Catharus ustulatus isolate bCatUst1 chromosome 37, bCatUst1.pri.v2, whole genome shotgun sequence.
type: Entry
definition: Catharus ustulatus isolate bCatUst1 chromosome 37, bCatUst1.pri.v2, whole genome shotgun sequence.
sequence version: NC_046257.1
sequence date: 2021-07-28
sequence: sequence
division: CON
label: NC_046257.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA613294
dblink: SAMN12618602
keyword: WGS
keyword: RefSeq
source: Catharus ustulatus (Swainson's thrush)
organism: Catharus ustulatus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Turdidae; Catharus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020372.1.\nAssembly name: bCatUst1.pri.v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/12/22. The original whole-genome shotgun project has the\naccession WNMQ00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 06-AUG-2020\nAssembly Method :: FALCON v. DX 1.9.0; FALCON-Unzip v.\n 6.0.0.47841; purge_dups github v.\n purge_haplotig (bitbucket v1.0.3+\n 1.Nov.2018); Scaff10x v. 2; Bionano Solve\n v. 3.2.1_04122018; Salsa2 HiC v. 2.2;\n Arrow polishing and gap filling v.\n Smrtlink_6.0.0.47841; Longranger Align v.\n 2.2.2; freebayes v. 1.3.1; gEVAL manual\n curation v. 2020-08-06; VGP assembly\n pipeline v. 1.5\nAssembly Name :: bCatUst1.pri.v2\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 60.58x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Catharus ustulatus Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 1317711
topology: linear
so has quality: SO_0000987
location: 1..1317711
location: region:1-1317711:1
RO_0002162: 91951

NC_046257
type: RefSeq
SIO_000068: refseq

PRJNA613294
type: BioProject
SIO_000068: bioproject

SAMN12618602
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1317711:1
position: 1317711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-1317711:1:source
so part of: sequence
organism: Catharus ustulatus
mol type: genomic DNA
isolate: bCatUst1
chromosome: 37
sex: female
tissue type: blood
dev stage: adult
country: Canada: Kamloops
lat lon: 50.67613 N 120.33787 W
collection date: 15-Jul-2018
collected by: Kira Delmore

91951
type: Taxonomy
SIO_000068: taxonomy

LOC117009886
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009886
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8127..14347)
location: region:8127-14347:-1
so has part: feature:8127-14347:-1:exon
subclass of: SO_0000010

117009886
type: Gene
SIO_000068: ncbigene

position:8127:-1
position: 8127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14347:-1
position: 14347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8127-14347:-1:exon

LOC117009886
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009886
product: galactose-3-O-sulfotransferase 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033084239.1
SIO_010081: LOC117009886
subclass of: SO_0000673
so part of: LOC117009886
location: complement(join(8127..8939,10390..10636,14229..14347))
location: region:8127-14347:-1
so has part: feature:14229-14347:-1:exon
so has part: feature:10390-10636:-1:exon
so has part: feature:8127-8939:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14229-14347:-1:exon

position:14229:-1
position: 14229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10390-10636:-1:exon

position:10390:-1
position: 10390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10636:-1
position: 10636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8127-8939:-1:exon

position:8939:-1
position: 8939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009886
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009886
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: galactose-3-O-sulfotransferase 4-like
translation: MKLPLPPPGCRRLSPLGVALGVFVTLGFTLGLLGGPFRRSPTSAPPCRPRSHVVFLKTHKTGGSSLVNLLSRYGESRRLRFALPHRYQFGYPAPFRAERVRGFGPGARFDILCHHMRFHLAEVQRVMPNDSFYFSIVRDPGTLGESAFSYFRAAAPAFRNSPSLDAFLASPSRFFRPGIRGNHYARNLQWFDFGLPEPTNPEEIPKILARLERVFPLVLLAESFDESLVLLRHRLCWPRDSVDLFPHNSRGSHQVSPAQIQRLRAWNSLDWALYSHFNRTFWRQAEEFGLERLSREVAEIRRRRRFLAGKCLRGGGPVPAQAIPDGNLRPFQPPGGGKILGFALKEGLGEEERELCGRLAMPELPYKDLLERRQFGAQNGTAG
SIO_010081: LOC117009886
subclass of: SO_0000673
so part of: LOC117009886
location: complement(join(8154..8939,10390..10636,14229..14347))
location: region:8154-14347:-1
so has part: feature:14229-14347:-1:exon
so has part: feature:10390-10636:-1:exon
so has part: feature:8154-8939:-1:exon

XP_032940130.1
type: Protein
SIO_000068: ncbiprotein

position:8154:-1
position: 8154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14229-14347:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10390-10636:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8154-8939:-1:exon

LOC117009887
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009887
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 19481..90863
location: region:19481-90863:1
so has part: feature:19481-90863:1:exon
subclass of: SO_0000010

117009887
type: Gene
SIO_000068: ncbigene

position:19481:1
position: 19481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90863:1
position: 90863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19481-90863:1:exon

LOC117009887
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009887
product: cohesin subunit SA-3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084240.1
SIO_010081: LOC117009887
subclass of: SO_0000673
so part of: LOC117009887
location: join(19481..19567,21812..21908,25320..25396,28632..28836,32960..33111,35324..35397,40474..40597,41007..41105,43865..43944,46760..46867,54081..54168,56734..56833,60196..60299,61199..61288,64583..64672,65971..66174,67023..67093,67691..67778,68883..68963,70756..70839,73700..73835,74839..74911,75021..75033,75750..75872,77967..78068,79918..79990,80818..80929,82810..82902,85872..86012,88814..88974,90040..90138,90833..90863)
location: region:19481-90863:1
so has part: feature:19481-19567:1:exon
so has part: feature:21812-21908:1:exon
so has part: feature:25320-25396:1:exon
so has part: feature:28632-28836:1:exon
so has part: feature:32960-33111:1:exon
so has part: feature:35324-35397:1:exon
so has part: feature:40474-40597:1:exon
so has part: feature:41007-41105:1:exon
so has part: feature:43865-43944:1:exon
so has part: feature:46760-46867:1:exon
so has part: feature:54081-54168:1:exon
so has part: feature:56734-56833:1:exon
so has part: feature:60196-60299:1:exon
so has part: feature:61199-61288:1:exon
so has part: feature:64583-64672:1:exon
so has part: feature:65971-66174:1:exon
so has part: feature:67023-67093:1:exon
so has part: feature:67691-67778:1:exon
so has part: feature:68883-68963:1:exon
so has part: feature:70756-70839:1:exon
so has part: feature:73700-73835:1:exon
so has part: feature:74839-74911:1:exon
so has part: feature:75021-75033:1:exon
so has part: feature:75750-75872:1:exon
so has part: feature:77967-78068:1:exon
so has part: feature:79918-79990:1:exon
so has part: feature:80818-80929:1:exon
so has part: feature:82810-82902:1:exon
so has part: feature:85872-86012:1:exon
so has part: feature:88814-88974:1:exon
so has part: feature:90040-90138:1:exon
so has part: feature:90833-90863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19481-19567:1:exon

position:19567:1
position: 19567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:21812-21908:1:exon

position:21812:1
position: 21812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21908:1
position: 21908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:25320-25396:1:exon

position:25320:1
position: 25320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25396:1
position: 25396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:28632-28836:1:exon

position:28632:1
position: 28632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28836:1
position: 28836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:32960-33111:1:exon

position:32960:1
position: 32960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33111:1
position: 33111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:35324-35397:1:exon

position:35324:1
position: 35324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35397:1
position: 35397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:40474-40597:1:exon

position:40474:1
position: 40474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40597:1
position: 40597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:41007-41105:1:exon

position:41007:1
position: 41007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41105:1
position: 41105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:43865-43944:1:exon

position:43865:1
position: 43865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43944:1
position: 43944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:46760-46867:1:exon

position:46760:1
position: 46760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46867:1
position: 46867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:54081-54168:1:exon

position:54081:1
position: 54081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54168:1
position: 54168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:56734-56833:1:exon

position:56734:1
position: 56734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56833:1
position: 56833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:60196-60299:1:exon

position:60196:1
position: 60196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60299:1
position: 60299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:61199-61288:1:exon

position:61199:1
position: 61199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61288:1
position: 61288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:64583-64672:1:exon

position:64583:1
position: 64583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64672:1
position: 64672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:65971-66174:1:exon

position:65971:1
position: 65971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66174:1
position: 66174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:67023-67093:1:exon

position:67023:1
position: 67023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67093:1
position: 67093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:67691-67778:1:exon

position:67691:1
position: 67691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67778:1
position: 67778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:68883-68963:1:exon

position:68883:1
position: 68883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68963:1
position: 68963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:70756-70839:1:exon

position:70756:1
position: 70756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70839:1
position: 70839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:73700-73835:1:exon

position:73700:1
position: 73700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73835:1
position: 73835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:74839-74911:1:exon

position:74839:1
position: 74839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74911:1
position: 74911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:75021-75033:1:exon

position:75021:1
position: 75021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75033:1
position: 75033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:75750-75872:1:exon

position:75750:1
position: 75750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75872:1
position: 75872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:77967-78068:1:exon

position:77967:1
position: 77967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78068:1
position: 78068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:79918-79990:1:exon

position:79918:1
position: 79918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79990:1
position: 79990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:80818-80929:1:exon

position:80818:1
position: 80818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80929:1
position: 80929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:82810-82902:1:exon

position:82810:1
position: 82810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82902:1
position: 82902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:85872-86012:1:exon

position:85872:1
position: 85872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86012:1
position: 86012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:88814-88974:1:exon

position:88814:1
position: 88814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88974:1
position: 88974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:90040-90138:1:exon

position:90040:1
position: 90040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90138:1
position: 90138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:90833-90863:1:exon

position:90833:1
position: 90833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117009887
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009887
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cohesin subunit SA-3-like
translation: METVVDEWLEWYRREREAAFVELLNFSVRACGCQGVVTPEMFRELQNSEIIRRLTENFQEDSPLYPLSQRSQPWRRFCSGFCELLAVLVRRGQHRELRDGFLMDSWIAFLTGLADSQVRAFRHTGTLAALKLLSSLVEVALGVQQQQDNSQRQFEAEKGKDPGRRGTEKLELLQEQRRELREQQQELELLMNGIFKGVFVHRYRDVVPEIRGICMEELGLWVRKFPGSFLTDGHLKYLGWTLHDKHREVRLRCVRALRGIYGIAEMAPSLELFTHRFKPRLVAMAHDEEPEVALEVLRLLRDMDRNMEEVLSDEDCQNIFPVVFVSNRALATAAGEFLFQRLLEPESPGPGPGANRGFFLRLLRFFLGSQLHEHGAYLVDSLWDCAGSRLRDWDTATGMLLGTSLELPQEQALVEILSAAGIRVCRGLPPVGRSLGRKVSSRERREQQEEKSRLSRSLIPVLPQLLEKFSAEPEAVAALLELLGQLELGTVRSARMDKCLEQVLQQIQDLFHKHSRPSPVLSAASRALRALCDPELSLHGLGDIARGRLGDALGDRCHLQVTELLQAASPDEEDVYGLAATLRRLWALFSDHDLTPWALFGPLSQLLRRALDTGEVPAEVTVPAISCIFFHLFWELSRIPESETLPPELHSRISSFLSLCQSCLSEPDPGVRERAFLVLSDLLVLLGPRQLPEPALQAQLGVALEDLVFQEREQEHEGDEAAEWELQELQRRRALLAGFCRLLLIPKIAEWELQELQRRRALLAGFCRLLLQGLLEPRAGADVFKRYCKFYGDFGDIIRETLRGTRSRDRAEWARTVLLSLQQLFTELLLQEGPALRGLPEFGEIWDSLRGLPEFGEIRDLGRRLALFFSLQHPRGRQELLQLHREKREFEEIWELALFFSLQHPRGRQELLQLHSQGIQFSLQPPPEPQIPGIPGGLPLNLPFLEVLSEFSPRLPRPDRSIVLSLLERSCRERGLGPDFGADLGDFGAPLLCYRRSLSAPETPPGPPRAKRPRSSAPPAPAPGPPTPI
SIO_010081: LOC117009887
subclass of: SO_0000673
so part of: LOC117009887
location: join(19562..19567,21812..21908,25320..25396,28632..28836,32960..33111,35324..35397,40474..40597,41007..41105,43865..43944,46760..46867,54081..54168,56734..56833,60196..60299,61199..61288,64583..64672,65971..66174,67023..67093,67691..67778,68883..68963,70756..70839,73700..73835,74839..74911,75021..75033,75750..75872,77967..78068,79918..79990,80818..80929,82810..82902,85872..86012,88814..88974,90040..90080)
location: region:19562-90080:1
so has part: feature:19562-19567:1:exon
so has part: feature:21812-21908:1:exon
so has part: feature:25320-25396:1:exon
so has part: feature:28632-28836:1:exon
so has part: feature:32960-33111:1:exon
so has part: feature:35324-35397:1:exon
so has part: feature:40474-40597:1:exon
so has part: feature:41007-41105:1:exon
so has part: feature:43865-43944:1:exon
so has part: feature:46760-46867:1:exon
so has part: feature:54081-54168:1:exon
so has part: feature:56734-56833:1:exon
so has part: feature:60196-60299:1:exon
so has part: feature:61199-61288:1:exon
so has part: feature:64583-64672:1:exon
so has part: feature:65971-66174:1:exon
so has part: feature:67023-67093:1:exon
so has part: feature:67691-67778:1:exon
so has part: feature:68883-68963:1:exon
so has part: feature:70756-70839:1:exon
so has part: feature:73700-73835:1:exon
so has part: feature:74839-74911:1:exon
so has part: feature:75021-75033:1:exon
so has part: feature:75750-75872:1:exon
so has part: feature:77967-78068:1:exon
so has part: feature:79918-79990:1:exon
so has part: feature:80818-80929:1:exon
so has part: feature:82810-82902:1:exon
so has part: feature:85872-86012:1:exon
so has part: feature:88814-88974:1:exon
so has part: feature:90040-90080:1:exon

XP_032940131.1
type: Protein
SIO_000068: ncbiprotein

position:19562:1
position: 19562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90080:1
position: 90080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19562-19567:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:21812-21908:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:25320-25396:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:28632-28836:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:32960-33111:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:35324-35397:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:40474-40597:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:41007-41105:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:43865-43944:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:46760-46867:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:54081-54168:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:56734-56833:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:60196-60299:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:61199-61288:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:64583-64672:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:65971-66174:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:67023-67093:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:67691-67778:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:68883-68963:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:70756-70839:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:73700-73835:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:74839-74911:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:75021-75033:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:75750-75872:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:77967-78068:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:79918-79990:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:80818-80929:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:82810-82902:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:85872-86012:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:88814-88974:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:90040-90080:1:exon

MOGAT3
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: MOGAT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 94364..105906
location: region:94364-105906:1
so has part: feature:94364-105906:1:exon
subclass of: SO_0000010

117009933
type: Gene
SIO_000068: ncbigene

position:94364:1
position: 94364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105906:1
position: 105906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94364-105906:1:exon

MOGAT3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: MOGAT3
product: monoacylglycerol O-acyltransferase 3, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084294.1
SIO_010081: MOGAT3
subclass of: SO_0000673
so part of: MOGAT3
location: join(94364..94608,96776..96883,97512..97582,99400..99634,101505..101673,103656..103692,103763..103913,105725..105906)
location: region:94364-105906:1
so has part: feature:94364-94608:1:exon
so has part: feature:96776-96883:1:exon
so has part: feature:97512-97582:1:exon
so has part: feature:99400-99634:1:exon
so has part: feature:101505-101673:1:exon
so has part: feature:103656-103692:1:exon
so has part: feature:103763-103913:1:exon
so has part: feature:105725-105906:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:94364-94608:1:exon

position:94608:1
position: 94608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:96776-96883:1:exon

position:96776:1
position: 96776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96883:1
position: 96883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:97512-97582:1:exon

position:97512:1
position: 97512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97582:1
position: 97582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:99400-99634:1:exon

position:99400:1
position: 99400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99634:1
position: 99634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:101505-101673:1:exon

position:101505:1
position: 101505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101673:1
position: 101673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:103656-103692:1:exon

position:103656:1
position: 103656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103692:1
position: 103692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:103763-103913:1:exon

position:103763:1
position: 103763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103913:1
position: 103913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:105725-105906:1:exon

position:105725:1
position: 105725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MOGAT3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: MOGAT3
product: monoacylglycerol O-acyltransferase 3, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084293.1
SIO_010081: MOGAT3
subclass of: SO_0000673
so part of: MOGAT3
location: join(94364..94608,96776..96883,97512..97582,99400..99634,101505..101673,103726..103913,105725..105906)
location: region:94364-105906:1
so has part: feature:94364-94608:1:exon
so has part: feature:96776-96883:1:exon
so has part: feature:97512-97582:1:exon
so has part: feature:99400-99634:1:exon
so has part: feature:101505-101673:1:exon
so has part: feature:103726-103913:1:exon
so has part: feature:105725-105906:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:94364-94608:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:96776-96883:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97512-97582:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99400-99634:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:101505-101673:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:103726-103913:1:exon

position:103726:1
position: 103726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:105725-105906:1:exon

MOGAT3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: MOGAT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 2-acylglycerol O-acyltransferase 3 isoform X2
translation: MAGNFRSALQALCVMQWMMTFLFLGPGSVLLLLLLLRTRLWLIPVTYGGWWLWDWNGPERGARHWDWLRNWRIWDHFCDYFPITVVRECPLPPGRSYLLPCHPHGISCIGAFGAFVSGGRGAAGTPKPNGGNSGPCPGLRPSLAALQGLFRLPLYREYALAAGLCPVSQRCLDAVLSRDSQALLIMVGGAAEALEGTPGCHRVTLSHRRGFVRLALRHGTPLVPVYVFGEQDTFGVPSLAEGSWLRRLQRGLKGILGFAPCIFWGRGGLPLLPFRVPLTVVVGTPLEVPRVARPSEDLVAHYHGLYVRQLRELFERHKVGCGVPPETPLIIV
SIO_010081: MOGAT3
subclass of: SO_0000673
so part of: MOGAT3
location: join(94536..94608,96776..96883,97512..97582,99400..99634,101505..101673,103656..103692,103763..103913,105725..105879)
location: region:94536-105879:1
so has part: feature:94536-94608:1:exon
so has part: feature:96776-96883:1:exon
so has part: feature:97512-97582:1:exon
so has part: feature:99400-99634:1:exon
so has part: feature:101505-101673:1:exon
so has part: feature:103656-103692:1:exon
so has part: feature:103763-103913:1:exon
so has part: feature:105725-105879:1:exon

XP_032940185.1
type: Protein
SIO_000068: ncbiprotein

position:94536:1
position: 94536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105879:1
position: 105879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94536-94608:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:96776-96883:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97512-97582:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99400-99634:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:101505-101673:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:103656-103692:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:103763-103913:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:105725-105879:1:exon

MOGAT3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: MOGAT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 2-acylglycerol O-acyltransferase 3 isoform X1
translation: MAGNFRSALQALCVMQWMMTFLFLGPGSVLLLLLLLRTRLWLIPVTYGGWWLWDWNGPERGARHWDWLRNWRIWDHFCDYFPITVVRECPLPPGRSYLLPCHPHGISCIGAFGAFVSGGRGAAGTPKPNGGNSGPCPGLRPSLAALQGLFRLPLYREYALAAGLCPVSQRCLDAVLSRDSQALLIMVGGAAEALEGTPGCHRVTLSHRRGFVRLALRHGTPLVPVYVFGEQDTFGVPSLAEGSWLRRLQRGLKGILGFAPCIFWGRGGLPLLPFRVPLTVVVGTPLEVPRVARPSEDLVAHYHGLYVRQLRELFERHKVGCGVPPETPLIIV
SIO_010081: MOGAT3
subclass of: SO_0000673
so part of: MOGAT3
location: join(94536..94608,96776..96883,97512..97582,99400..99634,101505..101673,103726..103913,105725..105879)
location: region:94536-105879:1
so has part: feature:94536-94608:1:exon
so has part: feature:96776-96883:1:exon
so has part: feature:97512-97582:1:exon
so has part: feature:99400-99634:1:exon
so has part: feature:101505-101673:1:exon
so has part: feature:103726-103913:1:exon
so has part: feature:105725-105879:1:exon

XP_032940184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94536-94608:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:96776-96883:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97512-97582:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99400-99634:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:101505-101673:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:103726-103913:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:105725-105879:1:exon

TRNAT-AGU
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: TRNAT-AGU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(107346..107419)
location: region:107346-107419:-1
so has part: feature:107346-107419:-1:exon
subclass of: SO_0000663

117009956
type: Gene
SIO_000068: ncbigene

position:107346:-1
position: 107346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107419:-1
position: 107419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107346-107419:-1:exon

TRNAT-AGU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 91951
gene: TRNAT-AGU
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA threonine (anticodon AGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(107383..107385),aa:Thr,seq:agt)
SIO_010081: TRNAT-AGU
subclass of: SO_0000673
so part of: TRNAT-AGU
location: complement(107346..107419)
location: region:107346-107419:-1
so has part: feature:107346-107419:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:107346-107419:-1:exon

AP1S1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: AP1S1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(121809..129855)
location: region:121809-129855:-1
so has part: feature:121809-129855:-1:exon
subclass of: SO_0000010

117009930
type: Gene
SIO_000068: ncbigene

position:121809:-1
position: 121809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129855:-1
position: 129855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121809-129855:-1:exon

AP1S1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: AP1S1
product: adaptor related protein complex 1 subunit sigma 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 24 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033084290.2
SIO_010081: AP1S1
subclass of: SO_0000673
so part of: AP1S1
location: complement(join(121809..121919,123026..123163,125129..125237,128537..128715,129686..129855))
location: region:121809-129855:-1
so has part: feature:129686-129855:-1:exon
so has part: feature:128537-128715:-1:exon
so has part: feature:125129-125237:-1:exon
so has part: feature:123026-123163:-1:exon
so has part: feature:121809-121919:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:129686-129855:-1:exon

position:129686:-1
position: 129686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:128537-128715:-1:exon

position:128537:-1
position: 128537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128715:-1
position: 128715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:125129-125237:-1:exon

position:125129:-1
position: 125129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125237:-1
position: 125237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:123026-123163:-1:exon

position:123026:-1
position: 123026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123163:-1
position: 123163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:121809-121919:-1:exon

position:121919:-1
position: 121919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AP1S1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: AP1S1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit sigma-1A
translation: MMRFMLLFSRQGKLRLQKWYLATADKDKKKMVRELMQVVLARKPKMCSFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFVMGGEIQDTSKKSVLKAIEQADLLQEEDESPRSVLEEMGLA
SIO_010081: AP1S1
subclass of: SO_0000673
so part of: AP1S1
location: complement(join(121872..121919,123026..123163,125129..125237,128537..128715,129686..129688))
location: region:121872-129688:-1
so has part: feature:129686-129688:-1:exon
so has part: feature:128537-128715:-1:exon
so has part: feature:125129-125237:-1:exon
so has part: feature:123026-123163:-1:exon
so has part: feature:121872-121919:-1:exon

XP_032940181.1
type: Protein
SIO_000068: ncbiprotein

position:121872:-1
position: 121872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129688:-1
position: 129688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129686-129688:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:128537-128715:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:125129-125237:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:123026-123163:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:121872-121919:-1:exon

LOC117009888
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 157222..161863
location: region:157222-161863:1
so has part: feature:157222-161863:1:exon
subclass of: SO_0000010

117009888
type: Gene
SIO_000068: ncbigene

position:157222:1
position: 157222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161863:1
position: 161863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157222-161863:1:exon

LOC117009888
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009888
product: mucin-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_033084241.1
SIO_010081: LOC117009888
subclass of: SO_0000673
so part of: LOC117009888
location: join(157222..160105,160232..160420,160778..160893,160992..161050,161306..161454,161561..161617,161694..161863)
location: region:157222-161863:1
so has part: feature:157222-160105:1:exon
so has part: feature:160232-160420:1:exon
so has part: feature:160778-160893:1:exon
so has part: feature:160992-161050:1:exon
so has part: feature:161306-161454:1:exon
so has part: feature:161561-161617:1:exon
so has part: feature:161694-161863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:157222-160105:1:exon

position:160105:1
position: 160105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:160232-160420:1:exon

position:160232:1
position: 160232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160420:1
position: 160420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:160778-160893:1:exon

position:160778:1
position: 160778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160893:1
position: 160893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:160992-161050:1:exon

position:160992:1
position: 160992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161050:1
position: 161050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:161306-161454:1:exon

position:161306:1
position: 161306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161454:1
position: 161454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:161561-161617:1:exon

position:161561:1
position: 161561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161617:1
position: 161617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:161694-161863:1:exon

position:161694:1
position: 161694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117009888
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mucin-2-like
translation: MTTSPTTPTTTSPTTPTTTMITSPTTPTTTSPTTPMTTSPTTPTTTMTTSPTTPTTTTTTSSTTPTTTSPTTPTTTMTTSPTTPTTTSPMTPTTTMTTSPTTPTTTMTTSSTTPTTTSPTTPTTTVTTSPTTPTTTMTTSPTTPTTTSPTTPTTTMTTSPTTPTTTMTTSPTTPTTTMTTSPTTPTTTMTTSPTTPTTTSPTTPTTTMTTSPTTPTTTMTTSPTTPTTTVTTSPTTPTTTMTTSPTTPTTTMTTSPTTPTTTMTTSPTTPTTTMTTSPTTPTTTMTTSPTTPTTPTTTSPTTPTTTMTTSPTTPTTTMTTSPTTPTTTSPTTPTTTMTTSPTTPTTTSPTTPTTTMTTSPTTPTTTMTTSPTTPTTPTTTSPTTPTTTMTTSPTTPTTTSPTTPTTTMTTSPTTPTTTMTTSPTTPTTTSPTTATTTMTTSPTTPTTTMTTSPTTPTTTMTTSPTTPTTTMTTSPTTPTTTMTTSPTTPTTTSPTTPTTTMTTSPTTPTTTMTTSPTTPTTTMTTSPTTPTTTSPTTPTTTMTTSPTTPTTTMTTSPTTPTTTMTTSPTTPTTTMTTSPTTPTTTSPTTPTTTMTTSPTTPTTTMTTSPTTPTTTSPTTPTTTMTTSPTTPTTTSPTTPTTTMTTSPTTPTTTSPTTPTTTMTTSPTTPTTTMTTSPTTPTTTMTTSPTTPTTPTTTSPTTPTTTMTTSPTTPTTTSPTTPTTTMTTSPTTPTTTMTTSPTTPTTTSPTTATTTMTTSPTTPTTTMTTSPTTPTTTMTTSPTTPTTTMTTSPTTPTTTMTTSPTTPTTTSPTTPTTTMTTSPTTPTTTMTTSPTTPTTTMTTSPTTPTTTMTTSPTTPTTTSPTTPTTTMTTSPTTPTTTSPTTPTTTMTTSPTTPTTTSPTTPTTTMTPPTTTTPTSPTTTTTTMTTTTIDPVTTSTPIATTTSTVPTTTVAITTSTDPTNPCLNGGTWENGKCSCVGGFQGDRCQDLVCKNNGTWDNGVCQCTPDFEGPTCEAPKNSVEIKNVTVNTTVEMEAKIDEKFDDNLKDPSSEYYKNFVERFQNQMKKIYGNITGYQGVEIRSLSKGSIVVNYTVIVTVPVTTKVNETMKNISDNLVTALKSQRECDENCTGSNCSFCFNPDATKINVPQVVVNVCQSYIQNDFREFYMDLPTEDGVLCITRCDTRHSDCLKCSSYGSCSLSRAGPYCE
SIO_010081: LOC117009888
subclass of: SO_0000673
so part of: LOC117009888
location: join(157222..160105,160232..160420,160778..160893,160992..161050,161306..161454,161561..161617,161694..161863)
location: region:157222-161863:1
so has part: feature:157222-160105:1:exon
so has part: feature:160232-160420:1:exon
so has part: feature:160778-160893:1:exon
so has part: feature:160992-161050:1:exon
so has part: feature:161306-161454:1:exon
so has part: feature:161561-161617:1:exon
so has part: feature:161694-161863:1:exon

XP_032940132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:157222-160105:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:160232-160420:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:160778-160893:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:160992-161050:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:161306-161454:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:161561-161617:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:161694-161863:1:exon

ACHE
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: ACHE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 244239..252881
location: region:244239-252881:1
so has part: feature:244239-252881:1:exon
subclass of: SO_0000010

117009947
type: Gene
SIO_000068: ncbigene

position:244239:1
position: 244239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252881:1
position: 252881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244239-252881:1:exon

ACHE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ACHE
product: acetylcholinesterase (Cartwright blood group), transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 18 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_033084327.1
SIO_010081: ACHE
subclass of: SO_0000673
so part of: ACHE
location: join(244239..244304,247316..248869,251431..251597,252439..252881)
location: region:244239-252881:1
so has part: feature:244239-244304:1:exon
so has part: feature:247316-248869:1:exon
so has part: feature:251431-251597:1:exon
so has part: feature:252439-252881:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:244239-244304:1:exon

position:244304:1
position: 244304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:247316-248869:1:exon

position:247316:1
position: 247316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248869:1
position: 248869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:251431-251597:1:exon

position:251431:1
position: 251431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251597:1
position: 251597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:252439-252881:1:exon

position:252439:1
position: 252439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ACHE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ACHE
product: acetylcholinesterase (Cartwright blood group), transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 18 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033084328.1
SIO_010081: ACHE
subclass of: SO_0000673
so part of: ACHE
location: join(244239..244304,247316..248869,251431..251597,252439..252591,252839..252863)
location: region:244239-252863:1
so has part: feature:244239-244304:1:exon
so has part: feature:247316-248869:1:exon
so has part: feature:251431-251597:1:exon
so has part: feature:252439-252591:1:exon
so has part: feature:252839-252863:1:exon

position:252863:1
position: 252863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244239-244304:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:247316-248869:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:251431-251597:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:252439-252591:1:exon

position:252591:1
position: 252591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:252839-252863:1:exon

position:252839:1
position: 252839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ACHE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ACHE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acetylcholinesterase
translation: MGGLPSPPSPFLPLPLLLLLLTPHPATTTEDLLVATSSGAVRGVPVPAGPSWRAAAFLGIPYAEPPLGPLRFAPPRPARPWGGVLDASSHPHACFQPVDTMFPGFGGSEMWNPNREMSEDCLYLNIWAPLPRPAAPAPVLVWIYGGGFYSGAASLDVYDGRFLAAAERVLVVSMNYRVGALGFLALPGHPEAPGNVGLLDQRLALRWVQANIAAFGGDPGAVTLFGESAGAASAGLHLLSGGSRGLFRRAVLQSGSPNGPWATVGAAEGRRRAARLGRLLGCGGAGAGGAVTNETELLLCLRAAAPPQLVEHEAAVLPQQGVFRFAFVPVVDGDFLADTPEALLGGAGRAEAEVLLGAVQDEGTYFLVYGVPGFGKDNESLISREEFLGGVRLGVPQANELAAEAVVLQYTDWLDQDNPVKNREALDDIVGDHNVVCPLMHFAQRWAERGGTVFAYLFDHRASNLLWPPWMGVPHGYEIEFVFGQPLNPGLNYTAEEEALSRRIMRYWGNFARTGDPNEPSERERRWPSYTAARQSYARLNARPLAVAQGLRAQACAFWTRFLPKLLNVTGPMEEAERQWRLEFHRWSSYMMRWKSQFELYSRQERCQPL
SIO_010081: ACHE
subclass of: SO_0000673
so part of: ACHE
location: join(247326..248869,251431..251597,252439..252560)
location: region:247326-252560:1
so has part: feature:247326-248869:1:exon
so has part: feature:251431-251597:1:exon
so has part: feature:252439-252560:1:exon

XP_032940218.1
type: Protein
SIO_000068: ncbiprotein

position:247326:1
position: 247326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252560:1
position: 252560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247326-248869:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:251431-251597:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:252439-252560:1:exon

ACHE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ACHE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acetylcholinesterase
translation: MGGLPSPPSPFLPLPLLLLLLTPHPATTTEDLLVATSSGAVRGVPVPAGPSWRAAAFLGIPYAEPPLGPLRFAPPRPARPWGGVLDASSHPHACFQPVDTMFPGFGGSEMWNPNREMSEDCLYLNIWAPLPRPAAPAPVLVWIYGGGFYSGAASLDVYDGRFLAAAERVLVVSMNYRVGALGFLALPGHPEAPGNVGLLDQRLALRWVQANIAAFGGDPGAVTLFGESAGAASAGLHLLSGGSRGLFRRAVLQSGSPNGPWATVGAAEGRRRAARLGRLLGCGGAGAGGAVTNETELLLCLRAAAPPQLVEHEAAVLPQQGVFRFAFVPVVDGDFLADTPEALLGGAGRAEAEVLLGAVQDEGTYFLVYGVPGFGKDNESLISREEFLGGVRLGVPQANELAAEAVVLQYTDWLDQDNPVKNREALDDIVGDHNVVCPLMHFAQRWAERGGTVFAYLFDHRASNLLWPPWMGVPHGYEIEFVFGQPLNPGLNYTAEEEALSRRIMRYWGNFARTGDPNEPSERERRWPSYTAARQSYARLNARPLAVAQGLRAQACAFWTRFLPKLLNVTGPMEEAERQWRLEFHRWSSYMMRWKSQFELYSRQERCQPL
SIO_010081: ACHE
subclass of: SO_0000673
so part of: ACHE
location: join(247326..248869,251431..251597,252439..252560)
location: region:247326-252560:1
so has part: feature:247326-248869:1:exon
so has part: feature:251431-251597:1:exon
so has part: feature:252439-252560:1:exon

XP_032940219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247326-248869:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:251431-251597:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:252439-252560:1:exon

C37H17orf49
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: C37H17orf49
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(253208..258076)
location: region:253208-258076:-1
so has part: feature:253208-258076:-1:exon
subclass of: SO_0000010

117009952
type: Gene
SIO_000068: ncbigene

position:253208:-1
position: 253208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258076:-1
position: 258076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:253208-258076:-1:exon

C37H17orf49
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: C37H17orf49
product: chromosome 37 C17orf49 homolog, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084337.1
SIO_010081: C37H17orf49
subclass of: SO_0000673
so part of: C37H17orf49
location: complement(join(253208..253343,253443..253535,254137..254306,255974..256068,257939..258076))
location: region:253208-258076:-1
so has part: feature:257939-258076:-1:exon
so has part: feature:255974-256068:-1:exon
so has part: feature:254137-254306:-1:exon
so has part: feature:253443-253535:-1:exon
so has part: feature:253208-253343:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:257939-258076:-1:exon

position:257939:-1
position: 257939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:255974-256068:-1:exon

position:255974:-1
position: 255974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256068:-1
position: 256068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:254137-254306:-1:exon

position:254137:-1
position: 254137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254306:-1
position: 254306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:253443-253535:-1:exon

position:253443:-1
position: 253443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253535:-1
position: 253535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:253208-253343:-1:exon

position:253343:-1
position: 253343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C37H17orf49
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: C37H17orf49
product: chromosome 37 C17orf49 homolog, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084335.2
SIO_010081: C37H17orf49
subclass of: SO_0000673
so part of: C37H17orf49
location: complement(join(253208..253343,253443..253535,254137..254306,254388..254489,255974..256068,257939..258068))
location: region:253208-258068:-1
so has part: feature:257939-258068:-1:exon
so has part: feature:255974-256068:-1:exon
so has part: feature:254388-254489:-1:exon
so has part: feature:254137-254306:-1:exon
so has part: feature:253443-253535:-1:exon
so has part: feature:253208-253343:-1:exon

position:258068:-1
position: 258068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257939-258068:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:255974-256068:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:254388-254489:-1:exon

position:254388:-1
position: 254388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254489:-1
position: 254489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:254137-254306:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:253443-253535:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:253208-253343:-1:exon

C37H17orf49
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: C37H17orf49
product: chromosome 37 C17orf49 homolog, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084336.1
SIO_010081: C37H17orf49
subclass of: SO_0000673
so part of: C37H17orf49
location: complement(join(253208..253343,253443..253535,254137..254306,254388..254489,255806..255852))
location: region:253208-255852:-1
so has part: feature:255806-255852:-1:exon
so has part: feature:254388-254489:-1:exon
so has part: feature:254137-254306:-1:exon
so has part: feature:253443-253535:-1:exon
so has part: feature:253208-253343:-1:exon

position:255852:-1
position: 255852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255806-255852:-1:exon

position:255806:-1
position: 255806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:254388-254489:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:254137-254306:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:253443-253535:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:253208-253343:-1:exon

C37H17orf49
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: C37H17orf49
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromatin complexes subunit BAP18 isoform X3
translation: MTSASTKVGEIFSAAGAAFTRLGELTMQLHPGTDSSPSGAQLKAAAKRKAYEDSGVPLPPPGADSPKKGPRKNPPGSGGAPHDTPGPPGKKLKVAEPPPSDSDPPGDLVDVEGFGDPPPKKLNFDQA
SIO_010081: C37H17orf49
subclass of: SO_0000673
so part of: C37H17orf49
location: complement(join(253339..253343,253443..253535,254137..254306,255974..256068,257939..257959))
location: region:253339-257959:-1
so has part: feature:257939-257959:-1:exon
so has part: feature:255974-256068:-1:exon
so has part: feature:254137-254306:-1:exon
so has part: feature:253443-253535:-1:exon
so has part: feature:253339-253343:-1:exon

XP_032940228.1
type: Protein
SIO_000068: ncbiprotein

position:253339:-1
position: 253339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257959:-1
position: 257959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257939-257959:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:255974-256068:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:254137-254306:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:253443-253535:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:253339-253343:-1:exon

C37H17orf49
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: C37H17orf49
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromatin complexes subunit BAP18 isoform X1
translation: MTSASTKVGEIFSAAGAAFTRLGELTMQLHPGTDSSPSGSRWTEPELSLLRGAVSRFGEDLNRLSALIKDRTVAQLKAAAKRKAYEDSGVPLPPPGADSPKKGPRKNPPGSGGAPHDTPGPPGKKLKVAEPPPSDSDPPGDLVDVEGFGDPPPKKLNFDQA
SIO_010081: C37H17orf49
subclass of: SO_0000673
so part of: C37H17orf49
location: complement(join(253339..253343,253443..253535,254137..254306,254388..254489,255974..256068,257939..257959))
location: region:253339-257959:-1
so has part: feature:257939-257959:-1:exon
so has part: feature:255974-256068:-1:exon
so has part: feature:254388-254489:-1:exon
so has part: feature:254137-254306:-1:exon
so has part: feature:253443-253535:-1:exon
so has part: feature:253339-253343:-1:exon

XP_032940226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257939-257959:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:255974-256068:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:254388-254489:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:254137-254306:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:253443-253535:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:253339-253343:-1:exon

C37H17orf49
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: C37H17orf49
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromatin complexes subunit BAP18 isoform X2
translation: MQLHPGTDSSPSGSRWTEPELSLLRGAVSRFGEDLNRLSALIKDRTVAQLKAAAKRKAYEDSGVPLPPPGADSPKKGPRKNPPGSGGAPHDTPGPPGKKLKVAEPPPSDSDPPGDLVDVEGFGDPPPKKLNFDQA
SIO_010081: C37H17orf49
subclass of: SO_0000673
so part of: C37H17orf49
location: complement(join(253339..253343,253443..253535,254137..254306,254388..254489,255806..255843))
location: region:253339-255843:-1
so has part: feature:255806-255843:-1:exon
so has part: feature:254388-254489:-1:exon
so has part: feature:254137-254306:-1:exon
so has part: feature:253443-253535:-1:exon
so has part: feature:253339-253343:-1:exon

XP_032940227.1
type: Protein
SIO_000068: ncbiprotein

position:255843:-1
position: 255843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255806-255843:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:254388-254489:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:254137-254306:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:253443-253535:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:253339-253343:-1:exon

RNASEK
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: RNASEK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(258308..261995)
location: region:258308-261995:-1
so has part: feature:258308-261995:-1:exon
subclass of: SO_0000010

117009954
type: Gene
SIO_000068: ncbigene

position:258308:-1
position: 258308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261995:-1
position: 261995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258308-261995:-1:exon

RNASEK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: RNASEK
product: ribonuclease K
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084338.2
SIO_010081: RNASEK
subclass of: SO_0000673
so part of: RNASEK
location: complement(join(258308..258615,259709..259788,261741..261995))
location: region:258308-261995:-1
so has part: feature:261741-261995:-1:exon
so has part: feature:259709-259788:-1:exon
so has part: feature:258308-258615:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:261741-261995:-1:exon

position:261741:-1
position: 261741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:259709-259788:-1:exon

position:259709:-1
position: 259709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259788:-1
position: 259788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:258308-258615:-1:exon

position:258615:-1
position: 258615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNASEK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: RNASEK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribonuclease kappa
translation: MVSLLCCGPKMAACGLVLSAWGVVMLVLLGIFFNVHSAVLIEDVPFTEEDFTDGPERIYALYEQVSYNCFIAAGLYALLGGFSLCQTRLNKRKEYMVR
SIO_010081: RNASEK
subclass of: SO_0000673
so part of: RNASEK
location: complement(join(258477..258615,259709..259788,261741..261818))
location: region:258477-261818:-1
so has part: feature:261741-261818:-1:exon
so has part: feature:259709-259788:-1:exon
so has part: feature:258477-258615:-1:exon

XP_032940229.1
type: Protein
SIO_000068: ncbiprotein

position:258477:-1
position: 258477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261818:-1
position: 261818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261741-261818:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:259709-259788:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:258477-258615:-1:exon

LOC117009889
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009889
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 263678..278598
location: region:263678-278598:1
so has part: feature:263678-278598:1:exon
subclass of: SO_0000010

117009889
type: Gene
SIO_000068: ncbigene

position:263678:1
position: 263678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278598:1
position: 278598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263678-278598:1:exon

LOC117009889
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009889
product: solute carrier family 2, facilitated glucose transporter member 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084242.1
SIO_010081: LOC117009889
subclass of: SO_0000673
so part of: LOC117009889
location: join(263678..263782,264624..264767,265516..265676,266355..266479,266889..267004,267816..267975,268785..268966,270566..270670,271315..271410,273654..273857,278336..278598)
location: region:263678-278598:1
so has part: feature:263678-263782:1:exon
so has part: feature:264624-264767:1:exon
so has part: feature:265516-265676:1:exon
so has part: feature:266355-266479:1:exon
so has part: feature:266889-267004:1:exon
so has part: feature:267816-267975:1:exon
so has part: feature:268785-268966:1:exon
so has part: feature:270566-270670:1:exon
so has part: feature:271315-271410:1:exon
so has part: feature:273654-273857:1:exon
so has part: feature:278336-278598:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:263678-263782:1:exon

position:263782:1
position: 263782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:264624-264767:1:exon

position:264624:1
position: 264624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264767:1
position: 264767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:265516-265676:1:exon

position:265516:1
position: 265516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265676:1
position: 265676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:266355-266479:1:exon

position:266355:1
position: 266355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266479:1
position: 266479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:266889-267004:1:exon

position:266889:1
position: 266889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267004:1
position: 267004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:267816-267975:1:exon

position:267816:1
position: 267816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267975:1
position: 267975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:268785-268966:1:exon

position:268785:1
position: 268785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268966:1
position: 268966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:270566-270670:1:exon

position:270566:1
position: 270566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270670:1
position: 270670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:271315-271410:1:exon

position:271315:1
position: 271315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271410:1
position: 271410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:273654-273857:1:exon

position:273654:1
position: 273654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273857:1
position: 273857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:278336-278598:1:exon

position:278336:1
position: 278336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117009889
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009889
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 2, facilitated glucose transporter member 4-like
translation: MPRGFQQIQEDEEEDEGGPRCPPGGSPPPSLTPALALTVFAASLSSLGFGFNIGVINAPQKVLEGEYNATWARRWGSPPPPQTISLLWSLSVAIFSVGGMGTALAGGALAERLGRKGALLATNGLAVVGGALMGGAKLGPTYTLIIIGRFIVGAYSGLVSVLVPLYVGEVAPLRLRGALGTLHQLGIVLGILGAQVLGLRALLGTPAAWPALFGAGLLPAALQLLLLPLCPESPRFLLARGQRGRARRGLSRLAGPAAEAGLAALEAELGRGPAPKVGLLELCRSRRYRQPLIVTLGLQLAQQLSGINAIFYYSTSIFEGAGLRDPAVGTIGTGVVNVAATALSVVLVERAGRRLLQLVGLLGMMGCAGTLGVALKLGGPVWGALALASALAFVGFFAVGPGPLPWFVGAELFPPGPRGAALGLAGLVNWASNTAVAMAFPALQDALGPFVFLLFGGLLAGFALFTFLLLPETRGRTFPGGGDPQNPSPPPLGTPLEKDTELQCLATHEEP
SIO_010081: LOC117009889
subclass of: SO_0000673
so part of: LOC117009889
location: join(263744..263782,264624..264767,265516..265676,266355..266479,266889..267004,267816..267975,268785..268966,270566..270670,271315..271410,273654..273857,278336..278539)
location: region:263744-278539:1
so has part: feature:263744-263782:1:exon
so has part: feature:264624-264767:1:exon
so has part: feature:265516-265676:1:exon
so has part: feature:266355-266479:1:exon
so has part: feature:266889-267004:1:exon
so has part: feature:267816-267975:1:exon
so has part: feature:268785-268966:1:exon
so has part: feature:270566-270670:1:exon
so has part: feature:271315-271410:1:exon
so has part: feature:273654-273857:1:exon
so has part: feature:278336-278539:1:exon

XP_032940133.1
type: Protein
SIO_000068: ncbiprotein

position:263744:1
position: 263744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278539:1
position: 278539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263744-263782:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:264624-264767:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:265516-265676:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:266355-266479:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:266889-267004:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:267816-267975:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:268785-268966:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:270566-270670:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:271315-271410:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273654-273857:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:278336-278539:1:exon

EIF5A
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: EIF5A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 279626..295090
location: region:279626-295090:1
so has part: feature:279626-295090:1:exon
subclass of: SO_0000010

117009919
type: Gene
SIO_000068: ncbigene

position:279626:1
position: 279626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295090:1
position: 295090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279626-295090:1:exon

EIF5A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: EIF5A
product: eukaryotic translation initiation factor 5A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033084281.1
SIO_010081: EIF5A
subclass of: SO_0000673
so part of: EIF5A
location: join(279626..279704,283436..283607,288741..288845,291927..292058,293462..293529,295018..295090)
location: region:279626-295090:1
so has part: feature:279626-279704:1:exon
so has part: feature:283436-283607:1:exon
so has part: feature:288741-288845:1:exon
so has part: feature:291927-292058:1:exon
so has part: feature:293462-293529:1:exon
so has part: feature:295018-295090:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:279626-279704:1:exon

position:279704:1
position: 279704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:283436-283607:1:exon

position:283436:1
position: 283436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283607:1
position: 283607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:288741-288845:1:exon

position:288741:1
position: 288741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288845:1
position: 288845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:291927-292058:1:exon

position:291927:1
position: 291927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292058:1
position: 292058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:293462-293529:1:exon

position:293462:1
position: 293462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293529:1
position: 293529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:295018-295090:1:exon

position:295018:1
position: 295018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EIF5A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: EIF5A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 5A-1
translation: MADDLDFETGDAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQDGYLSLLQDSGEVREDLRLPEGELGREIEQKYDCGEEILITVLSAMTEEAAVAIKAMAK
SIO_010081: EIF5A
subclass of: SO_0000673
so part of: EIF5A
location: join(283443..283607,288741..288845,291927..292058,293462..293524)
location: region:283443-293524:1
so has part: feature:283443-283607:1:exon
so has part: feature:288741-288845:1:exon
so has part: feature:291927-292058:1:exon
so has part: feature:293462-293524:1:exon

XP_032940172.1
type: Protein
SIO_000068: ncbiprotein

position:283443:1
position: 283443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293524:1
position: 293524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283443-283607:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:288741-288845:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:291927-292058:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:293462-293524:1:exon

LOC117009927
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009927
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(290059..291878)
location: region:290059-291878:-1
so has part: feature:290059-291878:-1:exon
subclass of: SO_0000011

117009927
type: Gene
SIO_000068: ncbigene

position:290059:-1
position: 290059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291878:-1
position: 291878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290059-291878:-1:exon

LOC117009927
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117009927
product: uncharacterized LOC117009927
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004420561.1
SIO_010081: LOC117009927
subclass of: SO_0000673
so part of: LOC117009927
location: complement(join(290059..290251,291449..291811,291862..291878))
location: region:290059-291878:-1
so has part: feature:291862-291878:-1:exon
so has part: feature:291449-291811:-1:exon
so has part: feature:290059-290251:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:291862-291878:-1:exon

position:291862:-1
position: 291862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:291449-291811:-1:exon

position:291449:-1
position: 291449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291811:-1
position: 291811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:290059-290251:-1:exon

position:290251:-1
position: 290251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009890
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009890
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(297523..332558)
location: region:297523-332558:-1
so has part: feature:297523-332558:-1:exon
subclass of: SO_0000010

117009890
type: Gene
SIO_000068: ncbigene

position:297523:-1
position: 297523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332558:-1
position: 332558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297523-332558:-1:exon

LOC117009890
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009890
product: polyunsaturated fatty acid lipoxygenase ALOX15B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 51% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084243.1
SIO_010081: LOC117009890
subclass of: SO_0000673
so part of: LOC117009890
location: complement(join(297523..297702,300656..300826,306750..306850,307505..307626,309262..309431,311252..311338,314248..314442,315881..315955,316679..316822,322774..322946,324183..324283,324580..324963,330355..330439,331133..331376,332412..332558))
location: region:297523-332558:-1
so has part: feature:332412-332558:-1:exon
so has part: feature:331133-331376:-1:exon
so has part: feature:330355-330439:-1:exon
so has part: feature:324580-324963:-1:exon
so has part: feature:324183-324283:-1:exon
so has part: feature:322774-322946:-1:exon
so has part: feature:316679-316822:-1:exon
so has part: feature:315881-315955:-1:exon
so has part: feature:314248-314442:-1:exon
so has part: feature:311252-311338:-1:exon
so has part: feature:309262-309431:-1:exon
so has part: feature:307505-307626:-1:exon
so has part: feature:306750-306850:-1:exon
so has part: feature:300656-300826:-1:exon
so has part: feature:297523-297702:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:332412-332558:-1:exon

position:332412:-1
position: 332412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:331133-331376:-1:exon

position:331133:-1
position: 331133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331376:-1
position: 331376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:330355-330439:-1:exon

position:330355:-1
position: 330355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330439:-1
position: 330439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:324580-324963:-1:exon

position:324580:-1
position: 324580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324963:-1
position: 324963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:324183-324283:-1:exon

position:324183:-1
position: 324183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324283:-1
position: 324283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:322774-322946:-1:exon

position:322774:-1
position: 322774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322946:-1
position: 322946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:316679-316822:-1:exon

position:316679:-1
position: 316679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316822:-1
position: 316822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:315881-315955:-1:exon

position:315881:-1
position: 315881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315955:-1
position: 315955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:314248-314442:-1:exon

position:314248:-1
position: 314248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314442:-1
position: 314442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:311252-311338:-1:exon

position:311252:-1
position: 311252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311338:-1
position: 311338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:309262-309431:-1:exon

position:309262:-1
position: 309262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309431:-1
position: 309431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:307505-307626:-1:exon

position:307505:-1
position: 307505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307626:-1
position: 307626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:306750-306850:-1:exon

position:306750:-1
position: 306750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306850:-1
position: 306850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:300656-300826:-1:exon

position:300656:-1
position: 300656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300826:-1
position: 300826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:297523-297702:-1:exon

position:297702:-1
position: 297702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009890
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyunsaturated fatty acid lipoxygenase ALOX15B-like
translation: MARYRLGVSTGPEWGGGTLGGVTLTLVGTAGVAPPCHLGWPQHRLSAGSTVWLDVVSPQPLGTLLSLRLHKEPLLSLVPDRWFCATVVVTGPHPGDTRGDSEGDSEDVPKATFPCHRWVESGDMELREGTARLPSDAARVPELLRQRQEERRERREAFEWAPYAPGWPWRLRALPPSLCPWPAPRAEMTSLPGDATTPLPAPPLKQPLPESPEMTSQEATPLQEGKTSQEEKTSQEDKTSHKEMTSHDEMMSRGEVTSHEEMTSPLSPSLSFPLVHRAQLAARAAAAQIRIRLRGLRSGSSWSSFDDVRAALEGPGTPISEYVVQHWQEDAFFGEQFLSGVNPVLLRRCPRLPPNFPLTAPMVVPSLGPDTSLEKEMEAGRVFLADYALLEGLPTNVIEGRPQFVAAPLCLLWLNPSGQLLPVAIQLSQHPGPSSPIFLPGSQGWALAKLWLSQHPGPSSPIFLPGSQGWALAKLWVRGSHFILHEMVTHLLHGHFLAEAFAVATQRLPAAHPVHQLLLPHLRFTFHINILARETLLNPGGIIDQATSIGREGTLALVARGVAALTMAELCVPEDIRERGVGDIPGYHYRDDATAIWEAIDSYVQAIVSLFYPGDAAVAEDEELQDWVGEIFRYGVLGNQGSGFPSRLGSRPELVRFLTMIIFCCSARHAAVNSGQYDYAAWMPNTPGSLQRPPPAAPEEATEELLVATMPGPAATGALLALLSVVSYEGGEPRPLGRRSQDLLLSAPALRALGRFRSRLAAVSERIRARNARLGLPYPYLDPAGVQESISI
SIO_010081: LOC117009890
subclass of: SO_0000673
so part of: LOC117009890
location: complement(join(297523..297702,300656..300826,306750..306850,307505..307626,309262..309431,311252..311338,314248..314442,315881..315955,316679..316822,322774..322946,324183..324283,324580..324963,330355..330439,331133..331376,332412..332558))
location: region:297523-332558:-1
so has part: feature:332412-332558:-1:exon
so has part: feature:331133-331376:-1:exon
so has part: feature:330355-330439:-1:exon
so has part: feature:324580-324963:-1:exon
so has part: feature:324183-324283:-1:exon
so has part: feature:322774-322946:-1:exon
so has part: feature:316679-316822:-1:exon
so has part: feature:315881-315955:-1:exon
so has part: feature:314248-314442:-1:exon
so has part: feature:311252-311338:-1:exon
so has part: feature:309262-309431:-1:exon
so has part: feature:307505-307626:-1:exon
so has part: feature:306750-306850:-1:exon
so has part: feature:300656-300826:-1:exon
so has part: feature:297523-297702:-1:exon

XP_032940134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:332412-332558:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:331133-331376:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:330355-330439:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:324580-324963:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:324183-324283:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322774-322946:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:316679-316822:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:315881-315955:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:314248-314442:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:311252-311338:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:309262-309431:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:307505-307626:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:306750-306850:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:300656-300826:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:297523-297702:-1:exon

LOC117009891
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009891
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(342341..379034)
location: region:342341-379034:-1
so has part: feature:342341-379034:-1:exon
subclass of: SO_0000010

117009891
type: Gene
SIO_000068: ncbigene

position:342341:-1
position: 342341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379034:-1
position: 379034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342341-379034:-1:exon

LOC117009891
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009891
product: polyunsaturated fatty acid lipoxygenase ALOX8-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_042780118.1
SIO_010081: LOC117009891
subclass of: SO_0000673
so part of: LOC117009891
location: complement(join(342341..342634,342867..342946,344998..345168,347320..347420,348223..348344,351804..351973,353723..353809,356822..357064,363923..363991,364867..365039,367698..367801,369097..369213,372768..372849,374633..374767,375844..376293,376339..376402,376540..376617,376782..376928,378884..379034))
location: region:342341-379034:-1
so has part: feature:378884-379034:-1:exon
so has part: feature:376782-376928:-1:exon
so has part: feature:376540-376617:-1:exon
so has part: feature:376339-376402:-1:exon
so has part: feature:375844-376293:-1:exon
so has part: feature:374633-374767:-1:exon
so has part: feature:372768-372849:-1:exon
so has part: feature:369097-369213:-1:exon
so has part: feature:367698-367801:-1:exon
so has part: feature:364867-365039:-1:exon
so has part: feature:363923-363991:-1:exon
so has part: feature:356822-357064:-1:exon
so has part: feature:353723-353809:-1:exon
so has part: feature:351804-351973:-1:exon
so has part: feature:348223-348344:-1:exon
so has part: feature:347320-347420:-1:exon
so has part: feature:344998-345168:-1:exon
so has part: feature:342867-342946:-1:exon
so has part: feature:342341-342634:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:378884-379034:-1:exon

position:378884:-1
position: 378884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:376782-376928:-1:exon

position:376782:-1
position: 376782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376928:-1
position: 376928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:376540-376617:-1:exon

position:376540:-1
position: 376540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376617:-1
position: 376617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:376339-376402:-1:exon

position:376339:-1
position: 376339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376402:-1
position: 376402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:375844-376293:-1:exon

position:375844:-1
position: 375844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376293:-1
position: 376293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:374633-374767:-1:exon

position:374633:-1
position: 374633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374767:-1
position: 374767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:372768-372849:-1:exon

position:372768:-1
position: 372768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372849:-1
position: 372849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:369097-369213:-1:exon

position:369097:-1
position: 369097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369213:-1
position: 369213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:367698-367801:-1:exon

position:367698:-1
position: 367698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367801:-1
position: 367801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:364867-365039:-1:exon

position:364867:-1
position: 364867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365039:-1
position: 365039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:363923-363991:-1:exon

position:363923:-1
position: 363923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363991:-1
position: 363991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:356822-357064:-1:exon

position:356822:-1
position: 356822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357064:-1
position: 357064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:353723-353809:-1:exon

position:353723:-1
position: 353723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353809:-1
position: 353809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:351804-351973:-1:exon

position:351804:-1
position: 351804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351973:-1
position: 351973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:348223-348344:-1:exon

position:348223:-1
position: 348223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348344:-1
position: 348344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:347320-347420:-1:exon

position:347320:-1
position: 347320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347420:-1
position: 347420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:344998-345168:-1:exon

position:344998:-1
position: 344998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345168:-1
position: 345168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:342867-342946:-1:exon

position:342867:-1
position: 342867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342946:-1
position: 342946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:342341-342634:-1:exon

position:342634:-1
position: 342634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009891
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009891
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyunsaturated fatty acid lipoxygenase ALOX8-like
translation: MAAYRVRVRTGTAPGAGTSDAIAVTLVGTRGSSPRTVLDRWGPDFHCGAGGSDARVTAVARWRWWWPGGGDTVTMVAQPWWQRWPGDGDSGGSSDTAMVTDYDVTVPCHLGHLLVLRVHSDSDTVTDYDVTVPCHLGHLLVLRVHNSDTMTLTLSPMSPQVTDYDVTVPCHLGHLLVLRVHKGPCRGLPESSWYLESVTVWGQRGDNGDNGGDTLGDSDSEEEVAQEDGDGDSEEEEVTEEEEEEEEEESDSDTEGDTEGDIEGDIEEDIEEDIESDIEGDNEGDGAGDVTAVTSGDATPPGDSRVPSGDTDDVAALGPFHFPCYRWLQGFGTWELPEGTATTPAMERHPQRQRQRRRHLVQQRRRYRLAPFAPGLPWSLPAGTPLDPDLSYSLAKASAFYLRGSAANLEAKLRGFLAQPRSWPSVEAMTRVFRCFHTPVTEYVVQHWQEDAFFGEQFLSGVNPVLLRRCPRLPPNFPLTAPMVAPSLGPDTSLEKEMEFPLTAPMVAPSLGPDTSLEKEMEFSYSSPIFRGPPQLSQHPGPESPIFLPGDPPWLWALAKAWVRSSEFHVHEALTHLLRAHLLGEVFALATLRQLPPQHPLFKLLVPHMRFTVQIGALARRFLLNPGGVFDRAVALGRRGLLALVARGLRELRWRSLVLPRDLRHRGVAATKRNHFGQDATRVWAAIQRLVSGVLSLYYPSDGAVRDDPELQAWVREIFLRGFLGRRRSGVPSRLDSVRGLVTFVTTVIYTCSAHHAATNSGQFELSAFPPNAPAAMRSPPPRSKSPLSEREFLEALPAMNTTATVLAVLWVLRNEPLDMRPLGHYPERHFTDPRVLIQFRLFQCSHIPSIPSKPSLCPQRPLGHYPERHFTDPRVLIQFRLFRRRLRGISRKIRARNAGMERPYPYLDPENIENSVAI
SIO_010081: LOC117009891
subclass of: SO_0000673
so part of: LOC117009891
location: complement(join(342415..342634,342867..342946,344998..345168,347320..347420,348223..348344,351804..351973,353723..353809,356822..357064,363923..363991,364867..365039,367698..367801,369097..369213,372768..372849,374633..374767,375844..376293,376339..376402,376540..376617,376782..376928,378884..379030))
location: region:342415-379030:-1
so has part: feature:378884-379030:-1:exon
so has part: feature:376782-376928:-1:exon
so has part: feature:376540-376617:-1:exon
so has part: feature:376339-376402:-1:exon
so has part: feature:375844-376293:-1:exon
so has part: feature:374633-374767:-1:exon
so has part: feature:372768-372849:-1:exon
so has part: feature:369097-369213:-1:exon
so has part: feature:367698-367801:-1:exon
so has part: feature:364867-365039:-1:exon
so has part: feature:363923-363991:-1:exon
so has part: feature:356822-357064:-1:exon
so has part: feature:353723-353809:-1:exon
so has part: feature:351804-351973:-1:exon
so has part: feature:348223-348344:-1:exon
so has part: feature:347320-347420:-1:exon
so has part: feature:344998-345168:-1:exon
so has part: feature:342867-342946:-1:exon
so has part: feature:342415-342634:-1:exon

XP_042636052.1
type: Protein
SIO_000068: ncbiprotein

position:342415:-1
position: 342415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379030:-1
position: 379030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378884-379030:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376782-376928:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:376540-376617:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:376339-376402:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:375844-376293:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:374633-374767:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:372768-372849:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:369097-369213:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:367698-367801:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:364867-365039:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:363923-363991:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:356822-357064:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:353723-353809:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:351804-351973:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:348223-348344:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:347320-347420:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:344998-345168:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:342867-342946:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:342415-342634:-1:exon

FIS1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: FIS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 379144..390409
location: region:379144-390409:1
so has part: feature:379144-390409:1:exon
subclass of: SO_0000010

117009920
type: Gene
SIO_000068: ncbigene

position:379144:1
position: 379144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390409:1
position: 390409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379144-390409:1:exon

FIS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: FIS1
product: fission, mitochondrial 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033084282.2
SIO_010081: FIS1
subclass of: SO_0000673
so part of: FIS1
location: join(379144..379254,383204..383336,388087..388163,389647..389752,390208..390409)
location: region:379144-390409:1
so has part: feature:379144-379254:1:exon
so has part: feature:383204-383336:1:exon
so has part: feature:388087-388163:1:exon
so has part: feature:389647-389752:1:exon
so has part: feature:390208-390409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:379144-379254:1:exon

position:379254:1
position: 379254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:383204-383336:1:exon

position:383204:1
position: 383204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383336:1
position: 383336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:388087-388163:1:exon

position:388087:1
position: 388087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388163:1
position: 388163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:389647-389752:1:exon

position:389647:1
position: 389647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389752:1
position: 389752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:390208-390409:1:exon

position:390208:1
position: 390208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FIS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: FIS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial fission 1 protein
translation: MGKRRGDAASLPPSLPARLPGAMDPEFDDVVAVEDLMALERRYAAERQQGAPTRQCRFEYGWGLVRSRYRDDIAKGVALLAELLPETPPEEQRDVLFYLALGNYRLKEYERSLEHLERLLAAEPQNPQVLRLRSRVRSRLRRDGLVGAAIVGGVVMGVAGLLGVAISRATRH
SIO_010081: FIS1
subclass of: SO_0000673
so part of: FIS1
location: join(379144..379254,383204..383336,388087..388163,389647..389752,390208..390299)
location: region:379144-390299:1
so has part: feature:379144-379254:1:exon
so has part: feature:383204-383336:1:exon
so has part: feature:388087-388163:1:exon
so has part: feature:389647-389752:1:exon
so has part: feature:390208-390299:1:exon

XP_032940173.2
type: Protein
SIO_000068: ncbiprotein

position:390299:1
position: 390299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379144-379254:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:383204-383336:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:388087-388163:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389647-389752:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:390208-390299:1:exon

LOC117009928
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009928
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 399788..405158
location: region:399788-405158:1
so has part: feature:399788-405158:1:exon
subclass of: SO_0000011

117009928
type: Gene
SIO_000068: ncbigene

position:399788:1
position: 399788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405158:1
position: 405158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399788-405158:1:exon

LOC117009928
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117009928
product: uncharacterized LOC117009928
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004420562.1
SIO_010081: LOC117009928
subclass of: SO_0000673
so part of: LOC117009928
location: join(399788..399829,401916..401997,405085..405158)
location: region:399788-405158:1
so has part: feature:399788-399829:1:exon
so has part: feature:401916-401997:1:exon
so has part: feature:405085-405158:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:399788-399829:1:exon

position:399829:1
position: 399829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:401916-401997:1:exon

position:401916:1
position: 401916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401997:1
position: 401997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:405085-405158:1:exon

position:405085:1
position: 405085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117009924
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009924
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(412697..>423111)
location: region:412697-423111:-1
so has part: feature:412697-423111:-1:exon
subclass of: SO_0000010

117009924
type: Gene
SIO_000068: ncbigene

position:412697:-1
position: 412697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:423111:-1
position: 423111
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412697-423111:-1:exon

LOC117009924
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009924
product: vitelline membrane outer layer protein 1 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033084286.1
SIO_010081: LOC117009924
subclass of: SO_0000673
so part of: LOC117009924
location: complement(join(412697..413027,418413..418513,422866..>423111))
location: region:412697-423111:-1
so has part: feature:422866-423111:-1:exon
so has part: feature:418413-418513:-1:exon
so has part: feature:412697-413027:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:422866-423111:-1:exon

position:422866:-1
position: 422866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:418413-418513:-1:exon

position:418413:-1
position: 418413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418513:-1
position: 418513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:412697-413027:-1:exon

position:413027:-1
position: 413027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009924
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009924
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vitelline membrane outer layer protein 1 homolog
translation: SPLSPVALVALVALVALVALVAPVVADRTRCDIGHRPELSLRLAWEREEPGALLVTNGGHWGHWGDAQFCPEESFVVGFQLKVQPYQGFFGDDTGLNGVRLLCDTGTHTVTSSVGPFGDWTPPELCPPGERVVSFRLRVEPSQGLWDDAAATDVAAMCTGGSRLEGGGLPRGEWGQWSERCAPACSVCGVRARVEPAKGGDNSGLNDLKMYCCT
SIO_010081: LOC117009924
subclass of: SO_0000673
so part of: LOC117009924
location: complement(join(412730..413027,418413..418513,422866..>423111))
location: region:412730-423111:-1
so has part: feature:422866-423111:-1:exon
so has part: feature:418413-418513:-1:exon
so has part: feature:412730-413027:-1:exon

XP_032940177.1
type: Protein
SIO_000068: ncbiprotein

position:412730:-1
position: 412730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422866-423111:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:418413-418513:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:412730-413027:-1:exon

LOC117009926
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009926
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(437434..443448)
location: region:437434-443448:-1
so has part: feature:437434-443448:-1:exon
subclass of: SO_0000011

117009926
type: Gene
SIO_000068: ncbigene

position:437434:-1
position: 437434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443448:-1
position: 443448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437434-443448:-1:exon

LOC117009926
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117009926
product: uncharacterized LOC117009926
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XR_004420560.1
SIO_010081: LOC117009926
subclass of: SO_0000673
so part of: LOC117009926
location: complement(join(437434..437532,439143..439180,441314..441382,443423..443448))
location: region:437434-443448:-1
so has part: feature:443423-443448:-1:exon
so has part: feature:441314-441382:-1:exon
so has part: feature:439143-439180:-1:exon
so has part: feature:437434-437532:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:443423-443448:-1:exon

position:443423:-1
position: 443423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:441314-441382:-1:exon

position:441314:-1
position: 441314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441382:-1
position: 441382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:439143-439180:-1:exon

position:439143:-1
position: 439143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439180:-1
position: 439180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:437434-437532:-1:exon

position:437532:-1
position: 437532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009892
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009892
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 445577..476707
location: region:445577-476707:1
so has part: feature:445577-476707:1:exon
subclass of: SO_0000010

117009892
type: Gene
SIO_000068: ncbigene

position:445577:1
position: 445577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476707:1
position: 476707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445577-476707:1:exon

LOC117009892
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009892
product: aurora kinase B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084245.1
SIO_010081: LOC117009892
subclass of: SO_0000673
so part of: LOC117009892
location: join(445577..445615,446265..446340,448169..448223,450159..450247,451196..451283,451426..451513,451745..451764,452584..452775,455444..455582,467448..467596,471872..472046,476496..476707)
location: region:445577-476707:1
so has part: feature:445577-445615:1:exon
so has part: feature:446265-446340:1:exon
so has part: feature:448169-448223:1:exon
so has part: feature:450159-450247:1:exon
so has part: feature:451196-451283:1:exon
so has part: feature:451426-451513:1:exon
so has part: feature:451745-451764:1:exon
so has part: feature:452584-452775:1:exon
so has part: feature:455444-455582:1:exon
so has part: feature:467448-467596:1:exon
so has part: feature:471872-472046:1:exon
so has part: feature:476496-476707:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:445577-445615:1:exon

position:445615:1
position: 445615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:446265-446340:1:exon

position:446265:1
position: 446265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446340:1
position: 446340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:448169-448223:1:exon

position:448169:1
position: 448169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448223:1
position: 448223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:450159-450247:1:exon

position:450159:1
position: 450159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450247:1
position: 450247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:451196-451283:1:exon

position:451196:1
position: 451196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451283:1
position: 451283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:451426-451513:1:exon

position:451426:1
position: 451426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451513:1
position: 451513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:451745-451764:1:exon

position:451745:1
position: 451745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451764:1
position: 451764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:452584-452775:1:exon

position:452584:1
position: 452584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452775:1
position: 452775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:455444-455582:1:exon

position:455444:1
position: 455444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455582:1
position: 455582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:467448-467596:1:exon

position:467448:1
position: 467448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467596:1
position: 467596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:471872-472046:1:exon

position:471872:1
position: 471872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472046:1
position: 472046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:476496-476707:1:exon

position:476496:1
position: 476496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117009892
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009892
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aurora kinase B-like
translation: MAQKENVAPTLTKGPAPPPLRVPRKDPPGSEPPGKAPTGSGRVPLELSAVPAPPPPVRTFSLEDFEVGRPLGKGKFGNVYLAHLSPGAPFPWRISRWAGPWARGSSGTFTWLTCPRRTFSLEDFEVGRPLGKGKFGNVYLAHLSQVLSGVPRRTFSLEDFEVGRPLGKGKFGNVYLARERRSGFLVALKVLFKSQVEQEGVEHQLRREIEIQAHLRHPNVLRLYNYFHDRRRVFLILEFAPRGELYKELQRCRRLDATRTATLMEELADALLYCHGRKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRRTLCGTLDYLPPEMVEGGGHDEKVDLWCLGVLCYELLAGHPPFESPTAAETYKRITQVDLHFPPHLPPGARDLIERLLQRDPARRLGLRGSWGTPWVRGHSRRVLPPGHRPLTSDP
SIO_010081: LOC117009892
subclass of: SO_0000673
so part of: LOC117009892
location: join(445577..445615,446265..446340,448169..448223,450159..450247,451196..451283,451426..451513,451745..451764,452584..452775,455444..455582,467448..467596,471872..472046,476496..476675)
location: region:445577-476675:1
so has part: feature:445577-445615:1:exon
so has part: feature:446265-446340:1:exon
so has part: feature:448169-448223:1:exon
so has part: feature:450159-450247:1:exon
so has part: feature:451196-451283:1:exon
so has part: feature:451426-451513:1:exon
so has part: feature:451745-451764:1:exon
so has part: feature:452584-452775:1:exon
so has part: feature:455444-455582:1:exon
so has part: feature:467448-467596:1:exon
so has part: feature:471872-472046:1:exon
so has part: feature:476496-476675:1:exon

XP_032940136.1
type: Protein
SIO_000068: ncbiprotein

position:476675:1
position: 476675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445577-445615:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:446265-446340:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:448169-448223:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450159-450247:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:451196-451283:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:451426-451513:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:451745-451764:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:452584-452775:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:455444-455582:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:467448-467596:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:471872-472046:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:476496-476675:1:exon

VAMP2
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: VAMP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 480409..501605
location: region:480409-501605:1
so has part: feature:480409-501605:1:exon
subclass of: SO_0000010

117009925
type: Gene
SIO_000068: ncbigene

position:480409:1
position: 480409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501605:1
position: 501605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480409-501605:1:exon

VAMP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: VAMP2
product: vesicle associated membrane protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084287.1
SIO_010081: VAMP2
subclass of: SO_0000673
so part of: VAMP2
location: join(480409..480448,486104..486227,495218..495376,500052..500103,501512..501605)
location: region:480409-501605:1
so has part: feature:480409-480448:1:exon
so has part: feature:486104-486227:1:exon
so has part: feature:495218-495376:1:exon
so has part: feature:500052-500103:1:exon
so has part: feature:501512-501605:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:480409-480448:1:exon

position:480448:1
position: 480448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:486104-486227:1:exon

position:486104:1
position: 486104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486227:1
position: 486227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:495218-495376:1:exon

position:495218:1
position: 495218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495376:1
position: 495376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:500052-500103:1:exon

position:500052:1
position: 500052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500103:1
position: 500103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:501512-501605:1:exon

position:501512:1
position: 501512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VAMP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: VAMP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicle-associated membrane protein 2
translation: MSAPSAPAAPPPAAAEGGGAAAPPPNLTSNRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNLKMMIILGVICAIVLIIIIVYFST
SIO_010081: VAMP2
subclass of: SO_0000673
so part of: VAMP2
location: join(480447..480448,486104..486227,495218..495376,500052..500103,501512..501528)
location: region:480447-501528:1
so has part: feature:480447-480448:1:exon
so has part: feature:486104-486227:1:exon
so has part: feature:495218-495376:1:exon
so has part: feature:500052-500103:1:exon
so has part: feature:501512-501528:1:exon

XP_032940178.1
type: Protein
SIO_000068: ncbiprotein

position:480447:1
position: 480447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501528:1
position: 501528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480447-480448:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:486104-486227:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:495218-495376:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:500052-500103:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:501512-501528:1:exon

TRAPPC1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: TRAPPC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(511038..527802)
location: region:511038-527802:-1
so has part: feature:511038-527802:-1:exon
subclass of: SO_0000010

117009921
type: Gene
SIO_000068: ncbigene

position:511038:-1
position: 511038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527802:-1
position: 527802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511038-527802:-1:exon

TRAPPC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: TRAPPC1
product: trafficking protein particle complex subunit 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084284.2
SIO_010081: TRAPPC1
subclass of: SO_0000673
so part of: TRAPPC1
location: complement(join(511038..511077,512478..512629,516378..516516,520349..520419,527623..527802))
location: region:511038-527802:-1
so has part: feature:527623-527802:-1:exon
so has part: feature:520349-520419:-1:exon
so has part: feature:516378-516516:-1:exon
so has part: feature:512478-512629:-1:exon
so has part: feature:511038-511077:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:527623-527802:-1:exon

position:527623:-1
position: 527623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:520349-520419:-1:exon

position:520349:-1
position: 520349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520419:-1
position: 520419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:516378-516516:-1:exon

position:516378:-1
position: 516378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:516516:-1
position: 516516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:512478-512629:-1:exon

position:512478:-1
position: 512478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512629:-1
position: 512629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:511038-511077:-1:exon

position:511077:-1
position: 511077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRAPPC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: TRAPPC1
product: trafficking protein particle complex subunit 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033084283.2
SIO_010081: TRAPPC1
subclass of: SO_0000673
so part of: TRAPPC1
location: complement(join(512436..512629,516378..516516,520349..520419,527623..527802))
location: region:512436-527802:-1
so has part: feature:527623-527802:-1:exon
so has part: feature:520349-520419:-1:exon
so has part: feature:516378-516516:-1:exon
so has part: feature:512436-512629:-1:exon

position:512436:-1
position: 512436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527623-527802:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:520349-520419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:516378-516516:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:512436-512629:-1:exon

TRAPPC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: TRAPPC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trafficking protein particle complex subunit 1
translation: MTIHNLYIFDRGGSCLFYSEWHRRRAPGIPQEEEFKLMFGMLFSLRSFVNKMSPTDMKDGFVSFHTSRYRLHYLETPSGLRLALNTDLGVASARDALQHIYSNLFVELVVKNPLCPPRAPVQSVLFRQRLDAFVRSLPYFGPKNPNS
SIO_010081: TRAPPC1
subclass of: SO_0000673
so part of: TRAPPC1
location: complement(join(512495..512629,516378..516516,520349..520419,527623..527721))
location: region:512495-527721:-1
so has part: feature:527623-527721:-1:exon
so has part: feature:520349-520419:-1:exon
so has part: feature:516378-516516:-1:exon
so has part: feature:512495-512629:-1:exon

XP_032940174.1
type: Protein
SIO_000068: ncbiprotein

position:512495:-1
position: 512495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527721:-1
position: 527721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527623-527721:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:520349-520419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:516378-516516:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:512495-512629:-1:exon

TRAPPC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: TRAPPC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trafficking protein particle complex subunit 1
translation: MTIHNLYIFDRGGSCLFYSEWHRRRAPGIPQEEEFKLMFGMLFSLRSFVNKMSPTDMKDGFVSFHTSRYRLHYLETPSGLRLALNTDLGVASARDALQHIYSNLFVELVVKNPLCPPRAPVQSVLFRQRLDAFVRSLPYFGPKNPNS
SIO_010081: TRAPPC1
subclass of: SO_0000673
so part of: TRAPPC1
location: complement(join(512495..512629,516378..516516,520349..520419,527623..527721))
location: region:512495-527721:-1
so has part: feature:527623-527721:-1:exon
so has part: feature:520349-520419:-1:exon
so has part: feature:516378-516516:-1:exon
so has part: feature:512495-512629:-1:exon

XP_032940175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:527623-527721:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:520349-520419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:516378-516516:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:512495-512629:-1:exon

STAG3
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: STAG3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(529991..538747)
location: region:529991-538747:-1
so has part: feature:529991-538747:-1:exon
subclass of: SO_0000010

117009893
type: Gene
SIO_000068: ncbigene

position:529991:-1
position: 529991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538747:-1
position: 538747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529991-538747:-1:exon

STAG3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: STAG3
product: stromal antigen 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084247.1
SIO_010081: STAG3
subclass of: SO_0000673
so part of: STAG3
location: complement(join(529991..530065,532625..532701,534841..534937,535441..535536,537132..537228,537642..537765,538720..538747))
location: region:529991-538747:-1
so has part: feature:538720-538747:-1:exon
so has part: feature:537642-537765:-1:exon
so has part: feature:537132-537228:-1:exon
so has part: feature:535441-535536:-1:exon
so has part: feature:534841-534937:-1:exon
so has part: feature:532625-532701:-1:exon
so has part: feature:529991-530065:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:538720-538747:-1:exon

position:538720:-1
position: 538720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:537642-537765:-1:exon

position:537642:-1
position: 537642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537765:-1
position: 537765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:537132-537228:-1:exon

position:537132:-1
position: 537132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537228:-1
position: 537228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:535441-535536:-1:exon

position:535441:-1
position: 535441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535536:-1
position: 535536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:534841-534937:-1:exon

position:534841:-1
position: 534841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534937:-1
position: 534937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:532625-532701:-1:exon

position:532625:-1
position: 532625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532701:-1
position: 532701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:529991-530065:-1:exon

position:530065:-1
position: 530065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

STAG3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: STAG3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cohesin subunit SA-3
translation: MRDHAHGAFSMAPRRSPRLHPSGSSSGSSSGPAPGSAAQSNSPSSSQSSELLTDPSSGSDFEASLRPRGKRGPPRGATRSQLPKRSRLSSEDGPDLENNSLFQAVYSGKVAMETVVDEWLEWYRREREAAFVELLNFSVRACGCQGVVTPEMFRELQNSEIIRRLTENFQEDSPLYPLSQRSQPWRRFCSGFCER
SIO_010081: STAG3
subclass of: SO_0000673
so part of: STAG3
location: complement(join(529991..530065,532625..532701,534841..534937,535441..535536,537132..537228,537642..537765,538720..538741))
location: region:529991-538741:-1
so has part: feature:538720-538741:-1:exon
so has part: feature:537642-537765:-1:exon
so has part: feature:537132-537228:-1:exon
so has part: feature:535441-535536:-1:exon
so has part: feature:534841-534937:-1:exon
so has part: feature:532625-532701:-1:exon
so has part: feature:529991-530065:-1:exon

XP_032940138.1
type: Protein
SIO_000068: ncbiprotein

position:538741:-1
position: 538741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538720-538741:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:537642-537765:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537132-537228:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:535441-535536:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:534841-534937:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:532625-532701:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:529991-530065:-1:exon

LOC117009894
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009894
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 542376..545054
location: region:542376-545054:1
so has part: feature:542376-545054:1:exon
subclass of: SO_0000010

117009894
type: Gene
SIO_000068: ncbigene

position:542376:1
position: 542376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545054:1
position: 545054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:542376-545054:1:exon

LOC117009894
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009894
product: galactose-3-O-sulfotransferase 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084248.1
SIO_010081: LOC117009894
subclass of: SO_0000673
so part of: LOC117009894
location: join(542376..542410,542563..542809,544125..545054)
location: region:542376-545054:1
so has part: feature:542376-542410:1:exon
so has part: feature:542563-542809:1:exon
so has part: feature:544125-545054:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:542376-542410:1:exon

position:542410:1
position: 542410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:542563-542809:1:exon

position:542563:1
position: 542563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542809:1
position: 542809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:544125-545054:1:exon

position:544125:1
position: 544125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117009894
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009894
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: galactose-3-O-sulfotransferase 4-like
translation: MGIWGANIAIQSPPSAPPCRPRSHVVFLKTHKTGGSSLVNLLSRYGESRRLRFALPHRYQFGYPAPFRAERVRGFGPGARFDILCHHMRFHLAEVQRVMPNDSFYFSIVRDPGTLGESAFSYFRAAAPAFRNSPSLDAFLASPSRFFRPGIRGNHYARNLQWFDFGLPEPTNPEEIPKILARLERVFPLVLLAESFDESLVLLRHRLCWPRDSVDLFPHNSRGSRQVSPAQIRRLRAWNSLDWALYSHFNRTFWRQAEEFGLERLSREVAEIRRRRRFLAGKCLRGGGPVPAQAIPDGNLRPFQPPGGGKILGFALKEGLGEEERELCGRLAMPELPYKDLLERRQFGAQNGTAR
SIO_010081: LOC117009894
subclass of: SO_0000673
so part of: LOC117009894
location: join(542376..542410,542563..542809,544125..544910)
location: region:542376-544910:1
so has part: feature:542376-542410:1:exon
so has part: feature:542563-542809:1:exon
so has part: feature:544125-544910:1:exon

XP_032940139.1
type: Protein
SIO_000068: ncbiprotein

position:544910:1
position: 544910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:542376-542410:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:542563-542809:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544125-544910:1:exon

TRAPPC14
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: TRAPPC14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 550323..564060
location: region:550323-564060:1
so has part: feature:550323-564060:1:exon
subclass of: SO_0000010

117009918
type: Gene
SIO_000068: ncbigene

position:550323:1
position: 550323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564060:1
position: 564060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550323-564060:1:exon

TRAPPC14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: TRAPPC14
product: trafficking protein particle complex subunit 14, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084280.2
SIO_010081: TRAPPC14
subclass of: SO_0000673
so part of: TRAPPC14
location: join(550323..551486,553146..553241,553908..553948,554032..554042,554080..554157,555141..555227,555809..555929,558120..558267,559355..559437,560643..560803,562111..562238,563128..563309,563776..564060)
location: region:550323-564060:1
so has part: feature:550323-551486:1:exon
so has part: feature:553146-553241:1:exon
so has part: feature:553908-553948:1:exon
so has part: feature:554032-554042:1:exon
so has part: feature:554080-554157:1:exon
so has part: feature:555141-555227:1:exon
so has part: feature:555809-555929:1:exon
so has part: feature:558120-558267:1:exon
so has part: feature:559355-559437:1:exon
so has part: feature:560643-560803:1:exon
so has part: feature:562111-562238:1:exon
so has part: feature:563128-563309:1:exon
so has part: feature:563776-564060:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:550323-551486:1:exon

position:551486:1
position: 551486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:553146-553241:1:exon

position:553146:1
position: 553146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553241:1
position: 553241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:553908-553948:1:exon

position:553908:1
position: 553908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553948:1
position: 553948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:554032-554042:1:exon

position:554032:1
position: 554032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554042:1
position: 554042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:554080-554157:1:exon

position:554080:1
position: 554080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554157:1
position: 554157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:555141-555227:1:exon

position:555141:1
position: 555141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555227:1
position: 555227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:555809-555929:1:exon

position:555809:1
position: 555809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555929:1
position: 555929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:558120-558267:1:exon

position:558120:1
position: 558120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558267:1
position: 558267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:559355-559437:1:exon

position:559355:1
position: 559355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559437:1
position: 559437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:560643-560803:1:exon

position:560643:1
position: 560643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560803:1
position: 560803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:562111-562238:1:exon

position:562111:1
position: 562111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562238:1
position: 562238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:563128-563309:1:exon

position:563128:1
position: 563128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563309:1
position: 563309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:563776-564060:1:exon

position:563776:1
position: 563776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRAPPC14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: TRAPPC14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trafficking protein particle complex subunit 14 isoform X2
translation: MESQCDYSMYFPAVPFPPREFLAGESSGYRSLPRRNHLYLGETVRFLLVLRKNPGSSDRNSGNSERNSGSSDRNSGNAERNAGNADRNAGNAERNAGNAERNAGNAERNAGNAERNAGNAERNAGSSNRNAGNAERNAGNAERNAGIAERNAGIADRNAGNAERNAGSSDRNAANSDGNAENLDKNSLNLDKNLGNLDKNPLSLDRSLGNSDRNAENLDKNLGNSDRNLGNLDRNAGNSDRNLGNSDKNVRNSAVKTPWMQLASSLSALATVTSGDSAGRAREEQEIPGNSSGNSEEPPLFRECRALLTHSRGAPGPAGLPVDDPIVSQDEVIFPLTVALDRLPPGTAKAKIVVTVWQRDTEPPEARTGGYLRLLQGRAPGQVFRQQHGAFKAQVSTLLTVLPPPRVRCRQVTVSGKYLTVLKVLNGSSQEELSLWDVQILPNFNASYLPVMPDGSVLLVDDVCHHSGEVPVGAFCRVPGCHSRWPCPLSALEEQNFLFQLQAPERPPRDAKEGLEVPLVAVVRWSTPKLPFTDSIVTHYRLPSIRLERPRFVMTATCESPVVALQRFTVTYTLLNDLQDFLAVRLVWTPEATAGKARGALDSVVCHTPLTNLGYSRKGSARTFRVAFQALRAGLFELSQHMKLKLQFTASVTSAPPEARPVSRKSSPSSPAVRELVAGLGRSQSFSHQQPARSHLMRSGSVMERRAITPPVGSPVGRPLYLPAGDKAVLALDKIAKRECKVLVVPPVK
SIO_010081: TRAPPC14
subclass of: SO_0000673
so part of: TRAPPC14
location: join(550530..551486,553146..553241,553908..553948,554032..554042,554080..554157,555141..555227,555809..555929,558120..558267,559355..559437,560643..560803,562111..562238,563128..563309,563776..563932)
location: region:550530-563932:1
so has part: feature:550530-551486:1:exon
so has part: feature:553146-553241:1:exon
so has part: feature:553908-553948:1:exon
so has part: feature:554032-554042:1:exon
so has part: feature:554080-554157:1:exon
so has part: feature:555141-555227:1:exon
so has part: feature:555809-555929:1:exon
so has part: feature:558120-558267:1:exon
so has part: feature:559355-559437:1:exon
so has part: feature:560643-560803:1:exon
so has part: feature:562111-562238:1:exon
so has part: feature:563128-563309:1:exon
so has part: feature:563776-563932:1:exon

XP_032940171.1
type: Protein
SIO_000068: ncbiprotein

position:550530:1
position: 550530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563932:1
position: 563932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550530-551486:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:553146-553241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:553908-553948:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:554032-554042:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:554080-554157:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:555141-555227:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:555809-555929:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:558120-558267:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:559355-559437:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:560643-560803:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:562111-562238:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:563128-563309:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:563776-563932:1:exon

TRAPPC14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: TRAPPC14
product: trafficking protein particle complex subunit 14, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_033084276.2
SIO_010081: TRAPPC14
subclass of: SO_0000673
so part of: TRAPPC14
location: join(554230..554300,555141..555227,555809..555929,558120..558267,559355..559437,560643..560803,562111..562238,563128..563309,563776..564050)
location: region:554230-564050:1
so has part: feature:554230-554300:1:exon
so has part: feature:555141-555227:1:exon
so has part: feature:555809-555929:1:exon
so has part: feature:558120-558267:1:exon
so has part: feature:559355-559437:1:exon
so has part: feature:560643-560803:1:exon
so has part: feature:562111-562238:1:exon
so has part: feature:563128-563309:1:exon
so has part: feature:563776-564050:1:exon

position:554230:1
position: 554230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564050:1
position: 564050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554230-554300:1:exon

position:554300:1
position: 554300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:555141-555227:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555809-555929:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:558120-558267:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:559355-559437:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:560643-560803:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:562111-562238:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:563128-563309:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:563776-564050:1:exon

TRAPPC14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: TRAPPC14
product: trafficking protein particle complex subunit 14, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_033084278.1
SIO_010081: TRAPPC14
subclass of: SO_0000673
so part of: TRAPPC14
location: join(554421..554434,555141..555227,555809..555929,558120..558267,559355..559437,560643..560803,562111..562238,563128..563309,563776..564050)
location: region:554421-564050:1
so has part: feature:554421-554434:1:exon
so has part: feature:555141-555227:1:exon
so has part: feature:555809-555929:1:exon
so has part: feature:558120-558267:1:exon
so has part: feature:559355-559437:1:exon
so has part: feature:560643-560803:1:exon
so has part: feature:562111-562238:1:exon
so has part: feature:563128-563309:1:exon
so has part: feature:563776-564050:1:exon

position:554421:1
position: 554421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554421-554434:1:exon

position:554434:1
position: 554434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:555141-555227:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555809-555929:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:558120-558267:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:559355-559437:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:560643-560803:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:562111-562238:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:563128-563309:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:563776-564050:1:exon

TRAPPC14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: TRAPPC14
product: trafficking protein particle complex subunit 14, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033084277.1
SIO_010081: TRAPPC14
subclass of: SO_0000673
so part of: TRAPPC14
location: join(554576..554591,555141..555227,555809..555929,558120..558267,559355..559437,560643..560803,562111..562238,563128..563309,563776..564050)
location: region:554576-564050:1
so has part: feature:554576-554591:1:exon
so has part: feature:555141-555227:1:exon
so has part: feature:555809-555929:1:exon
so has part: feature:558120-558267:1:exon
so has part: feature:559355-559437:1:exon
so has part: feature:560643-560803:1:exon
so has part: feature:562111-562238:1:exon
so has part: feature:563128-563309:1:exon
so has part: feature:563776-564050:1:exon

position:554576:1
position: 554576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554576-554591:1:exon

position:554591:1
position: 554591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:555141-555227:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555809-555929:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:558120-558267:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:559355-559437:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:560643-560803:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:562111-562238:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:563128-563309:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:563776-564050:1:exon

TRAPPC14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: TRAPPC14
product: trafficking protein particle complex subunit 14, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_033084279.1
SIO_010081: TRAPPC14
subclass of: SO_0000673
so part of: TRAPPC14
location: join(554741..554749,555141..555227,555809..555929,558120..558267,559355..559437,560643..560803,562111..562238,563128..563309,563776..564050)
location: region:554741-564050:1
so has part: feature:554741-554749:1:exon
so has part: feature:555141-555227:1:exon
so has part: feature:555809-555929:1:exon
so has part: feature:558120-558267:1:exon
so has part: feature:559355-559437:1:exon
so has part: feature:560643-560803:1:exon
so has part: feature:562111-562238:1:exon
so has part: feature:563128-563309:1:exon
so has part: feature:563776-564050:1:exon

position:554741:1
position: 554741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554741-554749:1:exon

position:554749:1
position: 554749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:555141-555227:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555809-555929:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:558120-558267:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:559355-559437:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:560643-560803:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:562111-562238:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:563128-563309:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:563776-564050:1:exon

TRAPPC14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: TRAPPC14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trafficking protein particle complex subunit 14 isoform X1
translation: MPDGSVLLVDDVCHHSGEVPVGAFCRVPGCHSRWPCPLSALEEQNFLFQLQAPERPPRDAKEGLEVPLVAVVRWSTPKLPFTDSIVTHYRLPSIRLERPRFVMTATCESPVVALQRFTVTYTLLNDLQDFLAVRLVWTPEATAGKARGALDSVVCHTPLTNLGYSRKGSARTFRVAFQALRAGLFELSQHMKLKLQFTASVTSAPPEARPVSRKSSPSSPAVRELVAGLGRSQSFSHQQPARSHLMRSGSVMERRAITPPVGSPVGRPLYLPAGDKAVLALDKIAKRECKVLVVPPVK
SIO_010081: TRAPPC14
subclass of: SO_0000673
so part of: TRAPPC14
location: join(555892..555929,558120..558267,559355..559437,560643..560803,562111..562238,563128..563309,563776..563932)
location: region:555892-563932:1
so has part: feature:555892-555929:1:exon
so has part: feature:558120-558267:1:exon
so has part: feature:559355-559437:1:exon
so has part: feature:560643-560803:1:exon
so has part: feature:562111-562238:1:exon
so has part: feature:563128-563309:1:exon
so has part: feature:563776-563932:1:exon

XP_032940167.1
type: Protein
SIO_000068: ncbiprotein

position:555892:1
position: 555892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555892-555929:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:558120-558267:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:559355-559437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560643-560803:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:562111-562238:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:563128-563309:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:563776-563932:1:exon

TRAPPC14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: TRAPPC14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trafficking protein particle complex subunit 14 isoform X1
translation: MPDGSVLLVDDVCHHSGEVPVGAFCRVPGCHSRWPCPLSALEEQNFLFQLQAPERPPRDAKEGLEVPLVAVVRWSTPKLPFTDSIVTHYRLPSIRLERPRFVMTATCESPVVALQRFTVTYTLLNDLQDFLAVRLVWTPEATAGKARGALDSVVCHTPLTNLGYSRKGSARTFRVAFQALRAGLFELSQHMKLKLQFTASVTSAPPEARPVSRKSSPSSPAVRELVAGLGRSQSFSHQQPARSHLMRSGSVMERRAITPPVGSPVGRPLYLPAGDKAVLALDKIAKRECKVLVVPPVK
SIO_010081: TRAPPC14
subclass of: SO_0000673
so part of: TRAPPC14
location: join(555892..555929,558120..558267,559355..559437,560643..560803,562111..562238,563128..563309,563776..563932)
location: region:555892-563932:1
so has part: feature:555892-555929:1:exon
so has part: feature:558120-558267:1:exon
so has part: feature:559355-559437:1:exon
so has part: feature:560643-560803:1:exon
so has part: feature:562111-562238:1:exon
so has part: feature:563128-563309:1:exon
so has part: feature:563776-563932:1:exon

XP_032940168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:555892-555929:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:558120-558267:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:559355-559437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560643-560803:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:562111-562238:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:563128-563309:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:563776-563932:1:exon

TRAPPC14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: TRAPPC14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trafficking protein particle complex subunit 14 isoform X1
translation: MPDGSVLLVDDVCHHSGEVPVGAFCRVPGCHSRWPCPLSALEEQNFLFQLQAPERPPRDAKEGLEVPLVAVVRWSTPKLPFTDSIVTHYRLPSIRLERPRFVMTATCESPVVALQRFTVTYTLLNDLQDFLAVRLVWTPEATAGKARGALDSVVCHTPLTNLGYSRKGSARTFRVAFQALRAGLFELSQHMKLKLQFTASVTSAPPEARPVSRKSSPSSPAVRELVAGLGRSQSFSHQQPARSHLMRSGSVMERRAITPPVGSPVGRPLYLPAGDKAVLALDKIAKRECKVLVVPPVK
SIO_010081: TRAPPC14
subclass of: SO_0000673
so part of: TRAPPC14
location: join(555892..555929,558120..558267,559355..559437,560643..560803,562111..562238,563128..563309,563776..563932)
location: region:555892-563932:1
so has part: feature:555892-555929:1:exon
so has part: feature:558120-558267:1:exon
so has part: feature:559355-559437:1:exon
so has part: feature:560643-560803:1:exon
so has part: feature:562111-562238:1:exon
so has part: feature:563128-563309:1:exon
so has part: feature:563776-563932:1:exon

XP_032940169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:555892-555929:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:558120-558267:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:559355-559437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560643-560803:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:562111-562238:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:563128-563309:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:563776-563932:1:exon

TRAPPC14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: TRAPPC14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trafficking protein particle complex subunit 14 isoform X1
translation: MPDGSVLLVDDVCHHSGEVPVGAFCRVPGCHSRWPCPLSALEEQNFLFQLQAPERPPRDAKEGLEVPLVAVVRWSTPKLPFTDSIVTHYRLPSIRLERPRFVMTATCESPVVALQRFTVTYTLLNDLQDFLAVRLVWTPEATAGKARGALDSVVCHTPLTNLGYSRKGSARTFRVAFQALRAGLFELSQHMKLKLQFTASVTSAPPEARPVSRKSSPSSPAVRELVAGLGRSQSFSHQQPARSHLMRSGSVMERRAITPPVGSPVGRPLYLPAGDKAVLALDKIAKRECKVLVVPPVK
SIO_010081: TRAPPC14
subclass of: SO_0000673
so part of: TRAPPC14
location: join(555892..555929,558120..558267,559355..559437,560643..560803,562111..562238,563128..563309,563776..563932)
location: region:555892-563932:1
so has part: feature:555892-555929:1:exon
so has part: feature:558120-558267:1:exon
so has part: feature:559355-559437:1:exon
so has part: feature:560643-560803:1:exon
so has part: feature:562111-562238:1:exon
so has part: feature:563128-563309:1:exon
so has part: feature:563776-563932:1:exon

XP_032940170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:555892-555929:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:558120-558267:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:559355-559437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560643-560803:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:562111-562238:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:563128-563309:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:563776-563932:1:exon

LAMTOR4
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LAMTOR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(564812..567399)
location: region:564812-567399:-1
so has part: feature:564812-567399:-1:exon
subclass of: SO_0000010

117009923
type: Gene
SIO_000068: ncbigene

position:564812:-1
position: 564812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567399:-1
position: 567399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:564812-567399:-1:exon

LAMTOR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LAMTOR4
product: late endosomal/lysosomal adaptor, MAPK and MTOR activator 4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084285.1
SIO_010081: LAMTOR4
subclass of: SO_0000673
so part of: LAMTOR4
location: complement(join(564812..565036,565890..566007,566917..566997,567293..567399))
location: region:564812-567399:-1
so has part: feature:567293-567399:-1:exon
so has part: feature:566917-566997:-1:exon
so has part: feature:565890-566007:-1:exon
so has part: feature:564812-565036:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:567293-567399:-1:exon

position:567293:-1
position: 567293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:566917-566997:-1:exon

position:566917:-1
position: 566917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:566997:-1
position: 566997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:565890-566007:-1:exon

position:565890:-1
position: 565890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:566007:-1
position: 566007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:564812-565036:-1:exon

position:565036:-1
position: 565036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LAMTOR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LAMTOR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ragulator complex protein LAMTOR4
translation: MTSALTQGLERVPAQAGYLVISDGAVLASSGDLENDEHTATVLQGLVATALGLRLPRGHEPPFRRLSVVFGEHSLLVTVSGQKLFVVKRHHHVQEPVAV
SIO_010081: LAMTOR4
subclass of: SO_0000673
so part of: LAMTOR4
location: complement(join(564939..565036,565890..566007,566917..566997,567293..567295))
location: region:564939-567295:-1
so has part: feature:567293-567295:-1:exon
so has part: feature:566917-566997:-1:exon
so has part: feature:565890-566007:-1:exon
so has part: feature:564939-565036:-1:exon

XP_032940176.1
type: Protein
SIO_000068: ncbiprotein

position:564939:-1
position: 564939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567295:-1
position: 567295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:567293-567295:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:566917-566997:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:565890-566007:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:564939-565036:-1:exon

CHD3
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: CHD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(568482..628205)
location: region:568482-628205:-1
so has part: feature:568482-628205:-1:exon
subclass of: SO_0000010

117009917
type: Gene
SIO_000068: ncbigene

position:568482:-1
position: 568482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:628205:-1
position: 628205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:568482-628205:-1:exon

CHD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CHD3
product: chromodomain helicase DNA binding protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033084274.1
SIO_010081: CHD3
subclass of: SO_0000673
so part of: CHD3
location: complement(join(568482..568621,569270..569399,570621..570784,572404..572599,574886..575018,576287..576395,576537..576565,577806..577890,578026..578124,579544..579679,580531..580643,581332..581494,583498..583642,586417..586550,587287..587372,587485..587550,589089..589266,591395..591561,592724..592955,594530..594654,595904..596021,596831..596962,598069..598210,598295..598468,599792..599913,601634..601771,602730..602930,605072..605263,605997..606096,607031..607162,609658..609872,611715..611912,613562..613792,614360..614538,615705..615840,617194..617324,618082..618320,620407..620531,621031..621219,623221..623339,628131..628205))
location: region:568482-628205:-1
so has part: feature:628131-628205:-1:exon
so has part: feature:623221-623339:-1:exon
so has part: feature:621031-621219:-1:exon
so has part: feature:620407-620531:-1:exon
so has part: feature:618082-618320:-1:exon
so has part: feature:617194-617324:-1:exon
so has part: feature:615705-615840:-1:exon
so has part: feature:614360-614538:-1:exon
so has part: feature:613562-613792:-1:exon
so has part: feature:611715-611912:-1:exon
so has part: feature:609658-609872:-1:exon
so has part: feature:607031-607162:-1:exon
so has part: feature:605997-606096:-1:exon
so has part: feature:605072-605263:-1:exon
so has part: feature:602730-602930:-1:exon
so has part: feature:601634-601771:-1:exon
so has part: feature:599792-599913:-1:exon
so has part: feature:598295-598468:-1:exon
so has part: feature:598069-598210:-1:exon
so has part: feature:596831-596962:-1:exon
so has part: feature:595904-596021:-1:exon
so has part: feature:594530-594654:-1:exon
so has part: feature:592724-592955:-1:exon
so has part: feature:591395-591561:-1:exon
so has part: feature:589089-589266:-1:exon
so has part: feature:587485-587550:-1:exon
so has part: feature:587287-587372:-1:exon
so has part: feature:586417-586550:-1:exon
so has part: feature:583498-583642:-1:exon
so has part: feature:581332-581494:-1:exon
so has part: feature:580531-580643:-1:exon
so has part: feature:579544-579679:-1:exon
so has part: feature:578026-578124:-1:exon
so has part: feature:577806-577890:-1:exon
so has part: feature:576537-576565:-1:exon
so has part: feature:576287-576395:-1:exon
so has part: feature:574886-575018:-1:exon
so has part: feature:572404-572599:-1:exon
so has part: feature:570621-570784:-1:exon
so has part: feature:569270-569399:-1:exon
so has part: feature:568482-568621:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:628131-628205:-1:exon

position:628131:-1
position: 628131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:623221-623339:-1:exon

position:623221:-1
position: 623221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623339:-1
position: 623339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:621031-621219:-1:exon

position:621031:-1
position: 621031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621219:-1
position: 621219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:620407-620531:-1:exon

position:620407:-1
position: 620407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620531:-1
position: 620531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:618082-618320:-1:exon

position:618082:-1
position: 618082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618320:-1
position: 618320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:617194-617324:-1:exon

position:617194:-1
position: 617194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617324:-1
position: 617324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:615705-615840:-1:exon

position:615705:-1
position: 615705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615840:-1
position: 615840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:614360-614538:-1:exon

position:614360:-1
position: 614360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614538:-1
position: 614538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:613562-613792:-1:exon

position:613562:-1
position: 613562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:613792:-1
position: 613792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:611715-611912:-1:exon

position:611715:-1
position: 611715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611912:-1
position: 611912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:609658-609872:-1:exon

position:609658:-1
position: 609658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609872:-1
position: 609872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:607031-607162:-1:exon

position:607031:-1
position: 607031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607162:-1
position: 607162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:605997-606096:-1:exon

position:605997:-1
position: 605997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606096:-1
position: 606096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:605072-605263:-1:exon

position:605072:-1
position: 605072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605263:-1
position: 605263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:602730-602930:-1:exon

position:602730:-1
position: 602730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602930:-1
position: 602930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:601634-601771:-1:exon

position:601634:-1
position: 601634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601771:-1
position: 601771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:599792-599913:-1:exon

position:599792:-1
position: 599792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599913:-1
position: 599913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:598295-598468:-1:exon

position:598295:-1
position: 598295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598468:-1
position: 598468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:598069-598210:-1:exon

position:598069:-1
position: 598069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598210:-1
position: 598210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:596831-596962:-1:exon

position:596831:-1
position: 596831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596962:-1
position: 596962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:595904-596021:-1:exon

position:595904:-1
position: 595904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596021:-1
position: 596021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:594530-594654:-1:exon

position:594530:-1
position: 594530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594654:-1
position: 594654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:592724-592955:-1:exon

position:592724:-1
position: 592724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592955:-1
position: 592955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:591395-591561:-1:exon

position:591395:-1
position: 591395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591561:-1
position: 591561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:589089-589266:-1:exon

position:589089:-1
position: 589089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589266:-1
position: 589266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:587485-587550:-1:exon

position:587485:-1
position: 587485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587550:-1
position: 587550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:587287-587372:-1:exon

position:587287:-1
position: 587287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587372:-1
position: 587372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:586417-586550:-1:exon

position:586417:-1
position: 586417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586550:-1
position: 586550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:583498-583642:-1:exon

position:583498:-1
position: 583498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583642:-1
position: 583642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:581332-581494:-1:exon

position:581332:-1
position: 581332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581494:-1
position: 581494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:580531-580643:-1:exon

position:580531:-1
position: 580531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580643:-1
position: 580643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:579544-579679:-1:exon

position:579544:-1
position: 579544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579679:-1
position: 579679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:578026-578124:-1:exon

position:578026:-1
position: 578026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578124:-1
position: 578124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:577806-577890:-1:exon

position:577806:-1
position: 577806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577890:-1
position: 577890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:576537-576565:-1:exon

position:576537:-1
position: 576537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576565:-1
position: 576565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:576287-576395:-1:exon

position:576287:-1
position: 576287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576395:-1
position: 576395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:574886-575018:-1:exon

position:574886:-1
position: 574886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575018:-1
position: 575018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:572404-572599:-1:exon

position:572404:-1
position: 572404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572599:-1
position: 572599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:570621-570784:-1:exon

position:570621:-1
position: 570621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:570784:-1
position: 570784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:569270-569399:-1:exon

position:569270:-1
position: 569270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569399:-1
position: 569399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:568482-568621:-1:exon

position:568621:-1
position: 568621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CHD3
product: chromodomain helicase DNA binding protein 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033084275.1
SIO_010081: CHD3
subclass of: SO_0000673
so part of: CHD3
location: complement(join(568482..568618,569270..569399,570621..570784,572404..572599,574886..575018,576287..576395,577777..577890,578026..578124,579544..579679,580531..580643,581332..581494,583498..583642,586417..586550,587287..587372,587485..587550,589089..589266,591395..591561,592724..592955,594530..594654,595904..596021,596831..596962,598069..598210,598295..598468,599792..599913,601634..601771,602730..602930,605072..605263,605997..606096,607031..607162,609658..609872,611715..611912,613562..613792,614360..614538,615705..615840,617194..617324,618082..618320,620407..620531,621031..621219,623221..623339,628131..628205))
location: region:568482-628205:-1
so has part: feature:628131-628205:-1:exon
so has part: feature:623221-623339:-1:exon
so has part: feature:621031-621219:-1:exon
so has part: feature:620407-620531:-1:exon
so has part: feature:618082-618320:-1:exon
so has part: feature:617194-617324:-1:exon
so has part: feature:615705-615840:-1:exon
so has part: feature:614360-614538:-1:exon
so has part: feature:613562-613792:-1:exon
so has part: feature:611715-611912:-1:exon
so has part: feature:609658-609872:-1:exon
so has part: feature:607031-607162:-1:exon
so has part: feature:605997-606096:-1:exon
so has part: feature:605072-605263:-1:exon
so has part: feature:602730-602930:-1:exon
so has part: feature:601634-601771:-1:exon
so has part: feature:599792-599913:-1:exon
so has part: feature:598295-598468:-1:exon
so has part: feature:598069-598210:-1:exon
so has part: feature:596831-596962:-1:exon
so has part: feature:595904-596021:-1:exon
so has part: feature:594530-594654:-1:exon
so has part: feature:592724-592955:-1:exon
so has part: feature:591395-591561:-1:exon
so has part: feature:589089-589266:-1:exon
so has part: feature:587485-587550:-1:exon
so has part: feature:587287-587372:-1:exon
so has part: feature:586417-586550:-1:exon
so has part: feature:583498-583642:-1:exon
so has part: feature:581332-581494:-1:exon
so has part: feature:580531-580643:-1:exon
so has part: feature:579544-579679:-1:exon
so has part: feature:578026-578124:-1:exon
so has part: feature:577777-577890:-1:exon
so has part: feature:576287-576395:-1:exon
so has part: feature:574886-575018:-1:exon
so has part: feature:572404-572599:-1:exon
so has part: feature:570621-570784:-1:exon
so has part: feature:569270-569399:-1:exon
so has part: feature:568482-568618:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:628131-628205:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623221-623339:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:621031-621219:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:620407-620531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:618082-618320:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:617194-617324:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:615705-615840:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:614360-614538:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:613562-613792:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:611715-611912:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:609658-609872:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:607031-607162:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:605997-606096:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:605072-605263:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:602730-602930:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:601634-601771:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:599792-599913:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:598295-598468:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:598069-598210:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:596831-596962:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:595904-596021:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:594530-594654:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:592724-592955:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:591395-591561:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:589089-589266:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:587485-587550:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:587287-587372:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:586417-586550:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:583498-583642:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:581332-581494:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:580531-580643:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:579544-579679:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:578026-578124:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:577777-577890:-1:exon

position:577777:-1
position: 577777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:576287-576395:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:574886-575018:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:572404-572599:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:570621-570784:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:569270-569399:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:568482-568618:-1:exon

position:568618:-1
position: 568618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CHD3
product: chromodomain helicase DNA binding protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033084273.1
SIO_010081: CHD3
subclass of: SO_0000673
so part of: CHD3
location: complement(join(568482..568621,569270..569399,570621..570784,572404..572599,574886..575018,576287..576395,577777..577890,578026..578124,579544..579679,580531..580643,581332..581494,583498..583642,586417..586550,587287..587372,587485..587550,589089..589266,591395..591561,592724..592955,594530..594654,595904..596021,596831..596962,598069..598210,598295..598468,599792..599913,601634..601771,602730..602930,605072..605263,605997..606096,607031..607162,609658..609872,611715..611912,613562..613792,614360..614538,615705..615840,617194..617324,618082..618320,620407..620531,621031..621219,623221..623339,628131..628205))
location: region:568482-628205:-1
so has part: feature:628131-628205:-1:exon
so has part: feature:623221-623339:-1:exon
so has part: feature:621031-621219:-1:exon
so has part: feature:620407-620531:-1:exon
so has part: feature:618082-618320:-1:exon
so has part: feature:617194-617324:-1:exon
so has part: feature:615705-615840:-1:exon
so has part: feature:614360-614538:-1:exon
so has part: feature:613562-613792:-1:exon
so has part: feature:611715-611912:-1:exon
so has part: feature:609658-609872:-1:exon
so has part: feature:607031-607162:-1:exon
so has part: feature:605997-606096:-1:exon
so has part: feature:605072-605263:-1:exon
so has part: feature:602730-602930:-1:exon
so has part: feature:601634-601771:-1:exon
so has part: feature:599792-599913:-1:exon
so has part: feature:598295-598468:-1:exon
so has part: feature:598069-598210:-1:exon
so has part: feature:596831-596962:-1:exon
so has part: feature:595904-596021:-1:exon
so has part: feature:594530-594654:-1:exon
so has part: feature:592724-592955:-1:exon
so has part: feature:591395-591561:-1:exon
so has part: feature:589089-589266:-1:exon
so has part: feature:587485-587550:-1:exon
so has part: feature:587287-587372:-1:exon
so has part: feature:586417-586550:-1:exon
so has part: feature:583498-583642:-1:exon
so has part: feature:581332-581494:-1:exon
so has part: feature:580531-580643:-1:exon
so has part: feature:579544-579679:-1:exon
so has part: feature:578026-578124:-1:exon
so has part: feature:577777-577890:-1:exon
so has part: feature:576287-576395:-1:exon
so has part: feature:574886-575018:-1:exon
so has part: feature:572404-572599:-1:exon
so has part: feature:570621-570784:-1:exon
so has part: feature:569270-569399:-1:exon
so has part: feature:568482-568621:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:628131-628205:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623221-623339:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:621031-621219:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:620407-620531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:618082-618320:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:617194-617324:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:615705-615840:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:614360-614538:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:613562-613792:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:611715-611912:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:609658-609872:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:607031-607162:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:605997-606096:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:605072-605263:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:602730-602930:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:601634-601771:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:599792-599913:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:598295-598468:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:598069-598210:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:596831-596962:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:595904-596021:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:594530-594654:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:592724-592955:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:591395-591561:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:589089-589266:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:587485-587550:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:587287-587372:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:586417-586550:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:583498-583642:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:581332-581494:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:580531-580643:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:579544-579679:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:578026-578124:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:577777-577890:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:576287-576395:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:574886-575018:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:572404-572599:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:570621-570784:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:569270-569399:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:568482-568621:-1:exon

CHD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CHD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 3 isoform X2
translation: MAGALPGSGRVSPAAPPDGDEELLRGLEGALGVKKKKRGPRKQKENKPGKPRKRKKLVSEDELESERDEYPREEYREKSESGGSDSGGAARKRRRKHREKKEKKTKRRKKADDEGGQKVKAVEQKSSAQLLGAWGLEDVDHVFTEEDYHTLTNYKAFSQFMRPLIAKKNPKIPMSKMMTILGAKWREFSANNPFKGSAAAVAAAAAAAAAAVAEQVSAAVAAVAPEAPPPPLRKAKTKEGKGPGHKKRSKSPRVPELKRKMKGRKMAPLKIKLGVLGGKRKKSSSSEDAGEAEEESDAESPGVLGAAPRPDPTTRLKKLKRGRPGRKKKKGPGPEEEGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGRWSCPHCEKEGVQWEAKEEEEEEEEEEEEGEKEEEDDHMEYCRVCKDGGELLCCDACVSSYHIHCLNPPLPEVPNGEWLCPRCTCPVLKGRVQKILYWRWGEPPAPVAPPGTPQAQEGPPQALQGRSEREFFVKWVGLSYWHCSWIKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGDDDPKSEKRGAGGDPLFGGMEERFYRYGIKPEWMTVHRIINHSVDRKGQYHYLVKWRDLPYDQATWEEDEMPIPDYDLHKLAYWKHREVFMGEDPAQPRRYKKKKKETPGEGPPESPTNDPTVKYETQPRFITATGGTLHLYQLEGLNWLRFSWAQSTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPAFYVVTYTGDKDSRAIIRENEFSFDDNAMKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIEHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKASGKLLLLQKMLRKLKEQNHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVVIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKDENEGDNKEEDSSVIHYDNEAIARLLDRNQDATDDADVQNMNEYLSSFKVAQYVVREEDKIEEIEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRVRKQVNYNDAAQEDQDNQSEYSVGSEEEDEDFDERPEGRRQSKRQLRNEKDKPLPPLLARVGGNIEVLGFNTRQRKAFLNAVMRWGMPPQDAFTSQWLVRDLRGKTEKEFKAYVSLFMRHLCEPGADGSETFADGVPREGLSRQQVLTRIGVMSLVKKKVQEFEHINGRWSLPELAPEPSADSKRSSRASSPAKTGPPSPEQSGPPSPEPPTPATPAPSERGDGPGPPPDREDGDTRDEKEPKGPEKMETDAPVPEVPLSPGDGSEAEGPRKGDEEEGPGHRDPEAEGTPAREERPGAEAEKGPGGDKGDEKTPEEEPKERPGDPDPKREEAKAEKEPRPDPRPNGRRDERAEKPRFMFNIADGGFTELHTLWQNEERAAISSGKLNEIWHRRHDYWLLAGIVLHGYARWTDIQNDGAFGVINEPFKGEASKGNFLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPSHPAMALNTRFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPATLSRIPPIAARLQMSERSILSRLASKGTESHPPPTFPPGPYATPPSYGGTFGTPPAGALPPPGGANYSQMPPGSFISAANGPPVLVKREREAEALEKKEPRGGEVICIDD
SIO_010081: CHD3
subclass of: SO_0000673
so part of: CHD3
location: complement(join(568521..568621,569270..569399,570621..570784,572404..572599,574886..575018,576287..576395,576537..576565,577806..577890,578026..578124,579544..579679,580531..580643,581332..581494,583498..583642,586417..586550,587287..587372,587485..587550,589089..589266,591395..591561,592724..592955,594530..594654,595904..596021,596831..596962,598069..598210,598295..598468,599792..599913,601634..601771,602730..602930,605072..605263,605997..606096,607031..607162,609658..609872,611715..611912,613562..613792,614360..614538,615705..615840,617194..617324,618082..618320,620407..620531,621031..621219,623221..623339,628131..628182))
location: region:568521-628182:-1
so has part: feature:628131-628182:-1:exon
so has part: feature:623221-623339:-1:exon
so has part: feature:621031-621219:-1:exon
so has part: feature:620407-620531:-1:exon
so has part: feature:618082-618320:-1:exon
so has part: feature:617194-617324:-1:exon
so has part: feature:615705-615840:-1:exon
so has part: feature:614360-614538:-1:exon
so has part: feature:613562-613792:-1:exon
so has part: feature:611715-611912:-1:exon
so has part: feature:609658-609872:-1:exon
so has part: feature:607031-607162:-1:exon
so has part: feature:605997-606096:-1:exon
so has part: feature:605072-605263:-1:exon
so has part: feature:602730-602930:-1:exon
so has part: feature:601634-601771:-1:exon
so has part: feature:599792-599913:-1:exon
so has part: feature:598295-598468:-1:exon
so has part: feature:598069-598210:-1:exon
so has part: feature:596831-596962:-1:exon
so has part: feature:595904-596021:-1:exon
so has part: feature:594530-594654:-1:exon
so has part: feature:592724-592955:-1:exon
so has part: feature:591395-591561:-1:exon
so has part: feature:589089-589266:-1:exon
so has part: feature:587485-587550:-1:exon
so has part: feature:587287-587372:-1:exon
so has part: feature:586417-586550:-1:exon
so has part: feature:583498-583642:-1:exon
so has part: feature:581332-581494:-1:exon
so has part: feature:580531-580643:-1:exon
so has part: feature:579544-579679:-1:exon
so has part: feature:578026-578124:-1:exon
so has part: feature:577806-577890:-1:exon
so has part: feature:576537-576565:-1:exon
so has part: feature:576287-576395:-1:exon
so has part: feature:574886-575018:-1:exon
so has part: feature:572404-572599:-1:exon
so has part: feature:570621-570784:-1:exon
so has part: feature:569270-569399:-1:exon
so has part: feature:568521-568621:-1:exon

XP_032940165.1
type: Protein
SIO_000068: ncbiprotein

position:568521:-1
position: 568521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:628182:-1
position: 628182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:628131-628182:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623221-623339:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:621031-621219:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:620407-620531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:618082-618320:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:617194-617324:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:615705-615840:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:614360-614538:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:613562-613792:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:611715-611912:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:609658-609872:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:607031-607162:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:605997-606096:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:605072-605263:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:602730-602930:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:601634-601771:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:599792-599913:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:598295-598468:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:598069-598210:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:596831-596962:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:595904-596021:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:594530-594654:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:592724-592955:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:591395-591561:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:589089-589266:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:587485-587550:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:587287-587372:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:586417-586550:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:583498-583642:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:581332-581494:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:580531-580643:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:579544-579679:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:578026-578124:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:577806-577890:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:576537-576565:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:576287-576395:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:574886-575018:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:572404-572599:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:570621-570784:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:569270-569399:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:568521-568621:-1:exon

CHD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CHD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 3 isoform X3
translation: MAGALPGSGRVSPAAPPDGDEELLRGLEGALGVKKKKRGPRKQKENKPGKPRKRKKLVSEDELESERDEYPREEYREKSESGGSDSGGAARKRRRKHREKKEKKTKRRKKADDEGGQKVKAVEQKSSAQLLGAWGLEDVDHVFTEEDYHTLTNYKAFSQFMRPLIAKKNPKIPMSKMMTILGAKWREFSANNPFKGSAAAVAAAAAAAAAAVAEQVSAAVAAVAPEAPPPPLRKAKTKEGKGPGHKKRSKSPRVPELKRKMKGRKMAPLKIKLGVLGGKRKKSSSSEDAGEAEEESDAESPGVLGAAPRPDPTTRLKKLKRGRPGRKKKKGPGPEEEGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGRWSCPHCEKEGVQWEAKEEEEEEEEEEEEGEKEEEDDHMEYCRVCKDGGELLCCDACVSSYHIHCLNPPLPEVPNGEWLCPRCTCPVLKGRVQKILYWRWGEPPAPVAPPGTPQAQEGPPQALQGRSEREFFVKWVGLSYWHCSWIKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGDDDPKSEKRGAGGDPLFGGMEERFYRYGIKPEWMTVHRIINHSVDRKGQYHYLVKWRDLPYDQATWEEDEMPIPDYDLHKLAYWKHREVFMGEDPAQPRRYKKKKKETPGEGPPESPTNDPTVKYETQPRFITATGGTLHLYQLEGLNWLRFSWAQSTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPAFYVVTYTGDKDSRAIIRENEFSFDDNAMKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIEHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKASGKLLLLQKMLRKLKEQNHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVVIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKDENEGDNKEEDSSVIHYDNEAIARLLDRNQDATDDADVQNMNEYLSSFKVAQYVVREEDKIEEIEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRVRKQVNYNDAAQEDQDNQSEYSVGSEEEDEDFDERPEGRRQSKRQLRNEKDKPLPPLLARVGGNIEVLGFNTRQRKAFLNAVMRWGMPPQDAFTSQWLVRDLRGKTEKEFKAYVSLFMRHLCEPGADGSETFADGVPREGLSRQQVLTRIGVMSLVKKKVQEFEHINGRWSLPELAPEPSADSKRSSRASSPAKTGPPSPEQSGPPSPEPPTPATPAPSERGDGPGPPPDREDGDTRDEKEPKGPEKMETDAPVPEVPLSPGDGSEAEGPRKGDEEEGPGHRDPEAEGTPAREERPGAEAEKGPGGDKGDEKTPEEEPKERPGDPDPKREEAKAEKEPRPDPRPNGRRDERAEKPRFMFNIADGGFTELHTLWQNEERAAISSGKLNEIWHRRHDYWLLAGIVLHGYARWTDIQNDGAFGVINEPFKGEASKGNFLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPSHPAMALNTRFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPATLSRIPPIAARLQMSERSILSRLASKGTESHPPPTFPPGPYATPPSYGGTFGTPPAGALPPPGGANYSQMPPGSFISANGPPVLVKREREAEALEKKEPRGGEVICIDD
SIO_010081: CHD3
subclass of: SO_0000673
so part of: CHD3
location: complement(join(568521..568618,569270..569399,570621..570784,572404..572599,574886..575018,576287..576395,577777..577890,578026..578124,579544..579679,580531..580643,581332..581494,583498..583642,586417..586550,587287..587372,587485..587550,589089..589266,591395..591561,592724..592955,594530..594654,595904..596021,596831..596962,598069..598210,598295..598468,599792..599913,601634..601771,602730..602930,605072..605263,605997..606096,607031..607162,609658..609872,611715..611912,613562..613792,614360..614538,615705..615840,617194..617324,618082..618320,620407..620531,621031..621219,623221..623339,628131..628182))
location: region:568521-628182:-1
so has part: feature:628131-628182:-1:exon
so has part: feature:623221-623339:-1:exon
so has part: feature:621031-621219:-1:exon
so has part: feature:620407-620531:-1:exon
so has part: feature:618082-618320:-1:exon
so has part: feature:617194-617324:-1:exon
so has part: feature:615705-615840:-1:exon
so has part: feature:614360-614538:-1:exon
so has part: feature:613562-613792:-1:exon
so has part: feature:611715-611912:-1:exon
so has part: feature:609658-609872:-1:exon
so has part: feature:607031-607162:-1:exon
so has part: feature:605997-606096:-1:exon
so has part: feature:605072-605263:-1:exon
so has part: feature:602730-602930:-1:exon
so has part: feature:601634-601771:-1:exon
so has part: feature:599792-599913:-1:exon
so has part: feature:598295-598468:-1:exon
so has part: feature:598069-598210:-1:exon
so has part: feature:596831-596962:-1:exon
so has part: feature:595904-596021:-1:exon
so has part: feature:594530-594654:-1:exon
so has part: feature:592724-592955:-1:exon
so has part: feature:591395-591561:-1:exon
so has part: feature:589089-589266:-1:exon
so has part: feature:587485-587550:-1:exon
so has part: feature:587287-587372:-1:exon
so has part: feature:586417-586550:-1:exon
so has part: feature:583498-583642:-1:exon
so has part: feature:581332-581494:-1:exon
so has part: feature:580531-580643:-1:exon
so has part: feature:579544-579679:-1:exon
so has part: feature:578026-578124:-1:exon
so has part: feature:577777-577890:-1:exon
so has part: feature:576287-576395:-1:exon
so has part: feature:574886-575018:-1:exon
so has part: feature:572404-572599:-1:exon
so has part: feature:570621-570784:-1:exon
so has part: feature:569270-569399:-1:exon
so has part: feature:568521-568618:-1:exon

XP_032940166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:628131-628182:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623221-623339:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:621031-621219:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:620407-620531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:618082-618320:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:617194-617324:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:615705-615840:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:614360-614538:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:613562-613792:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:611715-611912:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:609658-609872:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:607031-607162:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:605997-606096:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:605072-605263:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:602730-602930:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:601634-601771:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:599792-599913:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:598295-598468:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:598069-598210:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:596831-596962:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:595904-596021:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:594530-594654:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:592724-592955:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:591395-591561:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:589089-589266:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:587485-587550:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:587287-587372:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:586417-586550:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:583498-583642:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:581332-581494:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:580531-580643:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:579544-579679:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:578026-578124:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:577777-577890:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:576287-576395:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:574886-575018:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:572404-572599:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:570621-570784:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:569270-569399:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:568521-568618:-1:exon

CHD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CHD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 3 isoform X1
translation: MAGALPGSGRVSPAAPPDGDEELLRGLEGALGVKKKKRGPRKQKENKPGKPRKRKKLVSEDELESERDEYPREEYREKSESGGSDSGGAARKRRRKHREKKEKKTKRRKKADDEGGQKVKAVEQKSSAQLLGAWGLEDVDHVFTEEDYHTLTNYKAFSQFMRPLIAKKNPKIPMSKMMTILGAKWREFSANNPFKGSAAAVAAAAAAAAAAVAEQVSAAVAAVAPEAPPPPLRKAKTKEGKGPGHKKRSKSPRVPELKRKMKGRKMAPLKIKLGVLGGKRKKSSSSEDAGEAEEESDAESPGVLGAAPRPDPTTRLKKLKRGRPGRKKKKGPGPEEEGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGRWSCPHCEKEGVQWEAKEEEEEEEEEEEEGEKEEEDDHMEYCRVCKDGGELLCCDACVSSYHIHCLNPPLPEVPNGEWLCPRCTCPVLKGRVQKILYWRWGEPPAPVAPPGTPQAQEGPPQALQGRSEREFFVKWVGLSYWHCSWIKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGDDDPKSEKRGAGGDPLFGGMEERFYRYGIKPEWMTVHRIINHSVDRKGQYHYLVKWRDLPYDQATWEEDEMPIPDYDLHKLAYWKHREVFMGEDPAQPRRYKKKKKETPGEGPPESPTNDPTVKYETQPRFITATGGTLHLYQLEGLNWLRFSWAQSTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPAFYVVTYTGDKDSRAIIRENEFSFDDNAMKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIEHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKASGKLLLLQKMLRKLKEQNHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVVIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKFGTEELFKDENEGDNKEEDSSVIHYDNEAIARLLDRNQDATDDADVQNMNEYLSSFKVAQYVVREEDKIEEIEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRVRKQVNYNDAAQEDQDNQSEYSVGSEEEDEDFDERPEGRRQSKRQLRNEKDKPLPPLLARVGGNIEVLGFNTRQRKAFLNAVMRWGMPPQDAFTSQWLVRDLRGKTEKEFKAYVSLFMRHLCEPGADGSETFADGVPREGLSRQQVLTRIGVMSLVKKKVQEFEHINGRWSLPELAPEPSADSKRSSRASSPAKTGPPSPEQSGPPSPEPPTPATPAPSERGDGPGPPPDREDGDTRDEKEPKGPEKMETDAPVPEVPLSPGDGSEAEGPRKGDEEEGPGHRDPEAEGTPAREERPGAEAEKGPGGDKGDEKTPEEEPKERPGDPDPKREEAKAEKEPRPDPRPNGRRDERAEKPRFMFNIADGGFTELHTLWQNEERAAISSGKLNEIWHRRHDYWLLAGIVLHGYARWTDIQNDGAFGVINEPFKGEASKGNFLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPSHPAMALNTRFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPATLSRIPPIAARLQMSERSILSRLASKGTESHPPPTFPPGPYATPPSYGGTFGTPPAGALPPPGGANYSQMPPGSFISAANGPPVLVKREREAEALEKKEPRGGEVICIDD
SIO_010081: CHD3
subclass of: SO_0000673
so part of: CHD3
location: complement(join(568521..568621,569270..569399,570621..570784,572404..572599,574886..575018,576287..576395,577777..577890,578026..578124,579544..579679,580531..580643,581332..581494,583498..583642,586417..586550,587287..587372,587485..587550,589089..589266,591395..591561,592724..592955,594530..594654,595904..596021,596831..596962,598069..598210,598295..598468,599792..599913,601634..601771,602730..602930,605072..605263,605997..606096,607031..607162,609658..609872,611715..611912,613562..613792,614360..614538,615705..615840,617194..617324,618082..618320,620407..620531,621031..621219,623221..623339,628131..628182))
location: region:568521-628182:-1
so has part: feature:628131-628182:-1:exon
so has part: feature:623221-623339:-1:exon
so has part: feature:621031-621219:-1:exon
so has part: feature:620407-620531:-1:exon
so has part: feature:618082-618320:-1:exon
so has part: feature:617194-617324:-1:exon
so has part: feature:615705-615840:-1:exon
so has part: feature:614360-614538:-1:exon
so has part: feature:613562-613792:-1:exon
so has part: feature:611715-611912:-1:exon
so has part: feature:609658-609872:-1:exon
so has part: feature:607031-607162:-1:exon
so has part: feature:605997-606096:-1:exon
so has part: feature:605072-605263:-1:exon
so has part: feature:602730-602930:-1:exon
so has part: feature:601634-601771:-1:exon
so has part: feature:599792-599913:-1:exon
so has part: feature:598295-598468:-1:exon
so has part: feature:598069-598210:-1:exon
so has part: feature:596831-596962:-1:exon
so has part: feature:595904-596021:-1:exon
so has part: feature:594530-594654:-1:exon
so has part: feature:592724-592955:-1:exon
so has part: feature:591395-591561:-1:exon
so has part: feature:589089-589266:-1:exon
so has part: feature:587485-587550:-1:exon
so has part: feature:587287-587372:-1:exon
so has part: feature:586417-586550:-1:exon
so has part: feature:583498-583642:-1:exon
so has part: feature:581332-581494:-1:exon
so has part: feature:580531-580643:-1:exon
so has part: feature:579544-579679:-1:exon
so has part: feature:578026-578124:-1:exon
so has part: feature:577777-577890:-1:exon
so has part: feature:576287-576395:-1:exon
so has part: feature:574886-575018:-1:exon
so has part: feature:572404-572599:-1:exon
so has part: feature:570621-570784:-1:exon
so has part: feature:569270-569399:-1:exon
so has part: feature:568521-568621:-1:exon

XP_032940164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:628131-628182:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623221-623339:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:621031-621219:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:620407-620531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:618082-618320:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:617194-617324:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:615705-615840:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:614360-614538:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:613562-613792:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:611715-611912:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:609658-609872:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:607031-607162:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:605997-606096:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:605072-605263:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:602730-602930:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:601634-601771:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:599792-599913:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:598295-598468:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:598069-598210:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:596831-596962:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:595904-596021:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:594530-594654:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:592724-592955:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:591395-591561:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:589089-589266:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:587485-587550:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:587287-587372:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:586417-586550:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:583498-583642:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:581332-581494:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:580531-580643:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:579544-579679:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:578026-578124:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:577777-577890:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:576287-576395:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:574886-575018:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:572404-572599:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:570621-570784:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:569270-569399:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:568521-568621:-1:exon

NAA38
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: NAA38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 639909..642577
location: region:639909-642577:1
so has part: feature:639909-642577:1:exon
subclass of: SO_0000010

117009895
type: Gene
SIO_000068: ncbigene

position:639909:1
position: 639909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:642577:1
position: 642577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:639909-642577:1:exon

NAA38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NAA38
product: N-alpha-acetyltransferase 38, NatC auxiliary subunit
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084249.1
SIO_010081: NAA38
subclass of: SO_0000673
so part of: NAA38
location: join(639909..639913,640098..640443,641323..641500,642391..642577)
location: region:639909-642577:1
so has part: feature:639909-639913:1:exon
so has part: feature:640098-640443:1:exon
so has part: feature:641323-641500:1:exon
so has part: feature:642391-642577:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:639909-639913:1:exon

position:639913:1
position: 639913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:640098-640443:1:exon

position:640098:1
position: 640098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640443:1
position: 640443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:641323-641500:1:exon

position:641323:1
position: 641323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:641500:1
position: 641500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:642391-642577:1:exon

position:642391:1
position: 642391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NAA38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: NAA38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-alpha-acetyltransferase 38, NatC auxiliary subunit
translation: MTPGPGSPPSPRRPSPWQRHRKSPPCASQGVLGNVVLCHVARYYRAVHAGKCSHGFSTRYGGSGARCTLGNVVTGSSTHYGFKRRAVHAGSCSAWLRPLGRGAIMADPPEEAGSGPAEPGPGVSGPPRGRQRLEALLNRSLRIRMSDGRTLVGAFLCTDRQSNVILGSAQEFLKAADAFPGSEPRVLGLAMVPGHHIVSIEVEPPYP
SIO_010081: NAA38
subclass of: SO_0000673
so part of: NAA38
location: join(639909..639913,640098..640443,641323..641500,642391..642485)
location: region:639909-642485:1
so has part: feature:639909-639913:1:exon
so has part: feature:640098-640443:1:exon
so has part: feature:641323-641500:1:exon
so has part: feature:642391-642485:1:exon

XP_032940140.1
type: Protein
SIO_000068: ncbiprotein

position:642485:1
position: 642485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:639909-639913:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:640098-640443:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:641323-641500:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:642391-642485:1:exon

KDM6B
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: KDM6B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(644679..664554)
location: region:644679-664554:-1
so has part: feature:644679-664554:-1:exon
subclass of: SO_0000010

117009896
type: Gene
SIO_000068: ncbigene

position:644679:-1
position: 644679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664554:-1
position: 664554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:644679-664554:-1:exon

KDM6B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: KDM6B
product: lysine demethylase 6B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084250.2
SIO_010081: KDM6B
subclass of: SO_0000673
so part of: KDM6B
location: complement(join(644679..644947,645927..646097,647516..647642,648445..648586,649647..649834,651171..651285,652477..652625,653458..653526,654319..654383,655833..656038,657172..657277,658030..658156,658728..659447,660326..660507,661686..661874,663371..663496,664525..664554))
location: region:644679-664554:-1
so has part: feature:664525-664554:-1:exon
so has part: feature:663371-663496:-1:exon
so has part: feature:661686-661874:-1:exon
so has part: feature:660326-660507:-1:exon
so has part: feature:658728-659447:-1:exon
so has part: feature:658030-658156:-1:exon
so has part: feature:657172-657277:-1:exon
so has part: feature:655833-656038:-1:exon
so has part: feature:654319-654383:-1:exon
so has part: feature:653458-653526:-1:exon
so has part: feature:652477-652625:-1:exon
so has part: feature:651171-651285:-1:exon
so has part: feature:649647-649834:-1:exon
so has part: feature:648445-648586:-1:exon
so has part: feature:647516-647642:-1:exon
so has part: feature:645927-646097:-1:exon
so has part: feature:644679-644947:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:664525-664554:-1:exon

position:664525:-1
position: 664525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:663371-663496:-1:exon

position:663371:-1
position: 663371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663496:-1
position: 663496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:661686-661874:-1:exon

position:661686:-1
position: 661686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661874:-1
position: 661874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:660326-660507:-1:exon

position:660326:-1
position: 660326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660507:-1
position: 660507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:658728-659447:-1:exon

position:658728:-1
position: 658728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:659447:-1
position: 659447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:658030-658156:-1:exon

position:658030:-1
position: 658030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658156:-1
position: 658156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:657172-657277:-1:exon

position:657172:-1
position: 657172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:657277:-1
position: 657277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:655833-656038:-1:exon

position:655833:-1
position: 655833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:656038:-1
position: 656038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:654319-654383:-1:exon

position:654319:-1
position: 654319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654383:-1
position: 654383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:653458-653526:-1:exon

position:653458:-1
position: 653458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:653526:-1
position: 653526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:652477-652625:-1:exon

position:652477:-1
position: 652477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:652625:-1
position: 652625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:651171-651285:-1:exon

position:651171:-1
position: 651171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:651285:-1
position: 651285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:649647-649834:-1:exon

position:649647:-1
position: 649647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:649834:-1
position: 649834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:648445-648586:-1:exon

position:648445:-1
position: 648445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648586:-1
position: 648586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:647516-647642:-1:exon

position:647516:-1
position: 647516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:647642:-1
position: 647642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:645927-646097:-1:exon

position:645927:-1
position: 645927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:646097:-1
position: 646097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:644679-644947:-1:exon

position:644947:-1
position: 644947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KDM6B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: KDM6B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase 6B
translation: MGLGAIKGIWGGCGALPPPPFPLPPGLWSPLPLPHSEAWAPPRRHGAPPDRQEQRLVAPPFPPPPRPSPAGPPGPLPSDLRAPPSRSPAATACVPCAPPRAPPRPPATSSRPPRAAPDHRYQPPEPPGPGGASGGVPTPHLPPAPPPCCAPPDPLPAPPLPWLKEPGGGDPLDEILPPTPPQLATSPPGWGSHPPAPARSESEALEEISRACETLAEQAGRPSPPSPDTPPKLGAGGRRHRRVPPSRHRDLRRGPPRRRHPRKEEREQQQQQQQQQQQQQRDRPVLATLDLQSSGVQEKGGPPPRLETKGGGPPNPPSAPPAAAGPPAAFVSSADLLKLRSLGEGPPKELKIRLIKVESGAGGAAGIPGLGGGTGGGGGGTGGDALVASEAGEPRGLPLAQLTIRHSAAEVVRASKQARLKGPFRESYLCPAQSVKPRIDAREQLPRDKLNPPTPSIYLESKRDAFSPVLLQFCTDPKNPITVIRGLAGSLRLNLGLFSTKTLVEASGEHAVEVRTQVQQPSDQNWDLSGTRQVWPCESSRSHTTIAKYAQYQASSFQESLQEDKDSEDEEAEEPDSTTETPPSPPDQKSHQIIKFGTNIDLSDAKRWKPQLQELLKLPAFMRVSSTGNMLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAFCDRHGVDYLTGSWWPILEDLYRSNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNVGPLTAYQYQLALERYEWNEVKNVKSIVPMIHVSWNVARTVKISDPDLYKMIKYCLLQSIKHCQVQRESLVRAGKKIAYQGRVKDEPAYYCNECDVEVFNILFVTSETGGRNTYLVHCEGCARRRAGGLAGVIVLEQYKTEELMQIYDGFTLVTPPTPR
SIO_010081: KDM6B
subclass of: SO_0000673
so part of: KDM6B
location: complement(join(644924..644947,645927..646097,647516..647642,648445..648586,649647..649834,651171..651285,652477..652625,653458..653526,654319..654383,655833..656038,657172..657277,658030..658156,658728..659447,660326..660507,661686..661874,663371..663496,664525..664554))
location: region:644924-664554:-1
so has part: feature:664525-664554:-1:exon
so has part: feature:663371-663496:-1:exon
so has part: feature:661686-661874:-1:exon
so has part: feature:660326-660507:-1:exon
so has part: feature:658728-659447:-1:exon
so has part: feature:658030-658156:-1:exon
so has part: feature:657172-657277:-1:exon
so has part: feature:655833-656038:-1:exon
so has part: feature:654319-654383:-1:exon
so has part: feature:653458-653526:-1:exon
so has part: feature:652477-652625:-1:exon
so has part: feature:651171-651285:-1:exon
so has part: feature:649647-649834:-1:exon
so has part: feature:648445-648586:-1:exon
so has part: feature:647516-647642:-1:exon
so has part: feature:645927-646097:-1:exon
so has part: feature:644924-644947:-1:exon

XP_032940141.1
type: Protein
SIO_000068: ncbiprotein

position:644924:-1
position: 644924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:664525-664554:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:663371-663496:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:661686-661874:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:660326-660507:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:658728-659447:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:658030-658156:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:657172-657277:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:655833-656038:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:654319-654383:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:653458-653526:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:652477-652625:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:651171-651285:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:649647-649834:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:648445-648586:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:647516-647642:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:645927-646097:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:644924-644947:-1:exon

LOC117009897
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009897
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(664725..667512)
location: region:664725-667512:-1
so has part: feature:664725-667512:-1:exon
subclass of: SO_0000010

117009897
type: Gene
SIO_000068: ncbigene

position:664725:-1
position: 664725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667512:-1
position: 667512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:664725-667512:-1:exon

LOC117009897
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009897
product: lysine-specific demethylase 6B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084251.1
SIO_010081: LOC117009897
subclass of: SO_0000673
so part of: LOC117009897
location: complement(join(664725..664743,664785..664861,665378..665473,666291..666576,667469..667512))
location: region:664725-667512:-1
so has part: feature:667469-667512:-1:exon
so has part: feature:666291-666576:-1:exon
so has part: feature:665378-665473:-1:exon
so has part: feature:664785-664861:-1:exon
so has part: feature:664725-664743:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:667469-667512:-1:exon

position:667469:-1
position: 667469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:666291-666576:-1:exon

position:666291:-1
position: 666291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666576:-1
position: 666576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:665378-665473:-1:exon

position:665378:-1
position: 665378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665473:-1
position: 665473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:664785-664861:-1:exon

position:664785:-1
position: 664785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664861:-1
position: 664861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:664725-664743:-1:exon

position:664743:-1
position: 664743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009897
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009897
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase 6B-like
translation: MGGPPLPHKAFYPPGAPLPGCVRALQPWDPPGPEATPELEEPPSCHHGRHRGHRGDIGPHRGDIGPHRGDIGPHRGDIGHRHGGDAIGGHRGDIGGHRGDIAARIGRLQQAQLWSFPPGPVSPPRARALPPLQQVWSLLHPEKRTFPAKRGGGAAEEGGGPPRPPRGASRPPP
SIO_010081: LOC117009897
subclass of: SO_0000673
so part of: LOC117009897
location: complement(join(664725..664743,664785..664861,665378..665473,666291..666576,667469..667512))
location: region:664725-667512:-1
so has part: feature:667469-667512:-1:exon
so has part: feature:666291-666576:-1:exon
so has part: feature:665378-665473:-1:exon
so has part: feature:664785-664861:-1:exon
so has part: feature:664725-664743:-1:exon

XP_032940142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:667469-667512:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:666291-666576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:665378-665473:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:664785-664861:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:664725-664743:-1:exon

LOC117009955
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009955
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(669651..683234)
location: region:669651-683234:-1
so has part: feature:669651-683234:-1:exon
subclass of: SO_0000011

117009955
type: Gene
SIO_000068: ncbigene

position:669651:-1
position: 669651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683234:-1
position: 683234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:669651-683234:-1:exon

LOC117009955
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117009955
product: uncharacterized LOC117009955
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_004420567.1
SIO_010081: LOC117009955
subclass of: SO_0000673
so part of: LOC117009955
location: complement(join(669651..669737,670515..670604,678116..678171,683174..683234))
location: region:669651-683234:-1
so has part: feature:683174-683234:-1:exon
so has part: feature:678116-678171:-1:exon
so has part: feature:670515-670604:-1:exon
so has part: feature:669651-669737:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:683174-683234:-1:exon

position:683174:-1
position: 683174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:678116-678171:-1:exon

position:678116:-1
position: 678116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:678171:-1
position: 678171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:670515-670604:-1:exon

position:670515:-1
position: 670515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670604:-1
position: 670604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:669651-669737:-1:exon

position:669737:-1
position: 669737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EFNB3
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: EFNB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(687594..692344)
location: region:687594-692344:-1
so has part: feature:687594-692344:-1:exon
subclass of: SO_0000010

117009898
type: Gene
SIO_000068: ncbigene

position:687594:-1
position: 687594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:692344:-1
position: 692344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:687594-692344:-1:exon

EFNB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: EFNB3
product: ephrin B3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033084252.1
SIO_010081: EFNB3
subclass of: SO_0000673
so part of: EFNB3
location: complement(join(687594..687865,687943..687981,688050..688142,688802..689079,692220..692344))
location: region:687594-692344:-1
so has part: feature:692220-692344:-1:exon
so has part: feature:688802-689079:-1:exon
so has part: feature:688050-688142:-1:exon
so has part: feature:687943-687981:-1:exon
so has part: feature:687594-687865:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:692220-692344:-1:exon

position:692220:-1
position: 692220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:688802-689079:-1:exon

position:688802:-1
position: 688802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689079:-1
position: 689079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:688050-688142:-1:exon

position:688050:-1
position: 688050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688142:-1
position: 688142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:687943-687981:-1:exon

position:687943:-1
position: 687943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687981:-1
position: 687981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:687594-687865:-1:exon

position:687865:-1
position: 687865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EFNB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: EFNB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin-B3
translation: MAGRAAALLVAVLGAGAAGLSLEPVVWHTGNRRFLEDGGYVLYPQIGDRLDLVCPGGAGAAQYEYYKLYLVGGAQARRCQVPPAPTLLLTCDRPQRDVRFTIKFQEFSPNLWGHEFRRQHDYYIITTSDGTPEGLENRQGGACLTRAMRVTLRVGQRPGAEPLPDEDGTGSANQTSPPGPGPPPARGGAVLGGAGGGAALLALVGAGGALWWRRRPRRPPKTPRGGGGAGARPRPHGPAHPLRELPLPPTAPPPAYYKV
SIO_010081: EFNB3
subclass of: SO_0000673
so part of: EFNB3
location: complement(join(687594..687865,687943..687981,688050..688142,688802..689079,692220..692317))
location: region:687594-692317:-1
so has part: feature:692220-692317:-1:exon
so has part: feature:688802-689079:-1:exon
so has part: feature:688050-688142:-1:exon
so has part: feature:687943-687981:-1:exon
so has part: feature:687594-687865:-1:exon

XP_032940143.1
type: Protein
SIO_000068: ncbiprotein

position:692317:-1
position: 692317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:692220-692317:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:688802-689079:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:688050-688142:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:687943-687981:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:687594-687865:-1:exon

WRAP53
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: WRAP53
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<694110..701960)
location: region:694110-701960:-1
so has part: feature:694110-701960:-1:exon
subclass of: SO_0000010

117009899
type: Gene
SIO_000068: ncbigene

position:694110:-1
position: 694110
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:701960:-1
position: 701960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:694110-701960:-1:exon

WRAP53
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: WRAP53
product: WD repeat containing antisense to TP53
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033084253.1
SIO_010081: WRAP53
subclass of: SO_0000673
so part of: WRAP53
location: complement(join(<694110..694317,695397..695540,696441..696544,696900..697108,697574..697706,699033..699123,699886..699974,700753..700861,701501..701599,701711..701780,701918..701960))
location: region:694110-701960:-1
so has part: feature:701918-701960:-1:exon
so has part: feature:701711-701780:-1:exon
so has part: feature:701501-701599:-1:exon
so has part: feature:700753-700861:-1:exon
so has part: feature:699886-699974:-1:exon
so has part: feature:699033-699123:-1:exon
so has part: feature:697574-697706:-1:exon
so has part: feature:696900-697108:-1:exon
so has part: feature:696441-696544:-1:exon
so has part: feature:695397-695540:-1:exon
so has part: feature:694110-694317:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:701918-701960:-1:exon

position:701918:-1
position: 701918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:701711-701780:-1:exon

position:701711:-1
position: 701711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:701780:-1
position: 701780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:701501-701599:-1:exon

position:701501:-1
position: 701501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:701599:-1
position: 701599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:700753-700861:-1:exon

position:700753:-1
position: 700753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700861:-1
position: 700861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:699886-699974:-1:exon

position:699886:-1
position: 699886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:699974:-1
position: 699974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:699033-699123:-1:exon

position:699033:-1
position: 699033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:699123:-1
position: 699123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:697574-697706:-1:exon

position:697574:-1
position: 697574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:697706:-1
position: 697706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:696900-697108:-1:exon

position:696900:-1
position: 696900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:697108:-1
position: 697108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:696441-696544:-1:exon

position:696441:-1
position: 696441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:696544:-1
position: 696544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:695397-695540:-1:exon

position:695397:-1
position: 695397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:695540:-1
position: 695540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:694110-694317:-1:exon

position:694317:-1
position: 694317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WRAP53
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: WRAP53
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomerase Cajal body protein 1
translation: MAAPMADAPQGVPESPGTPQDAAPEEPEAFEIFPFELSRAPRPVWGAREEFARRPENFLRGCKWAPDGSCVLTCSNDNALRIFDLPLPAGPPPGPPLPELAPAVQVAEGDTIYDFTWYPLMDSSQPPTCLVASSSRDNPVHLWDAFDGTLRGSFRAHNHLDEPVAPHSLAFTPDGSRLLGGFDGAVREFPTERPGRSGLERALKQGGQGQRGLIGCLAFSPSQSLFAAGSYGRSLGLYPLEGGGAVALWPRLPAAPTHLRFSPCGTHLYAGGRKDCHILCWDLRVPDRPLLALPRRVATNQRVTFDLDPSGQFLVSGDTDGFVTVWDTLTPPGAGDPPELPPLLRFRALRDCVNGTSLHPWLPLLATASGQRLFPAPWDSDSEEGTEEGPAPGGDIRLQLWWWGPDGPGDSGSGDCHQPGDNESGD
SIO_010081: WRAP53
subclass of: SO_0000673
so part of: WRAP53
location: complement(join(<694110..694317,695397..695540,696441..696544,696900..697108,697574..697706,699033..699123,699886..699974,700753..700861,701501..701599,701711..701780,701918..701939))
location: region:694110-701939:-1
so has part: feature:701918-701939:-1:exon
so has part: feature:701711-701780:-1:exon
so has part: feature:701501-701599:-1:exon
so has part: feature:700753-700861:-1:exon
so has part: feature:699886-699974:-1:exon
so has part: feature:699033-699123:-1:exon
so has part: feature:697574-697706:-1:exon
so has part: feature:696900-697108:-1:exon
so has part: feature:696441-696544:-1:exon
so has part: feature:695397-695540:-1:exon
so has part: feature:694110-694317:-1:exon

XP_032940144.1
type: Protein
SIO_000068: ncbiprotein

position:701939:-1
position: 701939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:701918-701939:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701711-701780:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:701501-701599:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:700753-700861:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:699886-699974:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:699033-699123:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:697574-697706:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:696900-697108:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:696441-696544:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:695397-695540:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:694110-694317:-1:exon

POLR2A
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: POLR2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(704525..752010)
location: region:704525-752010:-1
so has part: feature:704525-752010:-1:exon
subclass of: SO_0000010

117009914
type: Gene
SIO_000068: ncbigene

position:704525:-1
position: 704525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:752010:-1
position: 752010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:704525-752010:-1:exon

POLR2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: POLR2A
product: RNA polymerase II subunit A, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084271.2
SIO_010081: POLR2A
subclass of: SO_0000673
so part of: POLR2A
location: complement(join(704525..705852,707241..707390,708921..709034,709751..709937,711207..711410,712848..713030,714026..714130,714219..714319,715025..715271,716570..716794,719552..719757,721050..721155,722742..722913,725142..725325,726252..726289,726805..726989,728473..728676,729982..730076,731935..732103,733579..733788,736684..736894,739044..739168,740954..741086,742762..742982,744634..744663,744844..744975,745764..746045,747830..748003,749048..749184,750178..750310,751775..752010))
location: region:704525-752010:-1
so has part: feature:751775-752010:-1:exon
so has part: feature:750178-750310:-1:exon
so has part: feature:749048-749184:-1:exon
so has part: feature:747830-748003:-1:exon
so has part: feature:745764-746045:-1:exon
so has part: feature:744844-744975:-1:exon
so has part: feature:744634-744663:-1:exon
so has part: feature:742762-742982:-1:exon
so has part: feature:740954-741086:-1:exon
so has part: feature:739044-739168:-1:exon
so has part: feature:736684-736894:-1:exon
so has part: feature:733579-733788:-1:exon
so has part: feature:731935-732103:-1:exon
so has part: feature:729982-730076:-1:exon
so has part: feature:728473-728676:-1:exon
so has part: feature:726805-726989:-1:exon
so has part: feature:726252-726289:-1:exon
so has part: feature:725142-725325:-1:exon
so has part: feature:722742-722913:-1:exon
so has part: feature:721050-721155:-1:exon
so has part: feature:719552-719757:-1:exon
so has part: feature:716570-716794:-1:exon
so has part: feature:715025-715271:-1:exon
so has part: feature:714219-714319:-1:exon
so has part: feature:714026-714130:-1:exon
so has part: feature:712848-713030:-1:exon
so has part: feature:711207-711410:-1:exon
so has part: feature:709751-709937:-1:exon
so has part: feature:708921-709034:-1:exon
so has part: feature:707241-707390:-1:exon
so has part: feature:704525-705852:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:751775-752010:-1:exon

position:751775:-1
position: 751775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:750178-750310:-1:exon

position:750178:-1
position: 750178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:750310:-1
position: 750310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:749048-749184:-1:exon

position:749048:-1
position: 749048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:749184:-1
position: 749184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:747830-748003:-1:exon

position:747830:-1
position: 747830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:748003:-1
position: 748003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:745764-746045:-1:exon

position:745764:-1
position: 745764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:746045:-1
position: 746045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:744844-744975:-1:exon

position:744844:-1
position: 744844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744975:-1
position: 744975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:744634-744663:-1:exon

position:744634:-1
position: 744634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744663:-1
position: 744663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:742762-742982:-1:exon

position:742762:-1
position: 742762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742982:-1
position: 742982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:740954-741086:-1:exon

position:740954:-1
position: 740954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:741086:-1
position: 741086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:739044-739168:-1:exon

position:739044:-1
position: 739044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739168:-1
position: 739168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:736684-736894:-1:exon

position:736684:-1
position: 736684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736894:-1
position: 736894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:733579-733788:-1:exon

position:733579:-1
position: 733579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:733788:-1
position: 733788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:731935-732103:-1:exon

position:731935:-1
position: 731935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:732103:-1
position: 732103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:729982-730076:-1:exon

position:729982:-1
position: 729982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:730076:-1
position: 730076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:728473-728676:-1:exon

position:728473:-1
position: 728473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728676:-1
position: 728676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:726805-726989:-1:exon

position:726805:-1
position: 726805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:726989:-1
position: 726989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:726252-726289:-1:exon

position:726252:-1
position: 726252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:726289:-1
position: 726289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:725142-725325:-1:exon

position:725142:-1
position: 725142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:725325:-1
position: 725325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:722742-722913:-1:exon

position:722742:-1
position: 722742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722913:-1
position: 722913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:721050-721155:-1:exon

position:721050:-1
position: 721050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:721155:-1
position: 721155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:719552-719757:-1:exon

position:719552:-1
position: 719552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719757:-1
position: 719757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:716570-716794:-1:exon

position:716570:-1
position: 716570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:716794:-1
position: 716794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:715025-715271:-1:exon

position:715025:-1
position: 715025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715271:-1
position: 715271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:714219-714319:-1:exon

position:714219:-1
position: 714219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:714319:-1
position: 714319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:714026-714130:-1:exon

position:714026:-1
position: 714026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:714130:-1
position: 714130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:712848-713030:-1:exon

position:712848:-1
position: 712848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713030:-1
position: 713030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:711207-711410:-1:exon

position:711207:-1
position: 711207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:711410:-1
position: 711410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:709751-709937:-1:exon

position:709751:-1
position: 709751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709937:-1
position: 709937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:708921-709034:-1:exon

position:708921:-1
position: 708921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709034:-1
position: 709034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:707241-707390:-1:exon

position:707241:-1
position: 707241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707390:-1
position: 707390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:704525-705852:-1:exon

position:705852:-1
position: 705852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

POLR2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: POLR2A
product: RNA polymerase II subunit A, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084270.2
SIO_010081: POLR2A
subclass of: SO_0000673
so part of: POLR2A
location: complement(join(704525..705852,707241..707390,708921..709034,709751..709937,711207..711410,712848..713030,714026..714130,714219..714319,715025..715271,716570..716794,719552..719757,721050..721155,722742..722913,725142..725325,726252..726289,726805..726989,728473..728676,729982..730076,731935..732103,733579..733788,736684..736894,739044..739168,740954..741086,742762..742982,744814..744975,745764..746045,747830..748003,749048..749184,750178..750310,751775..752010))
location: region:704525-752010:-1
so has part: feature:751775-752010:-1:exon
so has part: feature:750178-750310:-1:exon
so has part: feature:749048-749184:-1:exon
so has part: feature:747830-748003:-1:exon
so has part: feature:745764-746045:-1:exon
so has part: feature:744814-744975:-1:exon
so has part: feature:742762-742982:-1:exon
so has part: feature:740954-741086:-1:exon
so has part: feature:739044-739168:-1:exon
so has part: feature:736684-736894:-1:exon
so has part: feature:733579-733788:-1:exon
so has part: feature:731935-732103:-1:exon
so has part: feature:729982-730076:-1:exon
so has part: feature:728473-728676:-1:exon
so has part: feature:726805-726989:-1:exon
so has part: feature:726252-726289:-1:exon
so has part: feature:725142-725325:-1:exon
so has part: feature:722742-722913:-1:exon
so has part: feature:721050-721155:-1:exon
so has part: feature:719552-719757:-1:exon
so has part: feature:716570-716794:-1:exon
so has part: feature:715025-715271:-1:exon
so has part: feature:714219-714319:-1:exon
so has part: feature:714026-714130:-1:exon
so has part: feature:712848-713030:-1:exon
so has part: feature:711207-711410:-1:exon
so has part: feature:709751-709937:-1:exon
so has part: feature:708921-709034:-1:exon
so has part: feature:707241-707390:-1:exon
so has part: feature:704525-705852:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:751775-752010:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:750178-750310:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:749048-749184:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:747830-748003:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:745764-746045:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:744814-744975:-1:exon

position:744814:-1
position: 744814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:742762-742982:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:740954-741086:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:739044-739168:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:736684-736894:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:733579-733788:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:731935-732103:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:729982-730076:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:728473-728676:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:726805-726989:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:726252-726289:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:725142-725325:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:722742-722913:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:721050-721155:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:719552-719757:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:716570-716794:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:715025-715271:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:714219-714319:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:714026-714130:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:712848-713030:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:711207-711410:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:709751-709937:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:708921-709034:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:707241-707390:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:704525-705852:-1:exon

POLR2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: POLR2A
product: RNA polymerase II subunit A, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084269.2
SIO_010081: POLR2A
subclass of: SO_0000673
so part of: POLR2A
location: complement(join(704525..705852,707241..707390,708921..709034,709751..709937,711207..711410,712848..713030,714026..714130,714219..714319,715025..715271,716570..716794,719552..719757,721050..721155,722742..722913,725142..725325,726767..726989,728473..728676,729982..730076,731935..732103,733579..733788,736684..736894,739044..739168,740954..741086,742762..742982,744814..744975,745764..746045,747830..748003,749048..749184,750178..750310,751775..752010))
location: region:704525-752010:-1
so has part: feature:751775-752010:-1:exon
so has part: feature:750178-750310:-1:exon
so has part: feature:749048-749184:-1:exon
so has part: feature:747830-748003:-1:exon
so has part: feature:745764-746045:-1:exon
so has part: feature:744814-744975:-1:exon
so has part: feature:742762-742982:-1:exon
so has part: feature:740954-741086:-1:exon
so has part: feature:739044-739168:-1:exon
so has part: feature:736684-736894:-1:exon
so has part: feature:733579-733788:-1:exon
so has part: feature:731935-732103:-1:exon
so has part: feature:729982-730076:-1:exon
so has part: feature:728473-728676:-1:exon
so has part: feature:726767-726989:-1:exon
so has part: feature:725142-725325:-1:exon
so has part: feature:722742-722913:-1:exon
so has part: feature:721050-721155:-1:exon
so has part: feature:719552-719757:-1:exon
so has part: feature:716570-716794:-1:exon
so has part: feature:715025-715271:-1:exon
so has part: feature:714219-714319:-1:exon
so has part: feature:714026-714130:-1:exon
so has part: feature:712848-713030:-1:exon
so has part: feature:711207-711410:-1:exon
so has part: feature:709751-709937:-1:exon
so has part: feature:708921-709034:-1:exon
so has part: feature:707241-707390:-1:exon
so has part: feature:704525-705852:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:751775-752010:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:750178-750310:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:749048-749184:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:747830-748003:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:745764-746045:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:744814-744975:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:742762-742982:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:740954-741086:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:739044-739168:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:736684-736894:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:733579-733788:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:731935-732103:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:729982-730076:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:728473-728676:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:726767-726989:-1:exon

position:726767:-1
position: 726767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:725142-725325:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:722742-722913:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:721050-721155:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:719552-719757:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:716570-716794:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:715025-715271:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:714219-714319:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:714026-714130:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:712848-713030:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:711207-711410:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:709751-709937:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:708921-709034:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:707241-707390:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:704525-705852:-1:exon

POLR2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: POLR2A
product: RNA polymerase II subunit A, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084272.2
SIO_010081: POLR2A
subclass of: SO_0000673
so part of: POLR2A
location: complement(join(704525..705852,707241..707390,708921..709034,709751..709937,711207..711410,712848..713030,714026..714130,714219..714319,715025..715271,716570..716794,719552..719757,721050..721155,722742..722913,725142..725325,726252..726289,726805..726989,728473..728676,729982..730076,731935..732103,733579..733788,736684..736894,739044..739168,740954..741086,742762..742982,744814..744975,745232..745300))
location: region:704525-745300:-1
so has part: feature:745232-745300:-1:exon
so has part: feature:744814-744975:-1:exon
so has part: feature:742762-742982:-1:exon
so has part: feature:740954-741086:-1:exon
so has part: feature:739044-739168:-1:exon
so has part: feature:736684-736894:-1:exon
so has part: feature:733579-733788:-1:exon
so has part: feature:731935-732103:-1:exon
so has part: feature:729982-730076:-1:exon
so has part: feature:728473-728676:-1:exon
so has part: feature:726805-726989:-1:exon
so has part: feature:726252-726289:-1:exon
so has part: feature:725142-725325:-1:exon
so has part: feature:722742-722913:-1:exon
so has part: feature:721050-721155:-1:exon
so has part: feature:719552-719757:-1:exon
so has part: feature:716570-716794:-1:exon
so has part: feature:715025-715271:-1:exon
so has part: feature:714219-714319:-1:exon
so has part: feature:714026-714130:-1:exon
so has part: feature:712848-713030:-1:exon
so has part: feature:711207-711410:-1:exon
so has part: feature:709751-709937:-1:exon
so has part: feature:708921-709034:-1:exon
so has part: feature:707241-707390:-1:exon
so has part: feature:704525-705852:-1:exon

position:745300:-1
position: 745300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:745232-745300:-1:exon

position:745232:-1
position: 745232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:744814-744975:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:742762-742982:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:740954-741086:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:739044-739168:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:736684-736894:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:733579-733788:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:731935-732103:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:729982-730076:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:728473-728676:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:726805-726989:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:726252-726289:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:725142-725325:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:722742-722913:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:721050-721155:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:719552-719757:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:716570-716794:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:715025-715271:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:714219-714319:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:714026-714130:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:712848-713030:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:711207-711410:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:709751-709937:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:708921-709034:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:707241-707390:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:704525-705852:-1:exon

POLR2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: POLR2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerase II subunit RPB1 isoform X3
translation: MHGGPPSGDSACPLRTIKRVQFGILSPDEMKRMSVTEGGIKYPETTEGGRPKLGGLMDPRQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLGKTMKILRCVCFFCSKLLVDSNNPKIKDILGKSKGQPKKRLTHVYDLCKGKNICEGGEEMDHKFGVEQPEGDEDLTKEKGHGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMDPKFARPEWMVCTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAAHVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVDFSARTVITPDPNLAIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYIIRDNGDRIDLRFHPKPSDLHLQIGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVIVENGELIMGILCKKSLGTSAGSLVHISYLEMGHDTTRLFYSNIQTVINNWLLIEGHTIGIGDSIADAKTYQDIQNTIKKAKQDVIEVIEKAHNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKINISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGESVEFQNLATLKPSNKAFEKKFKFDYTNERALRRTLQEELVKDILSNAHIQNELEREFERMREDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINSRLPSDLHPVKVVEGVKELSRKLVIVNGEDPLSRQAQENATLLFNIHLRSTLCSRRMVEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMPDFDVSRISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKIIITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALERELYHVISFDGSYVNYRHLALLCDTMTSRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKHGMEIPSALPGLGVGGPTGMFFGSAPSPMGGMSPAMTPWNQGATPAYGAWSPSVGSGMTPGGAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDDDN
SIO_010081: POLR2A
subclass of: SO_0000673
so part of: POLR2A
location: complement(join(704696..705852,707241..707390,708921..709034,709751..709937,711207..711410,712848..713030,714026..714130,714219..714319,715025..715271,716570..716794,719552..719757,721050..721155,722742..722913,725142..725325,726252..726289,726805..726989,728473..728676,729982..730076,731935..732103,733579..733788,736684..736894,739044..739168,740954..741086,742762..742982,744634..744663,744844..744975,745764..746045,747830..748003,749048..749184,750178..750310,751775..751864))
location: region:704696-751864:-1
so has part: feature:751775-751864:-1:exon
so has part: feature:750178-750310:-1:exon
so has part: feature:749048-749184:-1:exon
so has part: feature:747830-748003:-1:exon
so has part: feature:745764-746045:-1:exon
so has part: feature:744844-744975:-1:exon
so has part: feature:744634-744663:-1:exon
so has part: feature:742762-742982:-1:exon
so has part: feature:740954-741086:-1:exon
so has part: feature:739044-739168:-1:exon
so has part: feature:736684-736894:-1:exon
so has part: feature:733579-733788:-1:exon
so has part: feature:731935-732103:-1:exon
so has part: feature:729982-730076:-1:exon
so has part: feature:728473-728676:-1:exon
so has part: feature:726805-726989:-1:exon
so has part: feature:726252-726289:-1:exon
so has part: feature:725142-725325:-1:exon
so has part: feature:722742-722913:-1:exon
so has part: feature:721050-721155:-1:exon
so has part: feature:719552-719757:-1:exon
so has part: feature:716570-716794:-1:exon
so has part: feature:715025-715271:-1:exon
so has part: feature:714219-714319:-1:exon
so has part: feature:714026-714130:-1:exon
so has part: feature:712848-713030:-1:exon
so has part: feature:711207-711410:-1:exon
so has part: feature:709751-709937:-1:exon
so has part: feature:708921-709034:-1:exon
so has part: feature:707241-707390:-1:exon
so has part: feature:704696-705852:-1:exon

XP_032940162.1
type: Protein
SIO_000068: ncbiprotein

position:704696:-1
position: 704696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:751864:-1
position: 751864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751775-751864:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:750178-750310:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:749048-749184:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:747830-748003:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:745764-746045:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:744844-744975:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:744634-744663:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:742762-742982:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:740954-741086:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:739044-739168:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:736684-736894:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:733579-733788:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:731935-732103:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:729982-730076:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:728473-728676:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:726805-726989:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:726252-726289:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:725142-725325:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:722742-722913:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:721050-721155:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:719552-719757:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:716570-716794:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:715025-715271:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:714219-714319:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:714026-714130:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:712848-713030:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:711207-711410:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:709751-709937:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:708921-709034:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:707241-707390:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:704696-705852:-1:exon

POLR2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: POLR2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerase II subunit RPB1 isoform X2
translation: MHGGPPSGDSACPLRTIKRVQFGILSPDEMKRMSVTEGGIKYPETTEGGRPKLGGLMDPRQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLGKTMKILRCVCFFCSKLLVDSNNPKIKDILGKSKGQPKKRLTHVYDLCKGKNICEGGEEMDHKFGVEQPEGDEDLTKEKGHGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMDPKFARPEWMVCTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAAHVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVDFSARTVITPDPNLAIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYIIRDNGDRIDLRFHPKPSDLHLQIGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVIVENGELIMGILCKKSLGTSAGSLVHISYLEMGHDTTRLFYSNIQTVINNWLLIEGHTIGIGDSIADAKTYQDIQNTIKKAKQDVIEVIEKAHNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKINISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGESVEFQNLATLKPSNKAFEKKFKFDYTNERALRRTLQEELVKDILSNAHIQNELEREFERMREDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINSRLPSDLHPVKVVEGVKELSRKLVIVNGEDPLSRQAQENATLLFNIHLRSTLCSRRMVEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMPDFDVSRISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKIIITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALERELYHVISFDGSYVNYRHLALLCDTMTSRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKHGMEIPSALPGLGVGGPTGMFFGSAPSPMGGMSPAMTPWNQGATPAYGAWSPSVGSGMTPGGAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDDDN
SIO_010081: POLR2A
subclass of: SO_0000673
so part of: POLR2A
location: complement(join(704696..705852,707241..707390,708921..709034,709751..709937,711207..711410,712848..713030,714026..714130,714219..714319,715025..715271,716570..716794,719552..719757,721050..721155,722742..722913,725142..725325,726252..726289,726805..726989,728473..728676,729982..730076,731935..732103,733579..733788,736684..736894,739044..739168,740954..741086,742762..742982,744814..744975,745764..746045,747830..748003,749048..749184,750178..750310,751775..751864))
location: region:704696-751864:-1
so has part: feature:751775-751864:-1:exon
so has part: feature:750178-750310:-1:exon
so has part: feature:749048-749184:-1:exon
so has part: feature:747830-748003:-1:exon
so has part: feature:745764-746045:-1:exon
so has part: feature:744814-744975:-1:exon
so has part: feature:742762-742982:-1:exon
so has part: feature:740954-741086:-1:exon
so has part: feature:739044-739168:-1:exon
so has part: feature:736684-736894:-1:exon
so has part: feature:733579-733788:-1:exon
so has part: feature:731935-732103:-1:exon
so has part: feature:729982-730076:-1:exon
so has part: feature:728473-728676:-1:exon
so has part: feature:726805-726989:-1:exon
so has part: feature:726252-726289:-1:exon
so has part: feature:725142-725325:-1:exon
so has part: feature:722742-722913:-1:exon
so has part: feature:721050-721155:-1:exon
so has part: feature:719552-719757:-1:exon
so has part: feature:716570-716794:-1:exon
so has part: feature:715025-715271:-1:exon
so has part: feature:714219-714319:-1:exon
so has part: feature:714026-714130:-1:exon
so has part: feature:712848-713030:-1:exon
so has part: feature:711207-711410:-1:exon
so has part: feature:709751-709937:-1:exon
so has part: feature:708921-709034:-1:exon
so has part: feature:707241-707390:-1:exon
so has part: feature:704696-705852:-1:exon

XP_032940161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:751775-751864:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:750178-750310:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:749048-749184:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:747830-748003:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:745764-746045:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:744814-744975:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:742762-742982:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:740954-741086:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:739044-739168:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:736684-736894:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:733579-733788:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:731935-732103:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:729982-730076:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:728473-728676:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:726805-726989:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:726252-726289:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:725142-725325:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:722742-722913:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:721050-721155:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:719552-719757:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:716570-716794:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:715025-715271:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:714219-714319:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:714026-714130:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:712848-713030:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:711207-711410:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:709751-709937:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:708921-709034:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:707241-707390:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:704696-705852:-1:exon

POLR2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: POLR2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerase II subunit RPB1 isoform X1
translation: MHGGPPSGDSACPLRTIKRVQFGILSPDEMKRMSVTEGGIKYPETTEGGRPKLGGLMDPRQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLGKTMKILRCVCFFCSKLLVDSNNPKIKDILGKSKGQPKKRLTHVYDLCKGKNICEGGEEMDHKFGVEQPEGDEDLTKEKGHGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMDPKFARPEWMVCTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAAHVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVDFSARTVITPDPNLAIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYIIRDNGDRIDLRFHPKPSDLHLQIGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVIVENGELIMGILCKKSLGTSAGSLVHISYLEMGHDTTRLFYSNIQTVINNWLLIEGHTIGIGDSIADAKTYQDIQNTIKKAKQDVIEVIEKAHNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKINISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGESVEFQNLATLKPSNKAFEKKFKFDYTNERALRRTLQEELVKDILSNAHIQNELEREFERMREDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINSRLPSDLHPVKVVEGVKELSRKLVIVNGEDPLSRQAQENATLLFNIHLRSTLCSRRMVEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMPDFDVSRISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKIIITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALERELYHVISFDGSYVNYRHLALLCDTMTSRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKHGMEIPSALPGLGVGGPTGMFFGSAPSPMGGMSPAMTPWNQGATPAYGAWSPSVGSGMTPGGAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDDDN
SIO_010081: POLR2A
subclass of: SO_0000673
so part of: POLR2A
location: complement(join(704696..705852,707241..707390,708921..709034,709751..709937,711207..711410,712848..713030,714026..714130,714219..714319,715025..715271,716570..716794,719552..719757,721050..721155,722742..722913,725142..725325,726767..726989,728473..728676,729982..730076,731935..732103,733579..733788,736684..736894,739044..739168,740954..741086,742762..742982,744814..744975,745764..746045,747830..748003,749048..749184,750178..750310,751775..751864))
location: region:704696-751864:-1
so has part: feature:751775-751864:-1:exon
so has part: feature:750178-750310:-1:exon
so has part: feature:749048-749184:-1:exon
so has part: feature:747830-748003:-1:exon
so has part: feature:745764-746045:-1:exon
so has part: feature:744814-744975:-1:exon
so has part: feature:742762-742982:-1:exon
so has part: feature:740954-741086:-1:exon
so has part: feature:739044-739168:-1:exon
so has part: feature:736684-736894:-1:exon
so has part: feature:733579-733788:-1:exon
so has part: feature:731935-732103:-1:exon
so has part: feature:729982-730076:-1:exon
so has part: feature:728473-728676:-1:exon
so has part: feature:726767-726989:-1:exon
so has part: feature:725142-725325:-1:exon
so has part: feature:722742-722913:-1:exon
so has part: feature:721050-721155:-1:exon
so has part: feature:719552-719757:-1:exon
so has part: feature:716570-716794:-1:exon
so has part: feature:715025-715271:-1:exon
so has part: feature:714219-714319:-1:exon
so has part: feature:714026-714130:-1:exon
so has part: feature:712848-713030:-1:exon
so has part: feature:711207-711410:-1:exon
so has part: feature:709751-709937:-1:exon
so has part: feature:708921-709034:-1:exon
so has part: feature:707241-707390:-1:exon
so has part: feature:704696-705852:-1:exon

XP_032940160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:751775-751864:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:750178-750310:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:749048-749184:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:747830-748003:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:745764-746045:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:744814-744975:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:742762-742982:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:740954-741086:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:739044-739168:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:736684-736894:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:733579-733788:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:731935-732103:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:729982-730076:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:728473-728676:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:726767-726989:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:725142-725325:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:722742-722913:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:721050-721155:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:719552-719757:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:716570-716794:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:715025-715271:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:714219-714319:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:714026-714130:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:712848-713030:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:711207-711410:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:709751-709937:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:708921-709034:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:707241-707390:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:704696-705852:-1:exon

POLR2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: POLR2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerase II subunit RPB1 isoform X4
translation: MQDSARNQDDLTHKLADIVKINNQLRRNEQNGAAAHVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVDFSARTVITPDPNLAIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYIIRDNGDRIDLRFHPKPSDLHLQIGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVIVENGELIMGILCKKSLGTSAGSLVHISYLEMGHDTTRLFYSNIQTVINNWLLIEGHTIGIGDSIADAKTYQDIQNTIKKAKQDVIEVIEKAHNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKINISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGESVEFQNLATLKPSNKAFEKKFKFDYTNERALRRTLQEELVKDILSNAHIQNELEREFERMREDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINSRLPSDLHPVKVVEGVKELSRKLVIVNGEDPLSRQAQENATLLFNIHLRSTLCSRRMVEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMPDFDVSRISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKIIITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALERELYHVISFDGSYVNYRHLALLCDTMTSRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKHGMEIPSALPGLGVGGPTGMFFGSAPSPMGGMSPAMTPWNQGATPAYGAWSPSVGSGMTPGGAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDDDN
SIO_010081: POLR2A
subclass of: SO_0000673
so part of: POLR2A
location: complement(join(704696..705852,707241..707390,708921..709034,709751..709937,711207..711410,712848..713030,714026..714130,714219..714319,715025..715271,716570..716794,719552..719757,721050..721155,722742..722913,725142..725325,726252..726289,726805..726989,728473..728676,729982..730076,731935..732103,733579..733788,736684..736894,739044..739168,740954..741086,742762..742982,744814..744975,745232..745255))
location: region:704696-745255:-1
so has part: feature:745232-745255:-1:exon
so has part: feature:744814-744975:-1:exon
so has part: feature:742762-742982:-1:exon
so has part: feature:740954-741086:-1:exon
so has part: feature:739044-739168:-1:exon
so has part: feature:736684-736894:-1:exon
so has part: feature:733579-733788:-1:exon
so has part: feature:731935-732103:-1:exon
so has part: feature:729982-730076:-1:exon
so has part: feature:728473-728676:-1:exon
so has part: feature:726805-726989:-1:exon
so has part: feature:726252-726289:-1:exon
so has part: feature:725142-725325:-1:exon
so has part: feature:722742-722913:-1:exon
so has part: feature:721050-721155:-1:exon
so has part: feature:719552-719757:-1:exon
so has part: feature:716570-716794:-1:exon
so has part: feature:715025-715271:-1:exon
so has part: feature:714219-714319:-1:exon
so has part: feature:714026-714130:-1:exon
so has part: feature:712848-713030:-1:exon
so has part: feature:711207-711410:-1:exon
so has part: feature:709751-709937:-1:exon
so has part: feature:708921-709034:-1:exon
so has part: feature:707241-707390:-1:exon
so has part: feature:704696-705852:-1:exon

XP_032940163.1
type: Protein
SIO_000068: ncbiprotein

position:745255:-1
position: 745255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:745232-745255:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:744814-744975:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:742762-742982:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:740954-741086:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:739044-739168:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:736684-736894:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:733579-733788:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:731935-732103:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:729982-730076:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:728473-728676:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:726805-726989:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:726252-726289:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:725142-725325:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:722742-722913:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:721050-721155:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:719552-719757:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:716570-716794:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:715025-715271:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:714219-714319:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:714026-714130:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:712848-713030:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:711207-711410:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:709751-709937:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:708921-709034:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:707241-707390:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:704696-705852:-1:exon

LOC117009916
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009916
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 752114..754345
location: region:752114-754345:1
so has part: feature:752114-754345:1:exon
subclass of: SO_0000011

117009916
type: Gene
SIO_000068: ncbigene

position:752114:1
position: 752114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754345:1
position: 754345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:752114-754345:1:exon

LOC117009916
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117009916
product: uncharacterized LOC117009916
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_004420556.1
SIO_010081: LOC117009916
subclass of: SO_0000673
so part of: LOC117009916
location: join(752114..753481,753603..754345)
location: region:752114-754345:1
so has part: feature:752114-753481:1:exon
so has part: feature:753603-754345:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:752114-753481:1:exon

position:753481:1
position: 753481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:753603-754345:1:exon

position:753603:1
position: 753603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117009901
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009901
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 755270..762924
location: region:755270-762924:1
so has part: feature:755270-762924:1:exon
subclass of: SO_0000010

117009901
type: Gene
SIO_000068: ncbigene

position:755270:1
position: 755270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:762924:1
position: 762924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:755270-762924:1:exon

LOC117009901
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009901
product: zinc finger and BTB domain-containing protein 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033084254.1
SIO_010081: LOC117009901
subclass of: SO_0000673
so part of: LOC117009901
location: join(755270..755353,757913..757993,758830..758906,760309..762924)
location: region:755270-762924:1
so has part: feature:755270-755353:1:exon
so has part: feature:757913-757993:1:exon
so has part: feature:758830-758906:1:exon
so has part: feature:760309-762924:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:755270-755353:1:exon

position:755353:1
position: 755353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:757913-757993:1:exon

position:757913:1
position: 757913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757993:1
position: 757993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:758830-758906:1:exon

position:758830:1
position: 758830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758906:1
position: 758906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:760309-762924:1:exon

position:760309:1
position: 760309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117009901
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009901
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 4-like
translation: MAPVVEVSDAGHCRALLLELNEQRLRGQFCDVTIIAEDTKFRAHKNVLAASSPFFKRALAQEPTCPSPAQVLELPDVQAGVFSDVLNFIYNSRLAVPSPAAARALGAVGRRLGIPSLQGLEAGPPPRDMNGTWTPPPPAGPAGDPRPPAAPVDLTCPARPGETATAGGETAPTGGDTVTASPSPASPSSPSASLRCGLCGRGFSSAAALGFHAKLHRGRRGLCCRHCGKSFIHVKRLQTHEVGCRDGDGDVDGTTGTGTTGAVTTGVITTGVVTTTTTTAAAAVAAAPKAAKKALLLRHRALEPGAEQEPLVKVVDGQVLYLCGVCQRSYMTLSSLKRHANVHSWRRKYPCRYCDKVFALAEYRTKHEVWHTGERRYQCIFCWDTFVTYYNLKTHQKAFHGISPGLIASEKTPNGGYRPKLNALKLYRLLPMRSHKRPYKTYSQGAVPDGALLPPAAPGDAAAAAAFPPAPRPEPASVIAYGRPAPSVIVHGGSGAASVIAYNGRAGEEPPGLPEGPAAAPVTPAVPIKKQVLRDYIEAQRAAAAAATEATAAATTPQNSSGGAGGGRTMTYVAKPAYAGSAAGEGLCQITVRIGEEAIVKRRISGTDLRGDGAEPRRGDNDNNDSDAEDRPWRPYYSYKAKRKAGGGTANPGAAAGAKKPRWRRKLRSLRFAPGDEDDDGDDGDAQQRRGDAPRRRERQHPCRVCGKSFPALRKLRKHQRGHEAAAAAPGTAPVPPAGRVGRRPSLRFACPTCAKVCKTAAALSRHAQRHRRRSPGSPEGSPGSAEGSAEGSAPGSPEGSAPGSPQGSPQGSAPGSAPGSAPGSPAPPTVIAYTPPAAGRDEAPADQGVAPLSPGVAGGGDTGGG
SIO_010081: LOC117009901
subclass of: SO_0000673
so part of: LOC117009901
location: 760324..762924
location: region:760324-762924:1
so has part: feature:760324-762924:1:exon

XP_032940145.1
type: Protein
SIO_000068: ncbiprotein

position:760324:1
position: 760324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:760324-762924:1:exon

GRK1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: GRK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(770973..781127)
location: region:770973-781127:-1
so has part: feature:770973-781127:-1:exon
subclass of: SO_0000010

117009929
type: Gene
SIO_000068: ncbigene

position:770973:-1
position: 770973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:781127:-1
position: 781127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:770973-781127:-1:exon

GRK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: GRK1
product: G protein-coupled receptor kinase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084289.1
SIO_010081: GRK1
subclass of: SO_0000673
so part of: GRK1
location: complement(join(770973..771998,772969..773170,773834..773958,774415..774498,775649..775806,776880..777007,777784..778070,780656..781127))
location: region:770973-781127:-1
so has part: feature:780656-781127:-1:exon
so has part: feature:777784-778070:-1:exon
so has part: feature:776880-777007:-1:exon
so has part: feature:775649-775806:-1:exon
so has part: feature:774415-774498:-1:exon
so has part: feature:773834-773958:-1:exon
so has part: feature:772969-773170:-1:exon
so has part: feature:770973-771998:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:780656-781127:-1:exon

position:780656:-1
position: 780656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:777784-778070:-1:exon

position:777784:-1
position: 777784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778070:-1
position: 778070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:776880-777007:-1:exon

position:776880:-1
position: 776880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777007:-1
position: 777007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:775649-775806:-1:exon

position:775649:-1
position: 775649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775806:-1
position: 775806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:774415-774498:-1:exon

position:774415:-1
position: 774415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:774498:-1
position: 774498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:773834-773958:-1:exon

position:773834:-1
position: 773834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:773958:-1
position: 773958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:772969-773170:-1:exon

position:772969:-1
position: 772969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:773170:-1
position: 773170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:770973-771998:-1:exon

position:771998:-1
position: 771998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GRK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: GRK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rhodopsin kinase GRK1
translation: MDIGGLETVVANSAYVSARGGPGAGRDRRSKAQLRLPHISQCEALRAQLGGTAGAQNGGPGAPNGAPPARTQDGGQETSFRWQCVEQPIGKLLFRRFLEGAPQFAAAGALWSEIEAFERCEDAEREGTAKRLRSRFFTPGGSEHCGFLSAGATAPPAGSPLQGDAFAQARQELLAHLEAAAWAPYRASPEFSRFVQFKWLESQAVNADAFVEFRVLGKGGFGEVCACQRRATGKMYANKRLNKKRLKKRNGYEAALVEKRILARVHSRFIVSLACAFQTKTDLCLVMTIMNGGDLRFHIYNVDEENPGFAEPRAVFYTAQILLGLEHLHQHRIVYRDLKPENVLLDDAGHVRLSDMGLAIEIKEGENKTRGYAGTPGFMAPELLKNEDYDFSVDYFTLGVTIYEMLEAKGPFRRRGEKVENKEVTRRILHDPVSYSDKFSAAAREACEGLLAKDPQSRLGFRGNDCGQLKAQPFFKGINWGRLEAGLVPPPFVPDPRRVYAKDLADVGAFSTVKGVELDGGDAALFDAFASGTVPIPWQEELIETGVFDELNVWGAPGTLPPDLDPSAAGGAGGGKSSTCRLL
SIO_010081: GRK1
subclass of: SO_0000673
so part of: GRK1
location: complement(join(771703..771998,772969..773170,773834..773958,774415..774498,775649..775806,776880..777007,777784..778070,780656..781127))
location: region:771703-781127:-1
so has part: feature:780656-781127:-1:exon
so has part: feature:777784-778070:-1:exon
so has part: feature:776880-777007:-1:exon
so has part: feature:775649-775806:-1:exon
so has part: feature:774415-774498:-1:exon
so has part: feature:773834-773958:-1:exon
so has part: feature:772969-773170:-1:exon
so has part: feature:771703-771998:-1:exon

XP_032940180.1
type: Protein
SIO_000068: ncbiprotein

position:771703:-1
position: 771703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:780656-781127:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:777784-778070:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:776880-777007:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:775649-775806:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:774415-774498:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:773834-773958:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:772969-773170:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:771703-771998:-1:exon

ATP1B2
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: ATP1B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 787277..800633
location: region:787277-800633:1
so has part: feature:787277-800633:1:exon
subclass of: SO_0000010

117009948
type: Gene
SIO_000068: ncbigene

position:787277:1
position: 787277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:800633:1
position: 800633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:787277-800633:1:exon

ATP1B2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ATP1B2
product: ATPase Na+/K+ transporting subunit beta 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084330.2
SIO_010081: ATP1B2
subclass of: SO_0000673
so part of: ATP1B2
location: join(787277..787496,791014..791142,793204..793308,794948..795153,796187..796243,796705..796728,797640..797657,798602..798700,800295..800633)
location: region:787277-800633:1
so has part: feature:787277-787496:1:exon
so has part: feature:791014-791142:1:exon
so has part: feature:793204-793308:1:exon
so has part: feature:794948-795153:1:exon
so has part: feature:796187-796243:1:exon
so has part: feature:796705-796728:1:exon
so has part: feature:797640-797657:1:exon
so has part: feature:798602-798700:1:exon
so has part: feature:800295-800633:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:787277-787496:1:exon

position:787496:1
position: 787496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:791014-791142:1:exon

position:791014:1
position: 791014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:791142:1
position: 791142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:793204-793308:1:exon

position:793204:1
position: 793204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793308:1
position: 793308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:794948-795153:1:exon

position:794948:1
position: 794948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:795153:1
position: 795153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:796187-796243:1:exon

position:796187:1
position: 796187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:796243:1
position: 796243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:796705-796728:1:exon

position:796705:1
position: 796705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:796728:1
position: 796728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:797640-797657:1:exon

position:797640:1
position: 797640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:797657:1
position: 797657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:798602-798700:1:exon

position:798602:1
position: 798602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:798700:1
position: 798700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:800295-800633:1:exon

position:800295:1
position: 800295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATP1B2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ATP1B2
product: ATPase Na+/K+ transporting subunit beta 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084331.2
SIO_010081: ATP1B2
subclass of: SO_0000673
so part of: ATP1B2
location: join(787290..787496,791014..791142,793204..793308,794948..795153,796187..796243,798602..798700,800295..800633)
location: region:787290-800633:1
so has part: feature:787290-787496:1:exon
so has part: feature:791014-791142:1:exon
so has part: feature:793204-793308:1:exon
so has part: feature:794948-795153:1:exon
so has part: feature:796187-796243:1:exon
so has part: feature:798602-798700:1:exon
so has part: feature:800295-800633:1:exon

position:787290:1
position: 787290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:787290-787496:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:791014-791142:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:793204-793308:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:794948-795153:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:796187-796243:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:798602-798700:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:800295-800633:1:exon

ATP1B2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ATP1B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/potassium-transporting ATPase subunit beta-2 isoform X1
translation: MARDKEKRSCGQVVAEWRAFLWDPRTRQFLGRTGSSWGLILLFYLVFYGFLAGLFALTMWVMLQSVDPHVPKYQDRLLTPGLMIRPCTEGLDVTFNVSQSQTWLQYVRALHQFLEPYNDSVQAARNAACPAGRYNEQPDDSVPNYPKRACRFNRSLLGPCAGLEPHGDYGYGNGQPCVLVKVNRVINFFPGKNKSINIVCAAKRPRTKGDLGHSATTREEDAALLGPLQLFPPNGSIDLMYFPYYGKRVHVNYTQPVVAVQFPNATANVDHHVECRLNAAGLRTDDERDKFAGRVAFRLRINRE
SIO_010081: ATP1B2
subclass of: SO_0000673
so part of: ATP1B2
location: join(787385..787496,791014..791142,793204..793308,794948..795153,796187..796243,796705..796728,797640..797657,798602..798700,800295..800459)
location: region:787385-800459:1
so has part: feature:787385-787496:1:exon
so has part: feature:791014-791142:1:exon
so has part: feature:793204-793308:1:exon
so has part: feature:794948-795153:1:exon
so has part: feature:796187-796243:1:exon
so has part: feature:796705-796728:1:exon
so has part: feature:797640-797657:1:exon
so has part: feature:798602-798700:1:exon
so has part: feature:800295-800459:1:exon

XP_032940221.1
type: Protein
SIO_000068: ncbiprotein

position:787385:1
position: 787385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:800459:1
position: 800459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:787385-787496:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:791014-791142:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:793204-793308:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:794948-795153:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:796187-796243:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:796705-796728:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:797640-797657:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:798602-798700:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:800295-800459:1:exon

ATP1B2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ATP1B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/potassium-transporting ATPase subunit beta-2 isoform X2
translation: MARDKEKRSCGQVVAEWRAFLWDPRTRQFLGRTGSSWGLILLFYLVFYGFLAGLFALTMWVMLQSVDPHVPKYQDRLLTPGLMIRPCTEGLDVTFNVSQSQTWLQYVRALHQFLEPYNDSVQAARNAACPAGRYNEQPDDSVPNYPKRACRFNRSLLGPCAGLEPHGDYGYGNGQPCVLVKVNRVINFFPGKNKSINIVCAAKREEDAALLGPLQLFPPNGSIDLMYFPYYGKRVHVNYTQPVVAVQFPNATANVDHHVECRLNAAGLRTDDERDKFAGRVAFRLRINRE
SIO_010081: ATP1B2
subclass of: SO_0000673
so part of: ATP1B2
location: join(787385..787496,791014..791142,793204..793308,794948..795153,796187..796243,798602..798700,800295..800459)
location: region:787385-800459:1
so has part: feature:787385-787496:1:exon
so has part: feature:791014-791142:1:exon
so has part: feature:793204-793308:1:exon
so has part: feature:794948-795153:1:exon
so has part: feature:796187-796243:1:exon
so has part: feature:798602-798700:1:exon
so has part: feature:800295-800459:1:exon

XP_032940222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:787385-787496:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:791014-791142:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:793204-793308:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:794948-795153:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:796187-796243:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:798602-798700:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:800295-800459:1:exon

TP53
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: TP53
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(806610..819005)
location: region:806610-819005:-1
so has part: feature:806610-819005:-1:exon
subclass of: SO_0000010

117009902
type: Gene
SIO_000068: ncbigene

position:806610:-1
position: 806610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819005:-1
position: 819005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:806610-819005:-1:exon

TP53
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: TP53
product: tumor protein p53
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084255.1
SIO_010081: TP53
subclass of: SO_0000673
so part of: TP53
location: complement(join(806610..807034,807605..807690,809083..809162,810012..810133,811737..811846,813290..813402,814607..814793,817595..817738,817784..817819,818779..818824,818898..819005))
location: region:806610-819005:-1
so has part: feature:818898-819005:-1:exon
so has part: feature:818779-818824:-1:exon
so has part: feature:817784-817819:-1:exon
so has part: feature:817595-817738:-1:exon
so has part: feature:814607-814793:-1:exon
so has part: feature:813290-813402:-1:exon
so has part: feature:811737-811846:-1:exon
so has part: feature:810012-810133:-1:exon
so has part: feature:809083-809162:-1:exon
so has part: feature:807605-807690:-1:exon
so has part: feature:806610-807034:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:818898-819005:-1:exon

position:818898:-1
position: 818898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:818779-818824:-1:exon

position:818779:-1
position: 818779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818824:-1
position: 818824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:817784-817819:-1:exon

position:817784:-1
position: 817784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817819:-1
position: 817819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:817595-817738:-1:exon

position:817595:-1
position: 817595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817738:-1
position: 817738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:814607-814793:-1:exon

position:814607:-1
position: 814607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:814793:-1
position: 814793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:813290-813402:-1:exon

position:813290:-1
position: 813290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:813402:-1
position: 813402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:811737-811846:-1:exon

position:811737:-1
position: 811737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:811846:-1
position: 811846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:810012-810133:-1:exon

position:810012:-1
position: 810012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:810133:-1
position: 810133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:809083-809162:-1:exon

position:809083:-1
position: 809083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:809162:-1
position: 809162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:807605-807690:-1:exon

position:807605:-1
position: 807605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:807690:-1
position: 807690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:806610-807034:-1:exon

position:807034:-1
position: 807034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TP53
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: TP53
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cellular tumor antigen p53
translation: MAEDLEPLLEGEGFLDWWKTLPDNIGSIPEETLEWEDLTTLGVSPEGPPPEPPRQVEPPAPPPAPVVPSTEDYGGEHDFRLEFRETGTAKSVTCTYSPVLNKLYCRLAKPCPVQVRVGVPPPPGALVRAVAVYKKSEHVAEVVRRCPHHERCGGGKDGNAPAQHLIWVEGNPKARYQDDETTKRHSVAVPYEPPQVGSECTTVLYNFMCNSSCMGGMNRRPILAILTLEGPGGQTLGRRCFEVRVCACPGRDRRLEEENQRKRGGAKGGAKRALPPPAEAPEGSKKKVLEPDNEIFCLQVRGRKRFEMLQMINEALEAKERGETAPKKTKGRRPRGEGPVPRGKKLLVKVESGDSD
SIO_010081: TP53
subclass of: SO_0000673
so part of: TP53
location: complement(join(806947..807034,807605..807690,809083..809162,810012..810133,811737..811846,813290..813402,814607..814793,817595..817738,817784..817819,818779..818824,818898..818956))
location: region:806947-818956:-1
so has part: feature:818898-818956:-1:exon
so has part: feature:818779-818824:-1:exon
so has part: feature:817784-817819:-1:exon
so has part: feature:817595-817738:-1:exon
so has part: feature:814607-814793:-1:exon
so has part: feature:813290-813402:-1:exon
so has part: feature:811737-811846:-1:exon
so has part: feature:810012-810133:-1:exon
so has part: feature:809083-809162:-1:exon
so has part: feature:807605-807690:-1:exon
so has part: feature:806947-807034:-1:exon

XP_032940146.1
type: Protein
SIO_000068: ncbiprotein

position:806947:-1
position: 806947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818956:-1
position: 818956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:818898-818956:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:818779-818824:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:817784-817819:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:817595-817738:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:814607-814793:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:813290-813402:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:811737-811846:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:810012-810133:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:809083-809162:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:807605-807690:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:806947-807034:-1:exon

LOC117009903
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009903
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 819387..825282
location: region:819387-825282:1
so has part: feature:819387-825282:1:exon
subclass of: SO_0000010

117009903
type: Gene
SIO_000068: ncbigene

position:819387:1
position: 819387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:825282:1
position: 825282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:819387-825282:1:exon

LOC117009903
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009903
product: monocarboxylate transporter 13-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 44% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_042780119.1
SIO_010081: LOC117009903
subclass of: SO_0000673
so part of: LOC117009903
location: join(819387..819468,821669..821878,822795..822938,823765..824514,825128..825282)
location: region:819387-825282:1
so has part: feature:819387-819468:1:exon
so has part: feature:821669-821878:1:exon
so has part: feature:822795-822938:1:exon
so has part: feature:823765-824514:1:exon
so has part: feature:825128-825282:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:819387-819468:1:exon

position:819468:1
position: 819468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:821669-821878:1:exon

position:821669:1
position: 821669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:821878:1
position: 821878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:822795-822938:1:exon

position:822795:1
position: 822795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:822938:1
position: 822938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:823765-824514:1:exon

position:823765:1
position: 823765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:824514:1
position: 824514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:825128-825282:1:exon

position:825128:1
position: 825128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117009903
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009903
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: monocarboxylate transporter 13-like
translation: MSPKTPSGPLRTPQNSPGPPKIPPGSPVSPVPAVALRWPFPPGALPALSAAFLQVALVSGAVRALGLCLPPLGGAFGAPARAAALVGSCPLAALQLGGPLAAALSDRFGPRGVAMVGGAMAGAGLFLGAFATRLEHLYLSLGGLTGLGWSLSFTPALGAVSRWFPQRRTLATGLAVSGAAVSGLALTPLVPLALDAYGWRGALLLLAAVSLHLVAAAALLRPPRSVPEPPEPPEPPGERRGLLRLLRHGPFLRYAAAFALLDAGYYVPFVHGAARALELGHDGRRAGAVVAAMAVLDGGGRVAAGWLAARPAAAPLRHLAAWAALAGSAAWLLPLGRSFGALAALAAAYGVCAGAVVPLQFAGVAEVVGAGRAALGIGLMQMFESVGSLLGAPLAGWLRDVTGDFTASFLAAGAFLVASSLLILTLPPAPPEPPPGSPRAALEPPV
SIO_010081: LOC117009903
subclass of: SO_0000673
so part of: LOC117009903
location: join(819387..819468,821669..821878,822795..822938,823765..824514,825128..825282)
location: region:819387-825282:1
so has part: feature:819387-819468:1:exon
so has part: feature:821669-821878:1:exon
so has part: feature:822795-822938:1:exon
so has part: feature:823765-824514:1:exon
so has part: feature:825128-825282:1:exon

XP_042636053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:819387-819468:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:821669-821878:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:822795-822938:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:823765-824514:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:825128-825282:1:exon

ACAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: ACAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(826023..855445)
location: region:826023-855445:-1
so has part: feature:826023-855445:-1:exon
subclass of: SO_0000010

117009951
type: Gene
SIO_000068: ncbigene

position:826023:-1
position: 826023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:855445:-1
position: 855445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:826023-855445:-1:exon

ACAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ACAP1
product: ArfGAP with coiled-coil, ankyrin repeat and PH domains 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
transcript id: XM_033084334.1
SIO_010081: ACAP1
subclass of: SO_0000673
so part of: ACAP1
location: complement(join(826023..826178,827008..827057,827195..827305,831082..831191,831988..832172,832752..832890,834320..834414,835598..835667,837178..837350,837749..837854,839456..839556,841097..841148,842641..842753,843755..843829,844325..844420,844697..844741,845415..845598,847321..847379,847938..847991,850382..850501,852190..852247,855269..855445))
location: region:826023-855445:-1
so has part: feature:855269-855445:-1:exon
so has part: feature:852190-852247:-1:exon
so has part: feature:850382-850501:-1:exon
so has part: feature:847938-847991:-1:exon
so has part: feature:847321-847379:-1:exon
so has part: feature:845415-845598:-1:exon
so has part: feature:844697-844741:-1:exon
so has part: feature:844325-844420:-1:exon
so has part: feature:843755-843829:-1:exon
so has part: feature:842641-842753:-1:exon
so has part: feature:841097-841148:-1:exon
so has part: feature:839456-839556:-1:exon
so has part: feature:837749-837854:-1:exon
so has part: feature:837178-837350:-1:exon
so has part: feature:835598-835667:-1:exon
so has part: feature:834320-834414:-1:exon
so has part: feature:832752-832890:-1:exon
so has part: feature:831988-832172:-1:exon
so has part: feature:831082-831191:-1:exon
so has part: feature:827195-827305:-1:exon
so has part: feature:827008-827057:-1:exon
so has part: feature:826023-826178:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:855269-855445:-1:exon

position:855269:-1
position: 855269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:852190-852247:-1:exon

position:852190:-1
position: 852190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:852247:-1
position: 852247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:850382-850501:-1:exon

position:850382:-1
position: 850382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850501:-1
position: 850501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:847938-847991:-1:exon

position:847938:-1
position: 847938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:847991:-1
position: 847991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:847321-847379:-1:exon

position:847321:-1
position: 847321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:847379:-1
position: 847379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:845415-845598:-1:exon

position:845415:-1
position: 845415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845598:-1
position: 845598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:844697-844741:-1:exon

position:844697:-1
position: 844697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844741:-1
position: 844741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:844325-844420:-1:exon

position:844325:-1
position: 844325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844420:-1
position: 844420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:843755-843829:-1:exon

position:843755:-1
position: 843755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:843829:-1
position: 843829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:842641-842753:-1:exon

position:842641:-1
position: 842641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842753:-1
position: 842753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:841097-841148:-1:exon

position:841097:-1
position: 841097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:841148:-1
position: 841148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:839456-839556:-1:exon

position:839456:-1
position: 839456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:839556:-1
position: 839556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:837749-837854:-1:exon

position:837749:-1
position: 837749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:837854:-1
position: 837854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:837178-837350:-1:exon

position:837178:-1
position: 837178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:837350:-1
position: 837350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:835598-835667:-1:exon

position:835598:-1
position: 835598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:835667:-1
position: 835667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:834320-834414:-1:exon

position:834320:-1
position: 834320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:834414:-1
position: 834414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:832752-832890:-1:exon

position:832752:-1
position: 832752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:832890:-1
position: 832890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:831988-832172:-1:exon

position:831988:-1
position: 831988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:832172:-1
position: 832172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:831082-831191:-1:exon

position:831082:-1
position: 831082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:831191:-1
position: 831191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:827195-827305:-1:exon

position:827195:-1
position: 827195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:827305:-1
position: 827305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:827008-827057:-1:exon

position:827008:-1
position: 827008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:827057:-1
position: 827057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:826023-826178:-1:exon

position:826178:-1
position: 826178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ACAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ACAP1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1
translation: MTVKLDFEECLRDSPWFRAAVEEAESDAAELETHLEKVLKLCSAVLEAGRVLEGSSRAFSAGLRELAGTPRGDPLVREALEKFCDSLEQMMDSHEELRSCTQSALRRHLQPLLRDSLRALRAAGRERARAAELLQGALQHHAEVPRRRPLEAQEAAAALGGARGVARARGLDYILQLSVVQDRKKTEILQFVLALLEAQAAFFSRGHQGATATRDYRGHLGGQLEREQLEGARRRRDLEQRHRLLLQQDLSQEEVGVASGEAGPRAPPMEGYLYKRASNAFRTWSRRWFFIQSNQLLYLKRARDPPTVVVEDLRLCTVKPCPELERRFCFEVVSPSKSCVLQADSGGEQRRWVSAVQNGIACAYSQGTPKTQPPSSSSLPGSPPSPPPVLGAILGLEGNGSCCDCREPCPEWASVNLGITLCIQCSGIHRSLGVHFSKVRSLTLDSWEPELVKLMCALGNRALNGIYEARVEEMGVKRPPPGCSRAQRESWIRAKYVEKKFLXGRGRTRPQAPPTPSRPRPQPRPRLPRWPPPPPEAAEPEGAPCLHPGALLFWASGRRRLATMADALAHGADPGWVNAAEGNRTPLLEAVAANSLLACEFLLQNGASVNQSDSHGRGPLHHATVLGHTGLACLFLKRGADVNAVDADGRDPLSIAMDSANADIVTLLRLAKMRELEVAQGQSGDDTYLDIFRDISLLASDHPEKLARAPPPKHSTL
SIO_010081: ACAP1
subclass of: SO_0000673
so part of: ACAP1
location: complement(join(826075..826178,827008..827057,827195..827305,831082..831191,831988..832172,832752..832890,834320..834414,835598..835667,837178..837350,837749..837854,839456..839556,841097..841148,842641..842753,843755..843829,844325..844420,844697..844741,845415..845598,847321..847379,847938..847991,850382..850501,852190..852247,855269..855321))
location: region:826075-855321:-1
so has part: feature:855269-855321:-1:exon
so has part: feature:852190-852247:-1:exon
so has part: feature:850382-850501:-1:exon
so has part: feature:847938-847991:-1:exon
so has part: feature:847321-847379:-1:exon
so has part: feature:845415-845598:-1:exon
so has part: feature:844697-844741:-1:exon
so has part: feature:844325-844420:-1:exon
so has part: feature:843755-843829:-1:exon
so has part: feature:842641-842753:-1:exon
so has part: feature:841097-841148:-1:exon
so has part: feature:839456-839556:-1:exon
so has part: feature:837749-837854:-1:exon
so has part: feature:837178-837350:-1:exon
so has part: feature:835598-835667:-1:exon
so has part: feature:834320-834414:-1:exon
so has part: feature:832752-832890:-1:exon
so has part: feature:831988-832172:-1:exon
so has part: feature:831082-831191:-1:exon
so has part: feature:827195-827305:-1:exon
so has part: feature:827008-827057:-1:exon
so has part: feature:826075-826178:-1:exon

XP_032940225.1
type: Protein
SIO_000068: ncbiprotein

position:826075:-1
position: 826075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:855321:-1
position: 855321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:855269-855321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:852190-852247:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:850382-850501:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:847938-847991:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:847321-847379:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:845415-845598:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:844697-844741:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:844325-844420:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:843755-843829:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:842641-842753:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:841097-841148:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:839456-839556:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:837749-837854:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:837178-837350:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:835598-835667:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:834320-834414:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:832752-832890:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:831988-832172:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:831082-831191:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:827195-827305:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:827008-827057:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:826075-826178:-1:exon

NEURL4
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: NEURL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 857494..>884821
location: region:857494-884821:1
so has part: feature:857494-884821:1:exon
subclass of: SO_0000010

117009904
type: Gene
SIO_000068: ncbigene

position:857494:1
position: 857494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:884821:1
position: 884821
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:857494-884821:1:exon

NEURL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NEURL4
product: neuralized E3 ubiquitin protein ligase 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 10 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084258.1
SIO_010081: NEURL4
subclass of: SO_0000673
so part of: NEURL4
location: join(857494..857718,864086..864533,865962..866021,867164..867327,870103..870214,874597..874685,876328..876400,879447..879729,881140..881321,882378..882463,882554..882716,884643..>884821)
location: region:857494-884821:1
so has part: feature:857494-857718:1:exon
so has part: feature:864086-864533:1:exon
so has part: feature:865962-866021:1:exon
so has part: feature:867164-867327:1:exon
so has part: feature:870103-870214:1:exon
so has part: feature:874597-874685:1:exon
so has part: feature:876328-876400:1:exon
so has part: feature:879447-879729:1:exon
so has part: feature:881140-881321:1:exon
so has part: feature:882378-882463:1:exon
so has part: feature:882554-882716:1:exon
so has part: feature:884643-884821:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:857494-857718:1:exon

position:857718:1
position: 857718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:864086-864533:1:exon

position:864086:1
position: 864086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:864533:1
position: 864533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:865962-866021:1:exon

position:865962:1
position: 865962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:866021:1
position: 866021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:867164-867327:1:exon

position:867164:1
position: 867164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:867327:1
position: 867327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:870103-870214:1:exon

position:870103:1
position: 870103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:870214:1
position: 870214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:874597-874685:1:exon

position:874597:1
position: 874597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874685:1
position: 874685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:876328-876400:1:exon

position:876328:1
position: 876328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:876400:1
position: 876400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:879447-879729:1:exon

position:879447:1
position: 879447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879729:1
position: 879729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:881140-881321:1:exon

position:881140:1
position: 881140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:881321:1
position: 881321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:882378-882463:1:exon

position:882378:1
position: 882378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:882463:1
position: 882463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:882554-882716:1:exon

position:882554:1
position: 882554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:882716:1
position: 882716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:884643-884821:1:exon

position:884643:1
position: 884643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NEURL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: NEURL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuralized-like protein 4
translation: MAAPGPGGGSSGGASGGAPGPPPELHPRCGRLVSLSQGGRSAARAQPGQEFNHGLVLSREPLRPGRVFTVRIDRKVNSWSGSIEVGVTALDPAELDFPSSATGLRGGSWVVSGCSVLRDGRSLREDFGPDLDALAEGDRVGVQATAGGELRLWVNGRDWGVAAAGLPPRVWAVVDLYGKCTQVTVVAPEVAPVATGMDAAATESGELPAALPGMEEEGSESGALGAPPQPRPDKFPDSLEPPGGAPSLTNEALLFHEKCGALIKLSNGHKTAERRRPLDEFNNGVVLTNRPLRDGEMFEIRIDKLVDKWSGSIEIGVTAHNPNSLEYPATMTNLRSGTIMMSGCGILTNGKGTRREYCEFSLDELQEGDHIGLTRKANNALHFYINGVDQGVATTLTPQQVYGVVDLYGMAVKVTIVHNHNHSDRLRRNNAILRALSPEGTLGTPRRPPPATATNPAPPPRLLFHPNCGQKAAVVNEGRTALRPHATDDFNHGVVLSARPLGDNELFQVRLDKMVDKWAGSIEIGVTTHNPAYLQLPSTMTNLRSGTWMMTGNGVMHNGTTVLDEYGHNLDRLKAGDTVGVVRRDDGTLHFFVNGAPQGPAAWNVPPNVYAVVDLYGQAAQATIVEEGEVAALSGDGSEGDSAGDSPDSATPGTSPSDLRFHRLHGANAVITNGGRTALRQNCRSEFN
SIO_010081: NEURL4
subclass of: SO_0000673
so part of: NEURL4
location: join(857494..857718,864086..864533,865962..866021,867164..867327,870103..870214,874597..874685,876328..876400,879447..879729,881140..881321,882378..882463,882554..882716,884643..>884821)
location: region:857494-884821:1
so has part: feature:857494-857718:1:exon
so has part: feature:864086-864533:1:exon
so has part: feature:865962-866021:1:exon
so has part: feature:867164-867327:1:exon
so has part: feature:870103-870214:1:exon
so has part: feature:874597-874685:1:exon
so has part: feature:876328-876400:1:exon
so has part: feature:879447-879729:1:exon
so has part: feature:881140-881321:1:exon
so has part: feature:882378-882463:1:exon
so has part: feature:882554-882716:1:exon
so has part: feature:884643-884821:1:exon

XP_032940149.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:857494-857718:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:864086-864533:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:865962-866021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:867164-867327:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:870103-870214:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:874597-874685:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:876328-876400:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:879447-879729:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:881140-881321:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:882378-882463:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:882554-882716:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:884643-884821:1:exon

LOC117009905
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009905
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(886581..897015)
location: region:886581-897015:-1
so has part: feature:886581-897015:-1:exon
subclass of: SO_0000010

117009905
type: Gene
SIO_000068: ncbigene

position:886581:-1
position: 886581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:897015:-1
position: 897015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:886581-897015:-1:exon

LOC117009905
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009905
product: COP9 signalosome complex subunit 6-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084259.1
SIO_010081: LOC117009905
subclass of: SO_0000673
so part of: LOC117009905
location: complement(join(886581..886721,888692..888739,888879..888941,890476..890564,893063..893194,894127..894252,896850..897015))
location: region:886581-897015:-1
so has part: feature:896850-897015:-1:exon
so has part: feature:894127-894252:-1:exon
so has part: feature:893063-893194:-1:exon
so has part: feature:890476-890564:-1:exon
so has part: feature:888879-888941:-1:exon
so has part: feature:888692-888739:-1:exon
so has part: feature:886581-886721:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:896850-897015:-1:exon

position:896850:-1
position: 896850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:894127-894252:-1:exon

position:894127:-1
position: 894127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:894252:-1
position: 894252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:893063-893194:-1:exon

position:893063:-1
position: 893063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893194:-1
position: 893194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:890476-890564:-1:exon

position:890476:-1
position: 890476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:890564:-1
position: 890564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:888879-888941:-1:exon

position:888879:-1
position: 888879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888941:-1
position: 888941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:888692-888739:-1:exon

position:888692:-1
position: 888692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888739:-1
position: 888739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:886581-886721:-1:exon

position:886721:-1
position: 886721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009905
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COP9 signalosome complex subunit 6-like
translation: MPREGPKMAAAAPGGGGSCGGGAGAGGGPGSTGNGTGSAGNNGGMEVDGAGVAQVMAGGVTGSVSVALHPLVILNISDHWIRLRSQEGRNGQVIGALIGRQEGRNIEVMNSFELLAHGSGGHVLIDKEYYYTKEEQFKQVFKDLEFLGWYTTGGPPEPADIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVFESVIDIINGEATMLFAELPYTLATEEAERIGVDHVARMTATGGGENSTGET
SIO_010081: LOC117009905
subclass of: SO_0000673
so part of: LOC117009905
location: complement(join(886596..886721,888692..888739,888879..888941,890476..890564,893063..893194,894127..894252,896850..897000))
location: region:886596-897000:-1
so has part: feature:896850-897000:-1:exon
so has part: feature:894127-894252:-1:exon
so has part: feature:893063-893194:-1:exon
so has part: feature:890476-890564:-1:exon
so has part: feature:888879-888941:-1:exon
so has part: feature:888692-888739:-1:exon
so has part: feature:886596-886721:-1:exon

XP_032940150.1
type: Protein
SIO_000068: ncbiprotein

position:886596:-1
position: 886596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:897000:-1
position: 897000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:896850-897000:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:894127-894252:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:893063-893194:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:890476-890564:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:888879-888941:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:888692-888739:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:886596-886721:-1:exon

CTDNEP1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: CTDNEP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(898126..910669)
location: region:898126-910669:-1
so has part: feature:898126-910669:-1:exon
subclass of: SO_0000010

117009949
type: Gene
SIO_000068: ncbigene

position:898126:-1
position: 898126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:910669:-1
position: 910669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:898126-910669:-1:exon

CTDNEP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CTDNEP1
product: CTD nuclear envelope phosphatase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033084332.1
SIO_010081: CTDNEP1
subclass of: SO_0000673
so part of: CTDNEP1
location: complement(join(898126..898262,899647..899731,900811..900922,901972..902088,902715..902786,904848..904966,906279..906345,910515..910669))
location: region:898126-910669:-1
so has part: feature:910515-910669:-1:exon
so has part: feature:906279-906345:-1:exon
so has part: feature:904848-904966:-1:exon
so has part: feature:902715-902786:-1:exon
so has part: feature:901972-902088:-1:exon
so has part: feature:900811-900922:-1:exon
so has part: feature:899647-899731:-1:exon
so has part: feature:898126-898262:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:910515-910669:-1:exon

position:910515:-1
position: 910515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:906279-906345:-1:exon

position:906279:-1
position: 906279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:906345:-1
position: 906345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:904848-904966:-1:exon

position:904848:-1
position: 904848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:904966:-1
position: 904966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:902715-902786:-1:exon

position:902715:-1
position: 902715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:902786:-1
position: 902786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:901972-902088:-1:exon

position:901972:-1
position: 901972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:902088:-1
position: 902088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:900811-900922:-1:exon

position:900811:-1
position: 900811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900922:-1
position: 900922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:899647-899731:-1:exon

position:899647:-1
position: 899647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899731:-1
position: 899731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:898126-898262:-1:exon

position:898262:-1
position: 898262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CTDNEP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CTDNEP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CTD nuclear envelope phosphatase 1
translation: MMRSQCLLGLRSFVAFAAKLWSFVLYLLRRQARTVIQYQTVRYDVLPLSPISRNRLNQVKRKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGCAVADKLDNNRSILNRRYYRQHCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPGDTALLNLLPMLDALRFTADVRSVLSRNLHQHRLW
SIO_010081: CTDNEP1
subclass of: SO_0000673
so part of: CTDNEP1
location: complement(join(898202..898262,899647..899731,900811..900922,901972..902088,902715..902786,904848..904966,906279..906345,910515..910616))
location: region:898202-910616:-1
so has part: feature:910515-910616:-1:exon
so has part: feature:906279-906345:-1:exon
so has part: feature:904848-904966:-1:exon
so has part: feature:902715-902786:-1:exon
so has part: feature:901972-902088:-1:exon
so has part: feature:900811-900922:-1:exon
so has part: feature:899647-899731:-1:exon
so has part: feature:898202-898262:-1:exon

XP_032940223.1
type: Protein
SIO_000068: ncbiprotein

position:898202:-1
position: 898202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:910616:-1
position: 910616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:910515-910616:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:906279-906345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:904848-904966:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:902715-902786:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:901972-902088:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:900811-900922:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:899647-899731:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:898202-898262:-1:exon

ELP5
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: ELP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(916351..922524)
location: region:916351-922524:-1
so has part: feature:916351-922524:-1:exon
subclass of: SO_0000010

117009938
type: Gene
SIO_000068: ncbigene

position:916351:-1
position: 916351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:922524:-1
position: 922524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:916351-922524:-1:exon

ELP5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ELP5
product: elongator acetyltransferase complex subunit 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033084298.1
SIO_010081: ELP5
subclass of: SO_0000673
so part of: ELP5
location: complement(join(916351..916447,919854..920094,921590..921670,922211..922271,922408..922524))
location: region:916351-922524:-1
so has part: feature:922408-922524:-1:exon
so has part: feature:922211-922271:-1:exon
so has part: feature:921590-921670:-1:exon
so has part: feature:919854-920094:-1:exon
so has part: feature:916351-916447:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:922408-922524:-1:exon

position:922408:-1
position: 922408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:922211-922271:-1:exon

position:922211:-1
position: 922211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:922271:-1
position: 922271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:921590-921670:-1:exon

position:921590:-1
position: 921590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:921670:-1
position: 921670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:919854-920094:-1:exon

position:919854:-1
position: 919854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:920094:-1
position: 920094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:916351-916447:-1:exon

position:916447:-1
position: 916447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ELP5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ELP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elongator complex protein 5
translation: MAAATSVRDVIGRRRATMLEALGGGGLLLVRDTAESEGRSLLRALVSEAVARAEQVLVVLLEVPREQFQEGLSPEVRERLHFWDLFGDPLGWLGRGPPPCPSPSGDPPRPSPSGGSWGVSPPPPGVSWCWTR
SIO_010081: ELP5
subclass of: SO_0000673
so part of: ELP5
location: complement(join(919932..920094,921590..921670,922211..922271,922408..922501))
location: region:919932-922501:-1
so has part: feature:922408-922501:-1:exon
so has part: feature:922211-922271:-1:exon
so has part: feature:921590-921670:-1:exon
so has part: feature:919932-920094:-1:exon

XP_032940189.1
type: Protein
SIO_000068: ncbiprotein

position:919932:-1
position: 919932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:922501:-1
position: 922501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:922408-922501:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:922211-922271:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:921590-921670:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:919932-920094:-1:exon

CLDN7
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: CLDN7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(923392..931591)
location: region:923392-931591:-1
so has part: feature:923392-931591:-1:exon
subclass of: SO_0000010

117009935
type: Gene
SIO_000068: ncbigene

position:923392:-1
position: 923392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:931591:-1
position: 931591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:923392-931591:-1:exon

CLDN7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CLDN7
product: claudin 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084296.1
SIO_010081: CLDN7
subclass of: SO_0000673
so part of: CLDN7
location: complement(join(923392..923575,925267..925351,927373..927537,931058..931591))
location: region:923392-931591:-1
so has part: feature:931058-931591:-1:exon
so has part: feature:927373-927537:-1:exon
so has part: feature:925267-925351:-1:exon
so has part: feature:923392-923575:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:931058-931591:-1:exon

position:931058:-1
position: 931058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:927373-927537:-1:exon

position:927373:-1
position: 927373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:927537:-1
position: 927537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:925267-925351:-1:exon

position:925267:-1
position: 925267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:925351:-1
position: 925351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:923392-923575:-1:exon

position:923575:-1
position: 923575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CLDN7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CLDN7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: claudin-7
translation: MAHGGLQALGLALAVAGWAALVAAAALPQWEVSSYAGDNIITALATMKGLWMSCVSTSTGQLQCKSYDSVLALPGHLQATRALMVVAGVLGPLALGAAVAGMKCTRCGGDDAQKKAKVAAAGGAIFILAGLLALVACSWYGHRIVTNFYDVTVPVNYKFEFGSALFLGWAGSALALLGGSLLASSGCSCGGGGARAASRGYPRTKATPPRPPSSREYV
SIO_010081: CLDN7
subclass of: SO_0000673
so part of: CLDN7
location: complement(join(923392..923575,925267..925351,927373..927537,931058..931280))
location: region:923392-931280:-1
so has part: feature:931058-931280:-1:exon
so has part: feature:927373-927537:-1:exon
so has part: feature:925267-925351:-1:exon
so has part: feature:923392-923575:-1:exon

XP_032940187.1
type: Protein
SIO_000068: ncbiprotein

position:931280:-1
position: 931280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:931058-931280:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:927373-927537:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:925267-925351:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:923392-923575:-1:exon

MED11
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: MED11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(938139..942031)
location: region:938139-942031:-1
so has part: feature:938139-942031:-1:exon
subclass of: SO_0000010

117009932
type: Gene
SIO_000068: ncbigene

position:938139:-1
position: 938139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:942031:-1
position: 942031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:938139-942031:-1:exon

MED11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: MED11
product: mediator complex subunit 11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033084291.1
SIO_010081: MED11
subclass of: SO_0000673
so part of: MED11
location: complement(join(938139..938342,940828..940958,941612..942031))
location: region:938139-942031:-1
so has part: feature:941612-942031:-1:exon
so has part: feature:940828-940958:-1:exon
so has part: feature:938139-938342:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:941612-942031:-1:exon

position:941612:-1
position: 941612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:940828-940958:-1:exon

position:940828:-1
position: 940828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940958:-1
position: 940958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:938139-938342:-1:exon

position:938342:-1
position: 938342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MED11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: MED11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 11 isoform X1
translation: MAGFGVANERLRALEELEREIGASLQSAGSVILELSKEKPQERHLDRQAAQFGAAVAKVEAELSAQIRYLTQVATGQPHEGSSYAARKSCQLALNRLDYARRRLAELARACELMLEQ
SIO_010081: MED11
subclass of: SO_0000673
so part of: MED11
location: complement(join(938205..938342,940828..940958,941612..941696))
location: region:938205-941696:-1
so has part: feature:941612-941696:-1:exon
so has part: feature:940828-940958:-1:exon
so has part: feature:938205-938342:-1:exon

XP_032940182.1
type: Protein
SIO_000068: ncbiprotein

position:938205:-1
position: 938205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:941696:-1
position: 941696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:941612-941696:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:940828-940958:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:938205-938342:-1:exon

MED11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: MED11
product: mediator complex subunit 11, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084292.1
SIO_010081: MED11
subclass of: SO_0000673
so part of: MED11
location: complement(join(938646..938752,940828..940958,941612..942031))
location: region:938646-942031:-1
so has part: feature:941612-942031:-1:exon
so has part: feature:940828-940958:-1:exon
so has part: feature:938646-938752:-1:exon

position:938646:-1
position: 938646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:941612-942031:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:940828-940958:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:938646-938752:-1:exon

position:938752:-1
position: 938752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MED11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: MED11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 11 isoform X2
translation: MAGFGVANERLRALEELEREIGASLQSAGSVILELSKEKPQERHLDRQAAQFGAAVAKVEAELSAQIRYLTQVGIFWAPSYFVLPGEFHPLRCVSHLPR
SIO_010081: MED11
subclass of: SO_0000673
so part of: MED11
location: complement(join(938669..938752,940828..940958,941612..941696))
location: region:938669-941696:-1
so has part: feature:941612-941696:-1:exon
so has part: feature:940828-940958:-1:exon
so has part: feature:938669-938752:-1:exon

XP_032940183.1
type: Protein
SIO_000068: ncbiprotein

position:938669:-1
position: 938669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:941612-941696:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:940828-940958:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:938669-938752:-1:exon

PELP1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: PELP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 942305..974502
location: region:942305-974502:1
so has part: feature:942305-974502:1:exon
subclass of: SO_0000010

117009906
type: Gene
SIO_000068: ncbigene

position:942305:1
position: 942305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:974502:1
position: 974502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:942305-974502:1:exon

PELP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PELP1
product: proline, glutamate and leucine rich protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084260.2
SIO_010081: PELP1
subclass of: SO_0000673
so part of: PELP1
location: join(942305..942442,943546..943604,944087..944192,945451..945600,947622..947693,948843..948902,950538..950688,952816..952945,954628..954715,956022..956110,958653..958766,963488..963638,965314..965440,967074..967147,968731..968940,972818..972985,973034..973252,973965..974132,974304..974502)
location: region:942305-974502:1
so has part: feature:942305-942442:1:exon
so has part: feature:943546-943604:1:exon
so has part: feature:944087-944192:1:exon
so has part: feature:945451-945600:1:exon
so has part: feature:947622-947693:1:exon
so has part: feature:948843-948902:1:exon
so has part: feature:950538-950688:1:exon
so has part: feature:952816-952945:1:exon
so has part: feature:954628-954715:1:exon
so has part: feature:956022-956110:1:exon
so has part: feature:958653-958766:1:exon
so has part: feature:963488-963638:1:exon
so has part: feature:965314-965440:1:exon
so has part: feature:967074-967147:1:exon
so has part: feature:968731-968940:1:exon
so has part: feature:972818-972985:1:exon
so has part: feature:973034-973252:1:exon
so has part: feature:973965-974132:1:exon
so has part: feature:974304-974502:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:942305-942442:1:exon

position:942442:1
position: 942442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:943546-943604:1:exon

position:943546:1
position: 943546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:943604:1
position: 943604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:944087-944192:1:exon

position:944087:1
position: 944087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:944192:1
position: 944192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:945451-945600:1:exon

position:945451:1
position: 945451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:945600:1
position: 945600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:947622-947693:1:exon

position:947622:1
position: 947622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:947693:1
position: 947693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:948843-948902:1:exon

position:948843:1
position: 948843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:948902:1
position: 948902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:950538-950688:1:exon

position:950538:1
position: 950538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:950688:1
position: 950688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:952816-952945:1:exon

position:952816:1
position: 952816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:952945:1
position: 952945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:954628-954715:1:exon

position:954628:1
position: 954628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:954715:1
position: 954715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:956022-956110:1:exon

position:956022:1
position: 956022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:956110:1
position: 956110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:958653-958766:1:exon

position:958653:1
position: 958653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:958766:1
position: 958766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:963488-963638:1:exon

position:963488:1
position: 963488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963638:1
position: 963638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:965314-965440:1:exon

position:965314:1
position: 965314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:965440:1
position: 965440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:967074-967147:1:exon

position:967074:1
position: 967074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:967147:1
position: 967147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:968731-968940:1:exon

position:968731:1
position: 968731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:968940:1
position: 968940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:972818-972985:1:exon

position:972818:1
position: 972818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:972985:1
position: 972985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:973034-973252:1:exon

position:973034:1
position: 973034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:973252:1
position: 973252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:973965-974132:1:exon

position:973965:1
position: 973965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:974132:1
position: 974132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:974304-974502:1:exon

position:974304:1
position: 974304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PELP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PELP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-, glutamic acid- and leucine-rich protein 1
translation: MAAVAAPRAPPAAPLLEALSALSALPPHRRAIPGLVRGLRDSAGTQAALGGLLSVTSARLGSMKTRFEGLCLLSLLVSESPTEAFQQHCLGWLRLLQHLLQSQDPPPTVALGVSVLRELLRFSAQLPELARDIGTNHIPGILTSLLALRPECELSTLEGIQSCLQFYPGACGSMRGKLAAHFLSRIDSDSPRLQQLACECYALLPSLGRGFSQGLRHTECWHQQLQGVLATLHGLLGALFEGCETDPLPYEGPGVPLLLPPPQDGDSGDFLTLHSRFSGLCRVLRLLLSKDFVAPVTVPVQDILDLVCRALNVTTKNLSWFGEGPLRGLVLPQLHLDVLDVLGALVLACGPRLVRWGSLLCRLFPQVLSSWSCPRDPPAGQERPYGAVRTRLYQVLELWVQVSGAASGVLQTPGPPSEALLAQLLCDISPPSEGAKLRPEPKPSAPKRPKLGEGPEGPPLHRKGEPTANSDTCAAALSALRRILLTGGPLIKEETHRVRGGIWQELLLPLALRLPLPPLPPEFLGSPFGSGRCRGGLYGVLQALLLGTPPGAAPPLSCAIRAFTQGQRDPDVQVSSLCSEFLVVANALARPWVPPLGSPPPPPAPPPPPDPSLRPLPPPNPEPAPPPPSPGGVGVPGGGGARPRRPVFVHYDKEEASDVEISLESDSDDSVVIVPKKPPLPHPAPPPPPPPPAALPPPPPPPVPPAPPPELEAAPKSPPPPTPTPPPPKAGPSPDPSPPAPPPPLQEEPPENPPEKEEEQDETTSMLADFIDCPPDDEKTPETPL
SIO_010081: PELP1
subclass of: SO_0000673
so part of: PELP1
location: join(942305..942442,943546..943604,944087..944192,945451..945600,947622..947693,948843..948902,950538..950688,952816..952945,954628..954715,956022..956110,958653..958766,963488..963638,965314..965440,967074..967147,968731..968940,972818..972985,973034..973252,973965..974132,974304..974387)
location: region:942305-974387:1
so has part: feature:942305-942442:1:exon
so has part: feature:943546-943604:1:exon
so has part: feature:944087-944192:1:exon
so has part: feature:945451-945600:1:exon
so has part: feature:947622-947693:1:exon
so has part: feature:948843-948902:1:exon
so has part: feature:950538-950688:1:exon
so has part: feature:952816-952945:1:exon
so has part: feature:954628-954715:1:exon
so has part: feature:956022-956110:1:exon
so has part: feature:958653-958766:1:exon
so has part: feature:963488-963638:1:exon
so has part: feature:965314-965440:1:exon
so has part: feature:967074-967147:1:exon
so has part: feature:968731-968940:1:exon
so has part: feature:972818-972985:1:exon
so has part: feature:973034-973252:1:exon
so has part: feature:973965-974132:1:exon
so has part: feature:974304-974387:1:exon

XP_032940151.1
type: Protein
SIO_000068: ncbiprotein

position:974387:1
position: 974387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:942305-942442:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:943546-943604:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:944087-944192:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:945451-945600:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:947622-947693:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:948843-948902:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:950538-950688:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:952816-952945:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:954628-954715:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:956022-956110:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:958653-958766:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:963488-963638:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:965314-965440:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:967074-967147:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:968731-968940:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:972818-972985:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:973034-973252:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:973965-974132:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:974304-974387:1:exon

LOC117009943
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009943
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 970020..970405
location: region:970020-970405:1
so has part: feature:970020-970405:1:exon
subclass of: SO_0000011

117009943
type: Gene
SIO_000068: ncbigene

position:970020:1
position: 970020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:970405:1
position: 970405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:970020-970405:1:exon

LOC117009943
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117009943
product: uncharacterized LOC117009943
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_004420564.1
SIO_010081: LOC117009943
subclass of: SO_0000673
so part of: LOC117009943
location: join(970020..970208,970375..970405)
location: region:970020-970405:1
so has part: feature:970020-970208:1:exon
so has part: feature:970375-970405:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:970020-970208:1:exon

position:970208:1
position: 970208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:970375-970405:1:exon

position:970375:1
position: 970375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SNAPC2
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: SNAPC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 974589..979332
location: region:974589-979332:1
so has part: feature:974589-979332:1:exon
subclass of: SO_0000010

117009942
type: Gene
SIO_000068: ncbigene

position:974589:1
position: 974589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:979332:1
position: 979332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:974589-979332:1:exon

SNAPC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SNAPC2
product: small nuclear RNA activating complex polypeptide 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084312.2
SIO_010081: SNAPC2
subclass of: SO_0000673
so part of: SNAPC2
location: join(974589..974978,976103..976210,977313..977384,977504..977732,979067..979175,979222..979332)
location: region:974589-979332:1
so has part: feature:974589-974978:1:exon
so has part: feature:976103-976210:1:exon
so has part: feature:977313-977384:1:exon
so has part: feature:977504-977732:1:exon
so has part: feature:979067-979175:1:exon
so has part: feature:979222-979332:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:974589-974978:1:exon

position:974978:1
position: 974978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:976103-976210:1:exon

position:976103:1
position: 976103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:976210:1
position: 976210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:977313-977384:1:exon

position:977313:1
position: 977313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:977384:1
position: 977384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:977504-977732:1:exon

position:977504:1
position: 977504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:977732:1
position: 977732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:979067-979175:1:exon

position:979067:1
position: 979067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:979175:1
position: 979175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:979222-979332:1:exon

position:979222:1
position: 979222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SNAPC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SNAPC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: snRNA-activating protein complex subunit 2
translation: MKPPLRRRFVPSRFAAVPPSPERPQRGAWGQREKRALLAALRAQAERGLSEQRLPAALREQLPRRSEAEIRALLVRLRGRAAREALTSKFRNFLRLQRQIRAPIQVWQDLTETLGGGVLEGPPSAAFSQVLTVAATEPLSLELSRPPQELGTPSPNSGPPREGETPSPNSGSPPNPGGLQVDFGRIYEFLARISAGGEGQPLPPAESAVVLALLGALPAELGALGALGSLQHHLRGVWGSLRGPAPLLPPPLNPLLVPLGLLGRAG
SIO_010081: SNAPC2
subclass of: SO_0000673
so part of: SNAPC2
location: join(974772..974978,976103..976210,977313..977384,977504..977732,979067..979175,979222..979297)
location: region:974772-979297:1
so has part: feature:974772-974978:1:exon
so has part: feature:976103-976210:1:exon
so has part: feature:977313-977384:1:exon
so has part: feature:977504-977732:1:exon
so has part: feature:979067-979175:1:exon
so has part: feature:979222-979297:1:exon

XP_032940203.1
type: Protein
SIO_000068: ncbiprotein

position:974772:1
position: 974772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:979297:1
position: 979297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:974772-974978:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:976103-976210:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:977313-977384:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:977504-977732:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:979067-979175:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:979222-979297:1:exon

LOC117009941
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009941
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 981697..987830
location: region:981697-987830:1
so has part: feature:981697-987830:1:exon
subclass of: SO_0000010

117009941
type: Gene
SIO_000068: ncbigene

position:981697:1
position: 981697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:987830:1
position: 987830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:981697-987830:1:exon

LOC117009941
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009941
product: GABA type A receptor-associated protein
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084310.2
SIO_010081: LOC117009941
subclass of: SO_0000673
so part of: LOC117009941
location: join(981697..981993,982556..982634,986277..986395,987610..987830)
location: region:981697-987830:1
so has part: feature:981697-981993:1:exon
so has part: feature:982556-982634:1:exon
so has part: feature:986277-986395:1:exon
so has part: feature:987610-987830:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:981697-981993:1:exon

position:981993:1
position: 981993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:982556-982634:1:exon

position:982556:1
position: 982556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:982634:1
position: 982634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:986277-986395:1:exon

position:986277:1
position: 986277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:986395:1
position: 986395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:987610-987830:1:exon

position:987610:1
position: 987610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117009941
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009941
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-aminobutyric acid receptor-associated protein
translation: MGGAYAVCAACAVGAAGGGGPRSLRAPRGSGPGLVPVPVPVPVPAPSRPRPRAGPGPGPRPGPAMKFLYKEEHPFEKRRCEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYGA
SIO_010081: LOC117009941
subclass of: SO_0000673
so part of: LOC117009941
location: join(981712..981993,982556..982634,986277..986395,987610..987675)
location: region:981712-987675:1
so has part: feature:981712-981993:1:exon
so has part: feature:982556-982634:1:exon
so has part: feature:986277-986395:1:exon
so has part: feature:987610-987675:1:exon

XP_032940201.2
type: Protein
SIO_000068: ncbiprotein

position:981712:1
position: 981712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:987675:1
position: 987675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:981712-981993:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:982556-982634:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:986277-986395:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:987610-987675:1:exon

PHF23
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: PHF23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 988398..995924
location: region:988398-995924:1
so has part: feature:988398-995924:1:exon
subclass of: SO_0000010

117009907
type: Gene
SIO_000068: ncbigene

position:988398:1
position: 988398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:995924:1
position: 995924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:988398-995924:1:exon

PHF23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PHF23
product: PHD finger protein 23
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033084261.1
SIO_010081: PHF23
subclass of: SO_0000673
so part of: PHF23
location: join(988398..988462,989161..989192,989371..989463,991836..992306,992337..992439,995108..995924)
location: region:988398-995924:1
so has part: feature:988398-988462:1:exon
so has part: feature:989161-989192:1:exon
so has part: feature:989371-989463:1:exon
so has part: feature:991836-992306:1:exon
so has part: feature:992337-992439:1:exon
so has part: feature:995108-995924:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:988398-988462:1:exon

position:988462:1
position: 988462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:989161-989192:1:exon

position:989161:1
position: 989161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:989192:1
position: 989192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:989371-989463:1:exon

position:989371:1
position: 989371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:989463:1
position: 989463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:991836-992306:1:exon

position:991836:1
position: 991836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:992306:1
position: 992306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:992337-992439:1:exon

position:992337:1
position: 992337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:992439:1
position: 992439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:995108-995924:1:exon

position:995108:1
position: 995108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PHF23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PHF23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PHD finger protein 23
translation: MAEPGDALGPLKTEPQPPEKRRRTIEDFNKFCSFVLAYAGYIPAAAEDPSWPSSSPSSPRAPGGDAWGSAPAALRTIETFVRKAKSSKKRALAPPEANILDKMRLKDSLFDIPAPQNPAPPPQKRRERRNRRGDAGLGGGSRGGRDNSRIRVKKSKKRRWKKGERGVLGRGSPSEETDSEEEPPSPPPPPPPPPPLPPEGGKLGVGKEGGSTETSRDGDGSDSEGDARVMDEDIMVESGDDSWDLITCYCQKPFAGRPMIECSQCGTWIHLSCAKVKKNNVPDVFYCQKCREGPRRAGPAAPRANAEP
SIO_010081: PHF23
subclass of: SO_0000673
so part of: PHF23
location: join(988447..988462,989161..989192,989371..989463,991836..992306,992337..992439,995108..995319)
location: region:988447-995319:1
so has part: feature:988447-988462:1:exon
so has part: feature:989161-989192:1:exon
so has part: feature:989371-989463:1:exon
so has part: feature:991836-992306:1:exon
so has part: feature:992337-992439:1:exon
so has part: feature:995108-995319:1:exon

XP_032940152.1
type: Protein
SIO_000068: ncbiprotein

position:988447:1
position: 988447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:995319:1
position: 995319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:988447-988462:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:989161-989192:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:989371-989463:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:991836-992306:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:992337-992439:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:995108-995319:1:exon

ACADVL
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: ACADVL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1000144..1030344
location: region:1000144-1030344:1
so has part: feature:1000144-1030344:1:exon
subclass of: SO_0000010

117009908
type: Gene
SIO_000068: ncbigene

position:1000144:1
position: 1000144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1030344:1
position: 1030344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1000144-1030344:1:exon

ACADVL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ACADVL
product: acyl-CoA dehydrogenase very long chain
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084262.2
SIO_010081: ACADVL
subclass of: SO_0000673
so part of: ACADVL
location: join(1000144..1000330,1000774..1000813,1002306..1002374,1003726..1003798,1006845..1006909,1007601..1007735,1010427..1010571,1014335..1014464,1019541..1019666,1022834..1022994,1023325..1023362,1025985..1026123,1028717..1028815,1030340..1030344)
location: region:1000144-1030344:1
so has part: feature:1000144-1000330:1:exon
so has part: feature:1000774-1000813:1:exon
so has part: feature:1002306-1002374:1:exon
so has part: feature:1003726-1003798:1:exon
so has part: feature:1006845-1006909:1:exon
so has part: feature:1007601-1007735:1:exon
so has part: feature:1010427-1010571:1:exon
so has part: feature:1014335-1014464:1:exon
so has part: feature:1019541-1019666:1:exon
so has part: feature:1022834-1022994:1:exon
so has part: feature:1023325-1023362:1:exon
so has part: feature:1025985-1026123:1:exon
so has part: feature:1028717-1028815:1:exon
so has part: feature:1030340-1030344:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1000144-1000330:1:exon

position:1000330:1
position: 1000330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1000774-1000813:1:exon

position:1000774:1
position: 1000774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1000813:1
position: 1000813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1002306-1002374:1:exon

position:1002306:1
position: 1002306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1002374:1
position: 1002374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1003726-1003798:1:exon

position:1003726:1
position: 1003726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1003798:1
position: 1003798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1006845-1006909:1:exon

position:1006845:1
position: 1006845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1006909:1
position: 1006909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1007601-1007735:1:exon

position:1007601:1
position: 1007601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1007735:1
position: 1007735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1010427-1010571:1:exon

position:1010427:1
position: 1010427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010571:1
position: 1010571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1014335-1014464:1:exon

position:1014335:1
position: 1014335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1014464:1
position: 1014464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1019541-1019666:1:exon

position:1019541:1
position: 1019541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1019666:1
position: 1019666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1022834-1022994:1:exon

position:1022834:1
position: 1022834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1022994:1
position: 1022994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1023325-1023362:1:exon

position:1023325:1
position: 1023325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1023362:1
position: 1023362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1025985-1026123:1:exon

position:1025985:1
position: 1025985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1026123:1
position: 1026123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1028717-1028815:1:exon

position:1028717:1
position: 1028717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1028815:1
position: 1028815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1030340-1030344:1:exon

position:1030340:1
position: 1030340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ACADVL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ACADVL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: very long-chain specific acyl-CoA dehydrogenase, mitochondrial
translation: MAGLGMGAGLRLLRRIPPGFGGSRLQSRHKAQAVLPKTGTSTATAAPPKSQSSLEESKSFAVGMFLGRLNAEQVFPYPSVLTEEQEQTLQELVGPLSRFFEEVNDPAQNDALEKVEDETMKGLKELGAFGLQVPPEFGGLGLNNTQYARLVQIVGQHDLGVGITLGAHQSIGFKGLLLYGTPPQKEKYLPRLATGEWVAAFCLTEPGSGSDAASIRTRATPSPCGTFWTLDGEKIWISNGGLAELFTVFAKTPVKDERTGESKEKITAFIVERGFGGVTHGPPEKKLGIRASNTTSVHFDSVRVPAQNVLGAPGGGFKVAMNILNNGRFGMAAAMAGTMRGLMAQAVSHAASRTQFGAKIHQFGAIQEKLGRMALLHYVTEVGLGKFGIFGESSRQLLQDALDPPRLRAQQLLGVLQSPLFQALIG
SIO_010081: ACADVL
subclass of: SO_0000673
so part of: ACADVL
location: join(1000275..1000330,1000774..1000813,1002306..1002374,1003726..1003798,1006845..1006909,1007601..1007735,1010427..1010571,1014335..1014464,1019541..1019666,1022834..1022994,1023325..1023362,1025985..1026123,1028717..1028815,1030340..1030344)
location: region:1000275-1030344:1
so has part: feature:1000275-1000330:1:exon
so has part: feature:1000774-1000813:1:exon
so has part: feature:1002306-1002374:1:exon
so has part: feature:1003726-1003798:1:exon
so has part: feature:1006845-1006909:1:exon
so has part: feature:1007601-1007735:1:exon
so has part: feature:1010427-1010571:1:exon
so has part: feature:1014335-1014464:1:exon
so has part: feature:1019541-1019666:1:exon
so has part: feature:1022834-1022994:1:exon
so has part: feature:1023325-1023362:1:exon
so has part: feature:1025985-1026123:1:exon
so has part: feature:1028717-1028815:1:exon
so has part: feature:1030340-1030344:1:exon

XP_032940153.1
type: Protein
SIO_000068: ncbiprotein

position:1000275:1
position: 1000275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1000275-1000330:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1000774-1000813:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1002306-1002374:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1003726-1003798:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1006845-1006909:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1007601-1007735:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1010427-1010571:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1014335-1014464:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1019541-1019666:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1022834-1022994:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1023325-1023362:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1025985-1026123:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1028717-1028815:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1030340-1030344:1:exon

DLG4
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: DLG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1034376..1093267
location: region:1034376-1093267:1
so has part: feature:1034376-1093267:1:exon
subclass of: SO_0000010

117009940
type: Gene
SIO_000068: ncbigene

position:1034376:1
position: 1034376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1093267:1
position: 1093267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1034376-1093267:1:exon

DLG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: DLG4
product: discs large MAGUK scaffold protein 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033084304.2
SIO_010081: DLG4
subclass of: SO_0000673
so part of: DLG4
location: join(1034376..1034500,1045475..1045540,1046656..1046709,1048363..1048413,1051164..1051288,1059657..1059826,1064524..1064660,1067379..1067523,1069646..1069784,1072468..1072624,1074699..1074801,1078172..1078194,1078930..1079021,1080962..1081138,1083009..1083067,1083826..1083873,1085142..1085243,1086123..1086295,1089313..1089422,1090993..1091084,1092782..1093267)
location: region:1034376-1093267:1
so has part: feature:1034376-1034500:1:exon
so has part: feature:1045475-1045540:1:exon
so has part: feature:1046656-1046709:1:exon
so has part: feature:1048363-1048413:1:exon
so has part: feature:1051164-1051288:1:exon
so has part: feature:1059657-1059826:1:exon
so has part: feature:1064524-1064660:1:exon
so has part: feature:1067379-1067523:1:exon
so has part: feature:1069646-1069784:1:exon
so has part: feature:1072468-1072624:1:exon
so has part: feature:1074699-1074801:1:exon
so has part: feature:1078172-1078194:1:exon
so has part: feature:1078930-1079021:1:exon
so has part: feature:1080962-1081138:1:exon
so has part: feature:1083009-1083067:1:exon
so has part: feature:1083826-1083873:1:exon
so has part: feature:1085142-1085243:1:exon
so has part: feature:1086123-1086295:1:exon
so has part: feature:1089313-1089422:1:exon
so has part: feature:1090993-1091084:1:exon
so has part: feature:1092782-1093267:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1034376-1034500:1:exon

position:1034500:1
position: 1034500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1045475-1045540:1:exon

position:1045475:1
position: 1045475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1045540:1
position: 1045540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1046656-1046709:1:exon

position:1046656:1
position: 1046656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046709:1
position: 1046709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1048363-1048413:1:exon

position:1048363:1
position: 1048363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1048413:1
position: 1048413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1051164-1051288:1:exon

position:1051164:1
position: 1051164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1051288:1
position: 1051288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1059657-1059826:1:exon

position:1059657:1
position: 1059657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1059826:1
position: 1059826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1064524-1064660:1:exon

position:1064524:1
position: 1064524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1064660:1
position: 1064660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1067379-1067523:1:exon

position:1067379:1
position: 1067379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1067523:1
position: 1067523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1069646-1069784:1:exon

position:1069646:1
position: 1069646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1069784:1
position: 1069784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1072468-1072624:1:exon

position:1072468:1
position: 1072468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1072624:1
position: 1072624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1074699-1074801:1:exon

position:1074699:1
position: 1074699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1074801:1
position: 1074801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1078172-1078194:1:exon

position:1078172:1
position: 1078172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1078194:1
position: 1078194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1078930-1079021:1:exon

position:1078930:1
position: 1078930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1079021:1
position: 1079021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1080962-1081138:1:exon

position:1080962:1
position: 1080962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1081138:1
position: 1081138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1083009-1083067:1:exon

position:1083009:1
position: 1083009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1083067:1
position: 1083067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1083826-1083873:1:exon

position:1083826:1
position: 1083826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1083873:1
position: 1083873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1085142-1085243:1:exon

position:1085142:1
position: 1085142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1085243:1
position: 1085243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1086123-1086295:1:exon

position:1086123:1
position: 1086123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1086295:1
position: 1086295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1089313-1089422:1:exon

position:1089313:1
position: 1089313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1089422:1
position: 1089422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1090993-1091084:1:exon

position:1090993:1
position: 1090993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1091084:1
position: 1091084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1092782-1093267:1:exon

position:1092782:1
position: 1092782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DLG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: DLG4
product: discs large MAGUK scaffold protein 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 72 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033084300.2
SIO_010081: DLG4
subclass of: SO_0000673
so part of: DLG4
location: join(1034376..1034500,1045475..1045540,1046656..1046709,1048363..1048413,1051164..1051288,1059657..1059826,1064524..1064660,1067379..1067523,1069646..1069784,1072468..1072624,1074699..1074801,1078907..1079021,1080962..1081138,1083009..1083067,1083826..1083873,1085142..1085243,1086123..1086295,1089313..1089422,1090993..1091084,1092782..1093267)
location: region:1034376-1093267:1
so has part: feature:1034376-1034500:1:exon
so has part: feature:1045475-1045540:1:exon
so has part: feature:1046656-1046709:1:exon
so has part: feature:1048363-1048413:1:exon
so has part: feature:1051164-1051288:1:exon
so has part: feature:1059657-1059826:1:exon
so has part: feature:1064524-1064660:1:exon
so has part: feature:1067379-1067523:1:exon
so has part: feature:1069646-1069784:1:exon
so has part: feature:1072468-1072624:1:exon
so has part: feature:1074699-1074801:1:exon
so has part: feature:1078907-1079021:1:exon
so has part: feature:1080962-1081138:1:exon
so has part: feature:1083009-1083067:1:exon
so has part: feature:1083826-1083873:1:exon
so has part: feature:1085142-1085243:1:exon
so has part: feature:1086123-1086295:1:exon
so has part: feature:1089313-1089422:1:exon
so has part: feature:1090993-1091084:1:exon
so has part: feature:1092782-1093267:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1034376-1034500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1045475-1045540:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1046656-1046709:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1048363-1048413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1051164-1051288:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1059657-1059826:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1064524-1064660:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1067379-1067523:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1069646-1069784:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1072468-1072624:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1074699-1074801:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1078907-1079021:1:exon

position:1078907:1
position: 1078907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1080962-1081138:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1083009-1083067:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1083826-1083873:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1085142-1085243:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1086123-1086295:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1089313-1089422:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1090993-1091084:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1092782-1093267:1:exon

DLG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: DLG4
product: discs large MAGUK scaffold protein 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033084302.2
SIO_010081: DLG4
subclass of: SO_0000673
so part of: DLG4
location: join(1034376..1034500,1045475..1045540,1046656..1046709,1048363..1048413,1051164..1051288,1059657..1059826,1064524..1064660,1067379..1067436,1067594..1067680,1069646..1069784,1072468..1072624,1074699..1074801,1078907..1079021,1080962..1081138,1083009..1083067,1083826..1083873,1085142..1085243,1086123..1086295,1089313..1089422,1090993..1091084,1092782..1093267)
location: region:1034376-1093267:1
so has part: feature:1034376-1034500:1:exon
so has part: feature:1045475-1045540:1:exon
so has part: feature:1046656-1046709:1:exon
so has part: feature:1048363-1048413:1:exon
so has part: feature:1051164-1051288:1:exon
so has part: feature:1059657-1059826:1:exon
so has part: feature:1064524-1064660:1:exon
so has part: feature:1067379-1067436:1:exon
so has part: feature:1067594-1067680:1:exon
so has part: feature:1069646-1069784:1:exon
so has part: feature:1072468-1072624:1:exon
so has part: feature:1074699-1074801:1:exon
so has part: feature:1078907-1079021:1:exon
so has part: feature:1080962-1081138:1:exon
so has part: feature:1083009-1083067:1:exon
so has part: feature:1083826-1083873:1:exon
so has part: feature:1085142-1085243:1:exon
so has part: feature:1086123-1086295:1:exon
so has part: feature:1089313-1089422:1:exon
so has part: feature:1090993-1091084:1:exon
so has part: feature:1092782-1093267:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1034376-1034500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1045475-1045540:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1046656-1046709:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1048363-1048413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1051164-1051288:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1059657-1059826:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1064524-1064660:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1067379-1067436:1:exon

position:1067436:1
position: 1067436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1067594-1067680:1:exon

position:1067594:1
position: 1067594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1067680:1
position: 1067680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1069646-1069784:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1072468-1072624:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1074699-1074801:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1078907-1079021:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1080962-1081138:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1083009-1083067:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1083826-1083873:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1085142-1085243:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1086123-1086295:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1089313-1089422:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1090993-1091084:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1092782-1093267:1:exon

DLG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: DLG4
product: discs large MAGUK scaffold protein 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033084303.2
SIO_010081: DLG4
subclass of: SO_0000673
so part of: DLG4
location: join(1034376..1034500,1045475..1045540,1046656..1046709,1048363..1048413,1051164..1051288,1059657..1059826,1064524..1064660,1067379..1067436,1067750..1067836,1069646..1069784,1072468..1072624,1074699..1074801,1078907..1079021,1080962..1081138,1083009..1083067,1083826..1083873,1085142..1085243,1086123..1086295,1089313..1089422,1090993..1091084,1092782..1093267)
location: region:1034376-1093267:1
so has part: feature:1034376-1034500:1:exon
so has part: feature:1045475-1045540:1:exon
so has part: feature:1046656-1046709:1:exon
so has part: feature:1048363-1048413:1:exon
so has part: feature:1051164-1051288:1:exon
so has part: feature:1059657-1059826:1:exon
so has part: feature:1064524-1064660:1:exon
so has part: feature:1067379-1067436:1:exon
so has part: feature:1067750-1067836:1:exon
so has part: feature:1069646-1069784:1:exon
so has part: feature:1072468-1072624:1:exon
so has part: feature:1074699-1074801:1:exon
so has part: feature:1078907-1079021:1:exon
so has part: feature:1080962-1081138:1:exon
so has part: feature:1083009-1083067:1:exon
so has part: feature:1083826-1083873:1:exon
so has part: feature:1085142-1085243:1:exon
so has part: feature:1086123-1086295:1:exon
so has part: feature:1089313-1089422:1:exon
so has part: feature:1090993-1091084:1:exon
so has part: feature:1092782-1093267:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1034376-1034500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1045475-1045540:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1046656-1046709:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1048363-1048413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1051164-1051288:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1059657-1059826:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1064524-1064660:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1067379-1067436:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1067750-1067836:1:exon

position:1067750:1
position: 1067750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1067836:1
position: 1067836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1069646-1069784:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1072468-1072624:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1074699-1074801:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1078907-1079021:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1080962-1081138:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1083009-1083067:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1083826-1083873:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1085142-1085243:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1086123-1086295:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1089313-1089422:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1090993-1091084:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1092782-1093267:1:exon

DLG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: DLG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large homolog 4 isoform X4
translation: MDCLCIVTTKKYRYQDEDSPPLEQSPAHLPSQANSPPVIVNTDTLEAPAYVNGTEGEMEYEEITLERGNSGLGFSIAGGTDNPHVGDDPGIFITKIIPGGAAAQDGRLRVNDSILFVNEADVREVPHSAAVEALKEAGAVVRLYVMRRKVPAERVVEVKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKVIEGGAAHKDGRLQVGDKILAVNNVSLEDVMHEDAVAALKNTYDVVYLRVAKATVPGLGDSYGPPDVTGSYSAHLDSELPPQSFLGPEFPPALTPTSPRRFSPGPKELLPDDDVPREPRRIVIPRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRGATHEQAALALKNAGQSVTIVAQYRPEEYGRFEAKIHDLREQLLSSSLGSGSASLRSDPKRGFYVRALFDYDKAKDVGFLSQALSFRFGDILHVLDASDEEWWQARLVLPPQQPPDIGFVPSKRRVERREWTRLKAKDRGPGAQGREDAVLSYETVTQMEVHYARPIIILGPTKDRVNDDLLSEFPEKFGSCVPHTTRPKREYEVDGRDYHFVASRERMEKDIQGHKFIEAGQYNSHLYGTSVQSVREVAEQGKHCILDVSANAVRRLQAAQLHPIAIFIRPKSLQNVLEISKRVSEEQARKAFDRATKLEQEFTECFSAMVEGDSFEEIYHKVKRVIEDLSGPFIWVPARERL
SIO_010081: DLG4
subclass of: SO_0000673
so part of: DLG4
location: join(1034471..1034500,1045475..1045540,1046656..1046709,1048363..1048413,1051164..1051288,1059657..1059826,1064524..1064660,1067379..1067523,1069646..1069784,1072468..1072624,1074699..1074801,1078172..1078194,1078930..1079021,1080962..1081138,1083009..1083067,1083826..1083873,1085142..1085243,1086123..1086295,1089313..1089422,1090993..1091084,1092782..1092888)
location: region:1034471-1092888:1
so has part: feature:1034471-1034500:1:exon
so has part: feature:1045475-1045540:1:exon
so has part: feature:1046656-1046709:1:exon
so has part: feature:1048363-1048413:1:exon
so has part: feature:1051164-1051288:1:exon
so has part: feature:1059657-1059826:1:exon
so has part: feature:1064524-1064660:1:exon
so has part: feature:1067379-1067523:1:exon
so has part: feature:1069646-1069784:1:exon
so has part: feature:1072468-1072624:1:exon
so has part: feature:1074699-1074801:1:exon
so has part: feature:1078172-1078194:1:exon
so has part: feature:1078930-1079021:1:exon
so has part: feature:1080962-1081138:1:exon
so has part: feature:1083009-1083067:1:exon
so has part: feature:1083826-1083873:1:exon
so has part: feature:1085142-1085243:1:exon
so has part: feature:1086123-1086295:1:exon
so has part: feature:1089313-1089422:1:exon
so has part: feature:1090993-1091084:1:exon
so has part: feature:1092782-1092888:1:exon

XP_032940195.1
type: Protein
SIO_000068: ncbiprotein

position:1034471:1
position: 1034471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1092888:1
position: 1092888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1034471-1034500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1045475-1045540:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1046656-1046709:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1048363-1048413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1051164-1051288:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1059657-1059826:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1064524-1064660:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1067379-1067523:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1069646-1069784:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1072468-1072624:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1074699-1074801:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1078172-1078194:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1078930-1079021:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1080962-1081138:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1083009-1083067:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1083826-1083873:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1085142-1085243:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1086123-1086295:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1089313-1089422:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1090993-1091084:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1092782-1092888:1:exon

DLG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: DLG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large homolog 4 isoform X1
translation: MDCLCIVTTKKYRYQDEDSPPLEQSPAHLPSQANSPPVIVNTDTLEAPAYVNGTEGEMEYEEITLERGNSGLGFSIAGGTDNPHVGDDPGIFITKIIPGGAAAQDGRLRVNDSILFVNEADVREVPHSAAVEALKEAGAVVRLYVMRRKVPAERVVEVKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKVIEGGAAHKDGRLQVGDKILAVNNVSLEDVMHEDAVAALKNTYDVVYLRVAKATVPGLGDSYGPPDVTGSYSAHLDSELPPQSFLGPEFPPALTPTSPRRFSPGPKELLPDDDVPREPRRIVIPRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRGATHEQAALALKNAGQSVTIVAQYRPEEYGRFEAKIHDLREQLLSSSLGSGSASLRSDPKRGFYVRALFDYDKAKDVGFLSQALSFRFGDILHVLDASDEEWWQARLVLPPQQPPDIGFVPSKRRVERREWTRLKAKDRGPGAQGREDAVLSYETVTQMEVHYARPIIILGPTKDRVNDDLLSEFPEKFGSCVPHTTRPKREYEVDGRDYHFVASRERMEKDIQGHKFIEAGQYNSHLYGTSVQSVREVAEQGKHCILDVSANAVRRLQAAQLHPIAIFIRPKSLQNVLEISKRVSEEQARKAFDRATKLEQEFTECFSAMVEGDSFEEIYHKVKRVIEDLSGPFIWVPARERL
SIO_010081: DLG4
subclass of: SO_0000673
so part of: DLG4
location: join(1034471..1034500,1045475..1045540,1046656..1046709,1048363..1048413,1051164..1051288,1059657..1059826,1064524..1064660,1067379..1067523,1069646..1069784,1072468..1072624,1074699..1074801,1078907..1079021,1080962..1081138,1083009..1083067,1083826..1083873,1085142..1085243,1086123..1086295,1089313..1089422,1090993..1091084,1092782..1092888)
location: region:1034471-1092888:1
so has part: feature:1034471-1034500:1:exon
so has part: feature:1045475-1045540:1:exon
so has part: feature:1046656-1046709:1:exon
so has part: feature:1048363-1048413:1:exon
so has part: feature:1051164-1051288:1:exon
so has part: feature:1059657-1059826:1:exon
so has part: feature:1064524-1064660:1:exon
so has part: feature:1067379-1067523:1:exon
so has part: feature:1069646-1069784:1:exon
so has part: feature:1072468-1072624:1:exon
so has part: feature:1074699-1074801:1:exon
so has part: feature:1078907-1079021:1:exon
so has part: feature:1080962-1081138:1:exon
so has part: feature:1083009-1083067:1:exon
so has part: feature:1083826-1083873:1:exon
so has part: feature:1085142-1085243:1:exon
so has part: feature:1086123-1086295:1:exon
so has part: feature:1089313-1089422:1:exon
so has part: feature:1090993-1091084:1:exon
so has part: feature:1092782-1092888:1:exon

XP_032940191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1034471-1034500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1045475-1045540:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1046656-1046709:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1048363-1048413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1051164-1051288:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1059657-1059826:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1064524-1064660:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1067379-1067523:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1069646-1069784:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1072468-1072624:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1074699-1074801:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1078907-1079021:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1080962-1081138:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1083009-1083067:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1083826-1083873:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1085142-1085243:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1086123-1086295:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1089313-1089422:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1090993-1091084:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1092782-1092888:1:exon

DLG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: DLG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large homolog 4 isoform X2
translation: MDCLCIVTTKKYRYQDEDSPPLEQSPAHLPSQANSPPVIVNTDTLEAPAYVNGTEGEMEYEEITLERGNSGLGFSIAGGTDNPHVGDDPGIFITKIIPGGAAAQDGRLRVNDSILFVNEADVREVPHSAAVEALKEAGAVVRLYVMRRKVPAERVVEVKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKVIEGGAAHKDGRLQVGDKILAVNNVSLEDVMHEDAVAALKNTYDVVYLRVAKATVPGLGDSYGPPDVTGSYSAHLDSELPPQSFLGPEFPPALTPTSPRRFSPGPKELLPDDDVPREPRRIVIPRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRGATHEQAALALKNAGQSVTIVAQYRPEEYGRFEAKIHDLREQLLSSSLGSGSASLRSDPKRGFYVRALFDYDKAKDVGFLSQALSFRFGDILHVLDASDEEWWQARLVLPPQQPPDIGFVPSKRRVERREWTRLKAKDRGPGAQGREDAVLSYETVTQMEVHYARPIIILGPTKDRVNDDLLSEFPEKFGSCVPHTTRPKREYEVDGRDYHFVASRERMEKDIQGHKFIEAGQYNSHLYGTSVQSVREVAEQGKHCILDVSANAVRRLQAAQLHPIAIFIRPKSLQNVLEISKRVSEEQARKAFDRATKLEQEFTECFSAMVEGDSFEEIYHKVKRVIEDLSGPFIWVPARERL
SIO_010081: DLG4
subclass of: SO_0000673
so part of: DLG4
location: join(1034471..1034500,1045475..1045540,1046656..1046709,1048363..1048413,1051164..1051288,1059657..1059826,1064524..1064660,1067379..1067436,1067594..1067680,1069646..1069784,1072468..1072624,1074699..1074801,1078907..1079021,1080962..1081138,1083009..1083067,1083826..1083873,1085142..1085243,1086123..1086295,1089313..1089422,1090993..1091084,1092782..1092888)
location: region:1034471-1092888:1
so has part: feature:1034471-1034500:1:exon
so has part: feature:1045475-1045540:1:exon
so has part: feature:1046656-1046709:1:exon
so has part: feature:1048363-1048413:1:exon
so has part: feature:1051164-1051288:1:exon
so has part: feature:1059657-1059826:1:exon
so has part: feature:1064524-1064660:1:exon
so has part: feature:1067379-1067436:1:exon
so has part: feature:1067594-1067680:1:exon
so has part: feature:1069646-1069784:1:exon
so has part: feature:1072468-1072624:1:exon
so has part: feature:1074699-1074801:1:exon
so has part: feature:1078907-1079021:1:exon
so has part: feature:1080962-1081138:1:exon
so has part: feature:1083009-1083067:1:exon
so has part: feature:1083826-1083873:1:exon
so has part: feature:1085142-1085243:1:exon
so has part: feature:1086123-1086295:1:exon
so has part: feature:1089313-1089422:1:exon
so has part: feature:1090993-1091084:1:exon
so has part: feature:1092782-1092888:1:exon

XP_032940193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1034471-1034500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1045475-1045540:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1046656-1046709:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1048363-1048413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1051164-1051288:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1059657-1059826:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1064524-1064660:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1067379-1067436:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1067594-1067680:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1069646-1069784:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1072468-1072624:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1074699-1074801:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1078907-1079021:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1080962-1081138:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1083009-1083067:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1083826-1083873:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1085142-1085243:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1086123-1086295:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1089313-1089422:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1090993-1091084:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1092782-1092888:1:exon

DLG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: DLG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large homolog 4 isoform X3
translation: MDCLCIVTTKKYRYQDEDSPPLEQSPAHLPSQANSPPVIVNTDTLEAPAYVNGTEGEMEYEEITLERGNSGLGFSIAGGTDNPHVGDDPGIFITKIIPGGAAAQDGRLRVNDSILFVNEADVREVPHSAAVEALKEAGAVVRLYVMRRKVPAERVVEVKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKVIEGGAAHKDGRLQVGDKILAVNNVSLEDVMHEDAVAALKNTYDVVYLRVAKATVPGLGDSYGPPDVTGSYSAHLDSELPPQSFLGPEFPPALTPTSPRRFSPGPKELLPDDDVPREPRRIVIPRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRGATHEQAALALKNAGQSVTIVAQYRPEEYGRFEAKIHDLREQLLSSSLGSGSASLRSDPKRGFYVRALFDYDKAKDVGFLSQALSFRFGDILHVLDASDEEWWQARLVLPPQQPPDIGFVPSKRRVERREWTRLKAKDRGPGAQGREDAVLSYETVTQMEVHYARPIIILGPTKDRVNDDLLSEFPEKFGSCVPHTTRPKREYEVDGRDYHFVASRERMEKDIQGHKFIEAGQYNSHLYGTSVQSVREVAEQGKHCILDVSANAVRRLQAAQLHPIAIFIRPKSLQNVLEISKRVSEEQARKAFDRATKLEQEFTECFSAMVEGDSFEEIYHKVKRVIEDLSGPFIWVPARERL
SIO_010081: DLG4
subclass of: SO_0000673
so part of: DLG4
location: join(1034471..1034500,1045475..1045540,1046656..1046709,1048363..1048413,1051164..1051288,1059657..1059826,1064524..1064660,1067379..1067436,1067750..1067836,1069646..1069784,1072468..1072624,1074699..1074801,1078907..1079021,1080962..1081138,1083009..1083067,1083826..1083873,1085142..1085243,1086123..1086295,1089313..1089422,1090993..1091084,1092782..1092888)
location: region:1034471-1092888:1
so has part: feature:1034471-1034500:1:exon
so has part: feature:1045475-1045540:1:exon
so has part: feature:1046656-1046709:1:exon
so has part: feature:1048363-1048413:1:exon
so has part: feature:1051164-1051288:1:exon
so has part: feature:1059657-1059826:1:exon
so has part: feature:1064524-1064660:1:exon
so has part: feature:1067379-1067436:1:exon
so has part: feature:1067750-1067836:1:exon
so has part: feature:1069646-1069784:1:exon
so has part: feature:1072468-1072624:1:exon
so has part: feature:1074699-1074801:1:exon
so has part: feature:1078907-1079021:1:exon
so has part: feature:1080962-1081138:1:exon
so has part: feature:1083009-1083067:1:exon
so has part: feature:1083826-1083873:1:exon
so has part: feature:1085142-1085243:1:exon
so has part: feature:1086123-1086295:1:exon
so has part: feature:1089313-1089422:1:exon
so has part: feature:1090993-1091084:1:exon
so has part: feature:1092782-1092888:1:exon

XP_032940194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1034471-1034500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1045475-1045540:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1046656-1046709:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1048363-1048413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1051164-1051288:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1059657-1059826:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1064524-1064660:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1067379-1067436:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1067750-1067836:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1069646-1069784:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1072468-1072624:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1074699-1074801:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1078907-1079021:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1080962-1081138:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1083009-1083067:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1083826-1083873:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1085142-1085243:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1086123-1086295:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1089313-1089422:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1090993-1091084:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1092782-1092888:1:exon

DLG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: DLG4
product: discs large MAGUK scaffold protein 4, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033084307.2
SIO_010081: DLG4
subclass of: SO_0000673
so part of: DLG4
location: join(1052371..1052396,1059657..1059826,1064524..1064660,1067379..1067523,1069646..1069784,1072468..1072624,1074699..1074801,1078907..1079021,1080962..1081138,1083009..1083067,1083826..1083873,1085142..1085243,1086123..1086295,1089313..1089422,1090993..1091084,1092782..1093267)
location: region:1052371-1093267:1
so has part: feature:1052371-1052396:1:exon
so has part: feature:1059657-1059826:1:exon
so has part: feature:1064524-1064660:1:exon
so has part: feature:1067379-1067523:1:exon
so has part: feature:1069646-1069784:1:exon
so has part: feature:1072468-1072624:1:exon
so has part: feature:1074699-1074801:1:exon
so has part: feature:1078907-1079021:1:exon
so has part: feature:1080962-1081138:1:exon
so has part: feature:1083009-1083067:1:exon
so has part: feature:1083826-1083873:1:exon
so has part: feature:1085142-1085243:1:exon
so has part: feature:1086123-1086295:1:exon
so has part: feature:1089313-1089422:1:exon
so has part: feature:1090993-1091084:1:exon
so has part: feature:1092782-1093267:1:exon

position:1052371:1
position: 1052371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1052371-1052396:1:exon

position:1052396:1
position: 1052396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1059657-1059826:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1064524-1064660:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1067379-1067523:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1069646-1069784:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1072468-1072624:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1074699-1074801:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1078907-1079021:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1080962-1081138:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1083009-1083067:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1083826-1083873:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1085142-1085243:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1086123-1086295:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1089313-1089422:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1090993-1091084:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1092782-1093267:1:exon

DLG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: DLG4
product: discs large MAGUK scaffold protein 4, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_033084306.2
SIO_010081: DLG4
subclass of: SO_0000673
so part of: DLG4
location: join(1055328..1055369,1059657..1059826,1064524..1064660,1067379..1067523,1069646..1069784,1072468..1072624,1074699..1074801,1078907..1079021,1080962..1081138,1083009..1083067,1083826..1083873,1085142..1085243,1086123..1086295,1089313..1089422,1090993..1091084,1092782..1093267)
location: region:1055328-1093267:1
so has part: feature:1055328-1055369:1:exon
so has part: feature:1059657-1059826:1:exon
so has part: feature:1064524-1064660:1:exon
so has part: feature:1067379-1067523:1:exon
so has part: feature:1069646-1069784:1:exon
so has part: feature:1072468-1072624:1:exon
so has part: feature:1074699-1074801:1:exon
so has part: feature:1078907-1079021:1:exon
so has part: feature:1080962-1081138:1:exon
so has part: feature:1083009-1083067:1:exon
so has part: feature:1083826-1083873:1:exon
so has part: feature:1085142-1085243:1:exon
so has part: feature:1086123-1086295:1:exon
so has part: feature:1089313-1089422:1:exon
so has part: feature:1090993-1091084:1:exon
so has part: feature:1092782-1093267:1:exon

position:1055328:1
position: 1055328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1055328-1055369:1:exon

position:1055369:1
position: 1055369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1059657-1059826:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1064524-1064660:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1067379-1067523:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1069646-1069784:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1072468-1072624:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1074699-1074801:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1078907-1079021:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1080962-1081138:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1083009-1083067:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1083826-1083873:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1085142-1085243:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1086123-1086295:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1089313-1089422:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1090993-1091084:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1092782-1093267:1:exon

DLG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: DLG4
product: discs large MAGUK scaffold protein 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_033084305.2
SIO_010081: DLG4
subclass of: SO_0000673
so part of: DLG4
location: join(1055848..1055875,1059657..1059826,1064524..1064660,1067379..1067523,1069646..1069784,1072468..1072624,1074699..1074801,1078907..1079021,1080962..1081138,1083009..1083067,1083826..1083873,1085142..1085243,1086123..1086295,1089313..1089422,1090993..1091084,1092782..1093267)
location: region:1055848-1093267:1
so has part: feature:1055848-1055875:1:exon
so has part: feature:1059657-1059826:1:exon
so has part: feature:1064524-1064660:1:exon
so has part: feature:1067379-1067523:1:exon
so has part: feature:1069646-1069784:1:exon
so has part: feature:1072468-1072624:1:exon
so has part: feature:1074699-1074801:1:exon
so has part: feature:1078907-1079021:1:exon
so has part: feature:1080962-1081138:1:exon
so has part: feature:1083009-1083067:1:exon
so has part: feature:1083826-1083873:1:exon
so has part: feature:1085142-1085243:1:exon
so has part: feature:1086123-1086295:1:exon
so has part: feature:1089313-1089422:1:exon
so has part: feature:1090993-1091084:1:exon
so has part: feature:1092782-1093267:1:exon

position:1055848:1
position: 1055848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1055848-1055875:1:exon

position:1055875:1
position: 1055875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1059657-1059826:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1064524-1064660:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1067379-1067523:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1069646-1069784:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1072468-1072624:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1074699-1074801:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1078907-1079021:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1080962-1081138:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1083009-1083067:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1083826-1083873:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1085142-1085243:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1086123-1086295:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1089313-1089422:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1090993-1091084:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1092782-1093267:1:exon

DLG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: DLG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large homolog 4 isoform X5
translation: MRRKVPAERVVEVKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKVIEGGAAHKDGRLQVGDKILAVNNVSLEDVMHEDAVAALKNTYDVVYLRVAKATVPGLGDSYGPPDVTGSYSAHLDSELPPQSFLGPEFPPALTPTSPRRFSPGPKELLPDDDVPREPRRIVIPRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRGATHEQAALALKNAGQSVTIVAQYRPEEYGRFEAKIHDLREQLLSSSLGSGSASLRSDPKRGFYVRALFDYDKAKDVGFLSQALSFRFGDILHVLDASDEEWWQARLVLPPQQPPDIGFVPSKRRVERREWTRLKAKDRGPGAQGREDAVLSYETVTQMEVHYARPIIILGPTKDRVNDDLLSEFPEKFGSCVPHTTRPKREYEVDGRDYHFVASRERMEKDIQGHKFIEAGQYNSHLYGTSVQSVREVAEQGKHCILDVSANAVRRLQAAQLHPIAIFIRPKSLQNVLEISKRVSEEQARKAFDRATKLEQEFTECFSAMVEGDSFEEIYHKVKRVIEDLSGPFIWVPARERL
SIO_010081: DLG4
subclass of: SO_0000673
so part of: DLG4
location: join(1059766..1059826,1064524..1064660,1067379..1067523,1069646..1069784,1072468..1072624,1074699..1074801,1078907..1079021,1080962..1081138,1083009..1083067,1083826..1083873,1085142..1085243,1086123..1086295,1089313..1089422,1090993..1091084,1092782..1092888)
location: region:1059766-1092888:1
so has part: feature:1059766-1059826:1:exon
so has part: feature:1064524-1064660:1:exon
so has part: feature:1067379-1067523:1:exon
so has part: feature:1069646-1069784:1:exon
so has part: feature:1072468-1072624:1:exon
so has part: feature:1074699-1074801:1:exon
so has part: feature:1078907-1079021:1:exon
so has part: feature:1080962-1081138:1:exon
so has part: feature:1083009-1083067:1:exon
so has part: feature:1083826-1083873:1:exon
so has part: feature:1085142-1085243:1:exon
so has part: feature:1086123-1086295:1:exon
so has part: feature:1089313-1089422:1:exon
so has part: feature:1090993-1091084:1:exon
so has part: feature:1092782-1092888:1:exon

XP_032940196.1
type: Protein
SIO_000068: ncbiprotein

position:1059766:1
position: 1059766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1059766-1059826:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1064524-1064660:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1067379-1067523:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1069646-1069784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1072468-1072624:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1074699-1074801:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1078907-1079021:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1080962-1081138:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1083009-1083067:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1083826-1083873:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1085142-1085243:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1086123-1086295:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1089313-1089422:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1090993-1091084:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1092782-1092888:1:exon

DLG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: DLG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large homolog 4 isoform X5
translation: MRRKVPAERVVEVKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKVIEGGAAHKDGRLQVGDKILAVNNVSLEDVMHEDAVAALKNTYDVVYLRVAKATVPGLGDSYGPPDVTGSYSAHLDSELPPQSFLGPEFPPALTPTSPRRFSPGPKELLPDDDVPREPRRIVIPRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRGATHEQAALALKNAGQSVTIVAQYRPEEYGRFEAKIHDLREQLLSSSLGSGSASLRSDPKRGFYVRALFDYDKAKDVGFLSQALSFRFGDILHVLDASDEEWWQARLVLPPQQPPDIGFVPSKRRVERREWTRLKAKDRGPGAQGREDAVLSYETVTQMEVHYARPIIILGPTKDRVNDDLLSEFPEKFGSCVPHTTRPKREYEVDGRDYHFVASRERMEKDIQGHKFIEAGQYNSHLYGTSVQSVREVAEQGKHCILDVSANAVRRLQAAQLHPIAIFIRPKSLQNVLEISKRVSEEQARKAFDRATKLEQEFTECFSAMVEGDSFEEIYHKVKRVIEDLSGPFIWVPARERL
SIO_010081: DLG4
subclass of: SO_0000673
so part of: DLG4
location: join(1059766..1059826,1064524..1064660,1067379..1067523,1069646..1069784,1072468..1072624,1074699..1074801,1078907..1079021,1080962..1081138,1083009..1083067,1083826..1083873,1085142..1085243,1086123..1086295,1089313..1089422,1090993..1091084,1092782..1092888)
location: region:1059766-1092888:1
so has part: feature:1059766-1059826:1:exon
so has part: feature:1064524-1064660:1:exon
so has part: feature:1067379-1067523:1:exon
so has part: feature:1069646-1069784:1:exon
so has part: feature:1072468-1072624:1:exon
so has part: feature:1074699-1074801:1:exon
so has part: feature:1078907-1079021:1:exon
so has part: feature:1080962-1081138:1:exon
so has part: feature:1083009-1083067:1:exon
so has part: feature:1083826-1083873:1:exon
so has part: feature:1085142-1085243:1:exon
so has part: feature:1086123-1086295:1:exon
so has part: feature:1089313-1089422:1:exon
so has part: feature:1090993-1091084:1:exon
so has part: feature:1092782-1092888:1:exon

XP_032940197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1059766-1059826:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1064524-1064660:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1067379-1067523:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1069646-1069784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1072468-1072624:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1074699-1074801:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1078907-1079021:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1080962-1081138:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1083009-1083067:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1083826-1083873:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1085142-1085243:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1086123-1086295:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1089313-1089422:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1090993-1091084:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1092782-1092888:1:exon

DLG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: DLG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large homolog 4 isoform X5
translation: MRRKVPAERVVEVKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKVIEGGAAHKDGRLQVGDKILAVNNVSLEDVMHEDAVAALKNTYDVVYLRVAKATVPGLGDSYGPPDVTGSYSAHLDSELPPQSFLGPEFPPALTPTSPRRFSPGPKELLPDDDVPREPRRIVIPRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRGATHEQAALALKNAGQSVTIVAQYRPEEYGRFEAKIHDLREQLLSSSLGSGSASLRSDPKRGFYVRALFDYDKAKDVGFLSQALSFRFGDILHVLDASDEEWWQARLVLPPQQPPDIGFVPSKRRVERREWTRLKAKDRGPGAQGREDAVLSYETVTQMEVHYARPIIILGPTKDRVNDDLLSEFPEKFGSCVPHTTRPKREYEVDGRDYHFVASRERMEKDIQGHKFIEAGQYNSHLYGTSVQSVREVAEQGKHCILDVSANAVRRLQAAQLHPIAIFIRPKSLQNVLEISKRVSEEQARKAFDRATKLEQEFTECFSAMVEGDSFEEIYHKVKRVIEDLSGPFIWVPARERL
SIO_010081: DLG4
subclass of: SO_0000673
so part of: DLG4
location: join(1059766..1059826,1064524..1064660,1067379..1067523,1069646..1069784,1072468..1072624,1074699..1074801,1078907..1079021,1080962..1081138,1083009..1083067,1083826..1083873,1085142..1085243,1086123..1086295,1089313..1089422,1090993..1091084,1092782..1092888)
location: region:1059766-1092888:1
so has part: feature:1059766-1059826:1:exon
so has part: feature:1064524-1064660:1:exon
so has part: feature:1067379-1067523:1:exon
so has part: feature:1069646-1069784:1:exon
so has part: feature:1072468-1072624:1:exon
so has part: feature:1074699-1074801:1:exon
so has part: feature:1078907-1079021:1:exon
so has part: feature:1080962-1081138:1:exon
so has part: feature:1083009-1083067:1:exon
so has part: feature:1083826-1083873:1:exon
so has part: feature:1085142-1085243:1:exon
so has part: feature:1086123-1086295:1:exon
so has part: feature:1089313-1089422:1:exon
so has part: feature:1090993-1091084:1:exon
so has part: feature:1092782-1092888:1:exon

XP_032940198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1059766-1059826:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1064524-1064660:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1067379-1067523:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1069646-1069784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1072468-1072624:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1074699-1074801:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1078907-1079021:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1080962-1081138:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1083009-1083067:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1083826-1083873:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1085142-1085243:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1086123-1086295:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1089313-1089422:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1090993-1091084:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1092782-1092888:1:exon

DLG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: DLG4
product: discs large MAGUK scaffold protein 4, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033084309.2
SIO_010081: DLG4
subclass of: SO_0000673
so part of: DLG4
location: join(1061312..1061370,1064524..1064660,1067379..1067523,1069646..1069784,1072468..1072624,1074699..1074801,1078907..1079021,1080962..1081138,1083009..1083067,1083826..1083873,1085142..1085243,1086123..1086295,1089313..1089422,1090993..1091084,1092782..1093267)
location: region:1061312-1093267:1
so has part: feature:1061312-1061370:1:exon
so has part: feature:1064524-1064660:1:exon
so has part: feature:1067379-1067523:1:exon
so has part: feature:1069646-1069784:1:exon
so has part: feature:1072468-1072624:1:exon
so has part: feature:1074699-1074801:1:exon
so has part: feature:1078907-1079021:1:exon
so has part: feature:1080962-1081138:1:exon
so has part: feature:1083009-1083067:1:exon
so has part: feature:1083826-1083873:1:exon
so has part: feature:1085142-1085243:1:exon
so has part: feature:1086123-1086295:1:exon
so has part: feature:1089313-1089422:1:exon
so has part: feature:1090993-1091084:1:exon
so has part: feature:1092782-1093267:1:exon

position:1061312:1
position: 1061312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1061312-1061370:1:exon

position:1061370:1
position: 1061370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1064524-1064660:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1067379-1067523:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1069646-1069784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1072468-1072624:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1074699-1074801:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1078907-1079021:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1080962-1081138:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1083009-1083067:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1083826-1083873:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1085142-1085243:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1086123-1086295:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1089313-1089422:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1090993-1091084:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1092782-1093267:1:exon

DLG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: DLG4
product: discs large MAGUK scaffold protein 4, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_033084308.2
SIO_010081: DLG4
subclass of: SO_0000673
so part of: DLG4
location: join(1061614..1061639,1064524..1064660,1067379..1067523,1069646..1069784,1072468..1072624,1074699..1074801,1078907..1079021,1080962..1081138,1083009..1083067,1083826..1083873,1085142..1085243,1086123..1086295,1089313..1089422,1090993..1091084,1092782..1093267)
location: region:1061614-1093267:1
so has part: feature:1061614-1061639:1:exon
so has part: feature:1064524-1064660:1:exon
so has part: feature:1067379-1067523:1:exon
so has part: feature:1069646-1069784:1:exon
so has part: feature:1072468-1072624:1:exon
so has part: feature:1074699-1074801:1:exon
so has part: feature:1078907-1079021:1:exon
so has part: feature:1080962-1081138:1:exon
so has part: feature:1083009-1083067:1:exon
so has part: feature:1083826-1083873:1:exon
so has part: feature:1085142-1085243:1:exon
so has part: feature:1086123-1086295:1:exon
so has part: feature:1089313-1089422:1:exon
so has part: feature:1090993-1091084:1:exon
so has part: feature:1092782-1093267:1:exon

position:1061614:1
position: 1061614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1061614-1061639:1:exon

position:1061639:1
position: 1061639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1064524-1064660:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1067379-1067523:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1069646-1069784:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1072468-1072624:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1074699-1074801:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1078907-1079021:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1080962-1081138:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1083009-1083067:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1083826-1083873:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1085142-1085243:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1086123-1086295:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1089313-1089422:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1090993-1091084:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1092782-1093267:1:exon

DLG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: DLG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large homolog 4 isoform X6
translation: MHEDAVAALKNTYDVVYLRVAKATVPGLGDSYGPPDVTGSYSAHLDSELPPQSFLGPEFPPALTPTSPRRFSPGPKELLPDDDVPREPRRIVIPRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRGATHEQAALALKNAGQSVTIVAQYRPEEYGRFEAKIHDLREQLLSSSLGSGSASLRSDPKRGFYVRALFDYDKAKDVGFLSQALSFRFGDILHVLDASDEEWWQARLVLPPQQPPDIGFVPSKRRVERREWTRLKAKDRGPGAQGREDAVLSYETVTQMEVHYARPIIILGPTKDRVNDDLLSEFPEKFGSCVPHTTRPKREYEVDGRDYHFVASRERMEKDIQGHKFIEAGQYNSHLYGTSVQSVREVAEQGKHCILDVSANAVRRLQAAQLHPIAIFIRPKSLQNVLEISKRVSEEQARKAFDRATKLEQEFTECFSAMVEGDSFEEIYHKVKRVIEDLSGPFIWVPARERL
SIO_010081: DLG4
subclass of: SO_0000673
so part of: DLG4
location: join(1067406..1067523,1069646..1069784,1072468..1072624,1074699..1074801,1078907..1079021,1080962..1081138,1083009..1083067,1083826..1083873,1085142..1085243,1086123..1086295,1089313..1089422,1090993..1091084,1092782..1092888)
location: region:1067406-1092888:1
so has part: feature:1067406-1067523:1:exon
so has part: feature:1069646-1069784:1:exon
so has part: feature:1072468-1072624:1:exon
so has part: feature:1074699-1074801:1:exon
so has part: feature:1078907-1079021:1:exon
so has part: feature:1080962-1081138:1:exon
so has part: feature:1083009-1083067:1:exon
so has part: feature:1083826-1083873:1:exon
so has part: feature:1085142-1085243:1:exon
so has part: feature:1086123-1086295:1:exon
so has part: feature:1089313-1089422:1:exon
so has part: feature:1090993-1091084:1:exon
so has part: feature:1092782-1092888:1:exon

XP_032940199.1
type: Protein
SIO_000068: ncbiprotein

position:1067406:1
position: 1067406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1067406-1067523:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1069646-1069784:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1072468-1072624:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1074699-1074801:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1078907-1079021:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1080962-1081138:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1083009-1083067:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1083826-1083873:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1085142-1085243:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1086123-1086295:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1089313-1089422:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1090993-1091084:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1092782-1092888:1:exon

DLG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: DLG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large homolog 4 isoform X6
translation: MHEDAVAALKNTYDVVYLRVAKATVPGLGDSYGPPDVTGSYSAHLDSELPPQSFLGPEFPPALTPTSPRRFSPGPKELLPDDDVPREPRRIVIPRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRGATHEQAALALKNAGQSVTIVAQYRPEEYGRFEAKIHDLREQLLSSSLGSGSASLRSDPKRGFYVRALFDYDKAKDVGFLSQALSFRFGDILHVLDASDEEWWQARLVLPPQQPPDIGFVPSKRRVERREWTRLKAKDRGPGAQGREDAVLSYETVTQMEVHYARPIIILGPTKDRVNDDLLSEFPEKFGSCVPHTTRPKREYEVDGRDYHFVASRERMEKDIQGHKFIEAGQYNSHLYGTSVQSVREVAEQGKHCILDVSANAVRRLQAAQLHPIAIFIRPKSLQNVLEISKRVSEEQARKAFDRATKLEQEFTECFSAMVEGDSFEEIYHKVKRVIEDLSGPFIWVPARERL
SIO_010081: DLG4
subclass of: SO_0000673
so part of: DLG4
location: join(1067406..1067523,1069646..1069784,1072468..1072624,1074699..1074801,1078907..1079021,1080962..1081138,1083009..1083067,1083826..1083873,1085142..1085243,1086123..1086295,1089313..1089422,1090993..1091084,1092782..1092888)
location: region:1067406-1092888:1
so has part: feature:1067406-1067523:1:exon
so has part: feature:1069646-1069784:1:exon
so has part: feature:1072468-1072624:1:exon
so has part: feature:1074699-1074801:1:exon
so has part: feature:1078907-1079021:1:exon
so has part: feature:1080962-1081138:1:exon
so has part: feature:1083009-1083067:1:exon
so has part: feature:1083826-1083873:1:exon
so has part: feature:1085142-1085243:1:exon
so has part: feature:1086123-1086295:1:exon
so has part: feature:1089313-1089422:1:exon
so has part: feature:1090993-1091084:1:exon
so has part: feature:1092782-1092888:1:exon

XP_032940200.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1067406-1067523:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1069646-1069784:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1072468-1072624:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1074699-1074801:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1078907-1079021:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1080962-1081138:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1083009-1083067:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1083826-1083873:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1085142-1085243:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1086123-1086295:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1089313-1089422:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1090993-1091084:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1092782-1092888:1:exon

MPDU1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: MPDU1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1095416..1109544)
location: region:1095416-1109544:-1
so has part: feature:1095416-1109544:-1:exon
subclass of: SO_0000010

117009936
type: Gene
SIO_000068: ncbigene

position:1095416:-1
position: 1095416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1109544:-1
position: 1109544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1095416-1109544:-1:exon

MPDU1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: MPDU1
product: mannose-P-dolichol utilization defect 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033084297.1
SIO_010081: MPDU1
subclass of: SO_0000673
so part of: MPDU1
location: complement(join(1095416..1095560,1098931..1099041,1102413..1102531,1103746..1103831,1107128..1107260,1109030..1109095,1109413..1109544))
location: region:1095416-1109544:-1
so has part: feature:1109413-1109544:-1:exon
so has part: feature:1109030-1109095:-1:exon
so has part: feature:1107128-1107260:-1:exon
so has part: feature:1103746-1103831:-1:exon
so has part: feature:1102413-1102531:-1:exon
so has part: feature:1098931-1099041:-1:exon
so has part: feature:1095416-1095560:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1109413-1109544:-1:exon

position:1109413:-1
position: 1109413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1109030-1109095:-1:exon

position:1109030:-1
position: 1109030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1109095:-1
position: 1109095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1107128-1107260:-1:exon

position:1107128:-1
position: 1107128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1107260:-1
position: 1107260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1103746-1103831:-1:exon

position:1103746:-1
position: 1103746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1103831:-1
position: 1103831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1102413-1102531:-1:exon

position:1102413:-1
position: 1102413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1102531:-1
position: 1102531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1098931-1099041:-1:exon

position:1098931:-1
position: 1098931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1099041:-1
position: 1099041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1095416-1095560:-1:exon

position:1095560:-1
position: 1095560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MPDU1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: MPDU1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mannose-P-dolichol utilization defect 1 protein
translation: MEPLRPLLVPFLLPEHCFDQFFLRFQLLDVPCLKILLSKALGYGIVAGSVLVKVPQLLKVWGSRSGQGLSLPSLLLELLALGGSVSYGWARRFPFSAWGESLFLLLQSLSLLFLVLHFRGSTGPGLALLTLFGAFLGVLVSPLTPLSFVTALQALNLPIIILSRLLQIVTNARQGHTGQLSGVTTGLLFGGALARIFTSLTETGDLLLASTFAASAACNGVLLGQVLLLGGSRDPHPKKE
SIO_010081: MPDU1
subclass of: SO_0000673
so part of: MPDU1
location: complement(join(1095441..1095560,1098931..1099041,1102413..1102531,1103746..1103831,1107128..1107260,1109030..1109095,1109413..1109500))
location: region:1095441-1109500:-1
so has part: feature:1109413-1109500:-1:exon
so has part: feature:1109030-1109095:-1:exon
so has part: feature:1107128-1107260:-1:exon
so has part: feature:1103746-1103831:-1:exon
so has part: feature:1102413-1102531:-1:exon
so has part: feature:1098931-1099041:-1:exon
so has part: feature:1095441-1095560:-1:exon

XP_032940188.1
type: Protein
SIO_000068: ncbiprotein

position:1095441:-1
position: 1095441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1109500:-1
position: 1109500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1109413-1109500:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1109030-1109095:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1107128-1107260:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1103746-1103831:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1102413-1102531:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1098931-1099041:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1095441-1095560:-1:exon

LOC117009939
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009939
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1117716..1125272)
location: region:1117716-1125272:-1
so has part: feature:1117716-1125272:-1:exon
subclass of: SO_0000010

117009939
type: Gene
SIO_000068: ncbigene

position:1117716:-1
position: 1117716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1125272:-1
position: 1125272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1117716-1125272:-1:exon

LOC117009939
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009939
product: eukaryotic initiation factor 4A-I-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033084299.1
SIO_010081: LOC117009939
subclass of: SO_0000673
so part of: LOC117009939
location: complement(join(1117716..1117904,1118876..1118955,1123781..1123870,1125053..1125272))
location: region:1117716-1125272:-1
so has part: feature:1125053-1125272:-1:exon
so has part: feature:1123781-1123870:-1:exon
so has part: feature:1118876-1118955:-1:exon
so has part: feature:1117716-1117904:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1125053-1125272:-1:exon

position:1125053:-1
position: 1125053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1123781-1123870:-1:exon

position:1123781:-1
position: 1123781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1123870:-1
position: 1123870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1118876-1118955:-1:exon

position:1118876:-1
position: 1118876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1118955:-1
position: 1118955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1117716-1117904:-1:exon

position:1117904:-1
position: 1117904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009939
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009939
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic initiation factor 4A-I-like
translation: MHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTAIEEMPLNVADLI
SIO_010081: LOC117009939
subclass of: SO_0000673
so part of: LOC117009939
location: complement(join(1117760..1117904,1118876..1118955,1123781..1123870,1125053..1125085))
location: region:1117760-1125085:-1
so has part: feature:1125053-1125085:-1:exon
so has part: feature:1123781-1123870:-1:exon
so has part: feature:1118876-1118955:-1:exon
so has part: feature:1117760-1117904:-1:exon

XP_032940190.1
type: Protein
SIO_000068: ncbiprotein

position:1117760:-1
position: 1117760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1125085:-1
position: 1125085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1125053-1125085:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1123781-1123870:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1118876-1118955:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1117760-1117904:-1:exon

CHRNB1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: CHRNB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1132809..1168658)
location: region:1132809-1168658:-1
so has part: feature:1132809-1168658:-1:exon
subclass of: SO_0000010

117009909
type: Gene
SIO_000068: ncbigene

position:1132809:-1
position: 1132809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1168658:-1
position: 1168658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1132809-1168658:-1:exon

CHRNB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CHRNB1
product: cholinergic receptor nicotinic beta 1 subunit
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042780120.1
SIO_010081: CHRNB1
subclass of: SO_0000673
so part of: CHRNB1
location: complement(join(1132809..1133369,1135045..1135198,1135250..1135302,1139762..1139985,1147097..1147282,1148657..1148722,1151548..1151671,1152993..1153101,1155665..1155774,1159014..1159058,1160518..1160639,1168595..1168658))
location: region:1132809-1168658:-1
so has part: feature:1168595-1168658:-1:exon
so has part: feature:1160518-1160639:-1:exon
so has part: feature:1159014-1159058:-1:exon
so has part: feature:1155665-1155774:-1:exon
so has part: feature:1152993-1153101:-1:exon
so has part: feature:1151548-1151671:-1:exon
so has part: feature:1148657-1148722:-1:exon
so has part: feature:1147097-1147282:-1:exon
so has part: feature:1139762-1139985:-1:exon
so has part: feature:1135250-1135302:-1:exon
so has part: feature:1135045-1135198:-1:exon
so has part: feature:1132809-1133369:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1168595-1168658:-1:exon

position:1168595:-1
position: 1168595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1160518-1160639:-1:exon

position:1160518:-1
position: 1160518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1160639:-1
position: 1160639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1159014-1159058:-1:exon

position:1159014:-1
position: 1159014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1159058:-1
position: 1159058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1155665-1155774:-1:exon

position:1155665:-1
position: 1155665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1155774:-1
position: 1155774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1152993-1153101:-1:exon

position:1152993:-1
position: 1152993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1153101:-1
position: 1153101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1151548-1151671:-1:exon

position:1151548:-1
position: 1151548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1151671:-1
position: 1151671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1148657-1148722:-1:exon

position:1148657:-1
position: 1148657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1148722:-1
position: 1148722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1147097-1147282:-1:exon

position:1147097:-1
position: 1147097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1147282:-1
position: 1147282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1139762-1139985:-1:exon

position:1139762:-1
position: 1139762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1139985:-1
position: 1139985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1135250-1135302:-1:exon

position:1135250:-1
position: 1135250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1135302:-1
position: 1135302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1135045-1135198:-1:exon

position:1135045:-1
position: 1135045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1135198:-1
position: 1135198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1132809-1133369:-1:exon

position:1133369:-1
position: 1133369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHRNB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CHRNB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acetylcholine receptor subunit beta
translation: MAGPRVRKDKAAAHFLPQLLEGWGSPLPWLRGRYRAGVRPGGAGGEPVLVTVGLELAQLVGLDEKNEELTTKVYLNLRWRDPRLSWDPPELGGAAALRVPADNIWLPDVGLDNNNDGEFGVSLGVRAVVTSGGDVTWRPPGLFRSRCPIRVSHFPFDWQNCSLNFRSGSYGPRELRLQLGGAQVALPPDFQENGQWTLVHRSGSTWGPPGSPEENGQWTLVHRSGSTWGPPGSPEGVSFHLVLRRKPLFYLATVLVPCVLITLLAVGVFHLPPDAGEKMSLSLFALLTLTVFLLLLADKVPATSLQVPLIGRYLTATLVLLTLVVALSVGVLNLHHRSPGTHGMPTWARQVFLQRLPPLLGLRPSPTPDEYFLRRPSPLRAAPNPPGLAPKFAPPEVREAAAAIGAIARSLRHRERRQQAQDEWRALAMAADRLCLWAVLGLTGACALGTGLDAALHRPPASPFP
SIO_010081: CHRNB1
subclass of: SO_0000673
so part of: CHRNB1
location: complement(join(1133229..1133369,1135045..1135198,1135250..1135302,1139762..1139985,1147097..1147282,1148657..1148722,1151548..1151671,1152993..1153101,1155665..1155774,1159014..1159058,1160518..1160639,1168595..1168658))
location: region:1133229-1168658:-1
so has part: feature:1168595-1168658:-1:exon
so has part: feature:1160518-1160639:-1:exon
so has part: feature:1159014-1159058:-1:exon
so has part: feature:1155665-1155774:-1:exon
so has part: feature:1152993-1153101:-1:exon
so has part: feature:1151548-1151671:-1:exon
so has part: feature:1148657-1148722:-1:exon
so has part: feature:1147097-1147282:-1:exon
so has part: feature:1139762-1139985:-1:exon
so has part: feature:1135250-1135302:-1:exon
so has part: feature:1135045-1135198:-1:exon
so has part: feature:1133229-1133369:-1:exon

XP_042636054.1
type: Protein
SIO_000068: ncbiprotein

position:1133229:-1
position: 1133229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1168595-1168658:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1160518-1160639:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1159014-1159058:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1155665-1155774:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1152993-1153101:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1151548-1151671:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1148657-1148722:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1147097-1147282:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1139762-1139985:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1135250-1135302:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1135045-1135198:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1133229-1133369:-1:exon

LOC117009910
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009910
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1165942..1176193)
location: region:1165942-1176193:-1
so has part: feature:1165942-1176193:-1:exon
subclass of: SO_0000010

117009910
type: Gene
SIO_000068: ncbigene

position:1165942:-1
position: 1165942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1176193:-1
position: 1176193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1165942-1176193:-1:exon

LOC117009910
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 91951
gene: LOC117009910
product: fibroblast growth factor 11-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_006163143.1
SIO_010081: LOC117009910
so part of: LOC117009910
location: complement(join(1165942..1166001,1168428..1169889,1170843..1170946,1173487..1173597,1174546..1174568))
location: region:1165942-1174568:-1
so has part: feature:1174546-1174568:-1:exon
so has part: feature:1173487-1173597:-1:exon
so has part: feature:1170843-1170946:-1:exon
so has part: feature:1168428-1169889:-1:exon
so has part: feature:1165942-1166001:-1:exon

position:1174568:-1
position: 1174568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1174546-1174568:-1:exon

position:1174546:-1
position: 1174546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1173487-1173597:-1:exon

position:1173487:-1
position: 1173487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1173597:-1
position: 1173597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1170843-1170946:-1:exon

position:1170843:-1
position: 1170843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1170946:-1
position: 1170946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1168428-1169889:-1:exon

position:1168428:-1
position: 1168428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1169889:-1
position: 1169889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1165942-1166001:-1:exon

position:1166001:-1
position: 1166001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009910
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 91951
gene: LOC117009910
product: fibroblast growth factor 11-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_006163142.1
SIO_010081: LOC117009910
so part of: LOC117009910
location: complement(join(1165946..1166001,1168595..1169889,1170843..1170946,1173487..1173597,1176144..1176193))
location: region:1165946-1176193:-1
so has part: feature:1176144-1176193:-1:exon
so has part: feature:1173487-1173597:-1:exon
so has part: feature:1170843-1170946:-1:exon
so has part: feature:1168595-1169889:-1:exon
so has part: feature:1165946-1166001:-1:exon

position:1165946:-1
position: 1165946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1176144-1176193:-1:exon

position:1176144:-1
position: 1176144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1173487-1173597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1170843-1170946:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1168595-1169889:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1165946-1166001:-1:exon

LOC117009910
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009910
product: fibroblast growth factor 11-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_033084265.2
SIO_010081: LOC117009910
subclass of: SO_0000673
so part of: LOC117009910
location: complement(join(1168011..1169889,1170843..1170946,1173487..1173597,1176144..1176193))
location: region:1168011-1176193:-1
so has part: feature:1176144-1176193:-1:exon
so has part: feature:1173487-1173597:-1:exon
so has part: feature:1170843-1170946:-1:exon
so has part: feature:1168011-1169889:-1:exon

position:1168011:-1
position: 1168011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1176144-1176193:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1173487-1173597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1170843-1170946:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1168011-1169889:-1:exon

LOC117009910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009910
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 11-like
translation: MGPDGRLDGTWEEAGPGTLFNLIPVGLRVVAIQGARAGRYVAMNGAGVVYASVHFTPECRFKECVFENYHVLYASALYRQRRSGRAWYLGLDRHGRPMAGPRVRKDKAAAHFLPQLLEGEPQNILNLP
SIO_010081: LOC117009910
subclass of: SO_0000673
so part of: LOC117009910
location: complement(join(1169659..1169889,1170843..1170946,1173487..1173538))
location: region:1169659-1173538:-1
so has part: feature:1173487-1173538:-1:exon
so has part: feature:1170843-1170946:-1:exon
so has part: feature:1169659-1169889:-1:exon

XP_032940156.2
type: Protein
SIO_000068: ncbiprotein

position:1169659:-1
position: 1169659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1173538:-1
position: 1173538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1173487-1173538:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1170843-1170946:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1169659-1169889:-1:exon

NLGN2
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: NLGN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1182095..1202276)
location: region:1182095-1202276:-1
so has part: feature:1182095-1202276:-1:exon
subclass of: SO_0000010

117009944
type: Gene
SIO_000068: ncbigene

position:1182095:-1
position: 1182095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202276:-1
position: 1202276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1182095-1202276:-1:exon

NLGN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NLGN2
product: neuroligin 2, transcript variant X16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 28 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084326.2
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: complement(join(1182095..1182502,1182558..1183095,1184972..1185761,1189104..1189289,1191321..1191470,1202070..1202276))
location: region:1182095-1202276:-1
so has part: feature:1202070-1202276:-1:exon
so has part: feature:1191321-1191470:-1:exon
so has part: feature:1189104-1189289:-1:exon
so has part: feature:1184972-1185761:-1:exon
so has part: feature:1182558-1183095:-1:exon
so has part: feature:1182095-1182502:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1202070-1202276:-1:exon

position:1202070:-1
position: 1202070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1191321-1191470:-1:exon

position:1191321:-1
position: 1191321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1191470:-1
position: 1191470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1189104-1189289:-1:exon

position:1189104:-1
position: 1189104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1189289:-1
position: 1189289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1184972-1185761:-1:exon

position:1184972:-1
position: 1184972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1185761:-1
position: 1185761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1182558-1183095:-1:exon

position:1182558:-1
position: 1182558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1183095:-1
position: 1183095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1182095-1182502:-1:exon

position:1182502:-1
position: 1182502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NLGN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NLGN2
product: neuroligin 2, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 24 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033084325.2
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: complement(join(1182095..1182502,1182561..1183095,1184972..1185761,1189104..1189289,1191321..1191470,1193428..1193484,1202070..1202275))
location: region:1182095-1202275:-1
so has part: feature:1202070-1202275:-1:exon
so has part: feature:1193428-1193484:-1:exon
so has part: feature:1191321-1191470:-1:exon
so has part: feature:1189104-1189289:-1:exon
so has part: feature:1184972-1185761:-1:exon
so has part: feature:1182561-1183095:-1:exon
so has part: feature:1182095-1182502:-1:exon

position:1202275:-1
position: 1202275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1202070-1202275:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1193428-1193484:-1:exon

position:1193428:-1
position: 1193428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1193484:-1
position: 1193484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1191321-1191470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1189104-1189289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1184972-1185761:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1182561-1183095:-1:exon

position:1182561:-1
position: 1182561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1182095-1182502:-1:exon

NLGN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: NLGN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroligin-2 isoform X8
translation: MLPLWLSDNLEAAGAYVAAQSEDCLYLNLYVPTEDDIRDSGKKPVMLFLHGGSYMEGTGNMFDGSVLAAYGNVIVVTMNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWLHENVGHFGGDPQRITIFGSGAGAACVSLLILSHHSEGLFQKAIAQSGTAIASWSVNYQPLKYTRLLAAKVGCERADTGAAVECLRRQPFRALVDQDVQPARYHVAFGPVVDGDVVPDDPEILMQQGEFLNYDILIGVNQGEGLKFVEDSLESEDGISASYFDFTVSNFVDNLYGYPEGKDILRETIKFMYTDWADRDNGEMRRKTLLALFTDHQWVAPAVATAKLHAEYQSPVYFYTFYHHCQTDARPEWADAAHGDEIPYVFGVPMVGATDLFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVVWTRFDGKDKRYLHIGLKPRVRDHYRANKVAFWLELVPHLHNLHQLPHASTTTRLPPPPGPPRRAPATRRPPPSSAPPGRDDRRDDRDDDDDDEDEDGGRGGRRRFAPFPGDSRDYSTELSVTVAVGASLLFLNILAFAALYYKRDKRPPPDPRGVSGRGVAGAAPNDLLAPGEEELVQLQMKHPKLGVGVGVGGDPEARPGVAVAVAGPPDYTLALRRAPEDVPLLPPNTITMVPGGLQALHPPFGTPFPPPGHNSALPHPHSTTRV
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: complement(join(1182164..1182502,1182558..1183095,1184972..1185761,1189104..1189289,1191321..1191470,1202070..1202175))
location: region:1182164-1202175:-1
so has part: feature:1202070-1202175:-1:exon
so has part: feature:1191321-1191470:-1:exon
so has part: feature:1189104-1189289:-1:exon
so has part: feature:1184972-1185761:-1:exon
so has part: feature:1182558-1183095:-1:exon
so has part: feature:1182164-1182502:-1:exon

XP_032940217.1
type: Protein
SIO_000068: ncbiprotein

position:1182164:-1
position: 1182164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202175:-1
position: 1202175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1202070-1202175:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1191321-1191470:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1189104-1189289:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1184972-1185761:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1182558-1183095:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1182164-1182502:-1:exon

NLGN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: NLGN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroligin-2 isoform X7
translation: MLPLWLSDNLEAAGAYVAAQSEDCLYLNLYVPTEDGLLGKKREDGAAGGPPPDSDIRDSGKKPVMLFLHGGSYMEGTGNMFDGSVLAAYGNVIVVTMNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWLHENVGHFGGDPQRITIFGSGAGAACVSLLILSHHSEGLFQKAIAQSGTAIASWSVNYQPLKYTRLLAAKVGCERADTGAAVECLRRQPFRALVDQDVQPARYHVAFGPVVDGDVVPDDPEILMQQGEFLNYDILIGVNQGEGLKFVEDSLESEDGISASYFDFTVSNFVDNLYGYPEGKDILRETIKFMYTDWADRDNGEMRRKTLLALFTDHQWVAPAVATAKLHAEYQSPVYFYTFYHHCQTDARPEWADAAHGDEIPYVFGVPMVGATDLFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVVWTRFDGKDKRYLHIGLKPRVRDHYRANKVAFWLELVPHLHNLHQLPHASTTTRLPPPPGPPRRAPATRRPPPSSAPPGRDDRRDDRDDDDDDEDEDGGRGGRRRFAPFPGDSRDYSTELSVTVAVGASLLFLNILAFAALYYKRDKRPPPDPRGSGRGVAGAAPNDLLAPGEEELVQLQMKHPKLGVGVGVGGDPEARPGVAVAVAGPPDYTLALRRAPEDVPLLPPNTITMVPGGLQALHPPFGTPFPPPGHNSALPHPHSTTRV
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: complement(join(1182164..1182502,1182561..1183095,1184972..1185761,1189104..1189289,1191321..1191470,1193428..1193484,1202070..1202175))
location: region:1182164-1202175:-1
so has part: feature:1202070-1202175:-1:exon
so has part: feature:1193428-1193484:-1:exon
so has part: feature:1191321-1191470:-1:exon
so has part: feature:1189104-1189289:-1:exon
so has part: feature:1184972-1185761:-1:exon
so has part: feature:1182561-1183095:-1:exon
so has part: feature:1182164-1182502:-1:exon

XP_032940216.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1202070-1202175:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1193428-1193484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1191321-1191470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1189104-1189289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1184972-1185761:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1182561-1183095:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1182164-1182502:-1:exon

NLGN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NLGN2
product: neuroligin 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_033084316.2
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: complement(join(1182368..1183095,1184972..1185761,1189104..1189289,1191321..1191470,1193428..1193484,1202070..1202272))
location: region:1182368-1202272:-1
so has part: feature:1202070-1202272:-1:exon
so has part: feature:1193428-1193484:-1:exon
so has part: feature:1191321-1191470:-1:exon
so has part: feature:1189104-1189289:-1:exon
so has part: feature:1184972-1185761:-1:exon
so has part: feature:1182368-1183095:-1:exon

position:1182368:-1
position: 1182368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202272:-1
position: 1202272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1202070-1202272:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1193428-1193484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1191321-1191470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1189104-1189289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1184972-1185761:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1182368-1183095:-1:exon

NLGN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NLGN2
product: neuroligin 2, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033084319.1
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: complement(join(1182369..1183095,1184972..1185761,1189104..1189289,1191321..1191470,1193428..1193484,1201268..1201340))
location: region:1182369-1201340:-1
so has part: feature:1201268-1201340:-1:exon
so has part: feature:1193428-1193484:-1:exon
so has part: feature:1191321-1191470:-1:exon
so has part: feature:1189104-1189289:-1:exon
so has part: feature:1184972-1185761:-1:exon
so has part: feature:1182369-1183095:-1:exon

position:1182369:-1
position: 1182369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1201340:-1
position: 1201340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1201268-1201340:-1:exon

position:1201268:-1
position: 1201268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1193428-1193484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1191321-1191470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1189104-1189289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1184972-1185761:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1182369-1183095:-1:exon

NLGN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NLGN2
product: neuroligin 2, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033084324.2
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: complement(join(1182369..1183095,1184972..1185761,1189104..1189289,1191321..1191470,1193428..1193484,1200826..1200857))
location: region:1182369-1200857:-1
so has part: feature:1200826-1200857:-1:exon
so has part: feature:1193428-1193484:-1:exon
so has part: feature:1191321-1191470:-1:exon
so has part: feature:1189104-1189289:-1:exon
so has part: feature:1184972-1185761:-1:exon
so has part: feature:1182369-1183095:-1:exon

position:1200857:-1
position: 1200857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1200826-1200857:-1:exon

position:1200826:-1
position: 1200826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1193428-1193484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1191321-1191470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1189104-1189289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1184972-1185761:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1182369-1183095:-1:exon

NLGN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NLGN2
product: neuroligin 2, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033084320.1
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: complement(join(1182369..1183095,1184972..1185761,1189104..1189289,1191321..1191470,1193428..1193484,1200228..1200295))
location: region:1182369-1200295:-1
so has part: feature:1200228-1200295:-1:exon
so has part: feature:1193428-1193484:-1:exon
so has part: feature:1191321-1191470:-1:exon
so has part: feature:1189104-1189289:-1:exon
so has part: feature:1184972-1185761:-1:exon
so has part: feature:1182369-1183095:-1:exon

position:1200295:-1
position: 1200295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1200228-1200295:-1:exon

position:1200228:-1
position: 1200228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1193428-1193484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1191321-1191470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1189104-1189289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1184972-1185761:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1182369-1183095:-1:exon

NLGN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NLGN2
product: neuroligin 2, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_033084322.1
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: complement(join(1182369..1183095,1184972..1185761,1189104..1189289,1191321..1191470,1193428..1193484,1199930..1199991))
location: region:1182369-1199991:-1
so has part: feature:1199930-1199991:-1:exon
so has part: feature:1193428-1193484:-1:exon
so has part: feature:1191321-1191470:-1:exon
so has part: feature:1189104-1189289:-1:exon
so has part: feature:1184972-1185761:-1:exon
so has part: feature:1182369-1183095:-1:exon

position:1199991:-1
position: 1199991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1199930-1199991:-1:exon

position:1199930:-1
position: 1199930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1193428-1193484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1191321-1191470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1189104-1189289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1184972-1185761:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1182369-1183095:-1:exon

NLGN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NLGN2
product: neuroligin 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033084315.1
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: complement(join(1182369..1183095,1184972..1185761,1189104..1189289,1191321..1191470,1199930..1199990))
location: region:1182369-1199990:-1
so has part: feature:1199930-1199990:-1:exon
so has part: feature:1191321-1191470:-1:exon
so has part: feature:1189104-1189289:-1:exon
so has part: feature:1184972-1185761:-1:exon
so has part: feature:1182369-1183095:-1:exon

position:1199990:-1
position: 1199990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1199930-1199990:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1191321-1191470:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1189104-1189289:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1184972-1185761:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1182369-1183095:-1:exon

NLGN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NLGN2
product: neuroligin 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033084317.1
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: complement(join(1182369..1183095,1184972..1185761,1189104..1189289,1191321..1191470,1193428..1193484,1199485..1199505))
location: region:1182369-1199505:-1
so has part: feature:1199485-1199505:-1:exon
so has part: feature:1193428-1193484:-1:exon
so has part: feature:1191321-1191470:-1:exon
so has part: feature:1189104-1189289:-1:exon
so has part: feature:1184972-1185761:-1:exon
so has part: feature:1182369-1183095:-1:exon

position:1199505:-1
position: 1199505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1199485-1199505:-1:exon

position:1199485:-1
position: 1199485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1193428-1193484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1191321-1191470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1189104-1189289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1184972-1185761:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1182369-1183095:-1:exon

NLGN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NLGN2
product: neuroligin 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_033084313.1
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: complement(join(1182369..1183095,1184972..1185761,1189104..1189289,1191321..1191470,1193428..1193484,1199348..1199416))
location: region:1182369-1199416:-1
so has part: feature:1199348-1199416:-1:exon
so has part: feature:1193428-1193484:-1:exon
so has part: feature:1191321-1191470:-1:exon
so has part: feature:1189104-1189289:-1:exon
so has part: feature:1184972-1185761:-1:exon
so has part: feature:1182369-1183095:-1:exon

position:1199416:-1
position: 1199416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1199348-1199416:-1:exon

position:1199348:-1
position: 1199348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1193428-1193484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1191321-1191470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1189104-1189289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1184972-1185761:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1182369-1183095:-1:exon

NLGN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NLGN2
product: neuroligin 2, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_033084323.1
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: complement(join(1182369..1183095,1184972..1185761,1189104..1189289,1191321..1191470,1193428..1193484,1199184..1199223))
location: region:1182369-1199223:-1
so has part: feature:1199184-1199223:-1:exon
so has part: feature:1193428-1193484:-1:exon
so has part: feature:1191321-1191470:-1:exon
so has part: feature:1189104-1189289:-1:exon
so has part: feature:1184972-1185761:-1:exon
so has part: feature:1182369-1183095:-1:exon

position:1199223:-1
position: 1199223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1199184-1199223:-1:exon

position:1199184:-1
position: 1199184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1193428-1193484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1191321-1191470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1189104-1189289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1184972-1185761:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1182369-1183095:-1:exon

NLGN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NLGN2
product: neuroligin 2, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_033084318.1
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: complement(join(1182369..1183095,1184972..1185761,1189104..1189289,1191321..1191470,1193428..1193484,1199039..1199097))
location: region:1182369-1199097:-1
so has part: feature:1199039-1199097:-1:exon
so has part: feature:1193428-1193484:-1:exon
so has part: feature:1191321-1191470:-1:exon
so has part: feature:1189104-1189289:-1:exon
so has part: feature:1184972-1185761:-1:exon
so has part: feature:1182369-1183095:-1:exon

position:1199097:-1
position: 1199097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1199039-1199097:-1:exon

position:1199039:-1
position: 1199039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1193428-1193484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1191321-1191470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1189104-1189289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1184972-1185761:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1182369-1183095:-1:exon

NLGN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NLGN2
product: neuroligin 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_033084314.1
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: complement(join(1182369..1183095,1184972..1185761,1189104..1189289,1191321..1191470,1199039..1199080))
location: region:1182369-1199080:-1
so has part: feature:1199039-1199080:-1:exon
so has part: feature:1191321-1191470:-1:exon
so has part: feature:1189104-1189289:-1:exon
so has part: feature:1184972-1185761:-1:exon
so has part: feature:1182369-1183095:-1:exon

position:1199080:-1
position: 1199080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1199039-1199080:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1191321-1191470:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1189104-1189289:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1184972-1185761:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1182369-1183095:-1:exon

NLGN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NLGN2
product: neuroligin 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_042780129.1
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: complement(join(1182369..1183095,1184972..1185761,1189104..1189289,1191241..1191281))
location: region:1182369-1191281:-1
so has part: feature:1191241-1191281:-1:exon
so has part: feature:1189104-1189289:-1:exon
so has part: feature:1184972-1185761:-1:exon
so has part: feature:1182369-1183095:-1:exon

position:1191281:-1
position: 1191281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1191241-1191281:-1:exon

position:1191241:-1
position: 1191241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1189104-1189289:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1184972-1185761:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1182369-1183095:-1:exon

NLGN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NLGN2
product: neuroligin 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_042780128.1
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: complement(join(1182369..1183095,1184972..1185761,1189104..1189289,1190975..1191016))
location: region:1182369-1191016:-1
so has part: feature:1190975-1191016:-1:exon
so has part: feature:1189104-1189289:-1:exon
so has part: feature:1184972-1185761:-1:exon
so has part: feature:1182369-1183095:-1:exon

position:1191016:-1
position: 1191016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1190975-1191016:-1:exon

position:1190975:-1
position: 1190975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1189104-1189289:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1184972-1185761:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1182369-1183095:-1:exon

NLGN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NLGN2
product: neuroligin 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_042780127.1
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: complement(join(1182369..1183095,1184972..1185761,1189104..1189289,1190795..1190857))
location: region:1182369-1190857:-1
so has part: feature:1190795-1190857:-1:exon
so has part: feature:1189104-1189289:-1:exon
so has part: feature:1184972-1185761:-1:exon
so has part: feature:1182369-1183095:-1:exon

position:1190857:-1
position: 1190857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1190795-1190857:-1:exon

position:1190795:-1
position: 1190795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1189104-1189289:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1184972-1185761:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1182369-1183095:-1:exon

NLGN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: NLGN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroligin-2 isoform X6
translation: MLPLWLSDNLEAAGAYVAAQSEDCLYLNLYVPTEDGLLGKKREDGAAGGPPPDSDIRDSGKKPVMLFLHGGSYMEGTGNMFDGSVLAAYGNVIVVTMNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWLHENVGHFGGDPQRITIFGSGAGAACVSLLILSHHSEGLFQKAIAQSGTAIASWSVNYQPLKYTRLLAAKVGCERADTGAAVECLRRQPFRALVDQDVQPARYHVAFGPVVDGDVVPDDPEILMQQGEFLNYDILIGVNQGEGLKFVEDSLESEDGISASYFDFTVSNFVDNLYGYPEGKDILRETIKFMYTDWADRDNGEMRRKTLLALFTDHQWVAPAVATAKLHAEYQSPVYFYTFYHHCQTDARPEWADAAHGDEIPYVFGVPMVGATDLFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVVWTRFDGKDKRYLHIGLKPRVRDHYRANKVAFWLELVPHLHNLHQLPHASTTTRLPPPPGPPRRAPATRRPPPSSAPPGRDDRRDDRDDDDDDEDEDGGRGGRRRFAPFPGDSRDYSTELSVTVAVGASLLFLNILAFAALYYKRDKRPPPDPRGVVGGVGAVSIPPRRLTPPPERPRRGRSGAQRPAGPRRGGAGAAADEAPQAGRGRGGGG
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: complement(join(1182384..1183095,1184972..1185761,1189104..1189289,1191321..1191470,1193428..1193484,1202070..1202175))
location: region:1182384-1202175:-1
so has part: feature:1202070-1202175:-1:exon
so has part: feature:1193428-1193484:-1:exon
so has part: feature:1191321-1191470:-1:exon
so has part: feature:1189104-1189289:-1:exon
so has part: feature:1184972-1185761:-1:exon
so has part: feature:1182384-1183095:-1:exon

XP_032940207.1
type: Protein
SIO_000068: ncbiprotein

position:1182384:-1
position: 1182384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1202070-1202175:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1193428-1193484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1191321-1191470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1189104-1189289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1184972-1185761:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1182384-1183095:-1:exon

NLGN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: NLGN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroligin-2 isoform X1
translation: MAAQSEDCLYLNLYVRTEDGLLGKKREDGAAGGPPPDSDIRDSGKKPVMLFLHGGSYMEGTGNMFDGSVLAAYGNVIVVTMNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWLHENVGHFGGDPQRITIFGSGAGAACVSLLILSHHSEGLFQKAIAQSGTAIASWSVNYQPLKYTRLLAAKVGCERADTGAAVECLRRQPFRALVDQDVQPARYHVAFGPVVDGDVVPDDPEILMQQGEFLNYDILIGVNQGEGLKFVEDSLESEDGISASYFDFTVSNFVDNLYGYPEGKDILRETIKFMYTDWADRDNGEMRRKTLLALFTDHQWVAPAVATAKLHAEYQSPVYFYTFYHHCQTDARPEWADAAHGDEIPYVFGVPMVGATDLFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVVWTRFDGKDKRYLHIGLKPRVRDHYRANKVAFWLELVPHLHNLHQLPHASTTTRLPPPPGPPRRAPATRRPPPSSAPPGRDDRRDDRDDDDDDEDEDGGRGGRRRFAPFPGDSRDYSTELSVTVAVGASLLFLNILAFAALYYKRDKRPPPDPRGVVGGVGAVSIPPRRLTPPPERPRRGRSGAQRPAGPRRGGAGAAADEAPQAGRGRGGGG
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: complement(join(1182384..1183095,1184972..1185761,1189104..1189289,1191321..1191470,1193428..1193484,1199348..1199405))
location: region:1182384-1199405:-1
so has part: feature:1199348-1199405:-1:exon
so has part: feature:1193428-1193484:-1:exon
so has part: feature:1191321-1191470:-1:exon
so has part: feature:1189104-1189289:-1:exon
so has part: feature:1184972-1185761:-1:exon
so has part: feature:1182384-1183095:-1:exon

XP_032940204.1
type: Protein
SIO_000068: ncbiprotein

position:1199405:-1
position: 1199405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1199348-1199405:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1193428-1193484:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1191321-1191470:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1189104-1189289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1184972-1185761:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1182384-1183095:-1:exon

NLGN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: NLGN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroligin-2 isoform X2
translation: MLFLHGGSYMEGTGNMFDGSVLAAYGNVIVVTMNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWLHENVGHFGGDPQRITIFGSGAGAACVSLLILSHHSEGLFQKAIAQSGTAIASWSVNYQPLKYTRLLAAKVGCERADTGAAVECLRRQPFRALVDQDVQPARYHVAFGPVVDGDVVPDDPEILMQQGEFLNYDILIGVNQGEGLKFVEDSLESEDGISASYFDFTVSNFVDNLYGYPEGKDILRETIKFMYTDWADRDNGEMRRKTLLALFTDHQWVAPAVATAKLHAEYQSPVYFYTFYHHCQTDARPEWADAAHGDEIPYVFGVPMVGATDLFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVVWTRFDGKDKRYLHIGLKPRVRDHYRANKVAFWLELVPHLHNLHQLPHASTTTRLPPPPGPPRRAPATRRPPPSSAPPGRDDRRDDRDDDDDDEDEDGGRGGRRRFAPFPGDSRDYSTELSVTVAVGASLLFLNILAFAALYYKRDKRPPPDPRGVVGGVGAVSIPPRRLTPPPERPRRGRSGAQRPAGPRRGGAGAAADEAPQAGRGRGGGG
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: complement(join(1182384..1183095,1184972..1185761,1189104..1189289,1191321..1191441))
location: region:1182384-1191441:-1
so has part: feature:1191321-1191441:-1:exon
so has part: feature:1189104-1189289:-1:exon
so has part: feature:1184972-1185761:-1:exon
so has part: feature:1182384-1183095:-1:exon

XP_032940205.1
type: Protein
SIO_000068: ncbiprotein

position:1191441:-1
position: 1191441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1191321-1191441:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1189104-1189289:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1184972-1185761:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1182384-1183095:-1:exon

NLGN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: NLGN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroligin-2 isoform X2
translation: MLFLHGGSYMEGTGNMFDGSVLAAYGNVIVVTMNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWLHENVGHFGGDPQRITIFGSGAGAACVSLLILSHHSEGLFQKAIAQSGTAIASWSVNYQPLKYTRLLAAKVGCERADTGAAVECLRRQPFRALVDQDVQPARYHVAFGPVVDGDVVPDDPEILMQQGEFLNYDILIGVNQGEGLKFVEDSLESEDGISASYFDFTVSNFVDNLYGYPEGKDILRETIKFMYTDWADRDNGEMRRKTLLALFTDHQWVAPAVATAKLHAEYQSPVYFYTFYHHCQTDARPEWADAAHGDEIPYVFGVPMVGATDLFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVVWTRFDGKDKRYLHIGLKPRVRDHYRANKVAFWLELVPHLHNLHQLPHASTTTRLPPPPGPPRRAPATRRPPPSSAPPGRDDRRDDRDDDDDDEDEDGGRGGRRRFAPFPGDSRDYSTELSVTVAVGASLLFLNILAFAALYYKRDKRPPPDPRGVVGGVGAVSIPPRRLTPPPERPRRGRSGAQRPAGPRRGGAGAAADEAPQAGRGRGGGG
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: complement(join(1182384..1183095,1184972..1185761,1189104..1189289,1191321..1191441))
location: region:1182384-1191441:-1
so has part: feature:1191321-1191441:-1:exon
so has part: feature:1189104-1189289:-1:exon
so has part: feature:1184972-1185761:-1:exon
so has part: feature:1182384-1183095:-1:exon

XP_032940206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1191321-1191441:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1189104-1189289:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1184972-1185761:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1182384-1183095:-1:exon

NLGN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: NLGN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroligin-2 isoform X2
translation: MLFLHGGSYMEGTGNMFDGSVLAAYGNVIVVTMNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWLHENVGHFGGDPQRITIFGSGAGAACVSLLILSHHSEGLFQKAIAQSGTAIASWSVNYQPLKYTRLLAAKVGCERADTGAAVECLRRQPFRALVDQDVQPARYHVAFGPVVDGDVVPDDPEILMQQGEFLNYDILIGVNQGEGLKFVEDSLESEDGISASYFDFTVSNFVDNLYGYPEGKDILRETIKFMYTDWADRDNGEMRRKTLLALFTDHQWVAPAVATAKLHAEYQSPVYFYTFYHHCQTDARPEWADAAHGDEIPYVFGVPMVGATDLFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVVWTRFDGKDKRYLHIGLKPRVRDHYRANKVAFWLELVPHLHNLHQLPHASTTTRLPPPPGPPRRAPATRRPPPSSAPPGRDDRRDDRDDDDDDEDEDGGRGGRRRFAPFPGDSRDYSTELSVTVAVGASLLFLNILAFAALYYKRDKRPPPDPRGVVGGVGAVSIPPRRLTPPPERPRRGRSGAQRPAGPRRGGAGAAADEAPQAGRGRGGGG
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: complement(join(1182384..1183095,1184972..1185761,1189104..1189289,1191321..1191441))
location: region:1182384-1191441:-1
so has part: feature:1191321-1191441:-1:exon
so has part: feature:1189104-1189289:-1:exon
so has part: feature:1184972-1185761:-1:exon
so has part: feature:1182384-1183095:-1:exon

XP_032940208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1191321-1191441:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1189104-1189289:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1184972-1185761:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1182384-1183095:-1:exon

NLGN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: NLGN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroligin-2 isoform X2
translation: MLFLHGGSYMEGTGNMFDGSVLAAYGNVIVVTMNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWLHENVGHFGGDPQRITIFGSGAGAACVSLLILSHHSEGLFQKAIAQSGTAIASWSVNYQPLKYTRLLAAKVGCERADTGAAVECLRRQPFRALVDQDVQPARYHVAFGPVVDGDVVPDDPEILMQQGEFLNYDILIGVNQGEGLKFVEDSLESEDGISASYFDFTVSNFVDNLYGYPEGKDILRETIKFMYTDWADRDNGEMRRKTLLALFTDHQWVAPAVATAKLHAEYQSPVYFYTFYHHCQTDARPEWADAAHGDEIPYVFGVPMVGATDLFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVVWTRFDGKDKRYLHIGLKPRVRDHYRANKVAFWLELVPHLHNLHQLPHASTTTRLPPPPGPPRRAPATRRPPPSSAPPGRDDRRDDRDDDDDDEDEDGGRGGRRRFAPFPGDSRDYSTELSVTVAVGASLLFLNILAFAALYYKRDKRPPPDPRGVVGGVGAVSIPPRRLTPPPERPRRGRSGAQRPAGPRRGGAGAAADEAPQAGRGRGGGG
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: complement(join(1182384..1183095,1184972..1185761,1189104..1189289,1191321..1191441))
location: region:1182384-1191441:-1
so has part: feature:1191321-1191441:-1:exon
so has part: feature:1189104-1189289:-1:exon
so has part: feature:1184972-1185761:-1:exon
so has part: feature:1182384-1183095:-1:exon

XP_032940209.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1191321-1191441:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1189104-1189289:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1184972-1185761:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1182384-1183095:-1:exon

NLGN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: NLGN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroligin-2 isoform X2
translation: MLFLHGGSYMEGTGNMFDGSVLAAYGNVIVVTMNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWLHENVGHFGGDPQRITIFGSGAGAACVSLLILSHHSEGLFQKAIAQSGTAIASWSVNYQPLKYTRLLAAKVGCERADTGAAVECLRRQPFRALVDQDVQPARYHVAFGPVVDGDVVPDDPEILMQQGEFLNYDILIGVNQGEGLKFVEDSLESEDGISASYFDFTVSNFVDNLYGYPEGKDILRETIKFMYTDWADRDNGEMRRKTLLALFTDHQWVAPAVATAKLHAEYQSPVYFYTFYHHCQTDARPEWADAAHGDEIPYVFGVPMVGATDLFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVVWTRFDGKDKRYLHIGLKPRVRDHYRANKVAFWLELVPHLHNLHQLPHASTTTRLPPPPGPPRRAPATRRPPPSSAPPGRDDRRDDRDDDDDDEDEDGGRGGRRRFAPFPGDSRDYSTELSVTVAVGASLLFLNILAFAALYYKRDKRPPPDPRGVVGGVGAVSIPPRRLTPPPERPRRGRSGAQRPAGPRRGGAGAAADEAPQAGRGRGGGG
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: complement(join(1182384..1183095,1184972..1185761,1189104..1189289,1191321..1191441))
location: region:1182384-1191441:-1
so has part: feature:1191321-1191441:-1:exon
so has part: feature:1189104-1189289:-1:exon
so has part: feature:1184972-1185761:-1:exon
so has part: feature:1182384-1183095:-1:exon

XP_032940210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1191321-1191441:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1189104-1189289:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1184972-1185761:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1182384-1183095:-1:exon

NLGN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: NLGN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroligin-2 isoform X2
translation: MLFLHGGSYMEGTGNMFDGSVLAAYGNVIVVTMNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWLHENVGHFGGDPQRITIFGSGAGAACVSLLILSHHSEGLFQKAIAQSGTAIASWSVNYQPLKYTRLLAAKVGCERADTGAAVECLRRQPFRALVDQDVQPARYHVAFGPVVDGDVVPDDPEILMQQGEFLNYDILIGVNQGEGLKFVEDSLESEDGISASYFDFTVSNFVDNLYGYPEGKDILRETIKFMYTDWADRDNGEMRRKTLLALFTDHQWVAPAVATAKLHAEYQSPVYFYTFYHHCQTDARPEWADAAHGDEIPYVFGVPMVGATDLFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVVWTRFDGKDKRYLHIGLKPRVRDHYRANKVAFWLELVPHLHNLHQLPHASTTTRLPPPPGPPRRAPATRRPPPSSAPPGRDDRRDDRDDDDDDEDEDGGRGGRRRFAPFPGDSRDYSTELSVTVAVGASLLFLNILAFAALYYKRDKRPPPDPRGVVGGVGAVSIPPRRLTPPPERPRRGRSGAQRPAGPRRGGAGAAADEAPQAGRGRGGGG
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: complement(join(1182384..1183095,1184972..1185761,1189104..1189289,1191321..1191441))
location: region:1182384-1191441:-1
so has part: feature:1191321-1191441:-1:exon
so has part: feature:1189104-1189289:-1:exon
so has part: feature:1184972-1185761:-1:exon
so has part: feature:1182384-1183095:-1:exon

XP_032940211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1191321-1191441:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1189104-1189289:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1184972-1185761:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1182384-1183095:-1:exon

NLGN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: NLGN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroligin-2 isoform X2
translation: MLFLHGGSYMEGTGNMFDGSVLAAYGNVIVVTMNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWLHENVGHFGGDPQRITIFGSGAGAACVSLLILSHHSEGLFQKAIAQSGTAIASWSVNYQPLKYTRLLAAKVGCERADTGAAVECLRRQPFRALVDQDVQPARYHVAFGPVVDGDVVPDDPEILMQQGEFLNYDILIGVNQGEGLKFVEDSLESEDGISASYFDFTVSNFVDNLYGYPEGKDILRETIKFMYTDWADRDNGEMRRKTLLALFTDHQWVAPAVATAKLHAEYQSPVYFYTFYHHCQTDARPEWADAAHGDEIPYVFGVPMVGATDLFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVVWTRFDGKDKRYLHIGLKPRVRDHYRANKVAFWLELVPHLHNLHQLPHASTTTRLPPPPGPPRRAPATRRPPPSSAPPGRDDRRDDRDDDDDDEDEDGGRGGRRRFAPFPGDSRDYSTELSVTVAVGASLLFLNILAFAALYYKRDKRPPPDPRGVVGGVGAVSIPPRRLTPPPERPRRGRSGAQRPAGPRRGGAGAAADEAPQAGRGRGGGG
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: complement(join(1182384..1183095,1184972..1185761,1189104..1189289,1191321..1191441))
location: region:1182384-1191441:-1
so has part: feature:1191321-1191441:-1:exon
so has part: feature:1189104-1189289:-1:exon
so has part: feature:1184972-1185761:-1:exon
so has part: feature:1182384-1183095:-1:exon

XP_032940213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1191321-1191441:-1:exon