:1
position: 762356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:764471-764592:1:exon

position:764471:1
position: 764471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:764592:1
position: 764592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:768427-768469:1:exon

position:768427:1
position: 768427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:768469:1
position: 768469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:768559-768569:1:exon

position:768559:1
position: 768559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:768569:1
position: 768569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:768673-768847:1:exon

position:768673:1
position: 768673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:768847:1
position: 768847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:769354-769531:1:exon

position:769354:1
position: 769354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:769531:1
position: 769531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:770245-770543:1:exon

position:770245:1
position: 770245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:770543:1
position: 770543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:773448-773559:1:exon

position:773448:1
position: 773448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:773559:1
position: 773559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:774064-774227:1:exon

position:774064:1
position: 774064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:774227:1
position: 774227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:775157-775211:1:exon

position:775157:1
position: 775157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:775211:1
position: 775211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:775312-775364:1:exon

position:775312:1
position: 775312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:775364:1
position: 775364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:775778-775972:1:exon

position:775778:1
position: 775778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:775972:1
position: 775972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:776388-776407:1:exon

position:776388:1
position: 776388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NPHS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: NPHS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nephrin
translation: MASGDNDNGATTPLGDVIGVTAPGDDGLGSGIDLGAVLALVVIGGNGSPFLEEPANQSVALGEGAELRCRARVGVAVQWAREGLLLGAPPTRAHPRYRLAGDPLKVGVSPRVGVSPGEHHLRIRPVTLEDDAEFQCQAGEGNGTRASRPALLTLELLEGAELPLRGGAELQVRCRARDGRPSPHLELRLGQRLLPDVSWRELEGSHPKLRDGEVTARLTPGPADQGLSLVCSASNAAGAAPAPARLRLDIAGDIRGLPPLVRAGEELELICESRGGRPAPSLHWDKDGRPLVGAWSEHEGGVARTRLVLSPAPEDDGTTLRCSAVTSLPEGGASTSVKLRVTGSYWFILVYTGSYWSDGPSELTLLGSGAVPEDGEAQLSCTSAPSNPPVRLRWWLGGRELQATHQGVVMGGGAVSNLTLRGRVQDHGAPLVCEAETPGVGTKSVTVTVSVSHAPLVSAPSPVVVPEGSEAVLELSVRAHPPPESCQWSVRGRGISPEGSPRFRLSPGGALVIANVTRGDSAPYRAWCHNAEGGAGTDVTLLVQVPPSIVRAPDPVVVAEGGEGRLLCEAEGSPLPPGSVRWGRLGDSGSPLSLPPELGGSPLGDSGSPLALPPELQPLPGGPGGSLRVSGARRHLGGPYECRVESGVPPPARAIVRLVVTYAPEMEAEPQEGAGLGAGPGAVLVPEGAESATLRCRAQGVPGVELSWESNGRGLRLGEPGSPFQERQWREGPWTSSVLSVTNVTRARARLRRLFLQSHQSSQSSQSPRPRYRYRNQPTAPPDWEHWEHWEGGNGTIGVFVCVARNERGSVRRRLQLRLADRPDPPRALRLSGVSGTSLSLEWDPGFDGGLPQHFLLRAEGPDAPPPPAALVTSGFALTLGGLRPDTPYDVTVRARNARGDSAPARLRAVTSAQLRRPPQLRLGLLGAPQGGGASPVRGGGAVGGLRGGAPGAARDPPGGAGLRGEGPRAEPRPQINHAQTSSNQFCPSPSQFVQISSQFLPSLLQILFQSPPILPSLF
SIO_010081: NPHS1
subclass of: SO_0000673
so part of: NPHS1
location: join(734505..734609,741558..741591,742163..742339,743397..743539,744528..744636,746481..746562,748372..748479,750844..750943,753296..753462,754059..754263,754988..755114,761213..761347,762216..762356,764471..764592,768427..768469,768559..768569,768673..768847,769354..769531,770245..770543,773448..773559,774064..774227,775157..775211,775312..775364,775778..775972,776388..776407)
location: region:734505-776407:1
so has part: feature:734505-734609:1:exon
so has part: feature:741558-741591:1:exon
so has part: feature:742163-742339:1:exon
so has part: feature:743397-743539:1:exon
so has part: feature:744528-744636:1:exon
so has part: feature:746481-746562:1:exon
so has part: feature:748372-748479:1:exon
so has part: feature:750844-750943:1:exon
so has part: feature:753296-753462:1:exon
so has part: feature:754059-754263:1:exon
so has part: feature:754988-755114:1:exon
so has part: feature:761213-761347:1:exon
so has part: feature:762216-762356:1:exon
so has part: feature:764471-764592:1:exon
so has part: feature:768427-768469:1:exon
so has part: feature:768559-768569:1:exon
so has part: feature:768673-768847:1:exon
so has part: feature:769354-769531:1:exon
so has part: feature:770245-770543:1:exon
so has part: feature:773448-773559:1:exon
so has part: feature:774064-774227:1:exon
so has part: feature:775157-775211:1:exon
so has part: feature:775312-775364:1:exon
so has part: feature:775778-775972:1:exon
so has part: feature:776388-776407:1:exon

XP_032940328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:734505-734609:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:741558-741591:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:742163-742339:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:743397-743539:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:744528-744636:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:746481-746562:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:748372-748479:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:750844-750943:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:753296-753462:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:754059-754263:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:754988-755114:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:761213-761347:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:762216-762356:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:764471-764592:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:768427-768469:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:768559-768569:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:768673-768847:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:769354-769531:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:770245-770543:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:773448-773559:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:774064-774227:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:775157-775211:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:775312-775364:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:775778-775972:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:776388-776407:1:exon

RBM42
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: RBM42
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(777398..793281)
location: region:777398-793281:-1
so has part: feature:777398-793281:-1:exon
subclass of: SO_0000010

117010180
type: Gene
SIO_000068: ncbigene

position:777398:-1
position: 777398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:793281:-1
position: 793281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:777398-793281:-1:exon

RBM42
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: RBM42
product: RNA binding motif protein 42
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084438.1
SIO_010081: RBM42
subclass of: SO_0000673
so part of: RBM42
location: complement(join(777398..777591,779476..779670,784680..784800,785479..785664,785766..785924,786945..787111,789204..789266,790959..791043,792021..792123,793142..793281))
location: region:777398-793281:-1
so has part: feature:793142-793281:-1:exon
so has part: feature:792021-792123:-1:exon
so has part: feature:790959-791043:-1:exon
so has part: feature:789204-789266:-1:exon
so has part: feature:786945-787111:-1:exon
so has part: feature:785766-785924:-1:exon
so has part: feature:785479-785664:-1:exon
so has part: feature:784680-784800:-1:exon
so has part: feature:779476-779670:-1:exon
so has part: feature:777398-777591:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:793142-793281:-1:exon

position:793142:-1
position: 793142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:792021-792123:-1:exon

position:792021:-1
position: 792021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:792123:-1
position: 792123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:790959-791043:-1:exon

position:790959:-1
position: 790959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:791043:-1
position: 791043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:789204-789266:-1:exon

position:789204:-1
position: 789204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:789266:-1
position: 789266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:786945-787111:-1:exon

position:786945:-1
position: 786945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:787111:-1
position: 787111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:785766-785924:-1:exon

position:785766:-1
position: 785766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:785924:-1
position: 785924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:785479-785664:-1:exon

position:785479:-1
position: 785479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:785664:-1
position: 785664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:784680-784800:-1:exon

position:784680:-1
position: 784680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:784800:-1
position: 784800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:779476-779670:-1:exon

position:779476:-1
position: 779476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:779670:-1
position: 779670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:777398-777591:-1:exon

position:777591:-1
position: 777591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBM42
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: RBM42
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 42
translation: MAAGAGPGPAVVAAGPGPGPGAAAGGGGPAAKSGEERLKEMEAEMALFEQEVLGAPGPAPGDPLAPPPVLRPIIATNTYQQVQQSLEARAAAAATVPPLGTPPVPFVGPVSPQRPPILRPAFVPHVLQRPAVPRPPLALRPPPGAMVGVGPPLGAPPAPPLLLAPPPLQRPPPAPLGTAVGAGLRAAGSGPGSPLPPLPPAAAGPRAPPPGPPPGPPKPTPPVIQAAPTVYPAPPRRVMEETPPPRAPPPEEPRIGPSLPAPPPAMATPPPEPRPGPAHLAPVPRPLRRPRPQDPPFPVPEVGAEPAAEDKRKGRGERLKRCIRTAAGSSWEDPSLLEWDADDFRIFCGDLGNEVNDETLGRAFGRFPSFLKAKVIRDKRSGKTKGYGFVSFKDPNDYVRAMREMNGKYVGSRPIKLRKSQWKDRNLEVVRRKQREKKKLGLR
SIO_010081: RBM42
subclass of: SO_0000673
so part of: RBM42
location: complement(join(777479..777591,779476..779670,784680..784800,785479..785664,785766..785924,786945..787111,789204..789266,790959..791043,792021..792123,793142..793281))
location: region:777479-793281:-1
so has part: feature:793142-793281:-1:exon
so has part: feature:792021-792123:-1:exon
so has part: feature:790959-791043:-1:exon
so has part: feature:789204-789266:-1:exon
so has part: feature:786945-787111:-1:exon
so has part: feature:785766-785924:-1:exon
so has part: feature:785479-785664:-1:exon
so has part: feature:784680-784800:-1:exon
so has part: feature:779476-779670:-1:exon
so has part: feature:777479-777591:-1:exon

XP_032940329.1
type: Protein
SIO_000068: ncbiprotein

position:777479:-1
position: 777479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:793142-793281:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:792021-792123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:790959-791043:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:789204-789266:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:786945-787111:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:785766-785924:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:785479-785664:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:784680-784800:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:779476-779670:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:777479-777591:-1:exon

LOC117010159
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010159
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(793281..795920)
location: region:793281-795920:-1
so has part: feature:793281-795920:-1:exon
subclass of: SO_0000010

117010159
type: Gene
SIO_000068: ncbigene

position:795920:-1
position: 795920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:793281-795920:-1:exon

LOC117010159
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010159
product: transmembrane immune signaling adaptor TYROBP
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033084417.1
SIO_010081: LOC117010159
subclass of: SO_0000673
so part of: LOC117010159
location: complement(join(793281..793616,795023..795139,795225..795245,795684..795920))
location: region:793281-795920:-1
so has part: feature:795684-795920:-1:exon
so has part: feature:795225-795245:-1:exon
so has part: feature:795023-795139:-1:exon
so has part: feature:793281-793616:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:795684-795920:-1:exon

position:795684:-1
position: 795684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:795225-795245:-1:exon

position:795225:-1
position: 795225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:795245:-1
position: 795245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:795023-795139:-1:exon

position:795023:-1
position: 795023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:795139:-1
position: 795139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:793281-793616:-1:exon

position:793616:-1
position: 793616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117010159
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010159
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TYRO protein tyrosine kinase-binding protein
translation: MGGACWEGAWLQQGTPNWEVLGGSHELWEGSRGRPIRRRGQKGAWPEVPHPGHSRCPSPTAAMGPPGTLGLLLLLLGAAAAQQECSGCLPGPGPIAALVVADVIMTLLIGAGAYWLAGRGRRAPSKPRPPEQDSHYQELQGARADLYSELKR
SIO_010081: LOC117010159
subclass of: SO_0000673
so part of: LOC117010159
location: complement(join(793525..793616,795023..795139,795225..795245,795684..795912))
location: region:793525-795912:-1
so has part: feature:795684-795912:-1:exon
so has part: feature:795225-795245:-1:exon
so has part: feature:795023-795139:-1:exon
so has part: feature:793525-793616:-1:exon

XP_032940308.1
type: Protein
SIO_000068: ncbiprotein

position:793525:-1
position: 793525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:795912:-1
position: 795912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:795684-795912:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:795225-795245:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:795023-795139:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:793525-793616:-1:exon

CTU1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: CTU1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 796200..803035
location: region:796200-803035:1
so has part: feature:796200-803035:1:exon
subclass of: SO_0000010

117010181
type: Gene
SIO_000068: ncbigene

position:796200:1
position: 796200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:803035:1
position: 803035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:796200-803035:1:exon

CTU1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CTU1
product: cytosolic thiouridylase subunit 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084439.1
SIO_010081: CTU1
subclass of: SO_0000673
so part of: CTU1
location: join(796200..796273,799577..800078,801607..802908,803031..803035)
location: region:796200-803035:1
so has part: feature:796200-796273:1:exon
so has part: feature:799577-800078:1:exon
so has part: feature:801607-802908:1:exon
so has part: feature:803031-803035:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:796200-796273:1:exon

position:796273:1
position: 796273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:799577-800078:1:exon

position:799577:1
position: 799577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:800078:1
position: 800078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:801607-802908:1:exon

position:801607:1
position: 801607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:802908:1
position: 802908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:803031-803035:1:exon

position:803031:1
position: 803031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CTU1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CTU1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoplasmic tRNA 2-thiolation protein 1
translation: MPPPRCSRCPLPSSLLRSRSLQPFCRRCFLRAFESETLQALRNSGISPQPGHAVAVAASGGKDSTVLAHLLVRLNRERALGLRLALLGVDEGIGGYRDEALAVLRGVGAALPLPLVLVSHRELFGWALDELGPALGGRSRCTVCGVFRRQAMERAAREMGADWIATGHNADDVAETVLMNFLRGDVARLRRAANEASGATNGTGATNEASSATLATNEVTMATNEASSATMATNEVTVATNEASGATNGTGATNEVTVATGATEFLANSTDFLENRTKSNRNPMEWLENSMEPKENSTEPNENSTEPNENPTKLNDDATEPNENPTEPNENLMKLNEKPTKPNENSTKPLENSMKPNKNPTKPNENPMKPNENSTKLNENPMKLNENSTKLLENSTKPNKNSTKPNKNSTKPNENSTKPNENSTKPNENQTKPNKTSTKPNKNPTKPNKNPTEPTKTPTEPNDRPRKAAKPRGSPEPAVPRLKPLRHAAQKEIVLYAHFRGLPYASAECRHAPLAFRGHPRALLKDLEASRPAAVAALAHSGRRLALGAAPGAGAAPGACGRCGAVASGELCMACVLLAALDKGRPKLALGKRGLRVATEG
SIO_010081: CTU1
subclass of: SO_0000673
so part of: CTU1
location: join(799580..800078,801607..802908,803031..803035)
location: region:799580-803035:1
so has part: feature:799580-800078:1:exon
so has part: feature:801607-802908:1:exon
so has part: feature:803031-803035:1:exon

XP_032940330.1
type: Protein
SIO_000068: ncbiprotein

position:799580:1
position: 799580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:799580-800078:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:801607-802908:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:803031-803035:1:exon

LOC117010182
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010182
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(803039..803795)
location: region:803039-803795:-1
so has part: feature:803039-803795:-1:exon
subclass of: SO_0000010

117010182
type: Gene
SIO_000068: ncbigene

position:803039:-1
position: 803039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:803795:-1
position: 803795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:803039-803795:-1:exon

LOC117010182
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010182
product: calphotin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 66% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084441.2
SIO_010081: LOC117010182
subclass of: SO_0000673
so part of: LOC117010182
location: complement(join(803039..803044,803103..803409,803443..803795))
location: region:803039-803795:-1
so has part: feature:803443-803795:-1:exon
so has part: feature:803103-803409:-1:exon
so has part: feature:803039-803044:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:803443-803795:-1:exon

position:803443:-1
position: 803443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:803103-803409:-1:exon

position:803103:-1
position: 803103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:803409:-1
position: 803409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:803039-803044:-1:exon

position:803044:-1
position: 803044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117010182
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010182
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calphotin-like
translation: MSQGPIEMSPNVPRATPNVPSEVPDVPKATPGVPQAPPAVAEAPQAAPLGASGPAQQLHLHRPRPGATGATNTRAQLVTRATHTLLLMVTRATRPHLTTRIVTPVATTDPAATAPVATSPILVATTLFVSSGPKATTLSVLTLVATDPLTTSPVATKLILVATNPSTTTLNVPALVAINPLTIPPVATTPLTTTPLVTGPLTATFTVATNPILAATKPILP
SIO_010081: LOC117010182
subclass of: SO_0000673
so part of: LOC117010182
location: complement(join(803039..803044,803103..803409,803443..803795))
location: region:803039-803795:-1
so has part: feature:803443-803795:-1:exon
so has part: feature:803103-803409:-1:exon
so has part: feature:803039-803044:-1:exon

XP_032940332.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:803443-803795:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:803103-803409:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:803039-803044:-1:exon

LOC117010211
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010211
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 804766..821277
location: region:804766-821277:1
so has part: feature:804766-821277:1:exon
subclass of: SO_0000010

117010211
type: Gene
SIO_000068: ncbigene

position:804766:1
position: 804766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:821277:1
position: 821277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:804766-821277:1:exon

LOC117010211
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010211
product: synaptophysin-like protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_033084505.1
SIO_010081: LOC117010211
subclass of: SO_0000673
so part of: LOC117010211
location: join(804766..804865,806696..806814,808886..809096,811112..811119,818165..818341,819727..821277)
location: region:804766-821277:1
so has part: feature:804766-804865:1:exon
so has part: feature:806696-806814:1:exon
so has part: feature:808886-809096:1:exon
so has part: feature:811112-811119:1:exon
so has part: feature:818165-818341:1:exon
so has part: feature:819727-821277:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:804766-804865:1:exon

position:804865:1
position: 804865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:806696-806814:1:exon

position:806696:1
position: 806696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806814:1
position: 806814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:808886-809096:1:exon

position:808886:1
position: 808886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:809096:1
position: 809096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:811112-811119:1:exon

position:811112:1
position: 811112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:811119:1
position: 811119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:818165-818341:1:exon

position:818165:1
position: 818165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:818341:1
position: 818341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:819727-821277:1:exon

position:819727:1
position: 819727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117010211
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010211
product: synaptophysin-like protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_033084506.1
SIO_010081: LOC117010211
subclass of: SO_0000673
so part of: LOC117010211
location: join(804766..804865,806696..806814,808886..809068,809291..809318,811112..811119,818165..818341,819727..821277)
location: region:804766-821277:1
so has part: feature:804766-804865:1:exon
so has part: feature:806696-806814:1:exon
so has part: feature:808886-809068:1:exon
so has part: feature:809291-809318:1:exon
so has part: feature:811112-811119:1:exon
so has part: feature:818165-818341:1:exon
so has part: feature:819727-821277:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:804766-804865:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:806696-806814:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:808886-809068:1:exon

position:809068:1
position: 809068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:809291-809318:1:exon

position:809291:1
position: 809291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:809318:1
position: 809318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:811112-811119:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:818165-818341:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:819727-821277:1:exon

LOC117010211
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010211
product: synaptophysin-like protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033084507.1
SIO_010081: LOC117010211
subclass of: SO_0000673
so part of: LOC117010211
location: join(804766..804865,806696..806814,808886..809096,818165..818341,819727..819855)
location: region:804766-819855:1
so has part: feature:804766-804865:1:exon
so has part: feature:806696-806814:1:exon
so has part: feature:808886-809096:1:exon
so has part: feature:818165-818341:1:exon
so has part: feature:819727-819855:1:exon

position:819855:1
position: 819855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:804766-804865:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:806696-806814:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:808886-809096:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:818165-818341:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:819727-819855:1:exon

LOC117010211
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010211
product: synaptophysin-like protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_033084508.1
SIO_010081: LOC117010211
subclass of: SO_0000673
so part of: LOC117010211
location: join(804766..804865,806696..806814,808886..809068,809291..809318,818165..818341,819727..819855)
location: region:804766-819855:1
so has part: feature:804766-804865:1:exon
so has part: feature:806696-806814:1:exon
so has part: feature:808886-809068:1:exon
so has part: feature:809291-809318:1:exon
so has part: feature:818165-818341:1:exon
so has part: feature:819727-819855:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:804766-804865:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:806696-806814:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:808886-809068:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:809291-809318:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:818165-818341:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:819727-819855:1:exon

LOC117010211
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010211
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptophysin-like protein 1 isoform X1
translation: MAAPRFSLGPLKEPLGLIRALQWFFSIFAFATCGGFEGSVTFRVTCEGRENHTVSAHFGYPFRLHQAVFQPSLTHLCNHTWPKDVHLIGDFSSAARFFVAVGVASFLYSLGALGGYLGYLHLYRCAGSRLPLMDPRTWCSRAWWPPCGSWPARPGPRPWDTSGRPRPRPSPTAPPPPRCAPTAGPRPWGGWGPPWPSDSSTWCSGPAAPGSSTRRPRCTARPRPPTPPPPPCDPSPHPSWRILPLFFLGRIWGRG
SIO_010081: LOC117010211
subclass of: SO_0000673
so part of: LOC117010211
location: join(804797..804865,806696..806814,808886..809096,811112..811119,818165..818341,819727..819910)
location: region:804797-819910:1
so has part: feature:804797-804865:1:exon
so has part: feature:806696-806814:1:exon
so has part: feature:808886-809096:1:exon
so has part: feature:811112-811119:1:exon
so has part: feature:818165-818341:1:exon
so has part: feature:819727-819910:1:exon

XP_032940396.1
type: Protein
SIO_000068: ncbiprotein

position:804797:1
position: 804797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:819910:1
position: 819910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:804797-804865:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:806696-806814:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:808886-809096:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:811112-811119:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:818165-818341:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:819727-819910:1:exon

LOC117010211
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010211
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptophysin-like protein 1 isoform X2
translation: MAAPRFSLGPLKEPLGLIRALQWFFSIFAFATCGGFEGSVTFRVTCEGRENHTVSAHFGYPFRLHQAVFQPSLTHLCNHTWPKDVHLIGDFSSAARFFVAVGVASFLYSLGALGGYLGYLHLYRCAGSRLPLMDPRTWCSRAWWPPCGSWPARPGPRPWDTSGRPRPRPSPTAPPPPRCAPTAGPRPWGGWGPPWPSDSSTWCSGPAAPGSSTRRPRCTARPRPPTPPPPPCDPSPHPSWRILPLFFLGRIWGRG
SIO_010081: LOC117010211
subclass of: SO_0000673
so part of: LOC117010211
location: join(804797..804865,806696..806814,808886..809068,809291..809318,811112..811119,818165..818341,819727..819910)
location: region:804797-819910:1
so has part: feature:804797-804865:1:exon
so has part: feature:806696-806814:1:exon
so has part: feature:808886-809068:1:exon
so has part: feature:809291-809318:1:exon
so has part: feature:811112-811119:1:exon
so has part: feature:818165-818341:1:exon
so has part: feature:819727-819910:1:exon

XP_032940397.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:804797-804865:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:806696-806814:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:808886-809068:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:809291-809318:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:811112-811119:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:818165-818341:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:819727-819910:1:exon

LOC117010211
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010211
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptophysin-like protein 1 isoform X3
translation: MAAPRFSLGPLKEPLGLIRALQWFFSIFAFATCGGFEGSVTFRVTCEGRENHTVSAHFGYPFRLHQAVFQPSLTHLCNHTWPKDVHLIGDFSSAARFFVAVGVASFLYSLGALGGYLGYLHLYRCAGSRLPLMDLVFSGLVAALWLVASSAWAQALGHVRAAAAAPLPHCPSPTAVCAHGGTTPMGGLGASVAFGFLNLVLWAGGSWFVYKETPLHRPAPPPDSAPSPM
SIO_010081: LOC117010211
subclass of: SO_0000673
so part of: LOC117010211
location: join(804797..804865,806696..806814,808886..809096,818165..818341,819727..819840)
location: region:804797-819840:1
so has part: feature:804797-804865:1:exon
so has part: feature:806696-806814:1:exon
so has part: feature:808886-809096:1:exon
so has part: feature:818165-818341:1:exon
so has part: feature:819727-819840:1:exon

XP_032940398.1
type: Protein
SIO_000068: ncbiprotein

position:819840:1
position: 819840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:804797-804865:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:806696-806814:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:808886-809096:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:818165-818341:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:819727-819840:1:exon

LOC117010211
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010211
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptophysin-like protein 1 isoform X4
translation: MAAPRFSLGPLKEPLGLIRALQWFFSIFAFATCGGFEGSVTFRVTCEGRENHTVSAHFGYPFRLHQAVFQPSLTHLCNHTWPKDVHLIGDFSSAARFFVAVGVASFLYSLGALGGYLGYLHLYRCAGSRLPLMDLVFSGLVAALWLVASSAWAQALGHVRAAAAAPLPHCPSPTAVCAHGGTTPMGGLGASVAFGFLNLVLWAGGSWFVYKETPLHRPAPPPDSAPSPM
SIO_010081: LOC117010211
subclass of: SO_0000673
so part of: LOC117010211
location: join(804797..804865,806696..806814,808886..809068,809291..809318,818165..818341,819727..819840)
location: region:804797-819840:1
so has part: feature:804797-804865:1:exon
so has part: feature:806696-806814:1:exon
so has part: feature:808886-809068:1:exon
so has part: feature:809291-809318:1:exon
so has part: feature:818165-818341:1:exon
so has part: feature:819727-819840:1:exon

XP_032940399.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:804797-804865:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:806696-806814:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:808886-809068:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:809291-809318:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:818165-818341:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:819727-819840:1:exon

LOC117010200
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010200
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(824913..850184)
location: region:824913-850184:-1
so has part: feature:824913-850184:-1:exon
subclass of: SO_0000010

117010200
type: Gene
SIO_000068: ncbigene

position:824913:-1
position: 824913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850184:-1
position: 850184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:824913-850184:-1:exon

LOC117010200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010200
product: kallikrein-14-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 66% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084492.1
SIO_010081: LOC117010200
subclass of: SO_0000673
so part of: LOC117010200
location: complement(join(824913..825065,825985..826121,839807..840111,841358..841505,845023..845075,850086..850184))
location: region:824913-850184:-1
so has part: feature:850086-850184:-1:exon
so has part: feature:845023-845075:-1:exon
so has part: feature:841358-841505:-1:exon
so has part: feature:839807-840111:-1:exon
so has part: feature:825985-826121:-1:exon
so has part: feature:824913-825065:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:850086-850184:-1:exon

position:850086:-1
position: 850086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:845023-845075:-1:exon

position:845023:-1
position: 845023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845075:-1
position: 845075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:841358-841505:-1:exon

position:841358:-1
position: 841358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:841505:-1
position: 841505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:839807-840111:-1:exon

position:839807:-1
position: 839807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:840111:-1
position: 840111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:825985-826121:-1:exon

position:825985:-1
position: 825985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:826121:-1
position: 826121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:824913-825065:-1:exon

position:825065:-1
position: 825065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117010200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010200
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kallikrein-14-like
translation: MRLRLLLLLLLQAAGARVPRWVLEGHTCAPPWQAALFQGRRFVCGGTLVAPRWVLTAAHCHAPGPITVRLGGRGRHQVRPGEPPLDAAPPGEASPAPGEQRRRSERSFRFPGYNESSKDGDLMLLRLRAPAHLSAQVRPLPLARTCAAPGTACQISGWGSTTSPEVTLPSRLICAYVQLLSEAACRRAYPQRITPSMLCAGVSDRRVDSCQGDSGGPLSCNGTLQGVVSWGLQTCALPGHPGVYTKVCRFTDWIQSVINSN
SIO_010081: LOC117010200
subclass of: SO_0000673
so part of: LOC117010200
location: complement(join(824913..825065,825985..826121,839807..840111,841358..841505,845023..845065))
location: region:824913-845065:-1
so has part: feature:845023-845065:-1:exon
so has part: feature:841358-841505:-1:exon
so has part: feature:839807-840111:-1:exon
so has part: feature:825985-826121:-1:exon
so has part: feature:824913-825065:-1:exon

XP_032940383.1
type: Protein
SIO_000068: ncbiprotein

position:845065:-1
position: 845065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:845023-845065:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:841358-841505:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:839807-840111:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:825985-826121:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:824913-825065:-1:exon

LOC117010191
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010191
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(853256..868896)
location: region:853256-868896:-1
so has part: feature:853256-868896:-1:exon
subclass of: SO_0000010

117010191
type: Gene
SIO_000068: ncbigene

position:853256:-1
position: 853256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:868896:-1
position: 868896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:853256-868896:-1:exon

LOC117010191
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010191
product: rRNA 2'-O-methyltransferase fibrillarin-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084472.1
SIO_010081: LOC117010191
subclass of: SO_0000673
so part of: LOC117010191
location: complement(join(853256..853452,854553..854698,857050..857162,861366..861498,863325..863495,864469..864563,866637..866819,868053..868094,868838..868896))
location: region:853256-868896:-1
so has part: feature:868838-868896:-1:exon
so has part: feature:868053-868094:-1:exon
so has part: feature:866637-866819:-1:exon
so has part: feature:864469-864563:-1:exon
so has part: feature:863325-863495:-1:exon
so has part: feature:861366-861498:-1:exon
so has part: feature:857050-857162:-1:exon
so has part: feature:854553-854698:-1:exon
so has part: feature:853256-853452:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:868838-868896:-1:exon

position:868838:-1
position: 868838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:868053-868094:-1:exon

position:868053:-1
position: 868053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:868094:-1
position: 868094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:866637-866819:-1:exon

position:866637:-1
position: 866637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:866819:-1
position: 866819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:864469-864563:-1:exon

position:864469:-1
position: 864469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864563:-1
position: 864563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:863325-863495:-1:exon

position:863325:-1
position: 863325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:863495:-1
position: 863495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:861366-861498:-1:exon

position:861366:-1
position: 861366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:861498:-1
position: 861498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:857050-857162:-1:exon

position:857050:-1
position: 857050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:857162:-1
position: 857162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:854553-854698:-1:exon

position:854553:-1
position: 854553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:854698:-1
position: 854698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:853256-853452:-1:exon

position:853452:-1
position: 853452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117010191
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010191
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rRNA 2'-O-methyltransferase fibrillarin-like
translation: MRPGFSPRGGRGGFRGRGSPFPPRGGGGARGGGGARGGGGARGGPRGGGRGRGGGARGGARAGFKGGKKVTVEPHRHEGVFICRGREDALVTRNLVPGESVYGEKRISVEDGDTSVEYRAWNPFRSKLAAAILGGIDQIHIRPGAKVLYLGAASGTTVSHVSDIVGQDGVVYAVEFSHRSGRDLLNVAKKRTNVVPVIEDARHPHKYRMLIGMVDVIFADVAQPDQTRIVALNAHHFLRCGGHFLISIKANCIDSTAPAEAVFAGEVKKMTAERMKPQEQLTLEPYERDHAVVVGVYRPPPKEK
SIO_010081: LOC117010191
subclass of: SO_0000673
so part of: LOC117010191
location: complement(join(853431..853452,854553..854698,857050..857162,861366..861498,863325..863495,864469..864563,866637..866819,868053..868094,868838..868847))
location: region:853431-868847:-1
so has part: feature:868838-868847:-1:exon
so has part: feature:868053-868094:-1:exon
so has part: feature:866637-866819:-1:exon
so has part: feature:864469-864563:-1:exon
so has part: feature:863325-863495:-1:exon
so has part: feature:861366-861498:-1:exon
so has part: feature:857050-857162:-1:exon
so has part: feature:854553-854698:-1:exon
so has part: feature:853431-853452:-1:exon

XP_032940363.1
type: Protein
SIO_000068: ncbiprotein

position:853431:-1
position: 853431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:868847:-1
position: 868847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:868838-868847:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:868053-868094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:866637-866819:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:864469-864563:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:863325-863495:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:861366-861498:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:857050-857162:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:854553-854698:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:853431-853452:-1:exon

LOC117010198
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117010198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 869227..874047
location: region:869227-874047:1
so has part: feature:869227-874047:1:exon
subclass of: SO_0000010

117010198
type: Gene
SIO_000068: ncbigene

position:869227:1
position: 869227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874047:1
position: 874047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:869227-874047:1:exon

LOC117010198
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010198
product: cytochrome c oxidase subunit 6B1-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084491.1
SIO_010081: LOC117010198
subclass of: SO_0000673
so part of: LOC117010198
location: join(869227..869329,871146..871262,871973..872016,872541..872597,873830..874047)
location: region:869227-874047:1
so has part: feature:869227-869329:1:exon
so has part: feature:871146-871262:1:exon
so has part: feature:871973-872016:1:exon
so has part: feature:872541-872597:1:exon
so has part: feature:873830-874047:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:869227-869329:1:exon

position:869329:1
position: 869329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:871146-871262:1:exon

position:871146:1
position: 871146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:871262:1
position: 871262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:871973-872016:1:exon

position:871973:1
position: 871973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:872016:1
position: 872016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:872541-872597:1:exon

position:872541:1
position: 872541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:872597:1
position: 872597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:873830-874047:1:exon

position:873830:1
position: 873830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117010198
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117010198
product: cytochrome c oxidase subunit 6B1-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084490.1
SIO_010081: LOC117010198
subclass of: SO_0000673
so part of: LOC117010198
location: join(869227..869329,871146..871262,872497..872597,873830..874047)
location: region:869227-874047:1
so has part: feature:869227-869329:1:exon
so has part: feature:871146-871262:1:exon
so has part: feature:872497-872597:1:exon
so has part: feature:873830-874047:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:869227-869329:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:871146-871262:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:872497-872597:1:exon

position:872497:1
position: 872497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:873830-874047:1:exon

LOC117010198
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome c oxidase subunit 6B1-like isoform X2
translation: MAEDIKAKLGRYKTAPFDSRFPNQNQTRNCWQNYLDFQRCQRSLSSRGADVTPCQWYFRVYKSLCPTSWVTAWDEAREEGTFPGKI
SIO_010081: LOC117010198
subclass of: SO_0000673
so part of: LOC117010198
location: join(871157..871262,871973..872016,872541..872597,873830..873883)
location: region:871157-873883:1
so has part: feature:871157-871262:1:exon
so has part: feature:871973-872016:1:exon
so has part: feature:872541-872597:1:exon
so has part: feature:873830-873883:1:exon

XP_032940382.1
type: Protein
SIO_000068: ncbiprotein

position:871157:1
position: 871157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873883:1
position: 873883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:871157-871262:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:871973-872016:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:872541-872597:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:873830-873883:1:exon

LOC117010198
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117010198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome c oxidase subunit 6B1-like isoform X1
translation: MAEDIKAKLGRYKTAPFDSRFPNQNQTRNCWQNYLDFQRCQRSLSSRGADVTPCQWYFRVYKSLCPTSWVTAWDEAREEGTFPGKI
SIO_010081: LOC117010198
subclass of: SO_0000673
so part of: LOC117010198
location: join(871157..871262,872497..872597,873830..873883)
location: region:871157-873883:1
so has part: feature:871157-871262:1:exon
so has part: feature:872497-872597:1:exon
so has part: feature:873830-873883:1:exon

XP_032940381.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:871157-871262:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:872497-872597:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:873830-873883:1:exon