Catharus ustulatus isolate bCatUst1 chromosome 32, bCatUst1.pri.v2, whole genome shotgun sequence.
type: Entry
definition: Catharus ustulatus isolate bCatUst1 chromosome 32, bCatUst1.pri.v2, whole genome shotgun sequence.
sequence version: NC_046252.1
sequence date: 2021-07-28
sequence: sequence
division: CON
label: NC_046252.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA613294
dblink: SAMN12618602
keyword: WGS
keyword: RefSeq
source: Catharus ustulatus (Swainson's thrush)
organism: Catharus ustulatus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Turdidae; Catharus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020367.1.\nAssembly name: bCatUst1.pri.v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/12/22. The original whole-genome shotgun project has the\naccession WNMQ00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 06-AUG-2020\nAssembly Method :: FALCON v. DX 1.9.0; FALCON-Unzip v.\n 6.0.0.47841; purge_dups github v.\n purge_haplotig (bitbucket v1.0.3+\n 1.Nov.2018); Scaff10x v. 2; Bionano Solve\n v. 3.2.1_04122018; Salsa2 HiC v. 2.2;\n Arrow polishing and gap filling v.\n Smrtlink_6.0.0.47841; Longranger Align v.\n 2.2.2; freebayes v. 1.3.1; gEVAL manual\n curation v. 2020-08-06; VGP assembly\n pipeline v. 1.5\nAssembly Name :: bCatUst1.pri.v2\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 60.58x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Catharus ustulatus Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 2810279
topology: linear
so has quality: SO_0000987
location: 1..2810279
location: region:1-2810279:1
RO_0002162: 91951

NC_046252
type: RefSeq
SIO_000068: refseq

PRJNA613294
type: BioProject
SIO_000068: bioproject

SAMN12618602
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2810279:1
position: 2810279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-2810279:1:source
so part of: sequence
organism: Catharus ustulatus
mol type: genomic DNA
isolate: bCatUst1
chromosome: 32
sex: female
tissue type: blood
dev stage: adult
country: Canada: Kamloops
lat lon: 50.67613 N 120.33787 W
collection date: 15-Jul-2018
collected by: Kira Delmore

91951
type: Taxonomy
SIO_000068: taxonomy

FAM3A
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: FAM3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(325..9111)
location: region:325-9111:-1
so has part: feature:325-9111:-1:exon
subclass of: SO_0000010

117009285
type: Gene
SIO_000068: ncbigene

position:325:-1
position: 325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9111:-1
position: 9111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325-9111:-1:exon

FAM3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: FAM3A
product: FAM3 metabolism regulating signaling molecule A
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083519.1
SIO_010081: FAM3A
subclass of: SO_0000673
so part of: FAM3A
location: complement(join(325..930,993..1099,2460..2586,3587..3671,4491..4541,4807..4865,5402..5525,6256..6279,6967..7077,9041..9111))
location: region:325-9111:-1
so has part: feature:9041-9111:-1:exon
so has part: feature:6967-7077:-1:exon
so has part: feature:6256-6279:-1:exon
so has part: feature:5402-5525:-1:exon
so has part: feature:4807-4865:-1:exon
so has part: feature:4491-4541:-1:exon
so has part: feature:3587-3671:-1:exon
so has part: feature:2460-2586:-1:exon
so has part: feature:993-1099:-1:exon
so has part: feature:325-930:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9041-9111:-1:exon

position:9041:-1
position: 9041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6967-7077:-1:exon

position:6967:-1
position: 6967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7077:-1
position: 7077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6256-6279:-1:exon

position:6256:-1
position: 6256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6279:-1
position: 6279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5402-5525:-1:exon

position:5402:-1
position: 5402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5525:-1
position: 5525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4807-4865:-1:exon

position:4807:-1
position: 4807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4865:-1
position: 4865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4491-4541:-1:exon

position:4491:-1
position: 4491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4541:-1
position: 4541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3587-3671:-1:exon

position:3587:-1
position: 3587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3671:-1
position: 3671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2460-2586:-1:exon

position:2460:-1
position: 2460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2586:-1
position: 2586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:993-1099:-1:exon

position:993:-1
position: 993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1099:-1
position: 1099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:325-930:-1:exon

position:930:-1
position: 930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FAM3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: FAM3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM3A
translation: MRVAAPLRLLALGGAAALAWLAVTSLLGPPRAPPPLLRLLRREENPPTAAPRPPRFKCGLPRPCPPRHFAFRVLSGAANVVGPRICLEGRELMSSVKNNVGRGLNIALVNGVSGELIAAQAFDMWAGDVEELLRFLRPLHEGTLVLVASYDDPATKLTEESRRIFGELGSAVAKDLGFRDSWVFVGAKGVQDRSPFEQHVRNSRSSNKYEGWPEALELGGCVPQRPPG
SIO_010081: FAM3A
subclass of: SO_0000673
so part of: FAM3A
location: complement(join(1007..1099,2460..2586,3587..3671,4491..4541,4807..4865,5402..5525,6256..6279,6967..7077,9041..9053))
location: region:1007-9053:-1
so has part: feature:9041-9053:-1:exon
so has part: feature:6967-7077:-1:exon
so has part: feature:6256-6279:-1:exon
so has part: feature:5402-5525:-1:exon
so has part: feature:4807-4865:-1:exon
so has part: feature:4491-4541:-1:exon
so has part: feature:3587-3671:-1:exon
so has part: feature:2460-2586:-1:exon
so has part: feature:1007-1099:-1:exon

XP_032939410.1
type: Protein
SIO_000068: ncbiprotein

position:1007:-1
position: 1007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9053:-1
position: 9053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9041-9053:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6967-7077:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6256-6279:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5402-5525:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4807-4865:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4491-4541:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3587-3671:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2460-2586:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1007-1099:-1:exon

UBL4A
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: UBL4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9450..13861)
location: region:9450-13861:-1
so has part: feature:9450-13861:-1:exon
subclass of: SO_0000010

117009308
type: Gene
SIO_000068: ncbigene

position:9450:-1
position: 9450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13861:-1
position: 13861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9450-13861:-1:exon

UBL4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: UBL4A
product: ubiquitin like 4A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033083541.1
SIO_010081: UBL4A
subclass of: SO_0000673
so part of: UBL4A
location: complement(join(9450..9646,10456..10564,11409..11650,13569..13674,13754..13861))
location: region:9450-13861:-1
so has part: feature:13754-13861:-1:exon
so has part: feature:13569-13674:-1:exon
so has part: feature:11409-11650:-1:exon
so has part: feature:10456-10564:-1:exon
so has part: feature:9450-9646:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13754-13861:-1:exon

position:13754:-1
position: 13754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13569-13674:-1:exon

position:13569:-1
position: 13569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13674:-1
position: 13674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11409-11650:-1:exon

position:11409:-1
position: 11409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11650:-1
position: 11650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10456-10564:-1:exon

position:10456:-1
position: 10456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10564:-1
position: 10564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9450-9646:-1:exon

position:9646:-1
position: 9646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UBL4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: UBL4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-like protein 4A
translation: MLLTVKALQGRECSLQVSPEERVGALKALVAERLQVPVEQQRLLYRGKALADERRLSDYSIGPSARLNLVLKPPAGGGGARAGGGGGAATPPEDLGEPPPPPPAVFGPGLAQILGRHFGSQEGPRVLQQLLKDYDRSLRGLSLDDLERLGARLLQEGGGGAGGAPPEPRGHWAVTGSTGRSLGSLGAAGGRCEVIGSTGRSLVCHWDHWEPLGGAVPRRRGRRELQSRQHFRL
SIO_010081: UBL4A
subclass of: SO_0000673
so part of: UBL4A
location: complement(join(9450..9646,10456..10564,11409..11650,13569..13674,13754..13801))
location: region:9450-13801:-1
so has part: feature:13754-13801:-1:exon
so has part: feature:13569-13674:-1:exon
so has part: feature:11409-11650:-1:exon
so has part: feature:10456-10564:-1:exon
so has part: feature:9450-9646:-1:exon

XP_032939432.1
type: Protein
SIO_000068: ncbiprotein

position:13801:-1
position: 13801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13754-13801:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13569-13674:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11409-11650:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10456-10564:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9450-9646:-1:exon

LOC117009210
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(21602..32796)
location: region:21602-32796:-1
so has part: feature:21602-32796:-1:exon
subclass of: SO_0000010

117009210
type: Gene
SIO_000068: ncbigene

position:21602:-1
position: 21602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32796:-1
position: 32796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21602-32796:-1:exon

LOC117009210
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009210
product: 5-aminolevulinate synthase, erythroid-specific, mitochondrial-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 95% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033083451.1
SIO_010081: LOC117009210
subclass of: SO_0000673
so part of: LOC117009210
location: complement(join(21602..21876,23696..23773,24657..24767,28104..28208,32715..32796))
location: region:21602-32796:-1
so has part: feature:32715-32796:-1:exon
so has part: feature:28104-28208:-1:exon
so has part: feature:24657-24767:-1:exon
so has part: feature:23696-23773:-1:exon
so has part: feature:21602-21876:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32715-32796:-1:exon

position:32715:-1
position: 32715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:28104-28208:-1:exon

position:28104:-1
position: 28104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28208:-1
position: 28208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:24657-24767:-1:exon

position:24657:-1
position: 24657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24767:-1
position: 24767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:23696-23773:-1:exon

position:23696:-1
position: 23696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23773:-1
position: 23773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:21602-21876:-1:exon

position:21876:-1
position: 21876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-aminolevulinate synthase, erythroid-specific, mitochondrial-like
translation: MAALLRCPVLARNPRLLRALSTASAEPREPRPQIGARSGSPCPFMALQGGEGPPFVRAPPELQEDVTPPEEDPLQSLLDFGDPSEDPPERRPEENLPADAFPYQSLFGARLAGLRRSHTYREFTELGRSAQHPPSAILGSPPSAVLGSPPSEVSGSPPRLVQVWCSNDYLGMSRHPEVLRAARWAPQK
SIO_010081: LOC117009210
subclass of: SO_0000673
so part of: LOC117009210
location: complement(join(21602..21876,23696..23773,24657..24767,28104..28206))
location: region:21602-28206:-1
so has part: feature:28104-28206:-1:exon
so has part: feature:24657-24767:-1:exon
so has part: feature:23696-23773:-1:exon
so has part: feature:21602-21876:-1:exon

XP_032939342.1
type: Protein
SIO_000068: ncbiprotein

position:28206:-1
position: 28206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28104-28206:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:24657-24767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:23696-23773:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21602-21876:-1:exon

PRICKLE3
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: PRICKLE3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 34039..46894
location: region:34039-46894:1
so has part: feature:34039-46894:1:exon
subclass of: SO_0000010

117009211
type: Gene
SIO_000068: ncbigene

position:34039:1
position: 34039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46894:1
position: 46894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34039-46894:1:exon

PRICKLE3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PRICKLE3
product: prickle planar cell polarity protein 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 5 bases in 5 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033083452.1
SIO_010081: PRICKLE3
subclass of: SO_0000673
so part of: PRICKLE3
location: join(34039..34119,35137..35213,35999..36182,37830..37932,39406..39536,41066..41277,43746..43932,45434..45639,46548..46622,46800..46894)
location: region:34039-46894:1
so has part: feature:34039-34119:1:exon
so has part: feature:35137-35213:1:exon
so has part: feature:35999-36182:1:exon
so has part: feature:37830-37932:1:exon
so has part: feature:39406-39536:1:exon
so has part: feature:41066-41277:1:exon
so has part: feature:43746-43932:1:exon
so has part: feature:45434-45639:1:exon
so has part: feature:46548-46622:1:exon
so has part: feature:46800-46894:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:34039-34119:1:exon

position:34119:1
position: 34119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:35137-35213:1:exon

position:35137:1
position: 35137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35213:1
position: 35213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:35999-36182:1:exon

position:35999:1
position: 35999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36182:1
position: 36182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:37830-37932:1:exon

position:37830:1
position: 37830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37932:1
position: 37932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:39406-39536:1:exon

position:39406:1
position: 39406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39536:1
position: 39536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:41066-41277:1:exon

position:41066:1
position: 41066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41277:1
position: 41277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:43746-43932:1:exon

position:43746:1
position: 43746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43932:1
position: 43932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:45434-45639:1:exon

position:45434:1
position: 45434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45639:1
position: 45639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:46548-46622:1:exon

position:46548:1
position: 46548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46622:1
position: 46622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:46800-46894:1:exon

position:46800:1
position: 46800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRICKLE3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PRICKLE3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 5 bases in 5 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: prickle planar cell polarity protein 3
translation: MGVVSMRGRGQSRHVHPGSRRRRSQRDAEDPERGCPCRACRELCPGFQEHPWRKICQHASVPWGARGGGVPPRLQRLLARLLPELQPXPSSEGPGGSAQEFAWXPPGLSPEQVPQLFPVPPPAQVPRLRSPGERHRLRELLRQLPHDLEPQFCHDLDEQERXELQLFARRRKRENLGQGSVRALGGAGAVCQQCGGPIPGGSLAVFAARAGLGLCWHPQCFQCHQCHQPLVDLLYFCPGGRGGXLLCGRHHGDSVRHRCPGCDELIFGGGWAEAGGRRWHLRHLRCLECEGPLEPQNLPRAGAGTPLCPPCRALRAHLCDTCGDPIEALSPHVTHRGQHWHPLPGCFRCAPCGRPLLGLPFLPRGGEIFCSPQCAPGPPXPPQGPQRRSWGGGNTVSQPPSRHRRRSLPELGLSARPSPPAPPPRGPPGASPSARAPAPLPGLPPGLTSDL
SIO_010081: PRICKLE3
subclass of: SO_0000673
so part of: PRICKLE3
location: join(34039..34119,35137..35213,35999..36182,37830..37932,39406..39536,41066..41277,43746..43932,45434..45639,46548..46622,46800..46894)
location: region:34039-46894:1
so has part: feature:34039-34119:1:exon
so has part: feature:35137-35213:1:exon
so has part: feature:35999-36182:1:exon
so has part: feature:37830-37932:1:exon
so has part: feature:39406-39536:1:exon
so has part: feature:41066-41277:1:exon
so has part: feature:43746-43932:1:exon
so has part: feature:45434-45639:1:exon
so has part: feature:46548-46622:1:exon
so has part: feature:46800-46894:1:exon

XP_032939343.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34039-34119:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:35137-35213:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:35999-36182:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:37830-37932:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:39406-39536:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:41066-41277:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43746-43932:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:45434-45639:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:46548-46622:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:46800-46894:1:exon

PQBP1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: PQBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 47829..53063
location: region:47829-53063:1
so has part: feature:47829-53063:1:exon
subclass of: SO_0000010

117009286
type: Gene
SIO_000068: ncbigene

position:47829:1
position: 47829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53063:1
position: 53063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47829-53063:1:exon

PQBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PQBP1
product: polyglutamine binding protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033083520.1
SIO_010081: PQBP1
subclass of: SO_0000673
so part of: PQBP1
location: join(47829..47914,49759..49832,50436..50547,51646..51755,51838..51927,52029..52086,52876..53063)
location: region:47829-53063:1
so has part: feature:47829-47914:1:exon
so has part: feature:49759-49832:1:exon
so has part: feature:50436-50547:1:exon
so has part: feature:51646-51755:1:exon
so has part: feature:51838-51927:1:exon
so has part: feature:52029-52086:1:exon
so has part: feature:52876-53063:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47829-47914:1:exon

position:47914:1
position: 47914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:49759-49832:1:exon

position:49759:1
position: 49759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49832:1
position: 49832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:50436-50547:1:exon

position:50436:1
position: 50436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50547:1
position: 50547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:51646-51755:1:exon

position:51646:1
position: 51646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51755:1
position: 51755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:51838-51927:1:exon

position:51838:1
position: 51838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51927:1
position: 51927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:52029-52086:1:exon

position:52029:1
position: 52029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52086:1
position: 52086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:52876-53063:1:exon

position:52876:1
position: 52876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PQBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PQBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyglutamine-binding protein 1
translation: MPLPVALQSRLAKRGLLKHVEPEPEEEIIAEDYDDAHVDYEASRLEGLMPPWYKVIDPTCGLPYYWNVETDLVSWLSPNDPNSVITKPAKRLKGNPEPEEPPEKEEPRERRFHRREELAPYPKGKKGRKDEELDPMDPSAYSDAPRGSWSTGLPKRNEAKTGADTTAAGPLFQQRPYPSPGAVLRANAEASRGKD
SIO_010081: PQBP1
subclass of: SO_0000673
so part of: PQBP1
location: join(49766..49832,50436..50547,51646..51755,51838..51927,52029..52086,52876..53026)
location: region:49766-53026:1
so has part: feature:49766-49832:1:exon
so has part: feature:50436-50547:1:exon
so has part: feature:51646-51755:1:exon
so has part: feature:51838-51927:1:exon
so has part: feature:52029-52086:1:exon
so has part: feature:52876-53026:1:exon

XP_032939411.1
type: Protein
SIO_000068: ncbiprotein

position:49766:1
position: 49766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53026:1
position: 53026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49766-49832:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:50436-50547:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:51646-51755:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:51838-51927:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:52029-52086:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:52876-53026:1:exon

LOC117009212
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009212
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(53137..56216)
location: region:53137-56216:-1
so has part: feature:53137-56216:-1:exon
subclass of: SO_0000010

117009212
type: Gene
SIO_000068: ncbigene

position:53137:-1
position: 53137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56216:-1
position: 56216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53137-56216:-1:exon

LOC117009212
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009212
product: uncharacterized LOC117009212
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033083453.1
SIO_010081: LOC117009212
subclass of: SO_0000673
so part of: LOC117009212
location: complement(join(53137..53152,54621..54862,55001..55278,55338..56216))
location: region:53137-56216:-1
so has part: feature:55338-56216:-1:exon
so has part: feature:55001-55278:-1:exon
so has part: feature:54621-54862:-1:exon
so has part: feature:53137-53152:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55338-56216:-1:exon

position:55338:-1
position: 55338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:55001-55278:-1:exon

position:55001:-1
position: 55001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55278:-1
position: 55278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:54621-54862:-1:exon

position:54621:-1
position: 54621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54862:-1
position: 54862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:53137-53152:-1:exon

position:53152:-1
position: 53152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009212
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009212
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117009212
translation: MVCKDSHGCAKTSPGCAKTCTGVQGLSGGSKIPHGCARIPVGVQGLSWVCKNNHGVPEAPWVCKPLLSVQKPPWVCRDSQEGPETPVGVQEISWMFKIPPWVCKDPCGCARTFMGVQGLSGVSKICCGCARSLCGCVRNLLGVQKPSQGCQSLHGGPKPLLGVQGSLWLCKKSPGCPKPLLSVQKPPWVCKDSEECPETPMGVQGSLWVCRTLRSAQNPPWVCKDPCGCARTITGVPEPPWVSQTTPGCARTSMVVQGLSGGSKIPPGCAGTLGGCVRTLRSVPNSSWVCKNHHGRARTLRRVQRPRGCAGTLGGCARNLMGVQNPTMGVQEHWGFGVS
SIO_010081: LOC117009212
subclass of: SO_0000673
so part of: LOC117009212
location: complement(join(53137..53152,54621..54862,55001..55278,55338..55821))
location: region:53137-55821:-1
so has part: feature:55338-55821:-1:exon
so has part: feature:55001-55278:-1:exon
so has part: feature:54621-54862:-1:exon
so has part: feature:53137-53152:-1:exon

XP_032939344.1
type: Protein
SIO_000068: ncbiprotein

position:55821:-1
position: 55821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55338-55821:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:55001-55278:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:54621-54862:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:53137-53152:-1:exon

FTSJ1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: FTSJ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<56622..62779)
location: region:56622-62779:-1
so has part: feature:56622-62779:-1:exon
subclass of: SO_0000010

117009388
type: Gene
SIO_000068: ncbigene

position:56622:-1
position: 56622
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:62779:-1
position: 62779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56622-62779:-1:exon

FTSJ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: FTSJ1
product: FtsJ RNA 2'-O-methyltransferase 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033083630.1
SIO_010081: FTSJ1
subclass of: SO_0000673
so part of: FTSJ1
location: complement(join(<56622..56726,57017..57120,58778..58860,58962..59063,59170..59227,59364..59416,59514..59592,60853..60949,61879..61948,62660..62779))
location: region:56622-62779:-1
so has part: feature:62660-62779:-1:exon
so has part: feature:61879-61948:-1:exon
so has part: feature:60853-60949:-1:exon
so has part: feature:59514-59592:-1:exon
so has part: feature:59364-59416:-1:exon
so has part: feature:59170-59227:-1:exon
so has part: feature:58962-59063:-1:exon
so has part: feature:58778-58860:-1:exon
so has part: feature:57017-57120:-1:exon
so has part: feature:56622-56726:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62660-62779:-1:exon

position:62660:-1
position: 62660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:61879-61948:-1:exon

position:61879:-1
position: 61879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61948:-1
position: 61948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:60853-60949:-1:exon

position:60853:-1
position: 60853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60949:-1
position: 60949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:59514-59592:-1:exon

position:59514:-1
position: 59514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59592:-1
position: 59592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:59364-59416:-1:exon

position:59364:-1
position: 59364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59416:-1
position: 59416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:59170-59227:-1:exon

position:59170:-1
position: 59170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59227:-1
position: 59227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:58962-59063:-1:exon

position:58962:-1
position: 58962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59063:-1
position: 59063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:58778-58860:-1:exon

position:58778:-1
position: 58778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58860:-1
position: 58860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:57017-57120:-1:exon

position:57017:-1
position: 57017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57120:-1
position: 57120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:56622-56726:-1:exon

position:56726:-1
position: 56726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FTSJ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: FTSJ1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase
translation: MGRSSKDKRDIYYRLAKXGGWRARSAFKLLQLEQRFQLFQGVRRAVDLCAAPGSWSQVLSRHLRAPPGPPAPIVAVDLQAMAPLPGVLQIQGDITKASTAQQIQRHFEGHPADLVVCDGAPDVTGLHDLDEYIQAQLLLAALNITTHVLRKGGTFVAKVNFQSKDVTLLYSQLRLFFPDVTCAKPRSSRNSSIEAFVVCRGYXPPEGFVPCAENALLEPGAGLALSPLPGPSRAIAPFVACGDLSGFDPDRTYPLQLDPAQPYSYVPPPAPPIAPPYARACSLRRGRGRGG
SIO_010081: FTSJ1
subclass of: SO_0000673
so part of: FTSJ1
location: complement(join(<56622..56726,57017..57120,58778..58860,58962..59063,59170..59227,59364..59416,59514..59592,60853..60949,61879..61948,62660..62779))
location: region:56622-62779:-1
so has part: feature:62660-62779:-1:exon
so has part: feature:61879-61948:-1:exon
so has part: feature:60853-60949:-1:exon
so has part: feature:59514-59592:-1:exon
so has part: feature:59364-59416:-1:exon
so has part: feature:59170-59227:-1:exon
so has part: feature:58962-59063:-1:exon
so has part: feature:58778-58860:-1:exon
so has part: feature:57017-57120:-1:exon
so has part: feature:56622-56726:-1:exon

XP_032939521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62660-62779:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:61879-61948:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60853-60949:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59514-59592:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:59364-59416:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:59170-59227:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:58962-59063:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:58778-58860:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:57017-57120:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:56622-56726:-1:exon

GPKOW
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: GPKOW
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 63195..92796
location: region:63195-92796:1
so has part: feature:63195-92796:1:exon
subclass of: SO_0000010

117009213
type: Gene
SIO_000068: ncbigene

position:63195:1
position: 63195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92796:1
position: 92796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63195-92796:1:exon

GPKOW
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: GPKOW
product: G-patch domain and KOW motifs
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042780085.1
SIO_010081: GPKOW
subclass of: SO_0000673
so part of: GPKOW
location: join(63195..63274,79639..79838,79871..79877,81531..81681,81925..81937,82159..82256,83125..83228,84588..84753,86656..86752,87674..87769,88763..88787,89245..89353,90668..90737,91674..91759,92590..92796)
location: region:63195-92796:1
so has part: feature:63195-63274:1:exon
so has part: feature:79639-79838:1:exon
so has part: feature:79871-79877:1:exon
so has part: feature:81531-81681:1:exon
so has part: feature:81925-81937:1:exon
so has part: feature:82159-82256:1:exon
so has part: feature:83125-83228:1:exon
so has part: feature:84588-84753:1:exon
so has part: feature:86656-86752:1:exon
so has part: feature:87674-87769:1:exon
so has part: feature:88763-88787:1:exon
so has part: feature:89245-89353:1:exon
so has part: feature:90668-90737:1:exon
so has part: feature:91674-91759:1:exon
so has part: feature:92590-92796:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:63195-63274:1:exon

position:63274:1
position: 63274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:79639-79838:1:exon

position:79639:1
position: 79639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79838:1
position: 79838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:79871-79877:1:exon

position:79871:1
position: 79871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79877:1
position: 79877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:81531-81681:1:exon

position:81531:1
position: 81531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81681:1
position: 81681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:81925-81937:1:exon

position:81925:1
position: 81925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81937:1
position: 81937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:82159-82256:1:exon

position:82159:1
position: 82159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82256:1
position: 82256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:83125-83228:1:exon

position:83125:1
position: 83125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83228:1
position: 83228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:84588-84753:1:exon

position:84588:1
position: 84588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84753:1
position: 84753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:86656-86752:1:exon

position:86656:1
position: 86656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86752:1
position: 86752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:87674-87769:1:exon

position:87674:1
position: 87674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87769:1
position: 87769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:88763-88787:1:exon

position:88763:1
position: 88763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88787:1
position: 88787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:89245-89353:1:exon

position:89245:1
position: 89245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89353:1
position: 89353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:90668-90737:1:exon

position:90668:1
position: 90668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90737:1
position: 90737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:91674-91759:1:exon

position:91674:1
position: 91674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91759:1
position: 91759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:92590-92796:1:exon

position:92590:1
position: 92590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLP2
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: PLP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(63990..69158)
location: region:63990-69158:-1
so has part: feature:63990-69158:-1:exon
subclass of: SO_0000010

117009386
type: Gene
SIO_000068: ncbigene

position:63990:-1
position: 63990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69158:-1
position: 69158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63990-69158:-1:exon

PLP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PLP2
product: proteolipid protein 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083628.1
SIO_010081: PLP2
subclass of: SO_0000673
so part of: PLP2
location: complement(join(63990..64328,64960..65047,65742..65837,66557..66709,69042..69158))
location: region:63990-69158:-1
so has part: feature:69042-69158:-1:exon
so has part: feature:66557-66709:-1:exon
so has part: feature:65742-65837:-1:exon
so has part: feature:64960-65047:-1:exon
so has part: feature:63990-64328:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:69042-69158:-1:exon

position:69042:-1
position: 69042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:66557-66709:-1:exon

position:66557:-1
position: 66557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66709:-1
position: 66709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:65742-65837:-1:exon

position:65742:-1
position: 65742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65837:-1
position: 65837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:64960-65047:-1:exon

position:64960:-1
position: 64960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65047:-1
position: 65047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:63990-64328:-1:exon

position:64328:-1
position: 64328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PLP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteolipid protein 2
translation: MESGGAQSCPGTCLAFSRTRKGLVLIGEIVLCLLTLICFGASRSGYAGLAAVELVFAALVLLAWSCRLPPRLQGLHWGWTDFTRCLIGAVLFLITSLIVIVGHRDGAGIAGGVFGILAGVLLGYDAFITLPTRQAHTAAPTESPDGA
SIO_010081: PLP2
subclass of: SO_0000673
so part of: PLP2
location: complement(join(64309..64328,64960..65047,65742..65837,66557..66709,69042..69128))
location: region:64309-69128:-1
so has part: feature:69042-69128:-1:exon
so has part: feature:66557-66709:-1:exon
so has part: feature:65742-65837:-1:exon
so has part: feature:64960-65047:-1:exon
so has part: feature:64309-64328:-1:exon

XP_032939519.1
type: Protein
SIO_000068: ncbiprotein

position:64309:-1
position: 64309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69128:-1
position: 69128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69042-69128:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66557-66709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:65742-65837:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:64960-65047:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:64309-64328:-1:exon

LOC117009387
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009387
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(70324..78680)
location: region:70324-78680:-1
so has part: feature:70324-78680:-1:exon
subclass of: SO_0000010

117009387
type: Gene
SIO_000068: ncbigene

position:70324:-1
position: 70324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78680:-1
position: 78680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70324-78680:-1:exon

LOC117009387
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009387
product: translation initiation factor IF-2-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083629.1
SIO_010081: LOC117009387
subclass of: SO_0000673
so part of: LOC117009387
location: complement(join(70324..70658,72064..72181,73376..73509,75252..75315,75976..76050,76821..76932,77542..77555,77850..78680))
location: region:70324-78680:-1
so has part: feature:77850-78680:-1:exon
so has part: feature:77542-77555:-1:exon
so has part: feature:76821-76932:-1:exon
so has part: feature:75976-76050:-1:exon
so has part: feature:75252-75315:-1:exon
so has part: feature:73376-73509:-1:exon
so has part: feature:72064-72181:-1:exon
so has part: feature:70324-70658:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:77850-78680:-1:exon

position:77850:-1
position: 77850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:77542-77555:-1:exon

position:77542:-1
position: 77542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77555:-1
position: 77555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:76821-76932:-1:exon

position:76821:-1
position: 76821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76932:-1
position: 76932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:75976-76050:-1:exon

position:75976:-1
position: 75976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76050:-1
position: 76050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:75252-75315:-1:exon

position:75252:-1
position: 75252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75315:-1
position: 75315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:73376-73509:-1:exon

position:73376:-1
position: 73376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73509:-1
position: 73509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:72064-72181:-1:exon

position:72064:-1
position: 72064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72181:-1
position: 72181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:70324-70658:-1:exon

position:70658:-1
position: 70658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009387
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009387
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translation initiation factor IF-2-like
translation: MPPPEGPSGPSVSVVVVVGGSCVLRYSRPPAPAPAPAPAPIRDGELVLLLRGLGPGAPPEPVAVTSFVGPEPRDLLPAGPELRSPSSAGQGWDMNWDGHRIQPRLPWSCRGARPVRVQSPGRPRRGFRAGAARGGPGPALRLHPGQ
SIO_010081: LOC117009387
subclass of: SO_0000673
so part of: LOC117009387
location: complement(join(72174..72181,73376..73509,75252..75315,75976..76050,76821..76932,77542..77555,77850..77883))
location: region:72174-77883:-1
so has part: feature:77850-77883:-1:exon
so has part: feature:77542-77555:-1:exon
so has part: feature:76821-76932:-1:exon
so has part: feature:75976-76050:-1:exon
so has part: feature:75252-75315:-1:exon
so has part: feature:73376-73509:-1:exon
so has part: feature:72174-72181:-1:exon

XP_032939520.1
type: Protein
SIO_000068: ncbiprotein

position:72174:-1
position: 72174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77883:-1
position: 77883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77850-77883:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:77542-77555:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:76821-76932:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:75976-76050:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:75252-75315:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:73376-73509:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:72174-72181:-1:exon

GPKOW
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: GPKOW
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-patch domain and KOW motifs-containing protein
translation: MAAGDGAAASEGSAGPGPVSFAFSRRAERRRPLPAGPCAEPGTGADADSDTDFLTAVEDRSWLATRPAPPPKQELVIPLRPAQRWRNPEPPSAEPGPNGTPPLWRHRRCRSCSRELLQGAAAGSSPTVDSGAAVTIPMQLPDREVATGPQPTPQDYEAVPVGQFGLAMLRGMGWSQGQGIGRTFPRVVPPLEQRPRPRGLGLGAEAAPPGTPKSGEPPQEGPAPGDTVSIESGPHRGVRGKVEALEPETGRALVRLQLGGQMVTVPGHGLRLLGASGRPPQAEEGAQGGDPRGEGARGESGPRATGFLGDPGLCISGGPPPAPPPHWLRRDLRVRCVDRSFRGGVFYNCKMQIEDLLAPDTCVCRTDDGRLVEGLPEASLETVVPRGGSERVMVVLGEHAGQVGRILERDPERGRALVQLGRDAAPPVLSLPYDSICHYLGGGDDD
SIO_010081: GPKOW
subclass of: SO_0000673
so part of: GPKOW
location: join(79655..79838,79871..79877,81531..81681,81925..81937,82159..82256,83125..83228,84588..84753,86656..86752,87674..87769,88763..88787,89245..89353,90668..90737,91674..91759,92590..92724)
location: region:79655-92724:1
so has part: feature:79655-79838:1:exon
so has part: feature:79871-79877:1:exon
so has part: feature:81531-81681:1:exon
so has part: feature:81925-81937:1:exon
so has part: feature:82159-82256:1:exon
so has part: feature:83125-83228:1:exon
so has part: feature:84588-84753:1:exon
so has part: feature:86656-86752:1:exon
so has part: feature:87674-87769:1:exon
so has part: feature:88763-88787:1:exon
so has part: feature:89245-89353:1:exon
so has part: feature:90668-90737:1:exon
so has part: feature:91674-91759:1:exon
so has part: feature:92590-92724:1:exon

XP_042636019.1
type: Protein
SIO_000068: ncbiprotein

position:79655:1
position: 79655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92724:1
position: 92724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79655-79838:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79871-79877:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:81531-81681:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:81925-81937:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:82159-82256:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83125-83228:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:84588-84753:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:86656-86752:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:87674-87769:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:88763-88787:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:89245-89353:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:90668-90737:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:91674-91759:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:92590-92724:1:exon

WDR45
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: WDR45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 93077..106098
location: region:93077-106098:1
so has part: feature:93077-106098:1:exon
subclass of: SO_0000010

117009393
type: Gene
SIO_000068: ncbigene

position:93077:1
position: 93077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106098:1
position: 106098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93077-106098:1:exon

WDR45
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: WDR45
product: WD repeat domain 45, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033083634.1
SIO_010081: WDR45
subclass of: SO_0000673
so part of: WDR45
location: join(93077..93326,94080..94154,95077..95181,95971..96067,96877..96971,97898..97977,99210..99418,101297..101398,102944..103086,105936..106098)
location: region:93077-106098:1
so has part: feature:93077-93326:1:exon
so has part: feature:94080-94154:1:exon
so has part: feature:95077-95181:1:exon
so has part: feature:95971-96067:1:exon
so has part: feature:96877-96971:1:exon
so has part: feature:97898-97977:1:exon
so has part: feature:99210-99418:1:exon
so has part: feature:101297-101398:1:exon
so has part: feature:102944-103086:1:exon
so has part: feature:105936-106098:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:93077-93326:1:exon

position:93326:1
position: 93326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:94080-94154:1:exon

position:94080:1
position: 94080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94154:1
position: 94154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:95077-95181:1:exon

position:95077:1
position: 95077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95181:1
position: 95181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:95971-96067:1:exon

position:95971:1
position: 95971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96067:1
position: 96067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:96877-96971:1:exon

position:96877:1
position: 96877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96971:1
position: 96971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:97898-97977:1:exon

position:97898:1
position: 97898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97977:1
position: 97977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:99210-99418:1:exon

position:99210:1
position: 99210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99418:1
position: 99418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:101297-101398:1:exon

position:101297:1
position: 101297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101398:1
position: 101398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:102944-103086:1:exon

position:102944:1
position: 102944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103086:1
position: 103086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:105936-106098:1:exon

position:105936:1
position: 105936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WDR45
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: WDR45
product: WD repeat domain 45, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_033083635.1
SIO_010081: WDR45
subclass of: SO_0000673
so part of: WDR45
location: join(93077..93326,94080..94154,95077..95181,95971..96067,96877..96971,97898..97977,99210..99418,101297..101398,102944..103031,103181..103235,105936..106098)
location: region:93077-106098:1
so has part: feature:93077-93326:1:exon
so has part: feature:94080-94154:1:exon
so has part: feature:95077-95181:1:exon
so has part: feature:95971-96067:1:exon
so has part: feature:96877-96971:1:exon
so has part: feature:97898-97977:1:exon
so has part: feature:99210-99418:1:exon
so has part: feature:101297-101398:1:exon
so has part: feature:102944-103031:1:exon
so has part: feature:103181-103235:1:exon
so has part: feature:105936-106098:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:93077-93326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94080-94154:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:95077-95181:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95971-96067:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:96877-96971:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:97898-97977:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:99210-99418:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:101297-101398:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:102944-103031:1:exon

position:103031:1
position: 103031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:103181-103235:1:exon

position:103181:1
position: 103181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103235:1
position: 103235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:105936-106098:1:exon

WDR45
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: WDR45
product: WD repeat domain 45, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033083637.1
SIO_010081: WDR45
subclass of: SO_0000673
so part of: WDR45
location: join(93077..93326,94080..94154,95077..95181,95971..96067,96877..96971,97898..97977,99210..99275,99363..99418,101297..101398,102944..103086,105936..106098)
location: region:93077-106098:1
so has part: feature:93077-93326:1:exon
so has part: feature:94080-94154:1:exon
so has part: feature:95077-95181:1:exon
so has part: feature:95971-96067:1:exon
so has part: feature:96877-96971:1:exon
so has part: feature:97898-97977:1:exon
so has part: feature:99210-99275:1:exon
so has part: feature:99363-99418:1:exon
so has part: feature:101297-101398:1:exon
so has part: feature:102944-103086:1:exon
so has part: feature:105936-106098:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:93077-93326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94080-94154:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:95077-95181:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95971-96067:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:96877-96971:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:97898-97977:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:99210-99275:1:exon

position:99275:1
position: 99275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:99363-99418:1:exon

position:99363:1
position: 99363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:101297-101398:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:102944-103086:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:105936-106098:1:exon

WDR45
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: WDR45
product: WD repeat domain 45, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033083638.1
SIO_010081: WDR45
subclass of: SO_0000673
so part of: WDR45
location: join(93077..93326,94080..94154,95077..95181,95971..96067,96877..96971,97898..97977,99210..99275,99506..99561,101297..101398,102944..103086,105936..106098)
location: region:93077-106098:1
so has part: feature:93077-93326:1:exon
so has part: feature:94080-94154:1:exon
so has part: feature:95077-95181:1:exon
so has part: feature:95971-96067:1:exon
so has part: feature:96877-96971:1:exon
so has part: feature:97898-97977:1:exon
so has part: feature:99210-99275:1:exon
so has part: feature:99506-99561:1:exon
so has part: feature:101297-101398:1:exon
so has part: feature:102944-103086:1:exon
so has part: feature:105936-106098:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:93077-93326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94080-94154:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:95077-95181:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95971-96067:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:96877-96971:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:97898-97977:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:99210-99275:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:99506-99561:1:exon

position:99506:1
position: 99506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99561:1
position: 99561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:101297-101398:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:102944-103086:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:105936-106098:1:exon

WDR45
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: WDR45
product: WD repeat domain 45, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033083636.1
SIO_010081: WDR45
subclass of: SO_0000673
so part of: WDR45
location: join(93077..93326,94080..94154,95077..95181,95971..96067,96877..96971,97898..97977,99210..99275,99650..99705,101297..101398,102944..103086,105936..106098)
location: region:93077-106098:1
so has part: feature:93077-93326:1:exon
so has part: feature:94080-94154:1:exon
so has part: feature:95077-95181:1:exon
so has part: feature:95971-96067:1:exon
so has part: feature:96877-96971:1:exon
so has part: feature:97898-97977:1:exon
so has part: feature:99210-99275:1:exon
so has part: feature:99650-99705:1:exon
so has part: feature:101297-101398:1:exon
so has part: feature:102944-103086:1:exon
so has part: feature:105936-106098:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:93077-93326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94080-94154:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:95077-95181:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95971-96067:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:96877-96971:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:97898-97977:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:99210-99275:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:99650-99705:1:exon

position:99650:1
position: 99650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99705:1
position: 99705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:101297-101398:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:102944-103086:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:105936-106098:1:exon

WDR45
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: WDR45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat domain phosphoinositide-interacting protein 4 isoform X1
translation: MAQARGVNSLRFNQDQSCFCVAMDSGVRIFNVEPLMEKGHLDAEQVGSVGLVEMLNRSNLLAIVGGGSHPKFPDASVLIWDDAREGKDKLVLEFSFPKPVLAVRMRHDRLVVALQSRLFVFSFPHRPSKLFEFDTRDNPKGIVDLCPSLERALLVFPGHKCGSLQLVDLGSAKPGTSSAPVTINAHQSEVGCAALSPSGSLVASASRRGTLIRLFCTQSRARLLELRRGTDPATLYCLAFSPDCSFLCAVSDKGTGHVFALRDTRLNRRSALARVGKVGPVLGPYVESQWSLASFNVPAEAPGVCAFGRAGRSPSSVIAVCVDGTFHKYVFSPDGNCNREAFDVFLDICDDDDF
SIO_010081: WDR45
subclass of: SO_0000673
so part of: WDR45
location: join(93278..93326,94080..94154,95077..95181,95971..96067,96877..96971,97898..97977,99210..99418,101297..101398,102944..103086,105936..106045)
location: region:93278-106045:1
so has part: feature:93278-93326:1:exon
so has part: feature:94080-94154:1:exon
so has part: feature:95077-95181:1:exon
so has part: feature:95971-96067:1:exon
so has part: feature:96877-96971:1:exon
so has part: feature:97898-97977:1:exon
so has part: feature:99210-99418:1:exon
so has part: feature:101297-101398:1:exon
so has part: feature:102944-103086:1:exon
so has part: feature:105936-106045:1:exon

XP_032939525.1
type: Protein
SIO_000068: ncbiprotein

position:93278:1
position: 93278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106045:1
position: 106045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93278-93326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94080-94154:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:95077-95181:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95971-96067:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:96877-96971:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:97898-97977:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:99210-99418:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:101297-101398:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:102944-103086:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:105936-106045:1:exon

WDR45
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: WDR45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat domain phosphoinositide-interacting protein 4 isoform X2
translation: MAQARGVNSLRFNQDQSCFCVAMDSGVRIFNVEPLMEKGHLDAEQVGSVGLVEMLNRSNLLAIVGGGSHPKFPDASVLIWDDAREGKDKLVLEFSFPKPVLAVRMRHDRLVVALQSRLFVFSFPHRPSKLFEFDTRDNPKGIVDLCPSLERALLVFPGHKCGSLQLVDLGSAKPGTSSAPVTINAHQSEVGCAALSPSGSLVASASRRGTLIRLFCTQSRARLLELRRGTDPATLYCLAFSPDCSFLCAVSDKGTGHVFALRDTRLNRRSALARVGKVGPVLGPYVESQWSLASFNVPAEAPGVCAFGRAGRSPSSVIAVCVDGTFHKYVFSPDGNCNREAFDVFLDICDDDDF
SIO_010081: WDR45
subclass of: SO_0000673
so part of: WDR45
location: join(93278..93326,94080..94154,95077..95181,95971..96067,96877..96971,97898..97977,99210..99418,101297..101398,102944..103031,103181..103235,105936..106045)
location: region:93278-106045:1
so has part: feature:93278-93326:1:exon
so has part: feature:94080-94154:1:exon
so has part: feature:95077-95181:1:exon
so has part: feature:95971-96067:1:exon
so has part: feature:96877-96971:1:exon
so has part: feature:97898-97977:1:exon
so has part: feature:99210-99418:1:exon
so has part: feature:101297-101398:1:exon
so has part: feature:102944-103031:1:exon
so has part: feature:103181-103235:1:exon
so has part: feature:105936-106045:1:exon

XP_032939526.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93278-93326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94080-94154:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:95077-95181:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95971-96067:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:96877-96971:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:97898-97977:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:99210-99418:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:101297-101398:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:102944-103031:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:103181-103235:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:105936-106045:1:exon

WDR45
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: WDR45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat domain phosphoinositide-interacting protein 4 isoform X4
translation: MAQARGVNSLRFNQDQSCFCVAMDSGVRIFNVEPLMEKGHLDAEQVGSVGLVEMLNRSNLLAIVGGGSHPKFPDASVLIWDDAREGKDKLVLEFSFPKPVLAVRMRHDRLVVALQSRLFVFSFPHRPSKLFEFDTRDNPKGIVDLCPSLERALLVFPGHKCGSLQLVDLGSAKPGTSSAPVTINAHQSESRARLLELRRGTDPATLYCLAFSPDCSFLCAVSDKGTGHVFALRDTRLNRRSALARVGKVGPVLGPYVESQWSLASFNVPAEAPGVCAFGRAGRSPSSVIAVCVDGTFHKYVFSPDGNCNREAFDVFLDICDDDDF
SIO_010081: WDR45
subclass of: SO_0000673
so part of: WDR45
location: join(93278..93326,94080..94154,95077..95181,95971..96067,96877..96971,97898..97977,99210..99275,99363..99418,101297..101398,102944..103086,105936..106045)
location: region:93278-106045:1
so has part: feature:93278-93326:1:exon
so has part: feature:94080-94154:1:exon
so has part: feature:95077-95181:1:exon
so has part: feature:95971-96067:1:exon
so has part: feature:96877-96971:1:exon
so has part: feature:97898-97977:1:exon
so has part: feature:99210-99275:1:exon
so has part: feature:99363-99418:1:exon
so has part: feature:101297-101398:1:exon
so has part: feature:102944-103086:1:exon
so has part: feature:105936-106045:1:exon

XP_032939528.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93278-93326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94080-94154:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:95077-95181:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95971-96067:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:96877-96971:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:97898-97977:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:99210-99275:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:99363-99418:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:101297-101398:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:102944-103086:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:105936-106045:1:exon

WDR45
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: WDR45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat domain phosphoinositide-interacting protein 4 isoform X5
translation: MAQARGVNSLRFNQDQSCFCVAMDSGVRIFNVEPLMEKGHLDAEQVGSVGLVEMLNRSNLLAIVGGGSHPKFPDASVLIWDDAREGKDKLVLEFSFPKPVLAVRMRHDRLVVALQSRLFVFSFPHRPSKLFEFDTRDNPKGIVDLCPSLERALLVFPGHKCGSLQLVDLGSAKPGTSSAPVTINAHQSESRARLLELRRGTDPATLYCLAFSPDCSFLCAVSDKGTGHVFALRDTRLNRRSALARVGKVGPVLGPYVESQWSLASFNVPAEAPGVCAFGRAGRSPSSVIAVCVDGTFHKYVFSPDGNCNREAFDVFLDICDDDDF
SIO_010081: WDR45
subclass of: SO_0000673
so part of: WDR45
location: join(93278..93326,94080..94154,95077..95181,95971..96067,96877..96971,97898..97977,99210..99275,99506..99561,101297..101398,102944..103086,105936..106045)
location: region:93278-106045:1
so has part: feature:93278-93326:1:exon
so has part: feature:94080-94154:1:exon
so has part: feature:95077-95181:1:exon
so has part: feature:95971-96067:1:exon
so has part: feature:96877-96971:1:exon
so has part: feature:97898-97977:1:exon
so has part: feature:99210-99275:1:exon
so has part: feature:99506-99561:1:exon
so has part: feature:101297-101398:1:exon
so has part: feature:102944-103086:1:exon
so has part: feature:105936-106045:1:exon

XP_032939529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93278-93326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94080-94154:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:95077-95181:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95971-96067:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:96877-96971:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:97898-97977:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:99210-99275:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:99506-99561:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:101297-101398:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:102944-103086:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:105936-106045:1:exon

WDR45
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: WDR45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat domain phosphoinositide-interacting protein 4 isoform X3
translation: MAQARGVNSLRFNQDQSCFCVAMDSGVRIFNVEPLMEKGHLDAEQVGSVGLVEMLNRSNLLAIVGGGSHPKFPDASVLIWDDAREGKDKLVLEFSFPKPVLAVRMRHDRLVVALQSRLFVFSFPHRPSKLFEFDTRDNPKGIVDLCPSLERALLVFPGHKCGSLQLVDLGSAKPGTSSAPVTINAHQSESRARLLELRRGTDPATLYCLAFSPDCSFLCAVSDKGTGHVFALRDTRLNRRSALARVGKVGPVLGPYVESQWSLASFNVPAEAPGVCAFGRAGRSPSSVIAVCVDGTFHKYVFSPDGNCNREAFDVFLDICDDDDF
SIO_010081: WDR45
subclass of: SO_0000673
so part of: WDR45
location: join(93278..93326,94080..94154,95077..95181,95971..96067,96877..96971,97898..97977,99210..99275,99650..99705,101297..101398,102944..103086,105936..106045)
location: region:93278-106045:1
so has part: feature:93278-93326:1:exon
so has part: feature:94080-94154:1:exon
so has part: feature:95077-95181:1:exon
so has part: feature:95971-96067:1:exon
so has part: feature:96877-96971:1:exon
so has part: feature:97898-97977:1:exon
so has part: feature:99210-99275:1:exon
so has part: feature:99650-99705:1:exon
so has part: feature:101297-101398:1:exon
so has part: feature:102944-103086:1:exon
so has part: feature:105936-106045:1:exon

XP_032939527.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93278-93326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94080-94154:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:95077-95181:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95971-96067:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:96877-96971:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:97898-97977:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:99210-99275:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:99650-99705:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:101297-101398:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:102944-103086:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:105936-106045:1:exon

HDAC6
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: HDAC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(106128..122844)
location: region:106128-122844:-1
so has part: feature:106128-122844:-1:exon
subclass of: SO_0000010

117009392
type: Gene
SIO_000068: ncbigene

position:106128:-1
position: 106128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122844:-1
position: 122844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106128-122844:-1:exon

HDAC6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: HDAC6
product: histone deacetylase 6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083633.1
SIO_010081: HDAC6
subclass of: SO_0000673
so part of: HDAC6
location: complement(join(106128..106517,107513..107641,109778..109933,111102..111346,112161..112335,113270..113419,114736..114925,116879..116947,117023..117156,118620..118788,121093..121221,122695..122844))
location: region:106128-122844:-1
so has part: feature:122695-122844:-1:exon
so has part: feature:121093-121221:-1:exon
so has part: feature:118620-118788:-1:exon
so has part: feature:117023-117156:-1:exon
so has part: feature:116879-116947:-1:exon
so has part: feature:114736-114925:-1:exon
so has part: feature:113270-113419:-1:exon
so has part: feature:112161-112335:-1:exon
so has part: feature:111102-111346:-1:exon
so has part: feature:109778-109933:-1:exon
so has part: feature:107513-107641:-1:exon
so has part: feature:106128-106517:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122695-122844:-1:exon

position:122695:-1
position: 122695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:121093-121221:-1:exon

position:121093:-1
position: 121093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121221:-1
position: 121221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:118620-118788:-1:exon

position:118620:-1
position: 118620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118788:-1
position: 118788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:117023-117156:-1:exon

position:117023:-1
position: 117023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117156:-1
position: 117156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:116879-116947:-1:exon

position:116879:-1
position: 116879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116947:-1
position: 116947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:114736-114925:-1:exon

position:114736:-1
position: 114736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114925:-1
position: 114925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:113270-113419:-1:exon

position:113270:-1
position: 113270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113419:-1
position: 113419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:112161-112335:-1:exon

position:112161:-1
position: 112161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112335:-1
position: 112335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:111102-111346:-1:exon

position:111102:-1
position: 111102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111346:-1
position: 111346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:109778-109933:-1:exon

position:109778:-1
position: 109778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109933:-1
position: 109933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:107513-107641:-1:exon

position:107513:-1
position: 107513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107641:-1
position: 107641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:106128-106517:-1:exon

position:106517:-1
position: 106517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HDAC6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: HDAC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 6
translation: MEEHRNTWDSHHPECPQRLARILQRLQELGLAQRCLRLPAPPASPRQLRACHTRAHVRALSRVPALSPRELRALSQRYNSVYLCPKSYSAARRAAGGACAAAGAVIGGQVRSALAVVRPPGHHARPGSAGGFCLFNNVGVAVRHAQSLAGTPLRVLILDWDVHHGNGTQEIFEEDPSVLYVSLHRHDGSFFPGGAGGSPRRRGRGPGQGFTLNVGWGAPRVGDPEYLAALSRLVLPVACQFGPELVLVSAGFDAGRGDPLGGCQVSPQTFGLITHLLGALAGGRLVLVLEGGYNLAVTAEGVGQCLGVLLGDPPSLPPPGTPQPGALRALGRTLRAQRGCWSCLRLPRVEPPQNSPKEGEGGDDVTPAADDVTAPPPLDDAIRRLGALQLGEASGGGVKADQGAEPPPSPAPSAAAASAPCWEEEEELEEGALFAVTPLRDCPHLGAVSPPPAGGALGEPLPPPCGTCGSRRENWLCLTCHQVQCGRYVGGHMVQHGESSGHPLVLSLRDLAAWCYPCGGYVSHPVLLPTKTFIYRLKFGTDPPTSSF
SIO_010081: HDAC6
subclass of: SO_0000673
so part of: HDAC6
location: complement(join(106446..106517,107513..107641,109778..109933,111102..111346,112161..112335,113270..113419,114736..114925,116879..116947,117023..117156,118620..118788,121093..121221,122695..122723))
location: region:106446-122723:-1
so has part: feature:122695-122723:-1:exon
so has part: feature:121093-121221:-1:exon
so has part: feature:118620-118788:-1:exon
so has part: feature:117023-117156:-1:exon
so has part: feature:116879-116947:-1:exon
so has part: feature:114736-114925:-1:exon
so has part: feature:113270-113419:-1:exon
so has part: feature:112161-112335:-1:exon
so has part: feature:111102-111346:-1:exon
so has part: feature:109778-109933:-1:exon
so has part: feature:107513-107641:-1:exon
so has part: feature:106446-106517:-1:exon

XP_032939524.1
type: Protein
SIO_000068: ncbiprotein

position:106446:-1
position: 106446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122723:-1
position: 122723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122695-122723:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:121093-121221:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:118620-118788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:117023-117156:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:116879-116947:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:114736-114925:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:113270-113419:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:112161-112335:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:111102-111346:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:109778-109933:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:107513-107641:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:106446-106517:-1:exon

GATA1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: GATA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(145107..155341)
location: region:145107-155341:-1
so has part: feature:145107-155341:-1:exon
subclass of: SO_0000010

117009398
type: Gene
SIO_000068: ncbigene

position:145107:-1
position: 145107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155341:-1
position: 155341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145107-155341:-1:exon

GATA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: GATA1
product: GATA binding protein 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083644.1
SIO_010081: GATA1
subclass of: SO_0000673
so part of: GATA1
location: complement(join(145107..145454,147436..147561,150369..150514,152922..153077,155116..155341))
location: region:145107-155341:-1
so has part: feature:155116-155341:-1:exon
so has part: feature:152922-153077:-1:exon
so has part: feature:150369-150514:-1:exon
so has part: feature:147436-147561:-1:exon
so has part: feature:145107-145454:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:155116-155341:-1:exon

position:155116:-1
position: 155116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:152922-153077:-1:exon

position:152922:-1
position: 152922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153077:-1
position: 153077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:150369-150514:-1:exon

position:150369:-1
position: 150369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150514:-1
position: 150514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:147436-147561:-1:exon

position:147436:-1
position: 147436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147561:-1
position: 147561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:145107-145454:-1:exon

position:145454:-1
position: 145454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GATA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: GATA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: erythroid transcription factor
translation: MEFVALGGPEGPPPFSDEPGTFLGLGAPEGLEPGGLLGPYPPPGRLSLVSWPEGGSLGGPSWTPPPPEPPRFLELLQPPRSPPQGPLLPPPGPACEARECVNCGATATPLWRRDGTGHYLCNACGLYHRLNGHNRPLIRPKKRLLVSKRAGTVCSNCQTSTTTLWRRSPRGDPVCNACGLYYKLHRVNRPLTMRKDGIQTRNRKVSAKGKKRRQGGGAGPGGVPETSAGPPLPPPAPPPPPPEDPASLFALGPFLLPFPPAGPFLGGPGSDFAAPPAPSAAPPGLSPQL
SIO_010081: GATA1
subclass of: SO_0000673
so part of: GATA1
location: complement(join(145143..145454,147436..147561,150369..150514,152922..153077,155116..155245))
location: region:145143-155245:-1
so has part: feature:155116-155245:-1:exon
so has part: feature:152922-153077:-1:exon
so has part: feature:150369-150514:-1:exon
so has part: feature:147436-147561:-1:exon
so has part: feature:145143-145454:-1:exon

XP_032939535.1
type: Protein
SIO_000068: ncbiprotein

position:145143:-1
position: 145143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155245:-1
position: 155245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155116-155245:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:152922-153077:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150369-150514:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:147436-147561:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:145143-145454:-1:exon

PORCN
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: PORCN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <160847..173252
location: region:160847-173252:1
so has part: feature:160847-173252:1:exon
subclass of: SO_0000010

117009288
type: Gene
SIO_000068: ncbigene

position:160847:1
position: 160847
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:173252:1
position: 173252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160847-173252:1:exon

PORCN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PORCN
product: porcupine O-acyltransferase
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083521.2
SIO_010081: PORCN
subclass of: SO_0000673
so part of: PORCN
location: join(<160847..160986,162814..162828,165339..165464,167905..168005,168821..168897,170466..170529,172194..172279,172749..172859,172952..173252)
location: region:160847-173252:1
so has part: feature:160847-160986:1:exon
so has part: feature:162814-162828:1:exon
so has part: feature:165339-165464:1:exon
so has part: feature:167905-168005:1:exon
so has part: feature:168821-168897:1:exon
so has part: feature:170466-170529:1:exon
so has part: feature:172194-172279:1:exon
so has part: feature:172749-172859:1:exon
so has part: feature:172952-173252:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:160847-160986:1:exon

position:160986:1
position: 160986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:162814-162828:1:exon

position:162814:1
position: 162814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162828:1
position: 162828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:165339-165464:1:exon

position:165339:1
position: 165339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165464:1
position: 165464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:167905-168005:1:exon

position:167905:1
position: 167905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168005:1
position: 168005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:168821-168897:1:exon

position:168821:1
position: 168821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168897:1
position: 168897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:170466-170529:1:exon

position:170466:1
position: 170466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170529:1
position: 170529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:172194-172279:1:exon

position:172194:1
position: 172194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172279:1
position: 172279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:172749-172859:1:exon

position:172749:1
position: 172749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172859:1
position: 172859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:172952-173252:1:exon

position:172952:1
position: 172952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PORCN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PORCN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-serine O-palmitoleoyltransferase porcupine
translation: CPQSVAWLRKALRSLGLALLCLLVSTCLAPFLFSSLLPLYGARALRRSVFARWLRAYESALSFHFSNYFVAFLSEATATLAGSGTSLQHEHLRWDLAVSRPLRVELPRSMAEVVTNWNLPMSRWLHTYVFQTARRLGTFAAVLGTYAASALLHGLSFHLAAVLLSLGLITYAEHALRQRLAAIFDACVLSKRCPPNCSHRHKNTLWVRALNGALGALALFHLSYLGALFDVEAEDTVEEQGYGMAYTVRKWSELNWASHWVTLGCWVLARLLR
SIO_010081: PORCN
subclass of: SO_0000673
so part of: PORCN
location: join(<160847..160986,162814..162828,165339..165464,167905..168005,168821..168897,170466..170529,172194..172279,172749..172859,172952..173053)
location: region:160847-173053:1
so has part: feature:160847-160986:1:exon
so has part: feature:162814-162828:1:exon
so has part: feature:165339-165464:1:exon
so has part: feature:167905-168005:1:exon
so has part: feature:168821-168897:1:exon
so has part: feature:170466-170529:1:exon
so has part: feature:172194-172279:1:exon
so has part: feature:172749-172859:1:exon
so has part: feature:172952-173053:1:exon

XP_032939412.1
type: Protein
SIO_000068: ncbiprotein

position:173053:1
position: 173053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160847-160986:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:162814-162828:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:165339-165464:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:167905-168005:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:168821-168897:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:170466-170529:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:172194-172279:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:172749-172859:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:172952-173053:1:exon

SLC35A2
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: SLC35A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(173369..183900)
location: region:173369-183900:-1
so has part: feature:173369-183900:-1:exon
subclass of: SO_0000010

117009322
type: Gene
SIO_000068: ncbigene

position:173369:-1
position: 173369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183900:-1
position: 183900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173369-183900:-1:exon

SLC35A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SLC35A2
product: solute carrier family 35 member A2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_033083561.1
SIO_010081: SLC35A2
subclass of: SO_0000673
so part of: SLC35A2
location: complement(join(173369..174253,179050..179711,181782..181933,183263..183445,183837..183900))
location: region:173369-183900:-1
so has part: feature:183837-183900:-1:exon
so has part: feature:183263-183445:-1:exon
so has part: feature:181782-181933:-1:exon
so has part: feature:179050-179711:-1:exon
so has part: feature:173369-174253:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:183837-183900:-1:exon

position:183837:-1
position: 183837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:183263-183445:-1:exon

position:183263:-1
position: 183263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183445:-1
position: 183445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:181782-181933:-1:exon

position:181782:-1
position: 181782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181933:-1
position: 181933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:179050-179711:-1:exon

position:179050:-1
position: 179050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179711:-1
position: 179711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:173369-174253:-1:exon

position:174253:-1
position: 174253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC35A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SLC35A2
product: solute carrier family 35 member A2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033083562.2
SIO_010081: SLC35A2
subclass of: SO_0000673
so part of: SLC35A2
location: complement(join(173369..174253,179054..179711,181782..181933,183263..183407))
location: region:173369-183407:-1
so has part: feature:183263-183407:-1:exon
so has part: feature:181782-181933:-1:exon
so has part: feature:179054-179711:-1:exon
so has part: feature:173369-174253:-1:exon

position:183407:-1
position: 183407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183263-183407:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181782-181933:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:179054-179711:-1:exon

position:179054:-1
position: 179054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:173369-174253:-1:exon

SLC35A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SLC35A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-galactose translocator isoform X2
translation: MAEAMKGSACLLLLLIQHRGSVRQTAVTLHEAVVGQFGDTLRLAVPSLIYTLQNNLQYVAISNLPAATFQVTYQLKILTTALFSVLLLGTALSRLQWLSLALLFAGVALVQAEQARAVPSAAALSPSPGPEAPAQSYAVGLAAVAASCLSSGFAGVYFERLLKRSGGSIWVRNVQLGAVGTAVGLGAMLAAEGPAVAALGFFYGYNGAVWAVVVNQAAGGLLVAVVVRYADNILKGFATALSILASTAASAHLFGFRPRAPFLAGTAMVLAAVVLYGRPRGAGGRSQDSGLPTRTRAPDGTQRPLKNPYGPSPSPLSL
SIO_010081: SLC35A2
subclass of: SO_0000673
so part of: SLC35A2
location: complement(join(174165..174253,179054..179711,181782..181933,183263..183320))
location: region:174165-183320:-1
so has part: feature:183263-183320:-1:exon
so has part: feature:181782-181933:-1:exon
so has part: feature:179054-179711:-1:exon
so has part: feature:174165-174253:-1:exon

XP_032939453.1
type: Protein
SIO_000068: ncbiprotein

position:174165:-1
position: 174165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183320:-1
position: 183320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183263-183320:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181782-181933:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:179054-179711:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:174165-174253:-1:exon

SLC35A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SLC35A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-galactose translocator isoform X1
translation: MAAPGTADGGGGSGDSAGPATVSRRVKYASLGVLVLQNASLVLSIRYVRTLPGERFLPTTAVVMAEAMKGSACLLLLLIQHRGSVRQTAVTLHEAVVGQFGDTLRLAVPSLIYTLQNNLQYVAISNLPAATFQVTYQLKILTTALFSVLLLGTALSRLQWLSLALLFAGVALVQAEQARAVPSAAALSPSPGPEAPAQSYAVGLAAVAASCLSSGFAGVYFERLLKRSGGSIWVRNVQLGAVGTAVGLGAMLAAEGPAVAALGFFYGYNGAVWAVVVNQAAGGLLVAVVVRYADNILKGFATALSILASTAASAHLFGFRPRAPFLAGTAMVLAAVVLYGRPRGAGGRSQDSGKSPNKDKGT
SIO_010081: SLC35A2
subclass of: SO_0000673
so part of: SLC35A2
location: complement(join(174226..174253,179050..179711,181782..181933,183263..183445,183837..183900))
location: region:174226-183900:-1
so has part: feature:183837-183900:-1:exon
so has part: feature:183263-183445:-1:exon
so has part: feature:181782-181933:-1:exon
so has part: feature:179050-179711:-1:exon
so has part: feature:174226-174253:-1:exon

XP_032939452.1
type: Protein
SIO_000068: ncbiprotein

position:174226:-1
position: 174226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183837-183900:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:183263-183445:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181782-181933:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:179050-179711:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:174226-174253:-1:exon

LOC117009323
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009323
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(175982..178668)
location: region:175982-178668:-1
so has part: feature:175982-178668:-1:exon
subclass of: SO_0000011

117009323
type: Gene
SIO_000068: ncbigene

position:175982:-1
position: 175982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178668:-1
position: 178668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175982-178668:-1:exon

LOC117009323
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117009323
product: uncharacterized LOC117009323, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004420459.1
SIO_010081: LOC117009323
subclass of: SO_0000673
so part of: LOC117009323
location: complement(join(175982..176477,176766..177496,177562..177885,178638..178668))
location: region:175982-178668:-1
so has part: feature:178638-178668:-1:exon
so has part: feature:177562-177885:-1:exon
so has part: feature:176766-177496:-1:exon
so has part: feature:175982-176477:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:178638-178668:-1:exon

position:178638:-1
position: 178638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:177562-177885:-1:exon

position:177562:-1
position: 177562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177885:-1
position: 177885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:176766-177496:-1:exon

position:176766:-1
position: 176766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177496:-1
position: 177496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:175982-176477:-1:exon

position:176477:-1
position: 176477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009323
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117009323
product: uncharacterized LOC117009323, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004420462.1
SIO_010081: LOC117009323
subclass of: SO_0000673
so part of: LOC117009323
location: complement(join(175989..176477,176766..177496,177593..177666))
location: region:175989-177666:-1
so has part: feature:177593-177666:-1:exon
so has part: feature:176766-177496:-1:exon
so has part: feature:175989-176477:-1:exon

position:175989:-1
position: 175989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177666:-1
position: 177666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177593-177666:-1:exon

position:177593:-1
position: 177593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:176766-177496:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:175989-176477:-1:exon

LOC117009323
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117009323
product: uncharacterized LOC117009323, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004420460.1
SIO_010081: LOC117009323
subclass of: SO_0000673
so part of: LOC117009323
location: complement(join(175989..176500,176817..177496,177562..177635))
location: region:175989-177635:-1
so has part: feature:177562-177635:-1:exon
so has part: feature:176817-177496:-1:exon
so has part: feature:175989-176500:-1:exon

position:177635:-1
position: 177635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177562-177635:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:176817-177496:-1:exon

position:176817:-1
position: 176817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:175989-176500:-1:exon

position:176500:-1
position: 176500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009323
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117009323
product: uncharacterized LOC117009323, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004420461.1
SIO_010081: LOC117009323
subclass of: SO_0000673
so part of: LOC117009323
location: complement(join(175989..176469,176801..177496,177562..177635))
location: region:175989-177635:-1
so has part: feature:177562-177635:-1:exon
so has part: feature:176801-177496:-1:exon
so has part: feature:175989-176469:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:177562-177635:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:176801-177496:-1:exon

position:176801:-1
position: 176801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:175989-176469:-1:exon

position:176469:-1
position: 176469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009320
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009320
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 184301..199031
location: region:184301-199031:1
so has part: feature:184301-199031:1:exon

117009320
type: Gene
SIO_000068: ncbigene

position:184301:1
position: 184301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199031:1
position: 199031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184301-199031:1:exon

LOC117009320
type: Exon
subclass of: SO_0000147
RO_0002162: 91951
gene: LOC117009320
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC117009320
subclass of: SO_0000673
so part of: LOC117009320
location: 184301..184535
location: region:184301-184535:1
so has part: feature:184301-184535:1:exon

position:184535:1
position: 184535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184301-184535:1:exon

LOC117009320
type: Exon
subclass of: SO_0000147
RO_0002162: 91951
gene: LOC117009320
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC117009320
subclass of: SO_0000673
so part of: LOC117009320
location: 186841..186944
location: region:186841-186944:1
so has part: feature:186841-186944:1:exon

position:186841:1
position: 186841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186944:1
position: 186944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186841-186944:1:exon

LOC117009320
type: Exon
subclass of: SO_0000147
RO_0002162: 91951
gene: LOC117009320
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC117009320
subclass of: SO_0000673
so part of: LOC117009320
location: 188097..188204
location: region:188097-188204:1
so has part: feature:188097-188204:1:exon

position:188097:1
position: 188097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188204:1
position: 188204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188097-188204:1:exon

LOC117009320
type: Exon
subclass of: SO_0000147
RO_0002162: 91951
gene: LOC117009320
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC117009320
subclass of: SO_0000673
so part of: LOC117009320
location: 190143..190297
location: region:190143-190297:1
so has part: feature:190143-190297:1:exon

position:190143:1
position: 190143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190297:1
position: 190297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190143-190297:1:exon

LOC117009320
type: Exon
subclass of: SO_0000147
RO_0002162: 91951
gene: LOC117009320
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC117009320
subclass of: SO_0000673
so part of: LOC117009320
location: 191740..191830
location: region:191740-191830:1
so has part: feature:191740-191830:1:exon

position:191740:1
position: 191740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191830:1
position: 191830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191740-191830:1:exon

LOC117009320
type: Exon
subclass of: SO_0000147
RO_0002162: 91951
gene: LOC117009320
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC117009320
subclass of: SO_0000673
so part of: LOC117009320
location: 192113..192212
location: region:192113-192212:1
so has part: feature:192113-192212:1:exon

position:192113:1
position: 192113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192212:1
position: 192212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192113-192212:1:exon

LOC117009320
type: Exon
subclass of: SO_0000147
RO_0002162: 91951
gene: LOC117009320
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC117009320
subclass of: SO_0000673
so part of: LOC117009320
location: 194535..194858
location: region:194535-194858:1
so has part: feature:194535-194858:1:exon

position:194535:1
position: 194535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194858:1
position: 194858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194535-194858:1:exon

LOC117009320
type: Exon
subclass of: SO_0000147
RO_0002162: 91951
gene: LOC117009320
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC117009320
subclass of: SO_0000673
so part of: LOC117009320
location: 198747..199031
location: region:198747-199031:1
so has part: feature:198747-199031:1:exon

position:198747:1
position: 198747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198747-199031:1:exon

IKBKG
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: IKBKG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(201988..218837)
location: region:201988-218837:-1
so has part: feature:201988-218837:-1:exon
subclass of: SO_0000010

117009318
type: Gene
SIO_000068: ncbigene

position:201988:-1
position: 201988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218837:-1
position: 218837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201988-218837:-1:exon

IKBKG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: IKBKG
product: inhibitor of nuclear factor kappa B kinase regulatory subunit gamma, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033083558.1
SIO_010081: IKBKG
subclass of: SO_0000673
so part of: IKBKG
location: complement(join(201988..202148,202251..202315,204009..204133,206077..206205,208676..208772,211230..211370,213748..213854,215879..215981,216653..216697,217454..217554,217994..218370,218590..218837))
location: region:201988-218837:-1
so has part: feature:218590-218837:-1:exon
so has part: feature:217994-218370:-1:exon
so has part: feature:217454-217554:-1:exon
so has part: feature:216653-216697:-1:exon
so has part: feature:215879-215981:-1:exon
so has part: feature:213748-213854:-1:exon
so has part: feature:211230-211370:-1:exon
so has part: feature:208676-208772:-1:exon
so has part: feature:206077-206205:-1:exon
so has part: feature:204009-204133:-1:exon
so has part: feature:202251-202315:-1:exon
so has part: feature:201988-202148:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:218590-218837:-1:exon

position:218590:-1
position: 218590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:217994-218370:-1:exon

position:217994:-1
position: 217994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218370:-1
position: 218370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:217454-217554:-1:exon

position:217454:-1
position: 217454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217554:-1
position: 217554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:216653-216697:-1:exon

position:216653:-1
position: 216653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216697:-1
position: 216697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:215879-215981:-1:exon

position:215879:-1
position: 215879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215981:-1
position: 215981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:213748-213854:-1:exon

position:213748:-1
position: 213748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213854:-1
position: 213854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:211230-211370:-1:exon

position:211230:-1
position: 211230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211370:-1
position: 211370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:208676-208772:-1:exon

position:208676:-1
position: 208676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208772:-1
position: 208772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:206077-206205:-1:exon

position:206077:-1
position: 206077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206205:-1
position: 206205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:204009-204133:-1:exon

position:204009:-1
position: 204009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204133:-1
position: 204133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:202251-202315:-1:exon

position:202251:-1
position: 202251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202315:-1
position: 202315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:201988-202148:-1:exon

position:202148:-1
position: 202148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IKBKG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: IKBKG
product: inhibitor of nuclear factor kappa B kinase regulatory subunit gamma, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033083557.1
SIO_010081: IKBKG
subclass of: SO_0000673
so part of: IKBKG
location: complement(join(201988..202148,202251..202315,204009..204133,206077..206205,208676..208772,211230..211370,213748..213857,215879..215981,216653..216697,217454..217554,217994..218370,218590..218837))
location: region:201988-218837:-1
so has part: feature:218590-218837:-1:exon
so has part: feature:217994-218370:-1:exon
so has part: feature:217454-217554:-1:exon
so has part: feature:216653-216697:-1:exon
so has part: feature:215879-215981:-1:exon
so has part: feature:213748-213857:-1:exon
so has part: feature:211230-211370:-1:exon
so has part: feature:208676-208772:-1:exon
so has part: feature:206077-206205:-1:exon
so has part: feature:204009-204133:-1:exon
so has part: feature:202251-202315:-1:exon
so has part: feature:201988-202148:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:218590-218837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:217994-218370:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217454-217554:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:216653-216697:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215879-215981:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:213748-213857:-1:exon

position:213857:-1
position: 213857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:211230-211370:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:208676-208772:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:206077-206205:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:204009-204133:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:202251-202315:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:201988-202148:-1:exon

IKBKG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: IKBKG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NF-kappa-B essential modulator isoform X2
translation: MSGGRWRRSAEMVQPGPEAEPALAEALQRLRAENRELRGALCHCTESLRQRLEELRKLQLQRRGERELLRGRWGQARDLVLHLRGQRGDSAGDTPEDSADTPGDSTDSPGDGRDTLKDAKDTPGDIKDTPGDTKDTPGDIRDSLRDTLKDNGDISRDTPDTSTKPLEVPPRSVSPPLEDVPAVPEPPQAPPGAPPEPSSEEQLRQRLAEAEAELVTLRARVAVAELRAQDVSRAAELQLQGLRRQLEDKAQVQAQVTSLLGELRESQNRLERSRAEREHLERRARSDAERCQQLEEVTQGHQVQLDQLRLQVTNLETALRVERRGATEEKRKLVQLQAAYHHLFQEYDAHIKASLEGDKRSQVTQEQLRAAEAALALKQDLIDRLKAEAERQRAALETIPVLQAQADIYRADFEAERAAREQLHGQREALQEELKQLRLRLGGDGARARLEELRNRHSEPPPAPAPAGGFGGVPPPPEEGPDLCCPKCQYKAPDMDTLQIHVMDCIK
SIO_010081: IKBKG
subclass of: SO_0000673
so part of: IKBKG
location: complement(join(202030..202148,202251..202315,204009..204133,206077..206205,208676..208772,211230..211370,213748..213854,215879..215981,216653..216697,217454..217554,217994..218370,218590..218704))
location: region:202030-218704:-1
so has part: feature:218590-218704:-1:exon
so has part: feature:217994-218370:-1:exon
so has part: feature:217454-217554:-1:exon
so has part: feature:216653-216697:-1:exon
so has part: feature:215879-215981:-1:exon
so has part: feature:213748-213854:-1:exon
so has part: feature:211230-211370:-1:exon
so has part: feature:208676-208772:-1:exon
so has part: feature:206077-206205:-1:exon
so has part: feature:204009-204133:-1:exon
so has part: feature:202251-202315:-1:exon
so has part: feature:202030-202148:-1:exon

XP_032939449.1
type: Protein
SIO_000068: ncbiprotein

position:202030:-1
position: 202030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218704:-1
position: 218704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218590-218704:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:217994-218370:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217454-217554:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:216653-216697:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215879-215981:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:213748-213854:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:211230-211370:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:208676-208772:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:206077-206205:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:204009-204133:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:202251-202315:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:202030-202148:-1:exon

IKBKG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: IKBKG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NF-kappa-B essential modulator isoform X1
translation: MSGGRWRRSAEMVQPGPEAEPALAEALQRLRAENRELRGALCHCTESLRQRLEELRKLQLQRRGERELLRGRWGQARDLVLHLRGQRGDSAGDTPEDSADTPGDSTDSPGDGRDTLKDAKDTPGDIKDTPGDTKDTPGDIRDSLRDTLKDNGDISRDTPDTSTKPLEVPPRSVSPPLEDVPAVPEPPQAPPGAPPEPSSEEQLRQRLAEAEAELVTLRARVAVAELRAQDVSRAAELQLQGLRRQLEQDKAQVQAQVTSLLGELRESQNRLERSRAEREHLERRARSDAERCQQLEEVTQGHQVQLDQLRLQVTNLETALRVERRGATEEKRKLVQLQAAYHHLFQEYDAHIKASLEGDKRSQVTQEQLRAAEAALALKQDLIDRLKAEAERQRAALETIPVLQAQADIYRADFEAERAAREQLHGQREALQEELKQLRLRLGGDGARARLEELRNRHSEPPPAPAPAGGFGGVPPPPEEGPDLCCPKCQYKAPDMDTLQIHVMDCIK
SIO_010081: IKBKG
subclass of: SO_0000673
so part of: IKBKG
location: complement(join(202030..202148,202251..202315,204009..204133,206077..206205,208676..208772,211230..211370,213748..213857,215879..215981,216653..216697,217454..217554,217994..218370,218590..218704))
location: region:202030-218704:-1
so has part: feature:218590-218704:-1:exon
so has part: feature:217994-218370:-1:exon
so has part: feature:217454-217554:-1:exon
so has part: feature:216653-216697:-1:exon
so has part: feature:215879-215981:-1:exon
so has part: feature:213748-213857:-1:exon
so has part: feature:211230-211370:-1:exon
so has part: feature:208676-208772:-1:exon
so has part: feature:206077-206205:-1:exon
so has part: feature:204009-204133:-1:exon
so has part: feature:202251-202315:-1:exon
so has part: feature:202030-202148:-1:exon

XP_032939448.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:218590-218704:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:217994-218370:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217454-217554:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:216653-216697:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215879-215981:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:213748-213857:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:211230-211370:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:208676-208772:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:206077-206205:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:204009-204133:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:202251-202315:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:202030-202148:-1:exon

G6PD
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: G6PD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 219044..249467
location: region:219044-249467:1
so has part: feature:219044-249467:1:exon
subclass of: SO_0000010

117009314
type: Gene
SIO_000068: ncbigene

position:219044:1
position: 219044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249467:1
position: 249467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219044-249467:1:exon

G6PD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: G6PD
product: glucose-6-phosphate dehydrogenase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033083549.2
SIO_010081: G6PD
subclass of: SO_0000673
so part of: G6PD
location: join(219044..219107,221996..222144,224061..224098,229174..229282,230077..230116,230639..230816,232677..232832,234974..235099,235189..235282,236446..236632,242241..242476,243717..243793,247030..247122,249172..249467)
location: region:219044-249467:1
so has part: feature:219044-219107:1:exon
so has part: feature:221996-222144:1:exon
so has part: feature:224061-224098:1:exon
so has part: feature:229174-229282:1:exon
so has part: feature:230077-230116:1:exon
so has part: feature:230639-230816:1:exon
so has part: feature:232677-232832:1:exon
so has part: feature:234974-235099:1:exon
so has part: feature:235189-235282:1:exon
so has part: feature:236446-236632:1:exon
so has part: feature:242241-242476:1:exon
so has part: feature:243717-243793:1:exon
so has part: feature:247030-247122:1:exon
so has part: feature:249172-249467:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219044-219107:1:exon

position:219107:1
position: 219107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:221996-222144:1:exon

position:221996:1
position: 221996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222144:1
position: 222144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:224061-224098:1:exon

position:224061:1
position: 224061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224098:1
position: 224098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:229174-229282:1:exon

position:229174:1
position: 229174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229282:1
position: 229282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:230077-230116:1:exon

position:230077:1
position: 230077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230116:1
position: 230116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:230639-230816:1:exon

position:230639:1
position: 230639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230816:1
position: 230816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:232677-232832:1:exon

position:232677:1
position: 232677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232832:1
position: 232832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:234974-235099:1:exon

position:234974:1
position: 234974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235099:1
position: 235099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:235189-235282:1:exon

position:235189:1
position: 235189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235282:1
position: 235282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:236446-236632:1:exon

position:236446:1
position: 236446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236632:1
position: 236632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:242241-242476:1:exon

position:242241:1
position: 242241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242476:1
position: 242476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:243717-243793:1:exon

position:243717:1
position: 243717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243793:1
position: 243793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:247030-247122:1:exon

position:247030:1
position: 247030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247122:1
position: 247122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:249172-249467:1:exon

position:249172:1
position: 249172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

G6PD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: G6PD
product: glucose-6-phosphate dehydrogenase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_042780097.1
SIO_010081: G6PD
subclass of: SO_0000673
so part of: G6PD
location: join(219044..219107,221996..222144,224061..224098,229174..229282,230480..230519,230639..230816,232677..232832,234974..235099,235189..235282,236446..236632,242241..242476,243717..243793,247030..247122,249172..249466)
location: region:219044-249466:1
so has part: feature:219044-219107:1:exon
so has part: feature:221996-222144:1:exon
so has part: feature:224061-224098:1:exon
so has part: feature:229174-229282:1:exon
so has part: feature:230480-230519:1:exon
so has part: feature:230639-230816:1:exon
so has part: feature:232677-232832:1:exon
so has part: feature:234974-235099:1:exon
so has part: feature:235189-235282:1:exon
so has part: feature:236446-236632:1:exon
so has part: feature:242241-242476:1:exon
so has part: feature:243717-243793:1:exon
so has part: feature:247030-247122:1:exon
so has part: feature:249172-249466:1:exon

position:249466:1
position: 249466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219044-219107:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:221996-222144:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:224061-224098:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:229174-229282:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:230480-230519:1:exon

position:230480:1
position: 230480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230519:1
position: 230519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:230639-230816:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:232677-232832:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:234974-235099:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:235189-235282:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:236446-236632:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:242241-242476:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:243717-243793:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:247030-247122:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:249172-249466:1:exon

G6PD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: G6PD
product: glucose-6-phosphate dehydrogenase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033083548.1
SIO_010081: G6PD
subclass of: SO_0000673
so part of: G6PD
location: join(219044..219107,221996..222144,224061..224098,229174..229282,230480..230499,230619..230816,232677..232832,234974..235099,235189..235282,236446..236632,242241..242476,243717..243793,247030..247122,249172..249466)
location: region:219044-249466:1
so has part: feature:219044-219107:1:exon
so has part: feature:221996-222144:1:exon
so has part: feature:224061-224098:1:exon
so has part: feature:229174-229282:1:exon
so has part: feature:230480-230499:1:exon
so has part: feature:230619-230816:1:exon
so has part: feature:232677-232832:1:exon
so has part: feature:234974-235099:1:exon
so has part: feature:235189-235282:1:exon
so has part: feature:236446-236632:1:exon
so has part: feature:242241-242476:1:exon
so has part: feature:243717-243793:1:exon
so has part: feature:247030-247122:1:exon
so has part: feature:249172-249466:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219044-219107:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:221996-222144:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:224061-224098:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:229174-229282:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:230480-230499:1:exon

position:230499:1
position: 230499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:230619-230816:1:exon

position:230619:1
position: 230619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:232677-232832:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:234974-235099:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:235189-235282:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:236446-236632:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:242241-242476:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:243717-243793:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:247030-247122:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:249172-249466:1:exon

G6PD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: G6PD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphate 1-dehydrogenase isoform X3
translation: MGTRASVGEAARERPGREGAMPGPGEEEPAPRGELSRSQVCGMLRQELCRDGAFLQGHPLVLVILGASGDLAKKKIYPTIWWLFRDGLLPDATHVVGFARSPLTVELIKEQTLPHLKVTPEDGPRLAEFLSLQSFVRGQYGDEASFRALDSHLRGLPGGARADRLFYLALPPSVYAPVTQHLRAVCMGTGWNRVIVEKPFGRDLGSSEELSAHLSSLFSEEQIYRMDHYLGKEMVQSLMVLRFGNRIFGPIWNRDNIACVVLTFKEPFGTEGRGGYFDDFGIIRDVMQNHLLQLLCLVAMEKPASTNPDDVRDEKVKVLKCISPVELKDVVLGQYVGNPEGPPEAQKGYLDDPTVPAGSTTPTFATAVLHVANERWDGVPFVLRCGKALNERKAEVRLQFREVPGDIFARQCKRNELVVRVQPREAVYAKLNTKKPGMYLRPEESELDLTYGSRYKDVKLPDAYERLLLDVICGNQMHFVRSDELREAWRIFTPLLHQIEQRRERPLPYPYGSRGPPEADELLRRAGFLYEGTYRWVPPEGPDPRP
SIO_010081: G6PD
subclass of: SO_0000673
so part of: G6PD
location: join(219053..219107,221996..222144,224061..224098,229174..229282,230077..230116,230639..230816,232677..232832,234974..235099,235189..235282,236446..236632,242241..242476,243717..243793,247030..247122,249172..249274)
location: region:219053-249274:1
so has part: feature:219053-219107:1:exon
so has part: feature:221996-222144:1:exon
so has part: feature:224061-224098:1:exon
so has part: feature:229174-229282:1:exon
so has part: feature:230077-230116:1:exon
so has part: feature:230639-230816:1:exon
so has part: feature:232677-232832:1:exon
so has part: feature:234974-235099:1:exon
so has part: feature:235189-235282:1:exon
so has part: feature:236446-236632:1:exon
so has part: feature:242241-242476:1:exon
so has part: feature:243717-243793:1:exon
so has part: feature:247030-247122:1:exon
so has part: feature:249172-249274:1:exon

XP_032939440.1
type: Protein
SIO_000068: ncbiprotein

position:219053:1
position: 219053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249274:1
position: 249274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219053-219107:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:221996-222144:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:224061-224098:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:229174-229282:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:230077-230116:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:230639-230816:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:232677-232832:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:234974-235099:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:235189-235282:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:236446-236632:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:242241-242476:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:243717-243793:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:247030-247122:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:249172-249274:1:exon

G6PD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: G6PD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphate 1-dehydrogenase isoform X2
translation: MGTRASVGEAARERPGREGAMPGPGEEEPAPRGELSRSQVCGMLRQELCRDGAFLQGHPLVLVILGASGDLAKKKIYPTIWWLFRDGLLPDATHVVGFARSPLTVELIKEQTLPHLKVTPEDGPRLAEFLSLQSFVRGQYGDEASFRALDSHLRGLPGGARADRLFYLALPPSVYAPVTQHLRAVCMGTGWNRVIVEKPFGRDLGSSEELSAHLSSLFSEEQIYRMDHYLGKEMVQSLMVLRFGNRIFGPIWNRDNIACVVLTFKEPFGTEGRGGYFDDFGIIRDVMQNHLLQLLCLVAMEKPASTNPDDVRDEKVKVLKCISPVELKDVVLGQYVGNPEGPPEAQKGYLDDPTVPAGSTTPTFATAVLHVANERWDGVPFVLRCGKALNERKAEVRLQFREVPGDIFARQCKRNELVVRVQPREAVYAKLNTKKPGMYLRPEESELDLTYGSRYKDVKLPDAYERLLLDVICGNQMHFVRSDELREAWRIFTPLLHQIEQRRERPLPYPYGSRGPPEADELLRRAGFLYEGTYRWVPPEGPDPRP
SIO_010081: G6PD
subclass of: SO_0000673
so part of: G6PD
location: join(219053..219107,221996..222144,224061..224098,229174..229282,230480..230519,230639..230816,232677..232832,234974..235099,235189..235282,236446..236632,242241..242476,243717..243793,247030..247122,249172..249274)
location: region:219053-249274:1
so has part: feature:219053-219107:1:exon
so has part: feature:221996-222144:1:exon
so has part: feature:224061-224098:1:exon
so has part: feature:229174-229282:1:exon
so has part: feature:230480-230519:1:exon
so has part: feature:230639-230816:1:exon
so has part: feature:232677-232832:1:exon
so has part: feature:234974-235099:1:exon
so has part: feature:235189-235282:1:exon
so has part: feature:236446-236632:1:exon
so has part: feature:242241-242476:1:exon
so has part: feature:243717-243793:1:exon
so has part: feature:247030-247122:1:exon
so has part: feature:249172-249274:1:exon

XP_042636031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:219053-219107:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:221996-222144:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:224061-224098:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:229174-229282:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:230480-230519:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:230639-230816:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:232677-232832:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:234974-235099:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:235189-235282:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:236446-236632:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:242241-242476:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:243717-243793:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:247030-247122:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:249172-249274:1:exon

G6PD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: G6PD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphate 1-dehydrogenase isoform X1
translation: MGTRASVGEAARERPGREGAMPGPGEEEPAPRGELSRSQVCGMLRQELCRDGAFLQGHPLVLVILGASGDLAKKKIYPTIWWLFRDGLLPDATHVVGFARSPLTVELIKEQTLPHLKVTPEDGPRLAEFLALQSFVRGQYGDEASFRALDSHLRGLPGGARADRLFYLALPPSVYAPVTQHLRAVCMGTGWNRVIVEKPFGRDLGSSEELSAHLSSLFSEEQIYRMDHYLGKEMVQSLMVLRFGNRIFGPIWNRDNIACVVLTFKEPFGTEGRGGYFDDFGIIRDVMQNHLLQLLCLVAMEKPASTNPDDVRDEKVKVLKCISPVELKDVVLGQYVGNPEGPPEAQKGYLDDPTVPAGSTTPTFATAVLHVANERWDGVPFVLRCGKALNERKAEVRLQFREVPGDIFARQCKRNELVVRVQPREAVYAKLNTKKPGMYLRPEESELDLTYGSRYKDVKLPDAYERLLLDVICGNQMHFVRSDELREAWRIFTPLLHQIEQRRERPLPYPYGSRGPPEADELLRRAGFLYEGTYRWVPPEGPDPRP
SIO_010081: G6PD
subclass of: SO_0000673
so part of: G6PD
location: join(219053..219107,221996..222144,224061..224098,229174..229282,230480..230499,230619..230816,232677..232832,234974..235099,235189..235282,236446..236632,242241..242476,243717..243793,247030..247122,249172..249274)
location: region:219053-249274:1
so has part: feature:219053-219107:1:exon
so has part: feature:221996-222144:1:exon
so has part: feature:224061-224098:1:exon
so has part: feature:229174-229282:1:exon
so has part: feature:230480-230499:1:exon
so has part: feature:230619-230816:1:exon
so has part: feature:232677-232832:1:exon
so has part: feature:234974-235099:1:exon
so has part: feature:235189-235282:1:exon
so has part: feature:236446-236632:1:exon
so has part: feature:242241-242476:1:exon
so has part: feature:243717-243793:1:exon
so has part: feature:247030-247122:1:exon
so has part: feature:249172-249274:1:exon

XP_032939439.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:219053-219107:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:221996-222144:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:224061-224098:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:229174-229282:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:230480-230499:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:230619-230816:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:232677-232832:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:234974-235099:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:235189-235282:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:236446-236632:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:242241-242476:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:243717-243793:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:247030-247122:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:249172-249274:1:exon

SPATA16
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: SPATA16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 249179..292568
location: region:249179-292568:1
so has part: feature:249179-292568:1:exon
subclass of: SO_0000010

117009313
type: Gene
SIO_000068: ncbigene

position:249179:1
position: 249179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292568:1
position: 292568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249179-292568:1:exon

SPATA16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SPATA16
product: spermatogenesis associated 16, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_042780092.1
SIO_010081: SPATA16
subclass of: SO_0000673
so part of: SPATA16
location: join(249179..249237,265025..265105,266696..267331,269740..269885,273015..273104,277237..277321,280181..280328,281172..281312,281747..281859,284322..284486,286809..286886,292228..292568)
location: region:249179-292568:1
so has part: feature:249179-249237:1:exon
so has part: feature:265025-265105:1:exon
so has part: feature:266696-267331:1:exon
so has part: feature:269740-269885:1:exon
so has part: feature:273015-273104:1:exon
so has part: feature:277237-277321:1:exon
so has part: feature:280181-280328:1:exon
so has part: feature:281172-281312:1:exon
so has part: feature:281747-281859:1:exon
so has part: feature:284322-284486:1:exon
so has part: feature:286809-286886:1:exon
so has part: feature:292228-292568:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:249179-249237:1:exon

position:249237:1
position: 249237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:265025-265105:1:exon

position:265025:1
position: 265025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265105:1
position: 265105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:266696-267331:1:exon

position:266696:1
position: 266696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267331:1
position: 267331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:269740-269885:1:exon

position:269740:1
position: 269740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269885:1
position: 269885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:273015-273104:1:exon

position:273015:1
position: 273015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273104:1
position: 273104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:277237-277321:1:exon

position:277237:1
position: 277237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277321:1
position: 277321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:280181-280328:1:exon

position:280181:1
position: 280181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280328:1
position: 280328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:281172-281312:1:exon

position:281172:1
position: 281172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281312:1
position: 281312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:281747-281859:1:exon

position:281747:1
position: 281747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281859:1
position: 281859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:284322-284486:1:exon

position:284322:1
position: 284322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284486:1
position: 284486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:286809-286886:1:exon

position:286809:1
position: 286809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286886:1
position: 286886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:292228-292568:1:exon

position:292228:1
position: 292228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPATA16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SPATA16
product: spermatogenesis associated 16, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033083547.1
SIO_010081: SPATA16
subclass of: SO_0000673
so part of: SPATA16
location: join(264205..264230,265025..265105,266696..267331,269740..269885,273015..273104,277237..277321,280181..280328,281172..281312,281747..281859,284322..284486,286809..286886,292228..292568)
location: region:264205-292568:1
so has part: feature:264205-264230:1:exon
so has part: feature:265025-265105:1:exon
so has part: feature:266696-267331:1:exon
so has part: feature:269740-269885:1:exon
so has part: feature:273015-273104:1:exon
so has part: feature:277237-277321:1:exon
so has part: feature:280181-280328:1:exon
so has part: feature:281172-281312:1:exon
so has part: feature:281747-281859:1:exon
so has part: feature:284322-284486:1:exon
so has part: feature:286809-286886:1:exon
so has part: feature:292228-292568:1:exon

position:264205:1
position: 264205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264205-264230:1:exon

position:264230:1
position: 264230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:265025-265105:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:266696-267331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269740-269885:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:273015-273104:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:277237-277321:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280181-280328:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:281172-281312:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:281747-281859:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:284322-284486:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:286809-286886:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:292228-292568:1:exon

SPATA16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SPATA16
product: spermatogenesis associated 16, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_042780095.1
SIO_010081: SPATA16
subclass of: SO_0000673
so part of: SPATA16
location: join(264326..264337,265025..265105,266696..267331,269740..269885,273015..273104,277237..277321,280181..280328,281172..281312,281747..281859,284322..284486,286809..286886,292228..292568)
location: region:264326-292568:1
so has part: feature:264326-264337:1:exon
so has part: feature:265025-265105:1:exon
so has part: feature:266696-267331:1:exon
so has part: feature:269740-269885:1:exon
so has part: feature:273015-273104:1:exon
so has part: feature:277237-277321:1:exon
so has part: feature:280181-280328:1:exon
so has part: feature:281172-281312:1:exon
so has part: feature:281747-281859:1:exon
so has part: feature:284322-284486:1:exon
so has part: feature:286809-286886:1:exon
so has part: feature:292228-292568:1:exon

position:264326:1
position: 264326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264326-264337:1:exon

position:264337:1
position: 264337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:265025-265105:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:266696-267331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269740-269885:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:273015-273104:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:277237-277321:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280181-280328:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:281172-281312:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:281747-281859:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:284322-284486:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:286809-286886:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:292228-292568:1:exon

SPATA16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SPATA16
product: spermatogenesis associated 16, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_042780093.1
SIO_010081: SPATA16
subclass of: SO_0000673
so part of: SPATA16
location: join(264450..264559,265025..265105,266696..267331,269740..269885,273015..273104,277237..277321,280181..280328,281172..281312,281747..281859,284322..284486,286809..286886,292228..292568)
location: region:264450-292568:1
so has part: feature:264450-264559:1:exon
so has part: feature:265025-265105:1:exon
so has part: feature:266696-267331:1:exon
so has part: feature:269740-269885:1:exon
so has part: feature:273015-273104:1:exon
so has part: feature:277237-277321:1:exon
so has part: feature:280181-280328:1:exon
so has part: feature:281172-281312:1:exon
so has part: feature:281747-281859:1:exon
so has part: feature:284322-284486:1:exon
so has part: feature:286809-286886:1:exon
so has part: feature:292228-292568:1:exon

position:264450:1
position: 264450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264450-264559:1:exon

position:264559:1
position: 264559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:265025-265105:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:266696-267331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269740-269885:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:273015-273104:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:277237-277321:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280181-280328:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:281172-281312:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:281747-281859:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:284322-284486:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:286809-286886:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:292228-292568:1:exon

SPATA16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SPATA16
product: spermatogenesis associated 16, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_042780096.1
SIO_010081: SPATA16
subclass of: SO_0000673
so part of: SPATA16
location: join(264722..264726,265025..265105,266696..267331,269740..269885,273015..273104,277237..277321,280181..280328,281172..281312,281747..281859,284322..284486,286809..286886,292228..292568)
location: region:264722-292568:1
so has part: feature:264722-264726:1:exon
so has part: feature:265025-265105:1:exon
so has part: feature:266696-267331:1:exon
so has part: feature:269740-269885:1:exon
so has part: feature:273015-273104:1:exon
so has part: feature:277237-277321:1:exon
so has part: feature:280181-280328:1:exon
so has part: feature:281172-281312:1:exon
so has part: feature:281747-281859:1:exon
so has part: feature:284322-284486:1:exon
so has part: feature:286809-286886:1:exon
so has part: feature:292228-292568:1:exon

position:264722:1
position: 264722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264722-264726:1:exon

position:264726:1
position: 264726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:265025-265105:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:266696-267331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269740-269885:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:273015-273104:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:277237-277321:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280181-280328:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:281172-281312:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:281747-281859:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:284322-284486:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:286809-286886:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:292228-292568:1:exon

SPATA16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SPATA16
product: spermatogenesis associated 16, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_042780094.1
SIO_010081: SPATA16
subclass of: SO_0000673
so part of: SPATA16
location: join(264902..264987,265025..265105,266696..267331,269740..269885,273015..273104,277237..277321,280181..280328,281172..281312,281747..281859,284322..284486,286809..286886,292228..292568)
location: region:264902-292568:1
so has part: feature:264902-264987:1:exon
so has part: feature:265025-265105:1:exon
so has part: feature:266696-267331:1:exon
so has part: feature:269740-269885:1:exon
so has part: feature:273015-273104:1:exon
so has part: feature:277237-277321:1:exon
so has part: feature:280181-280328:1:exon
so has part: feature:281172-281312:1:exon
so has part: feature:281747-281859:1:exon
so has part: feature:284322-284486:1:exon
so has part: feature:286809-286886:1:exon
so has part: feature:292228-292568:1:exon

position:264902:1
position: 264902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264902-264987:1:exon

position:264987:1
position: 264987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:265025-265105:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:266696-267331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269740-269885:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:273015-273104:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:277237-277321:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:280181-280328:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:281172-281312:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:281747-281859:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:284322-284486:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:286809-286886:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:292228-292568:1:exon

SPATA16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SPATA16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated protein 16
translation: MFPQQEPSSGAPEEPKQPQERPESDPTKSGSPGDASRIKSDPESGRTESGSPGDASRTKSTPERCRTESGSPGDESRTKSEPQRCRTESGSPGDASRIKSDPESDPTKSGSPGDASRTKSTPDCCSGPFPSAALPIAPSRLRDIEERLLCADQADAELESGEPGPPTGPPAGPAGPPAAAQPPEPGDSRWLGAGAALRAALREGSARCRQRDFAAAAAKFSVALELCNKGFATEDPLKSSPAEISRLASWIESKLVICYLRLGQPGLALLHSHRSIIENPSHFCNHLRQAACFRCLHRYSEAARSAMVAQCLYVLAEGAGLDTSDLLQLYWQAMTQEALSAEMSFCALYTPFEKEDKADKIKEANKTFAERHPEYVQHIFTDPHGIHVLPEKAESHPGQQYLLTLGFRNREIGKTLEKLVTQKMPIFPGQKITWSSSVEEEAETFWQNNGKMIMAALAFIGSTKIKDERGPCARAMEHLHHASLLGQLHRGEEQAQVLRQGMAELATVPHLQRVSQEEDKLLQSLMADAVDILAGRTGERAWAKIHKVALIEEYLREAEEFYFRPPRAPAPGAENISWTPKGRRYLRLENSNVFIPNPRSLATGLKKRRILFAKS
SIO_010081: SPATA16
subclass of: SO_0000673
so part of: SPATA16
location: join(265067..265105,266696..267331,269740..269885,273015..273104,277237..277321,280181..280328,281172..281312,281747..281859,284322..284486,286809..286886,292228..292434)
location: region:265067-292434:1
so has part: feature:265067-265105:1:exon
so has part: feature:266696-267331:1:exon
so has part: feature:269740-269885:1:exon
so has part: feature:273015-273104:1:exon
so has part: feature:277237-277321:1:exon
so has part: feature:280181-280328:1:exon
so has part: feature:281172-281312:1:exon
so has part: feature:281747-281859:1:exon
so has part: feature:284322-284486:1:exon
so has part: feature:286809-286886:1:exon
so has part: feature:292228-292434:1:exon

XP_032939438.1
type: Protein
SIO_000068: ncbiprotein

position:265067:1
position: 265067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292434:1
position: 292434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265067-265105:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:266696-267331:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:269740-269885:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:273015-273104:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277237-277321:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280181-280328:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281172-281312:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:281747-281859:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:284322-284486:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:286809-286886:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:292228-292434:1:exon

SPATA16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SPATA16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated protein 16
translation: MFPQQEPSSGAPEEPKQPQERPESDPTKSGSPGDASRIKSDPESGRTESGSPGDASRTKSTPERCRTESGSPGDESRTKSEPQRCRTESGSPGDASRIKSDPESDPTKSGSPGDASRTKSTPDCCSGPFPSAALPIAPSRLRDIEERLLCADQADAELESGEPGPPTGPPAGPAGPPAAAQPPEPGDSRWLGAGAALRAALREGSARCRQRDFAAAAAKFSVALELCNKGFATEDPLKSSPAEISRLASWIESKLVICYLRLGQPGLALLHSHRSIIENPSHFCNHLRQAACFRCLHRYSEAARSAMVAQCLYVLAEGAGLDTSDLLQLYWQAMTQEALSAEMSFCALYTPFEKEDKADKIKEANKTFAERHPEYVQHIFTDPHGIHVLPEKAESHPGQQYLLTLGFRNREIGKTLEKLVTQKMPIFPGQKITWSSSVEEEAETFWQNNGKMIMAALAFIGSTKIKDERGPCARAMEHLHHASLLGQLHRGEEQAQVLRQGMAELATVPHLQRVSQEEDKLLQSLMADAVDILAGRTGERAWAKIHKVALIEEYLREAEEFYFRPPRAPAPGAENISWTPKGRRYLRLENSNVFIPNPRSLATGLKKRRILFAKS
SIO_010081: SPATA16
subclass of: SO_0000673
so part of: SPATA16
location: join(265067..265105,266696..267331,269740..269885,273015..273104,277237..277321,280181..280328,281172..281312,281747..281859,284322..284486,286809..286886,292228..292434)
location: region:265067-292434:1
so has part: feature:265067-265105:1:exon
so has part: feature:266696-267331:1:exon
so has part: feature:269740-269885:1:exon
so has part: feature:273015-273104:1:exon
so has part: feature:277237-277321:1:exon
so has part: feature:280181-280328:1:exon
so has part: feature:281172-281312:1:exon
so has part: feature:281747-281859:1:exon
so has part: feature:284322-284486:1:exon
so has part: feature:286809-286886:1:exon
so has part: feature:292228-292434:1:exon

XP_042636026.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:265067-265105:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:266696-267331:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:269740-269885:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:273015-273104:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277237-277321:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280181-280328:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281172-281312:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:281747-281859:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:284322-284486:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:286809-286886:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:292228-292434:1:exon

SPATA16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SPATA16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated protein 16
translation: MFPQQEPSSGAPEEPKQPQERPESDPTKSGSPGDASRIKSDPESGRTESGSPGDASRTKSTPERCRTESGSPGDESRTKSEPQRCRTESGSPGDASRIKSDPESDPTKSGSPGDASRTKSTPDCCSGPFPSAALPIAPSRLRDIEERLLCADQADAELESGEPGPPTGPPAGPAGPPAAAQPPEPGDSRWLGAGAALRAALREGSARCRQRDFAAAAAKFSVALELCNKGFATEDPLKSSPAEISRLASWIESKLVICYLRLGQPGLALLHSHRSIIENPSHFCNHLRQAACFRCLHRYSEAARSAMVAQCLYVLAEGAGLDTSDLLQLYWQAMTQEALSAEMSFCALYTPFEKEDKADKIKEANKTFAERHPEYVQHIFTDPHGIHVLPEKAESHPGQQYLLTLGFRNREIGKTLEKLVTQKMPIFPGQKITWSSSVEEEAETFWQNNGKMIMAALAFIGSTKIKDERGPCARAMEHLHHASLLGQLHRGEEQAQVLRQGMAELATVPHLQRVSQEEDKLLQSLMADAVDILAGRTGERAWAKIHKVALIEEYLREAEEFYFRPPRAPAPGAENISWTPKGRRYLRLENSNVFIPNPRSLATGLKKRRILFAKS
SIO_010081: SPATA16
subclass of: SO_0000673
so part of: SPATA16
location: join(265067..265105,266696..267331,269740..269885,273015..273104,277237..277321,280181..280328,281172..281312,281747..281859,284322..284486,286809..286886,292228..292434)
location: region:265067-292434:1
so has part: feature:265067-265105:1:exon
so has part: feature:266696-267331:1:exon
so has part: feature:269740-269885:1:exon
so has part: feature:273015-273104:1:exon
so has part: feature:277237-277321:1:exon
so has part: feature:280181-280328:1:exon
so has part: feature:281172-281312:1:exon
so has part: feature:281747-281859:1:exon
so has part: feature:284322-284486:1:exon
so has part: feature:286809-286886:1:exon
so has part: feature:292228-292434:1:exon

XP_042636027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:265067-265105:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:266696-267331:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:269740-269885:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:273015-273104:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277237-277321:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280181-280328:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281172-281312:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:281747-281859:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:284322-284486:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:286809-286886:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:292228-292434:1:exon

SPATA16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SPATA16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated protein 16
translation: MFPQQEPSSGAPEEPKQPQERPESDPTKSGSPGDASRIKSDPESGRTESGSPGDASRTKSTPERCRTESGSPGDESRTKSEPQRCRTESGSPGDASRIKSDPESDPTKSGSPGDASRTKSTPDCCSGPFPSAALPIAPSRLRDIEERLLCADQADAELESGEPGPPTGPPAGPAGPPAAAQPPEPGDSRWLGAGAALRAALREGSARCRQRDFAAAAAKFSVALELCNKGFATEDPLKSSPAEISRLASWIESKLVICYLRLGQPGLALLHSHRSIIENPSHFCNHLRQAACFRCLHRYSEAARSAMVAQCLYVLAEGAGLDTSDLLQLYWQAMTQEALSAEMSFCALYTPFEKEDKADKIKEANKTFAERHPEYVQHIFTDPHGIHVLPEKAESHPGQQYLLTLGFRNREIGKTLEKLVTQKMPIFPGQKITWSSSVEEEAETFWQNNGKMIMAALAFIGSTKIKDERGPCARAMEHLHHASLLGQLHRGEEQAQVLRQGMAELATVPHLQRVSQEEDKLLQSLMADAVDILAGRTGERAWAKIHKVALIEEYLREAEEFYFRPPRAPAPGAENISWTPKGRRYLRLENSNVFIPNPRSLATGLKKRRILFAKS
SIO_010081: SPATA16
subclass of: SO_0000673
so part of: SPATA16
location: join(265067..265105,266696..267331,269740..269885,273015..273104,277237..277321,280181..280328,281172..281312,281747..281859,284322..284486,286809..286886,292228..292434)
location: region:265067-292434:1
so has part: feature:265067-265105:1:exon
so has part: feature:266696-267331:1:exon
so has part: feature:269740-269885:1:exon
so has part: feature:273015-273104:1:exon
so has part: feature:277237-277321:1:exon
so has part: feature:280181-280328:1:exon
so has part: feature:281172-281312:1:exon
so has part: feature:281747-281859:1:exon
so has part: feature:284322-284486:1:exon
so has part: feature:286809-286886:1:exon
so has part: feature:292228-292434:1:exon

XP_042636028.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:265067-265105:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:266696-267331:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:269740-269885:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:273015-273104:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277237-277321:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280181-280328:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281172-281312:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:281747-281859:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:284322-284486:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:286809-286886:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:292228-292434:1:exon

SPATA16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SPATA16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated protein 16
translation: MFPQQEPSSGAPEEPKQPQERPESDPTKSGSPGDASRIKSDPESGRTESGSPGDASRTKSTPERCRTESGSPGDESRTKSEPQRCRTESGSPGDASRIKSDPESDPTKSGSPGDASRTKSTPDCCSGPFPSAALPIAPSRLRDIEERLLCADQADAELESGEPGPPTGPPAGPAGPPAAAQPPEPGDSRWLGAGAALRAALREGSARCRQRDFAAAAAKFSVALELCNKGFATEDPLKSSPAEISRLASWIESKLVICYLRLGQPGLALLHSHRSIIENPSHFCNHLRQAACFRCLHRYSEAARSAMVAQCLYVLAEGAGLDTSDLLQLYWQAMTQEALSAEMSFCALYTPFEKEDKADKIKEANKTFAERHPEYVQHIFTDPHGIHVLPEKAESHPGQQYLLTLGFRNREIGKTLEKLVTQKMPIFPGQKITWSSSVEEEAETFWQNNGKMIMAALAFIGSTKIKDERGPCARAMEHLHHASLLGQLHRGEEQAQVLRQGMAELATVPHLQRVSQEEDKLLQSLMADAVDILAGRTGERAWAKIHKVALIEEYLREAEEFYFRPPRAPAPGAENISWTPKGRRYLRLENSNVFIPNPRSLATGLKKRRILFAKS
SIO_010081: SPATA16
subclass of: SO_0000673
so part of: SPATA16
location: join(265067..265105,266696..267331,269740..269885,273015..273104,277237..277321,280181..280328,281172..281312,281747..281859,284322..284486,286809..286886,292228..292434)
location: region:265067-292434:1
so has part: feature:265067-265105:1:exon
so has part: feature:266696-267331:1:exon
so has part: feature:269740-269885:1:exon
so has part: feature:273015-273104:1:exon
so has part: feature:277237-277321:1:exon
so has part: feature:280181-280328:1:exon
so has part: feature:281172-281312:1:exon
so has part: feature:281747-281859:1:exon
so has part: feature:284322-284486:1:exon
so has part: feature:286809-286886:1:exon
so has part: feature:292228-292434:1:exon

XP_042636029.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:265067-265105:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:266696-267331:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:269740-269885:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:273015-273104:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277237-277321:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280181-280328:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281172-281312:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:281747-281859:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:284322-284486:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:286809-286886:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:292228-292434:1:exon

SPATA16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SPATA16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated protein 16
translation: MFPQQEPSSGAPEEPKQPQERPESDPTKSGSPGDASRIKSDPESGRTESGSPGDASRTKSTPERCRTESGSPGDESRTKSEPQRCRTESGSPGDASRIKSDPESDPTKSGSPGDASRTKSTPDCCSGPFPSAALPIAPSRLRDIEERLLCADQADAELESGEPGPPTGPPAGPAGPPAAAQPPEPGDSRWLGAGAALRAALREGSARCRQRDFAAAAAKFSVALELCNKGFATEDPLKSSPAEISRLASWIESKLVICYLRLGQPGLALLHSHRSIIENPSHFCNHLRQAACFRCLHRYSEAARSAMVAQCLYVLAEGAGLDTSDLLQLYWQAMTQEALSAEMSFCALYTPFEKEDKADKIKEANKTFAERHPEYVQHIFTDPHGIHVLPEKAESHPGQQYLLTLGFRNREIGKTLEKLVTQKMPIFPGQKITWSSSVEEEAETFWQNNGKMIMAALAFIGSTKIKDERGPCARAMEHLHHASLLGQLHRGEEQAQVLRQGMAELATVPHLQRVSQEEDKLLQSLMADAVDILAGRTGERAWAKIHKVALIEEYLREAEEFYFRPPRAPAPGAENISWTPKGRRYLRLENSNVFIPNPRSLATGLKKRRILFAKS
SIO_010081: SPATA16
subclass of: SO_0000673
so part of: SPATA16
location: join(265067..265105,266696..267331,269740..269885,273015..273104,277237..277321,280181..280328,281172..281312,281747..281859,284322..284486,286809..286886,292228..292434)
location: region:265067-292434:1
so has part: feature:265067-265105:1:exon
so has part: feature:266696-267331:1:exon
so has part: feature:269740-269885:1:exon
so has part: feature:273015-273104:1:exon
so has part: feature:277237-277321:1:exon
so has part: feature:280181-280328:1:exon
so has part: feature:281172-281312:1:exon
so has part: feature:281747-281859:1:exon
so has part: feature:284322-284486:1:exon
so has part: feature:286809-286886:1:exon
so has part: feature:292228-292434:1:exon

XP_042636030.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:265067-265105:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:266696-267331:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:269740-269885:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:273015-273104:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277237-277321:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280181-280328:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:281172-281312:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:281747-281859:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:284322-284486:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:286809-286886:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:292228-292434:1:exon

LOC117009394
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009394
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 296469..298313
location: region:296469-298313:1
so has part: feature:296469-298313:1:exon
subclass of: SO_0000010

117009394
type: Gene
SIO_000068: ncbigene

position:296469:1
position: 296469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298313:1
position: 298313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296469-298313:1:exon

LOC117009394
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009394
product: gastrula zinc finger protein XlCGF9.1-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083639.1
SIO_010081: LOC117009394
subclass of: SO_0000673
so part of: LOC117009394
location: join(296469..297930,298171..298313)
location: region:296469-298313:1
so has part: feature:296469-297930:1:exon
so has part: feature:298171-298313:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296469-297930:1:exon

position:297930:1
position: 297930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:298171-298313:1:exon

position:298171:1
position: 298171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117009394
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009394
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastrula zinc finger protein XlCGF9.1-like
translation: MIHTGEKPYECPECGKGFRDSPGLIIHHRSHTGERPFECGECGLSFGRSSHLTSHLKIHSGERPYQCGQCGKSFQTSSLLLIHQRIHTDERPFRCPECTRGFRHSSHLARHRRIHSGERPFGCPECGKSFRTSSVLNQHQWRHRPGGSVAAAVGGSDSAAAL
SIO_010081: LOC117009394
subclass of: SO_0000673
so part of: LOC117009394
location: 296775..297263
location: region:296775-297263:1
so has part: feature:296775-297263:1:exon

XP_032939530.1
type: Protein
SIO_000068: ncbiprotein

position:296775:1
position: 296775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297263:1
position: 297263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296775-297263:1:exon

FAM50A
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: FAM50A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(304183..310501)
location: region:304183-310501:-1
so has part: feature:304183-310501:-1:exon
subclass of: SO_0000010

117009291
type: Gene
SIO_000068: ncbigene

position:304183:-1
position: 304183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310501:-1
position: 310501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304183-310501:-1:exon

FAM50A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: FAM50A
product: family with sequence similarity 50 member A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033083523.1
SIO_010081: FAM50A
subclass of: SO_0000673
so part of: FAM50A
location: complement(join(304183..304270,306703..306813,308976..309046,309204..309252,310401..310501))
location: region:304183-310501:-1
so has part: feature:310401-310501:-1:exon
so has part: feature:309204-309252:-1:exon
so has part: feature:308976-309046:-1:exon
so has part: feature:306703-306813:-1:exon
so has part: feature:304183-304270:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:310401-310501:-1:exon

position:310401:-1
position: 310401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:309204-309252:-1:exon

position:309204:-1
position: 309204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309252:-1
position: 309252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:308976-309046:-1:exon

position:308976:-1
position: 308976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309046:-1
position: 309046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:306703-306813:-1:exon

position:306703:-1
position: 306703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306813:-1
position: 306813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:304183-304270:-1:exon

position:304270:-1
position: 304270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FAM50A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: FAM50A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM50A
translation: MYIKEDLIIPHHHSFYDFIVTKARGKSGPLFNFDVHDDVRLLSDATVEKDESHAGKVVLRSWYEKNKHIFPASRWEPFDPEKRWDKYTIR
SIO_010081: FAM50A
subclass of: SO_0000673
so part of: FAM50A
location: complement(join(304262..304270,306703..306813,308976..309046,309204..309252,310401..310433))
location: region:304262-310433:-1
so has part: feature:310401-310433:-1:exon
so has part: feature:309204-309252:-1:exon
so has part: feature:308976-309046:-1:exon
so has part: feature:306703-306813:-1:exon
so has part: feature:304262-304270:-1:exon

XP_032939414.1
type: Protein
SIO_000068: ncbiprotein

position:304262:-1
position: 304262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310433:-1
position: 310433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310401-310433:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:309204-309252:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:308976-309046:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:306703-306813:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:304262-304270:-1:exon

ATP2B3
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: ATP2B3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(311590..325040)
location: region:311590-325040:-1
so has part: feature:311590-325040:-1:exon
subclass of: SO_0000010

117009214
type: Gene
SIO_000068: ncbigene

position:311590:-1
position: 311590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325040:-1
position: 325040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311590-325040:-1:exon

ATP2B3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ATP2B3
product: ATPase plasma membrane Ca2+ transporting 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033083455.2
SIO_010081: ATP2B3
subclass of: SO_0000673
so part of: ATP2B3
location: complement(join(311590..311603,311751..311760,311901..312143,317175..317389,319575..319742,319829..319870,320629..320754,320833..320958,321780..322037,323263..323460,324884..325040))
location: region:311590-325040:-1
so has part: feature:324884-325040:-1:exon
so has part: feature:323263-323460:-1:exon
so has part: feature:321780-322037:-1:exon
so has part: feature:320833-320958:-1:exon
so has part: feature:320629-320754:-1:exon
so has part: feature:319829-319870:-1:exon
so has part: feature:319575-319742:-1:exon
so has part: feature:317175-317389:-1:exon
so has part: feature:311901-312143:-1:exon
so has part: feature:311751-311760:-1:exon
so has part: feature:311590-311603:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:324884-325040:-1:exon

position:324884:-1
position: 324884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:323263-323460:-1:exon

position:323263:-1
position: 323263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323460:-1
position: 323460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:321780-322037:-1:exon

position:321780:-1
position: 321780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322037:-1
position: 322037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:320833-320958:-1:exon

position:320833:-1
position: 320833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320958:-1
position: 320958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:320629-320754:-1:exon

position:320629:-1
position: 320629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320754:-1
position: 320754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:319829-319870:-1:exon

position:319829:-1
position: 319829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319870:-1
position: 319870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:319575-319742:-1:exon

position:319575:-1
position: 319575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319742:-1
position: 319742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:317175-317389:-1:exon

position:317175:-1
position: 317175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317389:-1
position: 317389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:311901-312143:-1:exon

position:311901:-1
position: 311901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312143:-1
position: 312143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:311751-311760:-1:exon

position:311751:-1
position: 311751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311760:-1
position: 311760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:311590-311603:-1:exon

position:311603:-1
position: 311603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP2B3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ATP2B3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plasma membrane calcium-transporting ATPase 3
translation: MGDAGGGFGLALPELRALMELRGSEALLRLQQDLGGVPGLCRRLRTSPTDGLPEAPPELERRRRAFGRNWIPPRRPKSFAALVWEALQDVTLVILEVAALVSLGLSFYAPPSAADEACGQVSGGTEDEGEAEAGWIEGAAILLSVACVVLVTASNDWSKERQFRGLQSRLEREQRVAVLRGGHLAQVPVADLVVGDIVQVKYGDLLPADGVLIQGNDLKIDESALTGESDHVRKSLDKDPLLLSGTHVMEGSGRMVVTAVGVNSQSGIIFTLLGAAGDDEDDKDRKGKPQDGAVDAPQPKGKRPDGAVAMEMQPLKSAEGGDTADGPGTRPRGGPKKEKSVLQAKLTQLAVQIGKAGLAMSAVTVIILVLYFVIETFVVQGRPWLPECAPLYVQYWVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMAVVQAFVGGSHFGHPPAPAALAPATLQLLGQAIAINSAYTSKILQDTARYW
SIO_010081: ATP2B3
subclass of: SO_0000673
so part of: ATP2B3
location: complement(join(311590..311603,311751..311760,311901..312143,317175..317389,319575..319742,319829..319870,320629..320754,320833..320958,321780..322037,323263..323460,324884..325034))
location: region:311590-325034:-1
so has part: feature:324884-325034:-1:exon
so has part: feature:323263-323460:-1:exon
so has part: feature:321780-322037:-1:exon
so has part: feature:320833-320958:-1:exon
so has part: feature:320629-320754:-1:exon
so has part: feature:319829-319870:-1:exon
so has part: feature:319575-319742:-1:exon
so has part: feature:317175-317389:-1:exon
so has part: feature:311901-312143:-1:exon
so has part: feature:311751-311760:-1:exon
so has part: feature:311590-311603:-1:exon

XP_032939346.1
type: Protein
SIO_000068: ncbiprotein

position:325034:-1
position: 325034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324884-325034:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:323263-323460:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:321780-322037:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:320833-320958:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:320629-320754:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:319829-319870:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:319575-319742:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:317175-317389:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:311901-312143:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:311751-311760:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:311590-311603:-1:exon

LOC117009389
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009389
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(330212..342814)
location: region:330212-342814:-1
so has part: feature:330212-342814:-1:exon
subclass of: SO_0000010

117009389
type: Gene
SIO_000068: ncbigene

position:330212:-1
position: 330212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342814:-1
position: 342814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330212-342814:-1:exon

LOC117009389
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009389
product: red-sensitive opsin
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083631.1
SIO_010081: LOC117009389
subclass of: SO_0000673
so part of: LOC117009389
location: complement(join(330212..330370,333278..333517,335489..335654,337751..337919,340049..340345,342680..342814))
location: region:330212-342814:-1
so has part: feature:342680-342814:-1:exon
so has part: feature:340049-340345:-1:exon
so has part: feature:337751-337919:-1:exon
so has part: feature:335489-335654:-1:exon
so has part: feature:333278-333517:-1:exon
so has part: feature:330212-330370:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:342680-342814:-1:exon

position:342680:-1
position: 342680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:340049-340345:-1:exon

position:340049:-1
position: 340049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340345:-1
position: 340345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:337751-337919:-1:exon

position:337751:-1
position: 337751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337919:-1
position: 337919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:335489-335654:-1:exon

position:335489:-1
position: 335489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335654:-1
position: 335654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:333278-333517:-1:exon

position:333278:-1
position: 333278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333517:-1
position: 333517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:330212-330370:-1:exon

position:330370:-1
position: 330370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009389
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009389
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: red-sensitive opsin
translation: METGVWDGAVFAARRRHDDDDTTRDSVFTYTNSNNTRGPFEGPNYHIAPRWVYNLTSLWMIFVVVASVFTNGLVLVATAKFKKLRHPLNWILVNLAIADLGETVIASTISVVNQIFGYFILGHPMCVIEGYTVSACGITALWSLAIISWERWFVVCKPFGNIKFDGKLAMAGVLFSWIWACSWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSDPGVQSYMVVLMVTCCFFPLSIIIFCYLQVWMAIRAVAAQQKESESTQKAEKEVSRMVVVMILAYIFCWGPYTFFACFAAANPGYAFHPLTAALPAFFAKSATIYNPIIYVFMNRQFRNCILQLFGKKVDDGSEVSTSRTEVSSVSNSSVSPA
SIO_010081: LOC117009389
subclass of: SO_0000673
so part of: LOC117009389
location: complement(join(330257..330370,333278..333517,335489..335654,337751..337919,340049..340345,342680..342791))
location: region:330257-342791:-1
so has part: feature:342680-342791:-1:exon
so has part: feature:340049-340345:-1:exon
so has part: feature:337751-337919:-1:exon
so has part: feature:335489-335654:-1:exon
so has part: feature:333278-333517:-1:exon
so has part: feature:330257-330370:-1:exon

XP_032939522.1
type: Protein
SIO_000068: ncbiprotein

position:330257:-1
position: 330257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342791:-1
position: 342791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342680-342791:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:340049-340345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337751-337919:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:335489-335654:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:333278-333517:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:330257-330370:-1:exon

LOC117009391
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009391
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(348070..358990)
location: region:348070-358990:-1
so has part: feature:348070-358990:-1:exon
subclass of: SO_0000010

117009391
type: Gene
SIO_000068: ncbigene

position:348070:-1
position: 348070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358990:-1
position: 358990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348070-358990:-1:exon

LOC117009391
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009391
product: blue-sensitive opsin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 mRNAs, 129 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033083632.1
SIO_010081: LOC117009391
subclass of: SO_0000673
so part of: LOC117009391
location: complement(join(348070..348226,349883..350071,351339..351389,352608..352773,356451..356619,358596..358990))
location: region:348070-358990:-1
so has part: feature:358596-358990:-1:exon
so has part: feature:356451-356619:-1:exon
so has part: feature:352608-352773:-1:exon
so has part: feature:351339-351389:-1:exon
so has part: feature:349883-350071:-1:exon
so has part: feature:348070-348226:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:358596-358990:-1:exon

position:358596:-1
position: 358596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:356451-356619:-1:exon

position:356451:-1
position: 356451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356619:-1
position: 356619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:352608-352773:-1:exon

position:352608:-1
position: 352608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352773:-1
position: 352773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:351339-351389:-1:exon

position:351339:-1
position: 351339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351389:-1
position: 351389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:349883-350071:-1:exon

position:349883:-1
position: 349883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350071:-1
position: 350071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:348070-348226:-1:exon

position:348226:-1
position: 348226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009391
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009391
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: blue-sensitive opsin
translation: MQKSREMRDELPDDFYIPMTLETTNLTALSPFLVPQTHLGSPGIFRAMAAFMFLLIVLGVPINALTVVCTAKYKKLRSHLNYILVNLAVANLLVVCVGSTTAFYSFSQMYFALGPLACKIEGFAATLGGMVSLWSLAVVAFERFLVICKPLGNFTFRGSHAVLGCAITWIFGLIASVPPLFGWSRYIPEGLQCSCGPDWYTTDNKWNNESYVIFLFCFCFGFPLSVIVFSYGRLLLTLRAVAKQQEQSATTQKAEREVTKMVVVMVLGFLVCWLPYTSFALWVVTHRGHPFDVGLASIPSVFSKASTVYNPIIYVFMNKQFRSCMLKLVFCGRSPFGDEDDVSGSSQATQVSSVSSSQVSPA
SIO_010081: LOC117009391
subclass of: SO_0000673
so part of: LOC117009391
location: complement(join(348098..348226,349883..350071,351339..351389,352608..352773,356451..356619,358596..358980))
location: region:348098-358980:-1
so has part: feature:358596-358980:-1:exon
so has part: feature:356451-356619:-1:exon
so has part: feature:352608-352773:-1:exon
so has part: feature:351339-351389:-1:exon
so has part: feature:349883-350071:-1:exon
so has part: feature:348098-348226:-1:exon

XP_032939523.1
type: Protein
SIO_000068: ncbiprotein

position:348098:-1
position: 348098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358980:-1
position: 358980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358596-358980:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:356451-356619:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:352608-352773:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:351339-351389:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:349883-350071:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:348098-348226:-1:exon

MECP2
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: MECP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 361794..368751
location: region:361794-368751:1
so has part: feature:361794-368751:1:exon
subclass of: SO_0000010

117009216
type: Gene
SIO_000068: ncbigene

position:361794:1
position: 361794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368751:1
position: 368751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361794-368751:1:exon

MECP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: MECP2
product: methyl-CpG binding protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033083456.1
SIO_010081: MECP2
subclass of: SO_0000673
so part of: MECP2
location: join(361794..361869,367141..367449,367525..368751)
location: region:361794-368751:1
so has part: feature:361794-361869:1:exon
so has part: feature:367141-367449:1:exon
so has part: feature:367525-368751:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:361794-361869:1:exon

position:361869:1
position: 361869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:367141-367449:1:exon

position:367141:1
position: 367141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367449:1
position: 367449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:367525-368751:1:exon

position:367525:1
position: 367525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MECP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: MECP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methyl-CpG-binding protein 2
translation: MAAAAPSGDEGRLEEKPEENLQRPPKAKKPKKSVKEPEPAQPAAEPAEAGKAESSEGAGAAPAAPEASASPKQRRSIIRDRGPMYDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELIAYFEKVGDTSLDPNDFDFTVTGRGSPSRREQRPPKKPKTPKGPGTGRGRGRPKGSGGGGGASRPKAATAVSEGGSAAKRALEKPPGKLLVKMPFVPGQPGPAAPPAPRRPGRKRRAEPDSPAVPKKRGRKPAGATGPGGPGGPDKKAATPPAVQETVLPIKKRKTRETVVVEPVTMAASATATTTTPRPPPTPPGARGPRSARSPGRRSKEGSPKGRGAPPAPPPPPPPPPEPPQSDPKDSASPPPPPPPPPPPPPQDLSGCSEQRGGPAAPDGCTKEPPKTQPPPPPLPPSPPYKHRGEPEHKDSASSSSTSSSSSSSSSSSSSSSSAPPPPPPPPSVAVPRPPAREEPVDTRTPVPERVS
SIO_010081: MECP2
subclass of: SO_0000673
so part of: MECP2
location: join(361832..361869,367141..367449,367525..368653)
location: region:361832-368653:1
so has part: feature:361832-361869:1:exon
so has part: feature:367141-367449:1:exon
so has part: feature:367525-368653:1:exon

XP_032939347.1
type: Protein
SIO_000068: ncbiprotein

position:361832:1
position: 361832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368653:1
position: 368653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361832-361869:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:367141-367449:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:367525-368653:1:exon

HCFC1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: HCFC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 374224..422515
location: region:374224-422515:1
so has part: feature:374224-422515:1:exon
subclass of: SO_0000010

117009217
type: Gene
SIO_000068: ncbigene

position:374224:1
position: 374224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422515:1
position: 422515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374224-422515:1:exon

HCFC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: HCFC1
product: host cell factor C1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083457.2
SIO_010081: HCFC1
subclass of: SO_0000673
so part of: HCFC1
location: join(374224..374387,374600..374795,379424..379650,380516..380664,382358..382518,386436..386644,389095..389179,389577..389683,391953..392132,393652..393992,394083..394155,395747..395907,397893..398090,399126..399356,401741..401845,402648..402870,403746..403888,404783..404921,406079..406284,407575..409495,409581..409759,410674..411094,412806..412997,413041..413199,414734..414855,416637..416771,418936..419121,420767..421067,421870..421933,422449..422515)
location: region:374224-422515:1
so has part: feature:374224-374387:1:exon
so has part: feature:374600-374795:1:exon
so has part: feature:379424-379650:1:exon
so has part: feature:380516-380664:1:exon
so has part: feature:382358-382518:1:exon
so has part: feature:386436-386644:1:exon
so has part: feature:389095-389179:1:exon
so has part: feature:389577-389683:1:exon
so has part: feature:391953-392132:1:exon
so has part: feature:393652-393992:1:exon
so has part: feature:394083-394155:1:exon
so has part: feature:395747-395907:1:exon
so has part: feature:397893-398090:1:exon
so has part: feature:399126-399356:1:exon
so has part: feature:401741-401845:1:exon
so has part: feature:402648-402870:1:exon
so has part: feature:403746-403888:1:exon
so has part: feature:404783-404921:1:exon
so has part: feature:406079-406284:1:exon
so has part: feature:407575-409495:1:exon
so has part: feature:409581-409759:1:exon
so has part: feature:410674-411094:1:exon
so has part: feature:412806-412997:1:exon
so has part: feature:413041-413199:1:exon
so has part: feature:414734-414855:1:exon
so has part: feature:416637-416771:1:exon
so has part: feature:418936-419121:1:exon
so has part: feature:420767-421067:1:exon
so has part: feature:421870-421933:1:exon
so has part: feature:422449-422515:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:374224-374387:1:exon

position:374387:1
position: 374387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:374600-374795:1:exon

position:374600:1
position: 374600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374795:1
position: 374795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:379424-379650:1:exon

position:379424:1
position: 379424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379650:1
position: 379650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:380516-380664:1:exon

position:380516:1
position: 380516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380664:1
position: 380664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:382358-382518:1:exon

position:382358:1
position: 382358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382518:1
position: 382518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:386436-386644:1:exon

position:386436:1
position: 386436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386644:1
position: 386644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:389095-389179:1:exon

position:389095:1
position: 389095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389179:1
position: 389179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:389577-389683:1:exon

position:389577:1
position: 389577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389683:1
position: 389683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:391953-392132:1:exon

position:391953:1
position: 391953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392132:1
position: 392132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:393652-393992:1:exon

position:393652:1
position: 393652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393992:1
position: 393992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:394083-394155:1:exon

position:394083:1
position: 394083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394155:1
position: 394155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:395747-395907:1:exon

position:395747:1
position: 395747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395907:1
position: 395907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:397893-398090:1:exon

position:397893:1
position: 397893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398090:1
position: 398090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:399126-399356:1:exon

position:399126:1
position: 399126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399356:1
position: 399356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:401741-401845:1:exon

position:401741:1
position: 401741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401845:1
position: 401845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:402648-402870:1:exon

position:402648:1
position: 402648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402870:1
position: 402870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:403746-403888:1:exon

position:403746:1
position: 403746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403888:1
position: 403888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:404783-404921:1:exon

position:404783:1
position: 404783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404921:1
position: 404921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:406079-406284:1:exon

position:406079:1
position: 406079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406284:1
position: 406284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:407575-409495:1:exon

position:407575:1
position: 407575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409495:1
position: 409495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:409581-409759:1:exon

position:409581:1
position: 409581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409759:1
position: 409759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:410674-411094:1:exon

position:410674:1
position: 410674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:411094:1
position: 411094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:412806-412997:1:exon

position:412806:1
position: 412806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412997:1
position: 412997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:413041-413199:1:exon

position:413041:1
position: 413041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413199:1
position: 413199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:414734-414855:1:exon

position:414734:1
position: 414734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414855:1
position: 414855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:416637-416771:1:exon

position:416637:1
position: 416637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416771:1
position: 416771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:418936-419121:1:exon

position:418936:1
position: 418936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419121:1
position: 419121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:420767-421067:1:exon

position:420767:1
position: 420767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421067:1
position: 421067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:421870-421933:1:exon

position:421870:1
position: 421870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421933:1
position: 421933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:422449-422515:1:exon

position:422449:1
position: 422449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HCFC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: HCFC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: host cell factor 1
translation: MAGLGGGGSPPRAPPGPPSLQPRWKRVVGWAGPVPRPRHGHRAVAIKELIVVFGGGNEGIVDELHVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYVLELRPGSGVLAWDIPITYGVLPPPRESHTAVVYTERDGRRSRLVIYGGMSGCRLGDLWTLDIETLTWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDSMAWEPLVLETLEDNVPRARAGHCAVAIATRLYIWSGRDGYRKAWNNQVCCKDLWYLETERPPAPGRVQLVRANTTSLEVSWGAVPTADSYLLQLQKYELPAAPAPPPVPSVPANPPKSPAPAAPAPPPAPPGALPQLGGVGLTLLSPGPAAPQNPPGAAAAAAGVTPGGTAGVLPATAGGATAAAATGAGTAGRAPGVPAVLKVTGPPAATAGPPLVTVRSAGPGKAPVTVTSLPAGVRMVVPTQSPQGTVIGSSPQMSGMAALAAAAAATQKIPPASAPTVLSVPAGATIVKTVAVTPGATTLPATVKVASSPVMVSNPATRMLKTAAAQVGTAGTSPAATNAATRPIITVHKSGTVTVAQQAQVVTTVVGGVTKTITLVKSPISVPGGSALISNLGKVMSVVQTKPVQSSAVTGQASSGPVTQIIQTKGPLPAGTILKLVTSGEGKPTTILTSTQAGAGAAKPPTILGISSVSPSTTKAGTTTIIKTIPMSAIITQSGATGVTSSPGIKSPITIITTKVMTSGTGTPAKIITAVPKLGGGHGQQGVTQVVLKGAPGQPGTILRTVPMGGVRLVTPVTVSAVKPTVTTLVVKGTTGVTTLGTVTGTVSTSLAGGAGGHSATASLATPITTLGTIATLSSQVLNPAAITATAAGGGLGTPTITMQPVSQPTQVTLITTPSGVEAQPVHDLPVSILASPTAEGPPAATSAGVTLSEATPAEATAGTVTLVCSNPPCETHETGTTNTATTSLVATVGTGGGQQQLQLLCEDTGGGTALPPPPRACSNPPCETHDTGTTNTATTAAGTARLGTPGGPPCPTQQTVATGTTMTARLCPPPAAVPEGGGTAGGTCQTQEVTSPPCQTPWGQPEVGTATNVVTAATTGSCETPVGTRLCSNPPCETHETGTTNTVTVTGSQLCSNPPCETHETGTTNTVTVTGSQLCSNPPCETHETGTTNTVTVTGSQFCSNPPCETHETGTTNTVTVTGSQLCSNPPCETHETGTTNTVTVTGSQFCSNPPCETHETGTTNTVTVTGSQFCSNPPCETHETGTTNTVTMTAARPPCSNPPCETHETGTTNTVTTTAPRPPCSNPPCETHETGTTNTVTTTGTRFCSNPPCETHETGTTNTATTTTATSESGTSVPPPRGVPPCSNPPCETHETGTTNTVTMTSSQLCSNPPCETHETGTTNTATTATAGSRQGDTTTATSAATTSAATTTTTGGSPPCATPPCEPEPGATSTATTTAGSPPCQGHQSGATSSEGVTPPPPCATSATSPPRACSNPPCETHETGTTATATTVTASMGASQEPPPPAANGQGEGEAPPAEGGGPPVPPGTPSPGPSGAGTPQPRAVTTVTQSTPAPGPAVPTISSLTESPPAPPETPPSTAPTPPGDPHPPPAPSPAPAPAPSPPGPEAAAAEPGGGSPEPLAVVVLPPPGGDGGGPEGLALPPELLAEAGGAGGPPGLTPEELAVTAAAEAAAAAAASEEAQAQALAIQAVLQAAQQAVMGTSEPLEPGEPGGGPPELGAALGVSEGAGGAGGALPLVLTQQELAALVQHQQHLAETGTAPPATPAPPPPQAAAPPPHLPTEALAPADSLNDPAGDSNGLGELGGAPPAGLLIPPGDGLAPSSAFVAPPGPAVAPSPAKLQAAAALAEVANGIESTPVKPEPGAPPKALPKKENQWFDVGVIKGTTM…
SIO_010081: HCFC1
subclass of: SO_0000673
so part of: HCFC1
location: join(379443..379650,380516..380664,382358..382518,386436..386644,389095..389179,389577..389683,391953..392132,393652..393992,394083..394155,395747..395907,397893..398090,399126..399356,401741..401845,402648..402870,403746..403888,404783..404921,406079..406284,407575..409495,409581..409759,410674..411094,412806..412997,413041..413199,414734..414855,416637..416771,418936..419121,420767..421067,421870..421933,422449..422488)
location: region:379443-422488:1
so has part: feature:379443-379650:1:exon
so has part: feature:380516-380664:1:exon
so has part: feature:382358-382518:1:exon
so has part: feature:386436-386644:1:exon
so has part: feature:389095-389179:1:exon
so has part: feature:389577-389683:1:exon
so has part: feature:391953-392132:1:exon
so has part: feature:393652-393992:1:exon
so has part: feature:394083-394155:1:exon
so has part: feature:395747-395907:1:exon
so has part: feature:397893-398090:1:exon
so has part: feature:399126-399356:1:exon
so has part: feature:401741-401845:1:exon
so has part: feature:402648-402870:1:exon
so has part: feature:403746-403888:1:exon
so has part: feature:404783-404921:1:exon
so has part: feature:406079-406284:1:exon
so has part: feature:407575-409495:1:exon
so has part: feature:409581-409759:1:exon
so has part: feature:410674-411094:1:exon
so has part: feature:412806-412997:1:exon
so has part: feature:413041-413199:1:exon
so has part: feature:414734-414855:1:exon
so has part: feature:416637-416771:1:exon
so has part: feature:418936-419121:1:exon
so has part: feature:420767-421067:1:exon
so has part: feature:421870-421933:1:exon
so has part: feature:422449-422488:1:exon

XP_032939348.1
type: Protein
SIO_000068: ncbiprotein

position:379443:1
position: 379443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422488:1
position: 422488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379443-379650:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:380516-380664:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:382358-382518:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:386436-386644:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:389095-389179:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389577-389683:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:391953-392132:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:393652-393992:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:394083-394155:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:395747-395907:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:397893-398090:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:399126-399356:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:401741-401845:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:402648-402870:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:403746-403888:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:404783-404921:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:406079-406284:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:407575-409495:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:409581-409759:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:410674-411094:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:412806-412997:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:413041-413199:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:414734-414855:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:416637-416771:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:418936-419121:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:420767-421067:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:421870-421933:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:422449-422488:1:exon

LOC117009273
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009273
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 423904..442388
location: region:423904-442388:1
so has part: feature:423904-442388:1:exon
subclass of: SO_0000010

117009273
type: Gene
SIO_000068: ncbigene

position:423904:1
position: 423904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442388:1
position: 442388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423904-442388:1:exon

LOC117009273
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009273
product: renin binding protein, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083505.1
SIO_010081: LOC117009273
subclass of: SO_0000673
so part of: LOC117009273
location: join(423904..423995,424587..424697,425368..425443,425553..425628,427849..428021,433937..434018,437785..437960,440709..440840,441962..442049,442159..442388)
location: region:423904-442388:1
so has part: feature:423904-423995:1:exon
so has part: feature:424587-424697:1:exon
so has part: feature:425368-425443:1:exon
so has part: feature:425553-425628:1:exon
so has part: feature:427849-428021:1:exon
so has part: feature:433937-434018:1:exon
so has part: feature:437785-437960:1:exon
so has part: feature:440709-440840:1:exon
so has part: feature:441962-442049:1:exon
so has part: feature:442159-442388:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:423904-423995:1:exon

position:423995:1
position: 423995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:424587-424697:1:exon

position:424587:1
position: 424587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424697:1
position: 424697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:425368-425443:1:exon

position:425368:1
position: 425368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425443:1
position: 425443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:425553-425628:1:exon

position:425553:1
position: 425553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425628:1
position: 425628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:427849-428021:1:exon

position:427849:1
position: 427849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428021:1
position: 428021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:433937-434018:1:exon

position:433937:1
position: 433937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434018:1
position: 434018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:437785-437960:1:exon

position:437785:1
position: 437785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437960:1
position: 437960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:440709-440840:1:exon

position:440709:1
position: 440709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440840:1
position: 440840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:441962-442049:1:exon

position:441962:1
position: 441962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442049:1
position: 442049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:442159-442388:1:exon

position:442159:1
position: 442159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117009273
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009273
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-acylglucosamine 2-epimerase isoform X1
translation: MSRWAGLRKGRGQEGGGALSRGLVTGQRPRAPSPGMEQLRAWRGRIGAELDAAVEFWERHSHDPEHGGFFSCLSRDGSVYDDTKFVWMQGRQIWVYSRLYRTVPRFRRPELIQAARKAGEFLQSHARPQAGSTRAAFALSRDGRPERLQRSFYSEAFCALGLDELGRATGESKYRRGDSVVLENVSPEGEELPGSLGRLMNPGHALEGAWLLLQFCQRRGDAELGARAVTALLEGPLKWGWDPQHGGLFYFLDADGHCPTQLEWSMKLWWPHLEAMVALLAAHLFQPQPSLISQFLQLAQFTFDKFRDPEHGEFFGYLNRDGSVALSIKGGPYKGCFHVARALLMCEEMLGAILEREGAAGEK
SIO_010081: LOC117009273
subclass of: SO_0000673
so part of: LOC117009273
location: join(423907..423995,424587..424697,425368..425443,425553..425628,427849..428021,433937..434018,437785..437960,440709..440840,441962..442049,442159..442247)
location: region:423907-442247:1
so has part: feature:423907-423995:1:exon
so has part: feature:424587-424697:1:exon
so has part: feature:425368-425443:1:exon
so has part: feature:425553-425628:1:exon
so has part: feature:427849-428021:1:exon
so has part: feature:433937-434018:1:exon
so has part: feature:437785-437960:1:exon
so has part: feature:440709-440840:1:exon
so has part: feature:441962-442049:1:exon
so has part: feature:442159-442247:1:exon

XP_032939396.1
type: Protein
SIO_000068: ncbiprotein

position:423907:1
position: 423907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442247:1
position: 442247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423907-423995:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:424587-424697:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:425368-425443:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:425553-425628:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:427849-428021:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:433937-434018:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:437785-437960:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:440709-440840:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:441962-442049:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:442159-442247:1:exon

LOC117009273
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009273
product: renin binding protein, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083506.2
SIO_010081: LOC117009273
subclass of: SO_0000673
so part of: LOC117009273
location: join(423941..423995,424601..424697,425368..425443,425553..425628,427849..428021,433937..434018,437785..437960,440709..440840,441962..442049,442159..442388)
location: region:423941-442388:1
so has part: feature:423941-423995:1:exon
so has part: feature:424601-424697:1:exon
so has part: feature:425368-425443:1:exon
so has part: feature:425553-425628:1:exon
so has part: feature:427849-428021:1:exon
so has part: feature:433937-434018:1:exon
so has part: feature:437785-437960:1:exon
so has part: feature:440709-440840:1:exon
so has part: feature:441962-442049:1:exon
so has part: feature:442159-442388:1:exon

position:423941:1
position: 423941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423941-423995:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:424601-424697:1:exon

position:424601:1
position: 424601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:425368-425443:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:425553-425628:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:427849-428021:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:433937-434018:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:437785-437960:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:440709-440840:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:441962-442049:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:442159-442388:1:exon

LOC117009273
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009273
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-acylglucosamine 2-epimerase isoform X2
translation: MEQLRAWRGRIGAELDAAVEFWERHSHDPEHGGFFSCLSRDGSVYDDTKFVWMQGRQIWVYSRLYRTVPRFRRPELIQAARKAGEFLQSHARPQAGSTRAAFALSRDGRPERLQRSFYSEAFCALGLDELGRATGESKYRRGDSVVLENVSPEGEELPGSLGRLMNPGHALEGAWLLLQFCQRRGDAELGARAVTALLEGPLKWGWDPQHGGLFYFLDADGHCPTQLEWSMKLWWPHLEAMVALLAAHLFQPQPSLISQFLQLAQFTFDKFRDPEHGEFFGYLNRDGSVALSIKGGPYKGCFHVARALLMCEEMLGAILEREGAAGEK
SIO_010081: LOC117009273
subclass of: SO_0000673
so part of: LOC117009273
location: join(424603..424697,425368..425443,425553..425628,427849..428021,433937..434018,437785..437960,440709..440840,441962..442049,442159..442247)
location: region:424603-442247:1
so has part: feature:424603-424697:1:exon
so has part: feature:425368-425443:1:exon
so has part: feature:425553-425628:1:exon
so has part: feature:427849-428021:1:exon
so has part: feature:433937-434018:1:exon
so has part: feature:437785-437960:1:exon
so has part: feature:440709-440840:1:exon
so has part: feature:441962-442049:1:exon
so has part: feature:442159-442247:1:exon

XP_032939397.1
type: Protein
SIO_000068: ncbiprotein

position:424603:1
position: 424603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424603-424697:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:425368-425443:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:425553-425628:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:427849-428021:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:433937-434018:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:437785-437960:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:440709-440840:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:441962-442049:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:442159-442247:1:exon

RPL10
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: RPL10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 443453..456242
location: region:443453-456242:1
so has part: feature:443453-456242:1:exon
subclass of: SO_0000010

117009274
type: Gene
SIO_000068: ncbigene

position:443453:1
position: 443453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456242:1
position: 456242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443453-456242:1:exon

RPL10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: RPL10
product: ribosomal protein L10, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_033083509.1
SIO_010081: RPL10
subclass of: SO_0000673
so part of: RPL10
location: join(443453..443502,443633..443677,445223..445281,445355..445462,449353..449491,453216..453378,455748..455858)
location: region:443453-455858:1
so has part: feature:443453-443502:1:exon
so has part: feature:443633-443677:1:exon
so has part: feature:445223-445281:1:exon
so has part: feature:445355-445462:1:exon
so has part: feature:449353-449491:1:exon
so has part: feature:453216-453378:1:exon
so has part: feature:455748-455858:1:exon

position:455858:1
position: 455858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443453-443502:1:exon

position:443502:1
position: 443502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:443633-443677:1:exon

position:443633:1
position: 443633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443677:1
position: 443677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:445223-445281:1:exon

position:445223:1
position: 445223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445281:1
position: 445281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:445355-445462:1:exon

position:445355:1
position: 445355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445462:1
position: 445462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:449353-449491:1:exon

position:449353:1
position: 449353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449491:1
position: 449491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:453216-453378:1:exon

position:453216:1
position: 453216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453378:1
position: 453378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:455748-455858:1:exon

position:455748:1
position: 455748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPL10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: RPL10
product: ribosomal protein L10, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083507.2
SIO_010081: RPL10
subclass of: SO_0000673
so part of: RPL10
location: join(443454..443502,443633..443677,445223..445281,445355..445462,449353..449491,453216..453336,453669..453710,455934..456242)
location: region:443454-456242:1
so has part: feature:443454-443502:1:exon
so has part: feature:443633-443677:1:exon
so has part: feature:445223-445281:1:exon
so has part: feature:445355-445462:1:exon
so has part: feature:449353-449491:1:exon
so has part: feature:453216-453336:1:exon
so has part: feature:453669-453710:1:exon
so has part: feature:455934-456242:1:exon

position:443454:1
position: 443454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443454-443502:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443633-443677:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:445223-445281:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:445355-445462:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:449353-449491:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:453216-453336:1:exon

position:453336:1
position: 453336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:453669-453710:1:exon

position:453669:1
position: 453669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453710:1
position: 453710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:455934-456242:1:exon

position:455934:1
position: 455934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPL10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: RPL10
product: ribosomal protein L10, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083508.2
SIO_010081: RPL10
subclass of: SO_0000673
so part of: RPL10
location: join(443455..443502,443633..443677,445223..445281,445355..445462,449353..449491,453216..453378,455934..456242)
location: region:443455-456242:1
so has part: feature:443455-443502:1:exon
so has part: feature:443633-443677:1:exon
so has part: feature:445223-445281:1:exon
so has part: feature:445355-445462:1:exon
so has part: feature:449353-449491:1:exon
so has part: feature:453216-453378:1:exon
so has part: feature:455934-456242:1:exon

position:443455:1
position: 443455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443455-443502:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443633-443677:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:445223-445281:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:445355-445462:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:449353-449491:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:453216-453378:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:455934-456242:1:exon

RPL10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: RPL10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L10 isoform X1
translation: MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKAQNKEHVVEALRRAKFKFPGRQKIHISKKWGFTKFNADAFEDMVAQKRLIPDGCGVKYVPSRGPLERWRALHA
SIO_010081: RPL10
subclass of: SO_0000673
so part of: RPL10
location: join(443655..443677,445223..445281,445355..445462,449353..449491,453216..453378,455934..456086)
location: region:443655-456086:1
so has part: feature:443655-443677:1:exon
so has part: feature:445223-445281:1:exon
so has part: feature:445355-445462:1:exon
so has part: feature:449353-449491:1:exon
so has part: feature:453216-453378:1:exon
so has part: feature:455934-456086:1:exon

XP_032939399.1
type: Protein
SIO_000068: ncbiprotein

position:443655:1
position: 443655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456086:1
position: 456086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443655-443677:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:445223-445281:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:445355-445462:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:449353-449491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453216-453378:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:455934-456086:1:exon

RPL10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: RPL10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L10 isoform X2
translation: MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKAQNKEHVVEALRRAKFKFPGRQKIHISKKWGFTKFNADAFEDMVAQKRLIPDGCGVKYVPSRGPLERWRALHA
SIO_010081: RPL10
subclass of: SO_0000673
so part of: RPL10
location: join(443655..443677,445223..445281,445355..445462,449353..449491,453216..453336,453669..453710,455934..456086)
location: region:443655-456086:1
so has part: feature:443655-443677:1:exon
so has part: feature:445223-445281:1:exon
so has part: feature:445355-445462:1:exon
so has part: feature:449353-449491:1:exon
so has part: feature:453216-453336:1:exon
so has part: feature:453669-453710:1:exon
so has part: feature:455934-456086:1:exon

XP_032939398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:443655-443677:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:445223-445281:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:445355-445462:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:449353-449491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453216-453336:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:453669-453710:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:455934-456086:1:exon

RPL10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: RPL10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L10 isoform X3
translation: MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKAQNKEHVVEALRRAKFKFPGRQKIHISKKLGFNNMGEPKIPNLKRRMGFCGQKH
SIO_010081: RPL10
subclass of: SO_0000673
so part of: RPL10
location: join(443655..443677,445223..445281,445355..445462,449353..449491,453216..453378,455748..455843)
location: region:443655-455843:1
so has part: feature:443655-443677:1:exon
so has part: feature:445223-445281:1:exon
so has part: feature:445355-445462:1:exon
so has part: feature:449353-449491:1:exon
so has part: feature:453216-453378:1:exon
so has part: feature:455748-455843:1:exon

XP_032939400.1
type: Protein
SIO_000068: ncbiprotein

position:455843:1
position: 455843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443655-443677:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:445223-445281:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:445355-445462:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:449353-449491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:453216-453378:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:455748-455843:1:exon

LOC117009414
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009414
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 450670..450807
location: region:450670-450807:1
so has part: feature:450670-450807:1:exon
subclass of: SO_0000578

117009414
type: Gene
SIO_000068: ncbigene

position:450670:1
position: 450670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450807:1
position: 450807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450670-450807:1:exon

LOC117009414
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: snoRNA
gene: LOC117009414
product: small nucleolar RNA SNORA70
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00156
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004420476.1
SIO_010081: LOC117009414
subclass of: SO_0000673
so part of: LOC117009414
location: 450670..450807
location: region:450670-450807:1
so has part: feature:450670-450807:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:450670-450807:1:exon

PDZD4
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: PDZD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(459241..478456)
location: region:459241-478456:-1
so has part: feature:459241-478456:-1:exon
subclass of: SO_0000010

117009206
type: Gene
SIO_000068: ncbigene

position:459241:-1
position: 459241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478456:-1
position: 478456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459241-478456:-1:exon

PDZD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PDZD4
product: PDZ domain containing 4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083447.1
SIO_010081: PDZD4
subclass of: SO_0000673
so part of: PDZD4
location: complement(join(459241..461540,464687..464779,466439..466540,469281..469343,470565..470657,473978..474053,475308..475543,478355..478456))
location: region:459241-478456:-1
so has part: feature:478355-478456:-1:exon
so has part: feature:475308-475543:-1:exon
so has part: feature:473978-474053:-1:exon
so has part: feature:470565-470657:-1:exon
so has part: feature:469281-469343:-1:exon
so has part: feature:466439-466540:-1:exon
so has part: feature:464687-464779:-1:exon
so has part: feature:459241-461540:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:478355-478456:-1:exon

position:478355:-1
position: 478355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:475308-475543:-1:exon

position:475308:-1
position: 475308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475543:-1
position: 475543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:473978-474053:-1:exon

position:473978:-1
position: 473978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474053:-1
position: 474053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:470565-470657:-1:exon

position:470565:-1
position: 470565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:470657:-1
position: 470657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:469281-469343:-1:exon

position:469281:-1
position: 469281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:469343:-1
position: 469343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:466439-466540:-1:exon

position:466439:-1
position: 466439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:466540:-1
position: 466540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:464687-464779:-1:exon

position:464687:-1
position: 464687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464779:-1
position: 464779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:459241-461540:-1:exon

position:461540:-1
position: 461540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PDZD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PDZD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PDZ domain-containing protein 4
translation: MGCNMCVVQKPEEQHRVMLQVSGKEGSRRGGPRGGSKEPLVLQVLRRSPRGGPPETPPAPIWGGGGGGPGPPPALGGALVDSGTQTDISFESRLGGSEPPPLPQDYFDPADLGEPERPEELEYEEVELYKTSHKLGITVCYRTDGEEDPGIYVGEVNPNSIAAKDGRIREGDRIVQINGVEIQDREEAVAFLTREQQTNISLLLARPESQRWKDSDREDFLDEFGSDEEGELRGAWTPPGQPPSPATPVGGRGAEPDSGVGRTDESTRNEESSEHDLLGEEGGEGPPAPPRPPPPRRDPQIPPNSPQNPPQSQPRLHAKPGAGGAAARTGSNSGSGSGCGSAGRAGSGAGGRRGAGLEAGLGPALGPALGLGLGSGLGLGAGSPPLSPAELRRYRALRGAGAAGPGRAELARLEEELRHLEFKCRHLLRAQQLERLRERGRRAWRDPRPGVEGPLADIAEAPERDSTSAYNSGESSRSSPLLLRAALGPAPPAPPAPPGPSKAPRGKRPGRDRLLKARAIKILEERGGSTDDDARSELKTGRYWSREQRKQHLARAREQRRRRELLLQGRAEPPAGLGAAPSAAEPPPHGQGSRRGLRKRSRRILDNWVTIQEMMLAQHGGRAEHPLLSVTTV
SIO_010081: PDZD4
subclass of: SO_0000673
so part of: PDZD4
location: complement(join(460362..461540,464687..464779,466439..466540,469281..469343,470565..470657,473978..474053,475308..475543,478355..478414))
location: region:460362-478414:-1
so has part: feature:478355-478414:-1:exon
so has part: feature:475308-475543:-1:exon
so has part: feature:473978-474053:-1:exon
so has part: feature:470565-470657:-1:exon
so has part: feature:469281-469343:-1:exon
so has part: feature:466439-466540:-1:exon
so has part: feature:464687-464779:-1:exon
so has part: feature:460362-461540:-1:exon

XP_032939338.1
type: Protein
SIO_000068: ncbiprotein

position:460362:-1
position: 460362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478414:-1
position: 478414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478355-478414:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:475308-475543:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:473978-474053:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:470565-470657:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:469281-469343:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:466439-466540:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:464687-464779:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:460362-461540:-1:exon

L1CAM
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: L1CAM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(480854..550598)
location: region:480854-550598:-1
so has part: feature:480854-550598:-1:exon
subclass of: SO_0000010

117009307
type: Gene
SIO_000068: ncbigene

position:480854:-1
position: 480854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550598:-1
position: 550598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480854-550598:-1:exon

L1CAM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: L1CAM
product: L1 cell adhesion molecule
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
transcript id: XM_033083540.1
SIO_010081: L1CAM
subclass of: SO_0000673
so part of: L1CAM
location: complement(join(480854..481946,483342..483353,483602..483674,485273..485404,489589..489753,490784..490906,493271..493441,495219..495341,497314..497548,502570..502688,504575..504800,507862..507932,512018..512215,515045..515146,517596..517720,522544..522703,524738..524904,526515..526626,530672..530815,532700..532831,534958..535142,536065..536176,537666..537836,539195..539318,540820..541004,543743..543848,544976..544990,545793..545902,550535..550598))
location: region:480854-550598:-1
so has part: feature:550535-550598:-1:exon
so has part: feature:545793-545902:-1:exon
so has part: feature:544976-544990:-1:exon
so has part: feature:543743-543848:-1:exon
so has part: feature:540820-541004:-1:exon
so has part: feature:539195-539318:-1:exon
so has part: feature:537666-537836:-1:exon
so has part: feature:536065-536176:-1:exon
so has part: feature:534958-535142:-1:exon
so has part: feature:532700-532831:-1:exon
so has part: feature:530672-530815:-1:exon
so has part: feature:526515-526626:-1:exon
so has part: feature:524738-524904:-1:exon
so has part: feature:522544-522703:-1:exon
so has part: feature:517596-517720:-1:exon
so has part: feature:515045-515146:-1:exon
so has part: feature:512018-512215:-1:exon
so has part: feature:507862-507932:-1:exon
so has part: feature:504575-504800:-1:exon
so has part: feature:502570-502688:-1:exon
so has part: feature:497314-497548:-1:exon
so has part: feature:495219-495341:-1:exon
so has part: feature:493271-493441:-1:exon
so has part: feature:490784-490906:-1:exon
so has part: feature:489589-489753:-1:exon
so has part: feature:485273-485404:-1:exon
so has part: feature:483602-483674:-1:exon
so has part: feature:483342-483353:-1:exon
so has part: feature:480854-481946:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:550535-550598:-1:exon

position:550535:-1
position: 550535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:545793-545902:-1:exon

position:545793:-1
position: 545793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545902:-1
position: 545902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:544976-544990:-1:exon

position:544976:-1
position: 544976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544990:-1
position: 544990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:543743-543848:-1:exon

position:543743:-1
position: 543743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543848:-1
position: 543848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:540820-541004:-1:exon

position:540820:-1
position: 540820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541004:-1
position: 541004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:539195-539318:-1:exon

position:539195:-1
position: 539195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:539318:-1
position: 539318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:537666-537836:-1:exon

position:537666:-1
position: 537666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537836:-1
position: 537836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:536065-536176:-1:exon

position:536065:-1
position: 536065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536176:-1
position: 536176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:534958-535142:-1:exon

position:534958:-1
position: 534958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535142:-1
position: 535142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:532700-532831:-1:exon

position:532700:-1
position: 532700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532831:-1
position: 532831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:530672-530815:-1:exon

position:530672:-1
position: 530672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530815:-1
position: 530815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:526515-526626:-1:exon

position:526515:-1
position: 526515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526626:-1
position: 526626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:524738-524904:-1:exon

position:524738:-1
position: 524738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524904:-1
position: 524904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:522544-522703:-1:exon

position:522544:-1
position: 522544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522703:-1
position: 522703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:517596-517720:-1:exon

position:517596:-1
position: 517596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517720:-1
position: 517720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:515045-515146:-1:exon

position:515045:-1
position: 515045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:515146:-1
position: 515146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:512018-512215:-1:exon

position:512018:-1
position: 512018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512215:-1
position: 512215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:507862-507932:-1:exon

position:507862:-1
position: 507862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507932:-1
position: 507932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:504575-504800:-1:exon

position:504575:-1
position: 504575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504800:-1
position: 504800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:502570-502688:-1:exon

position:502570:-1
position: 502570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502688:-1
position: 502688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:497314-497548:-1:exon

position:497314:-1
position: 497314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:497548:-1
position: 497548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:495219-495341:-1:exon

position:495219:-1
position: 495219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:495341:-1
position: 495341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:493271-493441:-1:exon

position:493271:-1
position: 493271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:493441:-1
position: 493441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:490784-490906:-1:exon

position:490784:-1
position: 490784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490906:-1
position: 490906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:489589-489753:-1:exon

position:489589:-1
position: 489589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489753:-1
position: 489753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:485273-485404:-1:exon

position:485273:-1
position: 485273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485404:-1
position: 485404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:483602-483674:-1:exon

position:483602:-1
position: 483602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483674:-1
position: 483674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:483342-483353:-1:exon

position:483342:-1
position: 483342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483353:-1
position: 483353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:480854-481946:-1:exon

position:481946:-1
position: 481946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

L1CAM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: L1CAM
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: neural cell adhesion molecule L1
translation: MSTPRQPQPRAGSGRSRLPHPPRAAAMALPRGLGLVLLLLLGGRGRAIVIPPEYSLHELQQPPELTEQPPEQLVVFPSDDVTLKCAATGEPPVEFRWTREDRPFSGDLPGVSVSPGGGTLVINASVAGQLQGRFRCAATNALGTALSRESRVIAENTPQWPKEKVTPVQVDEGDPVVLPCDPPRSAVPPKIYWLNSQIVHIAQDARVSMGQDGFLYFANAQVGDTSPDYICHAHYLGPRTIIQKEPLDLRVAPSNSVQSRRPRLVVPRDPHPTHVALRGETLVLECIAEGLPTPWISWRRLNGPLPPGRAVLDNFNKTLRLRAVTEADDGEYECTAENGQGSARRSHGVTVEAAPYWVRRPRSAVFGPGETARLDCEVGGKPRPRISWSLNGIPLDELPDSGRRSLRDGALVLSRLEPNDSLVAQCEATNSHGRLLANAFVYVVELPVQILTPDGERYAAVENQTVILHCRTFGAPAPAVEWLTPTLEPALQDDRAFGFTNGSLRLGPVLRGDSGVFTCRAHNAHSNGSVSARLRVHAATRIAVPPQSVTAKKGESVTFSCGATFDPGLEPRGLLWLRDGTPVTESPDSDKFSVAGDSLTVAAVDYGDQGRFRCRAWTPLDAAEAEAELRVVGRPGPVRDLQLQELGERRIQLSWTPGEEHNSPVEKFVVEQEEGIFSPGRFQEVLTVPGSQPKARLVLSPYGSYRFRVLAVNGYGRGEPSAASAAISTDPAAPERYPMGVKGEGNETNNLVITWQPLSPGDWNAPQLRYRVQWRPLEPEGGPWAEATVESPPFVVRDTPTFSPFKIRVQALNDAGKGPEPPEVVGYSGEDLPLVYPENVGVEVLNSSSVLITWTLEGSTSRLRGHLRGYRVLYWRDGWVGERSRRHALPPATPEPPPQPGVLTVPGQASEALLGGLQPWSRYRLSVRVFNGRGAGPPSAEIHFHTPEGVPGPPEELRVERLGDTALGLEWRRPRLPNGVLSGYLLQYRLENQTEGEDLEISFPPGTLNTTLARLEPRGRYRLELRARTRHGPGEPLVRLGSLAPEPVLPVLGTIDFGEVGEDFTVLRWTLAQPQANIEFEVEYMSKTTEEPWRSSGRANSSLGRYRLGDLRPGTSYRVQFVGRNHSGERVAFWESEVQTNGTMLPRPAGGFATEGWFIGFVSAAVLLLLLLLILCFIKRSKGGKYSVKDKEDTQVDSEARPMKDETFGEYRSLESDGEEKASGSSGRSLGAAGAALGSDDSLAGYGGSADVQFNEDGSFIGQYSGTRGTAAGSSGPASPSAAAPLD
SIO_010081: L1CAM
subclass of: SO_0000673
so part of: L1CAM
location: complement(join(481730..481946,483342..483353,483602..483674,485273..485404,489589..489753,490784..490906,493271..493441,495219..495341,497314..497548,502570..502688,504575..504800,507862..507932,512018..512215,515045..515146,517596..517720,522544..522703,524738..524904,526515..526626,530672..530815,532700..532831,534958..535142,536065..536176,537666..537836,539195..539318,540820..541004,543743..543848,544976..544990,545793..545902,550535..550584))
location: region:481730-550584:-1
so has part: feature:550535-550584:-1:exon
so has part: feature:545793-545902:-1:exon
so has part: feature:544976-544990:-1:exon
so has part: feature:543743-543848:-1:exon
so has part: feature:540820-541004:-1:exon
so has part: feature:539195-539318:-1:exon
so has part: feature:537666-537836:-1:exon
so has part: feature:536065-536176:-1:exon
so has part: feature:534958-535142:-1:exon
so has part: feature:532700-532831:-1:exon
so has part: feature:530672-530815:-1:exon
so has part: feature:526515-526626:-1:exon
so has part: feature:524738-524904:-1:exon
so has part: feature:522544-522703:-1:exon
so has part: feature:517596-517720:-1:exon
so has part: feature:515045-515146:-1:exon
so has part: feature:512018-512215:-1:exon
so has part: feature:507862-507932:-1:exon
so has part: feature:504575-504800:-1:exon
so has part: feature:502570-502688:-1:exon
so has part: feature:497314-497548:-1:exon
so has part: feature:495219-495341:-1:exon
so has part: feature:493271-493441:-1:exon
so has part: feature:490784-490906:-1:exon
so has part: feature:489589-489753:-1:exon
so has part: feature:485273-485404:-1:exon
so has part: feature:483602-483674:-1:exon
so has part: feature:483342-483353:-1:exon
so has part: feature:481730-481946:-1:exon

XP_032939431.1
type: Protein
SIO_000068: ncbiprotein

position:481730:-1
position: 481730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550584:-1
position: 550584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550535-550584:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:545793-545902:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544976-544990:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:543743-543848:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:540820-541004:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:539195-539318:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:537666-537836:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:536065-536176:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534958-535142:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:532700-532831:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:530672-530815:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:526515-526626:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:524738-524904:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:522544-522703:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:517596-517720:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:515045-515146:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:512018-512215:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:507862-507932:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:504575-504800:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:502570-502688:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:497314-497548:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:495219-495341:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:493271-493441:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:490784-490906:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:489589-489753:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:485273-485404:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:483602-483674:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:483342-483353:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:481730-481946:-1:exon

SSR4
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: SSR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(554898..558969)
location: region:554898-558969:-1
so has part: feature:554898-558969:-1:exon
subclass of: SO_0000010

117009298
type: Gene
SIO_000068: ncbigene

position:554898:-1
position: 554898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558969:-1
position: 558969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554898-558969:-1:exon

SSR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SSR4
product: signal sequence receptor subunit 4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083530.1
SIO_010081: SSR4
subclass of: SO_0000673
so part of: SSR4
location: complement(join(554898..555039,556636..556701,556800..556889,557842..557916,558002..558120,558896..558969))
location: region:554898-558969:-1
so has part: feature:558896-558969:-1:exon
so has part: feature:558002-558120:-1:exon
so has part: feature:557842-557916:-1:exon
so has part: feature:556800-556889:-1:exon
so has part: feature:556636-556701:-1:exon
so has part: feature:554898-555039:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:558896-558969:-1:exon

position:558896:-1
position: 558896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:558002-558120:-1:exon

position:558002:-1
position: 558002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558120:-1
position: 558120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:557842-557916:-1:exon

position:557842:-1
position: 557842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:557916:-1
position: 557916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:556800-556889:-1:exon

position:556800:-1
position: 556800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556889:-1
position: 556889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:556636-556701:-1:exon

position:556636:-1
position: 556636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556701:-1
position: 556701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:554898-555039:-1:exon

position:555039:-1
position: 555039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SSR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SSR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translocon-associated protein subunit delta
translation: MAGAGVLPLLLLLLAASGAAGEPCPEPTIAPSYYTTSDAVIASESVFVVEISLVCKNGAQNVALYADVNGKQFPVTRGQDVGRYQVSWSLEHRQAQSGTYEVKFFDEESYSALRKAQRNNEDVSRIRPLFTVNVDHRGAWNGPWVSTEVVAAAIGLLVYYLAFSTKSSIQA
SIO_010081: SSR4
subclass of: SO_0000673
so part of: SSR4
location: complement(join(554935..555039,556636..556701,556800..556889,557842..557916,558002..558120,558896..558956))
location: region:554935-558956:-1
so has part: feature:558896-558956:-1:exon
so has part: feature:558002-558120:-1:exon
so has part: feature:557842-557916:-1:exon
so has part: feature:556800-556889:-1:exon
so has part: feature:556636-556701:-1:exon
so has part: feature:554935-555039:-1:exon

XP_032939421.1
type: Protein
SIO_000068: ncbiprotein

position:554935:-1
position: 554935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558956:-1
position: 558956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558896-558956:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:558002-558120:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:557842-557916:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:556800-556889:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:556636-556701:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:554935-555039:-1:exon

IDH3G
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: IDH3G
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 559409..577873
location: region:559409-577873:1
so has part: feature:559409-577873:1:exon
subclass of: SO_0000010

117009302
type: Gene
SIO_000068: ncbigene

position:559409:1
position: 559409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577873:1
position: 577873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559409-577873:1:exon

IDH3G
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: IDH3G
product: isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083537.2
SIO_010081: IDH3G
subclass of: SO_0000673
so part of: IDH3G
location: join(559409..559712,560188..560223,560483..560494,561810..561907,562724..562836,564588..564648,566050..566182,569059..569192,572563..572665,572749..572832,573002..573064,575874..575968,577309..577369,577480..577873)
location: region:559409-577873:1
so has part: feature:559409-559712:1:exon
so has part: feature:560188-560223:1:exon
so has part: feature:560483-560494:1:exon
so has part: feature:561810-561907:1:exon
so has part: feature:562724-562836:1:exon
so has part: feature:564588-564648:1:exon
so has part: feature:566050-566182:1:exon
so has part: feature:569059-569192:1:exon
so has part: feature:572563-572665:1:exon
so has part: feature:572749-572832:1:exon
so has part: feature:573002-573064:1:exon
so has part: feature:575874-575968:1:exon
so has part: feature:577309-577369:1:exon
so has part: feature:577480-577873:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:559409-559712:1:exon

position:559712:1
position: 559712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:560188-560223:1:exon

position:560188:1
position: 560188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560223:1
position: 560223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:560483-560494:1:exon

position:560483:1
position: 560483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560494:1
position: 560494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:561810-561907:1:exon

position:561810:1
position: 561810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561907:1
position: 561907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:562724-562836:1:exon

position:562724:1
position: 562724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562836:1
position: 562836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:564588-564648:1:exon

position:564588:1
position: 564588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564648:1
position: 564648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:566050-566182:1:exon

position:566050:1
position: 566050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566182:1
position: 566182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:569059-569192:1:exon

position:569059:1
position: 569059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:569192:1
position: 569192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:572563-572665:1:exon

position:572563:1
position: 572563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:572665:1
position: 572665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:572749-572832:1:exon

position:572749:1
position: 572749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:572832:1
position: 572832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:573002-573064:1:exon

position:573002:1
position: 573002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573064:1
position: 573064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:575874-575968:1:exon

position:575874:1
position: 575874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575968:1
position: 575968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:577309-577369:1:exon

position:577309:1
position: 577309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577369:1
position: 577369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:577480-577873:1:exon

position:577480:1
position: 577480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IDH3G
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: IDH3G
product: isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083536.2
SIO_010081: IDH3G
subclass of: SO_0000673
so part of: IDH3G
location: join(559415..559712,560188..560223,560483..560494,561810..561907,562724..562836,564588..564648,566050..566182,569059..569192,572563..572665,572749..572895,575874..575968,577309..577369,577480..577873)
location: region:559415-577873:1
so has part: feature:559415-559712:1:exon
so has part: feature:560188-560223:1:exon
so has part: feature:560483-560494:1:exon
so has part: feature:561810-561907:1:exon
so has part: feature:562724-562836:1:exon
so has part: feature:564588-564648:1:exon
so has part: feature:566050-566182:1:exon
so has part: feature:569059-569192:1:exon
so has part: feature:572563-572665:1:exon
so has part: feature:572749-572895:1:exon
so has part: feature:575874-575968:1:exon
so has part: feature:577309-577369:1:exon
so has part: feature:577480-577873:1:exon

position:559415:1
position: 559415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559415-559712:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:560188-560223:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:560483-560494:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:561810-561907:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:562724-562836:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:564588-564648:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:566050-566182:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:569059-569192:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:572563-572665:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:572749-572895:1:exon

position:572895:1
position: 572895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:575874-575968:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:577309-577369:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:577480-577873:1:exon

IDH3G
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: IDH3G
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial isoform X1
translation: MAAALTAARRRLVRAALRPHAVWIAQAGISHDAQRSIPPPAKYGGRHTVTLIPGDGIGPELMLHVKEVFRHACVPVDFEEVRVGSEAPEADVQNAITAIRRNGVALKGNIETNHNLPPNHKSRNNLIRTSLDLYANVIHCQSLPGVETRHRDIDILIVRENTEGEYSSLEHESVAGVVESLKIITAGRSRRIAHYAFGLARAAARRSVTAVHKANIMKLGDGLFLQCCQEVAAEYPEITFRSMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLVGGPGLVPGANYGHDYAVFETATRNTGKSIANRNIANPTATLLAACMMLDHLRLHSHASSIRQAVLASLDDPRTHTPDIGGQGTTSGAVQSIISHLSHT
SIO_010081: IDH3G
subclass of: SO_0000673
so part of: IDH3G
location: join(559650..559712,560188..560223,560483..560494,561810..561907,562724..562836,564588..564648,566050..566182,569059..569192,572563..572665,572749..572895,575874..575968,577309..577369,577480..577560)
location: region:559650-577560:1
so has part: feature:559650-559712:1:exon
so has part: feature:560188-560223:1:exon
so has part: feature:560483-560494:1:exon
so has part: feature:561810-561907:1:exon
so has part: feature:562724-562836:1:exon
so has part: feature:564588-564648:1:exon
so has part: feature:566050-566182:1:exon
so has part: feature:569059-569192:1:exon
so has part: feature:572563-572665:1:exon
so has part: feature:572749-572895:1:exon
so has part: feature:575874-575968:1:exon
so has part: feature:577309-577369:1:exon
so has part: feature:577480-577560:1:exon

XP_032939427.1
type: Protein
SIO_000068: ncbiprotein

position:559650:1
position: 559650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577560:1
position: 577560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559650-559712:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:560188-560223:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:560483-560494:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:561810-561907:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:562724-562836:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:564588-564648:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:566050-566182:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:569059-569192:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:572563-572665:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:572749-572895:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:575874-575968:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:577309-577369:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:577480-577560:1:exon

IDH3G
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: IDH3G
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial isoform X2
translation: MAAALTAARRRLVRAALRPHAVWIAQAGISHDAQRSIPPPAKYGGRHTVTLIPGDGIGPELMLHVKEVFRHACVPVDFEEVRVGSEAPEADVQNAITAIRRNGVALKGNIETNHNLPPNHKSRNNLIRTSLDLYANVIHCQSLPGVETRHRDIDILIVRENTEGEYSSLEHESVAGVVESLKIITAGRSRRIAHYAFGLARAAARRSVTAVHKANIMKLGDGLFLQCCQEVAAEYPEITFRSMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLVGGPGLVPGANYGHDYAVFETATRNTGKSIANRNIANPTATLLAACMMLDHLRLHSHASSIRQAVLASLDDPRTHTPDIGGQGTTSGAVQSIISHLSHT
SIO_010081: IDH3G
subclass of: SO_0000673
so part of: IDH3G
location: join(559650..559712,560188..560223,560483..560494,561810..561907,562724..562836,564588..564648,566050..566182,569059..569192,572563..572665,572749..572832,573002..573064,575874..575968,577309..577369,577480..577560)
location: region:559650-577560:1
so has part: feature:559650-559712:1:exon
so has part: feature:560188-560223:1:exon
so has part: feature:560483-560494:1:exon
so has part: feature:561810-561907:1:exon
so has part: feature:562724-562836:1:exon
so has part: feature:564588-564648:1:exon
so has part: feature:566050-566182:1:exon
so has part: feature:569059-569192:1:exon
so has part: feature:572563-572665:1:exon
so has part: feature:572749-572832:1:exon
so has part: feature:573002-573064:1:exon
so has part: feature:575874-575968:1:exon
so has part: feature:577309-577369:1:exon
so has part: feature:577480-577560:1:exon

XP_032939428.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:559650-559712:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:560188-560223:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:560483-560494:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:561810-561907:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:562724-562836:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:564588-564648:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:566050-566182:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:569059-569192:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:572563-572665:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:572749-572832:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:573002-573064:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:575874-575968:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:577309-577369:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:577480-577560:1:exon

LOC117009304
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009304
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(577514..580016)
location: region:577514-580016:-1
so has part: feature:577514-580016:-1:exon
subclass of: SO_0000011

117009304
type: Gene
SIO_000068: ncbigene

position:577514:-1
position: 577514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580016:-1
position: 580016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577514-580016:-1:exon

LOC117009304
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117009304
product: uncharacterized LOC117009304, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004420456.2
SIO_010081: LOC117009304
subclass of: SO_0000673
so part of: LOC117009304
location: complement(join(577514..577556,577676..578346,578406..579891))
location: region:577514-579891:-1
so has part: feature:578406-579891:-1:exon
so has part: feature:577676-578346:-1:exon
so has part: feature:577514-577556:-1:exon

position:579891:-1
position: 579891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578406-579891:-1:exon

position:578406:-1
position: 578406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:577676-578346:-1:exon

position:577676:-1
position: 577676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578346:-1
position: 578346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:577514-577556:-1:exon

position:577556:-1
position: 577556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009304
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117009304
product: uncharacterized LOC117009304, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004420457.2
SIO_010081: LOC117009304
subclass of: SO_0000673
so part of: LOC117009304
location: complement(join(577579..577646,577706..578346,578406..579892))
location: region:577579-579892:-1
so has part: feature:578406-579892:-1:exon
so has part: feature:577706-578346:-1:exon
so has part: feature:577579-577646:-1:exon

position:577579:-1
position: 577579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579892:-1
position: 579892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578406-579892:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:577706-578346:-1:exon

position:577706:-1
position: 577706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:577579-577646:-1:exon

position:577646:-1
position: 577646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009304
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117009304
product: uncharacterized LOC117009304, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004420458.2
SIO_010081: LOC117009304
subclass of: SO_0000673
so part of: LOC117009304
location: complement(join(577589..577675,577706..578346,578406..579892))
location: region:577589-579892:-1
so has part: feature:578406-579892:-1:exon
so has part: feature:577706-578346:-1:exon
so has part: feature:577589-577675:-1:exon

position:577589:-1
position: 577589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578406-579892:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:577706-578346:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:577589-577675:-1:exon

position:577675:-1
position: 577675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009304
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117009304
product: uncharacterized LOC117009304, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004420455.2
SIO_010081: LOC117009304
subclass of: SO_0000673
so part of: LOC117009304
location: complement(join(577832..577916,577948..578346,578406..579901))
location: region:577832-579901:-1
so has part: feature:578406-579901:-1:exon
so has part: feature:577948-578346:-1:exon
so has part: feature:577832-577916:-1:exon

position:577832:-1
position: 577832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579901:-1
position: 579901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578406-579901:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:577948-578346:-1:exon

position:577948:-1
position: 577948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:577832-577916:-1:exon

position:577916:-1
position: 577916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009304
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117009304
product: uncharacterized LOC117009304, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_006163135.1
SIO_010081: LOC117009304
subclass of: SO_0000673
so part of: LOC117009304
location: complement(join(577964..578179,578220..578346,578406..580016))
location: region:577964-580016:-1
so has part: feature:578406-580016:-1:exon
so has part: feature:578220-578346:-1:exon
so has part: feature:577964-578179:-1:exon

position:577964:-1
position: 577964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578406-580016:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:578220-578346:-1:exon

position:578220:-1
position: 578220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:577964-578179:-1:exon

position:578179:-1
position: 578179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009304
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117009304
product: uncharacterized LOC117009304, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004420454.2
SIO_010081: LOC117009304
subclass of: SO_0000673
so part of: LOC117009304
location: complement(join(577964..578346,578406..578756,578878..579903))
location: region:577964-579903:-1
so has part: feature:578878-579903:-1:exon
so has part: feature:578406-578756:-1:exon
so has part: feature:577964-578346:-1:exon

position:579903:-1
position: 579903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578878-579903:-1:exon

position:578878:-1
position: 578878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:578406-578756:-1:exon

position:578756:-1
position: 578756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:577964-578346:-1:exon

SRPK3
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: SRPK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(580690..597209)
location: region:580690-597209:-1
so has part: feature:580690-597209:-1:exon
subclass of: SO_0000010

117009218
type: Gene
SIO_000068: ncbigene

position:580690:-1
position: 580690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597209:-1
position: 597209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580690-597209:-1:exon

SRPK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SRPK3
product: SRSF protein kinase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 22 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033083458.1
SIO_010081: SRPK3
subclass of: SO_0000673
so part of: SRPK3
location: complement(join(580690..580941,581501..581593,581981..582050,583142..583249,584235..584335,586441..586686,588997..589132,591191..591216,592791..592950,594144..594250,594348..594435,594519..594606,594689..594797,594889..595008,595499..595616,595847..595904,597205..597209))
location: region:580690-597209:-1
so has part: feature:597205-597209:-1:exon
so has part: feature:595847-595904:-1:exon
so has part: feature:595499-595616:-1:exon
so has part: feature:594889-595008:-1:exon
so has part: feature:594689-594797:-1:exon
so has part: feature:594519-594606:-1:exon
so has part: feature:594348-594435:-1:exon
so has part: feature:594144-594250:-1:exon
so has part: feature:592791-592950:-1:exon
so has part: feature:591191-591216:-1:exon
so has part: feature:588997-589132:-1:exon
so has part: feature:586441-586686:-1:exon
so has part: feature:584235-584335:-1:exon
so has part: feature:583142-583249:-1:exon
so has part: feature:581981-582050:-1:exon
so has part: feature:581501-581593:-1:exon
so has part: feature:580690-580941:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:597205-597209:-1:exon

position:597205:-1
position: 597205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:595847-595904:-1:exon

position:595847:-1
position: 595847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:595904:-1
position: 595904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:595499-595616:-1:exon

position:595499:-1
position: 595499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:595616:-1
position: 595616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:594889-595008:-1:exon

position:594889:-1
position: 594889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:595008:-1
position: 595008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:594689-594797:-1:exon

position:594689:-1
position: 594689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594797:-1
position: 594797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:594519-594606:-1:exon

position:594519:-1
position: 594519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594606:-1
position: 594606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:594348-594435:-1:exon

position:594348:-1
position: 594348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594435:-1
position: 594435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:594144-594250:-1:exon

position:594144:-1
position: 594144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594250:-1
position: 594250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:592791-592950:-1:exon

position:592791:-1
position: 592791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592950:-1
position: 592950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:591191-591216:-1:exon

position:591191:-1
position: 591191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591216:-1
position: 591216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:588997-589132:-1:exon

position:588997:-1
position: 588997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589132:-1
position: 589132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:586441-586686:-1:exon

position:586441:-1
position: 586441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586686:-1
position: 586686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:584235-584335:-1:exon

position:584235:-1
position: 584235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584335:-1
position: 584335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:583142-583249:-1:exon

position:583142:-1
position: 583142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583249:-1
position: 583249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:581981-582050:-1:exon

position:581981:-1
position: 581981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582050:-1
position: 582050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:581501-581593:-1:exon

position:581501:-1
position: 581501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581593:-1
position: 581593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:580690-580941:-1:exon

position:580941:-1
position: 580941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SRPK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SRPK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SRSF protein kinase 3
translation: MTSRQEKEKAQKGQKTEGTPKLGGASGSSQRSLGTIPGSSAALGPPRDHPPIWGRPPKGPGPPPPPSEEPPAPLPAPPSLPEALLGSDEGEQEDPRDYCKGGYYPVRIGDLFHGRYHVVRKLGWGHFSTVWLCWDLRRKRFVALKVVKSAPQYTETALDEIKLLKCVRDSDPSDPNREHIVQLIDDFKISGVNGVHVCMVLEVLGHQLLRWIIKSNYQGLPLPCVKSIVRQVLEGLDYLHTKCKIIHTDIKPENVLLCVQEPFLRHLAAQAARWARGDGPPRGAVSSAPQEEPDRLSRAQRRRRRRRQRRQRQLLAQRLRDLEQLRDSAGTPGGHSDTEAPPDPPEELGGSPPSGASSSGVHTLPPGGSSDGFSGGSCASGGIPAPSRRPPSPSSASDSLFTPTSGSLLSGGSEGIPKNLGEGALPEGQENPLDPRAAPRLRIKIADLGNGCWVHKHFTEDIQTRQYRALEVLLGAGYGPPADIWSTACMAFELATGDYLFEPHSGEEYSRDEDHIAHVIELLGEIPRHVALGGRYSREFFNRKGELRHIRHLRPWGLRAVLQEKYEWPRGPAAAFARFLRPMLAFEPDRRATARQCLQHPWLRP
SIO_010081: SRPK3
subclass of: SO_0000673
so part of: SRPK3
location: complement(join(580757..580941,581501..581593,581981..582050,583142..583249,584235..584335,586441..586686,588997..589132,591191..591216,592791..592950,594144..594250,594348..594435,594519..594606,594689..594797,594889..595008,595499..595616,595847..595904,597205..597209))
location: region:580757-597209:-1
so has part: feature:597205-597209:-1:exon
so has part: feature:595847-595904:-1:exon
so has part: feature:595499-595616:-1:exon
so has part: feature:594889-595008:-1:exon
so has part: feature:594689-594797:-1:exon
so has part: feature:594519-594606:-1:exon
so has part: feature:594348-594435:-1:exon
so has part: feature:594144-594250:-1:exon
so has part: feature:592791-592950:-1:exon
so has part: feature:591191-591216:-1:exon
so has part: feature:588997-589132:-1:exon
so has part: feature:586441-586686:-1:exon
so has part: feature:584235-584335:-1:exon
so has part: feature:583142-583249:-1:exon
so has part: feature:581981-582050:-1:exon
so has part: feature:581501-581593:-1:exon
so has part: feature:580757-580941:-1:exon

XP_032939349.1
type: Protein
SIO_000068: ncbiprotein

position:580757:-1
position: 580757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597205-597209:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:595847-595904:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:595499-595616:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:594889-595008:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:594689-594797:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:594519-594606:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:594348-594435:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:594144-594250:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:592791-592950:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:591191-591216:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:588997-589132:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:586441-586686:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:584235-584335:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:583142-583249:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:581981-582050:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:581501-581593:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:580757-580941:-1:exon

OTUD5
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: OTUD5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(597615..612805)
location: region:597615-612805:-1
so has part: feature:597615-612805:-1:exon
subclass of: SO_0000010

117009404
type: Gene
SIO_000068: ncbigene

position:597615:-1
position: 597615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612805:-1
position: 612805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597615-612805:-1:exon

OTUD5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: OTUD5
product: OTU deubiquitinase 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033083650.2
SIO_010081: OTUD5
subclass of: SO_0000673
so part of: OTUD5
location: complement(join(597615..598187,600791..600905,602186..602387,605428..605613,608132..608280,609626..609782,611202..611266,611368..611458,612633..612778))
location: region:597615-612778:-1
so has part: feature:612633-612778:-1:exon
so has part: feature:611368-611458:-1:exon
so has part: feature:611202-611266:-1:exon
so has part: feature:609626-609782:-1:exon
so has part: feature:608132-608280:-1:exon
so has part: feature:605428-605613:-1:exon
so has part: feature:602186-602387:-1:exon
so has part: feature:600791-600905:-1:exon
so has part: feature:597615-598187:-1:exon

position:612778:-1
position: 612778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:612633-612778:-1:exon

position:612633:-1
position: 612633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:611368-611458:-1:exon

position:611368:-1
position: 611368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611458:-1
position: 611458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:611202-611266:-1:exon

position:611202:-1
position: 611202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611266:-1
position: 611266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:609626-609782:-1:exon

position:609626:-1
position: 609626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609782:-1
position: 609782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:608132-608280:-1:exon

position:608132:-1
position: 608132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:608280:-1
position: 608280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:605428-605613:-1:exon

position:605428:-1
position: 605428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605613:-1
position: 605613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:602186-602387:-1:exon

position:602186:-1
position: 602186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602387:-1
position: 602387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:600791-600905:-1:exon

position:600791:-1
position: 600791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600905:-1
position: 600905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:597615-598187:-1:exon

position:598187:-1
position: 598187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OTUD5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: OTUD5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: OTU domain-containing protein 5 isoform X1
translation: MGLGPGCGSPGPDEAGGGYNSEDEYEAGRVEMDPATAEQEHRFEKALREKKGFIIKRMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKSTCHGNHIEMQAMAEMYNRPVEVYQYGTEPINTFHGIQHNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGLAEQSLMKSAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQPRKASATCSSATAAAASGLEEWSGRSPRPRSAAPSPEHPGLHPETPGPKPPSPGAPPAGKPPSPCAPGTSSQLGAGGGPGHAPAGVAVPRARVPRHHAADVPDRLRPERLGGRRDPGVGAGGVAAGVPGDHENLAPQRPRRRQKLILNPRTATPPPPQNPPQKSPQTLRNHPLKKTNKQTKKKQQTNKQRNITADPPPTHPTPPPPPKKKNQAGTCGCMAAPAGGVDFGGDKNPPLVKGGGGHSAGRRG
SIO_010081: OTUD5
subclass of: SO_0000673
so part of: OTUD5
location: complement(join(597755..598187,600791..600905,602186..602387,605428..605613,608132..608280,609626..609782,611202..611266,611368..611458,612633..612749))
location: region:597755-612749:-1
so has part: feature:612633-612749:-1:exon
so has part: feature:611368-611458:-1:exon
so has part: feature:611202-611266:-1:exon
so has part: feature:609626-609782:-1:exon
so has part: feature:608132-608280:-1:exon
so has part: feature:605428-605613:-1:exon
so has part: feature:602186-602387:-1:exon
so has part: feature:600791-600905:-1:exon
so has part: feature:597755-598187:-1:exon

XP_032939541.1
type: Protein
SIO_000068: ncbiprotein

position:597755:-1
position: 597755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612749:-1
position: 612749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:612633-612749:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:611368-611458:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:611202-611266:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:609626-609782:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:608132-608280:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:605428-605613:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:602186-602387:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:600791-600905:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:597755-598187:-1:exon

OTUD5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: OTUD5
product: OTU deubiquitinase 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 3 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033083651.1
SIO_010081: OTUD5
subclass of: SO_0000673
so part of: OTUD5
location: complement(join(597989..598187,600791..600891,602173..602387,605428..605613,608132..608280,609626..609782,611202..611266,611368..611461,612633..612805))
location: region:597989-612805:-1
so has part: feature:612633-612805:-1:exon
so has part: feature:611368-611461:-1:exon
so has part: feature:611202-611266:-1:exon
so has part: feature:609626-609782:-1:exon
so has part: feature:608132-608280:-1:exon
so has part: feature:605428-605613:-1:exon
so has part: feature:602173-602387:-1:exon
so has part: feature:600791-600891:-1:exon
so has part: feature:597989-598187:-1:exon

position:597989:-1
position: 597989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:612633-612805:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:611368-611461:-1:exon

position:611461:-1
position: 611461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:611202-611266:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:609626-609782:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:608132-608280:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:605428-605613:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:602173-602387:-1:exon

position:602173:-1
position: 602173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:600791-600891:-1:exon

position:600891:-1
position: 600891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:597989-598187:-1:exon

OTUD5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: OTUD5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: OTU domain-containing protein 5 isoform X2
translation: MGLGPGCGSPGPDEAGGGYNSEDEYEAGRVEMDPATAEQQEHRFEKALREKKGFIIKRMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKSTCHGNHIEMQAMAEMYNRPVEVYQYGTEPINTFHGIQHNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGLAEQSLMKSAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQPRKASATCSSATAAAASGLEEWSGRSPRPRSAAPSPEHPGLHPETPGPKPPSPGAPPAGKPPSPCAPGGSGGWGQGGGRATPPLVSLYPALECRAIMQQMSPTAFGLNDWEDDEILASVLAVSQQEYLETMKTSRHRDPAADKS
SIO_010081: OTUD5
subclass of: SO_0000673
so part of: OTUD5
location: complement(join(598069..598187,600791..600891,602173..602387,605428..605613,608132..608280,609626..609782,611202..611266,611368..611461,612633..612749))
location: region:598069-612749:-1
so has part: feature:612633-612749:-1:exon
so has part: feature:611368-611461:-1:exon
so has part: feature:611202-611266:-1:exon
so has part: feature:609626-609782:-1:exon
so has part: feature:608132-608280:-1:exon
so has part: feature:605428-605613:-1:exon
so has part: feature:602173-602387:-1:exon
so has part: feature:600791-600891:-1:exon
so has part: feature:598069-598187:-1:exon

XP_032939542.1
type: Protein
SIO_000068: ncbiprotein

position:598069:-1
position: 598069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:612633-612749:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:611368-611461:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:611202-611266:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:609626-609782:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:608132-608280:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:605428-605613:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:602173-602387:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:600791-600891:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:598069-598187:-1:exon

LOC117009289
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009289
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(614273..616992)
location: region:614273-616992:-1
so has part: feature:614273-616992:-1:exon
subclass of: SO_0000010

117009289
type: Gene
SIO_000068: ncbigene

position:614273:-1
position: 614273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616992:-1
position: 616992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614273-616992:-1:exon

LOC117009289
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009289
product: EBP cholestenol delta-isomerase
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083522.1
SIO_010081: LOC117009289
subclass of: SO_0000673
so part of: LOC117009289
location: complement(join(614273..614771,615399..615529,615623..615659,616406..616745,616957..616992))
location: region:614273-616992:-1
so has part: feature:616957-616992:-1:exon
so has part: feature:616406-616745:-1:exon
so has part: feature:615623-615659:-1:exon
so has part: feature:615399-615529:-1:exon
so has part: feature:614273-614771:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:616957-616992:-1:exon

position:616957:-1
position: 616957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:616406-616745:-1:exon

position:616406:-1
position: 616406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616745:-1
position: 616745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:615623-615659:-1:exon

position:615623:-1
position: 615623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615659:-1
position: 615659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:615399-615529:-1:exon

position:615399:-1
position: 615399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615529:-1
position: 615529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:614273-614771:-1:exon

position:614771:-1
position: 614771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009289
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009289
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 3-beta-hydroxysteroid-Delta(8), Delta(7)-isomerase
translation: METSAHPYWPRTLALPGYVAGARPGWQCAGAVAVAAAALLALGWALGGAGGGAKGGAKGGAKRSPARRLVLGWFLLCTGIHGVLEGYFSLRHRELPADTGLLAEVWKEYAKADSRYMTSDDFTVAMETVTAWAWGPLSFLTFLALLRHHPARYVLQLIVSLGQLYGDVLYFATEALAGWTHSDPHPLYFWVYFVGLNGIWVLVPALLILDAWHQLATAQRGHDRPRHKAH
SIO_010081: LOC117009289
subclass of: SO_0000673
so part of: LOC117009289
location: complement(join(614563..614771,615399..615529,615623..615659,616406..616721))
location: region:614563-616721:-1
so has part: feature:616406-616721:-1:exon
so has part: feature:615623-615659:-1:exon
so has part: feature:615399-615529:-1:exon
so has part: feature:614563-614771:-1:exon

XP_032939413.1
type: Protein
SIO_000068: ncbiprotein

position:614563:-1
position: 614563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616721:-1
position: 616721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:616406-616721:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615623-615659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:615399-615529:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:614563-614771:-1:exon

CCDC120
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: CCDC120
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(617759..637169)
location: region:617759-637169:-1
so has part: feature:617759-637169:-1:exon
subclass of: SO_0000010

117009219
type: Gene
SIO_000068: ncbigene

position:617759:-1
position: 617759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:637169:-1
position: 637169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:617759-637169:-1:exon

CCDC120
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CCDC120
product: coiled-coil domain containing 120
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033083459.2
SIO_010081: CCDC120
subclass of: SO_0000673
so part of: CCDC120
location: complement(join(617759..618003,619549..620019,622021..622122,625993..626131,627353..627394,628519..628886,630226..630309,630855..630962,633036..633142,635339..635404,636933..637169))
location: region:617759-637169:-1
so has part: feature:636933-637169:-1:exon
so has part: feature:635339-635404:-1:exon
so has part: feature:633036-633142:-1:exon
so has part: feature:630855-630962:-1:exon
so has part: feature:630226-630309:-1:exon
so has part: feature:628519-628886:-1:exon
so has part: feature:627353-627394:-1:exon
so has part: feature:625993-626131:-1:exon
so has part: feature:622021-622122:-1:exon
so has part: feature:619549-620019:-1:exon
so has part: feature:617759-618003:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:636933-637169:-1:exon

position:636933:-1
position: 636933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:635339-635404:-1:exon

position:635339:-1
position: 635339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:635404:-1
position: 635404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:633036-633142:-1:exon

position:633036:-1
position: 633036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:633142:-1
position: 633142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:630855-630962:-1:exon

position:630855:-1
position: 630855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:630962:-1
position: 630962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:630226-630309:-1:exon

position:630226:-1
position: 630226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:630309:-1
position: 630309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:628519-628886:-1:exon

position:628519:-1
position: 628519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:628886:-1
position: 628886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:627353-627394:-1:exon

position:627353:-1
position: 627353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:627394:-1
position: 627394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:625993-626131:-1:exon

position:625993:-1
position: 625993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626131:-1
position: 626131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:622021-622122:-1:exon

position:622021:-1
position: 622021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622122:-1
position: 622122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:619549-620019:-1:exon

position:619549:-1
position: 619549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620019:-1
position: 620019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:617759-618003:-1:exon

position:618003:-1
position: 618003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCDC120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CCDC120
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: coiled-coil domain-containing protein 120
translation: MEVRGHILPPGTYSPAGGPAGRLQELRERQRGLRQALGLRLRELRRLCLQEAELTGKLPPEYPLEPGERPQPPPRRRSGGPPRGPPPEWPLYPAGGSRPPVCHMGTPTSCGSPHALVSRARREAQAQAQVQAQVLEAARPFPISPFSPISLHIPHISPRFPPISLSFPALTPYFPSDEQGPARGAGPGAGQAQVLEAARRLAAVPGLPPEQRRRRQRLQAEAAQRLRQLRAQLGAPGHDENGSLCDLPALENGALPPPKPPPGRPSPPRGGSSPERRPGPPWTPEVAPGRRSSLASPASPARTLPRSASSFEGRSVPATPVLGRSPRGSGPGRPEAPGLPPRPWSGSQDSQLGGPPAPCPPPPGAPRTRRSNSSEALIDWGGGGGAAGPSETPPESSRARGVLGVAPGGAGVAMLGPEQRRSQKWLALEGLRDWYLRHTGTGTGTGTGTGTGTGTPPAARPGHTWAPPPRRRDPPGLPHSLSYAGALAPRASGDTPGATPPPPLEPQPPGTLV
SIO_010081: CCDC120
subclass of: SO_0000673
so part of: CCDC120
location: complement(join(617931..618003,619549..620019,622021..622122,625993..626131,627353..627394,628519..628886,630226..630309,630855..630962,633036..633142,635339..635387))
location: region:617931-635387:-1
so has part: feature:635339-635387:-1:exon
so has part: feature:633036-633142:-1:exon
so has part: feature:630855-630962:-1:exon
so has part: feature:630226-630309:-1:exon
so has part: feature:628519-628886:-1:exon
so has part: feature:627353-627394:-1:exon
so has part: feature:625993-626131:-1:exon
so has part: feature:622021-622122:-1:exon
so has part: feature:619549-620019:-1:exon
so has part: feature:617931-618003:-1:exon

XP_032939350.2
type: Protein
SIO_000068: ncbiprotein

position:617931:-1
position: 617931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:635387:-1
position: 635387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:635339-635387:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:633036-633142:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:630855-630962:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:630226-630309:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:628519-628886:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:627353-627394:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:625993-626131:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:622021-622122:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:619549-620019:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:617931-618003:-1:exon

LOC117009207
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009207
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 637997..651429
location: region:637997-651429:1
so has part: feature:637997-651429:1:exon
subclass of: SO_0000010

117009207
type: Gene
SIO_000068: ncbigene

position:637997:1
position: 637997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651429:1
position: 651429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:637997-651429:1:exon

LOC117009207
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009207
product: transcription factor E3-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
transcript id: XM_033083448.2
SIO_010081: LOC117009207
subclass of: SO_0000673
so part of: LOC117009207
location: join(637997..638124,639805..640002,641741..641957,643082..643273,644738..644833,645740..645839,646498..646554,647094..647169,649164..649311,650542..651429)
location: region:637997-651429:1
so has part: feature:637997-638124:1:exon
so has part: feature:639805-640002:1:exon
so has part: feature:641741-641957:1:exon
so has part: feature:643082-643273:1:exon
so has part: feature:644738-644833:1:exon
so has part: feature:645740-645839:1:exon
so has part: feature:646498-646554:1:exon
so has part: feature:647094-647169:1:exon
so has part: feature:649164-649311:1:exon
so has part: feature:650542-651429:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:637997-638124:1:exon

position:638124:1
position: 638124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:639805-640002:1:exon

position:639805:1
position: 639805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640002:1
position: 640002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:641741-641957:1:exon

position:641741:1
position: 641741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:641957:1
position: 641957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:643082-643273:1:exon

position:643082:1
position: 643082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643273:1
position: 643273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:644738-644833:1:exon

position:644738:1
position: 644738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644833:1
position: 644833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:645740-645839:1:exon

position:645740:1
position: 645740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645839:1
position: 645839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:646498-646554:1:exon

position:646498:1
position: 646498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646554:1
position: 646554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:647094-647169:1:exon

position:647094:1
position: 647094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647169:1
position: 647169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:649164-649311:1:exon

position:649164:1
position: 649164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:649311:1
position: 649311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:650542-651429:1:exon

position:650542:1
position: 650542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117009207
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009207
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: transcription factor E3-like
translation: MSRGEAEGVPATPGPPPGPPRGPPTVFVLLEGPSTPESLRLLSLSSLLPESGIVADIEWDPPGGGGGTPGDPPSDPQGDPSGDPHPGDPPGDPPGPFYSLKSQPLPPPSSGAPPAAPSSRVLLRQQLMRAQAQEQEQRERRGGGAPGTPPGPPTPGPSPAIAVGAPPGARAPPHVPPEVLKVQTHLENPTRYHLRAAQRQQLRQYLSHARGRGGEAGSPPGPPPSTNPPEPPLSPPPALLHHEKEIDDVIDEIISLESSYDELLSFGPAEPLPLPSTLPAPGPLLEVFSPPQGGSSSCPAELPRVKAELSETEAKALLKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSSDPEMRWNKGTILKASVDYIRKLQKETQRARELELQQQRLEQQNRSLQLRVQELELQAQIHGLPLTPPMAEGGSEEPSGGXPLPPHPRAVPAGAAPGAGAAAGAGGARGDPRGHPDGRGGGAVPARPPRGPAGLAGPLAGLQPPQQPQHGGRALSAPPGSGGTFGDPPHL
SIO_010081: LOC117009207
subclass of: SO_0000673
so part of: LOC117009207
location: join(637997..638124,639805..640002,641741..641957,643082..643273,644738..644833,645740..645839,646498..646554,647094..647169,649164..649311,650542..650897)
location: region:637997-650897:1
so has part: feature:637997-638124:1:exon
so has part: feature:639805-640002:1:exon
so has part: feature:641741-641957:1:exon
so has part: feature:643082-643273:1:exon
so has part: feature:644738-644833:1:exon
so has part: feature:645740-645839:1:exon
so has part: feature:646498-646554:1:exon
so has part: feature:647094-647169:1:exon
so has part: feature:649164-649311:1:exon
so has part: feature:650542-650897:1:exon

XP_032939339.2
type: Protein
SIO_000068: ncbiprotein

position:650897:1
position: 650897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:637997-638124:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:639805-640002:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:641741-641957:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:643082-643273:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:644738-644833:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:645740-645839:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:646498-646554:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:647094-647169:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:649164-649311:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:650542-650897:1:exon

LOC117009405
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009405
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(652563..666536)
location: region:652563-666536:-1
so has part: feature:652563-666536:-1:exon
subclass of: SO_0000010

117009405
type: Gene
SIO_000068: ncbigene

position:652563:-1
position: 652563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666536:-1
position: 666536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:652563-666536:-1:exon

LOC117009405
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009405
product: RNA-binding protein 3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_033083652.1
SIO_010081: LOC117009405
subclass of: SO_0000673
so part of: LOC117009405
location: complement(join(652563..652602,655175..655236,656911..656992,658307..658412,660124..660230,665733..665902,666436..666536))
location: region:652563-666536:-1
so has part: feature:666436-666536:-1:exon
so has part: feature:665733-665902:-1:exon
so has part: feature:660124-660230:-1:exon
so has part: feature:658307-658412:-1:exon
so has part: feature:656911-656992:-1:exon
so has part: feature:655175-655236:-1:exon
so has part: feature:652563-652602:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:666436-666536:-1:exon

position:666436:-1
position: 666436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:665733-665902:-1:exon

position:665733:-1
position: 665733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665902:-1
position: 665902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:660124-660230:-1:exon

position:660124:-1
position: 660124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660230:-1
position: 660230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:658307-658412:-1:exon

position:658307:-1
position: 658307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658412:-1
position: 658412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:656911-656992:-1:exon

position:656911:-1
position: 656911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:656992:-1
position: 656992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:655175-655236:-1:exon

position:655175:-1
position: 655175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:655236:-1
position: 655236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:652563-652602:-1:exon

position:652602:-1
position: 652602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009405
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009405
product: RNA-binding protein 3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_033083653.2
SIO_010081: LOC117009405
subclass of: SO_0000673
so part of: LOC117009405
location: complement(join(654965..655236,656911..656992,658307..658412,660124..660230,665733..665902,666436..666536))
location: region:654965-666536:-1
so has part: feature:666436-666536:-1:exon
so has part: feature:665733-665902:-1:exon
so has part: feature:660124-660230:-1:exon
so has part: feature:658307-658412:-1:exon
so has part: feature:656911-656992:-1:exon
so has part: feature:654965-655236:-1:exon

position:654965:-1
position: 654965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:666436-666536:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:665733-665902:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:660124-660230:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:658307-658412:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:656911-656992:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:654965-655236:-1:exon

LOC117009405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009405
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 3-like
translation: MAAEEGKLFVGGLNYDTDEQGLEQHFSSFGPISEVVVVKDRETQRSRGFGFVTFANPEHASDAMQAMNGECLDGRQIRVDHAGKSPRGARGGYGGNRGRGRGYGRGGGDRGYGGRYEGRSGGGYGGNRDYGGRQGGYGERFPSASYRDNYDN
SIO_010081: LOC117009405
subclass of: SO_0000673
so part of: LOC117009405
location: complement(join(655176..655236,656911..656992,658307..658412,660124..660230,665733..665835))
location: region:655176-665835:-1
so has part: feature:665733-665835:-1:exon
so has part: feature:660124-660230:-1:exon
so has part: feature:658307-658412:-1:exon
so has part: feature:656911-656992:-1:exon
so has part: feature:655176-655236:-1:exon

XP_032939543.1
type: Protein
SIO_000068: ncbiprotein

position:655176:-1
position: 655176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665835:-1
position: 665835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:665733-665835:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:660124-660230:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:658307-658412:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:656911-656992:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:655176-655236:-1:exon

LOC117009405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009405
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 3-like
translation: MAAEEGKLFVGGLNYDTDEQGLEQHFSSFGPISEVVVVKDRETQRSRGFGFVTFANPEHASDAMQAMNGECLDGRQIRVDHAGKSPRGARGGYGGNRGRGRGYGRGGGDRGYGGRYEGRSGGGYGGNRDYGGRQGGYGERFPSASYRDNYDN
SIO_010081: LOC117009405
subclass of: SO_0000673
so part of: LOC117009405
location: complement(join(655176..655236,656911..656992,658307..658412,660124..660230,665733..665835))
location: region:655176-665835:-1
so has part: feature:665733-665835:-1:exon
so has part: feature:660124-660230:-1:exon
so has part: feature:658307-658412:-1:exon
so has part: feature:656911-656992:-1:exon
so has part: feature:655176-655236:-1:exon

XP_032939544.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:665733-665835:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:660124-660230:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:658307-658412:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:656911-656992:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:655176-655236:-1:exon

CDK16
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: CDK16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(671074..702313)
location: region:671074-702313:-1
so has part: feature:671074-702313:-1:exon
subclass of: SO_0000010

117009399
type: Gene
SIO_000068: ncbigene

position:671074:-1
position: 671074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702313:-1
position: 702313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:671074-702313:-1:exon

CDK16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CDK16
product: cyclin dependent kinase 16
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033083645.1
SIO_010081: CDK16
subclass of: SO_0000673
so part of: CDK16
location: complement(join(671074..671150,671941..672018,672850..672940,673167..673209,675193..675298,675969..676066,678981..679100,683402..683525,685990..686052,688394..688488,689976..690090,691072..691128,694573..694674,695969..696092,700128..700245,702234..702313))
location: region:671074-702313:-1
so has part: feature:702234-702313:-1:exon
so has part: feature:700128-700245:-1:exon
so has part: feature:695969-696092:-1:exon
so has part: feature:694573-694674:-1:exon
so has part: feature:691072-691128:-1:exon
so has part: feature:689976-690090:-1:exon
so has part: feature:688394-688488:-1:exon
so has part: feature:685990-686052:-1:exon
so has part: feature:683402-683525:-1:exon
so has part: feature:678981-679100:-1:exon
so has part: feature:675969-676066:-1:exon
so has part: feature:675193-675298:-1:exon
so has part: feature:673167-673209:-1:exon
so has part: feature:672850-672940:-1:exon
so has part: feature:671941-672018:-1:exon
so has part: feature:671074-671150:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:702234-702313:-1:exon

position:702234:-1
position: 702234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:700128-700245:-1:exon

position:700128:-1
position: 700128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700245:-1
position: 700245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:695969-696092:-1:exon

position:695969:-1
position: 695969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:696092:-1
position: 696092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:694573-694674:-1:exon

position:694573:-1
position: 694573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694674:-1
position: 694674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:691072-691128:-1:exon

position:691072:-1
position: 691072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:691128:-1
position: 691128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:689976-690090:-1:exon

position:689976:-1
position: 689976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690090:-1
position: 690090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:688394-688488:-1:exon

position:688394:-1
position: 688394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688488:-1
position: 688488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:685990-686052:-1:exon

position:685990:-1
position: 685990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686052:-1
position: 686052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:683402-683525:-1:exon

position:683402:-1
position: 683402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683525:-1
position: 683525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:678981-679100:-1:exon

position:678981:-1
position: 678981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679100:-1
position: 679100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:675969-676066:-1:exon

position:675969:-1
position: 675969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:676066:-1
position: 676066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:675193-675298:-1:exon

position:675193:-1
position: 675193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:675298:-1
position: 675298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:673167-673209:-1:exon

position:673167:-1
position: 673167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673209:-1
position: 673209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:672850-672940:-1:exon

position:672850:-1
position: 672850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:672940:-1
position: 672940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:671941-672018:-1:exon

position:671941:-1
position: 671941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:672018:-1
position: 672018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:671074-671150:-1:exon

position:671150:-1
position: 671150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDK16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CDK16
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: cyclin-dependent kinase 16
translation: MDRMKKIKRQLSMTLRGGRAPDKGLGDPRDGPGSDSEAGGDEARMGSDGESDPPXGTSSEEVASPVRLRQHPRHSACEDVTKRLSLPADTRLPEGGLGLPGPLSRRLRRVSLSEIGFGKLETYVKLDKLGEGTYATVYKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLRDLKHANVVTLHDIVHTPQCLTLVFEYLDRDLKQYLDDCGNVISMHNVRLFLFQLLRGLAFCHRHKVLHRDLKPQNLLLSRRGDLKLADFGLARAKSIPTKTFSSEVVTLWYXPPDILLGSTEYSTQIDMWGVGCIFSEMVTGRPLFPGATVEEQLHFIFRLLGTPTEESWPGIGANAEFRAHKYPRYPGEGLRQHAPRLDQDGADLLGQLLQFEGRRRLPAAEAMGHPFFSCLGPRVSALPDTTSIFALKEIQLQKEPGLRSAPLPPTGSSAFRVLDTEF
SIO_010081: CDK16
subclass of: SO_0000673
so part of: CDK16
location: complement(join(671113..671150,671941..672018,672850..672940,673167..673209,675193..675298,675969..676066,678981..679100,683402..683525,685990..686052,688394..688488,689976..690090,691072..691128,694573..694674,695969..696092,700128..700236))
location: region:671113-700236:-1
so has part: feature:700128-700236:-1:exon
so has part: feature:695969-696092:-1:exon
so has part: feature:694573-694674:-1:exon
so has part: feature:691072-691128:-1:exon
so has part: feature:689976-690090:-1:exon
so has part: feature:688394-688488:-1:exon
so has part: feature:685990-686052:-1:exon
so has part: feature:683402-683525:-1:exon
so has part: feature:678981-679100:-1:exon
so has part: feature:675969-676066:-1:exon
so has part: feature:675193-675298:-1:exon
so has part: feature:673167-673209:-1:exon
so has part: feature:672850-672940:-1:exon
so has part: feature:671941-672018:-1:exon
so has part: feature:671113-671150:-1:exon

XP_032939536.1
type: Protein
SIO_000068: ncbiprotein

position:671113:-1
position: 671113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700236:-1
position: 700236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:700128-700236:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:695969-696092:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:694573-694674:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:691072-691128:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:689976-690090:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:688394-688488:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:685990-686052:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:683402-683525:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:678981-679100:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:675969-676066:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:675193-675298:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:673167-673209:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:672850-672940:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:671941-672018:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:671113-671150:-1:exon

UXT
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: UXT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(703545..706177)
location: region:703545-706177:-1
so has part: feature:703545-706177:-1:exon
subclass of: SO_0000010

117009294
type: Gene
SIO_000068: ncbigene

position:703545:-1
position: 703545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:706177:-1
position: 706177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:703545-706177:-1:exon

UXT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: UXT
product: ubiquitously expressed prefoldin like chaperone, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083527.2
SIO_010081: UXT
subclass of: SO_0000673
so part of: UXT
location: complement(join(703545..703639,704357..704464,704757..704821,705673..705754,705836..706177))
location: region:703545-706177:-1
so has part: feature:705836-706177:-1:exon
so has part: feature:705673-705754:-1:exon
so has part: feature:704757-704821:-1:exon
so has part: feature:704357-704464:-1:exon
so has part: feature:703545-703639:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:705836-706177:-1:exon

position:705836:-1
position: 705836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:705673-705754:-1:exon

position:705673:-1
position: 705673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705754:-1
position: 705754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:704757-704821:-1:exon

position:704757:-1
position: 704757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704821:-1
position: 704821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:704357-704464:-1:exon

position:704357:-1
position: 704357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704464:-1
position: 704464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:703545-703639:-1:exon

position:703639:-1
position: 703639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UXT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: UXT
product: ubiquitously expressed prefoldin like chaperone, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083526.2
SIO_010081: UXT
subclass of: SO_0000673
so part of: UXT
location: complement(join(703545..703639,703713..703776,704357..704464,704757..704821,705673..705754,705836..706169))
location: region:703545-706169:-1
so has part: feature:705836-706169:-1:exon
so has part: feature:705673-705754:-1:exon
so has part: feature:704757-704821:-1:exon
so has part: feature:704357-704464:-1:exon
so has part: feature:703713-703776:-1:exon
so has part: feature:703545-703639:-1:exon

position:706169:-1
position: 706169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:705836-706169:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:705673-705754:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:704757-704821:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:704357-704464:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703713-703776:-1:exon

position:703713:-1
position: 703713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703776:-1
position: 703776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:703545-703639:-1:exon

UXT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: UXT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein UXT isoform X2
translation: MAAAAEKAQRYEAFVSDVLQRDLRRVQEQREAVFEQQAQVLQLRSALARLQDAAGPLHTQVDLGCNFFVNAEVPDPQRVFVALGFGFFAELTLPEALRHLERRSSLLQRACGSCRGCRTPPTPEGPAHLE
SIO_010081: UXT
subclass of: SO_0000673
so part of: UXT
location: complement(join(703573..703639,704357..704464,704757..704821,705673..705754,705836..705906))
location: region:703573-705906:-1
so has part: feature:705836-705906:-1:exon
so has part: feature:705673-705754:-1:exon
so has part: feature:704757-704821:-1:exon
so has part: feature:704357-704464:-1:exon
so has part: feature:703573-703639:-1:exon

XP_032939418.1
type: Protein
SIO_000068: ncbiprotein

position:703573:-1
position: 703573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705906:-1
position: 705906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:705836-705906:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:705673-705754:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:704757-704821:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:704357-704464:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703573-703639:-1:exon

UXT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: UXT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein UXT isoform X1
translation: MAAAAEKAQRYEAFVSDVLQRDLRRVQEQREAVFEQQAQVLQLRSALARLQDAAGPLHTQVDLGCNFFVNAEVPDPQRVFVALGFGFFAELTLPEALRHLERRSSLLQRLSDSLTRDGAKIRAHIRLVLEGLRELQGLQDPPDT
SIO_010081: UXT
subclass of: SO_0000673
so part of: UXT
location: complement(join(703595..703639,703713..703776,704357..704464,704757..704821,705673..705754,705836..705906))
location: region:703595-705906:-1
so has part: feature:705836-705906:-1:exon
so has part: feature:705673-705754:-1:exon
so has part: feature:704757-704821:-1:exon
so has part: feature:704357-704464:-1:exon
so has part: feature:703713-703776:-1:exon
so has part: feature:703595-703639:-1:exon

XP_032939417.1
type: Protein
SIO_000068: ncbiprotein

position:703595:-1
position: 703595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:705836-705906:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:705673-705754:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:704757-704821:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:704357-704464:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:703713-703776:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703595-703639:-1:exon

LOC117009296
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009296
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(721651..723868)
location: region:721651-723868:-1
so has part: feature:721651-723868:-1:exon
subclass of: SO_0000010

117009296
type: Gene
SIO_000068: ncbigene

position:721651:-1
position: 721651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723868:-1
position: 723868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:721651-723868:-1:exon

LOC117009296
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009296
product: properdin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033083529.1
SIO_010081: LOC117009296
subclass of: SO_0000673
so part of: LOC117009296
location: complement(join(721651..721702,722189..722340,723765..723868))
location: region:721651-723868:-1
so has part: feature:723765-723868:-1:exon
so has part: feature:722189-722340:-1:exon
so has part: feature:721651-721702:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:723765-723868:-1:exon

position:723765:-1
position: 723765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:722189-722340:-1:exon

position:722189:-1
position: 722189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722340:-1
position: 722340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:721651-721702:-1:exon

position:721702:-1
position: 721702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009296
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009296
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: properdin-like
translation: MVGLESLGLCTPPCGPSPSRSRSRECQPVLPDYPRTVPNVGSAGSSNVSFWGEARPRCEPLGGERLRLRETRPCRNVRPCPHPHEL
SIO_010081: LOC117009296
subclass of: SO_0000673
so part of: LOC117009296
location: complement(join(721695..721702,722189..722340,723765..723865))
location: region:721695-723865:-1
so has part: feature:723765-723865:-1:exon
so has part: feature:722189-722340:-1:exon
so has part: feature:721695-721702:-1:exon

XP_032939420.1
type: Protein
SIO_000068: ncbiprotein

position:721695:-1
position: 721695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723865:-1
position: 723865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:723765-723865:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:722189-722340:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:721695-721702:-1:exon

LOC117009220
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009220
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(725254..730786)
location: region:725254-730786:-1
so has part: feature:725254-730786:-1:exon
subclass of: SO_0000010

117009220
type: Gene
SIO_000068: ncbigene

position:725254:-1
position: 725254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:730786:-1
position: 730786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:725254-730786:-1:exon

LOC117009220
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009220
product: properdin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 80% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033083460.1
SIO_010081: LOC117009220
subclass of: SO_0000673
so part of: LOC117009220
location: complement(join(725254..725549,726553..726725,727025..727226,727760..727933,728989..729141,730465..730786))
location: region:725254-730786:-1
so has part: feature:730465-730786:-1:exon
so has part: feature:728989-729141:-1:exon
so has part: feature:727760-727933:-1:exon
so has part: feature:727025-727226:-1:exon
so has part: feature:726553-726725:-1:exon
so has part: feature:725254-725549:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:730465-730786:-1:exon

position:730465:-1
position: 730465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:728989-729141:-1:exon

position:728989:-1
position: 728989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:729141:-1
position: 729141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:727760-727933:-1:exon

position:727760:-1
position: 727760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727933:-1
position: 727933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:727025-727226:-1:exon

position:727025:-1
position: 727025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727226:-1
position: 727226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:726553-726725:-1:exon

position:726553:-1
position: 726553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:726725:-1
position: 726725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:725254-725549:-1:exon

position:725549:-1
position: 725549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009220
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: properdin-like
translation: MGCCPVPGSWSPWSPGVAALSPVGGGPSGATAAARPLPPLRGLLRARRQRGHATVPGTATVCPVSGAWGPWGPWVPARARAGARVRVRVRGRFGAAAAAAIPRSHRETPPGPPARGAPPTASPARAAPLPRGRCLGAWSPATPCPVTCGLGGVVLSRACDAPSPKYGGRGCEGPQTRRGLCGPRDPCPESPHWGPWGPWSPQCPCVSPCPRRVPALGSLGPWSPCRRPWGDISCRSLAGQQRRTRECAGHSAGGAACPTHGGASTIELRACYSVNNCLRESPMDTL
SIO_010081: LOC117009220
subclass of: SO_0000673
so part of: LOC117009220
location: complement(join(725254..725549,726553..726725,727025..727226,727760..727933,728989..729004))
location: region:725254-729004:-1
so has part: feature:728989-729004:-1:exon
so has part: feature:727760-727933:-1:exon
so has part: feature:727025-727226:-1:exon
so has part: feature:726553-726725:-1:exon
so has part: feature:725254-725549:-1:exon

XP_032939351.1
type: Protein
SIO_000068: ncbiprotein

position:729004:-1
position: 729004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:728989-729004:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:727760-727933:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:727025-727226:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:726553-726725:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:725254-725549:-1:exon

LOC117009221
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009221
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(729006..797281)
location: region:729006-797281:-1
so has part: feature:729006-797281:-1:exon
subclass of: SO_0000010

117009221
type: Gene
SIO_000068: ncbigene

position:729006:-1
position: 729006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:797281:-1
position: 797281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:729006-797281:-1:exon

LOC117009221
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009221
product: RNA-binding protein 10-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033083461.2
SIO_010081: LOC117009221
subclass of: SO_0000673
so part of: LOC117009221
location: complement(join(729006..729210,730465..730624,731901..732111,733789..733885,736564..736667,740715..740783,742554..742592,743764..743908,752425..752525,754013..754106,754654..754808,755506..755707,759024..759123,759424..759521,760965..761125,764127..764285,766547..766607,770751..770837,775050..775123,779588..779657,780958..781137,794520..794676,796984..797281))
location: region:729006-797281:-1
so has part: feature:796984-797281:-1:exon
so has part: feature:794520-794676:-1:exon
so has part: feature:780958-781137:-1:exon
so has part: feature:779588-779657:-1:exon
so has part: feature:775050-775123:-1:exon
so has part: feature:770751-770837:-1:exon
so has part: feature:766547-766607:-1:exon
so has part: feature:764127-764285:-1:exon
so has part: feature:760965-761125:-1:exon
so has part: feature:759424-759521:-1:exon
so has part: feature:759024-759123:-1:exon
so has part: feature:755506-755707:-1:exon
so has part: feature:754654-754808:-1:exon
so has part: feature:754013-754106:-1:exon
so has part: feature:752425-752525:-1:exon
so has part: feature:743764-743908:-1:exon
so has part: feature:742554-742592:-1:exon
so has part: feature:740715-740783:-1:exon
so has part: feature:736564-736667:-1:exon
so has part: feature:733789-733885:-1:exon
so has part: feature:731901-732111:-1:exon
so has part: feature:730465-730624:-1:exon
so has part: feature:729006-729210:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:796984-797281:-1:exon

position:796984:-1
position: 796984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:794520-794676:-1:exon

position:794520:-1
position: 794520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:794676:-1
position: 794676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:780958-781137:-1:exon

position:780958:-1
position: 780958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:781137:-1
position: 781137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:779588-779657:-1:exon

position:779588:-1
position: 779588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:779657:-1
position: 779657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:775050-775123:-1:exon

position:775050:-1
position: 775050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775123:-1
position: 775123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:770751-770837:-1:exon

position:770751:-1
position: 770751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770837:-1
position: 770837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:766547-766607:-1:exon

position:766547:-1
position: 766547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:766607:-1
position: 766607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:764127-764285:-1:exon

position:764127:-1
position: 764127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:764285:-1
position: 764285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:760965-761125:-1:exon

position:760965:-1
position: 760965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761125:-1
position: 761125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:759424-759521:-1:exon

position:759424:-1
position: 759424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759521:-1
position: 759521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:759024-759123:-1:exon

position:759024:-1
position: 759024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759123:-1
position: 759123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:755506-755707:-1:exon

position:755506:-1
position: 755506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:755707:-1
position: 755707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:754654-754808:-1:exon

position:754654:-1
position: 754654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:754808:-1
position: 754808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:754013-754106:-1:exon

position:754013:-1
position: 754013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:754106:-1
position: 754106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:752425-752525:-1:exon

position:752425:-1
position: 752425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:752525:-1
position: 752525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:743764-743908:-1:exon

position:743764:-1
position: 743764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743908:-1
position: 743908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:742554-742592:-1:exon

position:742554:-1
position: 742554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742592:-1
position: 742592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:740715-740783:-1:exon

position:740715:-1
position: 740715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:740783:-1
position: 740783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:736564-736667:-1:exon

position:736564:-1
position: 736564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736667:-1
position: 736667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:733789-733885:-1:exon

position:733789:-1
position: 733789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:733885:-1
position: 733885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:731901-732111:-1:exon

position:731901:-1
position: 731901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:732111:-1
position: 732111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:730465-730624:-1:exon

position:730624:-1
position: 730624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:729006-729210:-1:exon

position:729210:-1
position: 729210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009221
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009221
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: RNA-binding protein 10-like
translation: MRVAQRPVAPSSSQFIPVPSLFPHFPLGLPRFLQNFHAIFPAPSQCFPVHSFPIKPSSPSVSPVAPSLTIAALTGAGAMEYERRGGRGDRTGRYGGAPPPSEDTSRSQRDHDYRDMDYRGYGGPPEGPPAAGTPPQGSYEPPEPRKREAPREAPALPFGADSDYRDQDYREGPEEEPRASTIVMLRMLPQAATENDIRAQLQAQGVQPREVRLMRNKSSGQSRGFAFVEFHHVQEAARWMEANQAGLTLLGHRVSLHYSDPKPKINEDWLCAKCGVQNFKRREKCFKCGVPKAEAEQRGPGGPRAELGPGGGGAGLLPLPQPYGANLGGPHGGSQGGSEPGDNANDTIILRNLHPQSSLESILAALAPFAALSAANVRVIKDRQTQLNRGFAFVQLSTIVEAAQLLQMLQALHPPLHIDGKSINVEFAKGSKRDVQGAGPGEGPPRASAASVASTAIAAAQWALSQAAPGSDTPWAGGEEPSSDFSGFYQSEEPFPGPGPALYGPAYLKGASAPPPGPALPGPAPTKAEGPAPGPEEPPQEPAGGGGGAAGGAGPFPSRAPPGPAPYPSPTAETPAGAAPGPPGQSYSGSLKAEPPNSAPAGTPPGPPGSDGYGQYPVPDVSQYQYDETSGFYYDPVTGLYYDPHSQVWVSPPRGLVAAYSGEXESEEEGERGAAPEEPLTDWAKLACLLCRRQFPSREALLRHQQLSGLHKQNLELQRRSHLGAPEGTERGDSEMKYRDRAAERREKQGGPEPPEPKRRKFGGAPTTPGDPEVPPREPPLGCRLLQAVGWRDGGLGRRRAEAPPGPAPGGSRGSARDPEATPTTRPRPQRDHAPHARSSSPTPRGPSPTPVLVLEFRFFNKWVKKAEFGVGAATPVWCFTRLGGGRGGGACAEPLGEEPLPLADCCLNPAYGYRPRPQSHCRSCRDPGDPGDPGVPAVTPLSPCPGGSAGAWGPWEPWSSCSVTCEEGTQRRDAAAAPGDTAGQHRVAAESV
SIO_010081: LOC117009221
subclass of: SO_0000673
so part of: LOC117009221
location: complement(join(729006..729210,730465..730624,731901..732111,733789..733885,736564..736667,740715..740783,742554..742592,743764..743908,752425..752525,754013..754106,754654..754808,755506..755707,759024..759123,759424..759521,760965..761125,764127..764285,766547..766607,770751..770837,775050..775123,779588..779657,780958..781137,794520..794676,796984..797234))
location: region:729006-797234:-1
so has part: feature:796984-797234:-1:exon
so has part: feature:794520-794676:-1:exon
so has part: feature:780958-781137:-1:exon
so has part: feature:779588-779657:-1:exon
so has part: feature:775050-775123:-1:exon
so has part: feature:770751-770837:-1:exon
so has part: feature:766547-766607:-1:exon
so has part: feature:764127-764285:-1:exon
so has part: feature:760965-761125:-1:exon
so has part: feature:759424-759521:-1:exon
so has part: feature:759024-759123:-1:exon
so has part: feature:755506-755707:-1:exon
so has part: feature:754654-754808:-1:exon
so has part: feature:754013-754106:-1:exon
so has part: feature:752425-752525:-1:exon
so has part: feature:743764-743908:-1:exon
so has part: feature:742554-742592:-1:exon
so has part: feature:740715-740783:-1:exon
so has part: feature:736564-736667:-1:exon
so has part: feature:733789-733885:-1:exon
so has part: feature:731901-732111:-1:exon
so has part: feature:730465-730624:-1:exon
so has part: feature:729006-729210:-1:exon

XP_032939352.1
type: Protein
SIO_000068: ncbiprotein

position:797234:-1
position: 797234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:796984-797234:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:794520-794676:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:780958-781137:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:779588-779657:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:775050-775123:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:770751-770837:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:766547-766607:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:764127-764285:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:760965-761125:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:759424-759521:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:759024-759123:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:755506-755707:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:754654-754808:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:754013-754106:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:752425-752525:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:743764-743908:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:742554-742592:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:740715-740783:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:736564-736667:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:733789-733885:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:731901-732111:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:730465-730624:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:729006-729210:-1:exon

NDUFB11
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: NDUFB11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 797855..799207
location: region:797855-799207:1
so has part: feature:797855-799207:1:exon
subclass of: SO_0000010

117009305
type: Gene
SIO_000068: ncbigene

position:797855:1
position: 797855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:799207:1
position: 799207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:797855-799207:1:exon

NDUFB11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NDUFB11
product: NADH:ubiquinone oxidoreductase subunit B11
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083538.1
SIO_010081: NDUFB11
subclass of: SO_0000673
so part of: NDUFB11
location: join(797855..798019,798365..798495,799003..799207)
location: region:797855-799207:1
so has part: feature:797855-798019:1:exon
so has part: feature:798365-798495:1:exon
so has part: feature:799003-799207:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:797855-798019:1:exon

position:798019:1
position: 798019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:798365-798495:1:exon

position:798365:1
position: 798365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:798495:1
position: 798495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:799003-799207:1:exon

position:799003:1
position: 799003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NDUFB11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: NDUFB11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial
translation: MAALWRALRALPAGARGRSAGSPGAVALPRPLGADAHDEEPMLVAQRKNPDFHGFSADPEADVLNMRAVFLAGISVAIVLGSVFVYYLPDYGLQQWARREAEIQVRDRERKGLPLLTSNYYDPKRLPLPPPE
SIO_010081: NDUFB11
subclass of: SO_0000673
so part of: NDUFB11
location: join(797876..798019,798365..798495,799003..799126)
location: region:797876-799126:1
so has part: feature:797876-798019:1:exon
so has part: feature:798365-798495:1:exon
so has part: feature:799003-799126:1:exon

XP_032939429.1
type: Protein
SIO_000068: ncbiprotein

position:797876:1
position: 797876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:799126:1
position: 799126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:797876-798019:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:798365-798495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:799003-799126:1:exon

UBA1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: UBA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 800184..853006
location: region:800184-853006:1
so has part: feature:800184-853006:1:exon
subclass of: SO_0000010

117009310
type: Gene
SIO_000068: ncbigene

position:800184:1
position: 800184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:853006:1
position: 853006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:800184-853006:1:exon

UBA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: UBA1
product: ubiquitin like modifier activating enzyme 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033083543.1
SIO_010081: UBA1
subclass of: SO_0000673
so part of: UBA1
location: join(800184..800270,802565..802675,803859..803917,806810..806978,808196..808330,810891..810997,812333..812423,813570..813702,816134..816231,817977..818123,821277..821432,822538..822648,823458..823538,824204..824359,826910..827075,829527..829723,831671..831735,834193..834388,838095..838169,840450..840639,842094..842182,843109..843201,846433..846624,849048..849149,849977..850077,852702..853006)
location: region:800184-853006:1
so has part: feature:800184-800270:1:exon
so has part: feature:802565-802675:1:exon
so has part: feature:803859-803917:1:exon
so has part: feature:806810-806978:1:exon
so has part: feature:808196-808330:1:exon
so has part: feature:810891-810997:1:exon
so has part: feature:812333-812423:1:exon
so has part: feature:813570-813702:1:exon
so has part: feature:816134-816231:1:exon
so has part: feature:817977-818123:1:exon
so has part: feature:821277-821432:1:exon
so has part: feature:822538-822648:1:exon
so has part: feature:823458-823538:1:exon
so has part: feature:824204-824359:1:exon
so has part: feature:826910-827075:1:exon
so has part: feature:829527-829723:1:exon
so has part: feature:831671-831735:1:exon
so has part: feature:834193-834388:1:exon
so has part: feature:838095-838169:1:exon
so has part: feature:840450-840639:1:exon
so has part: feature:842094-842182:1:exon
so has part: feature:843109-843201:1:exon
so has part: feature:846433-846624:1:exon
so has part: feature:849048-849149:1:exon
so has part: feature:849977-850077:1:exon
so has part: feature:852702-853006:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:800184-800270:1:exon

position:800270:1
position: 800270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:802565-802675:1:exon

position:802565:1
position: 802565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:802675:1
position: 802675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:803859-803917:1:exon

position:803859:1
position: 803859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:803917:1
position: 803917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:806810-806978:1:exon

position:806810:1
position: 806810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806978:1
position: 806978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:808196-808330:1:exon

position:808196:1
position: 808196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808330:1
position: 808330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:810891-810997:1:exon

position:810891:1
position: 810891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:810997:1
position: 810997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:812333-812423:1:exon

position:812333:1
position: 812333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812423:1
position: 812423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:813570-813702:1:exon

position:813570:1
position: 813570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:813702:1
position: 813702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:816134-816231:1:exon

position:816134:1
position: 816134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:816231:1
position: 816231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:817977-818123:1:exon

position:817977:1
position: 817977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:818123:1
position: 818123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:821277-821432:1:exon

position:821277:1
position: 821277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:821432:1
position: 821432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:822538-822648:1:exon

position:822538:1
position: 822538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:822648:1
position: 822648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:823458-823538:1:exon

position:823458:1
position: 823458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:823538:1
position: 823538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:824204-824359:1:exon

position:824204:1
position: 824204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:824359:1
position: 824359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:826910-827075:1:exon

position:826910:1
position: 826910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:827075:1
position: 827075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:829527-829723:1:exon

position:829527:1
position: 829527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:829723:1
position: 829723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:831671-831735:1:exon

position:831671:1
position: 831671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:831735:1
position: 831735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:834193-834388:1:exon

position:834193:1
position: 834193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:834388:1
position: 834388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:838095-838169:1:exon

position:838095:1
position: 838095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:838169:1
position: 838169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:840450-840639:1:exon

position:840450:1
position: 840450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:840639:1
position: 840639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:842094-842182:1:exon

position:842094:1
position: 842094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:842182:1
position: 842182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:843109-843201:1:exon

position:843109:1
position: 843109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:843201:1
position: 843201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:846433-846624:1:exon

position:846433:1
position: 846433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:846624:1
position: 846624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:849048-849149:1:exon

position:849048:1
position: 849048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:849149:1
position: 849149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:849977-850077:1:exon

position:849977:1
position: 849977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:850077:1
position: 850077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:852702-853006:1:exon

position:852702:1
position: 852702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: UBA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-like modifier-activating enzyme 1
translation: MSSSPLSKKRRVSGSEAPTGSSRAPAPAVSPSVTPANGMAKNGAEAEIDEGLYSRQLYVLGHEAMKCMQTSNVLVSGLRGLGVEVAKNLVLGGVKSVTLHDPQPAAWADLSSQFYLREEDVGRSRAEASLPRLAELNSYVAVSSTREPLSQELLGSFQVVVLTNSPLEEQLWVGDFCHSRGIKLVVADTRGLFGQLFCDFGDDMVVTDPNGEQPLSAMVSMVTKGCPGEVTCLDEARHGFESGDFVTFTEVEGMEELNSCGPVEIRVLGPYTFSIGDTSTYGDYVRGGIVTQVKMPKHIHFKRLRDALAEPEMLVTDFGKAERPAVLHRAWQGLHRFLRQHGRAPRPRHQGDAAEVLALTKEVAAGAELDEELVRELAFQATGDLAPVNAFIGGLAAQEVMKAVSGKFTPITQWLYFDALECLPEENRDTLLTEEQCRPRNSRYDGQIAVFGAELQAKLGAQKYFVVGAGAIGCELLKNFAMVGLGCGPEGSVTVTDMDTIEKSNLNRQFLFRPWDVTKLKSERAAAAAREMNPALRVSSRTDRVGPDTERVYDDDFFEGLDGVANALDNVDARLYMDRRCVYYRKPLLESGTLGTKGNVQVVIPFLSESYSSSQDPPEKAIPICTLKNFPNAIEHTLQWARDEFEGLFKQPAENVNQYLMDPKFLERTLRLAGTQPLEVLEAVQRSLVSDRPKGWPDCVAWACRHWHRQYSNNIRQLLHNFPPGQKTNSGTLFWSGPKRCPHPLVFDPDNPLHLDYVVAAANLFAQSYGIAGSRDRAAVAELLRHVRVPPFAPKAGVRIHVSDQELQSASAALDDGRLEELKASLPSPEELPGFRMFPIDFEKDDDTNFHMDFIVAASNLRAENYDIPPADRHKSKLIAGKIIPAIATTTAAVVGLACLELFKLVQGHRRLSSYKNAFLNLALPFVGFSEPLACPRNKYYEVEWTLWDRFEVQGLQPDGQEMTLRQFLAYFKEVHRLEITMLSQGVSMLYSFFMPAAKLRERHDQPMTEIVARVSKKKLGRHVKALVFELCCNDDSDADIEVPYVRYTIR
SIO_010081: UBA1
subclass of: SO_0000673
so part of: UBA1
location: join(802565..802675,803859..803917,806810..806978,808196..808330,810891..810997,812333..812423,813570..813702,816134..816231,817977..818123,821277..821432,822538..822648,823458..823538,824204..824359,826910..827075,829527..829723,831671..831735,834193..834388,838095..838169,840450..840639,842094..842182,843109..843201,846433..846624,849048..849149,849977..850077,852702..852837)
location: region:802565-852837:1
so has part: feature:802565-802675:1:exon
so has part: feature:803859-803917:1:exon
so has part: feature:806810-806978:1:exon
so has part: feature:808196-808330:1:exon
so has part: feature:810891-810997:1:exon
so has part: feature:812333-812423:1:exon
so has part: feature:813570-813702:1:exon
so has part: feature:816134-816231:1:exon
so has part: feature:817977-818123:1:exon
so has part: feature:821277-821432:1:exon
so has part: feature:822538-822648:1:exon
so has part: feature:823458-823538:1:exon
so has part: feature:824204-824359:1:exon
so has part: feature:826910-827075:1:exon
so has part: feature:829527-829723:1:exon
so has part: feature:831671-831735:1:exon
so has part: feature:834193-834388:1:exon
so has part: feature:838095-838169:1:exon
so has part: feature:840450-840639:1:exon
so has part: feature:842094-842182:1:exon
so has part: feature:843109-843201:1:exon
so has part: feature:846433-846624:1:exon
so has part: feature:849048-849149:1:exon
so has part: feature:849977-850077:1:exon
so has part: feature:852702-852837:1:exon

XP_032939434.1
type: Protein
SIO_000068: ncbiprotein

position:852837:1
position: 852837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:802565-802675:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:803859-803917:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:806810-806978:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:808196-808330:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:810891-810997:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:812333-812423:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:813570-813702:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:816134-816231:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:817977-818123:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:821277-821432:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:822538-822648:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:823458-823538:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:824204-824359:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:826910-827075:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:829527-829723:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:831671-831735:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:834193-834388:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:838095-838169:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:840450-840639:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:842094-842182:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:843109-843201:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:846433-846624:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:849048-849149:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:849977-850077:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:852702-852837:1:exon

CCDC115
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: CCDC115
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(853852..858085)
location: region:853852-858085:-1
so has part: feature:853852-858085:-1:exon
subclass of: SO_0000010

117009311
type: Gene
SIO_000068: ncbigene

position:853852:-1
position: 853852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:858085:-1
position: 858085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:853852-858085:-1:exon

CCDC115
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CCDC115
product: coiled-coil domain containing 115, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083545.1
SIO_010081: CCDC115
subclass of: SO_0000673
so part of: CCDC115
location: complement(join(853852..854043,854120..854320,855546..855674,855837..855928,856902..857005,857717..857817,857995..858085))
location: region:853852-858085:-1
so has part: feature:857995-858085:-1:exon
so has part: feature:857717-857817:-1:exon
so has part: feature:856902-857005:-1:exon
so has part: feature:855837-855928:-1:exon
so has part: feature:855546-855674:-1:exon
so has part: feature:854120-854320:-1:exon
so has part: feature:853852-854043:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:857995-858085:-1:exon

position:857995:-1
position: 857995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:857717-857817:-1:exon

position:857717:-1
position: 857717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:857817:-1
position: 857817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:856902-857005:-1:exon

position:856902:-1
position: 856902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:857005:-1
position: 857005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:855837-855928:-1:exon

position:855837:-1
position: 855837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:855928:-1
position: 855928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:855546-855674:-1:exon

position:855546:-1
position: 855546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:855674:-1
position: 855674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:854120-854320:-1:exon

position:854120:-1
position: 854120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:854320:-1
position: 854320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:853852-854043:-1:exon

position:854043:-1
position: 854043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCDC115
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CCDC115
product: coiled-coil domain containing 115, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083544.1
SIO_010081: CCDC115
subclass of: SO_0000673
so part of: CCDC115
location: complement(join(853852..854320,855546..855674,855837..855928,856902..857005,857717..857817,857995..858085))
location: region:853852-858085:-1
so has part: feature:857995-858085:-1:exon
so has part: feature:857717-857817:-1:exon
so has part: feature:856902-857005:-1:exon
so has part: feature:855837-855928:-1:exon
so has part: feature:855546-855674:-1:exon
so has part: feature:853852-854320:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:857995-858085:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:857717-857817:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:856902-857005:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:855837-855928:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:855546-855674:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:853852-854320:-1:exon

CCDC115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CCDC115
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 115
translation: MDGSLSLSLDAAALEVMEALELLQQRREQLEQHLRQGWLSLAQARYSLGCHRVSSLQYGATMVPRVRVCHRQDPEGRPHFEEVPGTGGDPEDPDPQQGGGDGLRQRRGAPERGGSPPRPPPDPLSWFGVLVPPSLRQAQGSFQKGVTLAVEVAELQATMEAAAARYRQLLRQKCHLAGDNGDSRDSHTPTGTAGDTQGDTATSVTA
SIO_010081: CCDC115
subclass of: SO_0000673
so part of: CCDC115
location: complement(join(854133..854320,855546..855674,855837..855928,856902..857005,857717..857817,857995..858001))
location: region:854133-858001:-1
so has part: feature:857995-858001:-1:exon
so has part: feature:857717-857817:-1:exon
so has part: feature:856902-857005:-1:exon
so has part: feature:855837-855928:-1:exon
so has part: feature:855546-855674:-1:exon
so has part: feature:854133-854320:-1:exon

XP_032939435.1
type: Protein
SIO_000068: ncbiprotein

position:854133:-1
position: 854133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:858001:-1
position: 858001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:857995-858001:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:857717-857817:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:856902-857005:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:855837-855928:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:855546-855674:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:854133-854320:-1:exon

CCDC115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CCDC115
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 115
translation: MDGSLSLSLDAAALEVMEALELLQQRREQLEQHLRQGWLSLAQARYSLGCHRVSSLQYGATMVPRVRVCHRQDPEGRPHFEEVPGTGGDPEDPDPQQGGGDGLRQRRGAPERGGSPPRPPPDPLSWFGVLVPPSLRQAQGSFQKGVTLAVEVAELQATMEAAAARYRQLLRQKCHLAGDNGDSRDSHTPTGTAGDTQGDTATSVTA
SIO_010081: CCDC115
subclass of: SO_0000673
so part of: CCDC115
location: complement(join(854133..854320,855546..855674,855837..855928,856902..857005,857717..857817,857995..858001))
location: region:854133-858001:-1
so has part: feature:857995-858001:-1:exon
so has part: feature:857717-857817:-1:exon
so has part: feature:856902-857005:-1:exon
so has part: feature:855837-855928:-1:exon
so has part: feature:855546-855674:-1:exon
so has part: feature:854133-854320:-1:exon

XP_032939436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:857995-858001:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:857717-857817:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:856902-857005:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:855837-855928:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:855546-855674:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:854133-854320:-1:exon

IMP4
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: IMP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 858246..861606
location: region:858246-861606:1
so has part: feature:858246-861606:1:exon
subclass of: SO_0000010

117009280
type: Gene
SIO_000068: ncbigene

position:858246:1
position: 858246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:861606:1
position: 861606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:858246-861606:1:exon

IMP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: IMP4
product: IMP U3 small nucleolar ribonucleoprotein 4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083514.1
SIO_010081: IMP4
subclass of: SO_0000673
so part of: IMP4
location: join(858246..858296,858676..858784,859107..859190,859662..859771,860504..860636,860757..860911,860989..861083,861160..861230,861315..861606)
location: region:858246-861606:1
so has part: feature:858246-858296:1:exon
so has part: feature:858676-858784:1:exon
so has part: feature:859107-859190:1:exon
so has part: feature:859662-859771:1:exon
so has part: feature:860504-860636:1:exon
so has part: feature:860757-860911:1:exon
so has part: feature:860989-861083:1:exon
so has part: feature:861160-861230:1:exon
so has part: feature:861315-861606:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:858246-858296:1:exon

position:858296:1
position: 858296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:858676-858784:1:exon

position:858676:1
position: 858676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:858784:1
position: 858784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:859107-859190:1:exon

position:859107:1
position: 859107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:859190:1
position: 859190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:859662-859771:1:exon

position:859662:1
position: 859662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:859771:1
position: 859771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:860504-860636:1:exon

position:860504:1
position: 860504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:860636:1
position: 860636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:860757-860911:1:exon

position:860757:1
position: 860757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:860911:1
position: 860911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:860989-861083:1:exon

position:860989:1
position: 860989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:861083:1
position: 861083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:861160-861230:1:exon

position:861160:1
position: 861160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:861230:1
position: 861230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:861315-861606:1:exon

position:861315:1
position: 861315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IMP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: IMP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U3 small nucleolar ribonucleoprotein protein IMP4
translation: MLRRQARERREYLQRRAREQQQQRQRERRESLKRALDENRLLPTELRHEALALQKELEFDFEAPAGTGDSQDDEYRWAGLEPPKVMVTTSRDPSSRLRLFAKELCLLLPGARRMNRGRAELGALVGACRAAGVTDLLVLHETRGRPDGLTVSHLPHGPTAYFTLSGAVLRQEVGGLGGAPLAAPHLLLLRLDSTLGKRVGTILKHLFPVPRPESRRVVTFANEDDVILVRNHVYRRRGRTVELEEVGPRFQLRPYLIRLGTLEQGDAADVEWRWHPYTATAPKRRLLSVT
SIO_010081: IMP4
subclass of: SO_0000673
so part of: IMP4
location: join(858294..858296,858676..858784,859107..859190,859662..859771,860504..860636,860757..860911,860989..861083,861160..861230,861315..861427)
location: region:858294-861427:1
so has part: feature:858294-858296:1:exon
so has part: feature:858676-858784:1:exon
so has part: feature:859107-859190:1:exon
so has part: feature:859662-859771:1:exon
so has part: feature:860504-860636:1:exon
so has part: feature:860757-860911:1:exon
so has part: feature:860989-861083:1:exon
so has part: feature:861160-861230:1:exon
so has part: feature:861315-861427:1:exon

XP_032939405.1
type: Protein
SIO_000068: ncbiprotein

position:858294:1
position: 858294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:861427:1
position: 861427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:858294-858296:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:858676-858784:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:859107-859190:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:859662-859771:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:860504-860636:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:860757-860911:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:860989-861083:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:861160-861230:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:861315-861427:1:exon

PTPN18
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: PTPN18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(861560..863326)
location: region:861560-863326:-1
so has part: feature:861560-863326:-1:exon
subclass of: SO_0000010

117009283
type: Gene
SIO_000068: ncbigene

position:861560:-1
position: 861560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:863326:-1
position: 863326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:861560-863326:-1:exon

PTPN18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PTPN18
product: protein tyrosine phosphatase non-receptor type 18
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083517.1
SIO_010081: PTPN18
subclass of: SO_0000673
so part of: PTPN18
location: complement(join(861560..861762,861880..861954,862036..862247,862334..862389,862618..863326))
location: region:861560-863326:-1
so has part: feature:862618-863326:-1:exon
so has part: feature:862334-862389:-1:exon
so has part: feature:862036-862247:-1:exon
so has part: feature:861880-861954:-1:exon
so has part: feature:861560-861762:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:862618-863326:-1:exon

position:862618:-1
position: 862618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:862334-862389:-1:exon

position:862334:-1
position: 862334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:862389:-1
position: 862389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:862036-862247:-1:exon

position:862036:-1
position: 862036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:862247:-1
position: 862247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:861880-861954:-1:exon

position:861880:-1
position: 861880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:861954:-1
position: 861954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:861560-861762:-1:exon

position:861762:-1
position: 861762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PTPN18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PTPN18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein phosphatase non-receptor type 18
translation: MAPPPPPGHLSLARGVQPPLYQDAVARRALRPALLRSVSVPAEPPAPPAMDVTYAVVNKPRRGGGAAGRGPSPLDRDHAPFARDSAPSGTCSLPGSPVRRPSPSPAGSPRPTDGAYEVVTPPADPSSSPCLGFNSRIGKPKGPRDPPAEWSQV
SIO_010081: PTPN18
subclass of: SO_0000673
so part of: PTPN18
location: complement(join(861695..861762,861880..861954,862036..862247,862334..862389,862618..862668))
location: region:861695-862668:-1
so has part: feature:862618-862668:-1:exon
so has part: feature:862334-862389:-1:exon
so has part: feature:862036-862247:-1:exon
so has part: feature:861880-861954:-1:exon
so has part: feature:861695-861762:-1:exon

XP_032939408.1
type: Protein
SIO_000068: ncbiprotein

position:861695:-1
position: 861695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:862668:-1
position: 862668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:862618-862668:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:862334-862389:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:862036-862247:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:861880-861954:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:861695-861762:-1:exon

MON1B
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: MON1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 863392..867162
location: region:863392-867162:1
so has part: feature:863392-867162:1:exon
subclass of: SO_0000010

117009278
type: Gene
SIO_000068: ncbigene

position:863392:1
position: 863392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:867162:1
position: 867162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:863392-867162:1:exon

MON1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: MON1B
product: MON1 homolog B, secretory trafficking associated
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083511.1
SIO_010081: MON1B
subclass of: SO_0000673
so part of: MON1B
location: join(863392..863431,863860..864980,865344..866160,866248..866395,866960..867162)
location: region:863392-867162:1
so has part: feature:863392-863431:1:exon
so has part: feature:863860-864980:1:exon
so has part: feature:865344-866160:1:exon
so has part: feature:866248-866395:1:exon
so has part: feature:866960-867162:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:863392-863431:1:exon

position:863431:1
position: 863431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:863860-864980:1:exon

position:863860:1
position: 863860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:864980:1
position: 864980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:865344-866160:1:exon

position:865344:1
position: 865344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:866160:1
position: 866160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:866248-866395:1:exon

position:866248:1
position: 866248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:866395:1
position: 866395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:866960-867162:1:exon

position:866960:1
position: 866960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MON1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: MON1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar fusion protein MON1 homolog B
translation: MDPARTVDTVFPGCHHSGEDEEESVTAVAAVTSSVCHPASNEEEEEDKEVAAVVTATMSLGCHPSEDEEVAVGVTSQGGPCGRDEDVLAPATTSQSCHAGEEEEEVTTAVTTAVTSPGMQLSEEEMTKATMSPAHPHVGAEEEVTAAVTSPACHPGEEEEVTAAVTSPACHCEEKEEEVTAAVTSPARHRSEEEEVTTAVTSAVCHPREEEEVTAAVTSPACHPEEEEEEATPVVMSPVCHPSEEEEEVTAAVTAAAATSAPGGRRGADEDVAAAGWRARRKHVFVLSEAGKPIYSRHGNEEALAATMGVMMALVSFIQSGGNAIRAICSEDRTLVFEQRGPLLLVSVSRTRQSAAQLRRELAFVHEQILSLLTRGGIARVFARRRGFDLRRLLAGAEAVLDRLLCGAAADGRLLLGAARCLPLPGGLRRAVSGALRRAAAAARPAPALAVLAARGRLVTAARQRALAEGGRLCASDLHLLLNLLGGGAGAGEVWTPVCLPRFNPDGYFYAYAARLGEEEEEEGGVTLILLSTEREGFYAAAACRRQLEDTLRAQGWLAELAAAVRGGAGYGPSRPGAPELRHFLYKPLEGPEEMQQLPQFTSPELEEPYTSEEEQHRLFDLYHYLHSRVHSPHRPLRLLYHVAEKETLLAWVTSKFELYSCFSPLVTKAGAIAVLTKLLRWLKKEEDWLFIRYPAPFCAAPARPEAPEPEG
SIO_010081: MON1B
subclass of: SO_0000673
so part of: MON1B
location: join(863990..864980,865344..866160,866248..866395,866960..867142)
location: region:863990-867142:1
so has part: feature:863990-864980:1:exon
so has part: feature:865344-866160:1:exon
so has part: feature:866248-866395:1:exon
so has part: feature:866960-867142:1:exon

XP_032939402.1
type: Protein
SIO_000068: ncbiprotein

position:863990:1
position: 863990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:867142:1
position: 867142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:863990-864980:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:865344-866160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:866248-866395:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:866960-867142:1:exon

LOC117009281
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009281
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 867190..874814
location: region:867190-874814:1
so has part: feature:867190-874814:1:exon
subclass of: SO_0000010

117009281
type: Gene
SIO_000068: ncbigene

position:867190:1
position: 867190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874814:1
position: 874814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:867190-874814:1:exon

LOC117009281
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009281
product: trichohyalin-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_033083516.1
SIO_010081: LOC117009281
subclass of: SO_0000673
so part of: LOC117009281
location: join(867190..867215,868372..868436,869970..870171,870251..870325,870860..870907,871182..871236,871325..871414,871512..871575,871734..871800,873307..873361,873448..873537,874217..874814)
location: region:867190-874814:1
so has part: feature:867190-867215:1:exon
so has part: feature:868372-868436:1:exon
so has part: feature:869970-870171:1:exon
so has part: feature:870251-870325:1:exon
so has part: feature:870860-870907:1:exon
so has part: feature:871182-871236:1:exon
so has part: feature:871325-871414:1:exon
so has part: feature:871512-871575:1:exon
so has part: feature:871734-871800:1:exon
so has part: feature:873307-873361:1:exon
so has part: feature:873448-873537:1:exon
so has part: feature:874217-874814:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:867190-867215:1:exon

position:867215:1
position: 867215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:868372-868436:1:exon

position:868372:1
position: 868372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868436:1
position: 868436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:869970-870171:1:exon

position:869970:1
position: 869970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:870171:1
position: 870171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:870251-870325:1:exon

position:870251:1
position: 870251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:870325:1
position: 870325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:870860-870907:1:exon

position:870860:1
position: 870860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:870907:1
position: 870907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:871182-871236:1:exon

position:871182:1
position: 871182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:871236:1
position: 871236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:871325-871414:1:exon

position:871325:1
position: 871325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:871414:1
position: 871414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:871512-871575:1:exon

position:871512:1
position: 871512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:871575:1
position: 871575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:871734-871800:1:exon

position:871734:1
position: 871734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:871800:1
position: 871800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:873307-873361:1:exon

position:873307:1
position: 873307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873361:1
position: 873361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:873448-873537:1:exon

position:873448:1
position: 873448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873537:1
position: 873537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:874217-874814:1:exon

position:874217:1
position: 874217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117009281
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009281
product: trichohyalin-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_033083515.1
SIO_010081: LOC117009281
subclass of: SO_0000673
so part of: LOC117009281
location: join(868152..868436,869970..870171,870251..870325,870860..870907,871182..871236,871325..871414,871512..871575,871734..871800,873307..873361,873448..873537,874217..874814)
location: region:868152-874814:1
so has part: feature:868152-868436:1:exon
so has part: feature:869970-870171:1:exon
so has part: feature:870251-870325:1:exon
so has part: feature:870860-870907:1:exon
so has part: feature:871182-871236:1:exon
so has part: feature:871325-871414:1:exon
so has part: feature:871512-871575:1:exon
so has part: feature:871734-871800:1:exon
so has part: feature:873307-873361:1:exon
so has part: feature:873448-873537:1:exon
so has part: feature:874217-874814:1:exon

position:868152:1
position: 868152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:868152-868436:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:869970-870171:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:870251-870325:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:870860-870907:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:871182-871236:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:871325-871414:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:871512-871575:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:871734-871800:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:873307-873361:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:873448-873537:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:874217-874814:1:exon

LOC117009281
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009281
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trichohyalin-like
translation: MMEKDPRSEELNKQDTLRPPVSPRPKGQVLPGVPKKSSVPGSCPAAPSGHPEVEVLQKQAHTLRKVHRVVVEELARAQQSSEELHQRLEKLKQQKEALKEPRKKLQELLQRAQLHSEEVKAQGQRKSGICLEQQQGLEGTEQKWEQFLFECREQRWQYCQKLDAITEEFKHLRVTHTPDHLKAELVKLEKMEEKFLNWERCLKKTVELICPEALVAMQLVREEQERAERRLEAELRRQQQSRERRDRLAEELRQLQLSMEAQPE
SIO_010081: LOC117009281
subclass of: SO_0000673
so part of: LOC117009281
location: join(869976..870171,870251..870325,870860..870907,871182..871236,871325..871414,871512..871575,871734..871800,873307..873361,873448..873537,874217..874271)
location: region:869976-874271:1
so has part: feature:869976-870171:1:exon
so has part: feature:870251-870325:1:exon
so has part: feature:870860-870907:1:exon
so has part: feature:871182-871236:1:exon
so has part: feature:871325-871414:1:exon
so has part: feature:871512-871575:1:exon
so has part: feature:871734-871800:1:exon
so has part: feature:873307-873361:1:exon
so has part: feature:873448-873537:1:exon
so has part: feature:874217-874271:1:exon

XP_032939406.1
type: Protein
SIO_000068: ncbiprotein

position:869976:1
position: 869976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874271:1
position: 874271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:869976-870171:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:870251-870325:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:870860-870907:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:871182-871236:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:871325-871414:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:871512-871575:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:871734-871800:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:873307-873361:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:873448-873537:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:874217-874271:1:exon

LOC117009281
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009281
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trichohyalin-like
translation: MMEKDPRSEELNKQDTLRPPVSPRPKGQVLPGVPKKSSVPGSCPAAPSGHPEVEVLQKQAHTLRKVHRVVVEELARAQQSSEELHQRLEKLKQQKEALKEPRKKLQELLQRAQLHSEEVKAQGQRKSGICLEQQQGLEGTEQKWEQFLFECREQRWQYCQKLDAITEEFKHLRVTHTPDHLKAELVKLEKMEEKFLNWERCLKKTVELICPEALVAMQLVREEQERAERRLEAELRRQQQSRERRDRLAEELRQLQLSMEAQPE
SIO_010081: LOC117009281
subclass of: SO_0000673
so part of: LOC117009281
location: join(869976..870171,870251..870325,870860..870907,871182..871236,871325..871414,871512..871575,871734..871800,873307..873361,873448..873537,874217..874271)
location: region:869976-874271:1
so has part: feature:869976-870171:1:exon
so has part: feature:870251-870325:1:exon
so has part: feature:870860-870907:1:exon
so has part: feature:871182-871236:1:exon
so has part: feature:871325-871414:1:exon
so has part: feature:871512-871575:1:exon
so has part: feature:871734-871800:1:exon
so has part: feature:873307-873361:1:exon
so has part: feature:873448-873537:1:exon
so has part: feature:874217-874271:1:exon

XP_032939407.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:869976-870171:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:870251-870325:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:870860-870907:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:871182-871236:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:871325-871414:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:871512-871575:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:871734-871800:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:873307-873361:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:873448-873537:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:874217-874271:1:exon

CXXC1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: CXXC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 874980..901618
location: region:874980-901618:1
so has part: feature:874980-901618:1:exon
subclass of: SO_0000010

117009279
type: Gene
SIO_000068: ncbigene

position:874980:1
position: 874980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:901618:1
position: 901618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:874980-901618:1:exon

CXXC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CXXC1
product: CXXC finger protein 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083513.1
SIO_010081: CXXC1
subclass of: SO_0000673
so part of: CXXC1
location: join(874980..875128,875253..875350,876073..876173,877585..877688,878683..878838,882185..882211,884407..884556,887960..888067,889404..889588,891988..892195,895026..895136,896189..896238,897221..897317,899450..899602,901373..901618)
location: region:874980-901618:1
so has part: feature:874980-875128:1:exon
so has part: feature:875253-875350:1:exon
so has part: feature:876073-876173:1:exon
so has part: feature:877585-877688:1:exon
so has part: feature:878683-878838:1:exon
so has part: feature:882185-882211:1:exon
so has part: feature:884407-884556:1:exon
so has part: feature:887960-888067:1:exon
so has part: feature:889404-889588:1:exon
so has part: feature:891988-892195:1:exon
so has part: feature:895026-895136:1:exon
so has part: feature:896189-896238:1:exon
so has part: feature:897221-897317:1:exon
so has part: feature:899450-899602:1:exon
so has part: feature:901373-901618:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:874980-875128:1:exon

position:875128:1
position: 875128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:875253-875350:1:exon

position:875253:1
position: 875253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875350:1
position: 875350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:876073-876173:1:exon

position:876073:1
position: 876073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:876173:1
position: 876173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:877585-877688:1:exon

position:877585:1
position: 877585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877688:1
position: 877688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:878683-878838:1:exon

position:878683:1
position: 878683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:878838:1
position: 878838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:882185-882211:1:exon

position:882185:1
position: 882185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:882211:1
position: 882211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:884407-884556:1:exon

position:884407:1
position: 884407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:884556:1
position: 884556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:887960-888067:1:exon

position:887960:1
position: 887960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:888067:1
position: 888067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:889404-889588:1:exon

position:889404:1
position: 889404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:889588:1
position: 889588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:891988-892195:1:exon

position:891988:1
position: 891988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:892195:1
position: 892195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:895026-895136:1:exon

position:895026:1
position: 895026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895136:1
position: 895136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:896189-896238:1:exon

position:896189:1
position: 896189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:896238:1
position: 896238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:897221-897317:1:exon

position:897221:1
position: 897221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:897317:1
position: 897317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:899450-899602:1:exon

position:899450:1
position: 899450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:899602:1
position: 899602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:901373-901618:1:exon

position:901373:1
position: 901373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CXXC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CXXC1
product: CXXC finger protein 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083512.1
SIO_010081: CXXC1
subclass of: SO_0000673
so part of: CXXC1
location: join(875024..875128,875253..875350,876073..876173,877585..877688,878683..878838,882185..882211,887960..888067,889404..889588,891988..892195,895026..895136,896189..896238,897221..897317,899450..899602,901373..901618)
location: region:875024-901618:1
so has part: feature:875024-875128:1:exon
so has part: feature:875253-875350:1:exon
so has part: feature:876073-876173:1:exon
so has part: feature:877585-877688:1:exon
so has part: feature:878683-878838:1:exon
so has part: feature:882185-882211:1:exon
so has part: feature:887960-888067:1:exon
so has part: feature:889404-889588:1:exon
so has part: feature:891988-892195:1:exon
so has part: feature:895026-895136:1:exon
so has part: feature:896189-896238:1:exon
so has part: feature:897221-897317:1:exon
so has part: feature:899450-899602:1:exon
so has part: feature:901373-901618:1:exon

position:875024:1
position: 875024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:875024-875128:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:875253-875350:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:876073-876173:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:877585-877688:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:878683-878838:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:882185-882211:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:887960-888067:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:889404-889588:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:891988-892195:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:895026-895136:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:896189-896238:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:897221-897317:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:899450-899602:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:901373-901618:1:exon

CXXC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CXXC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CXXC-type zinc finger protein 1 isoform X2
translation: MDSEFSDAEAAPGGEENAPVYCVCRKPDINCFMIGCDNCNEWFHGDCINITERMAKAIREWYCRQCREKDPSLEIRYRHKKWREKEHEGTKGQELEPGRAAKIKRSARMCGECEACRRPEDCGQCDFCRDMKKFGGPNKIRQKCRLRQCQLRARESYKYFPTSLARGREGDLELLKAQLGGPGPPESLSDEELPLDPRLYQELCAGAFDEHGLPWLSDAEDAPFLDPVLRKRAVKVKHVKRREKKSDKKKEERYKRHRQRARHRERRGHPERADARDPAGLGQCLGPGCTRPARPPSKYCSEACGIKLAANRIYEILPQRIQQWQQSPCVAEEHGKRLLERIRREQHQARLRLQEMERRFHELEGLIARAKGHPPREDEESTEGDSEDTDLQIFCVSCGHPINPKVALRHMERCYAKYESQTSFGSMYPTRIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKVPADEVCGCPLVRDVFELTGDFCRVPKRKCHRHYCWEKLRRAEVDLERVRVWYKLDELFEQERNVRAAMTNRAGLLALMLHQTIQHDPLTTDLRSDR
SIO_010081: CXXC1
subclass of: SO_0000673
so part of: CXXC1
location: join(875126..875128,875253..875350,876073..876173,877585..877688,878683..878838,882185..882211,884407..884556,887960..888067,889404..889588,891988..892195,895026..895136,896189..896238,897221..897317,899450..899602,901373..901513)
location: region:875126-901513:1
so has part: feature:875126-875128:1:exon
so has part: feature:875253-875350:1:exon
so has part: feature:876073-876173:1:exon
so has part: feature:877585-877688:1:exon
so has part: feature:878683-878838:1:exon
so has part: feature:882185-882211:1:exon
so has part: feature:884407-884556:1:exon
so has part: feature:887960-888067:1:exon
so has part: feature:889404-889588:1:exon
so has part: feature:891988-892195:1:exon
so has part: feature:895026-895136:1:exon
so has part: feature:896189-896238:1:exon
so has part: feature:897221-897317:1:exon
so has part: feature:899450-899602:1:exon
so has part: feature:901373-901513:1:exon

XP_032939404.1
type: Protein
SIO_000068: ncbiprotein

position:875126:1
position: 875126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:901513:1
position: 901513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:875126-875128:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:875253-875350:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:876073-876173:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:877585-877688:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:878683-878838:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:882185-882211:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:884407-884556:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:887960-888067:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:889404-889588:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:891988-892195:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:895026-895136:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:896189-896238:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:897221-897317:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:899450-899602:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:901373-901513:1:exon

CXXC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CXXC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CXXC-type zinc finger protein 1 isoform X1
translation: MDSEFSDAEAAPGGEENAPVYCVCRKPDINCFMIGCDNCNEWFHGDCINITERMAKAIREWYCRQCREKDPSLEIRYRHKKWREKEHEGTKGQELEPGRAAKIKRSARMCGECEACRRPEDCGQCDFCRDMKKFGGPNKIRQKCRLRQCQLRARESYKYFPTSPWLSDAEDAPFLDPVLRKRAVKVKHVKRREKKSDKKKEERYKRHRQRARHRERRGHPERADARDPAGLGQCLGPGCTRPARPPSKYCSEACGIKLAANRIYEILPQRIQQWQQSPCVAEEHGKRLLERIRREQHQARLRLQEMERRFHELEGLIARAKGHPPREDEESTEGDSEDTDLQIFCVSCGHPINPKVALRHMERCYAKYESQTSFGSMYPTRIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKVPADEVCGCPLVRDVFELTGDFCRVPKRKCHRHYCWEKLRRAEVDLERVRVWYKLDELFEQERNVRAAMTNRAGLLALMLHQTIQHDPLTTDLRSDR
SIO_010081: CXXC1
subclass of: SO_0000673
so part of: CXXC1
location: join(875126..875128,875253..875350,876073..876173,877585..877688,878683..878838,882185..882211,887960..888067,889404..889588,891988..892195,895026..895136,896189..896238,897221..897317,899450..899602,901373..901513)
location: region:875126-901513:1
so has part: feature:875126-875128:1:exon
so has part: feature:875253-875350:1:exon
so has part: feature:876073-876173:1:exon
so has part: feature:877585-877688:1:exon
so has part: feature:878683-878838:1:exon
so has part: feature:882185-882211:1:exon
so has part: feature:887960-888067:1:exon
so has part: feature:889404-889588:1:exon
so has part: feature:891988-892195:1:exon
so has part: feature:895026-895136:1:exon
so has part: feature:896189-896238:1:exon
so has part: feature:897221-897317:1:exon
so has part: feature:899450-899602:1:exon
so has part: feature:901373-901513:1:exon

XP_032939403.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:875126-875128:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:875253-875350:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:876073-876173:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:877585-877688:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:878683-878838:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:882185-882211:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:887960-888067:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:889404-889588:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:891988-892195:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:895026-895136:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:896189-896238:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:897221-897317:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:899450-899602:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:901373-901513:1:exon

MBD1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: MBD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 902633..916561
location: region:902633-916561:1
so has part: feature:902633-916561:1:exon
subclass of: SO_0000010

117009316
type: Gene
SIO_000068: ncbigene

position:902633:1
position: 902633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:916561:1
position: 916561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:902633-916561:1:exon

MBD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: MBD1
product: methyl-CpG binding domain protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033083550.2
SIO_010081: MBD1
subclass of: SO_0000673
so part of: MBD1
location: join(902633..902818,903408..903529,903974..904088,904387..904658,905517..905602,905975..906015,906238..906387,909283..909417,909510..909557,910521..910577,910663..910731,911511..911675,912685..912948,913033..913119,913217..913300,915960..916561)
location: region:902633-916561:1
so has part: feature:902633-902818:1:exon
so has part: feature:903408-903529:1:exon
so has part: feature:903974-904088:1:exon
so has part: feature:904387-904658:1:exon
so has part: feature:905517-905602:1:exon
so has part: feature:905975-906015:1:exon
so has part: feature:906238-906387:1:exon
so has part: feature:909283-909417:1:exon
so has part: feature:909510-909557:1:exon
so has part: feature:910521-910577:1:exon
so has part: feature:910663-910731:1:exon
so has part: feature:911511-911675:1:exon
so has part: feature:912685-912948:1:exon
so has part: feature:913033-913119:1:exon
so has part: feature:913217-913300:1:exon
so has part: feature:915960-916561:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:902633-902818:1:exon

position:902818:1
position: 902818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:903408-903529:1:exon

position:903408:1
position: 903408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:903529:1
position: 903529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:903974-904088:1:exon

position:903974:1
position: 903974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:904088:1
position: 904088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:904387-904658:1:exon

position:904387:1
position: 904387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:904658:1
position: 904658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:905517-905602:1:exon

position:905517:1
position: 905517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:905602:1
position: 905602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:905975-906015:1:exon

position:905975:1
position: 905975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:906015:1
position: 906015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:906238-906387:1:exon

position:906238:1
position: 906238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:906387:1
position: 906387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:909283-909417:1:exon

position:909283:1
position: 909283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:909417:1
position: 909417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:909510-909557:1:exon

position:909510:1
position: 909510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:909557:1
position: 909557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:910521-910577:1:exon

position:910521:1
position: 910521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:910577:1
position: 910577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:910663-910731:1:exon

position:910663:1
position: 910663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:910731:1
position: 910731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:911511-911675:1:exon

position:911511:1
position: 911511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:911675:1
position: 911675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:912685-912948:1:exon

position:912685:1
position: 912685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:912948:1
position: 912948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:913033-913119:1:exon

position:913033:1
position: 913033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913119:1
position: 913119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:913217-913300:1:exon

position:913217:1
position: 913217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913300:1
position: 913300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:915960-916561:1:exon

position:915960:1
position: 915960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MBD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: MBD1
product: methyl-CpG binding domain protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033083551.2
SIO_010081: MBD1
subclass of: SO_0000673
so part of: MBD1
location: join(902633..902818,903408..903529,903974..904088,904387..904658,905517..905602,905975..906015,906238..906387,909283..909417,909510..909557,910521..910577,910666..910731,911511..911675,912685..912948,913033..913119,913217..913300,915960..916561)
location: region:902633-916561:1
so has part: feature:902633-902818:1:exon
so has part: feature:903408-903529:1:exon
so has part: feature:903974-904088:1:exon
so has part: feature:904387-904658:1:exon
so has part: feature:905517-905602:1:exon
so has part: feature:905975-906015:1:exon
so has part: feature:906238-906387:1:exon
so has part: feature:909283-909417:1:exon
so has part: feature:909510-909557:1:exon
so has part: feature:910521-910577:1:exon
so has part: feature:910666-910731:1:exon
so has part: feature:911511-911675:1:exon
so has part: feature:912685-912948:1:exon
so has part: feature:913033-913119:1:exon
so has part: feature:913217-913300:1:exon
so has part: feature:915960-916561:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:902633-902818:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:903408-903529:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:903974-904088:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:904387-904658:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:905517-905602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:905975-906015:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:906238-906387:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:909283-909417:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:909510-909557:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:910521-910577:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:910666-910731:1:exon

position:910666:1
position: 910666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:911511-911675:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:912685-912948:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:913033-913119:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:913217-913300:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:915960-916561:1:exon

MBD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: MBD1
product: methyl-CpG binding domain protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033083552.2
SIO_010081: MBD1
subclass of: SO_0000673
so part of: MBD1
location: join(902633..902740,903408..903529,903974..904088,904387..904658,905517..905602,905975..906015,906238..906387,909283..909417,909510..909557,910521..910577,910663..910731,911511..911675,912685..912948,913033..913119,913217..913300,915960..916560)
location: region:902633-916560:1
so has part: feature:902633-902740:1:exon
so has part: feature:903408-903529:1:exon
so has part: feature:903974-904088:1:exon
so has part: feature:904387-904658:1:exon
so has part: feature:905517-905602:1:exon
so has part: feature:905975-906015:1:exon
so has part: feature:906238-906387:1:exon
so has part: feature:909283-909417:1:exon
so has part: feature:909510-909557:1:exon
so has part: feature:910521-910577:1:exon
so has part: feature:910663-910731:1:exon
so has part: feature:911511-911675:1:exon
so has part: feature:912685-912948:1:exon
so has part: feature:913033-913119:1:exon
so has part: feature:913217-913300:1:exon
so has part: feature:915960-916560:1:exon

position:916560:1
position: 916560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:902633-902740:1:exon

position:902740:1
position: 902740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:903408-903529:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:903974-904088:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:904387-904658:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:905517-905602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:905975-906015:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:906238-906387:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:909283-909417:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:909510-909557:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:910521-910577:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:910663-910731:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:911511-911675:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:912685-912948:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:913033-913119:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:913217-913300:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:915960-916560:1:exon

MBD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: MBD1
product: methyl-CpG binding domain protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_033083553.2
SIO_010081: MBD1
subclass of: SO_0000673
so part of: MBD1
location: join(902633..902818,903408..903529,903974..904088,904387..904658,905517..905602,905975..906015,906238..906387,909283..909417,909510..909557,910521..910577,910663..910731,912685..912948,913033..913119,913217..913300,915960..916559)
location: region:902633-916559:1
so has part: feature:902633-902818:1:exon
so has part: feature:903408-903529:1:exon
so has part: feature:903974-904088:1:exon
so has part: feature:904387-904658:1:exon
so has part: feature:905517-905602:1:exon
so has part: feature:905975-906015:1:exon
so has part: feature:906238-906387:1:exon
so has part: feature:909283-909417:1:exon
so has part: feature:909510-909557:1:exon
so has part: feature:910521-910577:1:exon
so has part: feature:910663-910731:1:exon
so has part: feature:912685-912948:1:exon
so has part: feature:913033-913119:1:exon
so has part: feature:913217-913300:1:exon
so has part: feature:915960-916559:1:exon

position:916559:1
position: 916559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:902633-902818:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:903408-903529:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:903974-904088:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:904387-904658:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:905517-905602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:905975-906015:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:906238-906387:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:909283-909417:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:909510-909557:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:910521-910577:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:910663-910731:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:912685-912948:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:913033-913119:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:913217-913300:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:915960-916559:1:exon

MBD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: MBD1
product: methyl-CpG binding domain protein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_033083554.2
SIO_010081: MBD1
subclass of: SO_0000673
so part of: MBD1
location: join(902633..902818,903408..903529,903974..904088,904387..904658,905517..905602,905975..906015,906238..906387,909283..909417,909510..909557,910521..910577,910666..910731,912685..912948,913033..913119,913217..913300,915960..916559)
location: region:902633-916559:1
so has part: feature:902633-902818:1:exon
so has part: feature:903408-903529:1:exon
so has part: feature:903974-904088:1:exon
so has part: feature:904387-904658:1:exon
so has part: feature:905517-905602:1:exon
so has part: feature:905975-906015:1:exon
so has part: feature:906238-906387:1:exon
so has part: feature:909283-909417:1:exon
so has part: feature:909510-909557:1:exon
so has part: feature:910521-910577:1:exon
so has part: feature:910666-910731:1:exon
so has part: feature:912685-912948:1:exon
so has part: feature:913033-913119:1:exon
so has part: feature:913217-913300:1:exon
so has part: feature:915960-916559:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:902633-902818:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:903408-903529:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:903974-904088:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:904387-904658:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:905517-905602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:905975-906015:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:906238-906387:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:909283-909417:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:909510-909557:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:910521-910577:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:910666-910731:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:912685-912948:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:913033-913119:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:913217-913300:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:915960-916559:1:exon

MBD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: MBD1
product: methyl-CpG binding domain protein 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_033083555.2
SIO_010081: MBD1
subclass of: SO_0000673
so part of: MBD1
location: join(902633..902818,903408..903529,903974..904088,904387..904658,905517..905602,905975..906015,906238..906387,909283..909417,909510..909557,910521..910577,912685..912948,913033..913119,913217..913300,915960..916559)
location: region:902633-916559:1
so has part: feature:902633-902818:1:exon
so has part: feature:903408-903529:1:exon
so has part: feature:903974-904088:1:exon
so has part: feature:904387-904658:1:exon
so has part: feature:905517-905602:1:exon
so has part: feature:905975-906015:1:exon
so has part: feature:906238-906387:1:exon
so has part: feature:909283-909417:1:exon
so has part: feature:909510-909557:1:exon
so has part: feature:910521-910577:1:exon
so has part: feature:912685-912948:1:exon
so has part: feature:913033-913119:1:exon
so has part: feature:913217-913300:1:exon
so has part: feature:915960-916559:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:902633-902818:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:903408-903529:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:903974-904088:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:904387-904658:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:905517-905602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:905975-906015:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:906238-906387:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:909283-909417:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:909510-909557:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:910521-910577:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:912685-912948:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:913033-913119:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:913217-913300:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:915960-916559:1:exon

MBD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: MBD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methyl-CpG-binding domain protein 1 isoform X1
translation: MGTVRDCGTAAGLWSGAGSLREPSGETRPPQRRMAEGWAECPALGPGWQRREAFRKSGATSGRSDTYYRSPTGQKFRSKIELRRFLGPGHDLSNFDFKSGLQRPSHTRTKKAPKWHLPTVPLPEPPKIFKKEEMEVVGGAETVKAPPLSHEAPPSSFPALPIPIQATPLSLEATPPSDPTLRRTRKRPPLEPPQDGVVALCASCHTLFPGVSLPPQRRCRWLCPDCRAQRRDFNREQRFYKRVGCGSCQACRIPEDCGICSACARNPPGAPAGPGRAPKCLLRRCLRIVKKGLGCGSCSGCLSTEDCGSCCICLRRLQPGLKRQWRCLRRRCLRPKKARAAKKSQSPLPLTEKWKPPMEREPSDASSSRHRKILTKGKEKKKPGRPPKPPGPRGRGVRSRASRRCGVCAACRRPADCGRCDFCRDKPKFGGQNLKRQKCRWRQCLRCAMDKEELLGGAENSPGPLPGPPLRLCPIKEEAGPLPRLEVRPPGRLGPSLDTWDPPVTPPAPQDPRLGLLIASAPRLKGAPPEPSAAPQRPPPGDLGVLIAATPRVKQEQPQPSASLVPVPPSAPLVVLDESEEEEEEEEEEGGNRVPFPLPPAPQLWPGSFLEELAEIPLPAHWGVVGADGGPGPCPARGLRLVQRCPRSSMAAAAVLLNPGLAFRVLVARGRPVPPGHEVLARRPPLRSVLDLVELLCDLEAYGPCPGPPGPPGRPPAPRCHVLVRGGRSCRPCQLLAGEGH
SIO_010081: MBD1
subclass of: SO_0000673
so part of: MBD1
location: join(902732..902818,903408..903529,903974..904088,904387..904658,905517..905602,905975..906015,906238..906387,909283..909417,909510..909557,910521..910577,910663..910731,911511..911675,912685..912948,913033..913119,913217..913300,915960..916403)
location: region:902732-916403:1
so has part: feature:902732-902818:1:exon
so has part: feature:903408-903529:1:exon
so has part: feature:903974-904088:1:exon
so has part: feature:904387-904658:1:exon
so has part: feature:905517-905602:1:exon
so has part: feature:905975-906015:1:exon
so has part: feature:906238-906387:1:exon
so has part: feature:909283-909417:1:exon
so has part: feature:909510-909557:1:exon
so has part: feature:910521-910577:1:exon
so has part: feature:910663-910731:1:exon
so has part: feature:911511-911675:1:exon
so has part: feature:912685-912948:1:exon
so has part: feature:913033-913119:1:exon
so has part: feature:913217-913300:1:exon
so has part: feature:915960-916403:1:exon

XP_032939441.1
type: Protein
SIO_000068: ncbiprotein

position:902732:1
position: 902732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:916403:1
position: 916403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:902732-902818:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:903408-903529:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:903974-904088:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:904387-904658:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:905517-905602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:905975-906015:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:906238-906387:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:909283-909417:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:909510-909557:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:910521-910577:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:910663-910731:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:911511-911675:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:912685-912948:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:913033-913119:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:913217-913300:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:915960-916403:1:exon

MBD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: MBD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methyl-CpG-binding domain protein 1 isoform X4
translation: MGTVRDCGTAAGLWSGAGSLREPSGETRPPQRRMAEGWAECPALGPGWQRREAFRKSGATSGRSDTYYRSPTGQKFRSKIELRRFLGPGHDLSNFDFKSGLQRPSHTRTKKAPKWHLPTVPLPEPPKIFKKEEMEVVGGAETVKAPPLSHEAPPSSFPALPIPIQATPLSLEATPPSDPTLRRTRKRPPLEPPQDGVVALCASCHTLFPGVSLPPQRRCRWLCPDCRAQRRDFNREQRFYKRVGCGSCQACRIPEDCGICSACARNPPGAPAGPGRAPKCLLRRCLRIVKKGLGCGSCSGCLSTEDCGSCCICLRRLQPGLKRQWRCLRRRCLRPKKARAAKKSQSPLPLTEKWKPPMEREPSDASSSRHRKILTKGKEKKKPGRPPKPPGPRGDKEELLGGAENSPGPLPGPPLRLCPIKEEAGPLPRLEVRPPGRLGPSLDTWDPPVTPPAPQDPRLGLLIASAPRLKGAPPEPSAAPQRPPPGDLGVLIAATPRVKQEQPQPSASLVPVPPSAPLVVLDESEEEEEEEEEEGGNRVPFPLPPAPQLWPGSFLEELAEIPLPAHWGVVGADGGPGPCPARGLRLVQRCPRSSMAAAAVLLNPGLAFRVLVARGRPVPPGHEVLARRPPLRSVLDLVELLCDLEAYGPCPGPPGPPGRPPAPRCHVLVRGGRSCRPCQLLAGEGH
SIO_010081: MBD1
subclass of: SO_0000673
so part of: MBD1
location: join(902732..902818,903408..903529,903974..904088,904387..904658,905517..905602,905975..906015,906238..906387,909283..909417,909510..909557,910521..910577,910663..910731,912685..912948,913033..913119,913217..913300,915960..916403)
location: region:902732-916403:1
so has part: feature:902732-902818:1:exon
so has part: feature:903408-903529:1:exon
so has part: feature:903974-904088:1:exon
so has part: feature:904387-904658:1:exon
so has part: feature:905517-905602:1:exon
so has part: feature:905975-906015:1:exon
so has part: feature:906238-906387:1:exon
so has part: feature:909283-909417:1:exon
so has part: feature:909510-909557:1:exon
so has part: feature:910521-910577:1:exon
so has part: feature:910663-910731:1:exon
so has part: feature:912685-912948:1:exon
so has part: feature:913033-913119:1:exon
so has part: feature:913217-913300:1:exon
so has part: feature:915960-916403:1:exon

XP_032939444.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:902732-902818:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:903408-903529:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:903974-904088:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:904387-904658:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:905517-905602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:905975-906015:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:906238-906387:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:909283-909417:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:909510-909557:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:910521-910577:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:910663-910731:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:912685-912948:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:913033-913119:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:913217-913300:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:915960-916403:1:exon

MBD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: MBD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methyl-CpG-binding domain protein 1 isoform X2
translation: MGTVRDCGTAAGLWSGAGSLREPSGETRPPQRRMAEGWAECPALGPGWQRREAFRKSGATSGRSDTYYRSPTGQKFRSKIELRRFLGPGHDLSNFDFKSGLQRPSHTRTKKAPKWHLPTVPLPEPPKIFKKEEMEVVGGAETVKAPPLSHEAPPSSFPALPIPIQATPLSLEATPPSDPTLRRTRKRPPLEPPQDGVVALCASCHTLFPGVSLPPQRRCRWLCPDCRAQRRDFNREQRFYKRVGCGSCQACRIPEDCGICSACARNPPGAPAGPGRAPKCLLRRCLRIVKKGLGCGSCSGCLSTEDCGSCCICLRRLQPGLKRQWRCLRRRCLRPKKARAAKKSQSPLPLTEKWKPPMEREPSDASSSRHRILTKGKEKKKPGRPPKPPGPRGRGVRSRASRRCGVCAACRRPADCGRCDFCRDKPKFGGQNLKRQKCRWRQCLRCAMDKEELLGGAENSPGPLPGPPLRLCPIKEEAGPLPRLEVRPPGRLGPSLDTWDPPVTPPAPQDPRLGLLIASAPRLKGAPPEPSAAPQRPPPGDLGVLIAATPRVKQEQPQPSASLVPVPPSAPLVVLDESEEEEEEEEEEGGNRVPFPLPPAPQLWPGSFLEELAEIPLPAHWGVVGADGGPGPCPARGLRLVQRCPRSSMAAAAVLLNPGLAFRVLVARGRPVPPGHEVLARRPPLRSVLDLVELLCDLEAYGPCPGPPGPPGRPPAPRCHVLVRGGRSCRPCQLLAGEGH
SIO_010081: MBD1
subclass of: SO_0000673
so part of: MBD1
location: join(902732..902818,903408..903529,903974..904088,904387..904658,905517..905602,905975..906015,906238..906387,909283..909417,909510..909557,910521..910577,910666..910731,911511..911675,912685..912948,913033..913119,913217..913300,915960..916403)
location: region:902732-916403:1
so has part: feature:902732-902818:1:exon
so has part: feature:903408-903529:1:exon
so has part: feature:903974-904088:1:exon
so has part: feature:904387-904658:1:exon
so has part: feature:905517-905602:1:exon
so has part: feature:905975-906015:1:exon
so has part: feature:906238-906387:1:exon
so has part: feature:909283-909417:1:exon
so has part: feature:909510-909557:1:exon
so has part: feature:910521-910577:1:exon
so has part: feature:910666-910731:1:exon
so has part: feature:911511-911675:1:exon
so has part: feature:912685-912948:1:exon
so has part: feature:913033-913119:1:exon
so has part: feature:913217-913300:1:exon
so has part: feature:915960-916403:1:exon

XP_032939442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:902732-902818:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:903408-903529:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:903974-904088:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:904387-904658:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:905517-905602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:905975-906015:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:906238-906387:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:909283-909417:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:909510-909557:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:910521-910577:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:910666-910731:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:911511-911675:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:912685-912948:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:913033-913119:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:913217-913300:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:915960-916403:1:exon

MBD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: MBD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methyl-CpG-binding domain protein 1 isoform X5
translation: MGTVRDCGTAAGLWSGAGSLREPSGETRPPQRRMAEGWAECPALGPGWQRREAFRKSGATSGRSDTYYRSPTGQKFRSKIELRRFLGPGHDLSNFDFKSGLQRPSHTRTKKAPKWHLPTVPLPEPPKIFKKEEMEVVGGAETVKAPPLSHEAPPSSFPALPIPIQATPLSLEATPPSDPTLRRTRKRPPLEPPQDGVVALCASCHTLFPGVSLPPQRRCRWLCPDCRAQRRDFNREQRFYKRVGCGSCQACRIPEDCGICSACARNPPGAPAGPGRAPKCLLRRCLRIVKKGLGCGSCSGCLSTEDCGSCCICLRRLQPGLKRQWRCLRRRCLRPKKARAAKKSQSPLPLTEKWKPPMEREPSDASSSRHRILTKGKEKKKPGRPPKPPGPRGDKEELLGGAENSPGPLPGPPLRLCPIKEEAGPLPRLEVRPPGRLGPSLDTWDPPVTPPAPQDPRLGLLIASAPRLKGAPPEPSAAPQRPPPGDLGVLIAATPRVKQEQPQPSASLVPVPPSAPLVVLDESEEEEEEEEEEGGNRVPFPLPPAPQLWPGSFLEELAEIPLPAHWGVVGADGGPGPCPARGLRLVQRCPRSSMAAAAVLLNPGLAFRVLVARGRPVPPGHEVLARRPPLRSVLDLVELLCDLEAYGPCPGPPGPPGRPPAPRCHVLVRGGRSCRPCQLLAGEGH
SIO_010081: MBD1
subclass of: SO_0000673
so part of: MBD1
location: join(902732..902818,903408..903529,903974..904088,904387..904658,905517..905602,905975..906015,906238..906387,909283..909417,909510..909557,910521..910577,910666..910731,912685..912948,913033..913119,913217..913300,915960..916403)
location: region:902732-916403:1
so has part: feature:902732-902818:1:exon
so has part: feature:903408-903529:1:exon
so has part: feature:903974-904088:1:exon
so has part: feature:904387-904658:1:exon
so has part: feature:905517-905602:1:exon
so has part: feature:905975-906015:1:exon
so has part: feature:906238-906387:1:exon
so has part: feature:909283-909417:1:exon
so has part: feature:909510-909557:1:exon
so has part: feature:910521-910577:1:exon
so has part: feature:910666-910731:1:exon
so has part: feature:912685-912948:1:exon
so has part: feature:913033-913119:1:exon
so has part: feature:913217-913300:1:exon
so has part: feature:915960-916403:1:exon

XP_032939445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:902732-902818:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:903408-903529:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:903974-904088:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:904387-904658:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:905517-905602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:905975-906015:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:906238-906387:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:909283-909417:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:909510-909557:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:910521-910577:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:910666-910731:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:912685-912948:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:913033-913119:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:913217-913300:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:915960-916403:1:exon

MBD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: MBD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methyl-CpG-binding domain protein 1 isoform X6
translation: MGTVRDCGTAAGLWSGAGSLREPSGETRPPQRRMAEGWAECPALGPGWQRREAFRKSGATSGRSDTYYRSPTGQKFRSKIELRRFLGPGHDLSNFDFKSGLQRPSHTRTKKAPKWHLPTVPLPEPPKIFKKEEMEVVGGAETVKAPPLSHEAPPSSFPALPIPIQATPLSLEATPPSDPTLRRTRKRPPLEPPQDGVVALCASCHTLFPGVSLPPQRRCRWLCPDCRAQRRDFNREQRFYKRVGCGSCQACRIPEDCGICSACARNPPGAPAGPGRAPKCLLRRCLRIVKKGLGCGSCSGCLSTEDCGSCCICLRRLQPGLKRQWRCLRRRCLRPKKARAAKKSQSPLPLTEKWKPPMEREPSDASSSRHRDKEELLGGAENSPGPLPGPPLRLCPIKEEAGPLPRLEVRPPGRLGPSLDTWDPPVTPPAPQDPRLGLLIASAPRLKGAPPEPSAAPQRPPPGDLGVLIAATPRVKQEQPQPSASLVPVPPSAPLVVLDESEEEEEEEEEEGGNRVPFPLPPAPQLWPGSFLEELAEIPLPAHWGVVGADGGPGPCPARGLRLVQRCPRSSMAAAAVLLNPGLAFRVLVARGRPVPPGHEVLARRPPLRSVLDLVELLCDLEAYGPCPGPPGPPGRPPAPRCHVLVRGGRSCRPCQLLAGEGH
SIO_010081: MBD1
subclass of: SO_0000673
so part of: MBD1
location: join(902732..902818,903408..903529,903974..904088,904387..904658,905517..905602,905975..906015,906238..906387,909283..909417,909510..909557,910521..910577,912685..912948,913033..913119,913217..913300,915960..916403)
location: region:902732-916403:1
so has part: feature:902732-902818:1:exon
so has part: feature:903408-903529:1:exon
so has part: feature:903974-904088:1:exon
so has part: feature:904387-904658:1:exon
so has part: feature:905517-905602:1:exon
so has part: feature:905975-906015:1:exon
so has part: feature:906238-906387:1:exon
so has part: feature:909283-909417:1:exon
so has part: feature:909510-909557:1:exon
so has part: feature:910521-910577:1:exon
so has part: feature:912685-912948:1:exon
so has part: feature:913033-913119:1:exon
so has part: feature:913217-913300:1:exon
so has part: feature:915960-916403:1:exon

XP_032939446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:902732-902818:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:903408-903529:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:903974-904088:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:904387-904658:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:905517-905602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:905975-906015:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:906238-906387:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:909283-909417:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:909510-909557:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:910521-910577:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:912685-912948:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:913033-913119:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:913217-913300:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:915960-916403:1:exon

MBD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: MBD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methyl-CpG-binding domain protein 1 isoform X3
translation: MGTPQRRMAEGWAECPALGPGWQRREAFRKSGATSGRSDTYYRSPTGQKFRSKIELRRFLGPGHDLSNFDFKSGLQRPSHTRTKKAPKWHLPTVPLPEPPKIFKKEEMEVVGGAETVKAPPLSHEAPPSSFPALPIPIQATPLSLEATPPSDPTLRRTRKRPPLEPPQDGVVALCASCHTLFPGVSLPPQRRCRWLCPDCRAQRRDFNREQRFYKRVGCGSCQACRIPEDCGICSACARNPPGAPAGPGRAPKCLLRRCLRIVKKGLGCGSCSGCLSTEDCGSCCICLRRLQPGLKRQWRCLRRRCLRPKKARAAKKSQSPLPLTEKWKPPMEREPSDASSSRHRKILTKGKEKKKPGRPPKPPGPRGRGVRSRASRRCGVCAACRRPADCGRCDFCRDKPKFGGQNLKRQKCRWRQCLRCAMDKEELLGGAENSPGPLPGPPLRLCPIKEEAGPLPRLEVRPPGRLGPSLDTWDPPVTPPAPQDPRLGLLIASAPRLKGAPPEPSAAPQRPPPGDLGVLIAATPRVKQEQPQPSASLVPVPPSAPLVVLDESEEEEEEEEEEGGNRVPFPLPPAPQLWPGSFLEELAEIPLPAHWGVVGADGGPGPCPARGLRLVQRCPRSSMAAAAVLLNPGLAFRVLVARGRPVPPGHEVLARRPPLRSVLDLVELLCDLEAYGPCPGPPGPPGRPPAPRCHVLVRGGRSCRPCQLLAGEGH
SIO_010081: MBD1
subclass of: SO_0000673
so part of: MBD1
location: join(902732..902740,903408..903529,903974..904088,904387..904658,905517..905602,905975..906015,906238..906387,909283..909417,909510..909557,910521..910577,910663..910731,911511..911675,912685..912948,913033..913119,913217..913300,915960..916403)
location: region:902732-916403:1
so has part: feature:902732-902740:1:exon
so has part: feature:903408-903529:1:exon
so has part: feature:903974-904088:1:exon
so has part: feature:904387-904658:1:exon
so has part: feature:905517-905602:1:exon
so has part: feature:905975-906015:1:exon
so has part: feature:906238-906387:1:exon
so has part: feature:909283-909417:1:exon
so has part: feature:909510-909557:1:exon
so has part: feature:910521-910577:1:exon
so has part: feature:910663-910731:1:exon
so has part: feature:911511-911675:1:exon
so has part: feature:912685-912948:1:exon
so has part: feature:913033-913119:1:exon
so has part: feature:913217-913300:1:exon
so has part: feature:915960-916403:1:exon

XP_032939443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:902732-902740:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:903408-903529:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:903974-904088:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:904387-904658:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:905517-905602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:905975-906015:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:906238-906387:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:909283-909417:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:909510-909557:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:910521-910577:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:910663-910731:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:911511-911675:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:912685-912948:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:913033-913119:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:913217-913300:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:915960-916403:1:exon

LOC117009317
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009317
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(917514..919726)
location: region:917514-919726:-1
so has part: feature:917514-919726:-1:exon
subclass of: SO_0000010

117009317
type: Gene
SIO_000068: ncbigene

position:917514:-1
position: 917514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919726:-1
position: 919726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:917514-919726:-1:exon

LOC117009317
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009317
product: activator of basal transcription 1-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083556.1
SIO_010081: LOC117009317
subclass of: SO_0000673
so part of: LOC117009317
location: complement(join(917514..917967,918792..918970,919225..919530,919656..919726))
location: region:917514-919726:-1
so has part: feature:919656-919726:-1:exon
so has part: feature:919225-919530:-1:exon
so has part: feature:918792-918970:-1:exon
so has part: feature:917514-917967:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:919656-919726:-1:exon

position:919656:-1
position: 919656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:919225-919530:-1:exon

position:919225:-1
position: 919225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919530:-1
position: 919530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:918792-918970:-1:exon

position:918792:-1
position: 918792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:918970:-1
position: 918970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:917514-917967:-1:exon

position:917967:-1
position: 917967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009317
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009317
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: activator of basal transcription 1-like
translation: MAGAERDLHGRGEEEEEEEEEEEEEEEEEEKEEEEEEEKEEEEDGPEGSPAAEAPSDPPSKPVVPGVLYLSFLPPGFGPRQARALLRPHGELGRVFLQPRGGSVRRRRQRPGGPPAVAFAEGWVEFRDKRAAKRAAKILHGAPMAPRPRSPFRHHCWSIKYLPGFRWPHLSERLSYERQVRAQRLRAEVAQAKREGGFYTQRASKMAKEPPKTSGDPARPSPTWGFAQRPTEEEIWRRKARPPPAAPPQSLLEKVFGIGR
SIO_010081: LOC117009317
subclass of: SO_0000673
so part of: LOC117009317
location: complement(join(917665..917967,918792..918970,919225..919525))
location: region:917665-919525:-1
so has part: feature:919225-919525:-1:exon
so has part: feature:918792-918970:-1:exon
so has part: feature:917665-917967:-1:exon

XP_032939447.1
type: Protein
SIO_000068: ncbiprotein

position:917665:-1
position: 917665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919525:-1
position: 919525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:919225-919525:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:918792-918970:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:917665-917967:-1:exon

LOC117009223
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009223
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 922490..949679
location: region:922490-949679:1
so has part: feature:922490-949679:1:exon
subclass of: SO_0000010

117009223
type: Gene
SIO_000068: ncbigene

position:922490:1
position: 922490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949679:1
position: 949679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:922490-949679:1:exon

LOC117009223
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117009223
product: metabotropic glutamate receptor 6-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins, and 42% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033083462.1
SIO_010081: LOC117009223
subclass of: SO_0000673
so part of: LOC117009223
location: join(922490..922753,924015..924201,928004..928220,930656..930791,932910..933064,934917..935078,937189..937386,939454..939590,941904..942447,944049..944440,949530..949679)
location: region:922490-949679:1
so has part: feature:922490-922753:1:exon
so has part: feature:924015-924201:1:exon
so has part: feature:928004-928220:1:exon
so has part: feature:930656-930791:1:exon
so has part: feature:932910-933064:1:exon
so has part: feature:934917-935078:1:exon
so has part: feature:937189-937386:1:exon
so has part: feature:939454-939590:1:exon
so has part: feature:941904-942447:1:exon
so has part: feature:944049-944440:1:exon
so has part: feature:949530-949679:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:922490-922753:1:exon

position:922753:1
position: 922753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:924015-924201:1:exon

position:924015:1
position: 924015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924201:1
position: 924201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:928004-928220:1:exon

position:928004:1
position: 928004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:928220:1
position: 928220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:930656-930791:1:exon

position:930656:1
position: 930656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:930791:1
position: 930791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:932910-933064:1:exon

position:932910:1
position: 932910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:933064:1
position: 933064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:934917-935078:1:exon

position:934917:1
position: 934917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:935078:1
position: 935078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:937189-937386:1:exon

position:937189:1
position: 937189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:937386:1
position: 937386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:939454-939590:1:exon

position:939454:1
position: 939454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:939590:1
position: 939590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:941904-942447:1:exon

position:941904:1
position: 941904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:942447:1
position: 942447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:944049-944440:1:exon

position:944049:1
position: 944049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:944440:1
position: 944440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:949530-949679:1:exon

position:949530:1
position: 949530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117009223
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117009223
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metabotropic glutamate receptor 6-like
translation: MLYALDRVNGDPRVLPNLTLGARILDTCSRDTYALEQALSFVRSLLPPEGGEGSCPDGSAPRRPPPERLVGVIGASASSVSIMVANVLRLFAIPQISYASTAPELSDPGRYEFFSRVVPPDSYQAQAMVAVVRALGWSYVSTLASEGNYGESGVEAFVQSSREAGGLCIAQSIKIPREPKPGEFAKVIGRLMETSTARGVVLFANEDDIRHVLEAAMLANLSGHFSWVGSDSWGAKMAPVQGLEEAAHGAITILPKRASVPGFDEYFTSRSLENNRRNLWFHEFWEDDFNCRLPHGTAAHGDPAGAGGVPVRKCTGRERIGRDSPYEQEGKVQFVIDAVLAMAHGLHSMLGEACPGGGLCAHMDPPDGRRLLTHIRRVAFNGSAGTPVSFNENGDAPGRYDIFQFQGGNGTGAYRAVGQWVQGLHLQEDAMAWGTNSSSPPPSVCSLPCGPGERKKPVKGVPCCWHCELCGGYQYRADLLTCLPCAPHLRPTPNRTACRPTPVLRLRWGDPCAAVPLALATLGLMATAFVLATFVRHHETPIVKASGRELSYVLLAGIALVYAITFLMVAEPGVGVCALRRLFLGMGMSLTYAALLTKTNRIYRIFEQGKRSVTPPRFISPTSQLVITFTLSGLQLVAAATWLLVRPPHALIDYEMGRTPDPEAARGVLRCDMAEGATLACLAYALLLMLTCTVYAVKARGVPETFNEAKPIGFAMYTTCVVWLAFGPIFFGAAQSAERVHVQTATLTVSMSLSASVPLGLLYAPKVYVILLHPERNQPKRPRADPPP
SIO_010081: LOC117009223
subclass of: SO_0000673
so part of: LOC117009223
location: join(922665..922753,924015..924201,928004..928220,930656..930791,932910..933064,934917..935078,937189..937386,939454..939590,941904..942447,944049..944440,949530..949679)
location: region:922665-949679:1
so has part: feature:922665-922753:1:exon
so has part: feature:924015-924201:1:exon
so has part: feature:928004-928220:1:exon
so has part: feature:930656-930791:1:exon
so has part: feature:932910-933064:1:exon
so has part: feature:934917-935078:1:exon
so has part: feature:937189-937386:1:exon
so has part: feature:939454-939590:1:exon
so has part: feature:941904-942447:1:exon
so has part: feature:944049-944440:1:exon
so has part: feature:949530-949679:1:exon

XP_032939353.1
type: Protein
SIO_000068: ncbiprotein

position:922665:1
position: 922665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:922665-922753:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:924015-924201:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:928004-928220:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:930656-930791:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:932910-933064:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:934917-935078:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:937189-937386:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:939454-939590:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:941904-942447:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:944049-944440:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:949530-949679:1:exon

LOC117009406
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009406
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(949934..952546)
location: region:949934-952546:-1
so has part: feature:949934-952546:-1:exon
subclass of: SO_0000011

117009406
type: Gene
SIO_000068: ncbigene

position:949934:-1
position: 949934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:952546:-1
position: 952546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:949934-952546:-1:exon

LOC117009406
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117009406
product: uncharacterized LOC117009406
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004420471.1
SIO_010081: LOC117009406
subclass of: SO_0000673
so part of: LOC117009406
location: complement(join(949934..949963,951169..951325,952447..952546))
location: region:949934-952546:-1
so has part: feature:952447-952546:-1:exon
so has part: feature:951169-951325:-1:exon
so has part: feature:949934-949963:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:952447-952546:-1:exon

position:952447:-1
position: 952447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:951169-951325:-1:exon

position:951169:-1
position: 951169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:951325:-1
position: 951325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:949934-949963:-1:exon

position:949963:-1
position: 949963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117009287
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117009287
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(961577..962216)
location: region:961577-962216:-1
so has part: feature:961577-962216:-1:exon
subclass of: SO_0000011

117009287
type: Gene
SIO_000068: ncbigene

position:961577:-1
position: 961577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:962216:-1
position: 962216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:961577-962216:-1:exon

LOC117009287
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117009287
product: uncharacterized LOC117009287
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_004420453.2
SIO_010081: LOC117009287
subclass of: SO_0000673
so part of: LOC117009287
location: complement(join(961577..961764,962175..962216))
location: region:961577-962216:-1
so has part: feature:962175-962216:-1:exon
so has part: feature:961577-961764:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:962175-962216:-1:exon

position:962175:-1
position: 962175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:961577-961764:-1:exon

position:961764:-1
position: 961764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WNK3
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: WNK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 966963..997809
location: region:966963-997809:1
so has part: feature:966963-997809:1:exon
subclass of: SO_0000010

117009224
type: Gene
SIO_000068: ncbigene

position:966963:1
position: 966963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:997809:1
position: 997809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:966963-997809:1:exon

WNK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: WNK3
product: WNK lysine deficient protein kinase 3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033083463.2
SIO_010081: WNK3
subclass of: SO_0000673
so part of: WNK3
location: join(966963..967295,969913..970085,970150..970370,970435..970592,972391..972479,975759..975978,977477..977687,978453..978583,978657..978957,979102..980183,980262..980378,981874..981984,982063..982090,982160..982243,983329..984143,986117..986219,987943..987989,990462..990664,993579..993790,995116..995234,996177..997809)
location: region:966963-997809:1
so has part: feature:966963-967295:1:exon
so has part: feature:969913-970085:1:exon
so has part: feature:970150-970370:1:exon
so has part: feature:970435-970592:1:exon
so has part: feature:972391-972479:1:exon
so has part: feature:975759-975978:1:exon
so has part: feature:977477-977687:1:exon
so has part: feature:978453-978583:1:exon
so has part: feature:978657-978957:1:exon
so has part: feature:979102-980183:1:exon
so has part: feature:980262-980378:1:exon
so has part: feature:981874-981984:1:exon
so has part: feature:982063-982090:1:exon
so has part: feature:982160-982243:1:exon
so has part: feature:983329-984143:1:exon
so has part: feature:986117-986219:1:exon
so has part: feature:987943-987989:1:exon
so has part: feature:990462-990664:1:exon
so has part: feature:993579-993790:1:exon
so has part: feature:995116-995234:1:exon
so has part: feature:996177-997809:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:966963-967295:1:exon

position:967295:1
position: 967295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:969913-970085:1:exon