Catharus ustulatus isolate bCatUst1 chromosome 26, bCatUst1.pri.v2, whole genome shotgun sequence.
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Turdidae; Catharus.
REFSEQ INFORMATION: The reference sequence is identical to\nCM020361.1.\nAssembly name: bCatUst1.pri.v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/12/22. The original whole-genome shotgun project has the\naccession WNMQ00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 06-AUG-2020\nAssembly Method :: FALCON v. DX 1.9.0; FALCON-Unzip v.\n 6.0.0.47841; purge_dups github v.\n purge_haplotig (bitbucket v1.0.3+\n 1.Nov.2018); Scaff10x v. 2; Bionano Solve\n v. 3.2.1_04122018; Salsa2 HiC v. 2.2;\n Arrow polishing and gap filling v.\n Smrtlink_6.0.0.47841; Longranger Align v.\n 2.2.2; freebayes v. 1.3.1; gEVAL manual\n curation v. 2020-08-06; VGP assembly\n pipeline v. 1.5\nAssembly Name :: bCatUst1.pri.v2\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 60.58x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Catharus ustulatus Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: Gnomon.
potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC117007552, transcript variant X5
COORDINATES: polyA evidence [ECO:0006239]
uncharacterized LOC117007552, transcript variant X6
uncharacterized LOC117007552, transcript variant X7
uncharacterized LOC117007552, transcript variant X3
uncharacterized LOC117007552, transcript variant X1
uncharacterized LOC117007552, transcript variant X4
uncharacterized LOC117007552, transcript variant X2
uncharacterized LOC117007552, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
YTH N6-methyladenosine RNA binding protein 2, transcript variant X1
YTH N6-methyladenosine RNA binding protein 2, transcript variant X2
YTH domain-containing family protein 2 isoform X1
YTH domain-containing family protein 2 isoform X2
glucocorticoid modulatory element binding protein 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
glucocorticoid modulatory element binding protein 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
glucocorticoid modulatory element binding protein 1, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
glucocorticoid modulatory element-binding protein 1 isoform X1
glucocorticoid modulatory element-binding protein 1 isoform X2
discoidin, CUB and LCCL domain-containing protein 1-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: discoidin, CUB and LCCL domain-containing protein 1-like
TATA-box binding protein associated factor 12, transcript variant X1
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF00548
TATA-box binding protein associated factor 12, transcript variant X2
transcription initiation factor TFIID subunit 12
RAB42, member RAS oncogene family, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
RAB42, member RAS oncogene family, transcript variant X2
RAB42, member RAS oncogene family, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
uncharacterized LOC117007683, transcript variant X2
uncharacterized LOC117007683, transcript variant X1
uncharacterized LOC117007683, transcript variant X3
COORDINATES: nucleotide motif:Rfam:12.0:RF00608
COORDINATES: nucleotide motif:Rfam:12.0:RF00420
COORDINATES: nucleotide motif:Rfam:12.0:RF00405
small nucleolar RNA SNORA16B/SNORA16A family
COORDINATES: nucleotide motif:Rfam:12.0:RF00190
tRNA selenocysteine 1 associated protein 1, transcript variant X1
tRNA selenocysteine 1 associated protein 1, transcript variant X2
tRNA selenocysteine 1-associated protein 1 isoform X1
tRNA selenocysteine 1-associated protein 1 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
erythrocyte membrane protein band 4.1, transcript variant X1
erythrocyte membrane protein band 4.1, transcript variant X18
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
erythrocyte membrane protein band 4.1, transcript variant X13
erythrocyte membrane protein band 4.1, transcript variant X17
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
erythrocyte membrane protein band 4.1, transcript variant X20
erythrocyte membrane protein band 4.1, transcript variant X2
erythrocyte membrane protein band 4.1, transcript variant X3
erythrocyte membrane protein band 4.1, transcript variant X19
erythrocyte membrane protein band 4.1, transcript variant X4
erythrocyte membrane protein band 4.1, transcript variant X5
erythrocyte membrane protein band 4.1, transcript variant X10
erythrocyte membrane protein band 4.1, transcript variant X8
erythrocyte membrane protein band 4.1, transcript variant X9
erythrocyte membrane protein band 4.1, transcript variant X6
erythrocyte membrane protein band 4.1, transcript variant X7
erythrocyte membrane protein band 4.1, transcript variant X11
erythrocyte membrane protein band 4.1, transcript variant X15
erythrocyte membrane protein band 4.1, transcript variant X12
erythrocyte membrane protein band 4.1, transcript variant X14
erythrocyte membrane protein band 4.1, transcript variant X16
transmembrane protein 200B, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transmembrane protein 200B, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
lethal(3)malignant brain tumor-like protein 3, transcript variant X5
lethal(3)malignant brain tumor-like protein 3, transcript variant X6
lethal(3)malignant brain tumor-like protein 3, transcript variant X3
lethal(3)malignant brain tumor-like protein 3, transcript variant X1
lethal(3)malignant brain tumor-like protein 3, transcript variant X2
lethal(3)malignant brain tumor-like protein 3, transcript variant X4
lethal(3)malignant brain tumor-like protein 3, transcript variant X7
lethal(3)malignant brain tumor-like protein 4 isoform X5
lethal(3)malignant brain tumor-like protein 4 isoform X4
lethal(3)malignant brain tumor-like protein 4 isoform X2
lethal(3)malignant brain tumor-like protein 4 isoform X1
lethal(3)malignant brain tumor-like protein 4 isoform X3
lethal(3)malignant brain tumor-like protein 3 isoform X6
serine and arginine rich splicing factor 4
mitochondrial trans-2-enoyl-CoA reductase, transcript variant X1
mitochondrial trans-2-enoyl-CoA reductase, transcript variant X4
mitochondrial trans-2-enoyl-CoA reductase, transcript variant X2
mitochondrial trans-2-enoyl-CoA reductase, transcript variant X3
enoyl-[acyl-carrier-protein] reductase, mitochondrial isoform X1
enoyl-[acyl-carrier-protein] reductase, mitochondrial isoform X2
protein tyrosine phosphatase receptor type U, transcript variant X1
protein tyrosine phosphatase receptor type U, transcript variant X2
protein tyrosine phosphatase receptor type U, transcript variant X3
protein tyrosine phosphatase receptor type U, transcript variant X4
receptor-type tyrosine-protein phosphatase U isoform X1
receptor-type tyrosine-protein phosphatase U isoform X2
receptor-type tyrosine-protein phosphatase U isoform X3
receptor-type tyrosine-protein phosphatase U isoform X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
lysosomal protein transmembrane 5, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
lysosomal protein transmembrane 5, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
lysosomal-associated transmembrane protein 5 isoform X2
lysosomal-associated transmembrane protein 5 isoform X1
uncharacterized LOC117007654, transcript variant X1
uncharacterized LOC117007654, transcript variant X2
pumilio RNA binding family member 1, transcript variant X6
pumilio RNA binding family member 1, transcript variant X3
pumilio RNA binding family member 1, transcript variant X5
pumilio RNA binding family member 1, transcript variant X2
pumilio RNA binding family member 1, transcript variant X4
pumilio RNA binding family member 1, transcript variant X1
COORDINATES: nucleotide motif:Rfam:12.0:RF00188
sodium/potassium transporting ATPase interacting 1
sodium/potassium-transporting ATPase subunit beta-1-interacting protein 1
small nuclear ribonucleoprotein U5 subunit 40
U5 small nuclear ribonucleoprotein 40 kDa protein
cAMP-dependent protein kinase inhibitor beta-like, transcript variant X2
cAMP-dependent protein kinase inhibitor beta-like, transcript variant X1
cAMP-dependent protein kinase inhibitor beta-like
HIVEP zinc finger 3, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
HIVEP zinc finger 3, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
HIVEP zinc finger 3, transcript variant X3
HIVEP zinc finger 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
HIVEP zinc finger 3, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
HIVEP zinc finger 3, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
HIVEP zinc finger 3, transcript variant X7
Scm polycomb group protein homolog 1, transcript variant X1
Scm polycomb group protein homolog 1, transcript variant X2
Scm polycomb group protein homolog 1, transcript variant X3
Scm polycomb group protein homolog 1, transcript variant X4
Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4
protein phosphatase 1 regulatory subunit 8
nuclear inhibitor of protein phosphatase 1
COORDINATES: nucleotide motif:Rfam:12.0:RF00553
sphingomyelin phosphodiesterase acid like 3B, transcript variant X1
sphingomyelin phosphodiesterase acid like 3B, transcript variant X2
acid sphingomyelinase-like phosphodiesterase 3b isoform X1
acid sphingomyelinase-like phosphodiesterase 3b isoform X2
EYA transcriptional coactivator and phosphatase 3, transcript variant X4
EYA transcriptional coactivator and phosphatase 3, transcript variant X1
EYA transcriptional coactivator and phosphatase 3, transcript variant X2
EYA transcriptional coactivator and phosphatase 3, transcript variant X3
platelet activating factor receptor, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
platelet activating factor receptor, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
DnaJ heat shock protein family (Hsp40) member C8
ATP synthase inhibitory factor subunit 1
heterogeneous nuclear ribonucleoprotein R, transcript variant X3
heterogeneous nuclear ribonucleoprotein R, transcript variant X1
heterogeneous nuclear ribonucleoprotein R, transcript variant X2
heterogeneous nuclear ribonucleoprotein R, transcript variant X4
heterogeneous nuclear ribonucleoprotein R isoform X1
heterogeneous nuclear ribonucleoprotein R isoform X2
heterogeneous nuclear ribonucleoprotein R isoform X3
heterogeneous nuclear ribonucleoprotein R isoform X4
uncharacterized LOC117007619, transcript variant X1
uncharacterized LOC117007619, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
leucine zipper protein 1, transcript variant X1
leucine zipper protein 1, transcript variant X2
NF-kappa-B inhibitor delta, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
NF-kappa-B inhibitor delta, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 16 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments
POU domain, class 3, transcription factor 1
UTP11 small subunit processome component
probable U3 small nucleolar RNA-associated protein 11
four and a half LIM domains 3, transcript variant X2
four and a half LIM domains 3, transcript variant X1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: type II inositol 1,4,5-trisphosphate 5-phosphatase
metal regulatory transcription factor 1, transcript variant X1
metal regulatory transcription factor 1, transcript variant X2
yrdC N6-threonylcarbamoyltransferase domain containing
yrdC domain-containing protein, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
uncharacterized protein C1orf109 homolog
dynein axonemal light intermediate chain 1, transcript variant X1
dynein axonemal light intermediate chain 1, transcript variant X2
axonemal dynein light intermediate polypeptide 1 isoform X2
axonemal dynein light intermediate polypeptide 1 isoform X1
Smad nuclear interacting protein 1, transcript variant X1
Smad nuclear interacting protein 1, transcript variant X2
MYST/Esa1 associated factor 6, transcript variant X1
MYST/Esa1 associated factor 6, transcript variant X3
MYST/Esa1 associated factor 6, transcript variant X2
MYST/Esa1 associated factor 6, transcript variant X5
MYST/Esa1 associated factor 6, transcript variant X4
chromatin modification-related protein MEAF6 isoform X1
chromatin modification-related protein MEAF6 isoform X2
chromatin modification-related protein MEAF6 isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 91% coverage of the annotated genomic feature by RNAseq alignments
glutamate ionotropic receptor kainate type subunit 3
glutamate receptor ionotropic, kainate 3
colony stimulating factor 3 receptor, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
colony stimulating factor 3 receptor, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
colony stimulating factor 3 receptor, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
granulocyte colony-stimulating factor receptor isoform X1
granulocyte colony-stimulating factor receptor isoform X2
28S ribosomal protein S15, mitochondrial
organic solute carrier partner 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
organic solute carrier partner 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
LSM10, U7 small nuclear RNA associated, transcript variant X1
LSM10, U7 small nuclear RNA associated, transcript variant X2
U7 snRNA-associated Sm-like protein LSm10
serine/threonine kinase 40, transcript variant X2
serine/threonine kinase 40, transcript variant X1
CD2-associated protein-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
uncharacterized protein LOC117007397 isoform X2
CD2-associated protein-like, transcript variant X1
thyroid hormone receptor associated protein 3
thyroid hormone receptor-associated protein 3
MAP7 domain containing 1, transcript variant X2
MAP7 domain containing 1, transcript variant X3
MAP7 domain containing 1, transcript variant X4
MAP7 domain containing 1, transcript variant X1
MAP7 domain-containing protein 1 isoform X3
MAP7 domain-containing protein 1 isoform X1
MAP7 domain-containing protein 1 isoform X2
beta-xylosidase/alpha-L-arabinofuranosidase 2-like
trafficking protein particle complex subunit 3, transcript variant X1
trafficking protein particle complex subunit 3, transcript variant X2
trafficking protein particle complex subunit 3 isoform X1
trafficking protein particle complex subunit 3 isoform X2
collagen type VIII alpha 2 chain, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
collagen type VIII alpha 2 chain, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
collagen type VIII alpha 2 chain, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
protein argonaute-1, transcript variant X2
protein argonaute-1, transcript variant X1
protein argonaute-4, transcript variant X2
protein argonaute-4, transcript variant X1
chromosome 26 C1orf216 homolog, transcript variant X2
chromosome 26 C1orf216 homolog, transcript variant X1
UPF0500 protein C1orf216 homolog isoform X1
UPF0500 protein C1orf216 homolog isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
dyslexia-associated protein KIAA0319-like protein homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
ice-structuring protein 4-like, transcript variant X1
ice-structuring protein 4-like, transcript variant X2
ice-structuring protein 4-like, transcript variant X3
ice-structuring protein 4-like isoform X1
ice-structuring protein 4-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
interferon alpha-inducible protein 27-like protein 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
interferon alpha-inducible protein 27-like protein 2A
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 65% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
probable serine/threonine-protein kinase kinX
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
uncharacterized LOC117007505, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
uncharacterized LOC117007505, transcript variant X2
interferon alpha-inducible protein 27-like protein 2B
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
zinc finger MYM-type protein 4-like, transcript variant X1
zinc finger MYM-type protein 4-like, transcript variant X7
zinc finger MYM-type protein 4-like, transcript variant X6
zinc finger MYM-type protein 4-like, transcript variant X5
zinc finger MYM-type protein 4-like, transcript variant X2
zinc finger MYM-type protein 4-like, transcript variant X4
zinc finger MYM-type protein 4-like, transcript variant X3
zinc finger MYM-type protein 4-like, transcript variant X8
zinc finger MYM-type protein 4-like isoform X7
zinc finger MYM-type protein 4-like isoform X6
zinc finger MYM-type protein 4-like isoform X5
zinc finger MYM-type protein 4-like isoform X2
zinc finger MYM-type protein 4-like isoform X4
zinc finger MYM-type protein 4-like isoform X1
zinc finger MYM-type protein 4-like isoform X3
zinc finger MYM-type protein 4-like isoform X8
splicing factor, proline- and glutamine-rich-like, transcript variant X2
splicing factor, proline- and glutamine-rich-like, transcript variant X1
splicing factor, proline- and glutamine-rich-like isoform X2
splicing factor, proline- and glutamine-rich-like isoform X1
platelet-activating factor receptor-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
disks large-associated protein 3-like, transcript variant X1
disks large-associated protein 3-like, transcript variant X3
disks large-associated protein 3-like, transcript variant X2
disks large-associated protein 3-like isoform X1
disks large-associated protein 3-like isoform X2
small integral membrane protein 12-like, transcript variant X2
small integral membrane protein 12-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 76 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
gap junction beta-3 protein-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 68 Proteins, and 39% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
gap junction beta-3 protein-like isoform X2
gap junction beta-3 protein-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 69 Proteins, and 12% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
gap junction beta-3 protein-like isoform X1
gap junction beta-5 protein-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 72 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
gap junction beta-5 protein-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 72 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: UPF0500 protein C1orf216-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
dyslexia-associated protein KIAA0319-like protein
ice-structuring protein 4-like, transcript variant X4
ice-structuring protein 4-like, transcript variant X5
uncharacterized LOC117007501, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
uncharacterized LOC117007501, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
uncharacterized LOC117007501, transcript variant X3
uncharacterized LOC117007501, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
ice-structuring protein 4-like, transcript variant X6
pneumococcal serine-rich repeat protein-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 80% coverage of the annotated genomic feature by RNAseq alignments
interferon alpha-inducible protein 27-like protein 2A, transcript variant X1
interferon alpha-inducible protein 27-like protein 2A, transcript variant X2
interferon alpha-inducible protein 27-like protein 2A isoform X1
interferon alpha-inducible protein 27-like protein 2A isoform X2
splicing factor, proline- and glutamine-rich-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 67 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 67 Proteins, and 17% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 68 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 68 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
CUB and sushi domain-containing protein 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
CUB and sushi domain-containing protein 1-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 3 bases in 2 codons
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: CUB and sushi domain-containing protein 1-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: stromal membrane-associated protein 2
regulating synaptic membrane exocytosis 3, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
regulating synaptic membrane exocytosis 3, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
regulating synaptic membrane exocytosis 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
regulating synaptic membrane exocytosis protein 3
nuclear transcription factor Y subunit gamma
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
potassium voltage-gated channel subfamily Q member 4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 23 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
potassium voltage-gated channel subfamily KQT member 4
tubulointerstitial nephritis antigen like 1, transcript variant X2
tubulointerstitial nephritis antigen like 1, transcript variant X1
tubulointerstitial nephritis antigen-like
penta-EF-hand domain containing 1, transcript variant X2
penta-EF-hand domain containing 1, transcript variant X1
adhesion G protein-coupled receptor B2, transcript variant X7
adhesion G protein-coupled receptor B2, transcript variant X6
adhesion G protein-coupled receptor B2, transcript variant X5
adhesion G protein-coupled receptor B2, transcript variant X3
adhesion G protein-coupled receptor B2, transcript variant X4
adhesion G protein-coupled receptor B2, transcript variant X1
adhesion G protein-coupled receptor B2, transcript variant X2
adhesion G protein-coupled receptor B2, transcript variant X8
adhesion G protein-coupled receptor B2 isoform X6
adhesion G protein-coupled receptor B2 isoform X5
adhesion G protein-coupled receptor B2 isoform X4
adhesion G protein-coupled receptor B2 isoform X2
adhesion G protein-coupled receptor B2 isoform X3
adhesion G protein-coupled receptor B2 isoform X1
uncharacterized LOC117007681, transcript variant X4
uncharacterized LOC117007681, transcript variant X2
uncharacterized LOC117007681, transcript variant X3
uncharacterized LOC117007681, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
KH domain-containing, RNA-binding, signal transduction-associated protein 1-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: KH domain-containing, RNA-binding, signal transduction-associated protein 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
LOW QUALITY PROTEIN: protein tyrosine phosphatase type IVA 2
KH RNA binding domain containing, signal transduction associated 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
KH RNA binding domain containing, signal transduction associated 1, transcript variant X2
KH RNA binding domain containing, signal transduction associated 1, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
KH domain-containing, RNA-binding, signal transduction-associated protein 1 isoform X1
KH domain-containing, RNA-binding, signal transduction-associated protein 1 isoform X2
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
LOW QUALITY PROTEIN: histone deacetylase 1
LCK proto-oncogene, Src family tyrosine kinase
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 65 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
family with sequence similarity 167 member B
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
myotubularin-related protein 9-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
myotubularin-related protein 9-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
myotubularin-related protein 9-like isoform X2
myotubularin-related protein 9-like isoform X1
eukaryotic translation initiation factor 3 subunit I
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 87% coverage of the annotated genomic feature by RNAseq alignments
coiled-coil domain containing 28B, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
coiled-coil domain containing 28B, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
coiled-coil domain containing 28B, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
coiled-coil domain-containing protein 28B isoform X1
coiled-coil domain-containing protein 28B isoform X2
coiled-coil domain-containing protein 28B isoform X3
zinc finger and BTB domain containing 8B
zinc finger and BTB domain-containing protein 8B
zinc finger and BTB domain containing 8A, transcript variant X2
zinc finger and BTB domain containing 8A, transcript variant X1
zinc finger and BTB domain containing 8A, transcript variant X4
zinc finger and BTB domain containing 8A, transcript variant X3
zinc finger and BTB domain-containing protein 8A
zinc finger and BTB domain-containing protein 8A-like, transcript variant X4
zinc finger and BTB domain-containing protein 8A-like, transcript variant X1
zinc finger and BTB domain-containing protein 8A-like, transcript variant X2
zinc finger and BTB domain-containing protein 8A-like, transcript variant X3
zinc finger and BTB domain-containing protein 8A-like
zinc finger and BTB domain containing 8 opposite strand, transcript variant X1
zinc finger and BTB domain containing 8 opposite strand, transcript variant X2
zinc finger and BTB domain containing 8 opposite strand, transcript variant X3
RB binding protein 4, chromatin remodeling factor, transcript variant X1
RB binding protein 4, chromatin remodeling factor, transcript variant X2
histone-binding protein RBBP4 isoform X1
histone-binding protein RBBP4 isoform X2
RB binding protein 4, chromatin remodeling factor, transcript variant X3
histone-binding protein RBBP4 isoform X3
syncoilin, intermediate filament protein, transcript variant X4
syncoilin, intermediate filament protein, transcript variant X3
syncoilin, intermediate filament protein, transcript variant X2
syncoilin, intermediate filament protein, transcript variant X1
KIAA1522 ortholog, transcript variant X1
uncharacterized protein KIAA1522 homolog isoform X1
KIAA1522 ortholog, transcript variant X2
uncharacterized protein KIAA1522 homolog isoform X2
fibronectin type III domain containing 5
fibronectin type III domain-containing protein 5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 67 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 67 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
neuron-specific calcium-binding protein hippocalcin
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
adenylate kinase 2, transcript variant X2
adenylate kinase 2, mitochondrial isoform X2
adenylate kinase 2, transcript variant X1
adenylate kinase 2, mitochondrial isoform X1
NADH:ubiquinone oxidoreductase subunit S5
NADH dehydrogenase [ubiquinone] iron-sulfur protein 5
microtubule actin crosslinking factor 1, transcript variant X16
microtubule actin crosslinking factor 1, transcript variant X14
microtubule actin crosslinking factor 1, transcript variant X25
microtubule actin crosslinking factor 1, transcript variant X26
microtubule actin crosslinking factor 1, transcript variant X27
microtubule-actin cross-linking factor 1 isoform X16
microtubule-actin cross-linking factor 1 isoform X14
microtubule-actin cross-linking factor 1 isoform X25
microtubule-actin cross-linking factor 1 isoform X26
microtubule-actin cross-linking factor 1 isoform X27
microtubule actin crosslinking factor 1, transcript variant X21
microtubule-actin cross-linking factor 1 isoform X21
microtubule actin crosslinking factor 1, transcript variant X19
microtubule actin crosslinking factor 1, transcript variant X20
microtubule-actin cross-linking factor 1 isoform X19
microtubule-actin cross-linking factor 1 isoform X20
microtubule actin crosslinking factor 1, transcript variant X22
microtubule actin crosslinking factor 1, transcript variant X28
microtubule-actin cross-linking factor 1 isoform X22
microtubule-actin cross-linking factor 1 isoform X28
microtubule actin crosslinking factor 1, transcript variant X1
microtubule actin crosslinking factor 1, transcript variant X9
microtubule actin crosslinking factor 1, transcript variant X6
microtubule actin crosslinking factor 1, transcript variant X2
microtubule actin crosslinking factor 1, transcript variant X5
microtubule actin crosslinking factor 1, transcript variant X10
microtubule actin crosslinking factor 1, transcript variant X11
microtubule actin crosslinking factor 1, transcript variant X4
microtubule actin crosslinking factor 1, transcript variant X7
microtubule actin crosslinking factor 1, transcript variant X8
microtubule actin crosslinking factor 1, transcript variant X13
microtubule actin crosslinking factor 1, transcript variant X18
microtubule actin crosslinking factor 1, transcript variant X17
microtubule actin crosslinking factor 1, transcript variant X15
microtubule actin crosslinking factor 1, transcript variant X23
microtubule actin crosslinking factor 1, transcript variant X3
microtubule actin crosslinking factor 1, transcript variant X24
microtubule actin crosslinking factor 1, transcript variant X12
microtubule-actin cross-linking factor 1 isoform X1
microtubule-actin cross-linking factor 1 isoform X9
microtubule-actin cross-linking factor 1 isoform X6
microtubule-actin cross-linking factor 1 isoform X2
microtubule-actin cross-linking factor 1 isoform X5
microtubule-actin cross-linking factor 1 isoform X10
microtubule-actin cross-linking factor 1 isoform X11
microtubule-actin cross-linking factor 1 isoform X4
microtubule-actin cross-linking factor 1 isoform X7
microtubule-actin cross-linking factor 1 isoform X8
microtubule-actin cross-linking factor 1 isoform X13
microtubule-actin cross-linking factor 1 isoform X18
microtubule-actin cross-linking factor 1 isoform X17
microtubule-actin cross-linking factor 1 isoform X15
microtubule-actin cross-linking factor 1 isoform X23
microtubule-actin cross-linking factor 1 isoform X3
microtubule-actin cross-linking factor 1 isoform X24
microtubule-actin cross-linking factor 1 isoform X12
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized protein KIAA0754 homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
poly(A) binding protein cytoplasmic 4, transcript variant X2
poly(A) binding protein cytoplasmic 4, transcript variant X1
polyadenylate-binding protein 4 isoform X2
polyadenylate-binding protein 4 isoform X1
COORDINATES: nucleotide motif:Rfam:12.0:RF00431
hes related family bHLH transcription factor with YRPW motif like
hairy/enhancer-of-split related with YRPW motif-like protein
CYFIP-related Rac1 interactor A-like, transcript variant X2
CYFIP-related Rac1 interactor A-like, transcript variant X1
CYFIP-related Rac1 interactor A-like isoform X2
CYFIP-related Rac1 interactor A-like isoform X1
MYCL proto-oncogene, bHLH transcription factor
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
major facilitator superfamily domain containing 2A
sodium-dependent lysophosphatidylcholine symporter 1
cyclase associated actin cytoskeleton regulatory protein 1
palmitoyl-protein thioesterase 1, transcript variant X2
palmitoyl-protein thioesterase 1, transcript variant X3
palmitoyl-protein thioesterase 1, transcript variant X1
palmitoyl-protein thioesterase 1 isoform X2
palmitoyl-protein thioesterase 1 isoform X1
lysophospholipase 2, transcript variant X1
lysophospholipase 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
3-hydroxy-3-methylglutaryl-CoA lyase, transcript variant X1
3-hydroxy-3-methylglutaryl-CoA lyase, transcript variant X2
hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1
hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
serine and arginine rich splicing factor 10, transcript variant X4
serine and arginine rich splicing factor 10, transcript variant X5
serine and arginine rich splicing factor 10, transcript variant X3
serine/arginine-rich splicing factor 10 isoform X5
serine/arginine-rich splicing factor 10 isoform X4
serine/arginine-rich splicing factor 10 isoform X3
serine and arginine rich splicing factor 10, transcript variant X1
serine and arginine rich splicing factor 10, transcript variant X2
serine/arginine-rich splicing factor 10 isoform X2
serine/arginine-rich splicing factor 10 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 42% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
NIPA like domain containing 3, transcript variant X1
NIPA like domain containing 3, transcript variant X2
non-compact myelin associated protein, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
non-compact myelin associated protein, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
serine and arginine repetitive matrix 1, transcript variant X1
serine and arginine repetitive matrix 1, transcript variant X2
serine and arginine repetitive matrix 1, transcript variant X4
serine and arginine repetitive matrix 1, transcript variant X3
serine/arginine repetitive matrix protein 1 isoform X1
serine/arginine repetitive matrix protein 1 isoform X2
serine/arginine repetitive matrix protein 1 isoform X4
serine/arginine repetitive matrix protein 1 isoform X3
serine and arginine repetitive matrix 1, transcript variant X5
serine and arginine repetitive matrix 1, transcript variant X6
serine/arginine repetitive matrix protein 1 isoform X5
chloride intracellular channel protein 4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transmembrane protein 50A, transcript variant X1
transmembrane protein 50A, transcript variant X2
Rh blood group CcEe antigens, transcript variant X2
Rh blood group CcEe antigens, transcript variant X1
blood group Rh(CE) polypeptide isoform X1
blood group Rh(CE) polypeptide isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
low density lipoprotein receptor adaptor protein 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
low density lipoprotein receptor adapter protein 1
mannosyl-oligosaccharide 1,2-alpha-mannosidase IC
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
mitochondrial fission regulator 1 like, transcript variant X3
mitochondrial fission regulator 1-like isoform X2
mitochondrial fission regulator 1 like, transcript variant X2
mitochondrial fission regulator 1 like, transcript variant X1
mitochondrial fission regulator 1-like isoform X1
aurora kinase A and ninein-interacting protein-like
progestin and adipoQ receptor family member 7, transcript variant X2
progestin and adipoQ receptor family member 7, transcript variant X3
progestin and adipoQ receptor family member 7, transcript variant X1
progestin and adipoQ receptor family member 7, transcript variant X6
progestin and adipoQ receptor family member 7, transcript variant X5
progestin and adipoQ receptor family member 7, transcript variant X4
membrane progestin receptor alpha isoform X1
membrane progestin receptor alpha isoform X3
membrane progestin receptor alpha isoform X2
membrane progestin receptor alpha isoform X4
platelet activating factor acetylhydrolase 2, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
platelet activating factor acetylhydrolase 2, transcript variant X2
platelet activating factor acetylhydrolase 2, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
platelet activating factor acetylhydrolase 2, transcript variant X1
platelet-activating factor acetylhydrolase 2, cytoplasmic
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 15 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
family with sequence similarity 110 member D
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 38% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized protein C1orf232 homolog
connector enhancer of kinase suppressor of Ras 1
centrosomal protein 85, transcript variant X2
centrosomal protein 85, transcript variant X1
SH3 domain binding glutamate rich protein like 3
SH3 domain-binding glutamic acid-rich-like protein 3
UBX domain protein 11, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
UBX domain protein 11, transcript variant X1
crystallin beta-gamma domain containing 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
beta/gamma crystallin domain-containing protein 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 66% coverage of the annotated genomic feature by RNAseq alignments
dehydrodolichyl diphosphate synthase subunit
dehydrodolichyl diphosphate synthase complex subunit DHDDS
high mobility group nucleosomal binding domain 2
ribosomal protein S6 kinase A1, transcript variant X1
ribosomal protein S6 kinase alpha-1 isoform X1
ribosomal protein S6 kinase A1, transcript variant X2
ribosomal protein S6 kinase alpha-1 isoform X2
uncharacterized LOC117007606, transcript variant X2
uncharacterized LOC117007606, transcript variant X1
AT-rich interaction domain 1A, transcript variant X1
AT-rich interaction domain 1A, transcript variant X2
AT-rich interactive domain-containing protein 1A isoform X1
AT-rich interactive domain-containing protein 1A isoform X2
phosphatidylinositol glycan anchor biosynthesis class V, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
phosphatidylinositol glycan anchor biosynthesis class V, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
phosphatidylinositol glycan anchor biosynthesis class V, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
zinc finger DHHC-type palmitoyltransferase 18, transcript variant X1
zinc finger DHHC-type palmitoyltransferase 18, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 49 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
GPN-loop GTPase 2, transcript variant X2
GPN-loop GTPase 2, transcript variant X3
GPN-loop GTPase 2, transcript variant X1
G-patch domain containing 3, transcript variant X2
G-patch domain containing 3, transcript variant X1
G patch domain-containing protein 3 isoform X2
G patch domain-containing protein 3 isoform X1
nuclear receptor subfamily 0 group B member 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
nuclear distribution C, dynein complex regulator
keratinocyte differentiation factor 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
keratinocyte differentiation factor 1, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
keratinocyte differentiation factor 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
keratinocyte differentiation factor 1 isoform X1
keratinocyte differentiation factor 1 isoform X2
WD and tetratricopeptide repeats protein 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
CD164 molecule like 2, transcript variant X2
CD164 sialomucin-like 2 protein isoform X2
CD164 molecule like 2, transcript variant X3
CD164 molecule like 2, transcript variant X1
CD164 sialomucin-like 2 protein isoform X3
CD164 sialomucin-like 2 protein isoform X1
CD164 molecule like 2, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
CD164 sialomucin-like 2 protein isoform X4
WASP family member 2, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
WASP family member 2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
WASP family member 2, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
WASP family member 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
wiskott-Aldrich syndrome protein family member 2
AT-hook DNA binding motif containing 1, transcript variant X2
AT-hook DNA binding motif containing 1, transcript variant X3
AT-hook DNA binding motif containing 1, transcript variant X1
AT-hook DNA-binding motif-containing protein 1 isoform X1
AT-hook DNA-binding motif-containing protein 1 isoform X2
FGR proto-oncogene, Src family tyrosine kinase, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
FGR proto-oncogene, Src family tyrosine kinase, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
FGR proto-oncogene, Src family tyrosine kinase, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
FGR proto-oncogene, Src family tyrosine kinase, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
FGR proto-oncogene, Src family tyrosine kinase, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
FGR proto-oncogene, Src family tyrosine kinase, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
digestive cysteine proteinase 1-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
digestive cysteine proteinase 1-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
digestive cysteine proteinase 1-like isoform X1
counting factor associated protein D-like isoform X2
family with sequence similarity 76 member A
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 7 bases in 5 codons
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 7 bases in 5 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: phosphatase and actin regulator 4
regulator of chromosome condensation 1, transcript variant X1
COORDINATES: nucleotide motif:Rfam:12.0:RF00045
regulator of chromosome condensation isoform X1
regulator of chromosome condensation 1, transcript variant X3
regulator of chromosome condensation 1, transcript variant X4
regulator of chromosome condensation 1, transcript variant X2
regulator of chromosome condensation isoform X2
transcription elongation factor A3, transcript variant X2
transcription elongation factor A3, transcript variant X1
transcription elongation factor A protein 3 isoform X1
transcription elongation factor A protein 3 isoform X2
ArfGAP with SH3 domain, ankyrin repeat and PH domain 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
ArfGAP with SH3 domain, ankyrin repeat and PH domain 3, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3 isoform X2
arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3 isoform X1
ArfGAP with SH3 domain, ankyrin repeat and PH domain 3, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3 isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: transcription factor E2F2
uncharacterized LOC117007675, transcript variant X5
uncharacterized LOC117007675, transcript variant X3
uncharacterized LOC117007675, transcript variant X2
uncharacterized LOC117007675, transcript variant X1
uncharacterized LOC117007675, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
uncharacterized LOC117007383, transcript variant X2
uncharacterized LOC117007383, transcript variant X3
uncharacterized LOC117007383, transcript variant X1
uncharacterized LOC117007383, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
uncharacterized LOC117007386, transcript variant X5
uncharacterized LOC117007386, transcript variant X3
uncharacterized LOC117007386, transcript variant X4
uncharacterized LOC117007386, transcript variant X1
uncharacterized LOC117007386, transcript variant X6
uncharacterized LOC117007386, transcript variant X7
uncharacterized LOC117007386, transcript variant X2