Catharus ustulatus isolate bCatUst1 chromosome 33, bCatUst1.pri.v2, whole genome shotgun sequence.
type: Entry
definition: Catharus ustulatus isolate bCatUst1 chromosome 33, bCatUst1.pri.v2, whole genome shotgun sequence.
sequence version: NC_046253.1
sequence date: 2021-07-28
sequence: sequence
division: CON
label: NC_046253.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA613294
dblink: SAMN12618602
keyword: WGS
keyword: RefSeq
source: Catharus ustulatus (Swainson's thrush)
organism: Catharus ustulatus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Turdidae; Catharus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020368.1.\nAssembly name: bCatUst1.pri.v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/12/22. The original whole-genome shotgun project has the\naccession WNMQ00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 06-AUG-2020\nAssembly Method :: FALCON v. DX 1.9.0; FALCON-Unzip v.\n 6.0.0.47841; purge_dups github v.\n purge_haplotig (bitbucket v1.0.3+\n 1.Nov.2018); Scaff10x v. 2; Bionano Solve\n v. 3.2.1_04122018; Salsa2 HiC v. 2.2;\n Arrow polishing and gap filling v.\n Smrtlink_6.0.0.47841; Longranger Align v.\n 2.2.2; freebayes v. 1.3.1; gEVAL manual\n curation v. 2020-08-06; VGP assembly\n pipeline v. 1.5\nAssembly Name :: bCatUst1.pri.v2\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 60.58x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Catharus ustulatus Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 2284362
topology: linear
so has quality: SO_0000987
location: 1..2284362
location: region:1-2284362:1
RO_0002162: 91951

NC_046253
type: RefSeq
SIO_000068: refseq

PRJNA613294
type: BioProject
SIO_000068: bioproject

SAMN12618602
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2284362:1
position: 2284362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-2284362:1:source
so part of: sequence
organism: Catharus ustulatus
mol type: genomic DNA
isolate: bCatUst1
chromosome: 33
sex: female
tissue type: blood
dev stage: adult
country: Canada: Kamloops
lat lon: 50.67613 N 120.33787 W
collection date: 15-Jul-2018
collected by: Kira Delmore

91951
type: Taxonomy
SIO_000068: taxonomy

LOC117009422
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009422
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2103..4891)
location: region:2103-4891:-1
so has part: feature:2103-4891:-1:exon
subclass of: SO_0000010

117009422
type: Gene
SIO_000068: ncbigene

position:2103:-1
position: 2103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4891:-1
position: 4891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2103-4891:-1:exon

LOC117009422
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009422
product: uncharacterized LOC117009422
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_033083661.1
SIO_010081: LOC117009422
subclass of: SO_0000673
so part of: LOC117009422
location: complement(join(2103..2151,2497..4891))
location: region:2103-4891:-1
so has part: feature:2497-4891:-1:exon
so has part: feature:2103-2151:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2497-4891:-1:exon

position:2497:-1
position: 2497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2103-2151:-1:exon

position:2151:-1
position: 2151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009422
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009422
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117009422
translation: MSPSQRGLELLGNGGWDRTALPAAALALGILLGWVTAALSCSALQAWQENPGEAFRFHQLGLGVGRAQHNTRSVPGAAQSLSQHLGATSQARGCQGSVVQVLGSLPLPLALGGLGCTGGLAAEPQSLSDPSQCPQSSWHCRWVTPLTHLGSTAPRAAVPSWGAPRPHSRAQRGFCAWLDKPCSSCAAQLQPQPSLLVQEGPSSLGAGTRSGRRHGAEQLGGVKQHRGVPRARNAPCARDGTRARDIPCARQAPGVGADPWLRAVSSDTSPILGMGACSPGSHPRGICVRFGTAQALLTCPDPAHPWLPGGARGCSHTRGRFGAGAVLGGDTAGAVRKLQGDPVHGTQRVPVPTWPGRGRAEHPAGILWVMLRPG
SIO_010081: LOC117009422
subclass of: SO_0000673
so part of: LOC117009422
location: complement(2789..3913)
location: region:2789-3913:-1
so has part: feature:2789-3913:-1:exon

XP_032939552.1
type: Protein
SIO_000068: ncbiprotein

position:2789:-1
position: 2789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3913:-1
position: 3913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2789-3913:-1:exon

LOC117009423
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009423
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5609..8924)
location: region:5609-8924:-1
so has part: feature:5609-8924:-1:exon
subclass of: SO_0000011

117009423
type: Gene
SIO_000068: ncbigene

position:5609:-1
position: 5609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8924:-1
position: 8924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5609-8924:-1:exon

LOC117009423
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117009423
product: uncharacterized LOC117009423, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_004420483.2
SIO_010081: LOC117009423
subclass of: SO_0000673
so part of: LOC117009423
location: complement(join(5609..5714,6186..6302,7449..7525,7609..7776,7871..7912,8014..8924))
location: region:5609-8924:-1
so has part: feature:8014-8924:-1:exon
so has part: feature:7871-7912:-1:exon
so has part: feature:7609-7776:-1:exon
so has part: feature:7449-7525:-1:exon
so has part: feature:6186-6302:-1:exon
so has part: feature:5609-5714:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8014-8924:-1:exon

position:8014:-1
position: 8014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7871-7912:-1:exon

position:7871:-1
position: 7871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7912:-1
position: 7912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7609-7776:-1:exon

position:7609:-1
position: 7609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7776:-1
position: 7776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7449-7525:-1:exon

position:7449:-1
position: 7449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7525:-1
position: 7525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6186-6302:-1:exon

position:6186:-1
position: 6186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6302:-1
position: 6302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5609-5714:-1:exon

position:5714:-1
position: 5714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009423
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117009423
product: uncharacterized LOC117009423, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_004420484.2
SIO_010081: LOC117009423
subclass of: SO_0000673
so part of: LOC117009423
location: complement(join(5609..5714,5792..6302,7449..7525,7609..7776,7871..7912,8014..8924))
location: region:5609-8924:-1
so has part: feature:8014-8924:-1:exon
so has part: feature:7871-7912:-1:exon
so has part: feature:7609-7776:-1:exon
so has part: feature:7449-7525:-1:exon
so has part: feature:5792-6302:-1:exon
so has part: feature:5609-5714:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8014-8924:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7871-7912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7609-7776:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7449-7525:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5792-6302:-1:exon

position:5792:-1
position: 5792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5609-5714:-1:exon

LOC117009423
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117009423
product: uncharacterized LOC117009423, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XR_004420482.1
SIO_010081: LOC117009423
subclass of: SO_0000673
so part of: LOC117009423
location: complement(join(6309..7371,7449..7525,7609..7776,7871..7912,8014..8924))
location: region:6309-8924:-1
so has part: feature:8014-8924:-1:exon
so has part: feature:7871-7912:-1:exon
so has part: feature:7609-7776:-1:exon
so has part: feature:7449-7525:-1:exon
so has part: feature:6309-7371:-1:exon

position:6309:-1
position: 6309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8014-8924:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7871-7912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7609-7776:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7449-7525:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6309-7371:-1:exon

position:7371:-1
position: 7371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009425
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009425
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8931..14282)
location: region:8931-14282:-1
so has part: feature:8931-14282:-1:exon
subclass of: SO_0000011

117009425
type: Gene
SIO_000068: ncbigene

position:8931:-1
position: 8931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14282:-1
position: 14282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8931-14282:-1:exon

LOC117009425
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117009425
product: uncharacterized LOC117009425
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004420485.1
SIO_010081: LOC117009425
subclass of: SO_0000673
so part of: LOC117009425
location: complement(join(8931..9032,9103..9182,9266..9429,9528..9555,9657..10653,10731..10808,10917..11034,11378..11520,12749..13313,13500..13615,14195..14282))
location: region:8931-14282:-1
so has part: feature:14195-14282:-1:exon
so has part: feature:13500-13615:-1:exon
so has part: feature:12749-13313:-1:exon
so has part: feature:11378-11520:-1:exon
so has part: feature:10917-11034:-1:exon
so has part: feature:10731-10808:-1:exon
so has part: feature:9657-10653:-1:exon
so has part: feature:9528-9555:-1:exon
so has part: feature:9266-9429:-1:exon
so has part: feature:9103-9182:-1:exon
so has part: feature:8931-9032:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14195-14282:-1:exon

position:14195:-1
position: 14195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13500-13615:-1:exon

position:13500:-1
position: 13500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13615:-1
position: 13615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12749-13313:-1:exon

position:12749:-1
position: 12749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13313:-1
position: 13313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11378-11520:-1:exon

position:11378:-1
position: 11378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11520:-1
position: 11520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10917-11034:-1:exon

position:10917:-1
position: 10917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11034:-1
position: 11034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10731-10808:-1:exon

position:10731:-1
position: 10731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10808:-1
position: 10808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9657-10653:-1:exon

position:9657:-1
position: 9657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10653:-1
position: 10653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9528-9555:-1:exon

position:9528:-1
position: 9528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9555:-1
position: 9555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9266-9429:-1:exon

position:9266:-1
position: 9266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9429:-1
position: 9429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9103-9182:-1:exon

position:9103:-1
position: 9103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9182:-1
position: 9182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8931-9032:-1:exon

position:9032:-1
position: 9032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMARCA4
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: SMARCA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 15775..38556
location: region:15775-38556:1
so has part: feature:15775-38556:1:exon
subclass of: SO_0000010

117009421
type: Gene
SIO_000068: ncbigene

position:15775:1
position: 15775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38556:1
position: 38556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15775-38556:1:exon

SMARCA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SMARCA4
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083657.1
SIO_010081: SMARCA4
subclass of: SO_0000673
so part of: SMARCA4
location: join(15775..15915,17253..17305,18456..18683,19245..19377,19681..20055,20608..20706,21236..21476,21987..22113,22207..22380,22676..22849,23028..23195,23512..23562,23786..23916,24102..24159,24673..24791,25379..25529,25924..26087,26169..26235,26491..26601,27180..27422,27971..28084,28473..28580,28995..29081,29475..29521,29709..29875,31222..31385,32661..32888,33106..33192,34505..34582,35756..35974,36308..36558,36750..36858,36940..37041,37223..37355,37455..37594,37908..38556)
location: region:15775-38556:1
so has part: feature:15775-15915:1:exon
so has part: feature:17253-17305:1:exon
so has part: feature:18456-18683:1:exon
so has part: feature:19245-19377:1:exon
so has part: feature:19681-20055:1:exon
so has part: feature:20608-20706:1:exon
so has part: feature:21236-21476:1:exon
so has part: feature:21987-22113:1:exon
so has part: feature:22207-22380:1:exon
so has part: feature:22676-22849:1:exon
so has part: feature:23028-23195:1:exon
so has part: feature:23512-23562:1:exon
so has part: feature:23786-23916:1:exon
so has part: feature:24102-24159:1:exon
so has part: feature:24673-24791:1:exon
so has part: feature:25379-25529:1:exon
so has part: feature:25924-26087:1:exon
so has part: feature:26169-26235:1:exon
so has part: feature:26491-26601:1:exon
so has part: feature:27180-27422:1:exon
so has part: feature:27971-28084:1:exon
so has part: feature:28473-28580:1:exon
so has part: feature:28995-29081:1:exon
so has part: feature:29475-29521:1:exon
so has part: feature:29709-29875:1:exon
so has part: feature:31222-31385:1:exon
so has part: feature:32661-32888:1:exon
so has part: feature:33106-33192:1:exon
so has part: feature:34505-34582:1:exon
so has part: feature:35756-35974:1:exon
so has part: feature:36308-36558:1:exon
so has part: feature:36750-36858:1:exon
so has part: feature:36940-37041:1:exon
so has part: feature:37223-37355:1:exon
so has part: feature:37455-37594:1:exon
so has part: feature:37908-38556:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15775-15915:1:exon

position:15915:1
position: 15915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17253-17305:1:exon

position:17253:1
position: 17253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17305:1
position: 17305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:18456-18683:1:exon

position:18456:1
position: 18456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18683:1
position: 18683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:19245-19377:1:exon

position:19245:1
position: 19245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19377:1
position: 19377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:19681-20055:1:exon

position:19681:1
position: 19681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20055:1
position: 20055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:20608-20706:1:exon

position:20608:1
position: 20608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20706:1
position: 20706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:21236-21476:1:exon

position:21236:1
position: 21236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21476:1
position: 21476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:21987-22113:1:exon

position:21987:1
position: 21987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22113:1
position: 22113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:22207-22380:1:exon

position:22207:1
position: 22207
reference: sequence
type: ForwardStrandPosition
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position:22380:1
position: 22380
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 10
SIO_000628: feature:22676-22849:1:exon

position:22676:1
position: 22676
reference: sequence
type: ForwardStrandPosition
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position:22849:1
position: 22849
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 11
SIO_000628: feature:23028-23195:1:exon

position:23028:1
position: 23028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23195:1
position: 23195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:23512-23562:1:exon

position:23512:1
position: 23512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23562:1
position: 23562
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 13
SIO_000628: feature:23786-23916:1:exon

position:23786:1
position: 23786
reference: sequence
type: ForwardStrandPosition
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position:23916:1
position: 23916
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 14
SIO_000628: feature:24102-24159:1:exon

position:24102:1
position: 24102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24159:1
position: 24159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:24673-24791:1:exon

position:24673:1
position: 24673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24791:1
position: 24791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:25379-25529:1:exon

position:25379:1
position: 25379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25529:1
position: 25529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:25924-26087:1:exon

position:25924:1
position: 25924
reference: sequence
type: ForwardStrandPosition
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position:26087:1
position: 26087
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 18
SIO_000628: feature:26169-26235:1:exon

position:26169:1
position: 26169
reference: sequence
type: ForwardStrandPosition
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position:26235:1
position: 26235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:26491-26601:1:exon

position:26491:1
position: 26491
reference: sequence
type: ForwardStrandPosition
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position:26601:1
position: 26601
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 20
SIO_000628: feature:27180-27422:1:exon

position:27180:1
position: 27180
reference: sequence
type: ForwardStrandPosition
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position:27422:1
position: 27422
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 21
SIO_000628: feature:27971-28084:1:exon

position:27971:1
position: 27971
reference: sequence
type: ForwardStrandPosition
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position:28084:1
position: 28084
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 22
SIO_000628: feature:28473-28580:1:exon

position:28473:1
position: 28473
reference: sequence
type: ForwardStrandPosition
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position:28580:1
position: 28580
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 23
SIO_000628: feature:28995-29081:1:exon

position:28995:1
position: 28995
reference: sequence
type: ForwardStrandPosition
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position:29081:1
position: 29081
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 24
SIO_000628: feature:29475-29521:1:exon

position:29475:1
position: 29475
reference: sequence
type: ForwardStrandPosition
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position:29521:1
position: 29521
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 25
SIO_000628: feature:29709-29875:1:exon

position:29709:1
position: 29709
reference: sequence
type: ForwardStrandPosition
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position:29875:1
position: 29875
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 26
SIO_000628: feature:31222-31385:1:exon

position:31222:1
position: 31222
reference: sequence
type: ForwardStrandPosition
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position:31385:1
position: 31385
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 27
SIO_000628: feature:32661-32888:1:exon

position:32661:1
position: 32661
reference: sequence
type: ForwardStrandPosition
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position:32888:1
position: 32888
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 28
SIO_000628: feature:33106-33192:1:exon

position:33106:1
position: 33106
reference: sequence
type: ForwardStrandPosition
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position:33192:1
position: 33192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:34505-34582:1:exon

position:34505:1
position: 34505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34582:1
position: 34582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:35756-35974:1:exon

position:35756:1
position: 35756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35974:1
position: 35974
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 31
SIO_000628: feature:36308-36558:1:exon

position:36308:1
position: 36308
reference: sequence
type: ForwardStrandPosition
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position:36558:1
position: 36558
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 32
SIO_000628: feature:36750-36858:1:exon

position:36750:1
position: 36750
reference: sequence
type: ForwardStrandPosition
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position:36858:1
position: 36858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:36940-37041:1:exon

position:36940:1
position: 36940
reference: sequence
type: ForwardStrandPosition
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position:37041:1
position: 37041
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 34
SIO_000628: feature:37223-37355:1:exon

position:37223:1
position: 37223
reference: sequence
type: ForwardStrandPosition
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position:37355:1
position: 37355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:37455-37594:1:exon

position:37455:1
position: 37455
reference: sequence
type: ForwardStrandPosition
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position:37594:1
position: 37594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:37908-38556:1:exon

position:37908:1
position: 37908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SMARCA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SMARCA4
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083658.1
SIO_010081: SMARCA4
subclass of: SO_0000673
so part of: SMARCA4
location: join(15775..15915,17253..17305,18456..18683,19245..19377,19681..20055,20608..20706,21236..21476,21987..22113,22207..22380,22676..22849,23028..23195,23512..23562,23786..23916,24102..24159,24673..24791,25379..25529,25924..26087,26169..26235,26491..26601,27180..27422,27971..28084,28473..28580,28995..29081,29475..29521,29709..29875,31222..31385,32661..32888,33106..33192,34505..34582,35756..35974,36308..36558,36753..36858,36940..37041,37223..37355,37455..37594,37908..38556)
location: region:15775-38556:1
so has part: feature:15775-15915:1:exon
so has part: feature:17253-17305:1:exon
so has part: feature:18456-18683:1:exon
so has part: feature:19245-19377:1:exon
so has part: feature:19681-20055:1:exon
so has part: feature:20608-20706:1:exon
so has part: feature:21236-21476:1:exon
so has part: feature:21987-22113:1:exon
so has part: feature:22207-22380:1:exon
so has part: feature:22676-22849:1:exon
so has part: feature:23028-23195:1:exon
so has part: feature:23512-23562:1:exon
so has part: feature:23786-23916:1:exon
so has part: feature:24102-24159:1:exon
so has part: feature:24673-24791:1:exon
so has part: feature:25379-25529:1:exon
so has part: feature:25924-26087:1:exon
so has part: feature:26169-26235:1:exon
so has part: feature:26491-26601:1:exon
so has part: feature:27180-27422:1:exon
so has part: feature:27971-28084:1:exon
so has part: feature:28473-28580:1:exon
so has part: feature:28995-29081:1:exon
so has part: feature:29475-29521:1:exon
so has part: feature:29709-29875:1:exon
so has part: feature:31222-31385:1:exon
so has part: feature:32661-32888:1:exon
so has part: feature:33106-33192:1:exon
so has part: feature:34505-34582:1:exon
so has part: feature:35756-35974:1:exon
so has part: feature:36308-36558:1:exon
so has part: feature:36753-36858:1:exon
so has part: feature:36940-37041:1:exon
so has part: feature:37223-37355:1:exon
so has part: feature:37455-37594:1:exon
so has part: feature:37908-38556:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15775-15915:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17253-17305:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18456-18683:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:19245-19377:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:19681-20055:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:20608-20706:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:21236-21476:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:21987-22113:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:22207-22380:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:22676-22849:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:23028-23195:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:23512-23562:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:23786-23916:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:24102-24159:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:24673-24791:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:25379-25529:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:25924-26087:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26169-26235:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:26491-26601:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:27180-27422:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:27971-28084:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:28473-28580:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:28995-29081:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:29475-29521:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:29709-29875:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:31222-31385:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:32661-32888:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:33106-33192:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:34505-34582:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:35756-35974:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:36308-36558:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:36753-36858:1:exon

position:36753:1
position: 36753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:36940-37041:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:37223-37355:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:37455-37594:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:37908-38556:1:exon

SMARCA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SMARCA4
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083659.1
SIO_010081: SMARCA4
subclass of: SO_0000673
so part of: SMARCA4
location: join(15775..15915,17253..17305,18456..18683,19245..19377,19681..20055,20608..20706,21236..21476,21987..22113,22207..22380,22676..22849,23028..23195,23512..23562,23786..23916,24102..24159,24673..24791,25379..25529,25924..26087,26169..26235,26491..26601,27180..27422,27971..28084,28473..28580,28995..29081,29475..29521,29709..29875,31222..31385,32661..32888,34505..34582,35756..35974,36308..36558,36750..36858,36940..37041,37223..37355,37455..37594,37908..38556)
location: region:15775-38556:1
so has part: feature:15775-15915:1:exon
so has part: feature:17253-17305:1:exon
so has part: feature:18456-18683:1:exon
so has part: feature:19245-19377:1:exon
so has part: feature:19681-20055:1:exon
so has part: feature:20608-20706:1:exon
so has part: feature:21236-21476:1:exon
so has part: feature:21987-22113:1:exon
so has part: feature:22207-22380:1:exon
so has part: feature:22676-22849:1:exon
so has part: feature:23028-23195:1:exon
so has part: feature:23512-23562:1:exon
so has part: feature:23786-23916:1:exon
so has part: feature:24102-24159:1:exon
so has part: feature:24673-24791:1:exon
so has part: feature:25379-25529:1:exon
so has part: feature:25924-26087:1:exon
so has part: feature:26169-26235:1:exon
so has part: feature:26491-26601:1:exon
so has part: feature:27180-27422:1:exon
so has part: feature:27971-28084:1:exon
so has part: feature:28473-28580:1:exon
so has part: feature:28995-29081:1:exon
so has part: feature:29475-29521:1:exon
so has part: feature:29709-29875:1:exon
so has part: feature:31222-31385:1:exon
so has part: feature:32661-32888:1:exon
so has part: feature:34505-34582:1:exon
so has part: feature:35756-35974:1:exon
so has part: feature:36308-36558:1:exon
so has part: feature:36750-36858:1:exon
so has part: feature:36940-37041:1:exon
so has part: feature:37223-37355:1:exon
so has part: feature:37455-37594:1:exon
so has part: feature:37908-38556:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15775-15915:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17253-17305:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18456-18683:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:19245-19377:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:19681-20055:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:20608-20706:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:21236-21476:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:21987-22113:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:22207-22380:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:22676-22849:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:23028-23195:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:23512-23562:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:23786-23916:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:24102-24159:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:24673-24791:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:25379-25529:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:25924-26087:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26169-26235:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:26491-26601:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:27180-27422:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:27971-28084:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:28473-28580:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:28995-29081:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:29475-29521:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:29709-29875:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:31222-31385:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:32661-32888:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:34505-34582:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:35756-35974:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:36308-36558:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:36750-36858:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:36940-37041:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:37223-37355:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:37455-37594:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:37908-38556:1:exon

SMARCA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SMARCA4
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083660.1
SIO_010081: SMARCA4
subclass of: SO_0000673
so part of: SMARCA4
location: join(15775..15915,17253..17305,18456..18683,19245..19377,19681..20055,20608..20706,21236..21476,21987..22113,22207..22380,22676..22849,23028..23195,23512..23562,23786..23916,24102..24159,24673..24791,25379..25529,25924..26087,26169..26235,26491..26601,27180..27422,27971..28084,28473..28580,28995..29081,29475..29521,29709..29875,31222..31385,32661..32888,34505..34582,35756..35974,36308..36558,36753..36858,36940..37041,37223..37355,37455..37594,37908..38556)
location: region:15775-38556:1
so has part: feature:15775-15915:1:exon
so has part: feature:17253-17305:1:exon
so has part: feature:18456-18683:1:exon
so has part: feature:19245-19377:1:exon
so has part: feature:19681-20055:1:exon
so has part: feature:20608-20706:1:exon
so has part: feature:21236-21476:1:exon
so has part: feature:21987-22113:1:exon
so has part: feature:22207-22380:1:exon
so has part: feature:22676-22849:1:exon
so has part: feature:23028-23195:1:exon
so has part: feature:23512-23562:1:exon
so has part: feature:23786-23916:1:exon
so has part: feature:24102-24159:1:exon
so has part: feature:24673-24791:1:exon
so has part: feature:25379-25529:1:exon
so has part: feature:25924-26087:1:exon
so has part: feature:26169-26235:1:exon
so has part: feature:26491-26601:1:exon
so has part: feature:27180-27422:1:exon
so has part: feature:27971-28084:1:exon
so has part: feature:28473-28580:1:exon
so has part: feature:28995-29081:1:exon
so has part: feature:29475-29521:1:exon
so has part: feature:29709-29875:1:exon
so has part: feature:31222-31385:1:exon
so has part: feature:32661-32888:1:exon
so has part: feature:34505-34582:1:exon
so has part: feature:35756-35974:1:exon
so has part: feature:36308-36558:1:exon
so has part: feature:36753-36858:1:exon
so has part: feature:36940-37041:1:exon
so has part: feature:37223-37355:1:exon
so has part: feature:37455-37594:1:exon
so has part: feature:37908-38556:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15775-15915:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17253-17305:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18456-18683:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:19245-19377:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:19681-20055:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:20608-20706:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:21236-21476:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:21987-22113:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:22207-22380:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:22676-22849:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:23028-23195:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:23512-23562:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:23786-23916:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:24102-24159:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:24673-24791:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:25379-25529:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:25924-26087:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:26169-26235:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:26491-26601:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:27180-27422:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:27971-28084:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:28473-28580:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:28995-29081:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:29475-29521:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:29709-29875:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:31222-31385:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:32661-32888:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:34505-34582:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:35756-35974:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:36308-36558:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:36753-36858:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:36940-37041:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:37223-37355:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:37455-37594:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:37908-38556:1:exon

SMARCA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SMARCA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription activator BRG1 isoform X1
translation: MATPEPPLGGTPRPGPSPGPGPSPGSMLGPSPGPSPGSGHSGHSGHALPTPGYAPDTIHPLHKPLDPMHEKGMSEDPRYGQMKGMGMRPGGHAGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPSNGPSSGSAGGSGAALDGSGSDSPALGRGPSPFNAAQLHQLRAQIMAYKLLARGQPLPEHLQVAVQGKRPLPGMQPQIPALPPPAGAAQGPGQAPGAGPAPPGYSRPHGIGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPLSAAAPGGAPQKLLPPPPAGRPSPVPPAVPPASPGPPPPSPGQPAPPALPIHPKQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVSGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQAPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPALPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRQSAGSGSFPHAASSLCLGAESEEAPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWILKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKREPEGPAGPPPSARSRDKDEESRKQKKRGRPPAEKLSPNPPPLTRKMRKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKVEKEEESDGEESEEEEEGEEEGSESEARSVKVKIRLGRKEKVPERGKGRRRGGRGGRPKPLLSDDESEDEQEEDRSGSGTEDD
SIO_010081: SMARCA4
subclass of: SO_0000673
so part of: SMARCA4
location: join(18495..18683,19245..19377,19681..20055,20608..20706,21236..21476,21987..22113,22207..22380,22676..22849,23028..23195,23512..23562,23786..23916,24102..24159,24673..24791,25379..25529,25924..26087,26169..26235,26491..26601,27180..27422,27971..28084,28473..28580,28995..29081,29475..29521,29709..29875,31222..31385,32661..32888,33106..33192,34505..34582,35756..35974,36308..36558,36750..36858,36940..37041,37223..37355,37455..37594,37908..37940)
location: region:18495-37940:1
so has part: feature:18495-18683:1:exon
so has part: feature:19245-19377:1:exon
so has part: feature:19681-20055:1:exon
so has part: feature:20608-20706:1:exon
so has part: feature:21236-21476:1:exon
so has part: feature:21987-22113:1:exon
so has part: feature:22207-22380:1:exon
so has part: feature:22676-22849:1:exon
so has part: feature:23028-23195:1:exon
so has part: feature:23512-23562:1:exon
so has part: feature:23786-23916:1:exon
so has part: feature:24102-24159:1:exon
so has part: feature:24673-24791:1:exon
so has part: feature:25379-25529:1:exon
so has part: feature:25924-26087:1:exon
so has part: feature:26169-26235:1:exon
so has part: feature:26491-26601:1:exon
so has part: feature:27180-27422:1:exon
so has part: feature:27971-28084:1:exon
so has part: feature:28473-28580:1:exon
so has part: feature:28995-29081:1:exon
so has part: feature:29475-29521:1:exon
so has part: feature:29709-29875:1:exon
so has part: feature:31222-31385:1:exon
so has part: feature:32661-32888:1:exon
so has part: feature:33106-33192:1:exon
so has part: feature:34505-34582:1:exon
so has part: feature:35756-35974:1:exon
so has part: feature:36308-36558:1:exon
so has part: feature:36750-36858:1:exon
so has part: feature:36940-37041:1:exon
so has part: feature:37223-37355:1:exon
so has part: feature:37455-37594:1:exon
so has part: feature:37908-37940:1:exon

XP_032939548.1
type: Protein
SIO_000068: ncbiprotein

position:18495:1
position: 18495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37940:1
position: 37940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18495-18683:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19245-19377:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:19681-20055:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:20608-20706:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:21236-21476:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:21987-22113:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22207-22380:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:22676-22849:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:23028-23195:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:23512-23562:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:23786-23916:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:24102-24159:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:24673-24791:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:25379-25529:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:25924-26087:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:26169-26235:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:26491-26601:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:27180-27422:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:27971-28084:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:28473-28580:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:28995-29081:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:29475-29521:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:29709-29875:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:31222-31385:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:32661-32888:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:33106-33192:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:34505-34582:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:35756-35974:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:36308-36558:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:36750-36858:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:36940-37041:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:37223-37355:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:37455-37594:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:37908-37940:1:exon

SMARCA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SMARCA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription activator BRG1 isoform X2
translation: MATPEPPLGGTPRPGPSPGPGPSPGSMLGPSPGPSPGSGHSGHSGHALPTPGYAPDTIHPLHKPLDPMHEKGMSEDPRYGQMKGMGMRPGGHAGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPSNGPSSGSAGGSGAALDGSGSDSPALGRGPSPFNAAQLHQLRAQIMAYKLLARGQPLPEHLQVAVQGKRPLPGMQPQIPALPPPAGAAQGPGQAPGAGPAPPGYSRPHGIGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPLSAAAPGGAPQKLLPPPPAGRPSPVPPAVPPASPGPPPPSPGQPAPPALPIHPKQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVSGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQAPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPALPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRQSAGSGSFPHAASSLCLGAESEEAPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWILKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKREPEGPAGPPPSARSRDKDEESRKQKKRGRPPAEKLSPNPPPLTRKMRKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKVEKEEESDGEESEEEEEGEEEGSESEARSVKVKIRLGRKEKVPERGKGRRRGGRGGRPKPLLSDDESEDEQEEDRSGSGTEDD
SIO_010081: SMARCA4
subclass of: SO_0000673
so part of: SMARCA4
location: join(18495..18683,19245..19377,19681..20055,20608..20706,21236..21476,21987..22113,22207..22380,22676..22849,23028..23195,23512..23562,23786..23916,24102..24159,24673..24791,25379..25529,25924..26087,26169..26235,26491..26601,27180..27422,27971..28084,28473..28580,28995..29081,29475..29521,29709..29875,31222..31385,32661..32888,33106..33192,34505..34582,35756..35974,36308..36558,36753..36858,36940..37041,37223..37355,37455..37594,37908..37940)
location: region:18495-37940:1
so has part: feature:18495-18683:1:exon
so has part: feature:19245-19377:1:exon
so has part: feature:19681-20055:1:exon
so has part: feature:20608-20706:1:exon
so has part: feature:21236-21476:1:exon
so has part: feature:21987-22113:1:exon
so has part: feature:22207-22380:1:exon
so has part: feature:22676-22849:1:exon
so has part: feature:23028-23195:1:exon
so has part: feature:23512-23562:1:exon
so has part: feature:23786-23916:1:exon
so has part: feature:24102-24159:1:exon
so has part: feature:24673-24791:1:exon
so has part: feature:25379-25529:1:exon
so has part: feature:25924-26087:1:exon
so has part: feature:26169-26235:1:exon
so has part: feature:26491-26601:1:exon
so has part: feature:27180-27422:1:exon
so has part: feature:27971-28084:1:exon
so has part: feature:28473-28580:1:exon
so has part: feature:28995-29081:1:exon
so has part: feature:29475-29521:1:exon
so has part: feature:29709-29875:1:exon
so has part: feature:31222-31385:1:exon
so has part: feature:32661-32888:1:exon
so has part: feature:33106-33192:1:exon
so has part: feature:34505-34582:1:exon
so has part: feature:35756-35974:1:exon
so has part: feature:36308-36558:1:exon
so has part: feature:36753-36858:1:exon
so has part: feature:36940-37041:1:exon
so has part: feature:37223-37355:1:exon
so has part: feature:37455-37594:1:exon
so has part: feature:37908-37940:1:exon

XP_032939549.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18495-18683:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19245-19377:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:19681-20055:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:20608-20706:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:21236-21476:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:21987-22113:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22207-22380:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:22676-22849:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:23028-23195:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:23512-23562:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:23786-23916:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:24102-24159:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:24673-24791:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:25379-25529:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:25924-26087:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:26169-26235:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:26491-26601:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:27180-27422:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:27971-28084:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:28473-28580:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:28995-29081:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:29475-29521:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:29709-29875:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:31222-31385:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:32661-32888:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:33106-33192:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:34505-34582:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:35756-35974:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:36308-36558:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:36753-36858:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:36940-37041:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:37223-37355:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:37455-37594:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:37908-37940:1:exon

SMARCA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SMARCA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription activator BRG1 isoform X3
translation: MATPEPPLGGTPRPGPSPGPGPSPGSMLGPSPGPSPGSGHSGHSGHALPTPGYAPDTIHPLHKPLDPMHEKGMSEDPRYGQMKGMGMRPGGHAGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPSNGPSSGSAGGSGAALDGSGSDSPALGRGPSPFNAAQLHQLRAQIMAYKLLARGQPLPEHLQVAVQGKRPLPGMQPQIPALPPPAGAAQGPGQAPGAGPAPPGYSRPHGIGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPLSAAAPGGAPQKLLPPPPAGRPSPVPPAVPPASPGPPPPSPGQPAPPALPIHPKQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVSGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQAPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPALPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWILKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKREPEGPAGPPPSARSRDKDEESRKQKKRGRPPAEKLSPNPPPLTRKMRKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKVEKEEESDGEESEEEEEGEEEGSESEARSVKVKIRLGRKEKVPERGKGRRRGGRGGRPKPLLSDDESEDEQEEDRSGSGTEDD
SIO_010081: SMARCA4
subclass of: SO_0000673
so part of: SMARCA4
location: join(18495..18683,19245..19377,19681..20055,20608..20706,21236..21476,21987..22113,22207..22380,22676..22849,23028..23195,23512..23562,23786..23916,24102..24159,24673..24791,25379..25529,25924..26087,26169..26235,26491..26601,27180..27422,27971..28084,28473..28580,28995..29081,29475..29521,29709..29875,31222..31385,32661..32888,34505..34582,35756..35974,36308..36558,36750..36858,36940..37041,37223..37355,37455..37594,37908..37940)
location: region:18495-37940:1
so has part: feature:18495-18683:1:exon
so has part: feature:19245-19377:1:exon
so has part: feature:19681-20055:1:exon
so has part: feature:20608-20706:1:exon
so has part: feature:21236-21476:1:exon
so has part: feature:21987-22113:1:exon
so has part: feature:22207-22380:1:exon
so has part: feature:22676-22849:1:exon
so has part: feature:23028-23195:1:exon
so has part: feature:23512-23562:1:exon
so has part: feature:23786-23916:1:exon
so has part: feature:24102-24159:1:exon
so has part: feature:24673-24791:1:exon
so has part: feature:25379-25529:1:exon
so has part: feature:25924-26087:1:exon
so has part: feature:26169-26235:1:exon
so has part: feature:26491-26601:1:exon
so has part: feature:27180-27422:1:exon
so has part: feature:27971-28084:1:exon
so has part: feature:28473-28580:1:exon
so has part: feature:28995-29081:1:exon
so has part: feature:29475-29521:1:exon
so has part: feature:29709-29875:1:exon
so has part: feature:31222-31385:1:exon
so has part: feature:32661-32888:1:exon
so has part: feature:34505-34582:1:exon
so has part: feature:35756-35974:1:exon
so has part: feature:36308-36558:1:exon
so has part: feature:36750-36858:1:exon
so has part: feature:36940-37041:1:exon
so has part: feature:37223-37355:1:exon
so has part: feature:37455-37594:1:exon
so has part: feature:37908-37940:1:exon

XP_032939550.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18495-18683:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19245-19377:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:19681-20055:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:20608-20706:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:21236-21476:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:21987-22113:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22207-22380:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:22676-22849:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:23028-23195:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:23512-23562:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:23786-23916:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:24102-24159:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:24673-24791:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:25379-25529:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:25924-26087:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:26169-26235:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:26491-26601:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:27180-27422:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:27971-28084:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:28473-28580:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:28995-29081:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:29475-29521:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:29709-29875:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:31222-31385:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:32661-32888:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:34505-34582:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:35756-35974:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:36308-36558:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:36750-36858:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:36940-37041:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:37223-37355:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:37455-37594:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:37908-37940:1:exon

SMARCA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SMARCA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription activator BRG1 isoform X4
translation: MATPEPPLGGTPRPGPSPGPGPSPGSMLGPSPGPSPGSGHSGHSGHALPTPGYAPDTIHPLHKPLDPMHEKGMSEDPRYGQMKGMGMRPGGHAGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPSNGPSSGSAGGSGAALDGSGSDSPALGRGPSPFNAAQLHQLRAQIMAYKLLARGQPLPEHLQVAVQGKRPLPGMQPQIPALPPPAGAAQGPGQAPGAGPAPPGYSRPHGIGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPLSAAAPGGAPQKLLPPPPAGRPSPVPPAVPPASPGPPPPSPGQPAPPALPIHPKQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVSGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQAPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPALPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWILKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKREPEGPAGPPPSARSRDKDEESRKQKKRGRPPAEKLSPNPPPLTRKMRKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKVEKEEESDGEESEEEEEGEEEGSESEARSVKVKIRLGRKEKVPERGKGRRRGGRGGRPKPLLSDDESEDEQEEDRSGSGTEDD
SIO_010081: SMARCA4
subclass of: SO_0000673
so part of: SMARCA4
location: join(18495..18683,19245..19377,19681..20055,20608..20706,21236..21476,21987..22113,22207..22380,22676..22849,23028..23195,23512..23562,23786..23916,24102..24159,24673..24791,25379..25529,25924..26087,26169..26235,26491..26601,27180..27422,27971..28084,28473..28580,28995..29081,29475..29521,29709..29875,31222..31385,32661..32888,34505..34582,35756..35974,36308..36558,36753..36858,36940..37041,37223..37355,37455..37594,37908..37940)
location: region:18495-37940:1
so has part: feature:18495-18683:1:exon
so has part: feature:19245-19377:1:exon
so has part: feature:19681-20055:1:exon
so has part: feature:20608-20706:1:exon
so has part: feature:21236-21476:1:exon
so has part: feature:21987-22113:1:exon
so has part: feature:22207-22380:1:exon
so has part: feature:22676-22849:1:exon
so has part: feature:23028-23195:1:exon
so has part: feature:23512-23562:1:exon
so has part: feature:23786-23916:1:exon
so has part: feature:24102-24159:1:exon
so has part: feature:24673-24791:1:exon
so has part: feature:25379-25529:1:exon
so has part: feature:25924-26087:1:exon
so has part: feature:26169-26235:1:exon
so has part: feature:26491-26601:1:exon
so has part: feature:27180-27422:1:exon
so has part: feature:27971-28084:1:exon
so has part: feature:28473-28580:1:exon
so has part: feature:28995-29081:1:exon
so has part: feature:29475-29521:1:exon
so has part: feature:29709-29875:1:exon
so has part: feature:31222-31385:1:exon
so has part: feature:32661-32888:1:exon
so has part: feature:34505-34582:1:exon
so has part: feature:35756-35974:1:exon
so has part: feature:36308-36558:1:exon
so has part: feature:36753-36858:1:exon
so has part: feature:36940-37041:1:exon
so has part: feature:37223-37355:1:exon
so has part: feature:37455-37594:1:exon
so has part: feature:37908-37940:1:exon

XP_032939551.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18495-18683:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19245-19377:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:19681-20055:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:20608-20706:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:21236-21476:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:21987-22113:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22207-22380:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:22676-22849:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:23028-23195:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:23512-23562:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:23786-23916:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:24102-24159:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:24673-24791:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:25379-25529:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:25924-26087:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:26169-26235:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:26491-26601:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:27180-27422:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:27971-28084:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:28473-28580:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:28995-29081:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:29475-29521:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:29709-29875:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:31222-31385:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:32661-32888:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:34505-34582:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:35756-35974:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:36308-36558:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:36753-36858:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:36940-37041:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:37223-37355:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:37455-37594:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:37908-37940:1:exon

LOC117009589
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009589
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 39196..46578
location: region:39196-46578:1
so has part: feature:39196-46578:1:exon
subclass of: SO_0000010

117009589
type: Gene
SIO_000068: ncbigene

position:39196:1
position: 39196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46578:1
position: 46578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39196-46578:1:exon

LOC117009589
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009589
product: low-density lipoprotein receptor-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083851.1
SIO_010081: LOC117009589
subclass of: SO_0000673
so part of: LOC117009589
location: join(39196..39744,40884..41258,41382..41507,41858..41980,42319..42441,42800..42965,43117..43335,43997..44115,44201..44340,44497..44641,44725..44868,45031..45255,45715..45860,46000..46578)
location: region:39196-46578:1
so has part: feature:39196-39744:1:exon
so has part: feature:40884-41258:1:exon
so has part: feature:41382-41507:1:exon
so has part: feature:41858-41980:1:exon
so has part: feature:42319-42441:1:exon
so has part: feature:42800-42965:1:exon
so has part: feature:43117-43335:1:exon
so has part: feature:43997-44115:1:exon
so has part: feature:44201-44340:1:exon
so has part: feature:44497-44641:1:exon
so has part: feature:44725-44868:1:exon
so has part: feature:45031-45255:1:exon
so has part: feature:45715-45860:1:exon
so has part: feature:46000-46578:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39196-39744:1:exon

position:39744:1
position: 39744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:40884-41258:1:exon

position:40884:1
position: 40884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41258:1
position: 41258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:41382-41507:1:exon

position:41382:1
position: 41382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41507:1
position: 41507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:41858-41980:1:exon

position:41858:1
position: 41858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41980:1
position: 41980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:42319-42441:1:exon

position:42319:1
position: 42319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42441:1
position: 42441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:42800-42965:1:exon

position:42800:1
position: 42800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42965:1
position: 42965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:43117-43335:1:exon

position:43117:1
position: 43117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43335:1
position: 43335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:43997-44115:1:exon

position:43997:1
position: 43997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44115:1
position: 44115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:44201-44340:1:exon

position:44201:1
position: 44201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44340:1
position: 44340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:44497-44641:1:exon

position:44497:1
position: 44497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44641:1
position: 44641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:44725-44868:1:exon

position:44725:1
position: 44725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44868:1
position: 44868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:45031-45255:1:exon

position:45031:1
position: 45031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45255:1
position: 45255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:45715-45860:1:exon

position:45715:1
position: 45715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45860:1
position: 45860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:46000-46578:1:exon

position:46000:1
position: 46000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117009589
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009589
product: low-density lipoprotein receptor-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083852.1
SIO_010081: LOC117009589
subclass of: SO_0000673
so part of: LOC117009589
location: join(39196..39744,40884..41258,41382..41507,41858..41980,42319..42441,42800..42965,43117..43335,43997..44115,44201..44340,44497..44641,44725..44868,45031..45093,45181..45255,45715..45860,46000..46578)
location: region:39196-46578:1
so has part: feature:39196-39744:1:exon
so has part: feature:40884-41258:1:exon
so has part: feature:41382-41507:1:exon
so has part: feature:41858-41980:1:exon
so has part: feature:42319-42441:1:exon
so has part: feature:42800-42965:1:exon
so has part: feature:43117-43335:1:exon
so has part: feature:43997-44115:1:exon
so has part: feature:44201-44340:1:exon
so has part: feature:44497-44641:1:exon
so has part: feature:44725-44868:1:exon
so has part: feature:45031-45093:1:exon
so has part: feature:45181-45255:1:exon
so has part: feature:45715-45860:1:exon
so has part: feature:46000-46578:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39196-39744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:40884-41258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:41382-41507:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:41858-41980:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:42319-42441:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:42800-42965:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43117-43335:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43997-44115:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:44201-44340:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:44497-44641:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:44725-44868:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:45031-45093:1:exon

position:45093:1
position: 45093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:45181-45255:1:exon

position:45181:1
position: 45181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:45715-45860:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:46000-46578:1:exon

LOC117009589
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009589
product: low-density lipoprotein receptor-like, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083853.1
SIO_010081: LOC117009589
subclass of: SO_0000673
so part of: LOC117009589
location: join(39196..39744,40884..41258,41382..41507,41858..41980,42319..42441,42800..42965,43117..43335,43997..44115,44201..44340,44497..44641,44725..44868,45181..45255,45715..45860,46000..46578)
location: region:39196-46578:1
so has part: feature:39196-39744:1:exon
so has part: feature:40884-41258:1:exon
so has part: feature:41382-41507:1:exon
so has part: feature:41858-41980:1:exon
so has part: feature:42319-42441:1:exon
so has part: feature:42800-42965:1:exon
so has part: feature:43117-43335:1:exon
so has part: feature:43997-44115:1:exon
so has part: feature:44201-44340:1:exon
so has part: feature:44497-44641:1:exon
so has part: feature:44725-44868:1:exon
so has part: feature:45181-45255:1:exon
so has part: feature:45715-45860:1:exon
so has part: feature:46000-46578:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39196-39744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:40884-41258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:41382-41507:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:41858-41980:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:42319-42441:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:42800-42965:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43117-43335:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43997-44115:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:44201-44340:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:44497-44641:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:44725-44868:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:45181-45255:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:45715-45860:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:46000-46578:1:exon

LOC117009589
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009589
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: low-density lipoprotein receptor-like isoform X1
translation: MGPGSTGIRAGTAGSGSGTTGRRPGSTGTSSGNTGILLLLLGAATVTATPTTAPSPCASDQLRCGDGSCLSRSFACDGDRDCPDGEDELGCPSPPPSWPCDPSFFTCRDGSCIAWLWRCDGDPDCRDGNDEENCGTPPPPRPCPSLQFPCGSGECVHRRWRCDGTPDCRDGSDEEGCGTAPPCPSGQLRCRDGRCIPGARACDGTPDCRDGDDEEECPDAPSCSPPHRFRCRSGECIATAQVCDGQRHCRDWSDEPLKECGVNECLAGNGGCSHGCRDLRVGFECLCPPGFSLNPDNRTCHSPPGTLLVSTRHEVLALGGPEPQTLQRSLKHVAALDIGVEEGSLFWGDPSEGLIYRAPLAPGPAVPLGVVPGPGSPAGIALDWIHRLLYWTEPGSGRVAVSDRSGTRHRTLHRDPDARPWGVVVDPLNGYLYWSDWGSRPHIAQGAQDGAPPKLLVTEDMERPQGLALDQSSQRLYWTDGRLHTVSSVALDGSGRRTHLRDPQHLAQPFGLAVFQDWAFWTDPHQGSLVAARLQGGSPTPQVVAQELFSPEAVVVLHPGRQPAGPNLCEGPGGLCSFLCLPSPARGPGSPRFRCACPDGEHLDTDGHTCVTEPPGTPELLPRNFSREGNASRGNGAAPDHAHRPHPSTTPTGHTLTTPVPTGALGQTGGPGGARPGVTALGVLLPLGLVLCLGVAARALWQGWHRRNTKSISFTNATFRKGPADPLDGGGLGDPLRPLTSEDDEP
SIO_010081: LOC117009589
subclass of: SO_0000673
so part of: LOC117009589
location: join(39588..39744,40884..41258,41382..41507,41858..41980,42319..42441,42800..42965,43117..43335,43997..44115,44201..44340,44497..44641,44725..44868,45031..45255,45715..45860,46000..46032)
location: region:39588-46032:1
so has part: feature:39588-39744:1:exon
so has part: feature:40884-41258:1:exon
so has part: feature:41382-41507:1:exon
so has part: feature:41858-41980:1:exon
so has part: feature:42319-42441:1:exon
so has part: feature:42800-42965:1:exon
so has part: feature:43117-43335:1:exon
so has part: feature:43997-44115:1:exon
so has part: feature:44201-44340:1:exon
so has part: feature:44497-44641:1:exon
so has part: feature:44725-44868:1:exon
so has part: feature:45031-45255:1:exon
so has part: feature:45715-45860:1:exon
so has part: feature:46000-46032:1:exon

XP_032939742.1
type: Protein
SIO_000068: ncbiprotein

position:39588:1
position: 39588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46032:1
position: 46032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39588-39744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:40884-41258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:41382-41507:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:41858-41980:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:42319-42441:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:42800-42965:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43117-43335:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43997-44115:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:44201-44340:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:44497-44641:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:44725-44868:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:45031-45255:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:45715-45860:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:46000-46032:1:exon

LOC117009589
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009589
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: low-density lipoprotein receptor-like isoform X2
translation: MGPGSTGIRAGTAGSGSGTTGRRPGSTGTSSGNTGILLLLLGAATVTATPTTAPSPCASDQLRCGDGSCLSRSFACDGDRDCPDGEDELGCPSPPPSWPCDPSFFTCRDGSCIAWLWRCDGDPDCRDGNDEENCGTPPPPRPCPSLQFPCGSGECVHRRWRCDGTPDCRDGSDEEGCGTAPPCPSGQLRCRDGRCIPGARACDGTPDCRDGDDEEECPDAPSCSPPHRFRCRSGECIATAQVCDGQRHCRDWSDEPLKECGVNECLAGNGGCSHGCRDLRVGFECLCPPGFSLNPDNRTCHSPPGTLLVSTRHEVLALGGPEPQTLQRSLKHVAALDIGVEEGSLFWGDPSEGLIYRAPLAPGPAVPLGVVPGPGSPAGIALDWIHRLLYWTEPGSGRVAVSDRSGTRHRTLHRDPDARPWGVVVDPLNGYLYWSDWGSRPHIAQGAQDGAPPKLLVTEDMERPQGLALDQSSQRLYWTDGRLHTVSSVALDGSGRRTHLRDPQHLAQPFGLAVFQDWAFWTDPHQGSLVAARLQGGSPTPQVVAQELFSPEAVVVLHPGRQPAGPNLCEGPGGLCSFLCLPSPARGPGSPRFRCACPDGEHLDTDGHTCVTEPPGTPELLPRNFSREGNASRGALGQTGGPGGARPGVTALGVLLPLGLVLCLGVAARALWQGWHRRNTKSISFTNATFRKGPADPLDGGGLGDPLRPLTSEDDEP
SIO_010081: LOC117009589
subclass of: SO_0000673
so part of: LOC117009589
location: join(39588..39744,40884..41258,41382..41507,41858..41980,42319..42441,42800..42965,43117..43335,43997..44115,44201..44340,44497..44641,44725..44868,45031..45093,45181..45255,45715..45860,46000..46032)
location: region:39588-46032:1
so has part: feature:39588-39744:1:exon
so has part: feature:40884-41258:1:exon
so has part: feature:41382-41507:1:exon
so has part: feature:41858-41980:1:exon
so has part: feature:42319-42441:1:exon
so has part: feature:42800-42965:1:exon
so has part: feature:43117-43335:1:exon
so has part: feature:43997-44115:1:exon
so has part: feature:44201-44340:1:exon
so has part: feature:44497-44641:1:exon
so has part: feature:44725-44868:1:exon
so has part: feature:45031-45093:1:exon
so has part: feature:45181-45255:1:exon
so has part: feature:45715-45860:1:exon
so has part: feature:46000-46032:1:exon

XP_032939743.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39588-39744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:40884-41258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:41382-41507:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:41858-41980:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:42319-42441:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:42800-42965:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43117-43335:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43997-44115:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:44201-44340:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:44497-44641:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:44725-44868:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:45031-45093:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:45181-45255:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:45715-45860:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:46000-46032:1:exon

LOC117009589
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009589
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: low-density lipoprotein receptor-like isoform X3
translation: MGPGSTGIRAGTAGSGSGTTGRRPGSTGTSSGNTGILLLLLGAATVTATPTTAPSPCASDQLRCGDGSCLSRSFACDGDRDCPDGEDELGCPSPPPSWPCDPSFFTCRDGSCIAWLWRCDGDPDCRDGNDEENCGTPPPPRPCPSLQFPCGSGECVHRRWRCDGTPDCRDGSDEEGCGTAPPCPSGQLRCRDGRCIPGARACDGTPDCRDGDDEEECPDAPSCSPPHRFRCRSGECIATAQVCDGQRHCRDWSDEPLKECGVNECLAGNGGCSHGCRDLRVGFECLCPPGFSLNPDNRTCHSPPGTLLVSTRHEVLALGGPEPQTLQRSLKHVAALDIGVEEGSLFWGDPSEGLIYRAPLAPGPAVPLGVVPGPGSPAGIALDWIHRLLYWTEPGSGRVAVSDRSGTRHRTLHRDPDARPWGVVVDPLNGYLYWSDWGSRPHIAQGAQDGAPPKLLVTEDMERPQGLALDQSSQRLYWTDGRLHTVSSVALDGSGRRTHLRDPQHLAQPFGLAVFQDWAFWTDPHQGSLVAARLQGGSPTPQVVAQELFSPEAVVVLHPGRQPAGPNLCEGPGGLCSFLCLPSPARGPGSPRFRCACPDGEHLDTDGHTCVTGALGQTGGPGGARPGVTALGVLLPLGLVLCLGVAARALWQGWHRRNTKSISFTNATFRKGPADPLDGGGLGDPLRPLTSEDDEP
SIO_010081: LOC117009589
subclass of: SO_0000673
so part of: LOC117009589
location: join(39588..39744,40884..41258,41382..41507,41858..41980,42319..42441,42800..42965,43117..43335,43997..44115,44201..44340,44497..44641,44725..44868,45181..45255,45715..45860,46000..46032)
location: region:39588-46032:1
so has part: feature:39588-39744:1:exon
so has part: feature:40884-41258:1:exon
so has part: feature:41382-41507:1:exon
so has part: feature:41858-41980:1:exon
so has part: feature:42319-42441:1:exon
so has part: feature:42800-42965:1:exon
so has part: feature:43117-43335:1:exon
so has part: feature:43997-44115:1:exon
so has part: feature:44201-44340:1:exon
so has part: feature:44497-44641:1:exon
so has part: feature:44725-44868:1:exon
so has part: feature:45181-45255:1:exon
so has part: feature:45715-45860:1:exon
so has part: feature:46000-46032:1:exon

XP_032939744.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39588-39744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:40884-41258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:41382-41507:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:41858-41980:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:42319-42441:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:42800-42965:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43117-43335:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43997-44115:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:44201-44340:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:44497-44641:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:44725-44868:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:45181-45255:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:45715-45860:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:46000-46032:1:exon

LOC117009574
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009574
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <47486..56217
location: region:47486-56217:1
so has part: feature:47486-56217:1:exon
subclass of: SO_0000010

117009574
type: Gene
SIO_000068: ncbigene

position:47486:1
position: 47486
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:56217:1
position: 56217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47486-56217:1:exon

LOC117009574
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009574
product: KH-type splicing regulatory protein
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083827.1
SIO_010081: LOC117009574
subclass of: SO_0000673
so part of: LOC117009574
location: join(<47486..47578,48710..48818,48938..48976,49424..49463,49797..49846,49941..50012,50125..50182,50568..50739,50934..51032,51126..51224,51789..51891,51984..52084,52771..52912,53461..53621,53822..53940,54018..54106,54654..54845,55142..55219,55299..55459,55653..56217)
location: region:47486-56217:1
so has part: feature:47486-47578:1:exon
so has part: feature:48710-48818:1:exon
so has part: feature:48938-48976:1:exon
so has part: feature:49424-49463:1:exon
so has part: feature:49797-49846:1:exon
so has part: feature:49941-50012:1:exon
so has part: feature:50125-50182:1:exon
so has part: feature:50568-50739:1:exon
so has part: feature:50934-51032:1:exon
so has part: feature:51126-51224:1:exon
so has part: feature:51789-51891:1:exon
so has part: feature:51984-52084:1:exon
so has part: feature:52771-52912:1:exon
so has part: feature:53461-53621:1:exon
so has part: feature:53822-53940:1:exon
so has part: feature:54018-54106:1:exon
so has part: feature:54654-54845:1:exon
so has part: feature:55142-55219:1:exon
so has part: feature:55299-55459:1:exon
so has part: feature:55653-56217:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47486-47578:1:exon

position:47578:1
position: 47578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:48710-48818:1:exon

position:48710:1
position: 48710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48818:1
position: 48818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:48938-48976:1:exon

position:48938:1
position: 48938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48976:1
position: 48976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:49424-49463:1:exon

position:49424:1
position: 49424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49463:1
position: 49463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:49797-49846:1:exon

position:49797:1
position: 49797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49846:1
position: 49846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:49941-50012:1:exon

position:49941:1
position: 49941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50012:1
position: 50012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:50125-50182:1:exon

position:50125:1
position: 50125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50182:1
position: 50182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:50568-50739:1:exon

position:50568:1
position: 50568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50739:1
position: 50739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:50934-51032:1:exon

position:50934:1
position: 50934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51032:1
position: 51032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:51126-51224:1:exon

position:51126:1
position: 51126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51224:1
position: 51224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:51789-51891:1:exon

position:51789:1
position: 51789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51891:1
position: 51891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:51984-52084:1:exon

position:51984:1
position: 51984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52084:1
position: 52084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:52771-52912:1:exon

position:52771:1
position: 52771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52912:1
position: 52912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:53461-53621:1:exon

position:53461:1
position: 53461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53621:1
position: 53621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:53822-53940:1:exon

position:53822:1
position: 53822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53940:1
position: 53940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:54018-54106:1:exon

position:54018:1
position: 54018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54106:1
position: 54106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:54654-54845:1:exon

position:54654:1
position: 54654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54845:1
position: 54845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:55142-55219:1:exon

position:55142:1
position: 55142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55219:1
position: 55219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:55299-55459:1:exon

position:55299:1
position: 55299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55459:1
position: 55459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:55653-56217:1:exon

position:55653:1
position: 55653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117009574
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009574
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: far upstream element-binding protein 2
translation: GGGPGGGGGGGGGGGTGRKDAFADAVQRARQIAAKIGGDAAPPVPNNNPPPPDFGGFGGQKRQLEDGDQPESKKLAAQGEALPAPMGPIHPPPRTTVTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGSPESVQKAKALLDDIVSRGRGGPPGPFPDATNGQNGTVQELMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGEPYKVQQACEMVLDILRERDQGGFGDRSDYGARLGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPERCEHAARIINDLLQSLRSGPPGPPGPGLPPGGRGRGRGQGSWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGTPQQIDHAKQLIEEKIEGPLCPVGPGPGPGGPPGPAGPMGPFNPGPFNQGPPGAPPHPGGPPPHQYPPQGWGNTYPQWQPPAPHDPSKAPAPDPNAAWAAYYSHYYQQPPGPVPAQPPPAAPPVQGEPPQPPPTGQADYTKAWEEYYKKLGQQPQQPGAPPQQDYTKAWEEYYKKQAAQVASGGGPGAPPGPQPDYSAAWAEYYRQQAAYYGQTPGGAGPAPPPAQQGQQAQ
SIO_010081: LOC117009574
subclass of: SO_0000673
so part of: LOC117009574
location: join(<47486..47578,48710..48818,48938..48976,49424..49463,49797..49846,49941..50012,50125..50182,50568..50739,50934..51032,51126..51224,51789..51891,51984..52084,52771..52912,53461..53621,53822..53940,54018..54106,54654..54845,55142..55219,55299..55459,55653..55661)
location: region:47486-55661:1
so has part: feature:47486-47578:1:exon
so has part: feature:48710-48818:1:exon
so has part: feature:48938-48976:1:exon
so has part: feature:49424-49463:1:exon
so has part: feature:49797-49846:1:exon
so has part: feature:49941-50012:1:exon
so has part: feature:50125-50182:1:exon
so has part: feature:50568-50739:1:exon
so has part: feature:50934-51032:1:exon
so has part: feature:51126-51224:1:exon
so has part: feature:51789-51891:1:exon
so has part: feature:51984-52084:1:exon
so has part: feature:52771-52912:1:exon
so has part: feature:53461-53621:1:exon
so has part: feature:53822-53940:1:exon
so has part: feature:54018-54106:1:exon
so has part: feature:54654-54845:1:exon
so has part: feature:55142-55219:1:exon
so has part: feature:55299-55459:1:exon
so has part: feature:55653-55661:1:exon

XP_032939718.1
type: Protein
SIO_000068: ncbiprotein

position:55661:1
position: 55661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47486-47578:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:48710-48818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48938-48976:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:49424-49463:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:49797-49846:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:49941-50012:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:50125-50182:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:50568-50739:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:50934-51032:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:51126-51224:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:51789-51891:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:51984-52084:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:52771-52912:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:53461-53621:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:53822-53940:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:54018-54106:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:54654-54845:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:55142-55219:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:55299-55459:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:55653-55661:1:exon

GTF2F1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: GTF2F1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 56604..63334
location: region:56604-63334:1
so has part: feature:56604-63334:1:exon
subclass of: SO_0000010

117009549
type: Gene
SIO_000068: ncbigene

position:56604:1
position: 56604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63334:1
position: 63334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56604-63334:1:exon

GTF2F1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: GTF2F1
product: general transcription factor IIF subunit 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083793.2
SIO_010081: GTF2F1
subclass of: SO_0000673
so part of: GTF2F1
location: join(56604..56719,56853..56913,57131..57177,57531..57603,57689..57882,59999..60169,60594..60778,61077..61227,61556..61620,61723..61839,61923..61996,62091..62226,62490..62613,62712..63334)
location: region:56604-63334:1
so has part: feature:56604-56719:1:exon
so has part: feature:56853-56913:1:exon
so has part: feature:57131-57177:1:exon
so has part: feature:57531-57603:1:exon
so has part: feature:57689-57882:1:exon
so has part: feature:59999-60169:1:exon
so has part: feature:60594-60778:1:exon
so has part: feature:61077-61227:1:exon
so has part: feature:61556-61620:1:exon
so has part: feature:61723-61839:1:exon
so has part: feature:61923-61996:1:exon
so has part: feature:62091-62226:1:exon
so has part: feature:62490-62613:1:exon
so has part: feature:62712-63334:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:56604-56719:1:exon

position:56719:1
position: 56719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:56853-56913:1:exon

position:56853:1
position: 56853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56913:1
position: 56913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:57131-57177:1:exon

position:57131:1
position: 57131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57177:1
position: 57177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:57531-57603:1:exon

position:57531:1
position: 57531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57603:1
position: 57603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:57689-57882:1:exon

position:57689:1
position: 57689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57882:1
position: 57882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:59999-60169:1:exon

position:59999:1
position: 59999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60169:1
position: 60169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:60594-60778:1:exon

position:60594:1
position: 60594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60778:1
position: 60778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:61077-61227:1:exon

position:61077:1
position: 61077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61227:1
position: 61227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:61556-61620:1:exon

position:61556:1
position: 61556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61620:1
position: 61620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:61723-61839:1:exon

position:61723:1
position: 61723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61839:1
position: 61839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:61923-61996:1:exon

position:61923:1
position: 61923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61996:1
position: 61996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:62091-62226:1:exon

position:62091:1
position: 62091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62226:1
position: 62226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:62490-62613:1:exon

position:62490:1
position: 62490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62613:1
position: 62613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:62712-63334:1:exon

position:62712:1
position: 62712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GTF2F1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: GTF2F1
product: general transcription factor IIF subunit 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083794.2
SIO_010081: GTF2F1
subclass of: SO_0000673
so part of: GTF2F1
location: join(56604..56719,56853..56913,57131..57177,57531..57603,57689..57882,59999..60169,60594..60778,61077..61227,61559..61620,61723..61839,61923..61996,62091..62226,62490..62613,62712..63334)
location: region:56604-63334:1
so has part: feature:56604-56719:1:exon
so has part: feature:56853-56913:1:exon
so has part: feature:57131-57177:1:exon
so has part: feature:57531-57603:1:exon
so has part: feature:57689-57882:1:exon
so has part: feature:59999-60169:1:exon
so has part: feature:60594-60778:1:exon
so has part: feature:61077-61227:1:exon
so has part: feature:61559-61620:1:exon
so has part: feature:61723-61839:1:exon
so has part: feature:61923-61996:1:exon
so has part: feature:62091-62226:1:exon
so has part: feature:62490-62613:1:exon
so has part: feature:62712-63334:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:56604-56719:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:56853-56913:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:57131-57177:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:57531-57603:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:57689-57882:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:59999-60169:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:60594-60778:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:61077-61227:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:61559-61620:1:exon

position:61559:1
position: 61559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:61723-61839:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:61923-61996:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:62091-62226:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:62490-62613:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:62712-63334:1:exon

GTF2F1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: GTF2F1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription factor IIF subunit 1 isoform X1
translation: MVTHRQTWRSRGVACRGAVSGHVPLISGGSRGRRRIPPEPDLGVRPTLTPVMAALGSSSQVVTEYVVRVPKNTPKRYNIMAFNSADRVTLSTWAQARMERDMSNKRIYAEEELPESGAGSEFHRKLREEARRKKYGIVLKEFRAEDQPWLLRVNGKTGRKFRGVKKGGVTENASYYVFTQCPDGAFEAFPVRNWYNFTPLARHRTLTAEEAEEEWERRNKVLNHFSIMQQRRLRDQDEEEEDKDKGRKAPGKGGGLRIHDLEEDLELSSEESEGSEAEGEKAARPKAAGGRPRKKKRKGRKGSEDEALEDSDDGDFEGQEVDYMSDGSSSSGEEETGKAKAPKEEEEGPKGIDEASESSEESEEEKAEEKEEEEEGKATPTPQEKKKKRESSDESQTSEESDIDSETSSALFMAKKKTPPKRERRASGSSSRGGSRPGTPTDSGGTGGTLRAAAARLEQGRRAAPGGSEPPPQKRLKTEPGPPSGKSTPQPHSGKSTPSSGEVQLTEEAVRRYLSRKPMTTKDLLKKFQTKRTGLSSDATVNALAQLLKRLDPERKLIADKMHFFLKE
SIO_010081: GTF2F1
subclass of: SO_0000673
so part of: GTF2F1
location: join(56616..56719,56853..56913,57131..57177,57531..57603,57689..57882,59999..60169,60594..60778,61077..61227,61556..61620,61723..61839,61923..61996,62091..62226,62490..62613,62712..62916)
location: region:56616-62916:1
so has part: feature:56616-56719:1:exon
so has part: feature:56853-56913:1:exon
so has part: feature:57131-57177:1:exon
so has part: feature:57531-57603:1:exon
so has part: feature:57689-57882:1:exon
so has part: feature:59999-60169:1:exon
so has part: feature:60594-60778:1:exon
so has part: feature:61077-61227:1:exon
so has part: feature:61556-61620:1:exon
so has part: feature:61723-61839:1:exon
so has part: feature:61923-61996:1:exon
so has part: feature:62091-62226:1:exon
so has part: feature:62490-62613:1:exon
so has part: feature:62712-62916:1:exon

XP_032939684.2
type: Protein
SIO_000068: ncbiprotein

position:56616:1
position: 56616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62916:1
position: 62916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56616-56719:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:56853-56913:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:57131-57177:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:57531-57603:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:57689-57882:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:59999-60169:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:60594-60778:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:61077-61227:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:61556-61620:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:61723-61839:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:61923-61996:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:62091-62226:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:62490-62613:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:62712-62916:1:exon

GTF2F1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: GTF2F1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription factor IIF subunit 1 isoform X2
translation: MVTHRQTWRSRGVACRGAVSGHVPLISGGSRGRRRIPPEPDLGVRPTLTPVMAALGSSSQVVTEYVVRVPKNTPKRYNIMAFNSADRVTLSTWAQARMERDMSNKRIYAEEELPESGAGSEFHRKLREEARRKKYGIVLKEFRAEDQPWLLRVNGKTGRKFRGVKKGGVTENASYYVFTQCPDGAFEAFPVRNWYNFTPLARHRTLTAEEAEEEWERRNKVLNHFSIMQQRRLRDQDEEEEDKDKGRKAPGKGGGLRIHDLEEDLELSSEESEGSEAEGEKAARPKAAGGRPRKKKRKGRKGSEDEALEDSDDGDFEGQEVDYMSDGSSSGEEETGKAKAPKEEEEGPKGIDEASESSEESEEEKAEEKEEEEEGKATPTPQEKKKKRESSDESQTSEESDIDSETSSALFMAKKKTPPKRERRASGSSSRGGSRPGTPTDSGGTGGTLRAAAARLEQGRRAAPGGSEPPPQKRLKTEPGPPSGKSTPQPHSGKSTPSSGEVQLTEEAVRRYLSRKPMTTKDLLKKFQTKRTGLSSDATVNALAQLLKRLDPERKLIADKMHFFLKE
SIO_010081: GTF2F1
subclass of: SO_0000673
so part of: GTF2F1
location: join(56616..56719,56853..56913,57131..57177,57531..57603,57689..57882,59999..60169,60594..60778,61077..61227,61559..61620,61723..61839,61923..61996,62091..62226,62490..62613,62712..62916)
location: region:56616-62916:1
so has part: feature:56616-56719:1:exon
so has part: feature:56853-56913:1:exon
so has part: feature:57131-57177:1:exon
so has part: feature:57531-57603:1:exon
so has part: feature:57689-57882:1:exon
so has part: feature:59999-60169:1:exon
so has part: feature:60594-60778:1:exon
so has part: feature:61077-61227:1:exon
so has part: feature:61559-61620:1:exon
so has part: feature:61723-61839:1:exon
so has part: feature:61923-61996:1:exon
so has part: feature:62091-62226:1:exon
so has part: feature:62490-62613:1:exon
so has part: feature:62712-62916:1:exon

XP_032939685.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56616-56719:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:56853-56913:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:57131-57177:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:57531-57603:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:57689-57882:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:59999-60169:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:60594-60778:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:61077-61227:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:61559-61620:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:61723-61839:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:61923-61996:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:62091-62226:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:62490-62613:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:62712-62916:1:exon

PSPN
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: PSPN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 63769..64511
location: region:63769-64511:1
so has part: feature:63769-64511:1:exon
subclass of: SO_0000010

117009551
type: Gene
SIO_000068: ncbigene

position:63769:1
position: 63769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64511:1
position: 64511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63769-64511:1:exon

PSPN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PSPN
product: persephin
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083796.1
SIO_010081: PSPN
subclass of: SO_0000673
so part of: PSPN
location: 63769..64511
location: region:63769-64511:1
so has part: feature:63769-64511:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:63769-64511:1:exon

PSPN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PSPN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: persephin
translation: MARPGLSWCFLLLLLLLLLLLGPCRAPPAAPPAAPCGLRSVSVGVGALGLGYPSPETVVFRYCGGGCPAPPTLHGLALGAVLGPGGPAGGPCCRPTRYEDVVFLDSGLRWQRLPQLSAGACACLG
SIO_010081: PSPN
subclass of: SO_0000673
so part of: PSPN
location: 63831..64208
location: region:63831-64208:1
so has part: feature:63831-64208:1:exon

XP_032939687.1
type: Protein
SIO_000068: ncbiprotein

position:63831:1
position: 63831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64208:1
position: 64208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63831-64208:1:exon

ALKBH7
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: ALKBH7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(64426..65837)
location: region:64426-65837:-1
so has part: feature:64426-65837:-1:exon
subclass of: SO_0000010

117009426
type: Gene
SIO_000068: ncbigene

position:64426:-1
position: 64426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65837:-1
position: 65837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64426-65837:-1:exon

ALKBH7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ALKBH7
product: alkB homolog 7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083662.1
SIO_010081: ALKBH7
subclass of: SO_0000673
so part of: ALKBH7
location: complement(join(64426..64529,64787..64905,64998..65122,65234..65404,65523..65837))
location: region:64426-65837:-1
so has part: feature:65523-65837:-1:exon
so has part: feature:65234-65404:-1:exon
so has part: feature:64998-65122:-1:exon
so has part: feature:64787-64905:-1:exon
so has part: feature:64426-64529:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65523-65837:-1:exon

position:65523:-1
position: 65523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:65234-65404:-1:exon

position:65234:-1
position: 65234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65404:-1
position: 65404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:64998-65122:-1:exon

position:64998:-1
position: 64998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65122:-1
position: 65122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:64787-64905:-1:exon

position:64787:-1
position: 64787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64905:-1
position: 64905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:64426-64529:-1:exon

position:64529:-1
position: 64529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ALKBH7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ALKBH7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial
translation: MQRARGLWRAGVAATLGGSRALSGPPGAGSGAPGAGSGGPGGGLGPEAEADPALLRASSPELARRLRGLALVRGGFVSEGEAAELLREVEPGLRRGRYQNDHWDRAITGYRETERGLRGGAGRALLLRVTPAFPPRSPPRPSAHVLDLLPGGAVGPHVDSVKFCGCTIAGVSLLSPSVLRLQSLRDPQDWVELLLEPGSLYILRGAARYEFTHEILPDEKSFFGGLRVPRGRRVALIFRNDPPETPPDPLSDLPAFIEDPREPPAPK
SIO_010081: ALKBH7
subclass of: SO_0000673
so part of: ALKBH7
location: complement(join(64456..64529,64787..64905,64998..65122,65234..65404,65523..65837))
location: region:64456-65837:-1
so has part: feature:65523-65837:-1:exon
so has part: feature:65234-65404:-1:exon
so has part: feature:64998-65122:-1:exon
so has part: feature:64787-64905:-1:exon
so has part: feature:64456-64529:-1:exon

XP_032939553.1
type: Protein
SIO_000068: ncbiprotein

position:64456:-1
position: 64456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65523-65837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:65234-65404:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:64998-65122:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:64787-64905:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:64456-64529:-1:exon

LOC117009550
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009550
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(66336..68629)
location: region:66336-68629:-1
so has part: feature:66336-68629:-1:exon
subclass of: SO_0000010

117009550
type: Gene
SIO_000068: ncbigene

position:66336:-1
position: 66336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68629:-1
position: 68629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66336-68629:-1:exon

LOC117009550
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009550
product: caseinolytic mitochondrial matrix peptidase proteolytic subunit
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083795.2
SIO_010081: LOC117009550
subclass of: SO_0000673
so part of: LOC117009550
location: complement(join(66336..66607,66683..66788,67151..67338,67674..67770,67856..67927,68208..68306,68609..68629))
location: region:66336-68629:-1
so has part: feature:68609-68629:-1:exon
so has part: feature:68208-68306:-1:exon
so has part: feature:67856-67927:-1:exon
so has part: feature:67674-67770:-1:exon
so has part: feature:67151-67338:-1:exon
so has part: feature:66683-66788:-1:exon
so has part: feature:66336-66607:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:68609-68629:-1:exon

position:68609:-1
position: 68609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:68208-68306:-1:exon

position:68208:-1
position: 68208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68306:-1
position: 68306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:67856-67927:-1:exon

position:67856:-1
position: 67856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67927:-1
position: 67927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:67674-67770:-1:exon

position:67674:-1
position: 67674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67770:-1
position: 67770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:67151-67338:-1:exon

position:67151:-1
position: 67151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67338:-1
position: 67338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:66683-66788:-1:exon

position:66683:-1
position: 66683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66788:-1
position: 66788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:66336-66607:-1:exon

position:66607:-1
position: 66607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009550
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent Clp protease proteolytic subunit, mitochondrial
translation: MGPGVARSLRRAWAGARRCLHRTVPARAPPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSLASLVIAQLLFLQSESNKKPIHMYINSPGGSVTSGLAIYDTMQYVLTPVCTWCVGQAASMGSLLLAAGAPGMRHALPNARIMVHQPSGGARGQATDIAIQAEEILKLKRQINGLYSKHTGQPLPVIEAAMERDRYMSPVEAQEFGLLDQVLVHPPPRGEDEPRLVQKEPPNSPSGPPQVPPAC
SIO_010081: LOC117009550
subclass of: SO_0000673
so part of: LOC117009550
location: complement(join(66435..66607,66683..66788,67151..67338,67674..67770,67856..67927,68208..68306,68609..68626))
location: region:66435-68626:-1
so has part: feature:68609-68626:-1:exon
so has part: feature:68208-68306:-1:exon
so has part: feature:67856-67927:-1:exon
so has part: feature:67674-67770:-1:exon
so has part: feature:67151-67338:-1:exon
so has part: feature:66683-66788:-1:exon
so has part: feature:66435-66607:-1:exon

XP_032939686.1
type: Protein
SIO_000068: ncbiprotein

position:66435:-1
position: 66435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68626:-1
position: 68626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68609-68626:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:68208-68306:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:67856-67927:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:67674-67770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:67151-67338:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:66683-66788:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:66435-66607:-1:exon

LOC117009427
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009427
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 70402..>71219
location: region:70402-71219:1
so has part: feature:70402-71219:1:exon
subclass of: SO_0000010

117009427
type: Gene
SIO_000068: ncbigene

position:70402:1
position: 70402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71219:1
position: 71219
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70402-71219:1:exon

LOC117009427
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009427
product: MHC class II regulatory factor RFX1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 93% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_033083663.1
SIO_010081: LOC117009427
subclass of: SO_0000673
so part of: LOC117009427
location: join(70402..70796,70883..70971,71072..>71219)
location: region:70402-71219:1
so has part: feature:70402-70796:1:exon
so has part: feature:70883-70971:1:exon
so has part: feature:71072-71219:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:70402-70796:1:exon

position:70796:1
position: 70796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:70883-70971:1:exon

position:70883:1
position: 70883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70971:1
position: 70971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:71072-71219:1:exon

position:71072:1
position: 71072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117009427
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009427
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MHC class II regulatory factor RFX1-like
translation: MGWGGMVGVGVPRAQAVLEGLNRGCRAPRAEPGVPPLCPQRSPAPSATAAPKPGTPQEVQQLPPVQHVFPTPVSYVEGGDGSYPPGAIRSGSFPFAETPLFGQNSGGYFEGAGGAAVQPSPPPPPPPASSQAPPAST
SIO_010081: LOC117009427
subclass of: SO_0000673
so part of: LOC117009427
location: join(70623..70796,70883..70971,71072..>71219)
location: region:70623-71219:1
so has part: feature:70623-70796:1:exon
so has part: feature:70883-70971:1:exon
so has part: feature:71072-71219:1:exon

XP_032939554.1
type: Protein
SIO_000068: ncbiprotein

position:70623:1
position: 70623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70623-70796:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:70883-70971:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:71072-71219:1:exon

RFX1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: RFX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 71229..76865
location: region:71229-76865:1
so has part: feature:71229-76865:1:exon
subclass of: SO_0000010

117009547
type: Gene
SIO_000068: ncbigene

position:71229:1
position: 71229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76865:1
position: 76865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71229-76865:1:exon

RFX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: RFX1
product: regulatory factor X1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033083792.1
SIO_010081: RFX1
subclass of: SO_0000673
so part of: RFX1
location: join(71229..71400,73373..73554,73652..73771,73846..73961,74049..74167,74246..74334,74611..74762,75009..75106,75302..75451,75641..75849,75959..76112,76274..76319,76517..76865)
location: region:71229-76865:1
so has part: feature:71229-71400:1:exon
so has part: feature:73373-73554:1:exon
so has part: feature:73652-73771:1:exon
so has part: feature:73846-73961:1:exon
so has part: feature:74049-74167:1:exon
so has part: feature:74246-74334:1:exon
so has part: feature:74611-74762:1:exon
so has part: feature:75009-75106:1:exon
so has part: feature:75302-75451:1:exon
so has part: feature:75641-75849:1:exon
so has part: feature:75959-76112:1:exon
so has part: feature:76274-76319:1:exon
so has part: feature:76517-76865:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:71229-71400:1:exon

position:71400:1
position: 71400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:73373-73554:1:exon

position:73373:1
position: 73373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73554:1
position: 73554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:73652-73771:1:exon

position:73652:1
position: 73652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73771:1
position: 73771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:73846-73961:1:exon

position:73846:1
position: 73846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73961:1
position: 73961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:74049-74167:1:exon

position:74049:1
position: 74049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74167:1
position: 74167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:74246-74334:1:exon

position:74246:1
position: 74246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74334:1
position: 74334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:74611-74762:1:exon

position:74611:1
position: 74611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74762:1
position: 74762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:75009-75106:1:exon

position:75009:1
position: 75009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75106:1
position: 75106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:75302-75451:1:exon

position:75302:1
position: 75302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75451:1
position: 75451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:75641-75849:1:exon

position:75641:1
position: 75641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75849:1
position: 75849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:75959-76112:1:exon

position:75959:1
position: 75959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76112:1
position: 76112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:76274-76319:1:exon

position:76274:1
position: 76274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76319:1
position: 76319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:76517-76865:1:exon

position:76517:1
position: 76517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RFX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: RFX1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: MHC class II regulatory factor RFX1
translation: MYVAGGQILGSPPAPPPPQSGTATPGTPGGGTYVIQGGYMGGGGAAYAHTTRASPATVQWLLDNYETAEGVSLPRSALYCHYLLHCQGHKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKAGSPLLRLVEDQQHLAMRQQPFAQKQRLKPVQKMEGGVTNGVSSGPAPPSVPDISAQVQQYQQFLDASRTLPEFPEINVQGKGLPEGAGPEDLRVFQQLYREHCEAIVDVMINLQFSLVEMLWKSFWRCSGETDAQEEAERRLPRRRLLLLARHEPVLRWVRDCDHALYQGLVEILVPDVLRPIPSALTQAIRNFAKSLESWLGNAMVSMPEEMVRVKAAAAGAFAQTLRRYTSLNHLAQAARAVLQNTAQISQMLSDLNRVDFANVQEQAAWVCRCEARVVQRLEQDFKATLGQQHSLEQWAAWLDAVVGRVLRPHLGTPGLPRAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLVEQRVARARGTCPIAVMGEFANLTSSLNSQDPDKDEEEEEEEESDEELPAELGLGGGEGPPDALEPPLEPPLEPPPAKLPRADPRGLFVQALPSS
SIO_010081: RFX1
subclass of: SO_0000673
so part of: RFX1
location: join(71229..71400,73373..73554,73652..73771,73846..73961,74049..74167,74246..74334,74611..74762,75009..75106,75302..75451,75641..75849,75959..76112,76274..76319,76517..76701)
location: region:71229-76701:1
so has part: feature:71229-71400:1:exon
so has part: feature:73373-73554:1:exon
so has part: feature:73652-73771:1:exon
so has part: feature:73846-73961:1:exon
so has part: feature:74049-74167:1:exon
so has part: feature:74246-74334:1:exon
so has part: feature:74611-74762:1:exon
so has part: feature:75009-75106:1:exon
so has part: feature:75302-75451:1:exon
so has part: feature:75641-75849:1:exon
so has part: feature:75959-76112:1:exon
so has part: feature:76274-76319:1:exon
so has part: feature:76517-76701:1:exon

XP_032939683.1
type: Protein
SIO_000068: ncbiprotein

position:76701:1
position: 76701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71229-71400:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:73373-73554:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:73652-73771:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:73846-73961:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:74049-74167:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:74246-74334:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:74611-74762:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:75009-75106:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:75302-75451:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:75641-75849:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:75959-76112:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:76274-76319:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:76517-76701:1:exon

DCAF15
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: DCAF15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(77411..81617)
location: region:77411-81617:-1
so has part: feature:77411-81617:-1:exon
subclass of: SO_0000010

117009428
type: Gene
SIO_000068: ncbigene

position:77411:-1
position: 77411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81617:-1
position: 81617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77411-81617:-1:exon

DCAF15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: DCAF15
product: DDB1 and CUL4 associated factor 15
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083664.1
SIO_010081: DCAF15
subclass of: SO_0000673
so part of: DCAF15
location: complement(join(77411..77685,77943..78058,78520..78624,78692..78777,78854..78982,79067..79158,79260..79700,79789..79959,80052..80173,80251..80357,80448..80583,80754..80851,81489..81617))
location: region:77411-81617:-1
so has part: feature:81489-81617:-1:exon
so has part: feature:80754-80851:-1:exon
so has part: feature:80448-80583:-1:exon
so has part: feature:80251-80357:-1:exon
so has part: feature:80052-80173:-1:exon
so has part: feature:79789-79959:-1:exon
so has part: feature:79260-79700:-1:exon
so has part: feature:79067-79158:-1:exon
so has part: feature:78854-78982:-1:exon
so has part: feature:78692-78777:-1:exon
so has part: feature:78520-78624:-1:exon
so has part: feature:77943-78058:-1:exon
so has part: feature:77411-77685:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81489-81617:-1:exon

position:81489:-1
position: 81489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:80754-80851:-1:exon

position:80754:-1
position: 80754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80851:-1
position: 80851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:80448-80583:-1:exon

position:80448:-1
position: 80448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80583:-1
position: 80583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:80251-80357:-1:exon

position:80251:-1
position: 80251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80357:-1
position: 80357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:80052-80173:-1:exon

position:80052:-1
position: 80052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80173:-1
position: 80173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:79789-79959:-1:exon

position:79789:-1
position: 79789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79959:-1
position: 79959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:79260-79700:-1:exon

position:79260:-1
position: 79260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79700:-1
position: 79700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:79067-79158:-1:exon

position:79067:-1
position: 79067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79158:-1
position: 79158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:78854-78982:-1:exon

position:78854:-1
position: 78854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78982:-1
position: 78982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:78692-78777:-1:exon

position:78692:-1
position: 78692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78777:-1
position: 78777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:78520-78624:-1:exon

position:78520:-1
position: 78520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78624:-1
position: 78624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:77943-78058:-1:exon

position:77943:-1
position: 77943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78058:-1
position: 78058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:77411-77685:-1:exon

position:77685:-1
position: 77685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DCAF15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: DCAF15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DDB1- and CUL4-associated factor 15
translation: MAPSSKAERGGPGGKRGAAGGTGAGAAPRGCRDHLVRQLDRVRLSGQLSPRLFRKLPPRACVSLKSIVDDEFLWAGHIFLGFSKCGRYVLSYTRSSGDDDFSFYLYHLYWWEFNVHSKMRLVRQVRLFQDEEIYSDLYLIVCEWPGDSDKVIVFGFNTLQVNMMLMSDENHRDVYVSTVAMPPPWHCRACRRATAAPGEPPAACLRHGFLLHTKFQVVYPFPTFQPAFQLRKDHVVLLNTSFSLVACAITVHPAGDSSSQQILYERRNVPGPNRRGENAPPQLPEELEGAGGAPPAAQPPPGAPHPPELPPAPPSPAVAKAKEFVADLFRRAQGAGGGSGGAHGEGGDDPPPSPRGPPPETPPTVPGSPPGEPQPPGSSPEPGYVNYTKLRYVLEPGEPPVDLEDDKISLPFVVTDLSGRSLRLLQDRATAQGQYLTVEQLTLDFEYVINEVIRNDAAWSRQFCSFSDYDIVILEVCPETNQVVINIGLLLLAFPSPDEEGQLRPRTYHTSLKVAWDLNSGTFTTVGVGDLTEVKGQTSGSVWSSYRKGCVDTVMRWLVPEGPGRGVHRMTNEALHKGCSLKVLADNERYTWIVL
SIO_010081: DCAF15
subclass of: SO_0000673
so part of: DCAF15
location: complement(join(77630..77685,77943..78058,78520..78624,78692..78777,78854..78982,79067..79158,79260..79700,79789..79959,80052..80173,80251..80357,80448..80583,80754..80851,81489..81617))
location: region:77630-81617:-1
so has part: feature:81489-81617:-1:exon
so has part: feature:80754-80851:-1:exon
so has part: feature:80448-80583:-1:exon
so has part: feature:80251-80357:-1:exon
so has part: feature:80052-80173:-1:exon
so has part: feature:79789-79959:-1:exon
so has part: feature:79260-79700:-1:exon
so has part: feature:79067-79158:-1:exon
so has part: feature:78854-78982:-1:exon
so has part: feature:78692-78777:-1:exon
so has part: feature:78520-78624:-1:exon
so has part: feature:77943-78058:-1:exon
so has part: feature:77630-77685:-1:exon

XP_032939555.1
type: Protein
SIO_000068: ncbiprotein

position:77630:-1
position: 77630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81489-81617:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:80754-80851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80448-80583:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:80251-80357:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:80052-80173:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:79789-79959:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:79260-79700:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:79067-79158:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:78854-78982:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:78692-78777:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:78520-78624:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:77943-78058:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:77630-77685:-1:exon

CC2D1A
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: CC2D1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(81944..97759)
location: region:81944-97759:-1
so has part: feature:81944-97759:-1:exon
subclass of: SO_0000010

117009573
type: Gene
SIO_000068: ncbigene

position:81944:-1
position: 81944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97759:-1
position: 97759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81944-97759:-1:exon

CC2D1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CC2D1A
product: coiled-coil and C2 domain containing 1A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033083826.2
SIO_010081: CC2D1A
subclass of: SO_0000673
so part of: CC2D1A
location: complement(join(81944..82494,82583..82630,83315..83391,83481..83607,83693..83756,83924..83973,84054..84188,85130..85220,85658..85757,85831..85882,87632..87690,87774..87847,87922..88038,88149..88207,89947..90069,90159..90331,90402..90495,90582..90724,90808..90880,93899..94029,94110..94190,94278..94332,94421..94759,95143..95265,96668..96730,96813..96916,96995..97124,97234..97298,97607..97759))
location: region:81944-97759:-1
so has part: feature:97607-97759:-1:exon
so has part: feature:97234-97298:-1:exon
so has part: feature:96995-97124:-1:exon
so has part: feature:96813-96916:-1:exon
so has part: feature:96668-96730:-1:exon
so has part: feature:95143-95265:-1:exon
so has part: feature:94421-94759:-1:exon
so has part: feature:94278-94332:-1:exon
so has part: feature:94110-94190:-1:exon
so has part: feature:93899-94029:-1:exon
so has part: feature:90808-90880:-1:exon
so has part: feature:90582-90724:-1:exon
so has part: feature:90402-90495:-1:exon
so has part: feature:90159-90331:-1:exon
so has part: feature:89947-90069:-1:exon
so has part: feature:88149-88207:-1:exon
so has part: feature:87922-88038:-1:exon
so has part: feature:87774-87847:-1:exon
so has part: feature:87632-87690:-1:exon
so has part: feature:85831-85882:-1:exon
so has part: feature:85658-85757:-1:exon
so has part: feature:85130-85220:-1:exon
so has part: feature:84054-84188:-1:exon
so has part: feature:83924-83973:-1:exon
so has part: feature:83693-83756:-1:exon
so has part: feature:83481-83607:-1:exon
so has part: feature:83315-83391:-1:exon
so has part: feature:82583-82630:-1:exon
so has part: feature:81944-82494:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:97607-97759:-1:exon

position:97607:-1
position: 97607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:97234-97298:-1:exon

position:97234:-1
position: 97234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97298:-1
position: 97298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:96995-97124:-1:exon

position:96995:-1
position: 96995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97124:-1
position: 97124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:96813-96916:-1:exon

position:96813:-1
position: 96813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96916:-1
position: 96916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:96668-96730:-1:exon

position:96668:-1
position: 96668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96730:-1
position: 96730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:95143-95265:-1:exon

position:95143:-1
position: 95143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95265:-1
position: 95265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:94421-94759:-1:exon

position:94421:-1
position: 94421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94759:-1
position: 94759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:94278-94332:-1:exon

position:94278:-1
position: 94278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94332:-1
position: 94332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:94110-94190:-1:exon

position:94110:-1
position: 94110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94190:-1
position: 94190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:93899-94029:-1:exon

position:93899:-1
position: 93899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94029:-1
position: 94029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:90808-90880:-1:exon

position:90808:-1
position: 90808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90880:-1
position: 90880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:90582-90724:-1:exon

position:90582:-1
position: 90582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90724:-1
position: 90724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:90402-90495:-1:exon

position:90402:-1
position: 90402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90495:-1
position: 90495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:90159-90331:-1:exon

position:90159:-1
position: 90159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90331:-1
position: 90331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:89947-90069:-1:exon

position:89947:-1
position: 89947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90069:-1
position: 90069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:88149-88207:-1:exon

position:88149:-1
position: 88149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88207:-1
position: 88207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:87922-88038:-1:exon

position:87922:-1
position: 87922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88038:-1
position: 88038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:87774-87847:-1:exon

position:87774:-1
position: 87774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87847:-1
position: 87847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:87632-87690:-1:exon

position:87632:-1
position: 87632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87690:-1
position: 87690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:85831-85882:-1:exon

position:85831:-1
position: 85831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85882:-1
position: 85882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:85658-85757:-1:exon

position:85658:-1
position: 85658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85757:-1
position: 85757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:85130-85220:-1:exon

position:85130:-1
position: 85130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85220:-1
position: 85220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:84054-84188:-1:exon

position:84054:-1
position: 84054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84188:-1
position: 84188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:83924-83973:-1:exon

position:83924:-1
position: 83924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83973:-1
position: 83973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:83693-83756:-1:exon

position:83693:-1
position: 83693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83756:-1
position: 83756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:83481-83607:-1:exon

position:83481:-1
position: 83481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83607:-1
position: 83607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:83315-83391:-1:exon

position:83315:-1
position: 83315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83391:-1
position: 83391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:82583-82630:-1:exon

position:82583:-1
position: 82583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82630:-1
position: 82630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:81944-82494:-1:exon

position:82494:-1
position: 82494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CC2D1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CC2D1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil and C2 domain-containing protein 1A
translation: MSRARRVPGRGAAVARQMGLLADPGDGGGDGDGDAALEAELLLLLGGREAPDGGEPPPQQDLAAVEALAKLCLRDPPEEEEEEGEEDLENEEELLAELQEVLEEGSGNGGAAETPQEPAAAGALLAELSERAELYRAAIGSENGSGARLRRLQRGLKTLEQMLDSVRSGKPIDEAEIPPPVAVGKAGGAPGPPPPVSPAAPEQPPAPQTPPAPQTPPAPNPSPDPSPDPSPDPGSAPALRVRLQELQKEALAAKRRGDTAVALEHFRAAKRLEVQLEALGQGRAPPAPDPQPEEPKAPLPRDSPARDPPATSPATEAPRAPRDVREALEQRMERYRAAAAQAKDSGDGRKARMHERIVKQYQAALRAHSAGKAVDLSELPVPPGFPPIQGAEIPLEPSISGMLEAALKLAGPEQEEEEEEAEEEGNSKAAELQVQPSAPPAPPPKQPPPPRNSQPAPKPTGKAQQQLEFLELRRRQLAQAALRAKRRNDLEGAKLLLRRAKGIEGLIGAARGGLPVDIAQVPEVPLDGAEFELGPGQGRPLPPEAAKAFLQLAGALRKQHQMCLTYCRQFAQLGNISETTRCEALAEECRRHMETLRREHGRGAPPPKPRYEQRTFSVIKMFPELSSSDLELGIERGIGFPVPAGVTAADLDTFVRFEFPHPSAEEAQRDKTGVVKSTDCPEFRARFRLRLLRGHRGLRRLLSSRGIKFEVTQKGGLFRPERALGSAQLRLEGLEGACELREQLELLDGRRRTGGRLEVWVRIREPLGAQRQLEPRSERWLVLEPRAEPTVAVPKPSVAAPKDGSGRSAPTFPSLNLLLFDRERLERKMVPFGRAGRPVPPELRQQHQDLLRRIQGLRTRLQAGDPQFRKEYAEHLERHLRLYTEAARRLGTQGEREAAKEALYKRNLVESELQKLRG
SIO_010081: CC2D1A
subclass of: SO_0000673
so part of: CC2D1A
location: complement(join(82474..82494,82583..82630,83315..83391,83481..83607,83693..83756,83924..83973,84054..84188,85130..85220,85658..85757,85831..85882,87632..87690,87774..87847,87922..88038,88149..88207,89947..90069,90159..90331,90402..90495,90582..90724,90808..90880,93899..94029,94110..94190,94278..94332,94421..94759,95143..95265,96668..96730,96813..96916,96995..97124,97234..97284))
location: region:82474-97284:-1
so has part: feature:97234-97284:-1:exon
so has part: feature:96995-97124:-1:exon
so has part: feature:96813-96916:-1:exon
so has part: feature:96668-96730:-1:exon
so has part: feature:95143-95265:-1:exon
so has part: feature:94421-94759:-1:exon
so has part: feature:94278-94332:-1:exon
so has part: feature:94110-94190:-1:exon
so has part: feature:93899-94029:-1:exon
so has part: feature:90808-90880:-1:exon
so has part: feature:90582-90724:-1:exon
so has part: feature:90402-90495:-1:exon
so has part: feature:90159-90331:-1:exon
so has part: feature:89947-90069:-1:exon
so has part: feature:88149-88207:-1:exon
so has part: feature:87922-88038:-1:exon
so has part: feature:87774-87847:-1:exon
so has part: feature:87632-87690:-1:exon
so has part: feature:85831-85882:-1:exon
so has part: feature:85658-85757:-1:exon
so has part: feature:85130-85220:-1:exon
so has part: feature:84054-84188:-1:exon
so has part: feature:83924-83973:-1:exon
so has part: feature:83693-83756:-1:exon
so has part: feature:83481-83607:-1:exon
so has part: feature:83315-83391:-1:exon
so has part: feature:82583-82630:-1:exon
so has part: feature:82474-82494:-1:exon

XP_032939717.1
type: Protein
SIO_000068: ncbiprotein

position:82474:-1
position: 82474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97284:-1
position: 97284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97234-97284:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:96995-97124:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:96813-96916:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:96668-96730:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:95143-95265:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94421-94759:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:94278-94332:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:94110-94190:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:93899-94029:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:90808-90880:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:90582-90724:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:90402-90495:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:90159-90331:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:89947-90069:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:88149-88207:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:87922-88038:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:87774-87847:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:87632-87690:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:85831-85882:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:85658-85757:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:85130-85220:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:84054-84188:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:83924-83973:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:83693-83756:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:83481-83607:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:83315-83391:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:82583-82630:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:82474-82494:-1:exon

BRME1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: BRME1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 100244..103612
location: region:100244-103612:1
so has part: feature:100244-103612:1:exon
subclass of: SO_0000010

122149470
type: Gene
SIO_000068: ncbigene

position:100244:1
position: 100244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103612:1
position: 103612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100244-103612:1:exon

BRME1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: BRME1
product: break repair meiotic recombinase recruitment factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_042780100.1
SIO_010081: BRME1
subclass of: SO_0000673
so part of: BRME1
location: join(100244..100300,101416..101507,101598..101669,101747..103612)
location: region:100244-103612:1
so has part: feature:100244-100300:1:exon
so has part: feature:101416-101507:1:exon
so has part: feature:101598-101669:1:exon
so has part: feature:101747-103612:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:100244-100300:1:exon

position:100300:1
position: 100300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:101416-101507:1:exon

position:101416:1
position: 101416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101507:1
position: 101507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:101598-101669:1:exon

position:101598:1
position: 101598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101669:1
position: 101669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:101747-103612:1:exon

position:101747:1
position: 101747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BRME1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: BRME1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: break repair meiotic recombinase recruitment factor 1
translation: MVPESLGAAEGTQRAGIPRLQLFPRLQPWDTAGQTHTGSVGSSPAQARESARAAEPADASDIIRGLIRELSDLNRLAMGARRGLELLRRPKPRRGRRAVPGGSHWKEG
SIO_010081: BRME1
subclass of: SO_0000673
so part of: BRME1
location: join(100244..100300,101416..101507,101598..101669,101747..101852)
location: region:100244-101852:1
so has part: feature:100244-100300:1:exon
so has part: feature:101416-101507:1:exon
so has part: feature:101598-101669:1:exon
so has part: feature:101747-101852:1:exon

XP_042636034.1
type: Protein
SIO_000068: ncbiprotein

position:101852:1
position: 101852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100244-100300:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:101416-101507:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:101598-101669:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:101747-101852:1:exon

NANOS3
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: NANOS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(103638..113316)
location: region:103638-113316:-1
so has part: feature:103638-113316:-1:exon
subclass of: SO_0000010

117009429
type: Gene
SIO_000068: ncbigene

position:103638:-1
position: 103638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113316:-1
position: 113316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103638-113316:-1:exon

NANOS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NANOS3
product: nanos C2HC-type zinc finger 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033083665.1
SIO_010081: NANOS3
subclass of: SO_0000673
so part of: NANOS3
location: complement(join(103638..104090,104548..104994,111049..111193,113173..113316))
location: region:103638-113316:-1
so has part: feature:113173-113316:-1:exon
so has part: feature:111049-111193:-1:exon
so has part: feature:104548-104994:-1:exon
so has part: feature:103638-104090:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:113173-113316:-1:exon

position:113173:-1
position: 113173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:111049-111193:-1:exon

position:111049:-1
position: 111049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111193:-1
position: 111193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:104548-104994:-1:exon

position:104548:-1
position: 104548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104994:-1
position: 104994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:103638-104090:-1:exon

position:104090:-1
position: 104090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NANOS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: NANOS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nanos homolog 3
translation: MAAPGPPPPPGGRAGSGGIWRDPAALPAIAGHEATAAAPLPPPRNLPGRNHNASPLPRRQPCPTPRGPAPRPCPTAQPSPCSRGCPTAPPAPRTAPPPCAGPAPRVGPAPRARPAPRARPAPRARPAPRARPAPRARPAPRARPAPRARPVPCSFCQHNGEAPSMYESHSLRDAQGRLQCPVLRSYVCPQCGATQDQAHTRRFCPRTHRGYTSVYSRPARAGSAGRRQESPRK
SIO_010081: NANOS3
subclass of: SO_0000673
so part of: NANOS3
location: complement(join(104582..104994,111049..111193,113173..113316))
location: region:104582-113316:-1
so has part: feature:113173-113316:-1:exon
so has part: feature:111049-111193:-1:exon
so has part: feature:104582-104994:-1:exon

XP_032939556.1
type: Protein
SIO_000068: ncbiprotein

position:104582:-1
position: 104582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113173-113316:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111049-111193:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104582-104994:-1:exon

C33H19orf53
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: C33H19orf53
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(118795..119546)
location: region:118795-119546:-1
so has part: feature:118795-119546:-1:exon
subclass of: SO_0000010

117009552
type: Gene
SIO_000068: ncbigene

position:118795:-1
position: 118795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119546:-1
position: 119546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118795-119546:-1:exon

C33H19orf53
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: C33H19orf53
product: chromosome 33 C19orf53 homolog
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083797.2
SIO_010081: C33H19orf53
subclass of: SO_0000673
so part of: C33H19orf53
location: complement(join(118795..119028,119129..119184,119360..119546))
location: region:118795-119546:-1
so has part: feature:119360-119546:-1:exon
so has part: feature:119129-119184:-1:exon
so has part: feature:118795-119028:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:119360-119546:-1:exon

position:119360:-1
position: 119360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:119129-119184:-1:exon

position:119129:-1
position: 119129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119184:-1
position: 119184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:118795-119028:-1:exon

position:119028:-1
position: 119028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C33H19orf53
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: C33H19orf53
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leydig cell tumor 10 kDa protein homolog
translation: MAQGRPKAAAKRPKAAAAARGTRGPRKGGRTIAPKKLRVIQQQKLKKRLEVGIRMRIEQETVQRAQGSLPKKLALVTAPNKEKKAKKGRS
SIO_010081: C33H19orf53
subclass of: SO_0000673
so part of: C33H19orf53
location: complement(join(118897..119028,119129..119184,119360..119444))
location: region:118897-119444:-1
so has part: feature:119360-119444:-1:exon
so has part: feature:119129-119184:-1:exon
so has part: feature:118897-119028:-1:exon

XP_032939688.1
type: Protein
SIO_000068: ncbiprotein

position:118897:-1
position: 118897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119444:-1
position: 119444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119360-119444:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:119129-119184:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:118897-119028:-1:exon

MRI1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: MRI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(120718..124726)
location: region:120718-124726:-1
so has part: feature:120718-124726:-1:exon
subclass of: SO_0000010

117009526
type: Gene
SIO_000068: ncbigene

position:120718:-1
position: 120718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124726:-1
position: 124726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120718-124726:-1:exon

MRI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: MRI1
product: methylthioribose-1-phosphate isomerase 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083765.1
SIO_010081: MRI1
subclass of: SO_0000673
so part of: MRI1
location: complement(join(120718..120927,121167..121391,121518..121694,122582..122754,123425..123666,124542..124726))
location: region:120718-124726:-1
so has part: feature:124542-124726:-1:exon
so has part: feature:123425-123666:-1:exon
so has part: feature:122582-122754:-1:exon
so has part: feature:121518-121694:-1:exon
so has part: feature:121167-121391:-1:exon
so has part: feature:120718-120927:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:124542-124726:-1:exon

position:124542:-1
position: 124542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:123425-123666:-1:exon

position:123425:-1
position: 123425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123666:-1
position: 123666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:122582-122754:-1:exon

position:122582:-1
position: 122582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122754:-1
position: 122754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:121518-121694:-1:exon

position:121518:-1
position: 121518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121694:-1
position: 121694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:121167-121391:-1:exon

position:121167:-1
position: 121167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121391:-1
position: 121391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:120718-120927:-1:exon

position:120927:-1
position: 120927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MRI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: MRI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methylthioribose-1-phosphate isomerase
translation: MALESLRYRRGSLEVLNQRLLPGQLRYERVGGVERAWGAIRDMEVRGAPAIALLGCLSLAVELAGGAGPSEDLGALEEFVGQKLGFLLTARPTAANLGREAERLRAFVRQRVETPGVTPQQLRESIIEHIEGLLEKDRRDNRSIGAHGASHILGRVPGGGPVTLLTHCNTGTLATAGYGTALGVVRALHQRGSLSRVFCTETRPYNQGSRLSALELRHDGVPVTLIADSAAAAAMRERGVQAVVVGADRVTANGDVANKIGTFQLAVAARHMGIPFYVAAPSSTCDPTLASGRLIPIEERPGTELTQLGGVLLADPEVDVWNPSFDVTPHELITGGIITEWGVFAPSELCQALAERGEQ
SIO_010081: MRI1
subclass of: SO_0000673
so part of: MRI1
location: complement(join(120797..120927,121167..121391,121518..121694,122582..122754,123425..123666,124542..124673))
location: region:120797-124673:-1
so has part: feature:124542-124673:-1:exon
so has part: feature:123425-123666:-1:exon
so has part: feature:122582-122754:-1:exon
so has part: feature:121518-121694:-1:exon
so has part: feature:121167-121391:-1:exon
so has part: feature:120797-120927:-1:exon

XP_032939656.1
type: Protein
SIO_000068: ncbiprotein

position:120797:-1
position: 120797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124673:-1
position: 124673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124542-124673:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:123425-123666:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:122582-122754:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:121518-121694:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:121167-121391:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:120797-120927:-1:exon

YJU2B
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: YJU2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(124919..131071)
location: region:124919-131071:-1
so has part: feature:124919-131071:-1:exon
subclass of: SO_0000010

117009430
type: Gene
SIO_000068: ncbigene

position:124919:-1
position: 124919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131071:-1
position: 131071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124919-131071:-1:exon

YJU2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: YJU2B
product: YJU2 splicing factor homolog B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_033083666.1
SIO_010081: YJU2B
subclass of: SO_0000673
so part of: YJU2B
location: complement(join(124919..125322,125407..125545,125773..125945,127902..128044,128144..128204,128347..128402,128508..128590,129614..129667,130991..131071))
location: region:124919-131071:-1
so has part: feature:130991-131071:-1:exon
so has part: feature:129614-129667:-1:exon
so has part: feature:128508-128590:-1:exon
so has part: feature:128347-128402:-1:exon
so has part: feature:128144-128204:-1:exon
so has part: feature:127902-128044:-1:exon
so has part: feature:125773-125945:-1:exon
so has part: feature:125407-125545:-1:exon
so has part: feature:124919-125322:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:130991-131071:-1:exon

position:130991:-1
position: 130991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:129614-129667:-1:exon

position:129614:-1
position: 129614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129667:-1
position: 129667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:128508-128590:-1:exon

position:128508:-1
position: 128508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128590:-1
position: 128590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:128347-128402:-1:exon

position:128347:-1
position: 128347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128402:-1
position: 128402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:128144-128204:-1:exon

position:128144:-1
position: 128144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128204:-1
position: 128204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:127902-128044:-1:exon

position:127902:-1
position: 127902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128044:-1
position: 128044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:125773-125945:-1:exon

position:125773:-1
position: 125773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125945:-1
position: 125945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:125407-125545:-1:exon

position:125407:-1
position: 125407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125545:-1
position: 125545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:124919-125322:-1:exon

position:125322:-1
position: 125322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

YJU2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: YJU2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 130
translation: MGERKGTNKYYPPDFDPAKHGSLNKYHRSHPLRERARKLSQGILVIRFEMPFNIWCDGCQNHIGMGVRYNAEKKKVGSYYTTPVYRFRMKCHLCVNYIELQTDPGNCDYVIVSGARRKEERWEPGDSGQVLPNSAEQRERLALDPMFRLEHGVSDRGVLERAAPTLTRLQEAQHAWKDDFGLNSRLRRRFREEKKTLREEEEEAAALRARAGLSIPLLREEEEDRRLAALLSLRAPDSYEEKQRLKRSEISQRSWFSPGTARSPAGALQKLGLGAARTPKAPPGPPPTPAGLGIVRRRAGEEGGGAEGHRGTPQPGGAPQDPPGAAPQPGGAPPDPPEAAPQPGGAPQDPPGAAPAPSLVADYSDSGSESP
SIO_010081: YJU2B
subclass of: SO_0000673
so part of: YJU2B
location: complement(join(124919..125322,125407..125545,125773..125945,127902..128044,128144..128204,128347..128402,128508..128590,129614..129667,130991..130993))
location: region:124919-130993:-1
so has part: feature:130991-130993:-1:exon
so has part: feature:129614-129667:-1:exon
so has part: feature:128508-128590:-1:exon
so has part: feature:128347-128402:-1:exon
so has part: feature:128144-128204:-1:exon
so has part: feature:127902-128044:-1:exon
so has part: feature:125773-125945:-1:exon
so has part: feature:125407-125545:-1:exon
so has part: feature:124919-125322:-1:exon

XP_032939557.1
type: Protein
SIO_000068: ncbiprotein

position:130993:-1
position: 130993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130991-130993:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:129614-129667:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:128508-128590:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128347-128402:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:128144-128204:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:127902-128044:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:125773-125945:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:125407-125545:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:124919-125322:-1:exon

LOC117009431
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009431
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(131012..132872)
location: region:131012-132872:-1
so has part: feature:131012-132872:-1:exon
subclass of: SO_0000010

117009431
type: Gene
SIO_000068: ncbigene

position:131012:-1
position: 131012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132872:-1
position: 132872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131012-132872:-1:exon

LOC117009431
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009431
product: uncharacterized LOC117009431
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033083667.1
SIO_010081: LOC117009431
subclass of: SO_0000673
so part of: LOC117009431
location: complement(join(131012..131035,132069..132144,132236..132872))
location: region:131012-132872:-1
so has part: feature:132236-132872:-1:exon
so has part: feature:132069-132144:-1:exon
so has part: feature:131012-131035:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:132236-132872:-1:exon

position:132236:-1
position: 132236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:132069-132144:-1:exon

position:132069:-1
position: 132069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132144:-1
position: 132144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:131012-131035:-1:exon

position:131035:-1
position: 131035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009431
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009431
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117009431
translation: MESRCYEARCYGAGCQDPPRYGPRWLKPVAMETDAMNAVAMEPIAMGHPDAVHPVAMDPVAMDPVAMEPSLQCAPLLWKRVATDPRCYGAPVAMGCRKSPRCGAATRRERRREGRGRGEVSAPSPRLGQSARREERKGRGLGSAAGSGSWGAGGARERPRDGTGTEPGPNRDRTGTPGPNRDTGTDRDPGTEPGPNRDTGIEQGPRDGTGTPVLPVPVP
SIO_010081: LOC117009431
subclass of: SO_0000673
so part of: LOC117009431
location: complement(join(131012..131035,132069..132144,132236..132795))
location: region:131012-132795:-1
so has part: feature:132236-132795:-1:exon
so has part: feature:132069-132144:-1:exon
so has part: feature:131012-131035:-1:exon

XP_032939558.1
type: Protein
SIO_000068: ncbiprotein

position:132795:-1
position: 132795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132236-132795:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:132069-132144:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:131012-131035:-1:exon

CACNA1A
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: CACNA1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 139657..213492
location: region:139657-213492:1
so has part: feature:139657-213492:1:exon
subclass of: SO_0000010

117009513
type: Gene
SIO_000068: ncbigene

position:139657:1
position: 139657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213492:1
position: 213492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139657-213492:1:exon

CACNA1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CACNA1A
product: calcium voltage-gated channel subunit alpha1 A
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_033083753.2
SIO_010081: CACNA1A
subclass of: SO_0000673
so part of: CACNA1A
location: join(139657..140102,145825..145930,147019..147158,150769..150860,151802..151954,153323..153510,156921..157024,157101..157216,158367..158423,158549..158641,161740..161949,163924..164036,166720..166832,169588..169719,169811..169883,169977..170094,170184..170251,170345..170451,172253..172966,173054..173415,176568..176709,177508..177637,178820..178879,178959..179065,183782..183881,183967..184127,184197..184337,184413..184614,186124..186288,188638..188748,189425..189508,189603..189719,189805..189870,191080..191180,193084..193234,194866..194993,201783..201879,203700..203805,205000..205107,205188..205288,207116..207207,207291..207429,207511..207621,208062..208097,210546..210745,213096..213492)
location: region:139657-213492:1
so has part: feature:139657-140102:1:exon
so has part: feature:145825-145930:1:exon
so has part: feature:147019-147158:1:exon
so has part: feature:150769-150860:1:exon
so has part: feature:151802-151954:1:exon
so has part: feature:153323-153510:1:exon
so has part: feature:156921-157024:1:exon
so has part: feature:157101-157216:1:exon
so has part: feature:158367-158423:1:exon
so has part: feature:158549-158641:1:exon
so has part: feature:161740-161949:1:exon
so has part: feature:163924-164036:1:exon
so has part: feature:166720-166832:1:exon
so has part: feature:169588-169719:1:exon
so has part: feature:169811-169883:1:exon
so has part: feature:169977-170094:1:exon
so has part: feature:170184-170251:1:exon
so has part: feature:170345-170451:1:exon
so has part: feature:172253-172966:1:exon
so has part: feature:173054-173415:1:exon
so has part: feature:176568-176709:1:exon
so has part: feature:177508-177637:1:exon
so has part: feature:178820-178879:1:exon
so has part: feature:178959-179065:1:exon
so has part: feature:183782-183881:1:exon
so has part: feature:183967-184127:1:exon
so has part: feature:184197-184337:1:exon
so has part: feature:184413-184614:1:exon
so has part: feature:186124-186288:1:exon
so has part: feature:188638-188748:1:exon
so has part: feature:189425-189508:1:exon
so has part: feature:189603-189719:1:exon
so has part: feature:189805-189870:1:exon
so has part: feature:191080-191180:1:exon
so has part: feature:193084-193234:1:exon
so has part: feature:194866-194993:1:exon
so has part: feature:201783-201879:1:exon
so has part: feature:203700-203805:1:exon
so has part: feature:205000-205107:1:exon
so has part: feature:205188-205288:1:exon
so has part: feature:207116-207207:1:exon
so has part: feature:207291-207429:1:exon
so has part: feature:207511-207621:1:exon
so has part: feature:208062-208097:1:exon
so has part: feature:210546-210745:1:exon
so has part: feature:213096-213492:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:139657-140102:1:exon

position:140102:1
position: 140102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:145825-145930:1:exon

position:145825:1
position: 145825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145930:1
position: 145930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:147019-147158:1:exon

position:147019:1
position: 147019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147158:1
position: 147158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:150769-150860:1:exon

position:150769:1
position: 150769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150860:1
position: 150860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:151802-151954:1:exon

position:151802:1
position: 151802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151954:1
position: 151954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:153323-153510:1:exon

position:153323:1
position: 153323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153510:1
position: 153510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:156921-157024:1:exon

position:156921:1
position: 156921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157024:1
position: 157024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:157101-157216:1:exon

position:157101:1
position: 157101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157216:1
position: 157216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:158367-158423:1:exon

position:158367:1
position: 158367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158423:1
position: 158423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:158549-158641:1:exon

position:158549:1
position: 158549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158641:1
position: 158641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:161740-161949:1:exon

position:161740:1
position: 161740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161949:1
position: 161949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:163924-164036:1:exon

position:163924:1
position: 163924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164036:1
position: 164036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:166720-166832:1:exon

position:166720:1
position: 166720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166832:1
position: 166832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:169588-169719:1:exon

position:169588:1
position: 169588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169719:1
position: 169719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:169811-169883:1:exon

position:169811:1
position: 169811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169883:1
position: 169883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:169977-170094:1:exon

position:169977:1
position: 169977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170094:1
position: 170094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:170184-170251:1:exon

position:170184:1
position: 170184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170251:1
position: 170251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:170345-170451:1:exon

position:170345:1
position: 170345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170451:1
position: 170451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:172253-172966:1:exon

position:172253:1
position: 172253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172966:1
position: 172966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:173054-173415:1:exon

position:173054:1
position: 173054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173415:1
position: 173415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:176568-176709:1:exon

position:176568:1
position: 176568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176709:1
position: 176709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:177508-177637:1:exon

position:177508:1
position: 177508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177637:1
position: 177637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:178820-178879:1:exon

position:178820:1
position: 178820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178879:1
position: 178879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:178959-179065:1:exon

position:178959:1
position: 178959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179065:1
position: 179065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:183782-183881:1:exon

position:183782:1
position: 183782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183881:1
position: 183881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:183967-184127:1:exon

position:183967:1
position: 183967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184127:1
position: 184127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:184197-184337:1:exon

position:184197:1
position: 184197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184337:1
position: 184337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:184413-184614:1:exon

position:184413:1
position: 184413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184614:1
position: 184614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:186124-186288:1:exon

position:186124:1
position: 186124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186288:1
position: 186288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:188638-188748:1:exon

position:188638:1
position: 188638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188748:1
position: 188748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:189425-189508:1:exon

position:189425:1
position: 189425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189508:1
position: 189508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:189603-189719:1:exon

position:189603:1
position: 189603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189719:1
position: 189719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:189805-189870:1:exon

position:189805:1
position: 189805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189870:1
position: 189870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:191080-191180:1:exon

position:191080:1
position: 191080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191180:1
position: 191180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:193084-193234:1:exon

position:193084:1
position: 193084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193234:1
position: 193234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:194866-194993:1:exon

position:194866:1
position: 194866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194993:1
position: 194993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:201783-201879:1:exon

position:201783:1
position: 201783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201879:1
position: 201879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:203700-203805:1:exon

position:203700:1
position: 203700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203805:1
position: 203805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:205000-205107:1:exon

position:205000:1
position: 205000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205107:1
position: 205107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:205188-205288:1:exon

position:205188:1
position: 205188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205288:1
position: 205288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:207116-207207:1:exon

position:207116:1
position: 207116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207207:1
position: 207207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:207291-207429:1:exon

position:207291:1
position: 207291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207429:1
position: 207429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:207511-207621:1:exon

position:207511:1
position: 207511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207621:1
position: 207621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:208062-208097:1:exon

position:208062:1
position: 208062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208097:1
position: 208097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:210546-210745:1:exon

position:210546:1
position: 210546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210745:1
position: 210745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:213096-213492:1:exon

position:213096:1
position: 213096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CACNA1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CACNA1A
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: voltage-dependent P/Q-type calcium channel subunit alpha-1A
translation: MARFGEEVAARYGPGGGGGSGPGAAAGGRGAGGGPRQGPPGAQRLYKQSMAQRARTMALYNPIPVRQNCLTVNRSLFLFSEDNVVRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPDEDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILASVGSQFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIFAIIGLEFYMGKFHTTCFDLVTDEIKVEVPCGTDEPARICPNGTKCKKYWEGPNYGITQFDNILFAVLTVFQCITMEGWTDLLYYSNDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENRRAFLKLRRQQQIERELNGYMEWISKAEEVILAEDEPEAEPRRPFDGALRRATSKRSKTDLLSPEEGEEQLGDIAAMGSPFARASLRSAKLENATVFHRRERRVRFHIRRVVKTQAFYWTVLGLVALNTLCVAIVHYDQPDWLSDFLYYAEFIFLGLFMSEMFIKMYGLGTRPYFHSSFNCFDCAVIIGSIFEVIWAVVKPGTSFGISVLRALRLLRIFKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDDGTPPTNFDTFPAAIMTVFQILTGEDWNAVMYDGIKSQGGVKGGMVFSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEEEEAANQKLALQKAKEVAEVSPLSAANMSVSMKEQQKNQKSSKSVWEQRTSELRKQNLLASREALYSELDPEERWKVPYARHLRPDMKTHLDRPLVVDPQENRNNNTNKTRPGEPPPDPRFGPFRPEELRRQQPRYPEHGARPGEPPAPPGSRRPRSSSREPEREPSQERGYAEGERPKGRHRSRAASPPGEREHRRHRGHRRGPEEGEEGARPERRQRHREGGRPPRGEGDGEHGDGEQRRRRHRHGAPPGYDGEGRREDKERRHRRRREPQPPPPPPSGPTLSTTRPIQQDPARREPPVAEDIDNMKNNKLATGEPPAPPPVGNHTPCPLPSGPPRRPPPAANPPPPENSLGVTNPPNNPAKAGGKPEHTAVDIPPPFPPPPSNALVQVNRNANPEPLPRKEEEEKKEEEGAGQDENGPKPMVPYSSMFILSTTNPFRRLCHYIVNLRYFEMCILLVIAMSSIALAAEDPVQPNAPRNNVLRYFDYVFTGVFTFEMVIKMVDLGLVLHQGSYFRDLWNILDFIVVSGALVAFAFTGSSKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVVAVQLFKGKFFYCTDESKEFEKDCRGEYLVYEKDNEVKAQKREWKKYEFHYDNVLWALLTLFTVSTGEGWPQVLKHSVDATYENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEEYSLEKNERACIDFAISAKPLTRHMPQNRQSFQYRMWQFVVSPPFEYTIMAMIALNTIVLMMKFYDASDTYENVLKMFNNVFTSLFSLECLLKIMAFGVLNYFRDAWNIFDFVTVLGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIGIEEEDEESAITQHNNFRTFFQALMLLFRSATGEAWHEIMLSCLSGKPCDENSGIKEDECGNEFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRVWAEYDPAAWGRLTLADMYEMLRHMSPPLGLGASCPPRVAYKRLLRMDLPVADDNTVHFNSTLMALIRTALDIKIAKGGADKQQMDAELRKEMIAIWPNLSPKNLDLLVTPHKSTDLTVGKIYAAMMIMEYYRQSKAKKLQAMREEQNRTPLMFQRMEPPSPTQEGPPGPDTTPAVEPAARDGDMKESHSWVTQRAQEMFQRTGTWSPERGHPDDVPNSRPNSQLVEMREMPKDGHSDS…
SIO_010081: CACNA1A
subclass of: SO_0000673
so part of: CACNA1A
location: join(139816..140102,145825..145930,147019..147158,150769..150860,151802..151954,153323..153510,156921..157024,157101..157216,158367..158423,158549..158641,161740..161949,163924..164036,166720..166832,169588..169719,169811..169883,169977..170094,170184..170251,170345..170451,172253..172966,173054..173415,176568..176709,177508..177637,178820..178879,178959..179065,183782..183881,183967..184127,184197..184337,184413..184614,186124..186288,188638..188748,189425..189508,189603..189719,189805..189870,191080..191180,193084..193234,194866..194993,201783..201879,203700..203805,205000..205107,205188..205288,207116..207207,207291..207429,207511..207621,208062..208097,210546..210745,213096..213406)
location: region:139816-213406:1
so has part: feature:139816-140102:1:exon
so has part: feature:145825-145930:1:exon
so has part: feature:147019-147158:1:exon
so has part: feature:150769-150860:1:exon
so has part: feature:151802-151954:1:exon
so has part: feature:153323-153510:1:exon
so has part: feature:156921-157024:1:exon
so has part: feature:157101-157216:1:exon
so has part: feature:158367-158423:1:exon
so has part: feature:158549-158641:1:exon
so has part: feature:161740-161949:1:exon
so has part: feature:163924-164036:1:exon
so has part: feature:166720-166832:1:exon
so has part: feature:169588-169719:1:exon
so has part: feature:169811-169883:1:exon
so has part: feature:169977-170094:1:exon
so has part: feature:170184-170251:1:exon
so has part: feature:170345-170451:1:exon
so has part: feature:172253-172966:1:exon
so has part: feature:173054-173415:1:exon
so has part: feature:176568-176709:1:exon
so has part: feature:177508-177637:1:exon
so has part: feature:178820-178879:1:exon
so has part: feature:178959-179065:1:exon
so has part: feature:183782-183881:1:exon
so has part: feature:183967-184127:1:exon
so has part: feature:184197-184337:1:exon
so has part: feature:184413-184614:1:exon
so has part: feature:186124-186288:1:exon
so has part: feature:188638-188748:1:exon
so has part: feature:189425-189508:1:exon
so has part: feature:189603-189719:1:exon
so has part: feature:189805-189870:1:exon
so has part: feature:191080-191180:1:exon
so has part: feature:193084-193234:1:exon
so has part: feature:194866-194993:1:exon
so has part: feature:201783-201879:1:exon
so has part: feature:203700-203805:1:exon
so has part: feature:205000-205107:1:exon
so has part: feature:205188-205288:1:exon
so has part: feature:207116-207207:1:exon
so has part: feature:207291-207429:1:exon
so has part: feature:207511-207621:1:exon
so has part: feature:208062-208097:1:exon
so has part: feature:210546-210745:1:exon
so has part: feature:213096-213406:1:exon

XP_032939644.1
type: Protein
SIO_000068: ncbiprotein

position:139816:1
position: 139816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213406:1
position: 213406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139816-140102:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:145825-145930:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147019-147158:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:150769-150860:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:151802-151954:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:153323-153510:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:156921-157024:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:157101-157216:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:158367-158423:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:158549-158641:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:161740-161949:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:163924-164036:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:166720-166832:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:169588-169719:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:169811-169883:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:169977-170094:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:170184-170251:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:170345-170451:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:172253-172966:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:173054-173415:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:176568-176709:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:177508-177637:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:178820-178879:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:178959-179065:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:183782-183881:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:183967-184127:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:184197-184337:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:184413-184614:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:186124-186288:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:188638-188748:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:189425-189508:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:189603-189719:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:189805-189870:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:191080-191180:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:193084-193234:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:194866-194993:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:201783-201879:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:203700-203805:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:205000-205107:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:205188-205288:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:207116-207207:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:207291-207429:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:207511-207621:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:208062-208097:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:210546-210745:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:213096-213406:1:exon

IER2
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: IER2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(219456..220664)
location: region:219456-220664:-1
so has part: feature:219456-220664:-1:exon
subclass of: SO_0000010

117009433
type: Gene
SIO_000068: ncbigene

position:219456:-1
position: 219456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220664:-1
position: 220664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219456-220664:-1:exon

IER2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: IER2
product: immediate early response 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033083668.1
SIO_010081: IER2
subclass of: SO_0000673
so part of: IER2
location: complement(219456..220664)
location: region:219456-220664:-1
so has part: feature:219456-220664:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219456-220664:-1:exon

IER2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: IER2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: immediate early response gene 2 protein
translation: MEEAQRLLTVSVWKLYRCRFRRGGLRLHRSLQLSLLVRAARNRYLSARAAAETLPVPAPEPRRDPSGDTRNVPGPNEPNAESPNRASPGSERHRGNPQMDRTGLNPNRANLGSERERGNHAMDRTGESPNRASTGTGQERENPQMDRTGLNPNRASPGTGQERGNLQMDRTGENPNRASPGTGQERENHAMDWTGLNPNRASPGGERGNLQMDRTGLNPNRASPAGTGQERGNHAMDRTGESPNRASPGTGQERENPQMDWTGLNPNRASPGSERDRGNPPDRPTQIPPDPANRNRDPPSPPIPAPQPGPDPTNRNRDPPSAAPGPVRPAGAPRAGQKRRSSGSAGPGPGPVPSKRARLEAEAPPLPPGPPGRCSGPPAAAFGLLVRAVGAC
SIO_010081: IER2
subclass of: SO_0000673
so part of: IER2
location: complement(219456..220634)
location: region:219456-220634:-1
so has part: feature:219456-220634:-1:exon

XP_032939559.1
type: Protein
SIO_000068: ncbiprotein

position:220634:-1
position: 220634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219456-220634:-1:exon

NACC1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: NACC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(226432..238776)
location: region:226432-238776:-1
so has part: feature:226432-238776:-1:exon
subclass of: SO_0000010

117009516
type: Gene
SIO_000068: ncbigene

position:226432:-1
position: 226432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238776:-1
position: 238776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226432-238776:-1:exon

NACC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NACC1
product: nucleus accumbens associated 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033083756.1
SIO_010081: NACC1
subclass of: SO_0000673
so part of: NACC1
location: complement(join(226432..226726,230468..230565,230651..230756,232670..232846,234668..235620,238757..238776))
location: region:226432-238776:-1
so has part: feature:238757-238776:-1:exon
so has part: feature:234668-235620:-1:exon
so has part: feature:232670-232846:-1:exon
so has part: feature:230651-230756:-1:exon
so has part: feature:230468-230565:-1:exon
so has part: feature:226432-226726:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:238757-238776:-1:exon

position:238757:-1
position: 238757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:234668-235620:-1:exon

position:234668:-1
position: 234668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235620:-1
position: 235620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:232670-232846:-1:exon

position:232670:-1
position: 232670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232846:-1
position: 232846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:230651-230756:-1:exon

position:230651:-1
position: 230651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230756:-1
position: 230756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:230468-230565:-1:exon

position:230468:-1
position: 230468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230565:-1
position: 230565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:226432-226726:-1:exon

position:226726:-1
position: 226726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NACC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: NACC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleus accumbens-associated protein 1
translation: MAQTLQMEIPNFGNSILECLNEQRLQGLFCDVSVVVKGHAFKAHRAVLAASSSYFRDLFHSSKSAVVELPAAVQPQSFQQILSFCYTGRLSMNVGDQFLLMYTAGFLQIQEIMEKGTEFFLKVSSPSCDSQGLHGDDTPGSEPQSPVAAAQAAAQQQQQQQQQQQQQQQQQQQQQQGWALPLVSRVKTEQGEPDGVQCTFVVKRLWDGGSKDGGGGNGSRKMAKFSDAAPRPPGNANANAAGVVSAAVTPAASADQTSPGGTSSAYTSDSPGSFHNEEDEEEDAGEEGSDEQYRQICNMYTMYSMMNVGPAAAEKVEALPEQPPPEPRARARLRQDLASLPAELVTQIGNRCHPKLYDEGDPAEKLELVTGTNVYITRAQLMNCHVSAGTRHKVLLRRLLASFFDRNTLANSCGTGIRSSTNDPSRKPLDSRVLHAVKFYCQNFAPNFKESEMNAIAADMCTNARRVVRKSWIPKLKLLMAEGDSYTSFINDTGKLEPDVMGAEPPFEPGGAEPEGNPPAPGEGLQ
SIO_010081: NACC1
subclass of: SO_0000673
so part of: NACC1
location: complement(join(226461..226726,230468..230565,230651..230756,232670..232846,234668..235601))
location: region:226461-235601:-1
so has part: feature:234668-235601:-1:exon
so has part: feature:232670-232846:-1:exon
so has part: feature:230651-230756:-1:exon
so has part: feature:230468-230565:-1:exon
so has part: feature:226461-226726:-1:exon

XP_032939647.1
type: Protein
SIO_000068: ncbiprotein

position:226461:-1
position: 226461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235601:-1
position: 235601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234668-235601:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:232670-232846:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:230651-230756:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:230468-230565:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:226461-226726:-1:exon

TRMT1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: TRMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 238918..250194
location: region:238918-250194:1
so has part: feature:238918-250194:1:exon
subclass of: SO_0000010

117009562
type: Gene
SIO_000068: ncbigene

position:238918:1
position: 238918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250194:1
position: 250194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238918-250194:1:exon

TRMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: TRMT1
product: tRNA methyltransferase 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083807.1
SIO_010081: TRMT1
subclass of: SO_0000673
so part of: TRMT1
location: join(238918..238988,240191..240485,241537..241592,241698..241783,243002..243189,244735..244850,244929..245041,245116..245264,245699..245782,245913..245982,246468..246602,247533..247618,248636..248744,248848..248924,249032..249151,249363..249459,250126..250194)
location: region:238918-250194:1
so has part: feature:238918-238988:1:exon
so has part: feature:240191-240485:1:exon
so has part: feature:241537-241592:1:exon
so has part: feature:241698-241783:1:exon
so has part: feature:243002-243189:1:exon
so has part: feature:244735-244850:1:exon
so has part: feature:244929-245041:1:exon
so has part: feature:245116-245264:1:exon
so has part: feature:245699-245782:1:exon
so has part: feature:245913-245982:1:exon
so has part: feature:246468-246602:1:exon
so has part: feature:247533-247618:1:exon
so has part: feature:248636-248744:1:exon
so has part: feature:248848-248924:1:exon
so has part: feature:249032-249151:1:exon
so has part: feature:249363-249459:1:exon
so has part: feature:250126-250194:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:238918-238988:1:exon

position:238988:1
position: 238988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:240191-240485:1:exon

position:240191:1
position: 240191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240485:1
position: 240485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:241537-241592:1:exon

position:241537:1
position: 241537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241592:1
position: 241592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:241698-241783:1:exon

position:241698:1
position: 241698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241783:1
position: 241783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:243002-243189:1:exon

position:243002:1
position: 243002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243189:1
position: 243189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:244735-244850:1:exon

position:244735:1
position: 244735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244850:1
position: 244850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:244929-245041:1:exon

position:244929:1
position: 244929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245041:1
position: 245041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:245116-245264:1:exon

position:245116:1
position: 245116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245264:1
position: 245264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:245699-245782:1:exon

position:245699:1
position: 245699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245782:1
position: 245782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:245913-245982:1:exon

position:245913:1
position: 245913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245982:1
position: 245982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:246468-246602:1:exon

position:246468:1
position: 246468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246602:1
position: 246602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:247533-247618:1:exon

position:247533:1
position: 247533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247618:1
position: 247618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:248636-248744:1:exon

position:248636:1
position: 248636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248744:1
position: 248744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:248848-248924:1:exon

position:248848:1
position: 248848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248924:1
position: 248924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:249032-249151:1:exon

position:249032:1
position: 249032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249151:1
position: 249151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:249363-249459:1:exon

position:249363:1
position: 249363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249459:1
position: 249459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:250126-250194:1:exon

position:250126:1
position: 250126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: TRMT1
product: tRNA methyltransferase 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083806.2
SIO_010081: TRMT1
subclass of: SO_0000673
so part of: TRMT1
location: join(239671..239824,240191..240485,241537..241592,241698..241783,243002..243189,244735..244850,244929..245041,245116..245264,245699..245782,245913..245982,246468..246602,247533..247618,248636..248744,248848..248924,249032..249151,249363..249459,250126..250194)
location: region:239671-250194:1
so has part: feature:239671-239824:1:exon
so has part: feature:240191-240485:1:exon
so has part: feature:241537-241592:1:exon
so has part: feature:241698-241783:1:exon
so has part: feature:243002-243189:1:exon
so has part: feature:244735-244850:1:exon
so has part: feature:244929-245041:1:exon
so has part: feature:245116-245264:1:exon
so has part: feature:245699-245782:1:exon
so has part: feature:245913-245982:1:exon
so has part: feature:246468-246602:1:exon
so has part: feature:247533-247618:1:exon
so has part: feature:248636-248744:1:exon
so has part: feature:248848-248924:1:exon
so has part: feature:249032-249151:1:exon
so has part: feature:249363-249459:1:exon
so has part: feature:250126-250194:1:exon

position:239671:1
position: 239671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239671-239824:1:exon

position:239824:1
position: 239824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:240191-240485:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:241537-241592:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:241698-241783:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:243002-243189:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:244735-244850:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:244929-245041:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:245116-245264:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:245699-245782:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:245913-245982:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:246468-246602:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:247533-247618:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:248636-248744:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:248848-248924:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:249032-249151:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:249363-249459:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:250126-250194:1:exon

TRMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: TRMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (guanine(26)-N(2))-dimethyltransferase isoform X1
translation: MRGAARAAAALRTLCRSPPVMDGASHNGSAALEGSEGPPEGSEGPPGGSVGPPVGSEGPPEGSVGPPEGPPGPEESLITEGRATIVFPNANEVFYNPVQAFNRDLTCAVLTEFARLRLRPKGIRVVLPGEEEPEEPPEGGEPPRTARPGERCEGGLRVLEALAASGLRSVRFAREVPGLGAVLASDLSPRAAALMARNVALNGVGDTVTPRLADARMLMYQSRAERAPFDVIDLDPYGSPAPFLDAAVQAVSEGGLLCVTCTDMAVMAGNSAETCYSKYGAVSLKGRFCHEMALRIVLHSLDLRANCYQRFVVPLLSVSADFYIRVFVRVFSGQAKVKASASKQALVFHCVGCGSHRLQRLGRATSHGSGFKYSAATGPPVGPSCEFCQHRHQVGGPVWAEPLHDPPFVESLLAALERSPGRFGSEARMRGVLSVIQEELSDVPLYYTLDGLSSTIHSNTPSLLQLRSALLHAGFRVSLSHACRNAVKTDAPPAALWDIMRCWAKLHPVKLERLPESSPAARILSVEPTLQASFALHEDANPRSRQRGLKRFPENPEAFWGPKARARPGGSIAPSLQEKRERLQNKRSKQSKQFPSKRLKEDEQCCDSHEPPPASPH
SIO_010081: TRMT1
subclass of: SO_0000673
so part of: TRMT1
location: join(239803..239824,240191..240485,241537..241592,241698..241783,243002..243189,244735..244850,244929..245041,245116..245264,245699..245782,245913..245982,246468..246602,247533..247618,248636..248744,248848..248924,249032..249151,249363..249459,250126..250176)
location: region:239803-250176:1
so has part: feature:239803-239824:1:exon
so has part: feature:240191-240485:1:exon
so has part: feature:241537-241592:1:exon
so has part: feature:241698-241783:1:exon
so has part: feature:243002-243189:1:exon
so has part: feature:244735-244850:1:exon
so has part: feature:244929-245041:1:exon
so has part: feature:245116-245264:1:exon
so has part: feature:245699-245782:1:exon
so has part: feature:245913-245982:1:exon
so has part: feature:246468-246602:1:exon
so has part: feature:247533-247618:1:exon
so has part: feature:248636-248744:1:exon
so has part: feature:248848-248924:1:exon
so has part: feature:249032-249151:1:exon
so has part: feature:249363-249459:1:exon
so has part: feature:250126-250176:1:exon

XP_032939697.1
type: Protein
SIO_000068: ncbiprotein

position:239803:1
position: 239803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250176:1
position: 250176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239803-239824:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:240191-240485:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:241537-241592:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:241698-241783:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:243002-243189:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:244735-244850:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:244929-245041:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:245116-245264:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:245699-245782:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:245913-245982:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:246468-246602:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:247533-247618:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:248636-248744:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:248848-248924:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:249032-249151:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:249363-249459:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:250126-250176:1:exon

TRMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: TRMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (guanine(26)-N(2))-dimethyltransferase isoform X2
translation: MDGASHNGSAALEGSEGPPEGSEGPPGGSVGPPVGSEGPPEGSVGPPEGPPGPEESLITEGRATIVFPNANEVFYNPVQAFNRDLTCAVLTEFARLRLRPKGIRVVLPGEEEPEEPPEGGEPPRTARPGERCEGGLRVLEALAASGLRSVRFAREVPGLGAVLASDLSPRAAALMARNVALNGVGDTVTPRLADARMLMYQSRAERAPFDVIDLDPYGSPAPFLDAAVQAVSEGGLLCVTCTDMAVMAGNSAETCYSKYGAVSLKGRFCHEMALRIVLHSLDLRANCYQRFVVPLLSVSADFYIRVFVRVFSGQAKVKASASKQALVFHCVGCGSHRLQRLGRATSHGSGFKYSAATGPPVGPSCEFCQHRHQVGGPVWAEPLHDPPFVESLLAALERSPGRFGSEARMRGVLSVIQEELSDVPLYYTLDGLSSTIHSNTPSLLQLRSALLHAGFRVSLSHACRNAVKTDAPPAALWDIMRCWAKLHPVKLERLPESSPAARILSVEPTLQASFALHEDANPRSRQRGLKRFPENPEAFWGPKARARPGGSIAPSLQEKRERLQNKRSKQSKQFPSKRLKEDEQCCDSHEPPPASPH
SIO_010081: TRMT1
subclass of: SO_0000673
so part of: TRMT1
location: join(240229..240485,241537..241592,241698..241783,243002..243189,244735..244850,244929..245041,245116..245264,245699..245782,245913..245982,246468..246602,247533..247618,248636..248744,248848..248924,249032..249151,249363..249459,250126..250176)
location: region:240229-250176:1
so has part: feature:240229-240485:1:exon
so has part: feature:241537-241592:1:exon
so has part: feature:241698-241783:1:exon
so has part: feature:243002-243189:1:exon
so has part: feature:244735-244850:1:exon
so has part: feature:244929-245041:1:exon
so has part: feature:245116-245264:1:exon
so has part: feature:245699-245782:1:exon
so has part: feature:245913-245982:1:exon
so has part: feature:246468-246602:1:exon
so has part: feature:247533-247618:1:exon
so has part: feature:248636-248744:1:exon
so has part: feature:248848-248924:1:exon
so has part: feature:249032-249151:1:exon
so has part: feature:249363-249459:1:exon
so has part: feature:250126-250176:1:exon

XP_032939698.1
type: Protein
SIO_000068: ncbiprotein

position:240229:1
position: 240229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240229-240485:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:241537-241592:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:241698-241783:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:243002-243189:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:244735-244850:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:244929-245041:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:245116-245264:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:245699-245782:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:245913-245982:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:246468-246602:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:247533-247618:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:248636-248744:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:248848-248924:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:249032-249151:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:249363-249459:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:250126-250176:1:exon

MAN2B1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: MAN2B1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(250204..273781)
location: region:250204-273781:-1
so has part: feature:250204-273781:-1:exon
subclass of: SO_0000010

117009434
type: Gene
SIO_000068: ncbigene

position:250204:-1
position: 250204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273781:-1
position: 273781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250204-273781:-1:exon

MAN2B1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: MAN2B1
product: mannosidase alpha class 2B member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033083669.1
SIO_010081: MAN2B1
subclass of: SO_0000673
so part of: MAN2B1
location: complement(join(250204..250364,250448..250550,254933..255082,257090..257305,258409..258489,260100..260187,260274..260375,260461..260579,260650..260767,260841..260938,262614..262865,263769..263885,265086..265193,265278..265387,265490..265568,265650..265770,265846..265928,266016..266132,267244..267386,268093..268225,269724..269917,272876..273049,273250..273352,273703..273781))
location: region:250204-273781:-1
so has part: feature:273703-273781:-1:exon
so has part: feature:273250-273352:-1:exon
so has part: feature:272876-273049:-1:exon
so has part: feature:269724-269917:-1:exon
so has part: feature:268093-268225:-1:exon
so has part: feature:267244-267386:-1:exon
so has part: feature:266016-266132:-1:exon
so has part: feature:265846-265928:-1:exon
so has part: feature:265650-265770:-1:exon
so has part: feature:265490-265568:-1:exon
so has part: feature:265278-265387:-1:exon
so has part: feature:265086-265193:-1:exon
so has part: feature:263769-263885:-1:exon
so has part: feature:262614-262865:-1:exon
so has part: feature:260841-260938:-1:exon
so has part: feature:260650-260767:-1:exon
so has part: feature:260461-260579:-1:exon
so has part: feature:260274-260375:-1:exon
so has part: feature:260100-260187:-1:exon
so has part: feature:258409-258489:-1:exon
so has part: feature:257090-257305:-1:exon
so has part: feature:254933-255082:-1:exon
so has part: feature:250448-250550:-1:exon
so has part: feature:250204-250364:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:273703-273781:-1:exon

position:273703:-1
position: 273703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:273250-273352:-1:exon

position:273250:-1
position: 273250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273352:-1
position: 273352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:272876-273049:-1:exon

position:272876:-1
position: 272876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273049:-1
position: 273049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:269724-269917:-1:exon

position:269724:-1
position: 269724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269917:-1
position: 269917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:268093-268225:-1:exon

position:268093:-1
position: 268093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268225:-1
position: 268225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:267244-267386:-1:exon

position:267244:-1
position: 267244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267386:-1
position: 267386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:266016-266132:-1:exon

position:266016:-1
position: 266016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266132:-1
position: 266132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:265846-265928:-1:exon

position:265846:-1
position: 265846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265928:-1
position: 265928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:265650-265770:-1:exon

position:265650:-1
position: 265650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265770:-1
position: 265770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:265490-265568:-1:exon

position:265490:-1
position: 265490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265568:-1
position: 265568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:265278-265387:-1:exon

position:265278:-1
position: 265278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265387:-1
position: 265387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:265086-265193:-1:exon

position:265086:-1
position: 265086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265193:-1
position: 265193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:263769-263885:-1:exon

position:263769:-1
position: 263769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263885:-1
position: 263885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:262614-262865:-1:exon

position:262614:-1
position: 262614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262865:-1
position: 262865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:260841-260938:-1:exon

position:260841:-1
position: 260841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260938:-1
position: 260938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:260650-260767:-1:exon

position:260650:-1
position: 260650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260767:-1
position: 260767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:260461-260579:-1:exon

position:260461:-1
position: 260461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260579:-1
position: 260579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:260274-260375:-1:exon

position:260274:-1
position: 260274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260375:-1
position: 260375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:260100-260187:-1:exon

position:260100:-1
position: 260100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260187:-1
position: 260187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:258409-258489:-1:exon

position:258409:-1
position: 258409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258489:-1
position: 258489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:257090-257305:-1:exon

position:257090:-1
position: 257090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257305:-1
position: 257305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:254933-255082:-1:exon

position:254933:-1
position: 254933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255082:-1
position: 255082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:250448-250550:-1:exon

position:250448:-1
position: 250448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250550:-1
position: 250550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:250204-250364:-1:exon

position:250364:-1
position: 250364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MAN2B1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: MAN2B1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysosomal alpha-mannosidase
translation: MAVPGAAALPLLLLLSGTAAGCGYESCPPTRPDMLNVHLVPHTHDDVGWLKTVDQYYYGVRNQEQHAGVQYILDSVVAQLAAEPSRRFVYAEVAFLARWWQQQGEPTRRLVRRLVQEGRLEFVGGGWCMSDEAASHYGGLVEQQALGRALLRRLFGPCGTPRVAWQIDPFGHAREAAAAFAQMGYDGLFLGRVDHQDKWRRLQRRELEMVWRGSDSLEPPRADIFTGILPNMYNPPPGLCWDQLCSDPPVVDGDGPERNVDEVVTSFLQAAAAQARQYRTNHILMTMGSDFHYENAHLWFKNLDKLIAHTNARQANGSRVHALYSTPSCYLRELHRANLTWPLKTDDFFPYSDGPHQFWTGYFSSRPALKGYERLSSGFLQVCNQLEALAGPSARAGPYGPGDSSVLREAVAVAQHHDAVAGTERQHVANDYARQLAKGWDSCQVLVANALSLLGDTKDPLVFCNGLNVSVCPLSEATPQFTVILYNPLARAVSWPLRLPVSGASYAVSDPQGRPVASQVLPVSPVTRRLRGGAGGAPGELLFQAWAPPVGFSAFGVRQLRPGGGPDPPGGQQGQQGHQDTPGGHQDTPRGQQDSEELQIENEHLRVLADPGSGLLREIHNLRHGLSLPVSQSFYWYNASTGDGQSPQASGAYIFRPNASAPFPVSERAATRLVKTAVVQELHQIFSPWCSQVLRLRPGQPYLELEWTVGPLPVGDGLGKEVVSRFRTPLRTAGRFYTDSNGRQVLERRRDHRPTWNLSQSEPVAGNYYPVNTRIFIRDQKVQLTVLTDRSQGGSSVLDGSLELMVHRRLLRDDGRGLGEALDEPGVAGRGLAVRGRHLVLLDPAATAAEGHRPLAQEMATPPQVVLAAGAGPRLRQWSGLRRALPPNVHLLSLEPRGAGALLLRLEHLYGLGESRNRSTPVSVDLTTLFSSFNITSLEELALGGDVPLQGVSRLLWRTPSGTPKPRPEPRPDPRRVRLEPMEIRTFLASLRH
SIO_010081: MAN2B1
subclass of: SO_0000673
so part of: MAN2B1
location: complement(join(250267..250364,250448..250550,254933..255082,257090..257305,258409..258489,260100..260187,260274..260375,260461..260579,260650..260767,260841..260938,262614..262865,263769..263885,265086..265193,265278..265387,265490..265568,265650..265770,265846..265928,266016..266132,267244..267386,268093..268225,269724..269917,272876..273049,273250..273352,273703..273777))
location: region:250267-273777:-1
so has part: feature:273703-273777:-1:exon
so has part: feature:273250-273352:-1:exon
so has part: feature:272876-273049:-1:exon
so has part: feature:269724-269917:-1:exon
so has part: feature:268093-268225:-1:exon
so has part: feature:267244-267386:-1:exon
so has part: feature:266016-266132:-1:exon
so has part: feature:265846-265928:-1:exon
so has part: feature:265650-265770:-1:exon
so has part: feature:265490-265568:-1:exon
so has part: feature:265278-265387:-1:exon
so has part: feature:265086-265193:-1:exon
so has part: feature:263769-263885:-1:exon
so has part: feature:262614-262865:-1:exon
so has part: feature:260841-260938:-1:exon
so has part: feature:260650-260767:-1:exon
so has part: feature:260461-260579:-1:exon
so has part: feature:260274-260375:-1:exon
so has part: feature:260100-260187:-1:exon
so has part: feature:258409-258489:-1:exon
so has part: feature:257090-257305:-1:exon
so has part: feature:254933-255082:-1:exon
so has part: feature:250448-250550:-1:exon
so has part: feature:250267-250364:-1:exon

XP_032939560.1
type: Protein
SIO_000068: ncbiprotein

position:250267:-1
position: 250267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273777:-1
position: 273777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273703-273777:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:273250-273352:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:272876-273049:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269724-269917:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:268093-268225:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:267244-267386:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:266016-266132:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:265846-265928:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:265650-265770:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:265490-265568:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:265278-265387:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:265086-265193:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:263769-263885:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:262614-262865:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:260841-260938:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:260650-260767:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:260461-260579:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:260274-260375:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:260100-260187:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:258409-258489:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:257090-257305:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:254933-255082:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:250448-250550:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:250267-250364:-1:exon

WDR83OS
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: WDR83OS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(275392..278875)
location: region:275392-278875:-1
so has part: feature:275392-278875:-1:exon
subclass of: SO_0000010

117009553
type: Gene
SIO_000068: ncbigene

position:275392:-1
position: 275392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278875:-1
position: 278875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275392-278875:-1:exon

WDR83OS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: WDR83OS
product: WD repeat domain 83 opposite strand
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083798.2
SIO_010081: WDR83OS
subclass of: SO_0000673
so part of: WDR83OS
location: complement(join(275392..275505,275587..275684,278034..278139,278816..278875))
location: region:275392-278875:-1
so has part: feature:278816-278875:-1:exon
so has part: feature:278034-278139:-1:exon
so has part: feature:275587-275684:-1:exon
so has part: feature:275392-275505:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:278816-278875:-1:exon

position:278816:-1
position: 278816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:278034-278139:-1:exon

position:278034:-1
position: 278034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278139:-1
position: 278139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:275587-275684:-1:exon

position:275587:-1
position: 275587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275684:-1
position: 275684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:275392-275505:-1:exon

position:275505:-1
position: 275505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WDR83OS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: WDR83OS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PAT complex subunit Asterix
translation: MADPRRPGKVARYKPPATETNPALEDPTPDYMNLLGMVFSMCGLMLKLKWCAWIAVYCSFISFANSRSSEDTKQMMSSFMLSISAVVMSYLQNPQPMSPPW
SIO_010081: WDR83OS
subclass of: SO_0000673
so part of: WDR83OS
location: complement(join(275439..275505,275587..275684,278034..278139,278816..278850))
location: region:275439-278850:-1
so has part: feature:278816-278850:-1:exon
so has part: feature:278034-278139:-1:exon
so has part: feature:275587-275684:-1:exon
so has part: feature:275439-275505:-1:exon

XP_032939689.1
type: Protein
SIO_000068: ncbiprotein

position:275439:-1
position: 275439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278850:-1
position: 278850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278816-278850:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:278034-278139:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:275587-275684:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:275439-275505:-1:exon

WDR83
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: WDR83
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 278941..284136
location: region:278941-284136:1
so has part: feature:278941-284136:1:exon
subclass of: SO_0000010

117009530
type: Gene
SIO_000068: ncbigene

position:278941:1
position: 278941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284136:1
position: 284136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278941-284136:1:exon

WDR83
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: WDR83
product: WD repeat domain 83
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083770.1
SIO_010081: WDR83
subclass of: SO_0000673
so part of: WDR83
location: join(278941..279055,280595..280715,280787..280892,283054..283102,283203..283329,283415..283482,283570..283678,283758..283872,283944..284136)
location: region:278941-284136:1
so has part: feature:278941-279055:1:exon
so has part: feature:280595-280715:1:exon
so has part: feature:280787-280892:1:exon
so has part: feature:283054-283102:1:exon
so has part: feature:283203-283329:1:exon
so has part: feature:283415-283482:1:exon
so has part: feature:283570-283678:1:exon
so has part: feature:283758-283872:1:exon
so has part: feature:283944-284136:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:278941-279055:1:exon

position:279055:1
position: 279055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:280595-280715:1:exon

position:280595:1
position: 280595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280715:1
position: 280715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:280787-280892:1:exon

position:280787:1
position: 280787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280892:1
position: 280892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:283054-283102:1:exon

position:283054:1
position: 283054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283102:1
position: 283102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:283203-283329:1:exon

position:283203:1
position: 283203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283329:1
position: 283329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:283415-283482:1:exon

position:283415:1
position: 283415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283482:1
position: 283482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:283570-283678:1:exon

position:283570:1
position: 283570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283678:1
position: 283678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:283758-283872:1:exon

position:283758:1
position: 283758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283872:1
position: 283872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:283944-284136:1:exon

position:283944:1
position: 283944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WDR83
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: WDR83
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat domain-containing protein 83
translation: MAFPSPRPARPELPRQRVQTLQCGQGAVRAARFNADGNYCLTCGSDKTLKLWNPHKGTALRTYQGHGYEVLDAAGSFDNSQICSGGADKAVALWDVTTGQVVRKYRGHAGKVNCVQFNQESTVIVSGSIDSTVRCWDCRSRRPDPVQLLDEAKDGISSVKLSAHEILTGSVDGRVRRYDLRAGQLCSDYIGTPITSVCFSKDGQCVLAASLDSTLRLLDKDTGELLGEYTGHTSTTYRLDCVLNEQDTHVGCASEDGHVYFWDLLEGSLALSLPVGQGVVQSLAFHPRLSCLLVATQGQVTLWREDSFQPGGGDPDT
SIO_010081: WDR83
subclass of: SO_0000673
so part of: WDR83
location: join(278953..279055,280595..280715,280787..280892,283054..283102,283203..283329,283415..283482,283570..283678,283758..283872,283944..284099)
location: region:278953-284099:1
so has part: feature:278953-279055:1:exon
so has part: feature:280595-280715:1:exon
so has part: feature:280787-280892:1:exon
so has part: feature:283054-283102:1:exon
so has part: feature:283203-283329:1:exon
so has part: feature:283415-283482:1:exon
so has part: feature:283570-283678:1:exon
so has part: feature:283758-283872:1:exon
so has part: feature:283944-284099:1:exon

XP_032939661.1
type: Protein
SIO_000068: ncbiprotein

position:278953:1
position: 278953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284099:1
position: 284099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278953-279055:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:280595-280715:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:280787-280892:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283054-283102:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283203-283329:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:283415-283482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:283570-283678:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:283758-283872:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:283944-284099:1:exon

DHPS
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: DHPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(284990..289366)
location: region:284990-289366:-1
so has part: feature:284990-289366:-1:exon
subclass of: SO_0000010

117009435
type: Gene
SIO_000068: ncbigene

position:284990:-1
position: 284990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289366:-1
position: 289366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284990-289366:-1:exon

DHPS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: DHPS
product: deoxyhypusine synthase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033083670.1
SIO_010081: DHPS
subclass of: SO_0000673
so part of: DHPS
location: complement(join(284990..285109,285188..285313,285613..285716,285799..285904,285996..286082,287618..287714,287815..287936,288896..289057,289154..289366))
location: region:284990-289366:-1
so has part: feature:289154-289366:-1:exon
so has part: feature:288896-289057:-1:exon
so has part: feature:287815-287936:-1:exon
so has part: feature:287618-287714:-1:exon
so has part: feature:285996-286082:-1:exon
so has part: feature:285799-285904:-1:exon
so has part: feature:285613-285716:-1:exon
so has part: feature:285188-285313:-1:exon
so has part: feature:284990-285109:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:289154-289366:-1:exon

position:289154:-1
position: 289154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:288896-289057:-1:exon

position:288896:-1
position: 288896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289057:-1
position: 289057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:287815-287936:-1:exon

position:287815:-1
position: 287815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287936:-1
position: 287936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:287618-287714:-1:exon

position:287618:-1
position: 287618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287714:-1
position: 287714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:285996-286082:-1:exon

position:285996:-1
position: 285996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286082:-1
position: 286082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:285799-285904:-1:exon

position:285799:-1
position: 285799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285904:-1
position: 285904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:285613-285716:-1:exon

position:285613:-1
position: 285613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285716:-1
position: 285716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:285188-285313:-1:exon

position:285188:-1
position: 285188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285313:-1
position: 285313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:284990-285109:-1:exon

position:285109:-1
position: 285109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DHPS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: DHPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: deoxyhypusine synthase
translation: MAAPGEAPGEAPGEALRAVLRPSGALPAEALPVRGYDFSGGADHAALLRSFRTTGFQATSFAQAVAEIERMIAAKLEPLSAEQRERAAMAGPRPPSGCTIFLGFTSNLVSSGVRESIRYLVQHGMVDVLVTTAGGVEEDLIKCLAPTFIGDFQLRGRELRQSGINRIGNLLVPNDNYCKFEDWLMPILERMVDEQDTQGVRWTPSRMIARLGKEINNPESICYWAQKNQIPVLSPALTDGSLGDMIFFHSYKRPGLVLDIVEDLRLINTQAIFACKTGMIILGGGLVKHHIANANLMRNGADFSVYVNTAQEFDGSDSGARPDEAVSWGKIRVDATPVKVYADASLVFPLLVAETFARRAGAFVGTEGTPEPGGTPEG
SIO_010081: DHPS
subclass of: SO_0000673
so part of: DHPS
location: complement(join(284990..285109,285188..285313,285613..285716,285799..285904,285996..286082,287618..287714,287815..287936,288896..289057,289154..289366))
location: region:284990-289366:-1
so has part: feature:289154-289366:-1:exon
so has part: feature:288896-289057:-1:exon
so has part: feature:287815-287936:-1:exon
so has part: feature:287618-287714:-1:exon
so has part: feature:285996-286082:-1:exon
so has part: feature:285799-285904:-1:exon
so has part: feature:285613-285716:-1:exon
so has part: feature:285188-285313:-1:exon
so has part: feature:284990-285109:-1:exon

XP_032939561.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:289154-289366:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:288896-289057:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:287815-287936:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:287618-287714:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:285996-286082:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285799-285904:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285613-285716:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:285188-285313:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:284990-285109:-1:exon

FBXW9
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: FBXW9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(289579..291874)
location: region:289579-291874:-1
so has part: feature:289579-291874:-1:exon
subclass of: SO_0000010

117009436
type: Gene
SIO_000068: ncbigene

position:289579:-1
position: 289579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291874:-1
position: 291874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289579-291874:-1:exon

FBXW9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: FBXW9
product: F-box and WD repeat domain containing 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033083671.2
SIO_010081: FBXW9
subclass of: SO_0000673
so part of: FBXW9
location: complement(join(289579..289747,289823..289888,289983..290072,290162..290275,290361..290509,290590..290681,290759..290871,290970..291101,291189..291328,291625..291874))
location: region:289579-291874:-1
so has part: feature:291625-291874:-1:exon
so has part: feature:291189-291328:-1:exon
so has part: feature:290970-291101:-1:exon
so has part: feature:290759-290871:-1:exon
so has part: feature:290590-290681:-1:exon
so has part: feature:290361-290509:-1:exon
so has part: feature:290162-290275:-1:exon
so has part: feature:289983-290072:-1:exon
so has part: feature:289823-289888:-1:exon
so has part: feature:289579-289747:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:291625-291874:-1:exon

position:291625:-1
position: 291625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:291189-291328:-1:exon

position:291189:-1
position: 291189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291328:-1
position: 291328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:290970-291101:-1:exon

position:290970:-1
position: 290970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291101:-1
position: 291101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:290759-290871:-1:exon

position:290759:-1
position: 290759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290871:-1
position: 290871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:290590-290681:-1:exon

position:290590:-1
position: 290590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290681:-1
position: 290681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:290361-290509:-1:exon

position:290361:-1
position: 290361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290509:-1
position: 290509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:290162-290275:-1:exon

position:290162:-1
position: 290162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290275:-1
position: 290275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:289983-290072:-1:exon

position:289983:-1
position: 289983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290072:-1
position: 290072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:289823-289888:-1:exon

position:289823:-1
position: 289823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289888:-1
position: 289888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:289579-289747:-1:exon

position:289747:-1
position: 289747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FBXW9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: FBXW9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 9
translation: MDGPPAPASPAEPSGPAAGAGVALGLLALPPELLLRICGFLRARDVRRVLPRVCRALRDLARDAVAWRLRLQRRARRPLPVLPEDGFDWAAACEDLEEHLERWGAGGAPMEHFSLDEGHFASVDSVLLLQGGSLCVSGGRDRNVNLWDLRELGRGPPGKVLVKALGSGRSGTHKGWVWCLAARDTRVCSGSWDSTVKLWDLAAEGQQFGEIREKAAVLCLSYRPDVLVTGTYDKTVTVYDPRAGQAQVSSYKPHASAVLSLAADERLIVSGSEDRTLVVFDRRAGAVLQRLQLDNYLLSMSYRGSQLWAGDNQGRVYLFGSSGSGFQPARYFDVGHRLQITGLWHSVGSLYTTSTDRTLRIHVPTDPPRTICSWTHDDVLNGISVDGDVVAAASGGLSVEVWRLRT
SIO_010081: FBXW9
subclass of: SO_0000673
so part of: FBXW9
location: complement(join(289673..289747,289823..289888,289983..290072,290162..290275,290361..290509,290590..290681,290759..290871,290970..291101,291189..291328,291625..291874))
location: region:289673-291874:-1
so has part: feature:291625-291874:-1:exon
so has part: feature:291189-291328:-1:exon
so has part: feature:290970-291101:-1:exon
so has part: feature:290759-290871:-1:exon
so has part: feature:290590-290681:-1:exon
so has part: feature:290361-290509:-1:exon
so has part: feature:290162-290275:-1:exon
so has part: feature:289983-290072:-1:exon
so has part: feature:289823-289888:-1:exon
so has part: feature:289673-289747:-1:exon

XP_032939562.1
type: Protein
SIO_000068: ncbiprotein

position:289673:-1
position: 289673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291625-291874:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:291189-291328:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:290970-291101:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:290759-290871:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:290590-290681:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:290361-290509:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:290162-290275:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:289983-290072:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:289823-289888:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:289673-289747:-1:exon

TNPO2
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: TNPO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(292695..296041)
location: region:292695-296041:-1
so has part: feature:292695-296041:-1:exon
subclass of: SO_0000010

117009515
type: Gene
SIO_000068: ncbigene

position:292695:-1
position: 292695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296041:-1
position: 296041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292695-296041:-1:exon

TNPO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: TNPO2
product: transportin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033083755.1
SIO_010081: TNPO2
subclass of: SO_0000673
so part of: TNPO2
location: complement(join(292695..292806,292894..293025,293108..293182,294005..294104,295765..295840,295926..296041))
location: region:292695-296041:-1
so has part: feature:295926-296041:-1:exon
so has part: feature:295765-295840:-1:exon
so has part: feature:294005-294104:-1:exon
so has part: feature:293108-293182:-1:exon
so has part: feature:292894-293025:-1:exon
so has part: feature:292695-292806:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:295926-296041:-1:exon

position:295926:-1
position: 295926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:295765-295840:-1:exon

position:295765:-1
position: 295765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295840:-1
position: 295840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:294005-294104:-1:exon

position:294005:-1
position: 294005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294104:-1
position: 294104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:293108-293182:-1:exon

position:293108:-1
position: 293108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293182:-1
position: 293182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:292894-293025:-1:exon

position:292894:-1
position: 292894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293025:-1
position: 293025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:292695-292806:-1:exon

position:292806:-1
position: 292806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TNPO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: TNPO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transportin-2
translation: MQPYVPMVLNNLVEIINRPNTPKTLLENTAITIGRLGFVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICVMIGVNPGGVVQDFIFFCDAVASWVSPKDDLRDMFYKILHGFKAQVGEENWQQFSEQFPPLLKDRLAAFYGV
SIO_010081: TNPO2
subclass of: SO_0000673
so part of: TNPO2
location: complement(join(292918..293025,293108..293182,294005..294104,295765..295840,295926..296013))
location: region:292918-296013:-1
so has part: feature:295926-296013:-1:exon
so has part: feature:295765-295840:-1:exon
so has part: feature:294005-294104:-1:exon
so has part: feature:293108-293182:-1:exon
so has part: feature:292918-293025:-1:exon

XP_032939646.1
type: Protein
SIO_000068: ncbiprotein

position:292918:-1
position: 292918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296013:-1
position: 296013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295926-296013:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295765-295840:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:294005-294104:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:293108-293182:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:292918-293025:-1:exon

TRIR
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: TRIR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(296807..299677)
location: region:296807-299677:-1
so has part: feature:296807-299677:-1:exon
subclass of: SO_0000010

117009437
type: Gene
SIO_000068: ncbigene

position:296807:-1
position: 296807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299677:-1
position: 299677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296807-299677:-1:exon

TRIR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: TRIR
product: telomerase RNA component interacting RNase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033083672.1
SIO_010081: TRIR
subclass of: SO_0000673
so part of: TRIR
location: complement(join(296807..296825,299055..299137,299398..299677))
location: region:296807-299677:-1
so has part: feature:299398-299677:-1:exon
so has part: feature:299055-299137:-1:exon
so has part: feature:296807-296825:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:299398-299677:-1:exon

position:299398:-1
position: 299398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:299055-299137:-1:exon

position:299055:-1
position: 299055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299137:-1
position: 299137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:296807-296825:-1:exon

position:296825:-1
position: 296825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRIR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: TRIR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomerase RNA component interacting RNase
translation: MAARGEDREAPEAPSPPPPGPGGGVNVFANDGSFLELFKRKMEAEEQQREREAAAAAAEASGGGGGSTGLGPQRGADGAKRSGGALSFVGRRRGGNKLALKTGVVAKKQKTDEEVATFQNP
SIO_010081: TRIR
subclass of: SO_0000673
so part of: TRIR
location: complement(join(296807..296825,299055..299137,299398..299661))
location: region:296807-299661:-1
so has part: feature:299398-299661:-1:exon
so has part: feature:299055-299137:-1:exon
so has part: feature:296807-296825:-1:exon

XP_032939563.1
type: Protein
SIO_000068: ncbiprotein

position:299661:-1
position: 299661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299398-299661:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:299055-299137:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:296807-296825:-1:exon

GET3
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: GET3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 299893..313365
location: region:299893-313365:1
so has part: feature:299893-313365:1:exon
subclass of: SO_0000010

117009514
type: Gene
SIO_000068: ncbigene

position:299893:1
position: 299893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313365:1
position: 313365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299893-313365:1:exon

GET3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: GET3
product: guided entry of tail-anchored proteins factor 3, ATPase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_033083754.1
SIO_010081: GET3
subclass of: SO_0000673
so part of: GET3
location: join(299893..300074,301380..301527,301600..301748,304337..304487,307661..307768,311123..311320,313211..313365)
location: region:299893-313365:1
so has part: feature:299893-300074:1:exon
so has part: feature:301380-301527:1:exon
so has part: feature:301600-301748:1:exon
so has part: feature:304337-304487:1:exon
so has part: feature:307661-307768:1:exon
so has part: feature:311123-311320:1:exon
so has part: feature:313211-313365:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:299893-300074:1:exon

position:300074:1
position: 300074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:301380-301527:1:exon

position:301380:1
position: 301380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301527:1
position: 301527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:301600-301748:1:exon

position:301600:1
position: 301600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301748:1
position: 301748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:304337-304487:1:exon

position:304337:1
position: 304337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304487:1
position: 304487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:307661-307768:1:exon

position:307661:1
position: 307661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307768:1
position: 307768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:311123-311320:1:exon

position:311123:1
position: 311123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311320:1
position: 311320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:313211-313365:1:exon

position:313211:1
position: 313211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GET3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: GET3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATPase GET3
translation: MAAAAAGGWASEAPEEFEDAPDVEPLEPTLANIIEQRSLKWIFVGGKGGVGKTTCSCSLAVQLSRVRESVLIISTDPAHNISDAFDQKFSKVPTKVTGYDNLFAMEIDPSLGVAELPDEFFEEDNVLSMGKKMMQEAMSAFPGIDEAMSYAEVMRLVKGMNFSVVVFDTAPTGHTLRLLNFPTIVERGLGRLMQIKNQISPFISQMCNMLGLGDMNADQLASKLEETLPVIRSVSEQFKDPEQTTFICVCIAEFLSLYETERLIQELAKCRIDTHNIVVNQLVFPDPLRPCRMCEARHKIQAKYLDQMEDLYEDFHIVKLPLLPHEVRGGDKVNTFSSLLLDPYQPPSPK
SIO_010081: GET3
subclass of: SO_0000673
so part of: GET3
location: join(299908..300074,301380..301527,301600..301748,304337..304487,307661..307768,311123..311320,313211..313342)
location: region:299908-313342:1
so has part: feature:299908-300074:1:exon
so has part: feature:301380-301527:1:exon
so has part: feature:301600-301748:1:exon
so has part: feature:304337-304487:1:exon
so has part: feature:307661-307768:1:exon
so has part: feature:311123-311320:1:exon
so has part: feature:313211-313342:1:exon

XP_032939645.1
type: Protein
SIO_000068: ncbiprotein

position:299908:1
position: 299908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313342:1
position: 313342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299908-300074:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301380-301527:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:301600-301748:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:304337-304487:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:307661-307768:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:311123-311320:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:313211-313342:1:exon

BEST2
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: BEST2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 319087..335249
location: region:319087-335249:1
so has part: feature:319087-335249:1:exon
subclass of: SO_0000010

117009438
type: Gene
SIO_000068: ncbigene

position:319087:1
position: 319087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335249:1
position: 335249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319087-335249:1:exon

BEST2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: BEST2
product: bestrophin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 59% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033083673.1
SIO_010081: BEST2
subclass of: SO_0000673
so part of: BEST2
location: join(319087..319306,322718..322812,324339..324572,326616..326770,328246..328323,330775..330927,331038..331118,332255..332406,335057..335249)
location: region:319087-335249:1
so has part: feature:319087-319306:1:exon
so has part: feature:322718-322812:1:exon
so has part: feature:324339-324572:1:exon
so has part: feature:326616-326770:1:exon
so has part: feature:328246-328323:1:exon
so has part: feature:330775-330927:1:exon
so has part: feature:331038-331118:1:exon
so has part: feature:332255-332406:1:exon
so has part: feature:335057-335249:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:319087-319306:1:exon

position:319306:1
position: 319306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:322718-322812:1:exon

position:322718:1
position: 322718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322812:1
position: 322812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:324339-324572:1:exon

position:324339:1
position: 324339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324572:1
position: 324572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:326616-326770:1:exon

position:326616:1
position: 326616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326770:1
position: 326770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:328246-328323:1:exon

position:328246:1
position: 328246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328323:1
position: 328323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:330775-330927:1:exon

position:330775:1
position: 330775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330927:1
position: 330927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:331038-331118:1:exon

position:331038:1
position: 331038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331118:1
position: 331118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:332255-332406:1:exon

position:332255:1
position: 332255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332406:1
position: 332406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:335057-335249:1:exon

position:335057:1
position: 335057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BEST2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: BEST2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bestrophin-2
translation: MTVTYTSRVATARFGGFSQLLLLWRGSIYKLLYRELLLFLAAYLGLSLAYRFLLSEAQRRLFEKLALYCDKSANLIPVSFVLGFYVALVLERWWGQFRTVPAPDGLMVAVAGSVHGADARGRLLRRTLLRYGSLAALLVLRAVSTPVYKRFPTTDHLVQAGFLTREERRRLEGLRSPYNKFWVPCAWFGALAGQARREGRVRDDCALKLLMEELNRFRAHCSLLFHYDWISVPLVYTQVVTIAVYTFFLTCLIGRQFLDPAQGYAGHELDLGVPVFTLLQFFFYVGWLKVAEQLINPFGEDDDDFETNTLIDRNFQVSMLAVDELYGQVPSLERDRYWDSACAQAPYTAAAPRQRQPAFRGSAFDVTLAKEEMQFQPLEDIGDPLGDPLDPPIPPPKSSSEGGGGGPETPPGFGDPQERWLLHPSAEHAV
SIO_010081: BEST2
subclass of: SO_0000673
so part of: BEST2
location: join(319155..319306,322718..322812,324339..324572,326616..326770,328246..328323,330775..330927,331038..331118,332255..332406,335057..335249)
location: region:319155-335249:1
so has part: feature:319155-319306:1:exon
so has part: feature:322718-322812:1:exon
so has part: feature:324339-324572:1:exon
so has part: feature:326616-326770:1:exon
so has part: feature:328246-328323:1:exon
so has part: feature:330775-330927:1:exon
so has part: feature:331038-331118:1:exon
so has part: feature:332255-332406:1:exon
so has part: feature:335057-335249:1:exon

XP_032939564.1
type: Protein
SIO_000068: ncbiprotein

position:319155:1
position: 319155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319155-319306:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322718-322812:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:324339-324572:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:326616-326770:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:328246-328323:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:330775-330927:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:331038-331118:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:332255-332406:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:335057-335249:1:exon

TIMM29
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: TIMM29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(338972..341800)
location: region:338972-341800:-1
so has part: feature:338972-341800:-1:exon
subclass of: SO_0000010

117009539
type: Gene
SIO_000068: ncbigene

position:338972:-1
position: 338972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341800:-1
position: 341800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338972-341800:-1:exon

TIMM29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: TIMM29
product: translocase of inner mitochondrial membrane 29
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033083783.1
SIO_010081: TIMM29
subclass of: SO_0000673
so part of: TIMM29
location: complement(join(338972..339903,341717..341800))
location: region:338972-341800:-1
so has part: feature:341717-341800:-1:exon
so has part: feature:338972-339903:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:341717-341800:-1:exon

position:341717:-1
position: 341717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:338972-339903:-1:exon

position:339903:-1
position: 339903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TIMM29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: TIMM29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial import inner membrane translocase subunit Tim29
translation: MAAAAAAAAGTGRGLWGRLRDTRLARWTHSLLQDYSSSLQDAASEARRRPALTAATLLTLGLGASLASTVPDLDSLESAAVAAGTELGQLPPSSRSPRSERHVLRLLRLRERGRIRVRNLGLVAVATAEPHGSDPALYSARCPHLRPRWGLGEVLDVGVWGRWWLLRDALRDCDINEEEFGHLPERLRGMERRQLRSEHNERLHRERLRPVGLGERG
SIO_010081: TIMM29
subclass of: SO_0000673
so part of: TIMM29
location: complement(join(339323..339903,341717..341789))
location: region:339323-341789:-1
so has part: feature:341717-341789:-1:exon
so has part: feature:339323-339903:-1:exon

XP_032939674.1
type: Protein
SIO_000068: ncbiprotein

position:339323:-1
position: 339323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341789:-1
position: 341789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:341717-341789:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:339323-339903:-1:exon

KEAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: KEAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(352494..367748)
location: region:352494-367748:-1
so has part: feature:352494-367748:-1:exon
subclass of: SO_0000010

117009440
type: Gene
SIO_000068: ncbigene

position:352494:-1
position: 352494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367748:-1
position: 367748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352494-367748:-1:exon

KEAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: KEAP1
product: kelch like ECH associated protein 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 6 bases in 5 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033083674.1
SIO_010081: KEAP1
subclass of: SO_0000673
so part of: KEAP1
location: complement(join(352494..352692,355229..355406,357583..357788,359019..359689,359933..360020,360870..360957,362700..363117,365958..365985,367636..367748))
location: region:352494-367748:-1
so has part: feature:367636-367748:-1:exon
so has part: feature:365958-365985:-1:exon
so has part: feature:362700-363117:-1:exon
so has part: feature:360870-360957:-1:exon
so has part: feature:359933-360020:-1:exon
so has part: feature:359019-359689:-1:exon
so has part: feature:357583-357788:-1:exon
so has part: feature:355229-355406:-1:exon
so has part: feature:352494-352692:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:367636-367748:-1:exon

position:367636:-1
position: 367636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:365958-365985:-1:exon

position:365958:-1
position: 365958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365985:-1
position: 365985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:362700-363117:-1:exon

position:362700:-1
position: 362700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363117:-1
position: 363117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:360870-360957:-1:exon

position:360870:-1
position: 360870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360957:-1
position: 360957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:359933-360020:-1:exon

position:359933:-1
position: 359933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360020:-1
position: 360020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:359019-359689:-1:exon

position:359019:-1
position: 359019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359689:-1
position: 359689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:357583-357788:-1:exon

position:357583:-1
position: 357583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357788:-1
position: 357788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:355229-355406:-1:exon

position:355229:-1
position: 355229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355406:-1
position: 355406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:352494-352692:-1:exon

position:352692:-1
position: 352692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KEAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: KEAP1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 6 bases in 5 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(360011..360013),aa:OTHER)
product: LOW QUALITY PROTEIN: kelch-like ECH-associated protein 1
translation: MAAEAARGGAGPRRGRGHSEGAWSQRGGVANTEGAGSLPAPGPRRGPPHHHHVSPLSTPPALPAEISPSPGSTSRLFSLPDHPASALATMNDLRLRGELCDVTLRVRHGRDAAPTELRAHRLVLAAASPVFRAMFTAGLREKGLEEVPIEGVHPGXHGGLVEFAYTAAVAVGERCVLSLLHGALMYQVDAVVKACCSFLAXQLHPSNAIGIAALAEREFXGDPPECLGCLELQEKAREYIYMNFAEVSKQEEFLXLSHCQLAALLSRDELNVRSESEVFQACLAWVHQHRESRAPFLPALLRAVRCHALTPRFLXRQLRRDLGRDALRYLAEVFRDLALHRPSGDPPGRTPKVKQLIYAAGGYLRRSLSTLEAFDPVCGSWVRLAEMETPRSGLAGCAVXGLFYAVGGRNNSPEGNTDSAAVDCYNPVSGRWSPCAPMSVPRNRIGVGVIDGLIYAVGGSHGCNHHCSVERYEPERDEWALVAPMGTRRIGVGVAVLNRLLYAVGGFDGSARLSSAERYHPERDSWQPIPPMATVRSGAGVCALGNCLYAMGGYDGSQQLSSTERFRADTETWSFVAPMGHRRSALGVTAFRGKIYVLGGATGHSFLDSVECYDPESDAWTEVAPMPSGRSGLGVAVTMEPCPPQSPPEDGETPPGGPC
SIO_010081: KEAP1
subclass of: SO_0000673
so part of: KEAP1
location: complement(join(352509..352692,355229..355406,357583..357788,359019..359689,359933..360020,360870..360957,362700..363117,365958..365985,367636..367748))
location: region:352509-367748:-1
so has part: feature:367636-367748:-1:exon
so has part: feature:365958-365985:-1:exon
so has part: feature:362700-363117:-1:exon
so has part: feature:360870-360957:-1:exon
so has part: feature:359933-360020:-1:exon
so has part: feature:359019-359689:-1:exon
so has part: feature:357583-357788:-1:exon
so has part: feature:355229-355406:-1:exon
so has part: feature:352509-352692:-1:exon

XP_032939565.1
type: Protein
SIO_000068: ncbiprotein

position:352509:-1
position: 352509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367636-367748:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:365958-365985:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:362700-363117:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:360870-360957:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:359933-360020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:359019-359689:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:357583-357788:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:355229-355406:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:352509-352692:-1:exon

ATG4D
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: ATG4D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 367747..376093
location: region:367747-376093:1
so has part: feature:367747-376093:1:exon
subclass of: SO_0000010

117009441
type: Gene
SIO_000068: ncbigene

position:367747:1
position: 367747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376093:1
position: 376093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367747-376093:1:exon

ATG4D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ATG4D
product: autophagy related 4D cysteine peptidase
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033083675.1
SIO_010081: ATG4D
subclass of: SO_0000673
so part of: ATG4D
location: join(367747..367904,369260..369344,370113..370250,370521..370934,371735..372468,372581..372928,373011..373075,373151..373246,373288..373385,375048..375136,375217..375291,375560..375650,376032..376093)
location: region:367747-376093:1
so has part: feature:367747-367904:1:exon
so has part: feature:369260-369344:1:exon
so has part: feature:370113-370250:1:exon
so has part: feature:370521-370934:1:exon
so has part: feature:371735-372468:1:exon
so has part: feature:372581-372928:1:exon
so has part: feature:373011-373075:1:exon
so has part: feature:373151-373246:1:exon
so has part: feature:373288-373385:1:exon
so has part: feature:375048-375136:1:exon
so has part: feature:375217-375291:1:exon
so has part: feature:375560-375650:1:exon
so has part: feature:376032-376093:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:367747-367904:1:exon

position:367904:1
position: 367904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:369260-369344:1:exon

position:369260:1
position: 369260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369344:1
position: 369344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:370113-370250:1:exon

position:370113:1
position: 370113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370250:1
position: 370250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:370521-370934:1:exon

position:370521:1
position: 370521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370934:1
position: 370934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:371735-372468:1:exon

position:371735:1
position: 371735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372468:1
position: 372468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:372581-372928:1:exon

position:372581:1
position: 372581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372928:1
position: 372928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:373011-373075:1:exon

position:373011:1
position: 373011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373075:1
position: 373075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:373151-373246:1:exon

position:373151:1
position: 373151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373246:1
position: 373246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:373288-373385:1:exon

position:373288:1
position: 373288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373385:1
position: 373385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:375048-375136:1:exon

position:375048:1
position: 375048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375136:1
position: 375136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:375217-375291:1:exon

position:375217:1
position: 375217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375291:1
position: 375291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:375560-375650:1:exon

position:375560:1
position: 375560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375650:1
position: 375650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:376032-376093:1:exon

position:376032:1
position: 376032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATG4D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ATG4D
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: cysteine protease ATG4D
translation: MSRGGRDRTPPGTEPAPEPGPAPGPAPGPPPGAERGGQRVRGRVLAAWNSVKYGWTLRPRPHFSPRDPLHLLGRVYEPGNGEELARFRWDFCSRLWLTNRRGLGAVSGSGGSLWVWGLSLGLGAVPGLWVWGLSVGLGSIPGVSHSPSPPEELARFRWDFCSRLWLTYRRGLGAVPGSGGCPWVWGLSVGLGSIPGVSHIPLPPEELARFRWDFCSRLWLTYRRGFPALPGPRTPRTTDCGWGCTLRSAQMLLGQGLLLHLLGRDWLWPGALLELEPGGSRRSRDPPGRARPPRDGHGTPRTGTGTPQDGHRDPQNGHWDPRAAAGPPGMFPGQPRMDETPQNGQGPPRVGSGPPRMDSGTPQDGHGVLKRDSDPLGQPRDPSGWVQDPSGRPQDPSGRPQDPSGRAQDPWDGPKTSRDGLRTPWDSSRTPGTPPRPPGTAPGPPGTPPGLLGTTPGPLGQPRDPLGQLQDPSGWAQDPSGQPRTPRDAPKTSRDAPRTSRTTPGPPETDPSGRPQDPPGQPRDPSGQPRDPSGWAGTPWNNPRTPRDTSRTPQDAPRTPHRTQPLPGAPRAPRDTERWHRAIVSWFSDHPRAPFGIHRLVELGREFGKKAGDWFGPAIAAHLLRGAVESCTETPGLAVYVAQDCTVYKGDVARLVRGDSDGGTAGPEHRDHREHRDQGLGSPGQRRGLVLLVPARLGGENLNPVYVECVKELLQLRSCLGIIGGXPRHSLFFLGFQGTDPVIPCLPGPHLCQPCVDTTRENFPLQVLTPPSGGERYPIFTLAEGLAQDQTLDPPREGSDDFPEILEFSQQVLEFS
SIO_010081: ATG4D
subclass of: SO_0000673
so part of: ATG4D
location: join(367747..367904,369260..369344,370113..370250,370521..370934,371735..372468,372581..372928,373011..373075,373151..373246,373288..373385,375048..375136,375217..375291,375560..375650,376032..376093)
location: region:367747-376093:1
so has part: feature:367747-367904:1:exon
so has part: feature:369260-369344:1:exon
so has part: feature:370113-370250:1:exon
so has part: feature:370521-370934:1:exon
so has part: feature:371735-372468:1:exon
so has part: feature:372581-372928:1:exon
so has part: feature:373011-373075:1:exon
so has part: feature:373151-373246:1:exon
so has part: feature:373288-373385:1:exon
so has part: feature:375048-375136:1:exon
so has part: feature:375217-375291:1:exon
so has part: feature:375560-375650:1:exon
so has part: feature:376032-376093:1:exon

XP_032939566.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:367747-367904:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:369260-369344:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370113-370250:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:370521-370934:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:371735-372468:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:372581-372928:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:373011-373075:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:373151-373246:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:373288-373385:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:375048-375136:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:375217-375291:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:375560-375650:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:376032-376093:1:exon

KRI1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: KRI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(376714..384512)
location: region:376714-384512:-1
so has part: feature:376714-384512:-1:exon
subclass of: SO_0000010

117009442
type: Gene
SIO_000068: ncbigene

position:376714:-1
position: 376714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384512:-1
position: 384512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376714-384512:-1:exon

KRI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: KRI1
product: KRI1 homolog
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 5 bases in 4 codons
transcript id: XM_033083676.1
SIO_010081: KRI1
subclass of: SO_0000673
so part of: KRI1
location: complement(join(376714..377368,377419..377510,377590..377669,377754..377862,378841..378987,379698..379874,379966..380041,380119..380288,380359..380454,381540..381649,381696..381829,381925..381999,382071..382134,382303..382349,382430..382487,382858..382962,383045..383150,383227..383291,384328..384360,384455..384512))
location: region:376714-384512:-1
so has part: feature:384455-384512:-1:exon
so has part: feature:384328-384360:-1:exon
so has part: feature:383227-383291:-1:exon
so has part: feature:383045-383150:-1:exon
so has part: feature:382858-382962:-1:exon
so has part: feature:382430-382487:-1:exon
so has part: feature:382303-382349:-1:exon
so has part: feature:382071-382134:-1:exon
so has part: feature:381925-381999:-1:exon
so has part: feature:381696-381829:-1:exon
so has part: feature:381540-381649:-1:exon
so has part: feature:380359-380454:-1:exon
so has part: feature:380119-380288:-1:exon
so has part: feature:379966-380041:-1:exon
so has part: feature:379698-379874:-1:exon
so has part: feature:378841-378987:-1:exon
so has part: feature:377754-377862:-1:exon
so has part: feature:377590-377669:-1:exon
so has part: feature:377419-377510:-1:exon
so has part: feature:376714-377368:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:384455-384512:-1:exon

position:384455:-1
position: 384455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:384328-384360:-1:exon

position:384328:-1
position: 384328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384360:-1
position: 384360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:383227-383291:-1:exon

position:383227:-1
position: 383227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383291:-1
position: 383291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:383045-383150:-1:exon

position:383045:-1
position: 383045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383150:-1
position: 383150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:382858-382962:-1:exon

position:382858:-1
position: 382858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382962:-1
position: 382962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:382430-382487:-1:exon

position:382430:-1
position: 382430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382487:-1
position: 382487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:382303-382349:-1:exon

position:382303:-1
position: 382303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382349:-1
position: 382349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:382071-382134:-1:exon

position:382071:-1
position: 382071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382134:-1
position: 382134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:381925-381999:-1:exon

position:381925:-1
position: 381925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381999:-1
position: 381999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:381696-381829:-1:exon

position:381696:-1
position: 381696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381829:-1
position: 381829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:381540-381649:-1:exon

position:381540:-1
position: 381540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381649:-1
position: 381649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:380359-380454:-1:exon

position:380359:-1
position: 380359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380454:-1
position: 380454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:380119-380288:-1:exon

position:380119:-1
position: 380119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380288:-1
position: 380288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:379966-380041:-1:exon

position:379966:-1
position: 379966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380041:-1
position: 380041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:379698-379874:-1:exon

position:379698:-1
position: 379698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379874:-1
position: 379874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:378841-378987:-1:exon

position:378841:-1
position: 378841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378987:-1
position: 378987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:377754-377862:-1:exon

position:377754:-1
position: 377754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:377862:-1
position: 377862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:377590-377669:-1:exon

position:377590:-1
position: 377590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:377669:-1
position: 377669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:377419-377510:-1:exon

position:377419:-1
position: 377419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:377510:-1
position: 377510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:376714-377368:-1:exon

position:377368:-1
position: 377368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KRI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: KRI1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 5 bases in 4 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(381709..381711),aa:OTHER)
product: LOW QUALITY PROTEIN: protein KRI1 homolog
translation: MAEPKLRVNAAFAERYGRYGNGRYREELQRLRDRYGDSGDSSDSSESSGDDVALDPREEREFYRTLALLKTRDPRIYREDSTFYTRQESGEEEEEEEEEEEEXEAKPMFLKDYERKVVLEKEGKYVDEEDEEDEEAAAKRRKVEARSYAEEQRALKESDDEEEEGEVLLRPRVKSRQEKEEEEEQYLRWLRGQAEPPPEPLQDLEPLQKFWSDPALEPGERFLRIISWERXFREEEEEEEGDEGXVGPPAQTLPGGFSDEGEQFLQRQQEFERRHNFRFEEPGAAQIQTFPRQIPTSVRRRDERRKEKREQIRERKRKERARRREELKQLKNLKREELAARIARIREXSGGAAFGLSRSLLQEEFDPASHDRLMAEWFGEDYYGQEEEEKPQFEEEEGLDEEWNWDSWTGREEEPHCEDPDFVVRRGRGETPPLFGGGVLKGGTPPKAGTPPLKVGPLPFRPLSPPSPPGPPGPPGRAPPEVSFGKRRRKTRLREALEREKPPFDPGESPFEQYLDEFYGLDFEDTIGDLPCRFKYRRVLPCDFGLFPSQILAADDKELNRWCXLRKTCMYRSEQEERQDQANYSRRAQKPEEETSDPQIPRDPPDPSSLLNPPPHHHSPEEEGQHQPSRNWEETREKRKRQEEGKGETPPETPLRPLPKIQGVPDGGGGPPWAAVRLGGREFSGKRLEAFGLNPRRLRFRQLRREQGKEGGGGKKGGETPGKCREKWGGVGKCREGWEKYREHREKLWEHWGKYWEYREKYWECWEKYRE
SIO_010081: KRI1
subclass of: SO_0000673
so part of: KRI1
location: complement(join(376860..377368,377419..377510,377590..377669,377754..377862,378841..378987,379698..379874,379966..380041,380119..380288,380359..380454,381540..381649,381696..381829,381925..381999,382071..382134,382303..382349,382430..382487,382858..382962,383045..383150,383227..383291,384328..384360,384455..384512))
location: region:376860-384512:-1
so has part: feature:384455-384512:-1:exon
so has part: feature:384328-384360:-1:exon
so has part: feature:383227-383291:-1:exon
so has part: feature:383045-383150:-1:exon
so has part: feature:382858-382962:-1:exon
so has part: feature:382430-382487:-1:exon
so has part: feature:382303-382349:-1:exon
so has part: feature:382071-382134:-1:exon
so has part: feature:381925-381999:-1:exon
so has part: feature:381696-381829:-1:exon
so has part: feature:381540-381649:-1:exon
so has part: feature:380359-380454:-1:exon
so has part: feature:380119-380288:-1:exon
so has part: feature:379966-380041:-1:exon
so has part: feature:379698-379874:-1:exon
so has part: feature:378841-378987:-1:exon
so has part: feature:377754-377862:-1:exon
so has part: feature:377590-377669:-1:exon
so has part: feature:377419-377510:-1:exon
so has part: feature:376860-377368:-1:exon

XP_032939567.1
type: Protein
SIO_000068: ncbiprotein

position:376860:-1
position: 376860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384455-384512:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:384328-384360:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383227-383291:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:383045-383150:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:382858-382962:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:382430-382487:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:382303-382349:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:382071-382134:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:381925-381999:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:381696-381829:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:381540-381649:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:380359-380454:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:380119-380288:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:379966-380041:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:379698-379874:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:378841-378987:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:377754-377862:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:377590-377669:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:377419-377510:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:376860-377368:-1:exon

AP1M2
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: AP1M2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(384809..397985)
location: region:384809-397985:-1
so has part: feature:384809-397985:-1:exon
subclass of: SO_0000010

117009545
type: Gene
SIO_000068: ncbigene

position:384809:-1
position: 384809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397985:-1
position: 397985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384809-397985:-1:exon

AP1M2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: AP1M2
product: adaptor related protein complex 1 subunit mu 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033083790.1
SIO_010081: AP1M2
subclass of: SO_0000673
so part of: AP1M2
location: complement(join(384809..384886,385066..385141,386401..386522,387152..387309,387384..387455,388589..388730,390619..390746,394184..394331,394864..394994,395074..395140,396010..396165,397632..397985))
location: region:384809-397985:-1
so has part: feature:397632-397985:-1:exon
so has part: feature:396010-396165:-1:exon
so has part: feature:395074-395140:-1:exon
so has part: feature:394864-394994:-1:exon
so has part: feature:394184-394331:-1:exon
so has part: feature:390619-390746:-1:exon
so has part: feature:388589-388730:-1:exon
so has part: feature:387384-387455:-1:exon
so has part: feature:387152-387309:-1:exon
so has part: feature:386401-386522:-1:exon
so has part: feature:385066-385141:-1:exon
so has part: feature:384809-384886:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:397632-397985:-1:exon

position:397632:-1
position: 397632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:396010-396165:-1:exon

position:396010:-1
position: 396010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396165:-1
position: 396165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:395074-395140:-1:exon

position:395074:-1
position: 395074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395140:-1
position: 395140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:394864-394994:-1:exon

position:394864:-1
position: 394864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394994:-1
position: 394994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:394184-394331:-1:exon

position:394184:-1
position: 394184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394331:-1
position: 394331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:390619-390746:-1:exon

position:390619:-1
position: 390619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390746:-1
position: 390746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:388589-388730:-1:exon

position:388589:-1
position: 388589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388730:-1
position: 388730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:387384-387455:-1:exon

position:387384:-1
position: 387384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387455:-1
position: 387455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:387152-387309:-1:exon

position:387152:-1
position: 387152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387309:-1
position: 387309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:386401-386522:-1:exon

position:386401:-1
position: 386401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386522:-1
position: 386522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:385066-385141:-1:exon

position:385066:-1
position: 385066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385141:-1
position: 385141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:384809-384886:-1:exon

position:384886:-1
position: 384886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AP1M2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: AP1M2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: AP-1 complex subunit mu-2
translation: MAASAIFILDLKGKPLISRNYKGDVGLGAIENFLGVLQQREEEGALSPVLRHGXVHFLWIKHANLYLVAVTRKTAXASLVFSFLYKVVEVFSEYFKELEEESIRDNFVVIYELLDELMDFGFPQTTDSKILQEYITQEGAKLDTGKSRVPTTVTNAVSWRSEGIRYKKNEVFIDVIEAVNLLVSASGAVLLSEVLGTIRLKVFPVGDARAAPVGSRPSPVRADGPGEEQVVELEDVKFHQCVRLSRFDNDRTISFIPPDGDFELMSYRLHTQVKPLIWIESIIEKFSHSRVEIMVKAKGQFKKQSVANXVEISVPVPSDADSPKFKTTVGSARYVPERNVLIWSIKSFPGGKEHLMXAHFGLPSVEKEEGGETPIAVRFEIPYFTVSGIQVRYMKIIEKSGYQALPWVRYITQSGDYQIRTS
SIO_010081: AP1M2
subclass of: SO_0000673
so part of: AP1M2
location: complement(join(384864..384886,385066..385141,386401..386522,387152..387309,387384..387455,388589..388730,390619..390746,394184..394331,394864..394994,395074..395140,396010..396165,397632..397673))
location: region:384864-397673:-1
so has part: feature:397632-397673:-1:exon
so has part: feature:396010-396165:-1:exon
so has part: feature:395074-395140:-1:exon
so has part: feature:394864-394994:-1:exon
so has part: feature:394184-394331:-1:exon
so has part: feature:390619-390746:-1:exon
so has part: feature:388589-388730:-1:exon
so has part: feature:387384-387455:-1:exon
so has part: feature:387152-387309:-1:exon
so has part: feature:386401-386522:-1:exon
so has part: feature:385066-385141:-1:exon
so has part: feature:384864-384886:-1:exon

XP_032939681.1
type: Protein
SIO_000068: ncbiprotein

position:384864:-1
position: 384864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397673:-1
position: 397673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397632-397673:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:396010-396165:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:395074-395140:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:394864-394994:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:394184-394331:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:390619-390746:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:388589-388730:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:387384-387455:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:387152-387309:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:386401-386522:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:385066-385141:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:384864-384886:-1:exon

SLC44A2
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: SLC44A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 397672..420627
location: region:397672-420627:1
so has part: feature:397672-420627:1:exon
subclass of: SO_0000010

117009443
type: Gene
SIO_000068: ncbigene

position:397672:1
position: 397672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420627:1
position: 420627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397672-420627:1:exon

SLC44A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SLC44A2
product: solute carrier family 44 member 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; deleted 1 base in 1 codon
transcript id: XM_033083677.1
SIO_010081: SLC44A2
subclass of: SO_0000673
so part of: SLC44A2
location: join(397672..397698,399776..399888,402523..402570,404119..404192,404802..404886,405911..405995,407460..407576,407662..407722,407832..407954,409925..410008,410119..410230,412170..412298,412805..412901,413571..413666,414342..414426,416137..416398,416476..416570,417709..417812,418863..418936,419006..419076,419172..419261,419616..419700,420071..420627)
location: region:397672-420627:1
so has part: feature:397672-397698:1:exon
so has part: feature:399776-399888:1:exon
so has part: feature:402523-402570:1:exon
so has part: feature:404119-404192:1:exon
so has part: feature:404802-404886:1:exon
so has part: feature:405911-405995:1:exon
so has part: feature:407460-407576:1:exon
so has part: feature:407662-407722:1:exon
so has part: feature:407832-407954:1:exon
so has part: feature:409925-410008:1:exon
so has part: feature:410119-410230:1:exon
so has part: feature:412170-412298:1:exon
so has part: feature:412805-412901:1:exon
so has part: feature:413571-413666:1:exon
so has part: feature:414342-414426:1:exon
so has part: feature:416137-416398:1:exon
so has part: feature:416476-416570:1:exon
so has part: feature:417709-417812:1:exon
so has part: feature:418863-418936:1:exon
so has part: feature:419006-419076:1:exon
so has part: feature:419172-419261:1:exon
so has part: feature:419616-419700:1:exon
so has part: feature:420071-420627:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:397672-397698:1:exon

position:397698:1
position: 397698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:399776-399888:1:exon

position:399776:1
position: 399776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399888:1
position: 399888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:402523-402570:1:exon

position:402523:1
position: 402523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402570:1
position: 402570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:404119-404192:1:exon

position:404119:1
position: 404119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404192:1
position: 404192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:404802-404886:1:exon

position:404802:1
position: 404802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404886:1
position: 404886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:405911-405995:1:exon

position:405911:1
position: 405911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405995:1
position: 405995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:407460-407576:1:exon

position:407460:1
position: 407460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407576:1
position: 407576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:407662-407722:1:exon

position:407662:1
position: 407662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407722:1
position: 407722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:407832-407954:1:exon

position:407832:1
position: 407832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407954:1
position: 407954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:409925-410008:1:exon

position:409925:1
position: 409925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410008:1
position: 410008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:410119-410230:1:exon

position:410119:1
position: 410119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410230:1
position: 410230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:412170-412298:1:exon

position:412170:1
position: 412170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412298:1
position: 412298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:412805-412901:1:exon

position:412805:1
position: 412805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412901:1
position: 412901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:413571-413666:1:exon

position:413571:1
position: 413571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413666:1
position: 413666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:414342-414426:1:exon

position:414342:1
position: 414342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414426:1
position: 414426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:416137-416398:1:exon

position:416137:1
position: 416137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416398:1
position: 416398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:416476-416570:1:exon

position:416476:1
position: 416476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416570:1
position: 416570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:417709-417812:1:exon

position:417709:1
position: 417709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417812:1
position: 417812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:418863-418936:1:exon

position:418863:1
position: 418863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418936:1
position: 418936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:419006-419076:1:exon

position:419006:1
position: 419006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419076:1
position: 419076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:419172-419261:1:exon

position:419172:1
position: 419172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419261:1
position: 419261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:419616-419700:1:exon

position:419616:1
position: 419616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419700:1
position: 419700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:420071-420627:1:exon

position:420071:1
position: 420071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC44A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SLC44A2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: choline transporter-like protein 2
translation: MAAPLSPAQPSPAQPSRLGSDRNGSGGGGSGGVRDGGTRGQLLRQARDPQKYDPTFKGPIYDRGCTDIVCCVLLLLAIVGYVVVGVVAWTHGDPRKVIHPTDSRGQFCGQQGTPNQNKPFLFYFDIVKCASPLVLLEFQCPTTQICVSKCPDRYLTFRTAQTNPASLDYYRNFCTPEFKNPLKGVLEVLRDKECPAMLIPSTPLARRCXPAIHAKQGVIMVGNETTYDDGSGRRRNVTELLEGAKQANVVLEARQLAMKIFEDYTVSWYWIIIGLVIAMLASLIFIVLLRFLAGVMVWXMIVMVILVLGYGIFHCYRSTPAEGEAGSDVSLSELGFQTDLRVYLHLRQTWLAFMIILCVLELLIVLLLIFLRKRILIAIALIKEPARAVGHVMSSLLFPLCTFFLLCLCIAYWASTAVFLSTSNEAVYKVFNESACPFSGHTCKPETFNTSNVTKQCXDAQCLFAFYGGETAYHKYLIVLQFFNVFMFFWLANFVIALGQVTLAGAFASYYWAFKKPDDMPAFPLFSAFGRALRYHTGSLAFGSLVLAIVQVIRVILEYLDHRLKAAENKFAKFLLSCLKCCFWCLEKFIKFLNRNAYIMIAIYGTNFCTSARNAFFLLMRNIIRVAVLDKVTDFLFFLGKLLIVGSVGILAFFFFTHRIKLVEDTAPSLNYYWVPILTVIVGSYLIAHGFFSVYGMCVDTLFLCFCEDLERNDGSPERPYYMSPELSEILLKGHLEPSKSADSQG
SIO_010081: SLC44A2
subclass of: SO_0000673
so part of: SLC44A2
location: join(397672..397698,399776..399888,402523..402570,404119..404192,404802..404886,405911..405995,407460..407576,407662..407722,407832..407954,409925..410008,410119..410230,412170..412298,412805..412901,413571..413666,414342..414426,416137..416398,416476..416570,417709..417812,418863..418936,419006..419076,419172..419261,419616..419700,420071..420192)
location: region:397672-420192:1
so has part: feature:397672-397698:1:exon
so has part: feature:399776-399888:1:exon
so has part: feature:402523-402570:1:exon
so has part: feature:404119-404192:1:exon
so has part: feature:404802-404886:1:exon
so has part: feature:405911-405995:1:exon
so has part: feature:407460-407576:1:exon
so has part: feature:407662-407722:1:exon
so has part: feature:407832-407954:1:exon
so has part: feature:409925-410008:1:exon
so has part: feature:410119-410230:1:exon
so has part: feature:412170-412298:1:exon
so has part: feature:412805-412901:1:exon
so has part: feature:413571-413666:1:exon
so has part: feature:414342-414426:1:exon
so has part: feature:416137-416398:1:exon
so has part: feature:416476-416570:1:exon
so has part: feature:417709-417812:1:exon
so has part: feature:418863-418936:1:exon
so has part: feature:419006-419076:1:exon
so has part: feature:419172-419261:1:exon
so has part: feature:419616-419700:1:exon
so has part: feature:420071-420192:1:exon

XP_032939568.1
type: Protein
SIO_000068: ncbiprotein

position:420192:1
position: 420192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397672-397698:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:399776-399888:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:402523-402570:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:404119-404192:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404802-404886:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:405911-405995:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:407460-407576:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:407662-407722:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:407832-407954:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:409925-410008:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:410119-410230:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:412170-412298:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:412805-412901:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:413571-413666:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:414342-414426:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:416137-416398:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:416476-416570:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:417709-417812:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:418863-418936:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:419006-419076:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:419172-419261:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:419616-419700:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:420071-420192:1:exon

ILF3
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: ILF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 425151..463617
location: region:425151-463617:1
so has part: feature:425151-463617:1:exon
subclass of: SO_0000010

117009536
type: Gene
SIO_000068: ncbigene

position:425151:1
position: 425151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463617:1
position: 463617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425151-463617:1:exon

ILF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ILF3
product: interleukin enhancer binding factor 3, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083778.1
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(425151..425178,428296..428392,428476..428702,431146..431326,431809..431956,433248..433339,434645..434740,439904..440015,441821..441918,443823..443934,444017..444127,447062..447261,449288..449455,451688..451825,452849..453025,454659..454815,457086..457139,459593..459928,461792..461920,463173..463617)
location: region:425151-463617:1
so has part: feature:425151-425178:1:exon
so has part: feature:428296-428392:1:exon
so has part: feature:428476-428702:1:exon
so has part: feature:431146-431326:1:exon
so has part: feature:431809-431956:1:exon
so has part: feature:433248-433339:1:exon
so has part: feature:434645-434740:1:exon
so has part: feature:439904-440015:1:exon
so has part: feature:441821-441918:1:exon
so has part: feature:443823-443934:1:exon
so has part: feature:444017-444127:1:exon
so has part: feature:447062-447261:1:exon
so has part: feature:449288-449455:1:exon
so has part: feature:451688-451825:1:exon
so has part: feature:452849-453025:1:exon
so has part: feature:454659-454815:1:exon
so has part: feature:457086-457139:1:exon
so has part: feature:459593-459928:1:exon
so has part: feature:461792-461920:1:exon
so has part: feature:463173-463617:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:425151-425178:1:exon

position:425178:1
position: 425178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:428296-428392:1:exon

position:428296:1
position: 428296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428392:1
position: 428392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:428476-428702:1:exon

position:428476:1
position: 428476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428702:1
position: 428702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:431146-431326:1:exon

position:431146:1
position: 431146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431326:1
position: 431326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:431809-431956:1:exon

position:431809:1
position: 431809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431956:1
position: 431956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:433248-433339:1:exon

position:433248:1
position: 433248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433339:1
position: 433339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:434645-434740:1:exon

position:434645:1
position: 434645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434740:1
position: 434740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:439904-440015:1:exon

position:439904:1
position: 439904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440015:1
position: 440015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:441821-441918:1:exon

position:441821:1
position: 441821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441918:1
position: 441918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:443823-443934:1:exon

position:443823:1
position: 443823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443934:1
position: 443934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:444017-444127:1:exon

position:444017:1
position: 444017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444127:1
position: 444127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:447062-447261:1:exon

position:447062:1
position: 447062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447261:1
position: 447261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:449288-449455:1:exon

position:449288:1
position: 449288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449455:1
position: 449455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:451688-451825:1:exon

position:451688:1
position: 451688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451825:1
position: 451825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:452849-453025:1:exon

position:452849:1
position: 452849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453025:1
position: 453025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:454659-454815:1:exon

position:454659:1
position: 454659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454815:1
position: 454815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:457086-457139:1:exon

position:457086:1
position: 457086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457139:1
position: 457139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:459593-459928:1:exon

position:459593:1
position: 459593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459928:1
position: 459928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:461792-461920:1:exon

position:461792:1
position: 461792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461920:1
position: 461920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:463173-463617:1:exon

position:463173:1
position: 463173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ILF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ILF3
product: interleukin enhancer binding factor 3, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083777.1
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(425372..425406,428296..428392,428476..428702,431146..431326,431809..431956,433248..433339,434645..434740,439904..440015,441821..441918,443823..443934,444017..444127,447062..447261,449288..449455,451688..451825,452849..453025,454659..454815,457086..457139,459593..459928,461792..461920,463173..463617)
location: region:425372-463617:1
so has part: feature:425372-425406:1:exon
so has part: feature:428296-428392:1:exon
so has part: feature:428476-428702:1:exon
so has part: feature:431146-431326:1:exon
so has part: feature:431809-431956:1:exon
so has part: feature:433248-433339:1:exon
so has part: feature:434645-434740:1:exon
so has part: feature:439904-440015:1:exon
so has part: feature:441821-441918:1:exon
so has part: feature:443823-443934:1:exon
so has part: feature:444017-444127:1:exon
so has part: feature:447062-447261:1:exon
so has part: feature:449288-449455:1:exon
so has part: feature:451688-451825:1:exon
so has part: feature:452849-453025:1:exon
so has part: feature:454659-454815:1:exon
so has part: feature:457086-457139:1:exon
so has part: feature:459593-459928:1:exon
so has part: feature:461792-461920:1:exon
so has part: feature:463173-463617:1:exon

position:425372:1
position: 425372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425372-425406:1:exon

position:425406:1
position: 425406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:428296-428392:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:428476-428702:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:431146-431326:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:431809-431956:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:433248-433339:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:434645-434740:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:439904-440015:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:441821-441918:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:443823-443934:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:444017-444127:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:447062-447261:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:449288-449455:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:451688-451825:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:452849-453025:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:454659-454815:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:457086-457139:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:459593-459928:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:461792-461920:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:463173-463617:1:exon

ILF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ILF3
product: interleukin enhancer binding factor 3, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083780.1
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(425372..425406,428296..428392,428476..428702,431146..431326,431809..431956,433248..433339,434645..434740,439904..440015,441821..441918,443823..443934,444017..444127,447062..447261,449288..449455,451688..451825,452849..453025,454659..454815,457086..457139,459593..459928,461792..461911,463173..463617)
location: region:425372-463617:1
so has part: feature:425372-425406:1:exon
so has part: feature:428296-428392:1:exon
so has part: feature:428476-428702:1:exon
so has part: feature:431146-431326:1:exon
so has part: feature:431809-431956:1:exon
so has part: feature:433248-433339:1:exon
so has part: feature:434645-434740:1:exon
so has part: feature:439904-440015:1:exon
so has part: feature:441821-441918:1:exon
so has part: feature:443823-443934:1:exon
so has part: feature:444017-444127:1:exon
so has part: feature:447062-447261:1:exon
so has part: feature:449288-449455:1:exon
so has part: feature:451688-451825:1:exon
so has part: feature:452849-453025:1:exon
so has part: feature:454659-454815:1:exon
so has part: feature:457086-457139:1:exon
so has part: feature:459593-459928:1:exon
so has part: feature:461792-461911:1:exon
so has part: feature:463173-463617:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:425372-425406:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:428296-428392:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:428476-428702:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:431146-431326:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:431809-431956:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:433248-433339:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:434645-434740:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:439904-440015:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:441821-441918:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:443823-443934:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:444017-444127:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:447062-447261:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:449288-449455:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:451688-451825:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:452849-453025:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:454659-454815:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:457086-457139:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:459593-459928:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:461792-461911:1:exon

position:461911:1
position: 461911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:463173-463617:1:exon

ILF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ILF3
product: interleukin enhancer binding factor 3, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083779.1
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(425372..425406,428296..428392,428476..428702,431146..431326,431809..431956,433248..433339,434645..434740,439904..440015,441821..441918,443823..443934,444017..444127,447062..447261,449288..449455,451688..451825,452849..453025,454662..454815,457086..457139,459593..459928,461792..461920,463173..463617)
location: region:425372-463617:1
so has part: feature:425372-425406:1:exon
so has part: feature:428296-428392:1:exon
so has part: feature:428476-428702:1:exon
so has part: feature:431146-431326:1:exon
so has part: feature:431809-431956:1:exon
so has part: feature:433248-433339:1:exon
so has part: feature:434645-434740:1:exon
so has part: feature:439904-440015:1:exon
so has part: feature:441821-441918:1:exon
so has part: feature:443823-443934:1:exon
so has part: feature:444017-444127:1:exon
so has part: feature:447062-447261:1:exon
so has part: feature:449288-449455:1:exon
so has part: feature:451688-451825:1:exon
so has part: feature:452849-453025:1:exon
so has part: feature:454662-454815:1:exon
so has part: feature:457086-457139:1:exon
so has part: feature:459593-459928:1:exon
so has part: feature:461792-461920:1:exon
so has part: feature:463173-463617:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:425372-425406:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:428296-428392:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:428476-428702:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:431146-431326:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:431809-431956:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:433248-433339:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:434645-434740:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:439904-440015:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:441821-441918:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:443823-443934:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:444017-444127:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:447062-447261:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:449288-449455:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:451688-451825:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:452849-453025:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:454662-454815:1:exon

position:454662:1
position: 454662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:457086-457139:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:459593-459928:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:461792-461920:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:463173-463617:1:exon

ILF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ILF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin enhancer-binding factor 3 isoform X1
translation: MRPMRIFVNDDRHVMAKHSAVYPTQEELEAVQNMVSHTERALKAVSDWIDEQEKVSGEQPEAESMETAPDDDSKEGGDQKAAEQLTRTLRGVMRVGLVAKGLLLKGDLDLELVLLCKDKPTAKLLEKVADNLGVQLAAITEDKYEIIQSVADAAIVIKNTKEPPLSLTIHLTSPVVREELEKQLAGETLSVTDSPDVLDRQKCLAALASLRHAKWFQARANGLKSCVIVIRVLRDLCTRVPTWAPLRGWPLELLCEKSIGTANRPMGAGEALRRVLECLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMDPLPSKMPKKPKNENPVDYTVQIPPSTTYAVTPMKRPMEEDGEEKSPSKKKKKIQKKEEKLEPPQAMNALMKLNQLKPGLQYKLVSQTGPVHAPIFTMSVEIDGSTFEASGPSKKTAKLHVAVKVLQDMGLPTGVEGKDSKGDESAEESDTKPVVVAPPPVVETVTTPTAASPPSEQTPENVKQQGPILTKHGKNPVMELNEKRRGLKYELISETGGSHDKRFVMEVEVDGQKFQGAGSNKKVAKAYAALAALEKLFPDAPVAIEQNKKKRAPVPARGGPKFPVKQHNPGFGMGGGPMHNEAPPPPNLRGRGRGGNIRGRGRGRGGFGGNHGGYMNTGSGYGSYGYGGNSATAGYSQFYSNGGHSNSGGGGGSSGYGSYYQGGGDGYSAPAPPKHGKKQQQHGQKGSYGSGYGGHQGQQPYGQGQYSGYGPGQGKQKGYGHGQGGYSYSNSYNSPGGGSDYSYESKYSYSSSSGRGGGGNNYSGGGSYSSGSHGGYGGSGGGGSSYQGKAGGYSSQSNYNSPGSQNYSGPPSSYQASQGGYGRNEHSMSYQYR
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(428390..428392,428476..428702,431146..431326,431809..431956,433248..433339,434645..434740,439904..440015,441821..441918,443823..443934,444017..444127,447062..447261,449288..449455,451688..451825,452849..453025,454659..454815,457086..457139,459593..459928,461792..461920,463173..463303)
location: region:428390-463303:1
so has part: feature:428390-428392:1:exon
so has part: feature:428476-428702:1:exon
so has part: feature:431146-431326:1:exon
so has part: feature:431809-431956:1:exon
so has part: feature:433248-433339:1:exon
so has part: feature:434645-434740:1:exon
so has part: feature:439904-440015:1:exon
so has part: feature:441821-441918:1:exon
so has part: feature:443823-443934:1:exon
so has part: feature:444017-444127:1:exon
so has part: feature:447062-447261:1:exon
so has part: feature:449288-449455:1:exon
so has part: feature:451688-451825:1:exon
so has part: feature:452849-453025:1:exon
so has part: feature:454659-454815:1:exon
so has part: feature:457086-457139:1:exon
so has part: feature:459593-459928:1:exon
so has part: feature:461792-461920:1:exon
so has part: feature:463173-463303:1:exon

XP_032939668.1
type: Protein
SIO_000068: ncbiprotein

position:428390:1
position: 428390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463303:1
position: 463303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428390-428392:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:428476-428702:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:431146-431326:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:431809-431956:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:433248-433339:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:434645-434740:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:439904-440015:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:441821-441918:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:443823-443934:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:444017-444127:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:447062-447261:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:449288-449455:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:451688-451825:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:452849-453025:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:454659-454815:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:457086-457139:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:459593-459928:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:461792-461920:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:463173-463303:1:exon

ILF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ILF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin enhancer-binding factor 3 isoform X1
translation: MRPMRIFVNDDRHVMAKHSAVYPTQEELEAVQNMVSHTERALKAVSDWIDEQEKVSGEQPEAESMETAPDDDSKEGGDQKAAEQLTRTLRGVMRVGLVAKGLLLKGDLDLELVLLCKDKPTAKLLEKVADNLGVQLAAITEDKYEIIQSVADAAIVIKNTKEPPLSLTIHLTSPVVREELEKQLAGETLSVTDSPDVLDRQKCLAALASLRHAKWFQARANGLKSCVIVIRVLRDLCTRVPTWAPLRGWPLELLCEKSIGTANRPMGAGEALRRVLECLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMDPLPSKMPKKPKNENPVDYTVQIPPSTTYAVTPMKRPMEEDGEEKSPSKKKKKIQKKEEKLEPPQAMNALMKLNQLKPGLQYKLVSQTGPVHAPIFTMSVEIDGSTFEASGPSKKTAKLHVAVKVLQDMGLPTGVEGKDSKGDESAEESDTKPVVVAPPPVVETVTTPTAASPPSEQTPENVKQQGPILTKHGKNPVMELNEKRRGLKYELISETGGSHDKRFVMEVEVDGQKFQGAGSNKKVAKAYAALAALEKLFPDAPVAIEQNKKKRAPVPARGGPKFPVKQHNPGFGMGGGPMHNEAPPPPNLRGRGRGGNIRGRGRGRGGFGGNHGGYMNTGSGYGSYGYGGNSATAGYSQFYSNGGHSNSGGGGGSSGYGSYYQGGGDGYSAPAPPKHGKKQQQHGQKGSYGSGYGGHQGQQPYGQGQYSGYGPGQGKQKGYGHGQGGYSYSNSYNSPGGGSDYSYESKYSYSSSSGRGGGGNNYSGGGSYSSGSHGGYGGSGGGGSSYQGKAGGYSSQSNYNSPGSQNYSGPPSSYQASQGGYGRNEHSMSYQYR
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(428390..428392,428476..428702,431146..431326,431809..431956,433248..433339,434645..434740,439904..440015,441821..441918,443823..443934,444017..444127,447062..447261,449288..449455,451688..451825,452849..453025,454659..454815,457086..457139,459593..459928,461792..461920,463173..463303)
location: region:428390-463303:1
so has part: feature:428390-428392:1:exon
so has part: feature:428476-428702:1:exon
so has part: feature:431146-431326:1:exon
so has part: feature:431809-431956:1:exon
so has part: feature:433248-433339:1:exon
so has part: feature:434645-434740:1:exon
so has part: feature:439904-440015:1:exon
so has part: feature:441821-441918:1:exon
so has part: feature:443823-443934:1:exon
so has part: feature:444017-444127:1:exon
so has part: feature:447062-447261:1:exon
so has part: feature:449288-449455:1:exon
so has part: feature:451688-451825:1:exon
so has part: feature:452849-453025:1:exon
so has part: feature:454659-454815:1:exon
so has part: feature:457086-457139:1:exon
so has part: feature:459593-459928:1:exon
so has part: feature:461792-461920:1:exon
so has part: feature:463173-463303:1:exon

XP_032939669.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:428390-428392:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:428476-428702:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:431146-431326:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:431809-431956:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:433248-433339:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:434645-434740:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:439904-440015:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:441821-441918:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:443823-443934:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:444017-444127:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:447062-447261:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:449288-449455:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:451688-451825:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:452849-453025:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:454659-454815:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:457086-457139:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:459593-459928:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:461792-461920:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:463173-463303:1:exon

ILF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ILF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin enhancer-binding factor 3 isoform X3
translation: MRPMRIFVNDDRHVMAKHSAVYPTQEELEAVQNMVSHTERALKAVSDWIDEQEKVSGEQPEAESMETAPDDDSKEGGDQKAAEQLTRTLRGVMRVGLVAKGLLLKGDLDLELVLLCKDKPTAKLLEKVADNLGVQLAAITEDKYEIIQSVADAAIVIKNTKEPPLSLTIHLTSPVVREELEKQLAGETLSVTDSPDVLDRQKCLAALASLRHAKWFQARANGLKSCVIVIRVLRDLCTRVPTWAPLRGWPLELLCEKSIGTANRPMGAGEALRRVLECLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMDPLPSKMPKKPKNENPVDYTVQIPPSTTYAVTPMKRPMEEDGEEKSPSKKKKKIQKKEEKLEPPQAMNALMKLNQLKPGLQYKLVSQTGPVHAPIFTMSVEIDGSTFEASGPSKKTAKLHVAVKVLQDMGLPTGVEGKDSKGDESAEESDTKPVVVAPPPVVETVTTPTAASPPSEQTPENVKQQGPILTKHGKNPVMELNEKRRGLKYELISETGGSHDKRFVMEVEVDGQKFQGAGSNKKVAKAYAALAALEKLFPDAPVAIEQNKKKRAPVPARGGPKFPVKQHNPGFGMGGGPMHNEAPPPPNLRGRGRGGNIRGRGRGRGGFGGNHGGYMNTGSGYGSYGYGGNSATAGYSQFYSNGGHSNSGGGGGSSGYGSYYQGGGDGYSAPAPPKHGKKQQQHGQKGSYGSGYGGHQGQQPYGQGQYSGYGPGQGKQKGYGHGQGGYSYSNSYNSPGGGSDYSYESKYSYSSSSGRGGGGNNYSGGGSYSSGSHGGYGGSGGGGSSYQGGYSSQSNYNSPGSQNYSGPPSSYQASQGGYGRNEHSMSYQYR
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(428390..428392,428476..428702,431146..431326,431809..431956,433248..433339,434645..434740,439904..440015,441821..441918,443823..443934,444017..444127,447062..447261,449288..449455,451688..451825,452849..453025,454659..454815,457086..457139,459593..459928,461792..461911,463173..463303)
location: region:428390-463303:1
so has part: feature:428390-428392:1:exon
so has part: feature:428476-428702:1:exon
so has part: feature:431146-431326:1:exon
so has part: feature:431809-431956:1:exon
so has part: feature:433248-433339:1:exon
so has part: feature:434645-434740:1:exon
so has part: feature:439904-440015:1:exon
so has part: feature:441821-441918:1:exon
so has part: feature:443823-443934:1:exon
so has part: feature:444017-444127:1:exon
so has part: feature:447062-447261:1:exon
so has part: feature:449288-449455:1:exon
so has part: feature:451688-451825:1:exon
so has part: feature:452849-453025:1:exon
so has part: feature:454659-454815:1:exon
so has part: feature:457086-457139:1:exon
so has part: feature:459593-459928:1:exon
so has part: feature:461792-461911:1:exon
so has part: feature:463173-463303:1:exon

XP_032939671.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:428390-428392:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:428476-428702:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:431146-431326:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:431809-431956:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:433248-433339:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:434645-434740:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:439904-440015:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:441821-441918:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:443823-443934:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:444017-444127:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:447062-447261:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:449288-449455:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:451688-451825:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:452849-453025:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:454659-454815:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:457086-457139:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:459593-459928:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:461792-461911:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:463173-463303:1:exon

ILF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ILF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin enhancer-binding factor 3 isoform X2
translation: MRPMRIFVNDDRHVMAKHSAVYPTQEELEAVQNMVSHTERALKAVSDWIDEQEKVSGEQPEAESMETAPDDDSKEGGDQKAAEQLTRTLRGVMRVGLVAKGLLLKGDLDLELVLLCKDKPTAKLLEKVADNLGVQLAAITEDKYEIIQSVADAAIVIKNTKEPPLSLTIHLTSPVVREELEKQLAGETLSVTDSPDVLDRQKCLAALASLRHAKWFQARANGLKSCVIVIRVLRDLCTRVPTWAPLRGWPLELLCEKSIGTANRPMGAGEALRRVLECLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMDPLPSKMPKKPKNENPVDYTVQIPPSTTYAVTPMKRPMEEDGEEKSPSKKKKKIQKKEEKLEPPQAMNALMKLNQLKPGLQYKLVSQTGPVHAPIFTMSVEIDGSTFEASGPSKKTAKLHVAVKVLQDMGLPTGVEGKDSKGDESAEESDTKPVVVAPPPVVETVTTPTAASPPSEQTPENVKQQGPILTKHGKNPVMELNEKRRGLKYELISETGGSHDKRFVMEVEVDGQKFQGAGSNKKVAKAYAALAALEKLFPDAPVAIEQNKKKRAPVPARGGPKFPVKHNPGFGMGGGPMHNEAPPPPNLRGRGRGGNIRGRGRGRGGFGGNHGGYMNTGSGYGSYGYGGNSATAGYSQFYSNGGHSNSGGGGGSSGYGSYYQGGGDGYSAPAPPKHGKKQQQHGQKGSYGSGYGGHQGQQPYGQGQYSGYGPGQGKQKGYGHGQGGYSYSNSYNSPGGGSDYSYESKYSYSSSSGRGGGGNNYSGGGSYSSGSHGGYGGSGGGGSSYQGKAGGYSSQSNYNSPGSQNYSGPPSSYQASQGGYGRNEHSMSYQYR
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(428390..428392,428476..428702,431146..431326,431809..431956,433248..433339,434645..434740,439904..440015,441821..441918,443823..443934,444017..444127,447062..447261,449288..449455,451688..451825,452849..453025,454662..454815,457086..457139,459593..459928,461792..461920,463173..463303)
location: region:428390-463303:1
so has part: feature:428390-428392:1:exon
so has part: feature:428476-428702:1:exon
so has part: feature:431146-431326:1:exon
so has part: feature:431809-431956:1:exon
so has part: feature:433248-433339:1:exon
so has part: feature:434645-434740:1:exon
so has part: feature:439904-440015:1:exon
so has part: feature:441821-441918:1:exon
so has part: feature:443823-443934:1:exon
so has part: feature:444017-444127:1:exon
so has part: feature:447062-447261:1:exon
so has part: feature:449288-449455:1:exon
so has part: feature:451688-451825:1:exon
so has part: feature:452849-453025:1:exon
so has part: feature:454662-454815:1:exon
so has part: feature:457086-457139:1:exon
so has part: feature:459593-459928:1:exon
so has part: feature:461792-461920:1:exon
so has part: feature:463173-463303:1:exon

XP_032939670.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:428390-428392:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:428476-428702:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:431146-431326:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:431809-431956:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:433248-433339:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:434645-434740:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:439904-440015:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:441821-441918:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:443823-443934:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:444017-444127:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:447062-447261:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:449288-449455:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:451688-451825:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:452849-453025:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:454662-454815:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:457086-457139:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:459593-459928:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:461792-461920:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:463173-463303:1:exon

LOC117009444
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009444
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(467802..470492)
location: region:467802-470492:-1
so has part: feature:467802-470492:-1:exon
subclass of: SO_0000010

117009444
type: Gene
SIO_000068: ncbigene

position:467802:-1
position: 467802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:470492:-1
position: 470492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:467802-470492:-1:exon

LOC117009444
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009444
product: beta-1,3-galactosyltransferase 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_033083678.1
SIO_010081: LOC117009444
subclass of: SO_0000673
so part of: LOC117009444
location: complement(join(467802..468708,470377..470492))
location: region:467802-470492:-1
so has part: feature:470377-470492:-1:exon
so has part: feature:467802-468708:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:470377-470492:-1:exon

position:470377:-1
position: 470377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:467802-468708:-1:exon

position:468708:-1
position: 468708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009444
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009444
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-1,3-galactosyltransferase 2-like
translation: MNWAELDSAPAPPSAPQRPPNWSDWWNWRGPGGASALIATPEPPRAAPQRSGNATTAPRPPRPPRHELQPPYPYPYRWLLNHPDKCRERTPFLVLLVVSSPADLAARDAVRRTWGDESAVPGLSVLRLFLLGLHPVFGAELRSVLREEDELYGDLIQQDFLDTYNNLTLKTLMGLEWVSRFCPNATYVVKADHDVFLNLEFLWRLLRPVRTDLATGYVYRHTGPLRNRAYKWFVPREVYPNDTYPPYCGGPAYVLSGPLALRVFAVAQLLPVINMEDAFVGICLHALGVPVTDPPAGAFNMYRLDYDKCRFSRLVMVHHYWPRDLLRVWPHFRNESVKCP
SIO_010081: LOC117009444
subclass of: SO_0000673
so part of: LOC117009444
location: complement(join(467802..468708,470377..470492))
location: region:467802-470492:-1
so has part: feature:470377-470492:-1:exon
so has part: feature:467802-468708:-1:exon

XP_032939569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:470377-470492:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:467802-468708:-1:exon

QTRT1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: QTRT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(476659..482781)
location: region:476659-482781:-1
so has part: feature:476659-482781:-1:exon
subclass of: SO_0000010

117009534
type: Gene
SIO_000068: ncbigene

position:476659:-1
position: 476659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482781:-1
position: 482781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476659-482781:-1:exon

QTRT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: QTRT1
product: queuine tRNA-ribosyltransferase catalytic subunit 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033083774.1
SIO_010081: QTRT1
subclass of: SO_0000673
so part of: QTRT1
location: complement(join(476659..476868,476972..477056,477147..477256,477368..477443,477532..477670,480455..480570,481640..481718,482049..482187,482282..482350,482545..482781))
location: region:476659-482781:-1
so has part: feature:482545-482781:-1:exon
so has part: feature:482282-482350:-1:exon
so has part: feature:482049-482187:-1:exon
so has part: feature:481640-481718:-1:exon
so has part: feature:480455-480570:-1:exon
so has part: feature:477532-477670:-1:exon
so has part: feature:477368-477443:-1:exon
so has part: feature:477147-477256:-1:exon
so has part: feature:476972-477056:-1:exon
so has part: feature:476659-476868:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:482545-482781:-1:exon

position:482545:-1
position: 482545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:482282-482350:-1:exon

position:482282:-1
position: 482282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482350:-1
position: 482350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:482049-482187:-1:exon

position:482049:-1
position: 482049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482187:-1
position: 482187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:481640-481718:-1:exon

position:481640:-1
position: 481640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481718:-1
position: 481718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:480455-480570:-1:exon

position:480455:-1
position: 480455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480570:-1
position: 480570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:477532-477670:-1:exon

position:477532:-1
position: 477532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477670:-1
position: 477670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:477368-477443:-1:exon

position:477368:-1
position: 477368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477443:-1
position: 477443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:477147-477256:-1:exon

position:477147:-1
position: 477147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477256:-1
position: 477256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:476972-477056:-1:exon

position:476972:-1
position: 476972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477056:-1
position: 477056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:476659-476868:-1:exon

position:476868:-1
position: 476868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

QTRT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: QTRT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: queuine tRNA-ribosyltransferase catalytic subunit 1
translation: MAAPAAGPALPVPVLRVVAECGRSRARAGELRLPHGTVPCPVFMPVGTRGTAKGLTAAQLAALGCRICLGNTFHLGTRPGAELVQRSGGLHGFMDWPHNLLTDSGGFQMVSLLELSEVSEEGVRFQPPHGGEQILLSPEKSMEIQNALGADIVMQLDDVVSSTTTGPRVEEAMHRSVRWLDRCLAAHSRPQQQLLFAIVQGGLDLELRRRCIQAMTQRDVPGFAIGGLSGGEDKAQFWRTVKFSAELLPRDKPRYLMGVGYATDLVVCVALGCDMFDCVFPTRTARFGSALVPWGSLQLKNRQFAKDFRPIDADCGCPTCQRYSRAYLHALLRSNTAALHLLTLHNIAYQMKLMGSIRESIVQRRFPEFVREFMERMYGGRGGAPPWAREALGSVGILLD
SIO_010081: QTRT1
subclass of: SO_0000673
so part of: QTRT1
location: complement(join(476716..476868,476972..477056,477147..477256,477368..477443,477532..477670,480455..480570,481640..481718,482049..482187,482282..482350,482545..482781))
location: region:476716-482781:-1
so has part: feature:482545-482781:-1:exon
so has part: feature:482282-482350:-1:exon
so has part: feature:482049-482187:-1:exon
so has part: feature:481640-481718:-1:exon
so has part: feature:480455-480570:-1:exon
so has part: feature:477532-477670:-1:exon
so has part: feature:477368-477443:-1:exon
so has part: feature:477147-477256:-1:exon
so has part: feature:476972-477056:-1:exon
so has part: feature:476716-476868:-1:exon

XP_032939665.1
type: Protein
SIO_000068: ncbiprotein

position:476716:-1
position: 476716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482545-482781:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:482282-482350:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:482049-482187:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:481640-481718:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:480455-480570:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:477532-477670:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:477368-477443:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:477147-477256:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:476972-477056:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:476716-476868:-1:exon

DNM2
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: DNM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 483589..539641
location: region:483589-539641:1
so has part: feature:483589-539641:1:exon
subclass of: SO_0000010

117009559
type: Gene
SIO_000068: ncbigene

position:483589:1
position: 483589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539641:1
position: 539641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483589-539641:1:exon

DNM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: DNM2
product: dynamin 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033083805.2
SIO_010081: DNM2
subclass of: SO_0000673
so part of: DNM2
location: join(483589..483826,493047..493120,498279..498428,500458..500661,504181..504279,507064..507224,507294..507436,508767..508902,511050..511117,513052..513190,514786..514872,516062..516133,519008..519059,521971..521982,525927..525968,527511..527585,528706..528816,531189..531300,533317..533481,534567..534794,536492..536742,538787..539641)
location: region:483589-539641:1
so has part: feature:483589-483826:1:exon
so has part: feature:493047-493120:1:exon
so has part: feature:498279-498428:1:exon
so has part: feature:500458-500661:1:exon
so has part: feature:504181-504279:1:exon
so has part: feature:507064-507224:1:exon
so has part: feature:507294-507436:1:exon
so has part: feature:508767-508902:1:exon
so has part: feature:511050-511117:1:exon
so has part: feature:513052-513190:1:exon
so has part: feature:514786-514872:1:exon
so has part: feature:516062-516133:1:exon
so has part: feature:519008-519059:1:exon
so has part: feature:521971-521982:1:exon
so has part: feature:525927-525968:1:exon
so has part: feature:527511-527585:1:exon
so has part: feature:528706-528816:1:exon
so has part: feature:531189-531300:1:exon
so has part: feature:533317-533481:1:exon
so has part: feature:534567-534794:1:exon
so has part: feature:536492-536742:1:exon
so has part: feature:538787-539641:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:483589-483826:1:exon

position:483826:1
position: 483826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:493047-493120:1:exon

position:493047:1
position: 493047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493120:1
position: 493120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:498279-498428:1:exon

position:498279:1
position: 498279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498428:1
position: 498428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:500458-500661:1:exon

position:500458:1
position: 500458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500661:1
position: 500661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:504181-504279:1:exon

position:504181:1
position: 504181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504279:1
position: 504279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:507064-507224:1:exon

position:507064:1
position: 507064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507224:1
position: 507224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:507294-507436:1:exon

position:507294:1
position: 507294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507436:1
position: 507436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:508767-508902:1:exon

position:508767:1
position: 508767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508902:1
position: 508902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:511050-511117:1:exon

position:511050:1
position: 511050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511117:1
position: 511117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:513052-513190:1:exon

position:513052:1
position: 513052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513190:1
position: 513190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:514786-514872:1:exon

position:514786:1
position: 514786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514872:1
position: 514872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:516062-516133:1:exon

position:516062:1
position: 516062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516133:1
position: 516133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:519008-519059:1:exon

position:519008:1
position: 519008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519059:1
position: 519059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:521971-521982:1:exon

position:521971:1
position: 521971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521982:1
position: 521982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:525927-525968:1:exon

position:525927:1
position: 525927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525968:1
position: 525968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:527511-527585:1:exon

position:527511:1
position: 527511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527585:1
position: 527585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:528706-528816:1:exon

position:528706:1
position: 528706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528816:1
position: 528816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:531189-531300:1:exon

position:531189:1
position: 531189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531300:1
position: 531300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:533317-533481:1:exon

position:533317:1
position: 533317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533481:1
position: 533481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:534567-534794:1:exon

position:534567:1
position: 534567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534794:1
position: 534794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:536492-536742:1:exon

position:536492:1
position: 536492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536742:1
position: 536742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:538787-539641:1:exon

position:538787:1
position: 538787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DNM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: DNM2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: dynamin-2
translation: MGNRGMEELIPLVNKLQDAFSSIGQSCHLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLILQLIFSKTEYAEFLHCKSRRFTDFEEVRQEIEAETERLTGTNKGISAVPINLRVYSPHVLNLTLIDLPGITKVPVGDQPQDIEQQIRDMILQFISRDSSLILAVTPANVDLANSDALKMAKEVDPQGLRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYIGVVNRSQKDIDGRKDIRAALAAERKFFLSHPAYRHMAERMGTPHLQRVLNQQLTNHIRETLPALRSKLQSQLLSLEKDVQEYKNFRPDDPARKTKALLQMVQQFGVDFEKRIEGSGDQVDTLELSGGARINRIFHERFPFELVKMEFDEKDLRREISYAIKNIHGVRTGLFTPDLAFEAIVKKQVVKLKEPCLKCVDLVIQELINTVRQCTSKLGSYPRLREETERIVTTHIREREGKTKDQILLLIDIELSYINTNHEDFIGFANAQQRNTQANKKRAIPNQGEILVIRRGWLTINNISWHLKGGSKEYWFVLTAESLSWYKDEEEKEKKYMLPLDNLKIRDVEKGFMSTKHVFAIFNTEQRNVYKDLRQIELACDSQEDVDSWKASFLRAGVYPEKDQTESEEGAQENTFSMDPQLERQVETIRNLVDSYVGIINKSIRDLMPKTIMHLMINNTKDFIHSELLAFLYSGSDQASLMEESPEQAQRRXEMLRMYHALREALAIIGDISTSTVSTPXPPPVDDTWLQPGGPHSPPPQRRPPSALPPPGRPPSLRAAAPGPPPLLLPCPGGAXAPFAAPPIPSRLGPWAPSDPFTAPPQIPARPARVPPGIPPGVPRRPPAAPNRPTIIRPAEPSLLINPRGLLGSAGIHWGLGLTGSGGSREICGICGINWISELDGICGIHQIHGINVIYRIHRVCGIHRIHRVIGTPPYPGIIGIHGIIGTYGINWTYGINWDLWDPTPPGRKNRPQAQPELLELIPGADPKSWG
SIO_010081: DNM2
subclass of: SO_0000673
so part of: DNM2
location: join(483666..483826,493047..493120,498279..498428,500458..500661,504181..504279,507064..507224,507294..507436,508767..508902,511050..511117,513052..513190,514786..514872,516062..516133,519008..519059,521971..521982,525927..525968,527511..527585,528706..528816,531189..531300,533317..533481,534567..534794,536492..536742,538787..539243)
location: region:483666-539243:1
so has part: feature:483666-483826:1:exon
so has part: feature:493047-493120:1:exon
so has part: feature:498279-498428:1:exon
so has part: feature:500458-500661:1:exon
so has part: feature:504181-504279:1:exon
so has part: feature:507064-507224:1:exon
so has part: feature:507294-507436:1:exon
so has part: feature:508767-508902:1:exon
so has part: feature:511050-511117:1:exon
so has part: feature:513052-513190:1:exon
so has part: feature:514786-514872:1:exon
so has part: feature:516062-516133:1:exon
so has part: feature:519008-519059:1:exon
so has part: feature:521971-521982:1:exon
so has part: feature:525927-525968:1:exon
so has part: feature:527511-527585:1:exon
so has part: feature:528706-528816:1:exon
so has part: feature:531189-531300:1:exon
so has part: feature:533317-533481:1:exon
so has part: feature:534567-534794:1:exon
so has part: feature:536492-536742:1:exon
so has part: feature:538787-539243:1:exon

XP_032939696.1
type: Protein
SIO_000068: ncbiprotein

position:483666:1
position: 483666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539243:1
position: 539243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483666-483826:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:493047-493120:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:498279-498428:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:500458-500661:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:504181-504279:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:507064-507224:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:507294-507436:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:508767-508902:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:511050-511117:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:513052-513190:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:514786-514872:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:516062-516133:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:519008-519059:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:521971-521982:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:525927-525968:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:527511-527585:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:528706-528816:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:531189-531300:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:533317-533481:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:534567-534794:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:536492-536742:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:538787-539243:1:exon

LOC117009445
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009445
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 543417..544040
location: region:543417-544040:1
so has part: feature:543417-544040:1:exon
subclass of: SO_0000010

117009445
type: Gene
SIO_000068: ncbigene

position:543417:1
position: 543417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544040:1
position: 544040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:543417-544040:1:exon

LOC117009445
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009445
product: sulfated surface glycoprotein 185-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 65% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033083679.1
SIO_010081: LOC117009445
subclass of: SO_0000673
so part of: LOC117009445
location: join(543417..543780,543856..544040)
location: region:543417-544040:1
so has part: feature:543417-543780:1:exon
so has part: feature:543856-544040:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:543417-543780:1:exon

position:543780:1
position: 543780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:543856-544040:1:exon

position:543856:1
position: 543856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117009445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009445
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sulfated surface glycoprotein 185-like
translation: MIPPGFSEFPPRFPPGFPGFPGFPPPSPPSPRRPPRLLPAPLLLQLPPAPGPPRLRCLAPRRFPGSTFELFQGTPELPVWSVPAAPDQHWAEFPAAGAARCWRCRYRSHNGSAWLESELSPDLGDAECQRGDGVATGAAPMAGTTRDGNGNENGNGNGTGTVLGSLSCSWGWILGLDPSAGS
SIO_010081: LOC117009445
subclass of: SO_0000673
so part of: LOC117009445
location: join(543417..543780,543856..544040)
location: region:543417-544040:1
so has part: feature:543417-543780:1:exon
so has part: feature:543856-544040:1:exon

XP_032939570.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:543417-543780:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:543856-544040:1:exon

LOC117009560
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009560
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 545139..546671
location: region:545139-546671:1
so has part: feature:545139-546671:1:exon
subclass of: SO_0000011

117009560
type: Gene
SIO_000068: ncbigene

position:545139:1
position: 545139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546671:1
position: 546671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:545139-546671:1:exon

LOC117009560
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117009560
product: uncharacterized LOC117009560
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004420495.1
SIO_010081: LOC117009560
subclass of: SO_0000673
so part of: LOC117009560
location: join(545139..545222,546494..546534,546634..546671)
location: region:545139-546671:1
so has part: feature:545139-545222:1:exon
so has part: feature:546494-546534:1:exon
so has part: feature:546634-546671:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:545139-545222:1:exon

position:545222:1
position: 545222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:546494-546534:1:exon

position:546494:1
position: 546494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546534:1
position: 546534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:546634-546671:1:exon

position:546634:1
position: 546634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CARM1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: CARM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 549070..578629
location: region:549070-578629:1
so has part: feature:549070-578629:1:exon
subclass of: SO_0000010

117009446
type: Gene
SIO_000068: ncbigene

position:549070:1
position: 549070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578629:1
position: 578629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549070-578629:1:exon

CARM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CARM1
product: coactivator associated arginine methyltransferase 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 3 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 66% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033083680.1
SIO_010081: CARM1
subclass of: SO_0000673
so part of: CARM1
location: join(549070..549213,553307..553432,555064..555168,562129..562233,564749..564860,567443..567619,570793..570881,570993..571018,573777..573858,575670..575755,576756..576845,576921..577058,578596..578629)
location: region:549070-578629:1
so has part: feature:549070-549213:1:exon
so has part: feature:553307-553432:1:exon
so has part: feature:555064-555168:1:exon
so has part: feature:562129-562233:1:exon
so has part: feature:564749-564860:1:exon
so has part: feature:567443-567619:1:exon
so has part: feature:570793-570881:1:exon
so has part: feature:570993-571018:1:exon
so has part: feature:573777-573858:1:exon
so has part: feature:575670-575755:1:exon
so has part: feature:576756-576845:1:exon
so has part: feature:576921-577058:1:exon
so has part: feature:578596-578629:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:549070-549213:1:exon

position:549213:1
position: 549213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:553307-553432:1:exon

position:553307:1
position: 553307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553432:1
position: 553432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:555064-555168:1:exon

position:555064:1
position: 555064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555168:1
position: 555168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:562129-562233:1:exon

position:562129:1
position: 562129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562233:1
position: 562233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:564749-564860:1:exon

position:564749:1
position: 564749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564860:1
position: 564860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:567443-567619:1:exon

position:567443:1
position: 567443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567619:1
position: 567619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:570793-570881:1:exon

position:570793:1
position: 570793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570881:1
position: 570881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:570993-571018:1:exon

position:570993:1
position: 570993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571018:1
position: 571018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:573777-573858:1:exon

position:573777:1
position: 573777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573858:1
position: 573858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:575670-575755:1:exon

position:575670:1
position: 575670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575755:1
position: 575755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:576756-576845:1:exon

position:576756:1
position: 576756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576845:1
position: 576845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:576921-577058:1:exon

position:576921:1
position: 576921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577058:1
position: 577058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:578596-578629:1:exon

position:578596:1
position: 578596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CARM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CARM1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 3 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: histone-arginine methyltransferase CARM1
translation: MAAVSVXPGVRLLTVGDANGEIQRHQEQQPLRLEVRTGPDSAAIALYGHEDLCVFKCSVSRDTECSRVGKQSFIITLGCNSVLLQFGTPNDFCSFYNILKNCRXAQHGALVFSERTEESSAVQYFQFYGYLSQQQNMMQDYVRTGTYQRAILQNHSDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTERIXVIPGKVEEVSLPEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPTGNMFPTIGDVHLAPFTDEQLYMGSSPRPTSSQFTKANFWYQPSFHGVDLSALRGAAVDEYFRQPVVDTFDIRILMAKSVKYTVNFLEAKEGDLHRIEIPFKFHMLHSGLVHGLAFWFDVAFIGSIMTVWLSTAPTEPLTHWYQVRCLFQSPLFAKAGDTLSGTCLLIANKRVSYGVHGSMK
SIO_010081: CARM1
subclass of: SO_0000673
so part of: CARM1
location: join(549070..549213,553307..553432,555064..555168,562129..562233,564749..564860,567443..567619,570793..570881,570993..571018,573777..573858,575670..575755,576756..576845,576921..577058,578596..578629)
location: region:549070-578629:1
so has part: feature:549070-549213:1:exon
so has part: feature:553307-553432:1:exon
so has part: feature:555064-555168:1:exon
so has part: feature:562129-562233:1:exon
so has part: feature:564749-564860:1:exon
so has part: feature:567443-567619:1:exon
so has part: feature:570793-570881:1:exon
so has part: feature:570993-571018:1:exon
so has part: feature:573777-573858:1:exon
so has part: feature:575670-575755:1:exon
so has part: feature:576756-576845:1:exon
so has part: feature:576921-577058:1:exon
so has part: feature:578596-578629:1:exon

XP_032939571.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:549070-549213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:553307-553432:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555064-555168:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:562129-562233:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:564749-564860:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:567443-567619:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:570793-570881:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:570993-571018:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:573777-573858:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:575670-575755:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:576756-576845:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:576921-577058:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:578596-578629:1:exon

MAST1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: MAST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 578653..602590
location: region:578653-602590:1
so has part: feature:578653-602590:1:exon
subclass of: SO_0000010

117009448
type: Gene
SIO_000068: ncbigene

position:578653:1
position: 578653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602590:1
position: 602590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578653-602590:1:exon

MAST1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: MAST1
product: microtubule associated serine/threonine kinase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033083681.2
SIO_010081: MAST1
subclass of: SO_0000673
so part of: MAST1
location: join(578653..578665,579061..579359,581729..581830,582701..582824,583536..583603,583705..583790,586247..586455,587167..587305,588583..588715,590007..590172,591723..591824,593006..593128,594542..594651,595656..595774,595865..596037,596110..596277,598582..598814,600512..600634,600733..600869,600953..601095,601383..602590)
location: region:578653-602590:1
so has part: feature:578653-578665:1:exon
so has part: feature:579061-579359:1:exon
so has part: feature:581729-581830:1:exon
so has part: feature:582701-582824:1:exon
so has part: feature:583536-583603:1:exon
so has part: feature:583705-583790:1:exon
so has part: feature:586247-586455:1:exon
so has part: feature:587167-587305:1:exon
so has part: feature:588583-588715:1:exon
so has part: feature:590007-590172:1:exon
so has part: feature:591723-591824:1:exon
so has part: feature:593006-593128:1:exon
so has part: feature:594542-594651:1:exon
so has part: feature:595656-595774:1:exon
so has part: feature:595865-596037:1:exon
so has part: feature:596110-596277:1:exon
so has part: feature:598582-598814:1:exon
so has part: feature:600512-600634:1:exon
so has part: feature:600733-600869:1:exon
so has part: feature:600953-601095:1:exon
so has part: feature:601383-602590:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:578653-578665:1:exon

position:578665:1
position: 578665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:579061-579359:1:exon

position:579061:1
position: 579061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579359:1
position: 579359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:581729-581830:1:exon

position:581729:1
position: 581729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:581830:1
position: 581830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:582701-582824:1:exon

position:582701:1
position: 582701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:582824:1
position: 582824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:583536-583603:1:exon

position:583536:1
position: 583536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583603:1
position: 583603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:583705-583790:1:exon

position:583705:1
position: 583705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583790:1
position: 583790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:586247-586455:1:exon

position:586247:1
position: 586247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586455:1
position: 586455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:587167-587305:1:exon

position:587167:1
position: 587167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:587305:1
position: 587305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:588583-588715:1:exon

position:588583:1
position: 588583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:588715:1
position: 588715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:590007-590172:1:exon

position:590007:1
position: 590007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:590172:1
position: 590172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:591723-591824:1:exon

position:591723:1
position: 591723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591824:1
position: 591824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:593006-593128:1:exon

position:593006:1
position: 593006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:593128:1
position: 593128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:594542-594651:1:exon

position:594542:1
position: 594542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594651:1
position: 594651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:595656-595774:1:exon

position:595656:1
position: 595656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595774:1
position: 595774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:595865-596037:1:exon

position:595865:1
position: 595865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596037:1
position: 596037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:596110-596277:1:exon

position:596110:1
position: 596110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596277:1
position: 596277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:598582-598814:1:exon

position:598582:1
position: 598582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598814:1
position: 598814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:600512-600634:1:exon

position:600512:1
position: 600512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600634:1
position: 600634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:600733-600869:1:exon

position:600733:1
position: 600733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600869:1
position: 600869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:600953-601095:1:exon

position:600953:1
position: 600953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601095:1
position: 601095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:601383-602590:1:exon

position:601383:1
position: 601383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAST1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: MAST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule-associated serine/threonine-protein kinase 1
translation: MGPWAPWPPSPPPWPPSLALWPPSPPSWPPLSPPQASAQMQERLEEFVRGCGPGGTPLADGALSFIQHQLAELARDCLAKARHGLVTAGYFCELQENMERLLQDAYERSESEEVAFITQLVKRLLIIISRPARLLECLEFDPAGLSQLLAAAPGRAEGPLRADTPRYLLRQLGRARGLTDVLHLEEPDSSGTNTPDPEEGAEGRAAAPRPKEPPGESDFETIKLISNGAYGAVYLVRHTATRQRFAMKKINKQNLLLRNQVHQAFVERDILTFAENPFVVSMFCSFQTRRHLCMVMEYVEGGDCATLLKHIGALPLELARLYFAETVLALEYLHTYGIVHRDLKPDNLLITSLGHVKLTDFGLSKMGLMSLTTNLYEGHMEKDAREFRDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIVLYEFLVGCVPFFGDTPEELFGQVISDEILWPEGDEALPPDAQHLISCLLQPDPLRRLGAGGAQEVKAHGFFAALDWTGLLRQKAEFVPHLESEEDTSYFDTRSDRYPHVTSYEDEDTTEDEPVEIRQFSSCSPRFSKVYSSLEQLSQEPKPKGRPRDEGRRDGFTRERGWRTGSPELKHRSAGEGAPPEGEGSPPPGARRRFSALLEPARPGGAPEERRNGGREGPPEGGSEEPARAGELPPARTELGLRRPRHPGVAPAEGGGDKRSPRAPGKVTKSASATALSVIIPSGEAPGSSPLGSPMSPRSLSSDPSSRDSSPGRELAPAVAAPPRSPIAIPRPGKKFGFTLRAIRVYLGDSDVYSVHHVVWHVEEGGPAQEAGLCAGDLITHVNGEPVHGLVHTEVVELILKSGTKVLVTTTPLENTSIRLGPARRRSARAKMARRNRRGGTGSGHERRRSALFRHLARQASLLHTSRSLTSLSRSLSSSDSLPASPTHARARDPGASPPSSSPGSSAPPSPAGPHLRPSSLQGLSPKLQRQYRAARCRSAGSIPLSPLAHTPSPPAASPPAFPAKLHPKAAESPRLARRGLPEKAAPGPPRKLGLEPPRKDFPAEPPLQSLAEWDGEGPAEPPPPAPPARRLGRQELPLLLGGPPGAEPPPPREPEEPERGARGPPKTLSPVQEHERGGAAPGGPPVPIVVVGPGATPGDPRSAAGPPGR
SIO_010081: MAST1
subclass of: SO_0000673
so part of: MAST1
location: join(578653..578665,579061..579359,581729..581830,582701..582824,583536..583603,583705..583790,586247..586455,587167..587305,588583..588715,590007..590172,591723..591824,593006..593128,594542..594651,595656..595774,595865..596037,596110..596277,598582..598814,600512..600634,600733..600869,600953..601095,601383..602032)
location: region:578653-602032:1
so has part: feature:578653-578665:1:exon
so has part: feature:579061-579359:1:exon
so has part: feature:581729-581830:1:exon
so has part: feature:582701-582824:1:exon
so has part: feature:583536-583603:1:exon
so has part: feature:583705-583790:1:exon
so has part: feature:586247-586455:1:exon
so has part: feature:587167-587305:1:exon
so has part: feature:588583-588715:1:exon
so has part: feature:590007-590172:1:exon
so has part: feature:591723-591824:1:exon
so has part: feature:593006-593128:1:exon
so has part: feature:594542-594651:1:exon
so has part: feature:595656-595774:1:exon
so has part: feature:595865-596037:1:exon
so has part: feature:596110-596277:1:exon
so has part: feature:598582-598814:1:exon
so has part: feature:600512-600634:1:exon
so has part: feature:600733-600869:1:exon
so has part: feature:600953-601095:1:exon
so has part: feature:601383-602032:1:exon

XP_032939572.1
type: Protein
SIO_000068: ncbiprotein

position:602032:1
position: 602032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578653-578665:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:579061-579359:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581729-581830:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:582701-582824:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:583536-583603:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:583705-583790:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:586247-586455:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:587167-587305:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:588583-588715:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:590007-590172:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:591723-591824:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:593006-593128:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:594542-594651:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:595656-595774:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:595865-596037:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:596110-596277:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:598582-598814:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:600512-600634:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:600733-600869:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:600953-601095:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:601383-602032:1:exon

GCDH
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: GCDH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 602771..609486
location: region:602771-609486:1
so has part: feature:602771-609486:1:exon
subclass of: SO_0000010

117009580
type: Gene
SIO_000068: ncbigene

position:602771:1
position: 602771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:609486:1
position: 609486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:602771-609486:1:exon

GCDH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: GCDH
product: glutaryl-CoA dehydrogenase, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083841.2
SIO_010081: GCDH
subclass of: SO_0000673
so part of: GCDH
location: join(602771..603003,603232..603304,603397..603537,604183..604245,607671..607841,607934..608063,608141..608360,608443..608546,608637..608762,608847..609007,609083..609486)
location: region:602771-609486:1
so has part: feature:602771-603003:1:exon
so has part: feature:603232-603304:1:exon
so has part: feature:603397-603537:1:exon
so has part: feature:604183-604245:1:exon
so has part: feature:607671-607841:1:exon
so has part: feature:607934-608063:1:exon
so has part: feature:608141-608360:1:exon
so has part: feature:608443-608546:1:exon
so has part: feature:608637-608762:1:exon
so has part: feature:608847-609007:1:exon
so has part: feature:609083-609486:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:602771-603003:1:exon

position:603003:1
position: 603003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:603232-603304:1:exon

position:603232:1
position: 603232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603304:1
position: 603304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:603397-603537:1:exon

position:603397:1
position: 603397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603537:1
position: 603537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:604183-604245:1:exon

position:604183:1
position: 604183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604245:1
position: 604245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:607671-607841:1:exon

position:607671:1
position: 607671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607841:1
position: 607841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:607934-608063:1:exon

position:607934:1
position: 607934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608063:1
position: 608063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:608141-608360:1:exon

position:608141:1
position: 608141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608360:1
position: 608360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:608443-608546:1:exon

position:608443:1
position: 608443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608546:1
position: 608546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:608637-608762:1:exon

position:608637:1
position: 608637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608762:1
position: 608762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:608847-609007:1:exon

position:608847:1
position: 608847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:609007:1
position: 609007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:609083-609486:1:exon

position:609083:1
position: 609083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GCDH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: GCDH
product: glutaryl-CoA dehydrogenase, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083842.2
SIO_010081: GCDH
subclass of: SO_0000673
so part of: GCDH
location: join(602941..602976,603232..603304,603397..603537,604183..604245,607671..607841,607934..608063,608141..608360,608443..608546,608637..608762,608847..609007,609083..609486)
location: region:602941-609486:1
so has part: feature:602941-602976:1:exon
so has part: feature:603232-603304:1:exon
so has part: feature:603397-603537:1:exon
so has part: feature:604183-604245:1:exon
so has part: feature:607671-607841:1:exon
so has part: feature:607934-608063:1:exon
so has part: feature:608141-608360:1:exon
so has part: feature:608443-608546:1:exon
so has part: feature:608637-608762:1:exon
so has part: feature:608847-609007:1:exon
so has part: feature:609083-609486:1:exon

position:602941:1
position: 602941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:602941-602976:1:exon

position:602976:1
position: 602976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:603232-603304:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:603397-603537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:604183-604245:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:607671-607841:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:607934-608063:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:608141-608360:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:608443-608546:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:608637-608762:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:608847-609007:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:609083-609486:1:exon

GCDH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: GCDH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutaryl-CoA dehydrogenase, mitochondrial
translation: MALRLAPPVLRLARSGVRWRGTVPPQFDWQDALGLEGLLSAEERLLRDTTRKYCQERLLPRVLQANRHEVFDREIVTELGELGLLGPTIQGYGCAGTTSVGYGLVTRELERVDSSYRSVLSVQSSLVMYPLWAYGTPAQRERFLPRLARGEIVGCFGLTEPNHGSDPGGMETRARHNPSAKSYTLRGSKTWITNSPIADLCVVWARCEEDGRVRGFLVERGTPGLSTPKIEGKFSLRASTTGMIVLDDVEVPEENVLPKAEGLGGPFGCLTQARYGIAWGALGAAEACLETARQYVLDRKQFGGPLARNQLVQKKLADMVTEITLGLHACLRLGRLKDEGKAAPEMVSMLKRNSCGKALAIARDARDMLGGNGICDEFHVIRHLINLEAVNTYEGTHDIHALILGRAITGIQAFAPPKGT
SIO_010081: GCDH
subclass of: SO_0000673
so part of: GCDH
location: join(603238..603304,603397..603537,604183..604245,607671..607841,607934..608063,608141..608360,608443..608546,608637..608762,608847..609007,609083..609162)
location: region:603238-609162:1
so has part: feature:603238-603304:1:exon
so has part: feature:603397-603537:1:exon
so has part: feature:604183-604245:1:exon
so has part: feature:607671-607841:1:exon
so has part: feature:607934-608063:1:exon
so has part: feature:608141-608360:1:exon
so has part: feature:608443-608546:1:exon
so has part: feature:608637-608762:1:exon
so has part: feature:608847-609007:1:exon
so has part: feature:609083-609162:1:exon

XP_032939732.1
type: Protein
SIO_000068: ncbiprotein

position:603238:1
position: 603238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:609162:1
position: 609162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603238-603304:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:603397-603537:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:604183-604245:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:607671-607841:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:607934-608063:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:608141-608360:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:608443-608546:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:608637-608762:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:608847-609007:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:609083-609162:1:exon

GCDH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: GCDH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutaryl-CoA dehydrogenase, mitochondrial
translation: MALRLAPPVLRLARSGVRWRGTVPPQFDWQDALGLEGLLSAEERLLRDTTRKYCQERLLPRVLQANRHEVFDREIVTELGELGLLGPTIQGYGCAGTTSVGYGLVTRELERVDSSYRSVLSVQSSLVMYPLWAYGTPAQRERFLPRLARGEIVGCFGLTEPNHGSDPGGMETRARHNPSAKSYTLRGSKTWITNSPIADLCVVWARCEEDGRVRGFLVERGTPGLSTPKIEGKFSLRASTTGMIVLDDVEVPEENVLPKAEGLGGPFGCLTQARYGIAWGALGAAEACLETARQYVLDRKQFGGPLARNQLVQKKLADMVTEITLGLHACLRLGRLKDEGKAAPEMVSMLKRNSCGKALAIARDARDMLGGNGICDEFHVIRHLINLEAVNTYEGTHDIHALILGRAITGIQAFAPPKGT
SIO_010081: GCDH
subclass of: SO_0000673
so part of: GCDH
location: join(603238..603304,603397..603537,604183..604245,607671..607841,607934..608063,608141..608360,608443..608546,608637..608762,608847..609007,609083..609162)
location: region:603238-609162:1
so has part: feature:603238-603304:1:exon
so has part: feature:603397-603537:1:exon
so has part: feature:604183-604245:1:exon
so has part: feature:607671-607841:1:exon
so has part: feature:607934-608063:1:exon
so has part: feature:608141-608360:1:exon
so has part: feature:608443-608546:1:exon
so has part: feature:608637-608762:1:exon
so has part: feature:608847-609007:1:exon
so has part: feature:609083-609162:1:exon

XP_032939733.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:603238-603304:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:603397-603537:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:604183-604245:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:607671-607841:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:607934-608063:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:608141-608360:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:608443-608546:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:608637-608762:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:608847-609007:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:609083-609162:1:exon

SYCE2
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: SYCE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(609568..612178)
location: region:609568-612178:-1
so has part: feature:609568-612178:-1:exon
subclass of: SO_0000010

117009585
type: Gene
SIO_000068: ncbigene

position:609568:-1
position: 609568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612178:-1
position: 612178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609568-612178:-1:exon

SYCE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SYCE2
product: synaptonemal complex central element protein 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083848.1
SIO_010081: SYCE2
subclass of: SO_0000673
so part of: SYCE2
location: complement(join(609568..609902,610427..610598,611569..612178))
location: region:609568-612178:-1
so has part: feature:611569-612178:-1:exon
so has part: feature:610427-610598:-1:exon
so has part: feature:609568-609902:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:611569-612178:-1:exon

position:611569:-1
position: 611569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:610427-610598:-1:exon

position:610427:-1
position: 610427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610598:-1
position: 610598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:609568-609902:-1:exon

position:609902:-1
position: 609902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SYCE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SYCE2
product: synaptonemal complex central element protein 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083847.1
SIO_010081: SYCE2
subclass of: SO_0000673
so part of: SYCE2
location: complement(join(609568..609902,610427..610746))
location: region:609568-610746:-1
so has part: feature:610427-610746:-1:exon
so has part: feature:609568-609902:-1:exon

position:610746:-1
position: 610746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:610427-610746:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609568-609902:-1:exon

SYCE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SYCE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptonemal complex central element protein 2 isoform X2
translation: MSREEPESPEPEEAAGDGPVPSELSGDEPQGKDPDRPRAEPALGHRSSLYFASLGATIDGLQQQARDICNRVTESRQEDQTVLNSFRESLLLKVLKLAEQLEERLFRSYDSYNKLIEERLQELSEVLERVEGVQAELRCICCTIEAAYQDLCLQPEP
SIO_010081: SYCE2
subclass of: SO_0000673
so part of: SYCE2
location: complement(join(609708..609902,610427..610598,611569..611675))
location: region:609708-611675:-1
so has part: feature:611569-611675:-1:exon
so has part: feature:610427-610598:-1:exon
so has part: feature:609708-609902:-1:exon

XP_032939739.1
type: Protein
SIO_000068: ncbiprotein

position:609708:-1
position: 609708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611675:-1
position: 611675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:611569-611675:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:610427-610598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:609708-609902:-1:exon

SYCE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SYCE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptonemal complex central element protein 2 isoform X1
translation: MRSMPLTGGPCPCMTHGEGPSWDGGCIPRTEGPEFRPRPRAEPALGHRSSLYFASLGATIDGLQQQARDICNRVTESRQEDQTVLNSFRESLLLKVLKLAEQLEERLFRSYDSYNKLIEERLQELSEVLERVEGVQAELRCICCTIEAAYQDLCLQPEP
SIO_010081: SYCE2
subclass of: SO_0000673
so part of: SYCE2
location: complement(join(609708..609902,610427..610711))
location: region:609708-610711:-1
so has part: feature:610427-610711:-1:exon
so has part: feature:609708-609902:-1:exon

XP_032939738.1
type: Protein
SIO_000068: ncbiprotein

position:610711:-1
position: 610711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:610427-610711:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609708-609902:-1:exon

FARSA
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: FARSA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(612333..618129)
location: region:612333-618129:-1
so has part: feature:612333-618129:-1:exon
subclass of: SO_0000010

117009579
type: Gene
SIO_000068: ncbigene

position:612333:-1
position: 612333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618129:-1
position: 618129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:612333-618129:-1:exon

FARSA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: FARSA
product: phenylalanyl-tRNA synthetase subunit alpha
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083840.1
SIO_010081: FARSA
subclass of: SO_0000673
so part of: FARSA
location: complement(join(612333..612529,612613..612727,614606..614683,614757..614925,615781..615880,615967..616051,616337..616452,616531..616659,616739..616831,617282..617400,617562..617660,617735..617872,617947..618129))
location: region:612333-618129:-1
so has part: feature:617947-618129:-1:exon
so has part: feature:617735-617872:-1:exon
so has part: feature:617562-617660:-1:exon
so has part: feature:617282-617400:-1:exon
so has part: feature:616739-616831:-1:exon
so has part: feature:616531-616659:-1:exon
so has part: feature:616337-616452:-1:exon
so has part: feature:615967-616051:-1:exon
so has part: feature:615781-615880:-1:exon
so has part: feature:614757-614925:-1:exon
so has part: feature:614606-614683:-1:exon
so has part: feature:612613-612727:-1:exon
so has part: feature:612333-612529:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:617947-618129:-1:exon

position:617947:-1
position: 617947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:617735-617872:-1:exon

position:617735:-1
position: 617735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617872:-1
position: 617872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:617562-617660:-1:exon

position:617562:-1
position: 617562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617660:-1
position: 617660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:617282-617400:-1:exon

position:617282:-1
position: 617282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617400:-1
position: 617400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:616739-616831:-1:exon

position:616739:-1
position: 616739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616831:-1
position: 616831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:616531-616659:-1:exon

position:616531:-1
position: 616531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616659:-1
position: 616659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:616337-616452:-1:exon

position:616337:-1
position: 616337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616452:-1
position: 616452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:615967-616051:-1:exon

position:615967:-1
position: 615967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616051:-1
position: 616051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:615781-615880:-1:exon

position:615781:-1
position: 615781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615880:-1
position: 615880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:614757-614925:-1:exon

position:614757:-1
position: 614757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614925:-1
position: 614925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:614606-614683:-1:exon

position:614606:-1
position: 614606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614683:-1
position: 614683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:612613-612727:-1:exon

position:612613:-1
position: 612613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612727:-1
position: 612727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:612333-612529:-1:exon

position:612529:-1
position: 612529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FARSA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: FARSA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phenylalanine--tRNA ligase alpha subunit
translation: MAPSVAERLLERLDQPGASGGLCSIQAAAELGVDHQTLVGAVKSLQALGEVIEAEARTATRWELSPEGEEVLRDGSPEVRLFRSLPEEGLPQGEAMKLPGGSLGFSKAMANKWVRLDKGAPGGPRVLRAVPSVQDTVQEHLGQVRTGGAQAVPERDRSELKRRKLLLEMTLKSYWIRKGSAFSTAVARPETELTPEMIATGSWRQLPFKPYNFSSLGLPPACGHLHPLLKVRSELRQIFLEMGFTEMRTDNFVESSFWNFDALFQPQQHPARDQHDTFFLLDPAEAPQLPPGYYNKVKKVHSQGGYGSQGYRYEWKVEEARKNLLRTHTTSASARALFQLARQEKFTPVKYFSIDRVFRNESLDATHLAEFHQVEGVVADRGLTLGHLMGTLRQFFTKLGISQLRFKPAYNPYTEPSMEVFSYHEGLKKWVEVGNSGVFRPELLLPMGLPENVTVIAWGLSLERPTMIKYGIKNIRELMGHRVNLQMVYDSPMCRLDV
SIO_010081: FARSA
subclass of: SO_0000673
so part of: FARSA
location: complement(join(612424..612529,612613..612727,614606..614683,614757..614925,615781..615880,615967..616051,616337..616452,616531..616659,616739..616831,617282..617400,617562..617660,617735..617872,617947..618096))
location: region:612424-618096:-1
so has part: feature:617947-618096:-1:exon
so has part: feature:617735-617872:-1:exon
so has part: feature:617562-617660:-1:exon
so has part: feature:617282-617400:-1:exon
so has part: feature:616739-616831:-1:exon
so has part: feature:616531-616659:-1:exon
so has part: feature:616337-616452:-1:exon
so has part: feature:615967-616051:-1:exon
so has part: feature:615781-615880:-1:exon
so has part: feature:614757-614925:-1:exon
so has part: feature:614606-614683:-1:exon
so has part: feature:612613-612727:-1:exon
so has part: feature:612424-612529:-1:exon

XP_032939731.1
type: Protein
SIO_000068: ncbiprotein

position:612424:-1
position: 612424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618096:-1
position: 618096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:617947-618096:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:617735-617872:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:617562-617660:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617282-617400:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:616739-616831:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:616531-616659:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:616337-616452:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:615967-616051:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:615781-615880:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:614757-614925:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:614606-614683:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:612613-612727:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:612424-612529:-1:exon

CALR
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: CALR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 618868..622129
location: region:618868-622129:1
so has part: feature:618868-622129:1:exon
subclass of: SO_0000010

117009582
type: Gene
SIO_000068: ncbigene

position:618868:1
position: 618868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622129:1
position: 622129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618868-622129:1:exon

CALR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CALR
product: calreticulin
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083843.1
SIO_010081: CALR
subclass of: SO_0000673
so part of: CALR
location: join(618868..619026,619940..620041,620129..620332,620423..620517,620601..620810,621079..621192,621273..621416,621499..621591,621674..622129)
location: region:618868-622129:1
so has part: feature:618868-619026:1:exon
so has part: feature:619940-620041:1:exon
so has part: feature:620129-620332:1:exon
so has part: feature:620423-620517:1:exon
so has part: feature:620601-620810:1:exon
so has part: feature:621079-621192:1:exon
so has part: feature:621273-621416:1:exon
so has part: feature:621499-621591:1:exon
so has part: feature:621674-622129:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:618868-619026:1:exon

position:619026:1
position: 619026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:619940-620041:1:exon

position:619940:1
position: 619940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:620041:1
position: 620041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:620129-620332:1:exon

position:620129:1
position: 620129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:620332:1
position: 620332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:620423-620517:1:exon

position:620423:1
position: 620423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:620517:1
position: 620517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:620601-620810:1:exon

position:620601:1
position: 620601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:620810:1
position: 620810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:621079-621192:1:exon

position:621079:1
position: 621079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:621192:1
position: 621192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:621273-621416:1:exon

position:621273:1
position: 621273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:621416:1
position: 621416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:621499-621591:1:exon

position:621499:1
position: 621499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:621591:1
position: 621591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:621674-622129:1:exon

position:621674:1
position: 621674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CALR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CALR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calreticulin
translation: MSPLSVLAPVLFGALLAAAGPTQFFREEFGDGDAWTRRWVESKHKPDYGRFVLTAGKFYGDAEKDKGIQTSQDARFYALSSRFEPFSNRDKTLVVQFTVKHEQNIDCGGGYVKLFPASLNQEDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLVVRLDNTYEVKIDNARVESGSLEEDWDFLPPKKIKDPEAKKPDDWDERAKIDDPEDTKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWRPQQIDNPNYKGKWVHPEIDNPEYSPDPLLYSYDSFGVIGLDLWQVKSGTIFDNFLITDDEKLAEEIGNETWGATKDAERKMKEQQDEEQRKKQEEEEKQQKEEEGDDDGDGDEEEEDEEEPEAEPEEVEAAPRDEL
SIO_010081: CALR
subclass of: SO_0000673
so part of: CALR
location: join(618930..619026,619940..620041,620129..620332,620423..620517,620601..620810,621079..621192,621273..621416,621499..621591,621674..621859)
location: region:618930-621859:1
so has part: feature:618930-619026:1:exon
so has part: feature:619940-620041:1:exon
so has part: feature:620129-620332:1:exon
so has part: feature:620423-620517:1:exon
so has part: feature:620601-620810:1:exon
so has part: feature:621079-621192:1:exon
so has part: feature:621273-621416:1:exon
so has part: feature:621499-621591:1:exon
so has part: feature:621674-621859:1:exon

XP_032939734.1
type: Protein
SIO_000068: ncbiprotein

position:618930:1
position: 618930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:621859:1
position: 621859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618930-619026:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:619940-620041:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:620129-620332:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:620423-620517:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:620601-620810:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:621079-621192:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:621273-621416:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:621499-621591:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:621674-621859:1:exon

RAD23A
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: RAD23A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 622421..635253
location: region:622421-635253:1
so has part: feature:622421-635253:1:exon
subclass of: SO_0000010

117009583
type: Gene
SIO_000068: ncbigene

position:622421:1
position: 622421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635253:1
position: 635253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622421-635253:1:exon

RAD23A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: RAD23A
product: RAD23 homolog A, nucleotide excision repair protein
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083844.2
SIO_010081: RAD23A
subclass of: SO_0000673
so part of: RAD23A
location: join(622421..622604,624718..624879,626134..626294,627929..627984,628819..628946,630586..630661,631658..631788,632742..632897,634798..635253)
location: region:622421-635253:1
so has part: feature:622421-622604:1:exon
so has part: feature:624718-624879:1:exon
so has part: feature:626134-626294:1:exon
so has part: feature:627929-627984:1:exon
so has part: feature:628819-628946:1:exon
so has part: feature:630586-630661:1:exon
so has part: feature:631658-631788:1:exon
so has part: feature:632742-632897:1:exon
so has part: feature:634798-635253:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:622421-622604:1:exon

position:622604:1
position: 622604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:624718-624879:1:exon

position:624718:1
position: 624718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:624879:1
position: 624879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:626134-626294:1:exon

position:626134:1
position: 626134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:626294:1
position: 626294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:627929-627984:1:exon

position:627929:1
position: 627929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627984:1
position: 627984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:628819-628946:1:exon

position:628819:1
position: 628819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:628946:1
position: 628946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:630586-630661:1:exon

position:630586:1
position: 630586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:630661:1
position: 630661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:631658-631788:1:exon

position:631658:1
position: 631658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631788:1
position: 631788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:632742-632897:1:exon

position:632742:1
position: 632742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632897:1
position: 632897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:634798-635253:1:exon

position:634798:1
position: 634798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAD23A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: RAD23A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UV excision repair protein RAD23 homolog A
translation: MLWGRREEPPPPRPRPAMAVTVTLKTLQQQTFKIRMEPHETVRALKEKIEAEKGSDAFPVAGQKLIYAGKILSDDVPIREYRIDEKNFVVVMVTKAKSSLGSAPPEVGAPSEPPPGPPPAAAPPPPAAPSEEPPAQEPPALSLAEPPAGSIPPPGSSGRSADAASTLVTGSEYETMLSEIVSMGYERERVVAALRASYNNPHRAVEYLLTGIPGSPEPERPPVQESRPAEQPPPEGENPLEFLREQPQFQNMRQVIQQNPALLPALLQQLGQENPQLLQQISQHQEQFIQMLNEPLGELGELEGEVGAIGDESPQMNYIQVTPQEKEAIERLKALGFPESLVIQAYFACEKNENLAANFLLSQNFDDD
SIO_010081: RAD23A
subclass of: SO_0000673
so part of: RAD23A
location: join(622482..622604,624718..624879,626134..626294,627929..627984,628819..628946,630586..630661,631658..631788,632742..632897,634798..634911)
location: region:622482-634911:1
so has part: feature:622482-622604:1:exon
so has part: feature:624718-624879:1:exon
so has part: feature:626134-626294:1:exon
so has part: feature:627929-627984:1:exon
so has part: feature:628819-628946:1:exon
so has part: feature:630586-630661:1:exon
so has part: feature:631658-631788:1:exon
so has part: feature:632742-632897:1:exon
so has part: feature:634798-634911:1:exon

XP_032939735.1
type: Protein
SIO_000068: ncbiprotein

position:622482:1
position: 622482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:634911:1
position: 634911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622482-622604:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:624718-624879:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:626134-626294:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:627929-627984:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:628819-628946:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:630586-630661:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:631658-631788:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:632742-632897:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:634798-634911:1:exon

GADD45GIP1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: GADD45GIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(635231..636355)
location: region:635231-636355:-1
so has part: feature:635231-636355:-1:exon
subclass of: SO_0000010

117009584
type: Gene
SIO_000068: ncbigene

position:635231:-1
position: 635231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636355:-1
position: 636355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:635231-636355:-1:exon

GADD45GIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: GADD45GIP1
product: GADD45G interacting protein 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083845.1
SIO_010081: GADD45GIP1
subclass of: SO_0000673
so part of: GADD45GIP1
location: complement(join(635231..635708,635792..636355))
location: region:635231-636355:-1
so has part: feature:635792-636355:-1:exon
so has part: feature:635231-635708:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:635792-636355:-1:exon

position:635792:-1
position: 635792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:635231-635708:-1:exon

position:635708:-1
position: 635708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GADD45GIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: GADD45GIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: growth arrest and DNA damage-inducible proteins-interacting protein 1
translation: MAAPLRRALLALGPARSRLPVPVPAPARPYRADPLRRRPGPAPTDPDDLRAAARRFGRLGDASGVEVWRLWPSPEQLREAEAEEREWDPPLRDVEAVLDQREREEARRKKEREELVSRSLAAMPARVAAWRREREALRERARADAERRRRLLAEAGLGGLPRSGTPGRASARAQELLDEMERQKRREEKRRRRQEREEAARSALAAAEAAAAARPLPGAAPEGEEKPPNPTEKT
SIO_010081: GADD45GIP1
subclass of: SO_0000673
so part of: GADD45GIP1
location: complement(join(635339..635708,635792..636126))
location: region:635339-636126:-1
so has part: feature:635792-636126:-1:exon
so has part: feature:635339-635708:-1:exon

XP_032939736.1
type: Protein
SIO_000068: ncbiprotein

position:635339:-1
position: 635339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636126:-1
position: 636126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:635792-636126:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:635339-635708:-1:exon

NFIX
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: NFIX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 639254..657532
location: region:639254-657532:1
so has part: feature:639254-657532:1:exon
subclass of: SO_0000010

117009578
type: Gene
SIO_000068: ncbigene

position:639254:1
position: 639254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:657532:1
position: 657532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:639254-657532:1:exon

NFIX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NFIX
product: nuclear factor I X, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083832.2
SIO_010081: NFIX
subclass of: SO_0000673
so part of: NFIX
location: join(639254..639610,646296..646827,649398..649460,650414..650488,650971..651091,651315..651448,651712..651834,652038..652204,655647..655735,657448..657532)
location: region:639254-657532:1
so has part: feature:639254-639610:1:exon
so has part: feature:646296-646827:1:exon
so has part: feature:649398-649460:1:exon
so has part: feature:650414-650488:1:exon
so has part: feature:650971-651091:1:exon
so has part: feature:651315-651448:1:exon
so has part: feature:651712-651834:1:exon
so has part: feature:652038-652204:1:exon
so has part: feature:655647-655735:1:exon
so has part: feature:657448-657532:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:639254-639610:1:exon

position:639610:1
position: 639610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:646296-646827:1:exon

position:646296:1
position: 646296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646827:1
position: 646827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:649398-649460:1:exon

position:649398:1
position: 649398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:649460:1
position: 649460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:650414-650488:1:exon

position:650414:1
position: 650414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650488:1
position: 650488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:650971-651091:1:exon

position:650971:1
position: 650971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651091:1
position: 651091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:651315-651448:1:exon

position:651315:1
position: 651315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651448:1
position: 651448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:651712-651834:1:exon

position:651712:1
position: 651712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651834:1
position: 651834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:652038-652204:1:exon

position:652038:1
position: 652038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:652204:1
position: 652204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:655647-655735:1:exon

position:655647:1
position: 655647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:655735:1
position: 655735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:657448-657532:1:exon

position:657448:1
position: 657448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NFIX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NFIX
product: nuclear factor I X, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083834.1
SIO_010081: NFIX
subclass of: SO_0000673
so part of: NFIX
location: join(639254..639610,646296..646827,649398..649460,650414..650488,650971..651091,651315..651448,651712..651834,652145..652204,655647..655735,657448..657532)
location: region:639254-657532:1
so has part: feature:639254-639610:1:exon
so has part: feature:646296-646827:1:exon
so has part: feature:649398-649460:1:exon
so has part: feature:650414-650488:1:exon
so has part: feature:650971-651091:1:exon
so has part: feature:651315-651448:1:exon
so has part: feature:651712-651834:1:exon
so has part: feature:652145-652204:1:exon
so has part: feature:655647-655735:1:exon
so has part: feature:657448-657532:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:639254-639610:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:646296-646827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:649398-649460:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:650414-650488:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:650971-651091:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:651315-651448:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:651712-651834:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:652145-652204:1:exon

position:652145:1
position: 652145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:655647-655735:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:657448-657532:1:exon

NFIX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NFIX
product: nuclear factor I X, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083836.1
SIO_010081: NFIX
subclass of: SO_0000673
so part of: NFIX
location: join(639254..639610,646296..646827,649398..649460,650414..650488,650971..651091,651315..651448,651712..651834,655647..655735,657448..657532)
location: region:639254-657532:1
so has part: feature:639254-639610:1:exon
so has part: feature:646296-646827:1:exon
so has part: feature:649398-649460:1:exon
so has part: feature:650414-650488:1:exon
so has part: feature:650971-651091:1:exon
so has part: feature:651315-651448:1:exon
so has part: feature:651712-651834:1:exon
so has part: feature:655647-655735:1:exon
so has part: feature:657448-657532:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:639254-639610:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:646296-646827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:649398-649460:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:650414-650488:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:650971-651091:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:651315-651448:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:651712-651834:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:655647-655735:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:657448-657532:1:exon

NFIX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NFIX
product: nuclear factor I X, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083835.2
SIO_010081: NFIX
subclass of: SO_0000673
so part of: NFIX
location: join(639254..639610,646296..646827,649398..649460,650414..650488,650971..651091,651315..651448,652038..652204,655647..655735,657448..657532)
location: region:639254-657532:1
so has part: feature:639254-639610:1:exon
so has part: feature:646296-646827:1:exon
so has part: feature:649398-649460:1:exon
so has part: feature:650414-650488:1:exon
so has part: feature:650971-651091:1:exon
so has part: feature:651315-651448:1:exon
so has part: feature:652038-652204:1:exon
so has part: feature:655647-655735:1:exon
so has part: feature:657448-657532:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:639254-639610:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:646296-646827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:649398-649460:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:650414-650488:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:650971-651091:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:651315-651448:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:652038-652204:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:655647-655735:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:657448-657532:1:exon

NFIX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: NFIX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor 1 X-type isoform X2
translation: MGVAYRTMGVPPKKWAVPTPHWASPHPRGRVPEWAWPPWGGRGLPGWAWPARASRGKSAAGANFGQNFPRAPPAPGPPGPPGTPRSPPPCPAAADTAAMYSPYCLTQDEFHPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKEEERAVKDELLGEKPEVKQKWASRLLAKLRKDIRPECREDFVLSVTGKKAPCCVLSNPDQKGKIRRIDCLRQADKVWRLDLVMVILFKGVPLESTDGERLAKAPQCASPGLCVQPHHIGVTIKELDLYLAYFVHAPDSGQSDSSNPQGDADIKPLPNGHLTFQDCFVTSGVWNVTELVRVSQTPVATASGPNFSLADLESPGGYYNISPVALGRRPLGPPTASGPKRPKALDEGDLEGPGDDVFYPGPGRSPAPGSSQGPWGGDVDTGPAALKKSGKLDFCSALSGHGAAPRMAFGHHPLPVLAGVRPGLAQGLRAVRLRRRRRPGPPAFAASGAAAAPRLVGLGPRDGNFLTLPQQQSWFL
SIO_010081: NFIX
subclass of: SO_0000673
so part of: NFIX
location: join(639290..639610,646296..646827,649398..649460,650414..650488,650971..651091,651315..651448,651712..651834,652145..652204,655647..655735,657448..657462)
location: region:639290-657462:1
so has part: feature:639290-639610:1:exon
so has part: feature:646296-646827:1:exon
so has part: feature:649398-649460:1:exon
so has part: feature:650414-650488:1:exon
so has part: feature:650971-651091:1:exon
so has part: feature:651315-651448:1:exon
so has part: feature:651712-651834:1:exon
so has part: feature:652145-652204:1:exon
so has part: feature:655647-655735:1:exon
so has part: feature:657448-657462:1:exon

XP_032939725.1
type: Protein
SIO_000068: ncbiprotein

position:639290:1
position: 639290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:657462:1
position: 657462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:639290-639610:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:646296-646827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:649398-649460:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:650414-650488:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:650971-651091:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:651315-651448:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:651712-651834:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:652145-652204:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:655647-655735:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:657448-657462:1:exon

NFIX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: NFIX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor 1 X-type isoform X4
translation: MGVAYRTMGVPPKKWAVPTPHWASPHPRGRVPEWAWPPWGGRGLPGWAWPARASRGKSAAGANFGQNFPRAPPAPGPPGPPGTPRSPPPCPAAADTAAMYSPYCLTQDEFHPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKEEERAVKDELLGEKPEVKQKWASRLLAKLRKDIRPECREDFVLSVTGKKAPCCVLSNPDQKGKIRRIDCLRQADKVWRLDLVMVILFKGVPLESTDGERLAKAPQCASPGLCVQPHHIGVTIKELDLYLAYFVHAPDSGQSDSSNPQGDADIKPLPNGHLTFQDCFVTSGVWNVTELVRVSQTPVATASGPNFSLADLESPGGYYNISPVALGRRPLGPPTASGPKRPKALDEGDLEGPGDDVFYPGPGRSPAPGSSQGPWGGDVDTGPAALKKSGKLDFCSALSGHGAAPRMAFGHHPLPVLAGVRPAFAASGAAAAPRLVGLGPRDGNFLTLPQQQSWFL
SIO_010081: NFIX
subclass of: SO_0000673
so part of: NFIX
location: join(639290..639610,646296..646827,649398..649460,650414..650488,650971..651091,651315..651448,651712..651834,655647..655735,657448..657462)
location: region:639290-657462:1
so has part: feature:639290-639610:1:exon
so has part: feature:646296-646827:1:exon
so has part: feature:649398-649460:1:exon
so has part: feature:650414-650488:1:exon
so has part: feature:650971-651091:1:exon
so has part: feature:651315-651448:1:exon
so has part: feature:651712-651834:1:exon
so has part: feature:655647-655735:1:exon
so has part: feature:657448-657462:1:exon

XP_032939727.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:639290-639610:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:646296-646827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:649398-649460:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:650414-650488:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:650971-651091:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:651315-651448:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:651712-651834:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:655647-655735:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:657448-657462:1:exon

NFIX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: NFIX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor 1 X-type isoform X1
translation: MGVAYRTMGVPPKKWAVPTPHWASPHPRGRVPEWAWPPWGGRGLPGWAWPARASRGKSAAGANFGQNFPRAPPAPGPPGPPGTPRSPPPCPAAADTAAMYSPYCLTQDEFHPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKEEERAVKDELLGEKPEVKQKWASRLLAKLRKDIRPECREDFVLSVTGKKAPCCVLSNPDQKGKIRRIDCLRQADKVWRLDLVMVILFKGVPLESTDGERLAKAPQCASPGLCVQPHHIGVTIKELDLYLAYFVHAPDSGQSDSSNPQGDADIKPLPNGHLTFQDCFVTSGVWNVTELVRVSQTPVATASGPNFSLADLESPGGYYNISPVALGRRPLGPPTASGPKRPKALDEGDLEGPGDDVFYPGPGRSPAPGSSQGPWGGDVDTGPAALKKSGKLDFCSALSGHGAAPRMAFGHHPLPVLAGVRPGSPRATASALHFPSGSLLPQSSPYFAHPTIRYHHGQDSLKDFVQFVCADGAAQGPQHSQRQAPPLPPALSASDPATATF
SIO_010081: NFIX
subclass of: SO_0000673
so part of: NFIX
location: join(639290..639610,646296..646827,649398..649460,650414..650488,650971..651091,651315..651448,651712..651834,652038..652204,655647..655718)
location: region:639290-655718:1
so has part: feature:639290-639610:1:exon
so has part: feature:646296-646827:1:exon
so has part: feature:649398-649460:1:exon
so has part: feature:650414-650488:1:exon
so has part: feature:650971-651091:1:exon
so has part: feature:651315-651448:1:exon
so has part: feature:651712-651834:1:exon
so has part: feature:652038-652204:1:exon
so has part: feature:655647-655718:1:exon

XP_032939723.1
type: Protein
SIO_000068: ncbiprotein

position:655718:1
position: 655718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:639290-639610:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:646296-646827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:649398-649460:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:650414-650488:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:650971-651091:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:651315-651448:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:651712-651834:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:652038-652204:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:655647-655718:1:exon

NFIX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: NFIX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor 1 X-type isoform X3
translation: MGVAYRTMGVPPKKWAVPTPHWASPHPRGRVPEWAWPPWGGRGLPGWAWPARASRGKSAAGANFGQNFPRAPPAPGPPGPPGTPRSPPPCPAAADTAAMYSPYCLTQDEFHPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKEEERAVKDELLGEKPEVKQKWASRLLAKLRKDIRPECREDFVLSVTGKKAPCCVLSNPDQKGKIRRIDCLRQADKVWRLDLVMVILFKGVPLESTDGERLAKAPQCASPGLCVQPHHIGVTIKELDLYLAYFVHAPDSGQSDSSNPQGDADIKPLPNGHLTFQDCFVTSGVWNVTELVRVSQTPVATASGPNFSLADLESPGGYYNISPVALGRRPLGPPTASGPKRPKALDEGDLEGPGDDVFYPGPGRSPAPGSSQGPWGGDVDTGSPRATASALHFPSGSLLPQSSPYFAHPTIRYHHGQDSLKDFVQFVCADGAAQGPQHSQRQAPPLPPALSASDPATATF
SIO_010081: NFIX
subclass of: SO_0000673
so part of: NFIX
location: join(639290..639610,646296..646827,649398..649460,650414..650488,650971..651091,651315..651448,652038..652204,655647..655718)
location: region:639290-655718:1
so has part: feature:639290-639610:1:exon
so has part: feature:646296-646827:1:exon
so has part: feature:649398-649460:1:exon
so has part: feature:650414-650488:1:exon
so has part: feature:650971-651091:1:exon
so has part: feature:651315-651448:1:exon
so has part: feature:652038-652204:1:exon
so has part: feature:655647-655718:1:exon

XP_032939726.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:639290-639610:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:646296-646827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:649398-649460:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:650414-650488:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:650971-651091:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:651315-651448:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:652038-652204:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:655647-655718:1:exon

NFIX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NFIX
product: nuclear factor I X, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083837.2
SIO_010081: NFIX
subclass of: SO_0000673
so part of: NFIX
location: join(644998..645358,646296..646827,649398..649460,650414..650488,650971..651091,651315..651448,651712..651834,652038..652204,655647..655735,657448..657532)
location: region:644998-657532:1
so has part: feature:644998-645358:1:exon
so has part: feature:646296-646827:1:exon
so has part: feature:649398-649460:1:exon
so has part: feature:650414-650488:1:exon
so has part: feature:650971-651091:1:exon
so has part: feature:651315-651448:1:exon
so has part: feature:651712-651834:1:exon
so has part: feature:652038-652204:1:exon
so has part: feature:655647-655735:1:exon
so has part: feature:657448-657532:1:exon

position:644998:1
position: 644998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:644998-645358:1:exon

position:645358:1
position: 645358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:646296-646827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:649398-649460:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:650414-650488:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:650971-651091:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:651315-651448:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:651712-651834:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:652038-652204:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:655647-655735:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:657448-657532:1:exon

NFIX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NFIX
product: nuclear factor I X, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083838.2
SIO_010081: NFIX
subclass of: SO_0000673
so part of: NFIX
location: join(644998..645184,645328..645358,646296..646827,649398..649460,650414..650488,650971..651091,651315..651448,651712..651834,652038..652204,655647..655735,657448..657532)
location: region:644998-657532:1
so has part: feature:644998-645184:1:exon
so has part: feature:645328-645358:1:exon
so has part: feature:646296-646827:1:exon
so has part: feature:649398-649460:1:exon
so has part: feature:650414-650488:1:exon
so has part: feature:650971-651091:1:exon
so has part: feature:651315-651448:1:exon
so has part: feature:651712-651834:1:exon
so has part: feature:652038-652204:1:exon
so has part: feature:655647-655735:1:exon
so has part: feature:657448-657532:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:644998-645184:1:exon

position:645184:1
position: 645184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:645328-645358:1:exon

position:645328:1
position: 645328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:646296-646827:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:649398-649460:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:650414-650488:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:650971-651091:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:651315-651448:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:651712-651834:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:652038-652204:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:655647-655735:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:657448-657532:1:exon

NFIX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: NFIX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor 1 X-type isoform X5
translation: MDEFHPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKEEERAVKDELLGEKPEVKQKWASRLLAKLRKDIRPECREDFVLSVTGKKAPCCVLSNPDQKGKIRRIDCLRQADKVWRLDLVMVILFKGVPLESTDGERLAKAPQCASPGLCVQPHHIGVTIKELDLYLAYFVHAPDSGQSDSSNPQGDADIKPLPNGHLTFQDCFVTSGVWNVTELVRVSQTPVATASGPNFSLADLESPGGYYNISPVALGRRPLGPPTASGPKRPKALDEGDLEGPGDDVFYPGPGRSPAPGSSQGPWGGDVDTGPAALKKSGKLDFCSALSGHGAAPRMAFGHHPLPVLAGVRPGSPRATASALHFPSGSLLPQSSPYFAHPTIRYHHGQDSLKDFVQFVCADGAAQGPQHSQRQAPPLPPALSASDPATATF
SIO_010081: NFIX
subclass of: SO_0000673
so part of: NFIX
location: join(645356..645358,646296..646827,649398..649460,650414..650488,650971..651091,651315..651448,651712..651834,652038..652204,655647..655718)
location: region:645356-655718:1
so has part: feature:645356-645358:1:exon
so has part: feature:646296-646827:1:exon
so has part: feature:649398-649460:1:exon
so has part: feature:650414-650488:1:exon
so has part: feature:650971-651091:1:exon
so has part: feature:651315-651448:1:exon
so has part: feature:651712-651834:1:exon
so has part: feature:652038-652204:1:exon
so has part: feature:655647-655718:1:exon

XP_032939728.1
type: Protein
SIO_000068: ncbiprotein

position:645356:1
position: 645356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:645356-645358:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:646296-646827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:649398-649460:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:650414-650488:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:650971-651091:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:651315-651448:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:651712-651834:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:652038-652204:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:655647-655718:1:exon

NFIX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: NFIX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor 1 X-type isoform X5
translation: MDEFHPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKEEERAVKDELLGEKPEVKQKWASRLLAKLRKDIRPECREDFVLSVTGKKAPCCVLSNPDQKGKIRRIDCLRQADKVWRLDLVMVILFKGVPLESTDGERLAKAPQCASPGLCVQPHHIGVTIKELDLYLAYFVHAPDSGQSDSSNPQGDADIKPLPNGHLTFQDCFVTSGVWNVTELVRVSQTPVATASGPNFSLADLESPGGYYNISPVALGRRPLGPPTASGPKRPKALDEGDLEGPGDDVFYPGPGRSPAPGSSQGPWGGDVDTGPAALKKSGKLDFCSALSGHGAAPRMAFGHHPLPVLAGVRPGSPRATASALHFPSGSLLPQSSPYFAHPTIRYHHGQDSLKDFVQFVCADGAAQGPQHSQRQAPPLPPALSASDPATATF
SIO_010081: NFIX
subclass of: SO_0000673
so part of: NFIX
location: join(645356..645358,646296..646827,649398..649460,650414..650488,650971..651091,651315..651448,651712..651834,652038..652204,655647..655718)
location: region:645356-655718:1
so has part: feature:645356-645358:1:exon
so has part: feature:646296-646827:1:exon
so has part: feature:649398-649460:1:exon
so has part: feature:650414-650488:1:exon
so has part: feature:650971-651091:1:exon
so has part: feature:651315-651448:1:exon
so has part: feature:651712-651834:1:exon
so has part: feature:652038-652204:1:exon
so has part: feature:655647-655718:1:exon

XP_032939729.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:645356-645358:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:646296-646827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:649398-649460:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:650414-650488:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:650971-651091:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:651315-651448:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:651712-651834:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:652038-652204:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:655647-655718:1:exon

LOC117009586
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009586
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 653175..655020
location: region:653175-655020:1
so has part: feature:653175-655020:1:exon
subclass of: SO_0000011

117009586
type: Gene
SIO_000068: ncbigene

position:653175:1
position: 653175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:655020:1
position: 655020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:653175-655020:1:exon

LOC117009586
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117009586
product: uncharacterized LOC117009586, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004420500.1
SIO_010081: LOC117009586
subclass of: SO_0000673
so part of: LOC117009586
location: join(653175..653402,653465..653569,653624..653738,653984..654305,654356..654394,654507..654692,654952..655020)
location: region:653175-655020:1
so has part: feature:653175-653402:1:exon
so has part: feature:653465-653569:1:exon
so has part: feature:653624-653738:1:exon
so has part: feature:653984-654305:1:exon
so has part: feature:654356-654394:1:exon
so has part: feature:654507-654692:1:exon
so has part: feature:654952-655020:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:653175-653402:1:exon

position:653402:1
position: 653402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:653465-653569:1:exon

position:653465:1
position: 653465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:653569:1
position: 653569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:653624-653738:1:exon

position:653624:1
position: 653624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:653738:1
position: 653738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:653984-654305:1:exon

position:653984:1
position: 653984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654305:1
position: 654305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:654356-654394:1:exon

position:654356:1
position: 654356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654394:1
position: 654394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:654507-654692:1:exon

position:654507:1
position: 654507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654692:1
position: 654692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:654952-655020:1:exon

position:654952:1
position: 654952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117009586
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117009586
product: uncharacterized LOC117009586, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004420501.1
SIO_010081: LOC117009586
subclass of: SO_0000673
so part of: LOC117009586
location: join(653175..653569,653624..653738,653984..654305,654356..654410,654463..654487)
location: region:653175-654487:1
so has part: feature:653175-653569:1:exon
so has part: feature:653624-653738:1:exon
so has part: feature:653984-654305:1:exon
so has part: feature:654356-654410:1:exon
so has part: feature:654463-654487:1:exon

position:654487:1
position: 654487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:653175-653569:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:653624-653738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:653984-654305:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:654356-654410:1:exon

position:654410:1
position: 654410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:654463-654487:1:exon

position:654463:1
position: 654463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ACP5
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: ACP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 663950..672106
location: region:663950-672106:1
so has part: feature:663950-672106:1:exon
subclass of: SO_0000010

117009538
type: Gene
SIO_000068: ncbigene

position:663950:1
position: 663950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672106:1
position: 672106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:663950-672106:1:exon

ACP5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ACP5
product: acid phosphatase 5, tartrate resistant, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033083781.1
SIO_010081: ACP5
subclass of: SO_0000673
so part of: ACP5
location: join(663950..664072,665161..665421,665507..665634,668144..668495,671832..672106)
location: region:663950-672106:1
so has part: feature:663950-664072:1:exon
so has part: feature:665161-665421:1:exon
so has part: feature:665507-665634:1:exon
so has part: feature:668144-668495:1:exon
so has part: feature:671832-672106:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:663950-664072:1:exon

position:664072:1
position: 664072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:665161-665421:1:exon

position:665161:1
position: 665161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:665421:1
position: 665421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:665507-665634:1:exon

position:665507:1
position: 665507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:665634:1
position: 665634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:668144-668495:1:exon

position:668144:1
position: 668144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:668495:1
position: 668495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:671832-672106:1:exon

position:671832:1
position: 671832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ACP5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ACP5
product: acid phosphatase 5, tartrate resistant, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033083782.1
SIO_010081: ACP5
subclass of: SO_0000673
so part of: ACP5
location: join(664115..664145,665161..665421,665507..665634,668144..668495,671832..672106)
location: region:664115-672106:1
so has part: feature:664115-664145:1:exon
so has part: feature:665161-665421:1:exon
so has part: feature:665507-665634:1:exon
so has part: feature:668144-668495:1:exon
so has part: feature:671832-672106:1:exon

position:664115:1
position: 664115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:664115-664145:1:exon

position:664145:1
position: 664145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:665161-665421:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:665507-665634:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:668144-668495:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:671832-672106:1:exon

ACP5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ACP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tartrate-resistant acid phosphatase type 5
translation: MPALLCLTALALVTSVTSGGDPGGALTFLALGDWGGVPDPPFVTPRQVATAATMGQVASERGGDFVLALGDNFYYEGVRDEWDPRFQDTFERVFVSPGLRGVPWYVMAGNHDHAGNVTAQLRYSRHSPRWHFPHPYYTLRLHIPGSNSSARLLVLDTVLLCGHSDDFGLGDIPEGPRDAVAAGAHLAWLRAQLEAAAGDSFVLVAGHYPVWSVAKHGPTPCLLRLLRPLLRRHRVTAYLCGHDHNLQYLEEGGVGYILSGAGNFMEDSRPHERSVPPGSLRFFFGSPASPGGFAHLRLEPGAVTVTFLEATGRVLHRVTLPPRHP
SIO_010081: ACP5
subclass of: SO_0000673
so part of: ACP5
location: join(665161..665421,665507..665634,668144..668495,671832..672068)
location: region:665161-672068:1
so has part: feature:665161-665421:1:exon
so has part: feature:665507-665634:1:exon
so has part: feature:668144-668495:1:exon
so has part: feature:671832-672068:1:exon

XP_032939672.1
type: Protein
SIO_000068: ncbiprotein

position:672068:1
position: 672068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:665161-665421:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:665507-665634:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:668144-668495:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:671832-672068:1:exon

ACP5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ACP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tartrate-resistant acid phosphatase type 5
translation: MPALLCLTALALVTSVTSGGDPGGALTFLALGDWGGVPDPPFVTPRQVATAATMGQVASERGGDFVLALGDNFYYEGVRDEWDPRFQDTFERVFVSPGLRGVPWYVMAGNHDHAGNVTAQLRYSRHSPRWHFPHPYYTLRLHIPGSNSSARLLVLDTVLLCGHSDDFGLGDIPEGPRDAVAAGAHLAWLRAQLEAAAGDSFVLVAGHYPVWSVAKHGPTPCLLRLLRPLLRRHRVTAYLCGHDHNLQYLEEGGVGYILSGAGNFMEDSRPHERSVPPGSLRFFFGSPASPGGFAHLRLEPGAVTVTFLEATGRVLHRVTLPPRHP
SIO_010081: ACP5
subclass of: SO_0000673
so part of: ACP5
location: join(665161..665421,665507..665634,668144..668495,671832..672068)
location: region:665161-672068:1
so has part: feature:665161-665421:1:exon
so has part: feature:665507-665634:1:exon
so has part: feature:668144-668495:1:exon
so has part: feature:671832-672068:1:exon

XP_032939673.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:665161-665421:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:665507-665634:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:668144-668495:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:671832-672068:1:exon

ELOF1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: ELOF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 673290..674386
location: region:673290-674386:1
so has part: feature:673290-674386:1:exon
subclass of: SO_0000010

117009535
type: Gene
SIO_000068: ncbigene

position:673290:1
position: 673290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:674386:1
position: 674386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:673290-674386:1:exon

ELOF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ELOF1
product: elongation factor 1 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033083775.2
SIO_010081: ELOF1
subclass of: SO_0000673
so part of: ELOF1
location: join(673290..673605,673875..673945,674035..674386)
location: region:673290-674386:1
so has part: feature:673290-673605:1:exon
so has part: feature:673875-673945:1:exon
so has part: feature:674035-674386:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:673290-673605:1:exon

position:673605:1
position: 673605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:673875-673945:1:exon

position:673875:1
position: 673875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:673945:1
position: 673945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:674035-674386:1:exon

position:674035:1
position: 674035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ELOF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ELOF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation factor 1 homolog
translation: MGRRKSKRKPPPKKKMTGTLETQFTCPFCNHEKSCDVKMDRARNTGVISCTVCLEEFQTPITYLSEPVDVYSDWIDACEAANQ
SIO_010081: ELOF1
subclass of: SO_0000673
so part of: ELOF1
location: join(673490..673605,673875..673945,674035..674099)
location: region:673490-674099:1
so has part: feature:673490-673605:1:exon
so has part: feature:673875-673945:1:exon
so has part: feature:674035-674099:1:exon