Catharus ustulatus isolate bCatUst1 chromosome 23, bCatUst1.pri.v2, whole genome shotgun sequence.
type: Entry
definition: Catharus ustulatus isolate bCatUst1 chromosome 23, bCatUst1.pri.v2, whole genome shotgun sequence.
sequence version: NC_046243.1
sequence date: 2021-07-28
sequence: sequence
division: CON
label: NC_046243.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA613294
dblink: SAMN12618602
keyword: WGS
keyword: RefSeq
source: Catharus ustulatus (Swainson's thrush)
organism: Catharus ustulatus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Turdidae; Catharus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020358.1.\nAssembly name: bCatUst1.pri.v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/12/22. The original whole-genome shotgun project has the\naccession WNMQ00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 06-AUG-2020\nAssembly Method :: FALCON v. DX 1.9.0; FALCON-Unzip v.\n 6.0.0.47841; purge_dups github v.\n purge_haplotig (bitbucket v1.0.3+\n 1.Nov.2018); Scaff10x v. 2; Bionano Solve\n v. 3.2.1_04122018; Salsa2 HiC v. 2.2;\n Arrow polishing and gap filling v.\n Smrtlink_6.0.0.47841; Longranger Align v.\n 2.2.2; freebayes v. 1.3.1; gEVAL manual\n curation v. 2020-08-06; VGP assembly\n pipeline v. 1.5\nAssembly Name :: bCatUst1.pri.v2\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 60.58x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Catharus ustulatus Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 8847850
topology: linear
so has quality: SO_0000987
location: 1..8847850
location: region:1-8847850:1
RO_0002162: 91951

NC_046243
type: RefSeq
SIO_000068: refseq

PRJNA613294
type: BioProject
SIO_000068: bioproject

SAMN12618602
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8847850:1
position: 8847850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-8847850:1:source
so part of: sequence
organism: Catharus ustulatus
mol type: genomic DNA
isolate: bCatUst1
chromosome: 23
sex: female
tissue type: blood
dev stage: adult
country: Canada: Kamloops
lat lon: 50.67613 N 120.33787 W
collection date: 15-Jul-2018
collected by: Kira Delmore

91951
type: Taxonomy
SIO_000068: taxonomy

DLX4
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: DLX4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<5..2890)
location: region:5-2890:-1
so has part: feature:5-2890:-1:exon
subclass of: SO_0000010

117006441
type: Gene
SIO_000068: ncbigene

position:5:-1
position: 5
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:2890:-1
position: 2890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5-2890:-1:exon

DLX4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: DLX4
product: distal-less homeobox 4
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_033078901.1
SIO_010081: DLX4
subclass of: SO_0000673
so part of: DLX4
location: complement(join(<5..138,1381..1574,2641..2890))
location: region:5-2890:-1
so has part: feature:2641-2890:-1:exon
so has part: feature:1381-1574:-1:exon
so has part: feature:5-138:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2641-2890:-1:exon

position:2641:-1
position: 2641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1381-1574:-1:exon

position:1381:-1
position: 1381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1574:-1
position: 1574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5-138:-1:exon

position:138:-1
position: 138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DLX4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: DLX4
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: homeobox protein DLX-4
translation: MTMSSMAETLLGSDPSKAAFLELGPPQHYPPLHGLSQHDPPPFPSFGRPGPFPYPGGAPPPPHGGPFLPYAPPGAPGARLQDTEPEKPLAVPNGELRLAGKAKKLRKPRTIYSSLQLQALNQRFQQTQYLALPERAELAAQLGLTQTQVKIWFQNKRSKYKKILKQGPGAXEGEQHPQSTPALSPCSPGLPPL
SIO_010081: DLX4
subclass of: SO_0000673
so part of: DLX4
location: complement(join(<5..138,1381..1574,2641..2890))
location: region:5-2890:-1
so has part: feature:2641-2890:-1:exon
so has part: feature:1381-1574:-1:exon
so has part: feature:5-138:-1:exon

XP_032934792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2641-2890:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1381-1574:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5-138:-1:exon

KAT7
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: KAT7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(45360..64970)
location: region:45360-64970:-1
so has part: feature:45360-64970:-1:exon
subclass of: SO_0000010

117006689
type: Gene
SIO_000068: ncbigene

position:45360:-1
position: 45360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64970:-1
position: 64970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45360-64970:-1:exon

KAT7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: KAT7
product: lysine acetyltransferase 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_033079246.2
SIO_010081: KAT7
subclass of: SO_0000673
so part of: KAT7
location: complement(join(45360..45541,48964..49070,50412..50558,51203..51296,52706..52846,53623..53712,54845..55036,57491..57601,57733..57831,58613..58702,58843..58925,60255..60494,61045..61221,63412..63559,64788..64970))
location: region:45360-64970:-1
so has part: feature:64788-64970:-1:exon
so has part: feature:63412-63559:-1:exon
so has part: feature:61045-61221:-1:exon
so has part: feature:60255-60494:-1:exon
so has part: feature:58843-58925:-1:exon
so has part: feature:58613-58702:-1:exon
so has part: feature:57733-57831:-1:exon
so has part: feature:57491-57601:-1:exon
so has part: feature:54845-55036:-1:exon
so has part: feature:53623-53712:-1:exon
so has part: feature:52706-52846:-1:exon
so has part: feature:51203-51296:-1:exon
so has part: feature:50412-50558:-1:exon
so has part: feature:48964-49070:-1:exon
so has part: feature:45360-45541:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64788-64970:-1:exon

position:64788:-1
position: 64788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:63412-63559:-1:exon

position:63412:-1
position: 63412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63559:-1
position: 63559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:61045-61221:-1:exon

position:61045:-1
position: 61045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61221:-1
position: 61221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:60255-60494:-1:exon

position:60255:-1
position: 60255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60494:-1
position: 60494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:58843-58925:-1:exon

position:58843:-1
position: 58843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58925:-1
position: 58925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:58613-58702:-1:exon

position:58613:-1
position: 58613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58702:-1
position: 58702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:57733-57831:-1:exon

position:57733:-1
position: 57733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57831:-1
position: 57831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:57491-57601:-1:exon

position:57491:-1
position: 57491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57601:-1
position: 57601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:54845-55036:-1:exon

position:54845:-1
position: 54845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55036:-1
position: 55036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:53623-53712:-1:exon

position:53623:-1
position: 53623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53712:-1
position: 53712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:52706-52846:-1:exon

position:52706:-1
position: 52706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52846:-1
position: 52846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:51203-51296:-1:exon

position:51203:-1
position: 51203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51296:-1
position: 51296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:50412-50558:-1:exon

position:50412:-1
position: 50412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50558:-1
position: 50558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:48964-49070:-1:exon

position:48964:-1
position: 48964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49070:-1
position: 49070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:45360-45541:-1:exon

position:45541:-1
position: 45541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KAT7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: KAT7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone acetyltransferase KAT7
translation: MQRRKRNAGSSSDGTEDSDFSTDPEHTDSSESDGASRRSARVTRASARLSQSSQDSSPVRTAPSLGPDEPVYSTRRVTRSQQQPAPVTPKKYPLRQTRSSGSETEQAVDFSDRDTKNAADQDESPPRTPTGNAPSSESDIDISSPNVSHDESLAKDLSLKDSGSDLSHRPKRRRFHESYNFNMKCPTPGCNSLGHLTGKHERHFSISGCPLYHNLSADECKVRAQSRDKQIEERMLAHRQDDNNRHATRHQAPTERQLRYKEKVAELRKKRNSGLSKEQKEKYMEHRQTYGNTREPLLENLTSEYDLELFRRAQARASEDLEKLRLQGQITEGSNMIKTIAFGRYELDTWYHSPYPEEYARLGRLYMCEFCLKYMKSQTILRRHMAKCVWKHPPGDEIYRKGSISVFEVDGKKNKIYCQNLCLLAKLFLDHKTLYYDVEPFLFYVMTEADNTGCHLIGYFSKEKNSFLNYNVSCILTMPQYMRQGYGKMLIDFSYLLSKVEEKVGSPERPLSDLGLISYRSYWKEVLLRYLHNFQGKEISIKEISQETAVNPVDIVSTLQALQMLKYWKGKHLVLKRQDLIDEWIAKEAKRSNSNKTMDPSCLKWTPPKGT
SIO_010081: KAT7
subclass of: SO_0000673
so part of: KAT7
location: complement(join(45440..45541,48964..49070,50412..50558,51203..51296,52706..52846,53623..53712,54845..55036,57491..57601,57733..57831,58613..58702,58843..58925,60255..60494,61045..61221,63412..63559,64788..64802))
location: region:45440-64802:-1
so has part: feature:64788-64802:-1:exon
so has part: feature:63412-63559:-1:exon
so has part: feature:61045-61221:-1:exon
so has part: feature:60255-60494:-1:exon
so has part: feature:58843-58925:-1:exon
so has part: feature:58613-58702:-1:exon
so has part: feature:57733-57831:-1:exon
so has part: feature:57491-57601:-1:exon
so has part: feature:54845-55036:-1:exon
so has part: feature:53623-53712:-1:exon
so has part: feature:52706-52846:-1:exon
so has part: feature:51203-51296:-1:exon
so has part: feature:50412-50558:-1:exon
so has part: feature:48964-49070:-1:exon
so has part: feature:45440-45541:-1:exon

XP_032935137.1
type: Protein
SIO_000068: ncbiprotein

position:45440:-1
position: 45440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64802:-1
position: 64802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64788-64802:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:63412-63559:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:61045-61221:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:60255-60494:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:58843-58925:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:58613-58702:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:57733-57831:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:57491-57601:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:54845-55036:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:53623-53712:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:52706-52846:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:51203-51296:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:50412-50558:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:48964-49070:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:45440-45541:-1:exon

SLC35B1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: SLC35B1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 65973..76005
location: region:65973-76005:1
so has part: feature:65973-76005:1:exon
subclass of: SO_0000010

117006699
type: Gene
SIO_000068: ncbigene

position:65973:1
position: 65973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76005:1
position: 76005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65973-76005:1:exon

SLC35B1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SLC35B1
product: solute carrier family 35 member B1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033079263.1
SIO_010081: SLC35B1
subclass of: SO_0000673
so part of: SLC35B1
location: join(65973..66134,66420..66523,67146..67276,68574..68604,69367..69524,70374..70500,71919..72025,73075..73228,75665..76005)
location: region:65973-76005:1
so has part: feature:65973-66134:1:exon
so has part: feature:66420-66523:1:exon
so has part: feature:67146-67276:1:exon
so has part: feature:68574-68604:1:exon
so has part: feature:69367-69524:1:exon
so has part: feature:70374-70500:1:exon
so has part: feature:71919-72025:1:exon
so has part: feature:73075-73228:1:exon
so has part: feature:75665-76005:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65973-66134:1:exon

position:66134:1
position: 66134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:66420-66523:1:exon

position:66420:1
position: 66420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66523:1
position: 66523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:67146-67276:1:exon

position:67146:1
position: 67146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67276:1
position: 67276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:68574-68604:1:exon

position:68574:1
position: 68574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68604:1
position: 68604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:69367-69524:1:exon

position:69367:1
position: 69367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69524:1
position: 69524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:70374-70500:1:exon

position:70374:1
position: 70374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70500:1
position: 70500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:71919-72025:1:exon

position:71919:1
position: 71919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72025:1
position: 72025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:73075-73228:1:exon

position:73075:1
position: 73075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73228:1
position: 73228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:75665-76005:1:exon

position:75665:1
position: 75665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC35B1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SLC35B1
product: solute carrier family 35 member B1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033079264.1
SIO_010081: SLC35B1
subclass of: SO_0000673
so part of: SLC35B1
location: join(65994..66134,66420..66523,67029..67081,67199..67276,68574..68604,69367..69524,70374..70500,71919..72025,73075..73228,75665..76005)
location: region:65994-76005:1
so has part: feature:65994-66134:1:exon
so has part: feature:66420-66523:1:exon
so has part: feature:67029-67081:1:exon
so has part: feature:67199-67276:1:exon
so has part: feature:68574-68604:1:exon
so has part: feature:69367-69524:1:exon
so has part: feature:70374-70500:1:exon
so has part: feature:71919-72025:1:exon
so has part: feature:73075-73228:1:exon
so has part: feature:75665-76005:1:exon

position:65994:1
position: 65994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65994-66134:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66420-66523:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:67029-67081:1:exon

position:67029:1
position: 67029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67081:1
position: 67081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:67199-67276:1:exon

position:67199:1
position: 67199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:68574-68604:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:69367-69524:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:70374-70500:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:71919-72025:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:73075-73228:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:75665-76005:1:exon

SLC35B1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SLC35B1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 35 member B1 isoform X2
translation: MGASAAAGLPERLRLPVCFLGVFACYFYYGILQESITRGRYGEGAKQEKFKYALSLVFIQCVINAAFAKLLLQFLDPTRPDRTRGWLYGACSLSYLGAMVSSNAALQFVSYPTQVLGKSCKPIPVMLLGVTLLKKKYPPAKYLCVLLIVAGVALFLYKPKKGTGDTEHVFGYGELLLLLSLTLDGLTGVSQDHMRAHYQTSSNHMMLNVNLWSTLFLGAGILFTGELWEFLSFTQRYPSIISNILLFGLTSALGQSFIFMTVVYFGPLTCSILTTTRKFFTILASVVLFANPISPLQWVGTVLVFLGLGLDAKFGKGVKKTTH
SIO_010081: SLC35B1
subclass of: SO_0000673
so part of: SLC35B1
location: join(66028..66134,66420..66523,67029..67081,67199..67276,68574..68604,69367..69524,70374..70500,71919..72025,73075..73228,75665..75717)
location: region:66028-75717:1
so has part: feature:66028-66134:1:exon
so has part: feature:66420-66523:1:exon
so has part: feature:67029-67081:1:exon
so has part: feature:67199-67276:1:exon
so has part: feature:68574-68604:1:exon
so has part: feature:69367-69524:1:exon
so has part: feature:70374-70500:1:exon
so has part: feature:71919-72025:1:exon
so has part: feature:73075-73228:1:exon
so has part: feature:75665-75717:1:exon

XP_032935155.1
type: Protein
SIO_000068: ncbiprotein

position:66028:1
position: 66028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75717:1
position: 75717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66028-66134:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66420-66523:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:67029-67081:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:67199-67276:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:68574-68604:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:69367-69524:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:70374-70500:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:71919-72025:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:73075-73228:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:75665-75717:1:exon

SLC35B1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SLC35B1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 35 member B1 isoform X1
translation: MGASAAAGLPERLRLPVCFLGVFACYFYYGILQESITRGRYGEGAKQEKFKYALSLVFIQCVINAAFAKLLLQFLDAARPDRTRGWLYGACSLSYLGAMVSSNAALQFVSYPTQVLGKSCKPIPVMLLGVTLLKKKYPPAKYLCVLLIVAGVALFLYKPKKGTGDTEHVFGYGELLLLLSLTLDGLTGVSQDHMRAHYQTSSNHMMLNVNLWSTLFLGAGILFTGELWEFLSFTQRYPSIISNILLFGLTSALGQSFIFMTVVYFGPLTCSILTTTRKFFTILASVVLFANPISPLQWVGTVLVFLGLGLDAKFGKGVKKTTH
SIO_010081: SLC35B1
subclass of: SO_0000673
so part of: SLC35B1
location: join(66028..66134,66420..66523,67146..67276,68574..68604,69367..69524,70374..70500,71919..72025,73075..73228,75665..75717)
location: region:66028-75717:1
so has part: feature:66028-66134:1:exon
so has part: feature:66420-66523:1:exon
so has part: feature:67146-67276:1:exon
so has part: feature:68574-68604:1:exon
so has part: feature:69367-69524:1:exon
so has part: feature:70374-70500:1:exon
so has part: feature:71919-72025:1:exon
so has part: feature:73075-73228:1:exon
so has part: feature:75665-75717:1:exon

XP_032935154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66028-66134:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66420-66523:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:67146-67276:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:68574-68604:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:69367-69524:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:70374-70500:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:71919-72025:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:73075-73228:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:75665-75717:1:exon

LOC117006686
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117006686
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 91191..109141
location: region:91191-109141:1
so has part: feature:91191-109141:1:exon
subclass of: SO_0000010

117006686
type: Gene
SIO_000068: ncbigene

position:91191:1
position: 91191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109141:1
position: 109141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91191-109141:1:exon

LOC117006686
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117006686
product: speckle type BTB/POZ protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033079242.2
SIO_010081: LOC117006686
subclass of: SO_0000673
so part of: LOC117006686
location: join(91191..91297,92173..92294,95016..95167,95875..96002,100576..100753,101386..101441,101970..102092,106090..106232,108786..109141)
location: region:91191-109141:1
so has part: feature:91191-91297:1:exon
so has part: feature:92173-92294:1:exon
so has part: feature:95016-95167:1:exon
so has part: feature:95875-96002:1:exon
so has part: feature:100576-100753:1:exon
so has part: feature:101386-101441:1:exon
so has part: feature:101970-102092:1:exon
so has part: feature:106090-106232:1:exon
so has part: feature:108786-109141:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:91191-91297:1:exon

position:91297:1
position: 91297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:92173-92294:1:exon

position:92173:1
position: 92173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92294:1
position: 92294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:95016-95167:1:exon

position:95016:1
position: 95016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95167:1
position: 95167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:95875-96002:1:exon

position:95875:1
position: 95875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96002:1
position: 96002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:100576-100753:1:exon

position:100576:1
position: 100576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100753:1
position: 100753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:101386-101441:1:exon

position:101386:1
position: 101386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101441:1
position: 101441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:101970-102092:1:exon

position:101970:1
position: 101970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102092:1
position: 102092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:106090-106232:1:exon

position:106090:1
position: 106090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106232:1
position: 106232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:108786-109141:1:exon

position:108786:1
position: 108786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117006686
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117006686
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: speckle-type POZ protein
translation: MSRVPSPPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFKGHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHASDVLETSGWKSMVVSHPHLVAEAYRSLASAQCPFLGPPRKRLKQS
SIO_010081: LOC117006686
subclass of: SO_0000673
so part of: LOC117006686
location: join(91220..91297,92173..92294,95016..95167,95875..96002,100576..100753,101386..101441,101970..102092,106090..106232,108786..108930)
location: region:91220-108930:1
so has part: feature:91220-91297:1:exon
so has part: feature:92173-92294:1:exon
so has part: feature:95016-95167:1:exon
so has part: feature:95875-96002:1:exon
so has part: feature:100576-100753:1:exon
so has part: feature:101386-101441:1:exon
so has part: feature:101970-102092:1:exon
so has part: feature:106090-106232:1:exon
so has part: feature:108786-108930:1:exon

XP_032935133.1
type: Protein
SIO_000068: ncbiprotein

position:91220:1
position: 91220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108930:1
position: 108930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91220-91297:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92173-92294:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:95016-95167:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95875-96002:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:100576-100753:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:101386-101441:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:101970-102092:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:106090-106232:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:108786-108930:1:exon

LOC117006247
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117006247
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(108950..110615)
location: region:108950-110615:-1
so has part: feature:108950-110615:-1:exon
subclass of: SO_0000010

117006247
type: Gene
SIO_000068: ncbigene

position:108950:-1
position: 108950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110615:-1
position: 110615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108950-110615:-1:exon

LOC117006247
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117006247
product: myosin light chain kinase 2, skeletal/cardiac muscle-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_042779912.1
SIO_010081: LOC117006247
subclass of: SO_0000673
so part of: LOC117006247
location: complement(join(108950..109405,109480..109699,110599..110615))
location: region:108950-110615:-1
so has part: feature:110599-110615:-1:exon
so has part: feature:109480-109699:-1:exon
so has part: feature:108950-109405:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110599-110615:-1:exon

position:110599:-1
position: 110599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:109480-109699:-1:exon

position:109480:-1
position: 109480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109699:-1
position: 109699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:108950-109405:-1:exon

position:109405:-1
position: 109405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117006247
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117006247
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin light chain kinase 2, skeletal/cardiac muscle-like
translation: MERSLLPSPRAGPSSGVQGNNTDTGTAQPRAHPPPFPQSFSALWDRVRSPGPSTGRAVRAESGPEHRPGPSTGRAVRAQAGLSEQSPGPSTGRAVRAQAELSEHRPGCPSTGRAVRAESGPEHRPGCPSRGRAVRAEAELSEQRPGCPSTGRAQAEAGLSEQSPGPSTGRAVRAQAGLSEQSPGPSTGRAVRAESWPEHRPGCPSTGRAVRAESWPEHRPGCPRCSQAQR
SIO_010081: LOC117006247
subclass of: SO_0000673
so part of: LOC117006247
location: complement(join(108950..109405,109480..109699,110599..110615))
location: region:108950-110615:-1
so has part: feature:110599-110615:-1:exon
so has part: feature:109480-109699:-1:exon
so has part: feature:108950-109405:-1:exon

XP_042635846.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110599-110615:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:109480-109699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108950-109405:-1:exon

LOC117006562
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117006562
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 115324..116338
location: region:115324-116338:1
so has part: feature:115324-116338:1:exon
subclass of: SO_0000011

117006562
type: Gene
SIO_000068: ncbigene

position:115324:1
position: 115324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116338:1
position: 116338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115324-116338:1:exon

LOC117006562
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117006562
product: uncharacterized LOC117006562
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004420007.1
SIO_010081: LOC117006562
subclass of: SO_0000673
so part of: LOC117006562
location: join(115324..115629,115930..115962,116081..116338)
location: region:115324-116338:1
so has part: feature:115324-115629:1:exon
so has part: feature:115930-115962:1:exon
so has part: feature:116081-116338:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:115324-115629:1:exon

position:115629:1
position: 115629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:115930-115962:1:exon

position:115930:1
position: 115930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115962:1
position: 115962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:116081-116338:1:exon

position:116081:1
position: 116081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NXPH3
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: NXPH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(118516..120749)
location: region:118516-120749:-1
so has part: feature:118516-120749:-1:exon
subclass of: SO_0000010

117006240
type: Gene
SIO_000068: ncbigene

position:118516:-1
position: 118516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120749:-1
position: 120749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118516-120749:-1:exon

NXPH3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NXPH3
product: neurexophilin 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033078612.2
SIO_010081: NXPH3
subclass of: SO_0000673
so part of: NXPH3
location: complement(join(118516..119277,120456..120749))
location: region:118516-120749:-1
so has part: feature:120456-120749:-1:exon
so has part: feature:118516-119277:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:120456-120749:-1:exon

position:120456:-1
position: 120456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:118516-119277:-1:exon

position:119277:-1
position: 119277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NXPH3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: NXPH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurexophilin-3
translation: MHLPRSCALLLLLLLLQGGIALLVCCAPAAPGEPGLGELREPRELREPRELRGLPELLPPKPLPKPERSLAGPGSGSGQLGAVLQNRDPAAAPGRLQKLFGWGDFYSNIKTVKLNLLITGKVVDHGNGTVSVFFQHNSTGHGNISVSLVPPTKAVQFDLEQQIFIEAKESKVLNCRVESEQVARARKTSLCTFDPAKTCSQEHTQSRAAWLCSQPFRAVCVYITFYSSDYRLAQKVCPDFHSHSHSRPYFPSG
SIO_010081: NXPH3
subclass of: SO_0000673
so part of: NXPH3
location: complement(join(118585..119277,120456..120524))
location: region:118585-120524:-1
so has part: feature:120456-120524:-1:exon
so has part: feature:118585-119277:-1:exon

XP_032934503.1
type: Protein
SIO_000068: ncbiprotein

position:118585:-1
position: 118585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120524:-1
position: 120524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120456-120524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:118585-119277:-1:exon

NGFR
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: NGFR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(138719..151626)
location: region:138719-151626:-1
so has part: feature:138719-151626:-1:exon
subclass of: SO_0000010

117006521
type: Gene
SIO_000068: ncbigene

position:138719:-1
position: 138719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151626:-1
position: 151626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138719-151626:-1:exon

NGFR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NGFR
product: nerve growth factor receptor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033079038.1
SIO_010081: NGFR
subclass of: SO_0000673
so part of: NGFR
location: complement(join(138719..139020,140327..140487,141047..141290,146439..146798,150626..150767,151565..151626))
location: region:138719-151626:-1
so has part: feature:151565-151626:-1:exon
so has part: feature:150626-150767:-1:exon
so has part: feature:146439-146798:-1:exon
so has part: feature:141047-141290:-1:exon
so has part: feature:140327-140487:-1:exon
so has part: feature:138719-139020:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:151565-151626:-1:exon

position:151565:-1
position: 151565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:150626-150767:-1:exon

position:150626:-1
position: 150626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150767:-1
position: 150767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:146439-146798:-1:exon

position:146439:-1
position: 146439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146798:-1
position: 146798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:141047-141290:-1:exon

position:141047:-1
position: 141047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141290:-1
position: 141290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:140327-140487:-1:exon

position:140327:-1
position: 140327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140487:-1
position: 140487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:138719-139020:-1:exon

position:139020:-1
position: 139020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NGFR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: NGFR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 16
translation: MLPRASPPAQTPQNRPWGPAGGSKDDCATALFTASGECCRACNVGEGVVQPCGVNQTVCEPCLDSVTFSDAVSATEPCRPCTQCGGLQSMLAPCVESDDAVCVCAYGYFQDEASGSCRACGVCEVGFGLMFSCKGSQDTVCEECPEGTFSSEANFVDPCLPCTTCEDNEVLLRECTATADAECRALHPRWTTPAPFLEGSESPEVATREPLSTEGVASTAGDVATTVMGSSQPVVTHGGSDNLIPVYCSILAAVVVGLVAYIAFKRWNSCKQNKQGANNRPVNQTPSPEGEKLHSDSGISVDSQSLHDQQPPGTGTQGTAPKADGTPYTALPPAKRDEVEKLLASSAGDTWRQLAGELGYKEELLEAFTREESPARALLAHWGCRESATLDALLAALRRAQRGDIADSLASESTATSPV
SIO_010081: NGFR
subclass of: SO_0000673
so part of: NGFR
location: complement(join(138719..139020,140327..140487,141047..141290,146439..146798,150626..150767,151565..151615))
location: region:138719-151615:-1
so has part: feature:151565-151615:-1:exon
so has part: feature:150626-150767:-1:exon
so has part: feature:146439-146798:-1:exon
so has part: feature:141047-141290:-1:exon
so has part: feature:140327-140487:-1:exon
so has part: feature:138719-139020:-1:exon

XP_032934929.1
type: Protein
SIO_000068: ncbiprotein

position:151615:-1
position: 151615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151565-151615:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:150626-150767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:146439-146798:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:141047-141290:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:140327-140487:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:138719-139020:-1:exon

PHB
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: PHB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 169848..176674
location: region:169848-176674:1
so has part: feature:169848-176674:1:exon
subclass of: SO_0000010

117006667
type: Gene
SIO_000068: ncbigene

position:169848:1
position: 169848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176674:1
position: 176674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169848-176674:1:exon

PHB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PHB
product: prohibitin, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033079219.1
SIO_010081: PHB
subclass of: SO_0000673
so part of: PHB
location: join(169848..169938,170806..170910,171565..171726,172732..172874,173575..173691,174564..174659,175430..176013,176112..176674)
location: region:169848-176674:1
so has part: feature:169848-169938:1:exon
so has part: feature:170806-170910:1:exon
so has part: feature:171565-171726:1:exon
so has part: feature:172732-172874:1:exon
so has part: feature:173575-173691:1:exon
so has part: feature:174564-174659:1:exon
so has part: feature:175430-176013:1:exon
so has part: feature:176112-176674:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:169848-169938:1:exon

position:169938:1
position: 169938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:170806-170910:1:exon

position:170806:1
position: 170806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170910:1
position: 170910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:171565-171726:1:exon

position:171565:1
position: 171565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171726:1
position: 171726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:172732-172874:1:exon

position:172732:1
position: 172732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172874:1
position: 172874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:173575-173691:1:exon

position:173575:1
position: 173575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173691:1
position: 173691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:174564-174659:1:exon

position:174564:1
position: 174564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174659:1
position: 174659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:175430-176013:1:exon

position:175430:1
position: 175430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176013:1
position: 176013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:176112-176674:1:exon

position:176112:1
position: 176112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PHB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PHB
product: prohibitin, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033079220.1
SIO_010081: PHB
subclass of: SO_0000673
so part of: PHB
location: join(169848..169938,170806..170910,171565..171726,172732..172874,173575..173691,174564..174659,175430..175827,175868..176013,176112..176674)
location: region:169848-176674:1
so has part: feature:169848-169938:1:exon
so has part: feature:170806-170910:1:exon
so has part: feature:171565-171726:1:exon
so has part: feature:172732-172874:1:exon
so has part: feature:173575-173691:1:exon
so has part: feature:174564-174659:1:exon
so has part: feature:175430-175827:1:exon
so has part: feature:175868-176013:1:exon
so has part: feature:176112-176674:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:169848-169938:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:170806-170910:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:171565-171726:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:172732-172874:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:173575-173691:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174564-174659:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:175430-175827:1:exon

position:175827:1
position: 175827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:175868-176013:1:exon

position:175868:1
position: 175868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:176112-176674:1:exon

PHB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PHB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prohibitin isoform X1
translation: MGSARLGAARRRGGRVAADSCGGGWSSEMAAKVFESIGKLGLGLAVAGGVVNSALYNVDAGHRAVIFDRFRGVQDVVVGEGTHFLIPWVQKPIIFDCRSRPRNVPVITGSKDLQNVNITLRILFRPVTAQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSEDLTERAATFGLILDDVSLTHLTFGKEFTEAVEMKQVAQQEAERARFIVEKAEQQKKAAVISAEGDSKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSRSRNITYLPSGQSVLLQLPQ
SIO_010081: PHB
subclass of: SO_0000673
so part of: PHB
location: join(169872..169938,170806..170910,171565..171726,172732..172874,173575..173691,174564..174659,175430..175642)
location: region:169872-175642:1
so has part: feature:169872-169938:1:exon
so has part: feature:170806-170910:1:exon
so has part: feature:171565-171726:1:exon
so has part: feature:172732-172874:1:exon
so has part: feature:173575-173691:1:exon
so has part: feature:174564-174659:1:exon
so has part: feature:175430-175642:1:exon

XP_032935110.1
type: Protein
SIO_000068: ncbiprotein

position:169872:1
position: 169872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175642:1
position: 175642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169872-169938:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:170806-170910:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:171565-171726:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:172732-172874:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:173575-173691:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174564-174659:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:175430-175642:1:exon

PHB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PHB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prohibitin isoform X1
translation: MGSARLGAARRRGGRVAADSCGGGWSSEMAAKVFESIGKLGLGLAVAGGVVNSALYNVDAGHRAVIFDRFRGVQDVVVGEGTHFLIPWVQKPIIFDCRSRPRNVPVITGSKDLQNVNITLRILFRPVTAQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSEDLTERAATFGLILDDVSLTHLTFGKEFTEAVEMKQVAQQEAERARFIVEKAEQQKKAAVISAEGDSKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSRSRNITYLPSGQSVLLQLPQ
SIO_010081: PHB
subclass of: SO_0000673
so part of: PHB
location: join(169872..169938,170806..170910,171565..171726,172732..172874,173575..173691,174564..174659,175430..175642)
location: region:169872-175642:1
so has part: feature:169872-169938:1:exon
so has part: feature:170806-170910:1:exon
so has part: feature:171565-171726:1:exon
so has part: feature:172732-172874:1:exon
so has part: feature:173575-173691:1:exon
so has part: feature:174564-174659:1:exon
so has part: feature:175430-175642:1:exon

XP_032935111.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:169872-169938:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:170806-170910:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:171565-171726:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:172732-172874:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:173575-173691:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174564-174659:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:175430-175642:1:exon

PHB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PHB
product: prohibitin, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033079221.2
SIO_010081: PHB
subclass of: SO_0000673
so part of: PHB
location: join(169947..169965,170806..170910,171565..171726,172732..172874,173575..173691,174564..174659,175430..176013,176112..176674)
location: region:169947-176674:1
so has part: feature:169947-169965:1:exon
so has part: feature:170806-170910:1:exon
so has part: feature:171565-171726:1:exon
so has part: feature:172732-172874:1:exon
so has part: feature:173575-173691:1:exon
so has part: feature:174564-174659:1:exon
so has part: feature:175430-176013:1:exon
so has part: feature:176112-176674:1:exon

position:169947:1
position: 169947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169947-169965:1:exon

position:169965:1
position: 169965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:170806-170910:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:171565-171726:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:172732-172874:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:173575-173691:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:174564-174659:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:175430-176013:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:176112-176674:1:exon

PHB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PHB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prohibitin isoform X2
translation: MAAKVFESIGKLGLGLAVAGGVVNSALYNVDAGHRAVIFDRFRGVQDVVVGEGTHFLIPWVQKPIIFDCRSRPRNVPVITGSKDLQNVNITLRILFRPVTAQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSEDLTERAATFGLILDDVSLTHLTFGKEFTEAVEMKQVAQQEAERARFIVEKAEQQKKAAVISAEGDSKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSRSRNITYLPSGQSVLLQLPQ
SIO_010081: PHB
subclass of: SO_0000673
so part of: PHB
location: join(170823..170910,171565..171726,172732..172874,173575..173691,174564..174659,175430..175642)
location: region:170823-175642:1
so has part: feature:170823-170910:1:exon
so has part: feature:171565-171726:1:exon
so has part: feature:172732-172874:1:exon
so has part: feature:173575-173691:1:exon
so has part: feature:174564-174659:1:exon
so has part: feature:175430-175642:1:exon

XP_032935112.1
type: Protein
SIO_000068: ncbiprotein

position:170823:1
position: 170823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170823-170910:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:171565-171726:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:172732-172874:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:173575-173691:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:174564-174659:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:175430-175642:1:exon

ZNF652
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: ZNF652
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 179097..200686
location: region:179097-200686:1
so has part: feature:179097-200686:1:exon
subclass of: SO_0000010

117006583
type: Gene
SIO_000068: ncbigene

position:179097:1
position: 179097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200686:1
position: 200686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179097-200686:1:exon

ZNF652
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ZNF652
product: zinc finger protein 652
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 8 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_033079112.2
SIO_010081: ZNF652
subclass of: SO_0000673
so part of: ZNF652
location: join(179097..179164,189666..190726,194529..194676,196479..196594,198621..198765,199812..200686)
location: region:179097-200686:1
so has part: feature:179097-179164:1:exon
so has part: feature:189666-190726:1:exon
so has part: feature:194529-194676:1:exon
so has part: feature:196479-196594:1:exon
so has part: feature:198621-198765:1:exon
so has part: feature:199812-200686:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:179097-179164:1:exon

position:179164:1
position: 179164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:189666-190726:1:exon

position:189666:1
position: 189666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190726:1
position: 190726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:194529-194676:1:exon

position:194529:1
position: 194529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194676:1
position: 194676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:196479-196594:1:exon

position:196479:1
position: 196479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196594:1
position: 196594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:198621-198765:1:exon

position:198621:1
position: 198621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198765:1
position: 198765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:199812-200686:1:exon

position:199812:1
position: 199812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF652
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ZNF652
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 652
translation: MSQAAKGEPPPPGAGMAQEGPPAFYPSQELDLSTKVYKRESGSPFSVLVDSKVSKGHLHEREEQPFFRESRAVGEVRAVKEDRENSDDSEEEEEEEDEVTYKREQIIVEVNLNNQTLNVSKGEKGVPSQSKETAVLKSSSEEEEGDSGEEATEDSNDYEENERQKKKEKRVEKGSVGQRRSRRAASAAAAAASPAPRATRGRRKSAEPPKRKKKTAKEPKAPVQKSKCEEKETLTCEKCPRVFNTRWYLEKHMNVTHRRMQICDKCGKKFVLESELSLHQQTDCEKNIQCVSCNKSFKKLWSLHEHIKIVHGYAEKKFSCEICEKKFYTMAHVRKHMVAHTKDMPFTCETCGKSFKRSMSLKVHSLQHSGEKPFRCENCDERFQYKYQLRSHMSIHIGHKQFMCQWCGKDFNMKQYFDEHMKTHTGEKPFICEICGKSFTSRPNMKRHRRTHTGEKPYPCDVCGQRFRFSNMLKAHKEKCFRVTSPGTSPPGPAGPTALLPNPCPAPPAAGAALGLGPAVPPRPVPHPYGPLGLQPHGHHPSPHGHHPPQHLPVPPVPHLPPPPALFKSEPLNHRGHGHGHGAAGDGFLRHLDKASPAQPH
SIO_010081: ZNF652
subclass of: SO_0000673
so part of: ZNF652
location: join(189860..190726,194529..194676,196479..196594,198621..198765,199812..200341)
location: region:189860-200341:1
so has part: feature:189860-190726:1:exon
so has part: feature:194529-194676:1:exon
so has part: feature:196479-196594:1:exon
so has part: feature:198621-198765:1:exon
so has part: feature:199812-200341:1:exon

XP_032935003.1
type: Protein
SIO_000068: ncbiprotein

position:189860:1
position: 189860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200341:1
position: 200341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189860-190726:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:194529-194676:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196479-196594:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:198621-198765:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:199812-200341:1:exon

LOC117006584
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117006584
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(200513..202767)
location: region:200513-202767:-1
so has part: feature:200513-202767:-1:exon
subclass of: SO_0000010

117006584
type: Gene
SIO_000068: ncbigene

position:200513:-1
position: 200513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202767:-1
position: 202767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200513-202767:-1:exon

LOC117006584
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117006584
product: keratinocyte proline-rich protein-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033079114.2
SIO_010081: LOC117006584
subclass of: SO_0000673
so part of: LOC117006584
location: complement(join(200513..201489,202107..202767))
location: region:200513-202767:-1
so has part: feature:202107-202767:-1:exon
so has part: feature:200513-201489:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:202107-202767:-1:exon

position:202107:-1
position: 202107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:200513-201489:-1:exon

position:201489:-1
position: 201489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117006584
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117006584
product: keratinocyte proline-rich protein-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033079113.2
SIO_010081: LOC117006584
subclass of: SO_0000673
so part of: LOC117006584
location: complement(join(200513..201487,201588..201977))
location: region:200513-201977:-1
so has part: feature:201588-201977:-1:exon
so has part: feature:200513-201487:-1:exon

position:201977:-1
position: 201977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201588-201977:-1:exon

position:201588:-1
position: 201588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:200513-201487:-1:exon

position:201487:-1
position: 201487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117006584
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117006584
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: keratinocyte proline-rich protein-like isoform X1
translation: MMDPGPSRLIPDPKPRSDPGGIPKMDSRSQTQISKLDSGSPNPESKAGSCFTNSHPKSRSWIPNPKAGSQIPARVSVAVPGPGAARSRRCHHGCGCARSGSGAQSHPRPKIPALDPRSHPSRCQCDCSRLALPRCRTKPSLPHPCPCPQWFSGSIPSPVPNLDPRLQIWIPDPKSASQTPNLDPRPQIWIPDLDPRPQIWIPDPKAGSQIQSQPVSVWLCLAQEPQETNIATPVPVPMAVPTVVQQLNPIPGPKLDPRSGSQIPNLHVRPQIWIPDPIPNHVCVAVPHPGAAGSRGCHTRARGRACGGSAAQFHPRPQTGSQIWIPDPKAGSQTPNLDPRPQICISDP
SIO_010081: LOC117006584
subclass of: SO_0000673
so part of: LOC117006584
location: complement(join(200513..201487,201588..201659))
location: region:200513-201659:-1
so has part: feature:201588-201659:-1:exon
so has part: feature:200513-201487:-1:exon

XP_032935004.1
type: Protein
SIO_000068: ncbiprotein

position:201659:-1
position: 201659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201588-201659:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200513-201487:-1:exon

LOC117006584
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117006584
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: keratinocyte proline-rich protein-like isoform X2
translation: MDSRSQTQISKLDSGSPNPESKAGSCFTNSHPKSRSWIPNPKAGSQIPARVSVAVPGPGAARSRRCHHGCGCARSGSGAQSHPRPKIPALDPRSHPSRCQCDCSRLALPRCRTKPSLPHPCPCPQWFSGSIPSPVPNLDPRLQIWIPDPKSASQTPNLDPRPQIWIPDLDPRPQIWIPDPKAGSQIQSQPVSVWLCLAQEPQETNIATPVPVPMAVPTVVQQLNPIPGPKLDPRSGSQIPNLHVRPQIWIPDPIPNHVCVAVPHPGAAGSRGCHTRARGRACGGSAAQFHPRPQTGSQIWIPDPKAGSQTPNLDPRPQICISDP
SIO_010081: LOC117006584
subclass of: SO_0000673
so part of: LOC117006584
location: complement(200513..201487)
location: region:200513-201487:-1
so has part: feature:200513-201487:-1:exon

XP_032935005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:200513-201487:-1:exon

PHOSPHO1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: PHOSPHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 208985..215633
location: region:208985-215633:1
so has part: feature:208985-215633:1:exon
subclass of: SO_0000010

117006445
type: Gene
SIO_000068: ncbigene

position:208985:1
position: 208985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215633:1
position: 215633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208985-215633:1:exon

PHOSPHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PHOSPHO1
product: phosphoethanolamine/phosphocholine phosphatase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_033078906.1
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(208985..209070,212411..212480,214866..215633)
location: region:208985-215633:1
so has part: feature:208985-209070:1:exon
so has part: feature:212411-212480:1:exon
so has part: feature:214866-215633:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:208985-209070:1:exon

position:209070:1
position: 209070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:212411-212480:1:exon

position:212411:1
position: 212411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212480:1
position: 212480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:214866-215633:1:exon

position:214866:1
position: 214866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PHOSPHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PHOSPHO1
product: phosphoethanolamine/phosphocholine phosphatase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033078905.1
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(211311..211987,212411..212480,214866..215633)
location: region:211311-215633:1
so has part: feature:211311-211987:1:exon
so has part: feature:212411-212480:1:exon
so has part: feature:214866-215633:1:exon

position:211311:1
position: 211311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211311-211987:1:exon

position:211987:1
position: 211987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:212411-212480:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214866-215633:1:exon

PHOSPHO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PHOSPHO1
product: phosphoethanolamine/phosphocholine phosphatase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033078907.2
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(211311..211961,212411..212480,214866..215633)
location: region:211311-215633:1
so has part: feature:211311-211961:1:exon
so has part: feature:212411-212480:1:exon
so has part: feature:214866-215633:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:211311-211961:1:exon

position:211961:1
position: 211961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:212411-212480:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214866-215633:1:exon

PHOSPHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PHOSPHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoethanolamine/phosphocholine phosphatase isoform X1
translation: MVEENRGPEPGDGASMRRCCQGVGLPCLFKGSGMTSAQPPRFLLVFDFDETIVDENSDDSVLRGRDLPEPLRHSPEGGSYNEHMRRVLAFLGEQGVSPADFRAVYENIPLSPGMAELFQFLSKHHELLELILISDANTFGIEAKLSAAGLRSLFRKIFSNPASIDRRGFLTLGPYHSHKCPRCPANMCKRKILSEYLRERAQDVEFQRVLYVGDGANDFCPSGILRAADVAFPRKGYPMHRLIQESQEKQPGAFQAAVVPWESATEVARYLQELLRKKC
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(211968..211987,212411..212480,214866..215615)
location: region:211968-215615:1
so has part: feature:211968-211987:1:exon
so has part: feature:212411-212480:1:exon
so has part: feature:214866-215615:1:exon

XP_032934796.1
type: Protein
SIO_000068: ncbiprotein

position:211968:1
position: 211968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215615:1
position: 215615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211968-211987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212411-212480:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214866-215615:1:exon

PHOSPHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PHOSPHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoethanolamine/phosphocholine phosphatase isoform X2
translation: MRRCCQGVGLPCLFKGSGMTSAQPPRFLLVFDFDETIVDENSDDSVLRGRDLPEPLRHSPEGGSYNEHMRRVLAFLGEQGVSPADFRAVYENIPLSPGMAELFQFLSKHHELLELILISDANTFGIEAKLSAAGLRSLFRKIFSNPASIDRRGFLTLGPYHSHKCPRCPANMCKRKILSEYLRERAQDVEFQRVLYVGDGANDFCPSGILRAADVAFPRKGYPMHRLIQESQEKQPGAFQAAVVPWESATEVARYLQELLRKKC
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(212436..212480,214866..215615)
location: region:212436-215615:1
so has part: feature:212436-212480:1:exon
so has part: feature:214866-215615:1:exon

XP_032934797.1
type: Protein
SIO_000068: ncbiprotein

position:212436:1
position: 212436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212436-212480:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214866-215615:1:exon

PHOSPHO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PHOSPHO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphoethanolamine/phosphocholine phosphatase isoform X2
translation: MRRCCQGVGLPCLFKGSGMTSAQPPRFLLVFDFDETIVDENSDDSVLRGRDLPEPLRHSPEGGSYNEHMRRVLAFLGEQGVSPADFRAVYENIPLSPGMAELFQFLSKHHELLELILISDANTFGIEAKLSAAGLRSLFRKIFSNPASIDRRGFLTLGPYHSHKCPRCPANMCKRKILSEYLRERAQDVEFQRVLYVGDGANDFCPSGILRAADVAFPRKGYPMHRLIQESQEKQPGAFQAAVVPWESATEVARYLQELLRKKC
SIO_010081: PHOSPHO1
subclass of: SO_0000673
so part of: PHOSPHO1
location: join(212436..212480,214866..215615)
location: region:212436-215615:1
so has part: feature:212436-212480:1:exon
so has part: feature:214866-215615:1:exon

XP_032934798.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:212436-212480:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214866-215615:1:exon

ABI3
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: ABI3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(217728..224246)
location: region:217728-224246:-1
so has part: feature:217728-224246:-1:exon
subclass of: SO_0000010

117006518
type: Gene
SIO_000068: ncbigene

position:217728:-1
position: 217728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224246:-1
position: 224246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217728-224246:-1:exon

ABI3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ABI3
product: ABI family member 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033079034.1
SIO_010081: ABI3
subclass of: SO_0000673
so part of: ABI3
location: complement(join(217728..217956,218064..218312,218435..218592,218927..219019,220055..220140,221516..221692,222891..223058,224096..224246))
location: region:217728-224246:-1
so has part: feature:224096-224246:-1:exon
so has part: feature:222891-223058:-1:exon
so has part: feature:221516-221692:-1:exon
so has part: feature:220055-220140:-1:exon
so has part: feature:218927-219019:-1:exon
so has part: feature:218435-218592:-1:exon
so has part: feature:218064-218312:-1:exon
so has part: feature:217728-217956:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:224096-224246:-1:exon

position:224096:-1
position: 224096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:222891-223058:-1:exon

position:222891:-1
position: 222891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223058:-1
position: 223058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:221516-221692:-1:exon

position:221516:-1
position: 221516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221692:-1
position: 221692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:220055-220140:-1:exon

position:220055:-1
position: 220055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220140:-1
position: 220140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:218927-219019:-1:exon

position:218927:-1
position: 218927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219019:-1
position: 219019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:218435-218592:-1:exon

position:218435:-1
position: 218435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218592:-1
position: 218592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:218064-218312:-1:exon

position:218064:-1
position: 218064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218312:-1
position: 218312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:217728-217956:-1:exon

position:217956:-1
position: 217956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ABI3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ABI3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ABI gene family member 3
translation: MSELERLRLGDIPEGRQLLREQHDNLHRVADYCQGNYLQASDKRKALEETMALSTQSLASVTYQVSSVASAFLRLLELQAAQLRQLEADIACVAQRVDIHKEKVARREIGALTVPKGVPMGPKVAAPPEPPELEPYYRKPLNFSALDGVGHGVKDTSTQLSRTGTLARKSTKSSSAQPAGTLGRSSRVPEPVQPPVVPPGKLPSAPSSSLGSLSSSSAPAAPGEGIPVPPPPPGPPPAVPPPPGPPPPAAAIPPPPALPAHLAAPPAPDDLELLPPPPAVPEFGDLTPPPPPAVPEFGDLTPPPPPAVPEFGDLTPPPPPDVPEFGDLTPPPPPAAEDPPWAPQNYLEKVVALYPYTGQKDNELSLEPGALLFVTRRFSDGWCEGVAEQSSGLFPGNYVESV
SIO_010081: ABI3
subclass of: SO_0000673
so part of: ABI3
location: complement(join(217796..217956,218064..218312,218435..218592,218927..219019,220055..220140,221516..221692,222891..223058,224096..224212))
location: region:217796-224212:-1
so has part: feature:224096-224212:-1:exon
so has part: feature:222891-223058:-1:exon
so has part: feature:221516-221692:-1:exon
so has part: feature:220055-220140:-1:exon
so has part: feature:218927-219019:-1:exon
so has part: feature:218435-218592:-1:exon
so has part: feature:218064-218312:-1:exon
so has part: feature:217796-217956:-1:exon

XP_032934925.1
type: Protein
SIO_000068: ncbiprotein

position:217796:-1
position: 217796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224212:-1
position: 224212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224096-224212:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:222891-223058:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:221516-221692:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:220055-220140:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:218927-219019:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:218435-218592:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:218064-218312:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:217796-217956:-1:exon

GNGT2
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: GNGT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 222908..228829
location: region:222908-228829:1
so has part: feature:222908-228829:1:exon
subclass of: SO_0000010

117006519
type: Gene
SIO_000068: ncbigene

position:222908:1
position: 222908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228829:1
position: 228829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222908-228829:1:exon

GNGT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: GNGT2
product: G protein subunit gamma transducin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033079035.1
SIO_010081: GNGT2
subclass of: SO_0000673
so part of: GNGT2
location: join(222908..222986,227158..227253,228679..228829)
location: region:222908-228829:1
so has part: feature:222908-222986:1:exon
so has part: feature:227158-227253:1:exon
so has part: feature:228679-228829:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:222908-222986:1:exon

position:222986:1
position: 222986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:227158-227253:1:exon

position:227158:1
position: 227158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227253:1
position: 227253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:228679-228829:1:exon

position:228679:1
position: 228679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GNGT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: GNGT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-T2
translation: MAQDMTEKELLKMELDQLKKEVKNERQMVSKTGKEIKEYIESMAGEDPLLKGVPEDKNPFKEKGGCTIS
SIO_010081: GNGT2
subclass of: SO_0000673
so part of: GNGT2
location: join(227170..227253,228679..228804)
location: region:227170-228804:1
so has part: feature:227170-227253:1:exon
so has part: feature:228679-228804:1:exon

XP_032934926.1
type: Protein
SIO_000068: ncbiprotein

position:227170:1
position: 227170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228804:1
position: 228804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227170-227253:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:228679-228804:1:exon

TRNAQ-UUG
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: TRNAQ-UUG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(231099..231170)
location: region:231099-231170:-1
so has part: feature:231099-231170:-1:exon
subclass of: SO_0000663

117006721
type: Gene
SIO_000068: ncbigene

position:231099:-1
position: 231099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231170:-1
position: 231170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231099-231170:-1:exon

TRNAQ-UUG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 91951
gene: TRNAQ-UUG
product: tRNA-Gln
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA glutamine (anticodon UUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(231135..231137),aa:Gln,seq:ttg)
SIO_010081: TRNAQ-UUG
subclass of: SO_0000673
so part of: TRNAQ-UUG
location: complement(231099..231170)
location: region:231099-231170:-1
so has part: feature:231099-231170:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:231099-231170:-1:exon

IGF2BP1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: IGF2BP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(237427..255376)
location: region:237427-255376:-1
so has part: feature:237427-255376:-1:exon
subclass of: SO_0000010

117006531
type: Gene
SIO_000068: ncbigene

position:237427:-1
position: 237427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255376:-1
position: 255376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237427-255376:-1:exon

IGF2BP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: IGF2BP1
product: insulin like growth factor 2 mRNA binding protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 66% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033079051.1
SIO_010081: IGF2BP1
subclass of: SO_0000673
so part of: IGF2BP1
location: complement(join(237427..237519,238634..238747,239455..239586,240326..240400,240964..241080,242063..242185,242966..243101,244014..244136,246921..246984,247307..247358,248163..248211,253195..253255,255202..255376))
location: region:237427-255376:-1
so has part: feature:255202-255376:-1:exon
so has part: feature:253195-253255:-1:exon
so has part: feature:248163-248211:-1:exon
so has part: feature:247307-247358:-1:exon
so has part: feature:246921-246984:-1:exon
so has part: feature:244014-244136:-1:exon
so has part: feature:242966-243101:-1:exon
so has part: feature:242063-242185:-1:exon
so has part: feature:240964-241080:-1:exon
so has part: feature:240326-240400:-1:exon
so has part: feature:239455-239586:-1:exon
so has part: feature:238634-238747:-1:exon
so has part: feature:237427-237519:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:255202-255376:-1:exon

position:255202:-1
position: 255202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:253195-253255:-1:exon

position:253195:-1
position: 253195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253255:-1
position: 253255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:248163-248211:-1:exon

position:248163:-1
position: 248163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248211:-1
position: 248211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:247307-247358:-1:exon

position:247307:-1
position: 247307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247358:-1
position: 247358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:246921-246984:-1:exon

position:246921:-1
position: 246921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246984:-1
position: 246984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:244014-244136:-1:exon

position:244014:-1
position: 244014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244136:-1
position: 244136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:242966-243101:-1:exon

position:242966:-1
position: 242966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243101:-1
position: 243101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:242063-242185:-1:exon

position:242063:-1
position: 242063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242185:-1
position: 242185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:240964-241080:-1:exon

position:240964:-1
position: 240964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241080:-1
position: 241080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:240326-240400:-1:exon

position:240326:-1
position: 240326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240400:-1
position: 240400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:239455-239586:-1:exon

position:239455:-1
position: 239455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239586:-1
position: 239586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:238634-238747:-1:exon

position:238634:-1
position: 238634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238747:-1
position: 238747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:237427-237519:-1:exon

position:237519:-1
position: 237519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IGF2BP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: IGF2BP1
product: insulin like growth factor 2 mRNA binding protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 50% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033079050.1
SIO_010081: IGF2BP1
subclass of: SO_0000673
so part of: IGF2BP1
location: complement(join(237427..237519,238634..238747,239455..239586,240326..240400,240964..241080,242063..242185,242966..243101,244014..244136,245054..245188,245884..246168,246921..246984,247307..247358,248163..248211,253195..253255,255202..255376))
location: region:237427-255376:-1
so has part: feature:255202-255376:-1:exon
so has part: feature:253195-253255:-1:exon
so has part: feature:248163-248211:-1:exon
so has part: feature:247307-247358:-1:exon
so has part: feature:246921-246984:-1:exon
so has part: feature:245884-246168:-1:exon
so has part: feature:245054-245188:-1:exon
so has part: feature:244014-244136:-1:exon
so has part: feature:242966-243101:-1:exon
so has part: feature:242063-242185:-1:exon
so has part: feature:240964-241080:-1:exon
so has part: feature:240326-240400:-1:exon
so has part: feature:239455-239586:-1:exon
so has part: feature:238634-238747:-1:exon
so has part: feature:237427-237519:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:255202-255376:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:253195-253255:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:248163-248211:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:247307-247358:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:246921-246984:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:245884-246168:-1:exon

position:245884:-1
position: 245884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246168:-1
position: 246168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:245054-245188:-1:exon

position:245054:-1
position: 245054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245188:-1
position: 245188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:244014-244136:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:242966-243101:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:242063-242185:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:240964-241080:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:240326-240400:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:239455-239586:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:238634-238747:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:237427-237519:-1:exon

IGF2BP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: IGF2BP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: insulin-like growth factor 2 mRNA-binding protein 1 isoform X2
translation: MNKLYIGNLPEGVTAAELEKVFAEHRISFSGQFLVKSGYAFVDCPDEAWAMKAIETFSGKVELHGKQLEIEHSVPKKQRSRKIQIRNIPPQLRWEVLDGLLAQYGTVENCEQVNTDSDTAVVNVTYASREQTRQADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQELTLYNPERTITVRGSPECCCRAEQEIMRKVREAYENDVAAMSLQSHLIPGLNLAAVGLFPASSPAVPPPPSGVSGAAPYSSFLPPEQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPDTPDSKVRMVVITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPREQTPDENEQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKGPSGQSQSRRK
SIO_010081: IGF2BP1
subclass of: SO_0000673
so part of: IGF2BP1
location: complement(join(237427..237519,238634..238747,239455..239586,240326..240400,240964..241080,242063..242185,242966..243101,244014..244136,246921..246984,247307..247358,248163..248211,253195..253255,255202..255376))
location: region:237427-255376:-1
so has part: feature:255202-255376:-1:exon
so has part: feature:253195-253255:-1:exon
so has part: feature:248163-248211:-1:exon
so has part: feature:247307-247358:-1:exon
so has part: feature:246921-246984:-1:exon
so has part: feature:244014-244136:-1:exon
so has part: feature:242966-243101:-1:exon
so has part: feature:242063-242185:-1:exon
so has part: feature:240964-241080:-1:exon
so has part: feature:240326-240400:-1:exon
so has part: feature:239455-239586:-1:exon
so has part: feature:238634-238747:-1:exon
so has part: feature:237427-237519:-1:exon

XP_032934942.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:255202-255376:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:253195-253255:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:248163-248211:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:247307-247358:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:246921-246984:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:244014-244136:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:242966-243101:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:242063-242185:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:240964-241080:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:240326-240400:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:239455-239586:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:238634-238747:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:237427-237519:-1:exon

IGF2BP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: IGF2BP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: insulin-like growth factor 2 mRNA-binding protein 1 isoform X1
translation: MNKLYIGNLPEGVTAAELEKVFAEHRISFSGQFLVKSGYAFVDCPDEAWAMKAIETFSGKVELHGKQLEIEHSVPKKQRSRKIQIRNIPPQLRWEVLDGLLAQYGTVENCEQVNTDSDTAVVNVTYASREQTRQAILKLNGHQLESHALKVSYIPDEQPENGRRAGPGGPGGPGGRGPARPGSPLPPGTPKQPPLDVPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTAEGCSAACRMILDIMNKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQELTLYNPERTITVRGSPECCCRAEQEIMRKVREAYENDVAAMSLQSHLIPGLNLAAVGLFPASSPAVPPPPSGVSGAAPYSSFLPPEQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPDTPDSKVRMVVITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPREQTPDENEQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKGPSGQSQSRRK
SIO_010081: IGF2BP1
subclass of: SO_0000673
so part of: IGF2BP1
location: complement(join(237427..237519,238634..238747,239455..239586,240326..240400,240964..241080,242063..242185,242966..243101,244014..244136,245054..245188,245884..246168,246921..246984,247307..247358,248163..248211,253195..253255,255202..255376))
location: region:237427-255376:-1
so has part: feature:255202-255376:-1:exon
so has part: feature:253195-253255:-1:exon
so has part: feature:248163-248211:-1:exon
so has part: feature:247307-247358:-1:exon
so has part: feature:246921-246984:-1:exon
so has part: feature:245884-246168:-1:exon
so has part: feature:245054-245188:-1:exon
so has part: feature:244014-244136:-1:exon
so has part: feature:242966-243101:-1:exon
so has part: feature:242063-242185:-1:exon
so has part: feature:240964-241080:-1:exon
so has part: feature:240326-240400:-1:exon
so has part: feature:239455-239586:-1:exon
so has part: feature:238634-238747:-1:exon
so has part: feature:237427-237519:-1:exon

XP_032934941.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:255202-255376:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:253195-253255:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:248163-248211:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:247307-247358:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:246921-246984:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:245884-246168:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:245054-245188:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:244014-244136:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:242966-243101:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:242063-242185:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:240964-241080:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:240326-240400:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:239455-239586:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:238634-238747:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:237427-237519:-1:exon

LOC117006248
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117006248
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 266140..270129
location: region:266140-270129:1
so has part: feature:266140-270129:1:exon
subclass of: SO_0000010

117006248
type: Gene
SIO_000068: ncbigene

position:266140:1
position: 266140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270129:1
position: 270129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266140-270129:1:exon

LOC117006248
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117006248
product: gastric inhibitory polypeptide
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 63% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_042779913.1
SIO_010081: LOC117006248
subclass of: SO_0000673
so part of: LOC117006248
location: join(266140..266219,267174..267314,268733..268778,269913..270129)
location: region:266140-270129:1
so has part: feature:266140-266219:1:exon
so has part: feature:267174-267314:1:exon
so has part: feature:268733-268778:1:exon
so has part: feature:269913-270129:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:266140-266219:1:exon

position:266219:1
position: 266219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:267174-267314:1:exon

position:267174:1
position: 267174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267314:1
position: 267314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:268733-268778:1:exon

position:268733:1
position: 268733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268778:1
position: 268778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:269913-270129:1:exon

position:269913:1
position: 269913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117006248
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117006248
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastric inhibitory polypeptide
translation: MSLRSLRALPLLLAWLGVVSMEESGPGVPVAVPRPLHRRYSEATLASDYSRTMDHVLRKNFVEWLLARREKKSQDISEPFKREAQPQNSALEGSEGLREFLEQEFLTWLISGELCRAT
SIO_010081: LOC117006248
subclass of: SO_0000673
so part of: LOC117006248
location: join(266140..266219,267174..267314,268733..268778,269913..270002)
location: region:266140-270002:1
so has part: feature:266140-266219:1:exon
so has part: feature:267174-267314:1:exon
so has part: feature:268733-268778:1:exon
so has part: feature:269913-270002:1:exon

XP_042635847.1
type: Protein
SIO_000068: ncbiprotein

position:270002:1
position: 270002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266140-266219:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:267174-267314:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:268733-268778:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269913-270002:1:exon

ATP5MC1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: ATP5MC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 271997..275876
location: region:271997-275876:1
so has part: feature:271997-275876:1:exon
subclass of: SO_0000010

117006433
type: Gene
SIO_000068: ncbigene

position:271997:1
position: 271997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275876:1
position: 275876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271997-275876:1:exon

ATP5MC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ATP5MC1
product: ATP synthase membrane subunit c locus 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033078889.1
SIO_010081: ATP5MC1
subclass of: SO_0000673
so part of: ATP5MC1
location: join(271997..272101,272897..272945,273484..273561,274595..274773,275712..275876)
location: region:271997-275876:1
so has part: feature:271997-272101:1:exon
so has part: feature:272897-272945:1:exon
so has part: feature:273484-273561:1:exon
so has part: feature:274595-274773:1:exon
so has part: feature:275712-275876:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:271997-272101:1:exon

position:272101:1
position: 272101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:272897-272945:1:exon

position:272897:1
position: 272897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272945:1
position: 272945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:273484-273561:1:exon

position:273484:1
position: 273484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273561:1
position: 273561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:274595-274773:1:exon

position:274595:1
position: 274595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274773:1
position: 274773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:275712-275876:1:exon

position:275712:1
position: 275712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATP5MC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ATP5MC1
product: ATP synthase membrane subunit c locus 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033078890.1
SIO_010081: ATP5MC1
subclass of: SO_0000673
so part of: ATP5MC1
location: join(271997..272101,272897..272945,273484..273561,274595..274773,275313..275428)
location: region:271997-275428:1
so has part: feature:271997-272101:1:exon
so has part: feature:272897-272945:1:exon
so has part: feature:273484-273561:1:exon
so has part: feature:274595-274773:1:exon
so has part: feature:275313-275428:1:exon

position:275428:1
position: 275428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271997-272101:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:272897-272945:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:273484-273561:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274595-274773:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:275313-275428:1:exon

position:275313:1
position: 275313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATP5MC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ATP5MC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase F(0) complex subunit C1, mitochondrial isoform X1
translation: MQAPLALLGSPALFRCCSRALARPVSVAVFSRPEAQTAQVSLAVPSPVQPLRPFHSTALSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM
SIO_010081: ATP5MC1
subclass of: SO_0000673
so part of: ATP5MC1
location: join(272907..272945,273484..273561,274595..274773,275712..275826)
location: region:272907-275826:1
so has part: feature:272907-272945:1:exon
so has part: feature:273484-273561:1:exon
so has part: feature:274595-274773:1:exon
so has part: feature:275712-275826:1:exon

XP_032934780.1
type: Protein
SIO_000068: ncbiprotein

position:272907:1
position: 272907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275826:1
position: 275826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272907-272945:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:273484-273561:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274595-274773:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:275712-275826:1:exon

ATP5MC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ATP5MC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase F(0) complex subunit C1, mitochondrial isoform X2
translation: MQAPLALLGSPALFRCCSRALARPVSVAVFSRPEAQTAQVSLAVPSPVQPLRPFHSTALSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYSTLISFPVSFPICSLFPDFIPCSIP
SIO_010081: ATP5MC1
subclass of: SO_0000673
so part of: ATP5MC1
location: join(272907..272945,273484..273561,274595..274773,275313..275424)
location: region:272907-275424:1
so has part: feature:272907-272945:1:exon
so has part: feature:273484-273561:1:exon
so has part: feature:274595-274773:1:exon
so has part: feature:275313-275424:1:exon

XP_032934781.1
type: Protein
SIO_000068: ncbiprotein

position:275424:1
position: 275424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272907-272945:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:273484-273561:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274595-274773:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:275313-275424:1:exon

UBE2Z
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: UBE2Z
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 277121..282572
location: region:277121-282572:1
so has part: feature:277121-282572:1:exon
subclass of: SO_0000010

117006436
type: Gene
SIO_000068: ncbigene

position:277121:1
position: 277121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282572:1
position: 282572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277121-282572:1:exon

UBE2Z
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: UBE2Z
product: ubiquitin conjugating enzyme E2 Z
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033078894.1
SIO_010081: UBE2Z
subclass of: SO_0000673
so part of: UBE2Z
location: join(277121..277452,278255..278327,278724..278911,279552..279663,279961..280073,280649..280739,282078..282572)
location: region:277121-282572:1
so has part: feature:277121-277452:1:exon
so has part: feature:278255-278327:1:exon
so has part: feature:278724-278911:1:exon
so has part: feature:279552-279663:1:exon
so has part: feature:279961-280073:1:exon
so has part: feature:280649-280739:1:exon
so has part: feature:282078-282572:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:277121-277452:1:exon

position:277452:1
position: 277452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:278255-278327:1:exon

position:278255:1
position: 278255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278327:1
position: 278327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:278724-278911:1:exon

position:278724:1
position: 278724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278911:1
position: 278911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:279552-279663:1:exon

position:279552:1
position: 279552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279663:1
position: 279663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:279961-280073:1:exon

position:279961:1
position: 279961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280073:1
position: 280073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:280649-280739:1:exon

position:280649:1
position: 280649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280739:1
position: 280739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:282078-282572:1:exon

position:282078:1
position: 282078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBE2Z
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: UBE2Z
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 Z
translation: MAESPAAEDAAPAPAAVLAAGGGSASPSAAGAAGTPGVFIPAELWAAAGFGAAAAPGSGVAPGSGGGGGAPMAAAAAGAALLTHSAFWDPTVSGDWDSERPSPACLLRIKRDIMSIYKEPPPGMFVVPDPHDMTKIHALITGPFDTPYEGGFFLFLFRCPPDYPIHPPRVKLMTTGNNTVRFNPNFYRNGKVCLSILGTWTGPAWSPAQSISSVLISIQSLMTENPYHNEPGFEQERHPGDSKNYNECIRHETIRVAVCDMLEGKCPCPEPLRGVMEKSFMEYLDFYEGVCKERLYLQGQSMQDPFGEKRGLFDYQALLGRLQALRARLQERLQPDSADMDSDSSSSEPEPDTQACPKA
SIO_010081: UBE2Z
subclass of: SO_0000673
so part of: UBE2Z
location: join(277121..277452,278255..278327,278724..278911,279552..279663,279961..280073,280649..280739,282078..282248)
location: region:277121-282248:1
so has part: feature:277121-277452:1:exon
so has part: feature:278255-278327:1:exon
so has part: feature:278724-278911:1:exon
so has part: feature:279552-279663:1:exon
so has part: feature:279961-280073:1:exon
so has part: feature:280649-280739:1:exon
so has part: feature:282078-282248:1:exon

XP_032934785.1
type: Protein
SIO_000068: ncbiprotein

position:282248:1
position: 282248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277121-277452:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:278255-278327:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:278724-278911:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:279552-279663:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:279961-280073:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280649-280739:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:282078-282248:1:exon

LOC117006684
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117006684
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 286397..287695
location: region:286397-287695:1
so has part: feature:286397-287695:1:exon
subclass of: SO_0000011

117006684
type: Gene
SIO_000068: ncbigene

position:286397:1
position: 286397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287695:1
position: 287695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286397-287695:1:exon

LOC117006684
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117006684
product: uncharacterized LOC117006684
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004420012.1
SIO_010081: LOC117006684
subclass of: SO_0000673
so part of: LOC117006684
location: join(286397..287462,287539..287592,287627..287695)
location: region:286397-287695:1
so has part: feature:286397-287462:1:exon
so has part: feature:287539-287592:1:exon
so has part: feature:287627-287695:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:286397-287462:1:exon

position:287462:1
position: 287462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:287539-287592:1:exon

position:287539:1
position: 287539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287592:1
position: 287592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:287627-287695:1:exon

position:287627:1
position: 287627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SNF8
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: SNF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(287469..293201)
location: region:287469-293201:-1
so has part: feature:287469-293201:-1:exon
subclass of: SO_0000010

117006683
type: Gene
SIO_000068: ncbigene

position:287469:-1
position: 287469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293201:-1
position: 293201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287469-293201:-1:exon

SNF8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SNF8
product: SNF8 subunit of ESCRT-II
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033079240.1
SIO_010081: SNF8
subclass of: SO_0000673
so part of: SNF8
location: complement(join(287469..287782,288674..288748,289903..290044,290676..290748,291621..291725,292364..292502,292676..292726,293108..293201))
location: region:287469-293201:-1
so has part: feature:293108-293201:-1:exon
so has part: feature:292676-292726:-1:exon
so has part: feature:292364-292502:-1:exon
so has part: feature:291621-291725:-1:exon
so has part: feature:290676-290748:-1:exon
so has part: feature:289903-290044:-1:exon
so has part: feature:288674-288748:-1:exon
so has part: feature:287469-287782:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:293108-293201:-1:exon

position:293108:-1
position: 293108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:292676-292726:-1:exon

position:292676:-1
position: 292676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292726:-1
position: 292726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:292364-292502:-1:exon

position:292364:-1
position: 292364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292502:-1
position: 292502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:291621-291725:-1:exon

position:291621:-1
position: 291621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291725:-1
position: 291725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:290676-290748:-1:exon

position:290676:-1
position: 290676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290748:-1
position: 290748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:289903-290044:-1:exon

position:289903:-1
position: 289903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290044:-1
position: 290044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:288674-288748:-1:exon

position:288674:-1
position: 288674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288748:-1
position: 288748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:287469-287782:-1:exon

position:287782:-1
position: 287782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SNF8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SNF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar-sorting protein SNF8
translation: MHRRGVGAGAIARKKLTEAKYKERGTVLAEDQLAQMSKQLETFRTHLEAFASKHKQEIRKSPEFRLQFQDMCATIGVDPLASGKGFWAEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLEELQQQVLKGRGKFAQDVSQDDLLRAIKKLKVLGNGFGIIPVGGTFLVQSVPAELNMDHTVVLQLAEKKGFVTVGEIRTSLKWETERAKQVLDHLLREGMAWLDAQAPAEPQFWFPALFPELHGQDGAPEAAPGNAEP
SIO_010081: SNF8
subclass of: SO_0000673
so part of: SNF8
location: complement(join(287642..287782,288674..288748,289903..290044,290676..290748,291621..291725,292364..292502,292676..292726,293108..293161))
location: region:287642-293161:-1
so has part: feature:293108-293161:-1:exon
so has part: feature:292676-292726:-1:exon
so has part: feature:292364-292502:-1:exon
so has part: feature:291621-291725:-1:exon
so has part: feature:290676-290748:-1:exon
so has part: feature:289903-290044:-1:exon
so has part: feature:288674-288748:-1:exon
so has part: feature:287642-287782:-1:exon

XP_032935131.1
type: Protein
SIO_000068: ncbiprotein

position:287642:-1
position: 287642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293161:-1
position: 293161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293108-293161:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:292676-292726:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:292364-292502:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:291621-291725:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:290676-290748:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:289903-290044:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:288674-288748:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:287642-287782:-1:exon

HOXB13
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: HOXB13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 305918..312045
location: region:305918-312045:1
so has part: feature:305918-312045:1:exon
subclass of: SO_0000010

117006249
type: Gene
SIO_000068: ncbigene

position:305918:1
position: 305918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312045:1
position: 312045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305918-312045:1:exon

HOXB13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: HOXB13
product: homeobox B13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
transcript id: XM_033078625.1
SIO_010081: HOXB13
subclass of: SO_0000673
so part of: HOXB13
location: join(305918..306359,311795..312045)
location: region:305918-312045:1
so has part: feature:305918-306359:1:exon
so has part: feature:311795-312045:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:305918-306359:1:exon

position:306359:1
position: 306359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:311795-312045:1:exon

position:311795:1
position: 311795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: HOXB13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B13
translation: MNPGYPPELPPEPPKAPPGSAPLPYGYFGSGYYSCRVARGSLKAGPAPQGPFQAEKFLEAPGGSGEDFQNRPAEFAFYPGYGGAYQAVPGYLDVAVVPGLGEPRHEPLLPVDGGYHQPWALAGGWGGQMCCGKEQGQAGFLLKSAFADTAPQEGCSLRRGRKKRVPYSKGQLKELEKEFASSKFITRERRRKISAATNLSERQITIWFQNRRVKEKKVVAKIKNSASGTP
SIO_010081: HOXB13
subclass of: SO_0000673
so part of: HOXB13
location: join(305918..306359,311795..312045)
location: region:305918-312045:1
so has part: feature:305918-306359:1:exon
so has part: feature:311795-312045:1:exon

XP_032934516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:305918-306359:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:311795-312045:1:exon

HOXB9
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: HOXB9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 352764..358814
location: region:352764-358814:1
so has part: feature:352764-358814:1:exon
subclass of: SO_0000010

117006523
type: Gene
SIO_000068: ncbigene

position:352764:1
position: 352764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358814:1
position: 358814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352764-358814:1:exon

HOXB9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: HOXB9
product: homeobox B9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins
transcript id: XM_033079042.1
SIO_010081: HOXB9
subclass of: SO_0000673
so part of: HOXB9
location: join(352764..353184,358585..358814)
location: region:352764-358814:1
so has part: feature:352764-353184:1:exon
so has part: feature:358585-358814:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:352764-353184:1:exon

position:353184:1
position: 353184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:358585-358814:1:exon

position:358585:1
position: 358585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: HOXB9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B9
translation: MSISGTLSNYYVDSIINHESEDSPTKFPSGQFSAARQGSEHLEFPSCSFQPKPAVFGAPWASPVYPAYLPQQSAAESRFLRGWIEPAPRAESAPVKSEPLLIPKSNQDFHLETSAGAHRRGGFEDHKVCEGSEDKERTDQTNPSWLQARSSRKKRCPYSKFQTLELEKEFLFNAYLSRERRHEVARLLNLSERQVKIWFQNRRMKMKKMNKEQGKE
SIO_010081: HOXB9
subclass of: SO_0000673
so part of: HOXB9
location: join(352764..353184,358585..358814)
location: region:352764-358814:1
so has part: feature:352764-353184:1:exon
so has part: feature:358585-358814:1:exon

XP_032934933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:352764-353184:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:358585-358814:1:exon

HOXB8
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: HOXB8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 369297..370923
location: region:369297-370923:1
so has part: feature:369297-370923:1:exon
subclass of: SO_0000010

117006468
type: Gene
SIO_000068: ncbigene

position:369297:1
position: 369297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370923:1
position: 370923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369297-370923:1:exon

HOXB8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: HOXB8
product: homeobox B8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 18 Proteins
transcript id: XM_033078941.1
SIO_010081: HOXB8
subclass of: SO_0000673
so part of: HOXB8
location: join(369297..369734,370507..370877)
location: region:369297-370877:1
so has part: feature:369297-369734:1:exon
so has part: feature:370507-370877:1:exon

position:370877:1
position: 370877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369297-369734:1:exon

position:369734:1
position: 369734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:370507-370877:1:exon

position:370507:1
position: 370507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: HOXB8
product: homeobox B8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 25 Proteins
transcript id: XM_033078940.1
SIO_010081: HOXB8
subclass of: SO_0000673
so part of: HOXB8
location: join(369314..369734,370504..370923)
location: region:369314-370923:1
so has part: feature:369314-369734:1:exon
so has part: feature:370504-370923:1:exon

position:369314:1
position: 369314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369314-369734:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:370504-370923:1:exon

position:370504:1
position: 370504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: HOXB8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B8 isoform X1
translation: MSSYFVNSLFSKYKTGDSLRPNYYDCGFAQDLGGRPTVVYGPSAGGTFQHPPQIQEFYHGASSLSSSPYQQNPCAVACHGDPGNFYGYEPLQRQSLFGAQEPELVQFTDCKLAASGLGEEAESSEQSPSPTQLFPWMRPQAAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELEKQKMERAQEVDEEGEAQKADKK
SIO_010081: HOXB8
subclass of: SO_0000673
so part of: HOXB8
location: join(369314..369734,370504..370811)
location: region:369314-370811:1
so has part: feature:369314-369734:1:exon
so has part: feature:370504-370811:1:exon

XP_032934831.1
type: Protein
SIO_000068: ncbiprotein

position:370811:1
position: 370811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369314-369734:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:370504-370811:1:exon

HOXB8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: HOXB8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B8 isoform X2
translation: MSSYFVNSLFSKYKTGDSLRPNYYDCGFAQDLGGRPTVVYGPSAGGTFQHPPQIQEFYHGASSLSSSPYQQNPCAVACHGDPGNFYGYEPLQRQSLFGAQEPELVQFTDCKLAASGLGEEAESSEQSPSPTQLFPWMRPQAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELEKQKMERAQEVDEEGEAQKADKK
SIO_010081: HOXB8
subclass of: SO_0000673
so part of: HOXB8
location: join(369314..369734,370507..370811)
location: region:369314-370811:1
so has part: feature:369314-369734:1:exon
so has part: feature:370507-370811:1:exon

XP_032934832.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:369314-369734:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:370507-370811:1:exon

HOXB7
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: HOXB7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 373120..376942
location: region:373120-376942:1
so has part: feature:373120-376942:1:exon
subclass of: SO_0000010

117006462
type: Gene
SIO_000068: ncbigene

position:373120:1
position: 373120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376942:1
position: 376942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373120-376942:1:exon

HOXB7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: HOXB7
product: homeobox B7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 24 Proteins, and 20% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033078931.1
SIO_010081: HOXB7
subclass of: SO_0000673
so part of: HOXB7
location: join(373120..373571,376689..376942)
location: region:373120-376942:1
so has part: feature:373120-373571:1:exon
so has part: feature:376689-376942:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:373120-373571:1:exon

position:373571:1
position: 373571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:376689-376942:1:exon

position:376689:1
position: 376689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: HOXB7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B7
translation: MSSLYYANALFSKYQAASSVFPSGVFPEQTSCAFASNTQRAGYGAGSTPPFAASMPGLYSSGSSVHPQPPPGMYSSGYGLEPGSFNMHCSPFEQNLSMMCAGDASKQNCSKSDQRDSDLQGDSNFRIYPWMRSTGTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSACPGSSGQEKPDAEEDEEE
SIO_010081: HOXB7
subclass of: SO_0000673
so part of: HOXB7
location: join(373169..373571,376689..376942)
location: region:373169-376942:1
so has part: feature:373169-373571:1:exon
so has part: feature:376689-376942:1:exon

XP_032934822.1
type: Protein
SIO_000068: ncbiprotein

position:373169:1
position: 373169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373169-373571:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376689-376942:1:exon

HOXB6
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: HOXB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 389108..390921
location: region:389108-390921:1
so has part: feature:389108-390921:1:exon
subclass of: SO_0000010

117006461
type: Gene
SIO_000068: ncbigene

position:389108:1
position: 389108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390921:1
position: 390921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389108-390921:1:exon

HOXB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: HOXB6
product: homeobox B6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 28 Proteins
transcript id: XM_033078930.1
SIO_010081: HOXB6
subclass of: SO_0000673
so part of: HOXB6
location: join(389108..389525,390662..390921)
location: region:389108-390921:1
so has part: feature:389108-389525:1:exon
so has part: feature:390662-390921:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:389108-389525:1:exon

position:389525:1
position: 389525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:390662-390921:1:exon

position:390662:1
position: 390662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: HOXB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B6
translation: MSSYFVNSTFPVSLAAGQEPFLGQIPLYPSGYADPLRHYPGTYGASGAQDKPYSSSPYYQQSSAAFGGRASACDYGPGGFFRDKEPSVPPGSLDEPFGPEARKDCAQSKSAFGESEEQKCSAPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKWKKENKLLNSSQLSAEEEEEKAAE
SIO_010081: HOXB6
subclass of: SO_0000673
so part of: HOXB6
location: join(389120..389525,390662..390921)
location: region:389120-390921:1
so has part: feature:389120-389525:1:exon
so has part: feature:390662-390921:1:exon

XP_032934821.1
type: Protein
SIO_000068: ncbiprotein

position:389120:1
position: 389120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389120-389525:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390662-390921:1:exon

HOXB5
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: HOXB5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 393949..395757
location: region:393949-395757:1
so has part: feature:393949-395757:1:exon
subclass of: SO_0000010

117006460
type: Gene
SIO_000068: ncbigene

position:393949:1
position: 393949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395757:1
position: 395757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393949-395757:1:exon

HOXB5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: HOXB5
product: homeobox B5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 42% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033078929.1
SIO_010081: HOXB5
subclass of: SO_0000673
so part of: HOXB5
location: join(393949..394486,395473..395757)
location: region:393949-395757:1
so has part: feature:393949-394486:1:exon
so has part: feature:395473-395757:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:393949-394486:1:exon

position:394486:1
position: 394486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:395473-395757:1:exon

position:395473:1
position: 395473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: HOXB5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B5
translation: MSSYFVNSFSGRYPNGPDYQLLNYGTGSSMNGSYRDSSTMHSSSYGYNYNGMDLSLNRSASSSHFGAESSRGFPSPAQESRFRQASSCSLSSPDSLPCSNSESHGGKPAPSPSEPAPAASSTNFTELDETSASSGADEGTPLSSSIPRAQAEPIATSTAAPEGQAPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLASAGSAFQP
SIO_010081: HOXB5
subclass of: SO_0000673
so part of: HOXB5
location: join(393949..394486,395473..395720)
location: region:393949-395720:1
so has part: feature:393949-394486:1:exon
so has part: feature:395473-395720:1:exon

XP_032934820.1
type: Protein
SIO_000068: ncbiprotein

position:395720:1
position: 395720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393949-394486:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:395473-395720:1:exon

HOXB4
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: HOXB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 416862..438950
location: region:416862-438950:1
so has part: feature:416862-438950:1:exon
subclass of: SO_0000010

117006250
type: Gene
SIO_000068: ncbigene

position:416862:1
position: 416862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438950:1
position: 438950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416862-438950:1:exon

HOXB4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: HOXB4
product: homeobox B4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins
transcript id: XM_033078626.1
SIO_010081: HOXB4
subclass of: SO_0000673
so part of: HOXB4
location: join(416862..417234,418987..419302,438878..438950)
location: region:416862-438950:1
so has part: feature:416862-417234:1:exon
so has part: feature:418987-419302:1:exon
so has part: feature:438878-438950:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:416862-417234:1:exon

position:417234:1
position: 417234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:418987-419302:1:exon

position:418987:1
position: 418987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419302:1
position: 419302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:438878-438950:1:exon

position:438878:1
position: 438878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: HOXB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B4
translation: MAMSSFLINSNYVDPKFPPCEEYSHGDYLPDHSPPEFYGGQRHHRESTCQHEAMFEARSACKEQLYPSCPSSGQPVLSPRGHVHAPAGLRQPDTPSPPPACSQNPGSGAEPVVYPWMKKVHVSTVNPNFSGGEAKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHALSLSERQIKIWFQNRRMKWKKDHKLPNTKVRAGSSSSSSSSSSSSSSSGALQGPPGGAQKIRSEQGGFRFQRKKIARPSIKAL
SIO_010081: HOXB4
subclass of: SO_0000673
so part of: HOXB4
location: join(416862..417234,418987..419302,438878..438950)
location: region:416862-438950:1
so has part: feature:416862-417234:1:exon
so has part: feature:418987-419302:1:exon
so has part: feature:438878-438950:1:exon

XP_032934517.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416862-417234:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:418987-419302:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:438878-438950:1:exon

HOXB3
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: HOXB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 435290..449021
location: region:435290-449021:1
so has part: feature:435290-449021:1:exon
subclass of: SO_0000010

117006465
type: Gene
SIO_000068: ncbigene

position:435290:1
position: 435290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449021:1
position: 449021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435290-449021:1:exon

HOXB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: HOXB3
product: homeobox B3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033078933.1
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: join(435290..435368,440954..441001,446393..446862,448214..449021)
location: region:435290-449021:1
so has part: feature:435290-435368:1:exon
so has part: feature:440954-441001:1:exon
so has part: feature:446393-446862:1:exon
so has part: feature:448214-449021:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:435290-435368:1:exon

position:435368:1
position: 435368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:440954-441001:1:exon

position:440954:1
position: 440954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441001:1
position: 441001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:446393-446862:1:exon

position:446393:1
position: 446393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446862:1
position: 446862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:448214-449021:1:exon

position:448214:1
position: 448214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: HOXB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B3
translation: MQKASYYDGSALFGAFSYGAGANGFGYEGAQPPFQAAPHAESDFQRSACSLQSLGKNKELNGSCMRPGLPPEPPASPNANGGAAGSGGGKSVAGKANLGISKQIFPWMKESRQNSKQKGGSPGAETCGGSGGEKSPPGSSASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKSKGVGSSSGGPSPAGSPPQPMQATAGFLNALHPMSGAYEAPSPPSFNKPHQNAYAVPTAGYQAPLKGCPGQQKYGGAPNAAEYEPHVLQGNGVTYGTPGVQGSPAYVGGNFVDSLPTSGPALYGLNHLGTGMDYGGAAAGQAHGPCESHAAYAELSSHHATSQGRIQEAPKLTHL
SIO_010081: HOXB3
subclass of: SO_0000673
so part of: HOXB3
location: join(446490..446862,448214..448974)
location: region:446490-448974:1
so has part: feature:446490-446862:1:exon
so has part: feature:448214-448974:1:exon

XP_032934824.1
type: Protein
SIO_000068: ncbiprotein

position:446490:1
position: 446490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448974:1
position: 448974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446490-446862:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:448214-448974:1:exon

HOXB1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: HOXB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 464231..467184
location: region:464231-467184:1
so has part: feature:464231-467184:1:exon
subclass of: SO_0000010

117006560
type: Gene
SIO_000068: ncbigene

position:464231:1
position: 464231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467184:1
position: 467184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464231-467184:1:exon

HOXB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: HOXB1
product: homeobox B1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
transcript id: XM_033079086.1
SIO_010081: HOXB1
subclass of: SO_0000673
so part of: HOXB1
location: join(464231..464729,466877..467184)
location: region:464231-467184:1
so has part: feature:464231-464729:1:exon
so has part: feature:466877-467184:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:464231-464729:1:exon

position:464729:1
position: 464729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:466877-467184:1:exon

position:466877:1
position: 466877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOXB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: HOXB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Hox-B1
translation: MDNPGMNSFLEFAVCTRGSSARPRAEPGSPSFPPCSASPGSAAGDHFGLVATNLGQSFHPPSSTRFAPSGYPAQPYGHQQLCLGQQDSDGLCFQGYPSGSVADGYCGSAGPFQQPMLGQEQPGYLAGLFGELGPCGQEELEAPGPPEPGPALAFEWMRVRRNPPKTGKTPELGLLGQPSAIRTNFSTKQLTELEKEFHFNKYLTRARRVEIAATLELNEAQVKIWFQNRRMKQKKREKEGLAPARAAKAAAETSDQSSPETSPSPGSS
SIO_010081: HOXB1
subclass of: SO_0000673
so part of: HOXB1
location: join(464231..464729,466877..467184)
location: region:464231-467184:1
so has part: feature:464231-464729:1:exon
so has part: feature:466877-467184:1:exon

XP_032934977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:464231-464729:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:466877-467184:1:exon

SKAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: SKAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 483580..554691
location: region:483580-554691:1
so has part: feature:483580-554691:1:exon
subclass of: SO_0000010

117006589
type: Gene
SIO_000068: ncbigene

position:483580:1
position: 483580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554691:1
position: 554691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483580-554691:1:exon

SKAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SKAP1
product: src kinase associated phosphoprotein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033079120.1
SIO_010081: SKAP1
subclass of: SO_0000673
so part of: SKAP1
location: join(483580..483633,486635..486740,489543..489568,500361..500468,538125..538202,538835..538918,539166..539290,539655..539718,540292..540459,542236..542292,542646..542758,554593..554691)
location: region:483580-554691:1
so has part: feature:483580-483633:1:exon
so has part: feature:486635-486740:1:exon
so has part: feature:489543-489568:1:exon
so has part: feature:500361-500468:1:exon
so has part: feature:538125-538202:1:exon
so has part: feature:538835-538918:1:exon
so has part: feature:539166-539290:1:exon
so has part: feature:539655-539718:1:exon
so has part: feature:540292-540459:1:exon
so has part: feature:542236-542292:1:exon
so has part: feature:542646-542758:1:exon
so has part: feature:554593-554691:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:483580-483633:1:exon

position:483633:1
position: 483633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:486635-486740:1:exon

position:486635:1
position: 486635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486740:1
position: 486740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:489543-489568:1:exon

position:489543:1
position: 489543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489568:1
position: 489568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:500361-500468:1:exon

position:500361:1
position: 500361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500468:1
position: 500468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:538125-538202:1:exon

position:538125:1
position: 538125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538202:1
position: 538202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:538835-538918:1:exon

position:538835:1
position: 538835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538918:1
position: 538918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:539166-539290:1:exon

position:539166:1
position: 539166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539290:1
position: 539290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:539655-539718:1:exon

position:539655:1
position: 539655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539718:1
position: 539718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:540292-540459:1:exon

position:540292:1
position: 540292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540459:1
position: 540459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:542236-542292:1:exon

position:542236:1
position: 542236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542292:1
position: 542292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:542646-542758:1:exon

position:542646:1
position: 542646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542758:1
position: 542758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:554593-554691:1:exon

position:554593:1
position: 554593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SKAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SKAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: src kinase-associated phosphoprotein 1
translation: MDPEIRRLLEEAEDYLAQGLQEEPLSARAREQRDAILRAFQRLKARYHLEFPSRGEEEYEGQDGSDENPSWNFGPSHISEASFPPEFQHEGLEEFPRPIQYSGNILKQGYLEKRSREPSFFGSDWHKRWCVLTQRSFLYYANEKSKHPKGSFPIERYQAHLDSQLRKDSRKKCCFQLFCPGKRSYEFTAPSPAEAQDWVEQIQFLLKDLSSLTIPCDDEEEEEEEEEPSKDRDSSDSMNYSQNSTLNLEEQELEGDDIYEVLPDEEMEPPFPEDEEDFGSGEENFDEDYSSYYQGLWDCRGDNPDELSFQRGDLIRILSKEYPGYGWWVGELGQEIGIVPKEFLMPAFELEQ
SIO_010081: SKAP1
subclass of: SO_0000673
so part of: SKAP1
location: join(483603..483633,486635..486740,489543..489568,500361..500468,538125..538202,538835..538918,539166..539290,539655..539718,540292..540459,542236..542292,542646..542758,554593..554691)
location: region:483603-554691:1
so has part: feature:483603-483633:1:exon
so has part: feature:486635-486740:1:exon
so has part: feature:489543-489568:1:exon
so has part: feature:500361-500468:1:exon
so has part: feature:538125-538202:1:exon
so has part: feature:538835-538918:1:exon
so has part: feature:539166-539290:1:exon
so has part: feature:539655-539718:1:exon
so has part: feature:540292-540459:1:exon
so has part: feature:542236-542292:1:exon
so has part: feature:542646-542758:1:exon
so has part: feature:554593-554691:1:exon

XP_032935011.1
type: Protein
SIO_000068: ncbiprotein

position:483603:1
position: 483603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483603-483633:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:486635-486740:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:489543-489568:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:500361-500468:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:538125-538202:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:538835-538918:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:539166-539290:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:539655-539718:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:540292-540459:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:542236-542292:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:542646-542758:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:554593-554691:1:exon

SNX11
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: SNX11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(557196..562743)
location: region:557196-562743:-1
so has part: feature:557196-562743:-1:exon
subclass of: SO_0000010

117006703
type: Gene
SIO_000068: ncbigene

position:557196:-1
position: 557196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562743:-1
position: 562743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:557196-562743:-1:exon

SNX11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SNX11
product: sorting nexin 11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033079269.1
SIO_010081: SNX11
subclass of: SO_0000673
so part of: SNX11
location: complement(join(557196..557728,557782..558024,558896..559120,559893..559991,560079..560179,561309..561395,561874..561916,562690..562743))
location: region:557196-562743:-1
so has part: feature:562690-562743:-1:exon
so has part: feature:561874-561916:-1:exon
so has part: feature:561309-561395:-1:exon
so has part: feature:560079-560179:-1:exon
so has part: feature:559893-559991:-1:exon
so has part: feature:558896-559120:-1:exon
so has part: feature:557782-558024:-1:exon
so has part: feature:557196-557728:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:562690-562743:-1:exon

position:562690:-1
position: 562690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:561874-561916:-1:exon

position:561874:-1
position: 561874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:561916:-1
position: 561916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:561309-561395:-1:exon

position:561309:-1
position: 561309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:561395:-1
position: 561395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:560079-560179:-1:exon

position:560079:-1
position: 560079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560179:-1
position: 560179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:559893-559991:-1:exon

position:559893:-1
position: 559893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559991:-1
position: 559991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:558896-559120:-1:exon

position:558896:-1
position: 558896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559120:-1
position: 559120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:557782-558024:-1:exon

position:557782:-1
position: 557782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558024:-1
position: 558024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:557196-557728:-1:exon

position:557728:-1
position: 557728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SNX11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SNX11
product: sorting nexin 11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033079267.1
SIO_010081: SNX11
subclass of: SO_0000673
so part of: SNX11
location: complement(join(557196..558024,558896..559120,559893..559991,560079..560179,561309..561395,561874..561916,562690..562743))
location: region:557196-562743:-1
so has part: feature:562690-562743:-1:exon
so has part: feature:561874-561916:-1:exon
so has part: feature:561309-561395:-1:exon
so has part: feature:560079-560179:-1:exon
so has part: feature:559893-559991:-1:exon
so has part: feature:558896-559120:-1:exon
so has part: feature:557196-558024:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:562690-562743:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:561874-561916:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:561309-561395:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560079-560179:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:559893-559991:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:558896-559120:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:557196-558024:-1:exon

SNX11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SNX11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-11 isoform X1
translation: MLENREEELTTVRVQDPRVHNEGSWNSYVDYKIFLHTNSKAFTAKTSCVRRRYREFVWLRRQLQKNAGLVPVPELPGKSAFFVGSSDEFIERRRQGLQQFLERVVQSAVLLSDSRLHLFLQSQLPVAAIEACVQGRGPHSVTEAILHYAMAGCAWGQRGDSAGLWGQRGDSAAPPAASCAGLESFPYWGDFGMDEARPESPAGHQVTPLESPESPTGHQVTPLESPESPAGHRVTPLENLKCPAGHEMTPLENLECPAGHGVTPLESLEEPQNVQPDTE
SIO_010081: SNX11
subclass of: SO_0000673
so part of: SNX11
location: complement(join(557718..558024,558896..559120,559893..559991,560079..560179,561309..561395,561874..561894))
location: region:557718-561894:-1
so has part: feature:561874-561894:-1:exon
so has part: feature:561309-561395:-1:exon
so has part: feature:560079-560179:-1:exon
so has part: feature:559893-559991:-1:exon
so has part: feature:558896-559120:-1:exon
so has part: feature:557718-558024:-1:exon

XP_032935158.1
type: Protein
SIO_000068: ncbiprotein

position:557718:-1
position: 557718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:561894:-1
position: 561894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:561874-561894:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:561309-561395:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:560079-560179:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:559893-559991:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:558896-559120:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:557718-558024:-1:exon

SNX11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SNX11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-11 isoform X2
translation: MLENREEELTTVRVQDPRVHNEGSWNSYVDYKIFLHTNSKAFTAKTSCVRRRYREFVWLRRQLQKNAGLVPVPELPGKSAFFVGSSDEFIERRRQGLQQFLERVVQSAVLLSDSRLHLFLQSQLPVAAIEACVQGRGPHSVTEAILHYAMAGCAWGQRGDSAGLWGQRGDSAAPPAASCAGLESFPYWGDFGMDEARPESPAGHQVTPLESPESPTGHQVTPLESPESPAGHRVTPLENLKCPAGHEMTPLENLECPAGH
SIO_010081: SNX11
subclass of: SO_0000673
so part of: SNX11
location: complement(join(557722..557728,557782..558024,558896..559120,559893..559991,560079..560179,561309..561395,561874..561894))
location: region:557722-561894:-1
so has part: feature:561874-561894:-1:exon
so has part: feature:561309-561395:-1:exon
so has part: feature:560079-560179:-1:exon
so has part: feature:559893-559991:-1:exon
so has part: feature:558896-559120:-1:exon
so has part: feature:557782-558024:-1:exon
so has part: feature:557722-557728:-1:exon

XP_032935160.1
type: Protein
SIO_000068: ncbiprotein

position:557722:-1
position: 557722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:561874-561894:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:561309-561395:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:560079-560179:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:559893-559991:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:558896-559120:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:557782-558024:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:557722-557728:-1:exon

CBX1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: CBX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 563737..570731
location: region:563737-570731:1
so has part: feature:563737-570731:1:exon
subclass of: SO_0000010

117006708
type: Gene
SIO_000068: ncbigene

position:563737:1
position: 563737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570731:1
position: 570731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:563737-570731:1:exon

CBX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CBX1
product: chromobox 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033079274.2
SIO_010081: CBX1
subclass of: SO_0000673
so part of: CBX1
location: join(563737..563817,566022..566194,567614..567791,568712..568806,570371..570731)
location: region:563737-570731:1
so has part: feature:563737-563817:1:exon
so has part: feature:566022-566194:1:exon
so has part: feature:567614-567791:1:exon
so has part: feature:568712-568806:1:exon
so has part: feature:570371-570731:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:563737-563817:1:exon

position:563817:1
position: 563817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:566022-566194:1:exon

position:566022:1
position: 566022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566194:1
position: 566194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:567614-567791:1:exon

position:567614:1
position: 567614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567791:1
position: 567791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:568712-568806:1:exon

position:568712:1
position: 568712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:568806:1
position: 568806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:570371-570731:1:exon

position:570371:1
position: 570371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CBX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CBX1
product: chromobox 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033079275.2
SIO_010081: CBX1
subclass of: SO_0000673
so part of: CBX1
location: join(563737..563817,566025..566194,567614..567791,568712..568806,570371..570731)
location: region:563737-570731:1
so has part: feature:563737-563817:1:exon
so has part: feature:566025-566194:1:exon
so has part: feature:567614-567791:1:exon
so has part: feature:568712-568806:1:exon
so has part: feature:570371-570731:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:563737-563817:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:566025-566194:1:exon

position:566025:1
position: 566025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:567614-567791:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:568712-568806:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:570371-570731:1:exon

CBX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CBX1
product: chromobox 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_042779926.1
SIO_010081: CBX1
subclass of: SO_0000673
so part of: CBX1
location: join(563737..563817,566025..566194,567614..567791,568712..568806,569819..569894)
location: region:563737-569894:1
so has part: feature:563737-563817:1:exon
so has part: feature:566025-566194:1:exon
so has part: feature:567614-567791:1:exon
so has part: feature:568712-568806:1:exon
so has part: feature:569819-569894:1:exon

position:569894:1
position: 569894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:563737-563817:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:566025-566194:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:567614-567791:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:568712-568806:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:569819-569894:1:exon

position:569819:1
position: 569819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CBX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CBX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromobox protein homolog 1 isoform X1
translation: MGKKQNKKKVEEVLEEEEEEYVVEKVLDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQKTAHESEKSEGSKRKAESDTEDKGEESKPKKKKEESEKPRGFARGFEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANIKCPQVVISFYEERLTWHSYPSEDDDKKEDKN
SIO_010081: CBX1
subclass of: SO_0000673
so part of: CBX1
location: join(566055..566194,567614..567791,568712..568806,570371..570515)
location: region:566055-570515:1
so has part: feature:566055-566194:1:exon
so has part: feature:567614-567791:1:exon
so has part: feature:568712-568806:1:exon
so has part: feature:570371-570515:1:exon

XP_032935165.1
type: Protein
SIO_000068: ncbiprotein

position:566055:1
position: 566055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570515:1
position: 570515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:566055-566194:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:567614-567791:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:568712-568806:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:570371-570515:1:exon

CBX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CBX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromobox protein homolog 1 isoform X1
translation: MGKKQNKKKVEEVLEEEEEEYVVEKVLDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQKTAHESEKSEGSKRKAESDTEDKGEESKPKKKKEESEKPRGFARGFEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANIKCPQVVISFYEERLTWHSYPSEDDDKKEDKN
SIO_010081: CBX1
subclass of: SO_0000673
so part of: CBX1
location: join(566055..566194,567614..567791,568712..568806,570371..570515)
location: region:566055-570515:1
so has part: feature:566055-566194:1:exon
so has part: feature:567614-567791:1:exon
so has part: feature:568712-568806:1:exon
so has part: feature:570371-570515:1:exon

XP_032935166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:566055-566194:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:567614-567791:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:568712-568806:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:570371-570515:1:exon

CBX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CBX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromobox protein homolog 1 isoform X2
translation: MGKKQNKKKVEEVLEEEEEEYVVEKVLDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQKTAHESEKSEGSKRKAESDTEDKGEESKPKKKKEESEKPRGFARGFEPERIIGATDSSGELMFLMKWKNSDEADLVPAKGQDQDQN
SIO_010081: CBX1
subclass of: SO_0000673
so part of: CBX1
location: join(566055..566194,567614..567791,568712..568806,569819..569879)
location: region:566055-569879:1
so has part: feature:566055-566194:1:exon
so has part: feature:567614-567791:1:exon
so has part: feature:568712-568806:1:exon
so has part: feature:569819-569879:1:exon

XP_042635860.1
type: Protein
SIO_000068: ncbiprotein

position:569879:1
position: 569879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:566055-566194:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:567614-567791:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:568712-568806:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:569819-569879:1:exon

NFE2L1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: NFE2L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(574558..585523)
location: region:574558-585523:-1
so has part: feature:574558-585523:-1:exon
subclass of: SO_0000010

117006467
type: Gene
SIO_000068: ncbigene

position:574558:-1
position: 574558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585523:-1
position: 585523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:574558-585523:-1:exon

NFE2L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NFE2L1
product: nuclear factor, erythroid 2 like 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033078937.2
SIO_010081: NFE2L1
subclass of: SO_0000673
so part of: NFE2L1
location: complement(join(574558..577738,577934..578089,578733..578822,584078..584562,584992..585215,585357..585523))
location: region:574558-585523:-1
so has part: feature:585357-585523:-1:exon
so has part: feature:584992-585215:-1:exon
so has part: feature:584078-584562:-1:exon
so has part: feature:578733-578822:-1:exon
so has part: feature:577934-578089:-1:exon
so has part: feature:574558-577738:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:585357-585523:-1:exon

position:585357:-1
position: 585357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:584992-585215:-1:exon

position:584992:-1
position: 584992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585215:-1
position: 585215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:584078-584562:-1:exon

position:584078:-1
position: 584078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584562:-1
position: 584562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:578733-578822:-1:exon

position:578733:-1
position: 578733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578822:-1
position: 578822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:577934-578089:-1:exon

position:577934:-1
position: 577934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578089:-1
position: 578089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:574558-577738:-1:exon

position:577738:-1
position: 577738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NFE2L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NFE2L1
product: nuclear factor, erythroid 2 like 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033078936.2
SIO_010081: NFE2L1
subclass of: SO_0000673
so part of: NFE2L1
location: complement(join(574558..577738,577934..578089,578733..578822,579208..579423,584078..584562,584992..585215,585357..585523))
location: region:574558-585523:-1
so has part: feature:585357-585523:-1:exon
so has part: feature:584992-585215:-1:exon
so has part: feature:584078-584562:-1:exon
so has part: feature:579208-579423:-1:exon
so has part: feature:578733-578822:-1:exon
so has part: feature:577934-578089:-1:exon
so has part: feature:574558-577738:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:585357-585523:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:584992-585215:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:584078-584562:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:579208-579423:-1:exon

position:579208:-1
position: 579208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579423:-1
position: 579423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:578733-578822:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:577934-578089:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:574558-577738:-1:exon

NFE2L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NFE2L1
product: nuclear factor, erythroid 2 like 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033078934.2
SIO_010081: NFE2L1
subclass of: SO_0000673
so part of: NFE2L1
location: complement(join(574558..577738,577934..578089,578733..578822,579208..579423,581264..581431))
location: region:574558-581431:-1
so has part: feature:581264-581431:-1:exon
so has part: feature:579208-579423:-1:exon
so has part: feature:578733-578822:-1:exon
so has part: feature:577934-578089:-1:exon
so has part: feature:574558-577738:-1:exon

position:581431:-1
position: 581431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581264-581431:-1:exon

position:581264:-1
position: 581264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:579208-579423:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:578733-578822:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:577934-578089:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:574558-577738:-1:exon

NFE2L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NFE2L1
product: nuclear factor, erythroid 2 like 1, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033078939.1
SIO_010081: NFE2L1
subclass of: SO_0000673
so part of: NFE2L1
location: complement(join(574558..577738,577934..578089,578733..578822,579208..579423,579940..580045))
location: region:574558-580045:-1
so has part: feature:579940-580045:-1:exon
so has part: feature:579208-579423:-1:exon
so has part: feature:578733-578822:-1:exon
so has part: feature:577934-578089:-1:exon
so has part: feature:574558-577738:-1:exon

position:580045:-1
position: 580045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:579940-580045:-1:exon

position:579940:-1
position: 579940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:579208-579423:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:578733-578822:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:577934-578089:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:574558-577738:-1:exon

NFE2L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NFE2L1
product: nuclear factor, erythroid 2 like 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033078938.1
SIO_010081: NFE2L1
subclass of: SO_0000673
so part of: NFE2L1
location: complement(join(574558..577738,577934..578089,578733..578822,579208..579423,579543..579626))
location: region:574558-579626:-1
so has part: feature:579543-579626:-1:exon
so has part: feature:579208-579423:-1:exon
so has part: feature:578733-578822:-1:exon
so has part: feature:577934-578089:-1:exon
so has part: feature:574558-577738:-1:exon

position:579626:-1
position: 579626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:579543-579626:-1:exon

position:579543:-1
position: 579543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:579208-579423:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:578733-578822:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:577934-578089:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:574558-577738:-1:exon

NFE2L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: NFE2L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum membrane sensor NFE2L1 isoform X3
translation: MLSLKKYFTEGLIQFTILLSLIGVRVDVDTYLNSQLPPLREIILGQSSAYTQTQFHNLRNTLDGYGIHPKSVELDYYFTARRLLSQVRALDRFQVPSTEVSAWLVHRDPEGAVSGGQPGAVQDGGAGDGGVRESGAEQGFGEELEDLGAVAAPVNGDLTKEVPGAEDQTALSLEECLRLLEATFPFGDNSEFPAADVSALSEAVPGQSRAPGPSPLSPLLAETESPFDLEQQWQDLMSIMEMQAMEVNSTSAESLYGGTGGDLLASNYSLAAGTPINQNVSLHQASLGSCSQDFSLFSSDMESPSSMAGGSALLQLAPDNSTGLNSTFGSTNLSGIFFPPQMNSTGNETAGPELPDPLGGLLDEAMLDEISLMDLAIEEGFNPVQASQLEEEFDSDSGLSLDSGHSPASLSSSEASSSSSSSSSSSSSSSFSEEGAVGYSSDSENVDFEEAEGAVGYQPEYSKFCRMSYQDPAQLHYLPYLEHVGHNHTYNMAPGALDPEEPKAPGAGKKSGKEKPSELLDKQLSRDEHRARAMKIPFTNDKIINLPVEEFNELLSKYQLSEAQLSLIRDIRRRGKNKMAAQNCRKRKLDTILNLERDVEELQRDKSKLLREKVEFLKSIRQMKQKVQSLYQEVFGRLRDEQGRPYSPSRYALQYGSDGSVLLIPRAPAPAEPQPRRQERKQKDRRK
SIO_010081: NFE2L1
subclass of: SO_0000673
so part of: NFE2L1
location: complement(join(576404..577738,577934..578089,578733..578822,584078..584560))
location: region:576404-584560:-1
so has part: feature:584078-584560:-1:exon
so has part: feature:578733-578822:-1:exon
so has part: feature:577934-578089:-1:exon
so has part: feature:576404-577738:-1:exon

XP_032934828.1
type: Protein
SIO_000068: ncbiprotein

position:576404:-1
position: 576404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584560:-1
position: 584560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584078-584560:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:578733-578822:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:577934-578089:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:576404-577738:-1:exon

NFE2L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: NFE2L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum membrane sensor NFE2L1 isoform X2
translation: MLSLKKYFTEGLIQFTILLSLIGVRVDVDTYLNSQLPPLREIILGQSSAYTQTQFHNLRNTLDGYGIHPKSVELDYYFTARRLLSQVRALDRFQVPSTEVSAWLVHRDPEGAVSGGQPGAVQDGGAGDGGVRESGAEQGFGEELEDLGAVAAPVNGDLTKEDIDLIDILWRQDIDLGAGREIFDYSHRQKESEVDKELSDGRERGDSWRSAGNEVLDRIPLVDGETGESFPAQVPGAEDQTALSLEECLRLLEATFPFGDNSEFPAADVSALSEAVPGQSRAPGPSPLSPLLAETESPFDLEQQWQDLMSIMEMQAMEVNSTSAESLYGGTGGDLLASNYSLAAGTPINQNVSLHQASLGSCSQDFSLFSSDMESPSSMAGGSALLQLAPDNSTGLNSTFGSTNLSGIFFPPQMNSTGNETAGPELPDPLGGLLDEAMLDEISLMDLAIEEGFNPVQASQLEEEFDSDSGLSLDSGHSPASLSSSEASSSSSSSSSSSSSSSFSEEGAVGYSSDSENVDFEEAEGAVGYQPEYSKFCRMSYQDPAQLHYLPYLEHVGHNHTYNMAPGALDPEEPKAPGAGKKSGKEKPSELLDKQLSRDEHRARAMKIPFTNDKIINLPVEEFNELLSKYQLSEAQLSLIRDIRRRGKNKMAAQNCRKRKLDTILNLERDVEELQRDKSKLLREKVEFLKSIRQMKQKVQSLYQEVFGRLRDEQGRPYSPSRYALQYGSDGSVLLIPRAPAPAEPQPRRQERKQKDRRK
SIO_010081: NFE2L1
subclass of: SO_0000673
so part of: NFE2L1
location: complement(join(576404..577738,577934..578089,578733..578822,579208..579423,584078..584560))
location: region:576404-584560:-1
so has part: feature:584078-584560:-1:exon
so has part: feature:579208-579423:-1:exon
so has part: feature:578733-578822:-1:exon
so has part: feature:577934-578089:-1:exon
so has part: feature:576404-577738:-1:exon

XP_032934827.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:584078-584560:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:579208-579423:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:578733-578822:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:577934-578089:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576404-577738:-1:exon

NFE2L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: NFE2L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum membrane sensor NFE2L1 isoform X1
translation: MTFSGTLRLPDIDLIDILWRQDIDLGAGREIFDYSHRQKESEVDKELSDGRERGDSWRSAGNEVLDRIPLVDGETGESFPAQVPGAEDQTALSLEECLRLLEATFPFGDNSEFPAADVSALSEAVPGQSRAPGPSPLSPLLAETESPFDLEQQWQDLMSIMEMQAMEVNSTSAESLYGGTGGDLLASNYSLAAGTPINQNVSLHQASLGSCSQDFSLFSSDMESPSSMAGGSALLQLAPDNSTGLNSTFGSTNLSGIFFPPQMNSTGNETAGPELPDPLGGLLDEAMLDEISLMDLAIEEGFNPVQASQLEEEFDSDSGLSLDSGHSPASLSSSEASSSSSSSSSSSSSSSFSEEGAVGYSSDSENVDFEEAEGAVGYQPEYSKFCRMSYQDPAQLHYLPYLEHVGHNHTYNMAPGALDPEEPKAPGAGKKSGKEKPSELLDKQLSRDEHRARAMKIPFTNDKIINLPVEEFNELLSKYQLSEAQLSLIRDIRRRGKNKMAAQNCRKRKLDTILNLERDVEELQRDKSKLLREKVEFLKSIRQMKQKVQSLYQEVFGRLRDEQGRPYSPSRYALQYGSDGSVLLIPRAPAPAEPQPRRQERKQKDRRK
SIO_010081: NFE2L1
subclass of: SO_0000673
so part of: NFE2L1
location: complement(join(576404..577738,577934..578089,578733..578822,579208..579423,581264..581293))
location: region:576404-581293:-1
so has part: feature:581264-581293:-1:exon
so has part: feature:579208-579423:-1:exon
so has part: feature:578733-578822:-1:exon
so has part: feature:577934-578089:-1:exon
so has part: feature:576404-577738:-1:exon

XP_032934825.1
type: Protein
SIO_000068: ncbiprotein

position:581293:-1
position: 581293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581264-581293:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:579208-579423:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:578733-578822:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:577934-578089:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576404-577738:-1:exon

NFE2L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: NFE2L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum membrane sensor NFE2L1 isoform X5
translation: MRKDIDLIDILWRQDIDLGAGREIFDYSHRQKESEVDKELSDGRERGDSWRSAGNEVLDRIPLVDGETGESFPAQVPGAEDQTALSLEECLRLLEATFPFGDNSEFPAADVSALSEAVPGQSRAPGPSPLSPLLAETESPFDLEQQWQDLMSIMEMQAMEVNSTSAESLYGGTGGDLLASNYSLAAGTPINQNVSLHQASLGSCSQDFSLFSSDMESPSSMAGGSALLQLAPDNSTGLNSTFGSTNLSGIFFPPQMNSTGNETAGPELPDPLGGLLDEAMLDEISLMDLAIEEGFNPVQASQLEEEFDSDSGLSLDSGHSPASLSSSEASSSSSSSSSSSSSSSFSEEGAVGYSSDSENVDFEEAEGAVGYQPEYSKFCRMSYQDPAQLHYLPYLEHVGHNHTYNMAPGALDPEEPKAPGAGKKSGKEKPSELLDKQLSRDEHRARAMKIPFTNDKIINLPVEEFNELLSKYQLSEAQLSLIRDIRRRGKNKMAAQNCRKRKLDTILNLERDVEELQRDKSKLLREKVEFLKSIRQMKQKVQSLYQEVFGRLRDEQGRPYSPSRYALQYGSDGSVLLIPRAPAPAEPQPRRQERKQKDRRK
SIO_010081: NFE2L1
subclass of: SO_0000673
so part of: NFE2L1
location: complement(join(576404..577738,577934..578089,578733..578822,579208..579423,579940..579948))
location: region:576404-579948:-1
so has part: feature:579940-579948:-1:exon
so has part: feature:579208-579423:-1:exon
so has part: feature:578733-578822:-1:exon
so has part: feature:577934-578089:-1:exon
so has part: feature:576404-577738:-1:exon

XP_032934830.1
type: Protein
SIO_000068: ncbiprotein

position:579948:-1
position: 579948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:579940-579948:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:579208-579423:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:578733-578822:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:577934-578089:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576404-577738:-1:exon

NFE2L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: NFE2L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum membrane sensor NFE2L1 isoform X4
translation: MRSPQSRSRPARGAPEPRRRRRRRGARRDIDLIDILWRQDIDLGAGREIFDYSHRQKESEVDKELSDGRERGDSWRSAGNEVLDRIPLVDGETGESFPAQVPGAEDQTALSLEECLRLLEATFPFGDNSEFPAADVSALSEAVPGQSRAPGPSPLSPLLAETESPFDLEQQWQDLMSIMEMQAMEVNSTSAESLYGGTGGDLLASNYSLAAGTPINQNVSLHQASLGSCSQDFSLFSSDMESPSSMAGGSALLQLAPDNSTGLNSTFGSTNLSGIFFPPQMNSTGNETAGPELPDPLGGLLDEAMLDEISLMDLAIEEGFNPVQASQLEEEFDSDSGLSLDSGHSPASLSSSEASSSSSSSSSSSSSSSFSEEGAVGYSSDSENVDFEEAEGAVGYQPEYSKFCRMSYQDPAQLHYLPYLEHVGHNHTYNMAPGALDPEEPKAPGAGKKSGKEKPSELLDKQLSRDEHRARAMKIPFTNDKIINLPVEEFNELLSKYQLSEAQLSLIRDIRRRGKNKMAAQNCRKRKLDTILNLERDVEELQRDKSKLLREKVEFLKSIRQMKQKVQSLYQEVFGRLRDEQGRPYSPSRYALQYGSDGSVLLIPRAPAPAEPQPRRQERKQKDRRK
SIO_010081: NFE2L1
subclass of: SO_0000673
so part of: NFE2L1
location: complement(join(576404..577738,577934..578089,578733..578822,579208..579423,579543..579626))
location: region:576404-579626:-1
so has part: feature:579543-579626:-1:exon
so has part: feature:579208-579423:-1:exon
so has part: feature:578733-578822:-1:exon
so has part: feature:577934-578089:-1:exon
so has part: feature:576404-577738:-1:exon

XP_032934829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:579543-579626:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:579208-579423:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:578733-578822:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:577934-578089:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576404-577738:-1:exon

TRNAC-GCA
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: TRNAC-GCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 599884..599955
location: region:599884-599955:1
so has part: feature:599884-599955:1:exon
subclass of: SO_0000663

117006715
type: Gene
SIO_000068: ncbigene

position:599884:1
position: 599884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599955:1
position: 599955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:599884-599955:1:exon

TRNAC-GCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 91951
gene: TRNAC-GCA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:599916..599918,aa:Cys,seq:gca)
SIO_010081: TRNAC-GCA
subclass of: SO_0000673
so part of: TRNAC-GCA
location: 599884..599955
location: region:599884-599955:1
so has part: feature:599884-599955:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:599884-599955:1:exon

TRNAC-GCA
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: TRNAC-GCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 600455..600526
location: region:600455-600526:1
so has part: feature:600455-600526:1:exon
subclass of: SO_0000663

117006726
type: Gene
SIO_000068: ncbigene

position:600455:1
position: 600455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600526:1
position: 600526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:600455-600526:1:exon

TRNAC-GCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 91951
gene: TRNAC-GCA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:600487..600489,aa:Cys,seq:gca)
SIO_010081: TRNAC-GCA
subclass of: SO_0000673
so part of: TRNAC-GCA
location: 600455..600526
location: region:600455-600526:1
so has part: feature:600455-600526:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:600455-600526:1:exon

TRNAC-GCA
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: TRNAC-GCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 600853..600924
location: region:600853-600924:1
so has part: feature:600853-600924:1:exon
subclass of: SO_0000663

117006730
type: Gene
SIO_000068: ncbigene

position:600853:1
position: 600853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600924:1
position: 600924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:600853-600924:1:exon

TRNAC-GCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 91951
gene: TRNAC-GCA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:600885..600887,aa:Cys,seq:gca)
SIO_010081: TRNAC-GCA
subclass of: SO_0000673
so part of: TRNAC-GCA
location: 600853..600924
location: region:600853-600924:1
so has part: feature:600853-600924:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:600853-600924:1:exon

TRNAC-GCA
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: TRNAC-GCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 601239..601310
location: region:601239-601310:1
so has part: feature:601239-601310:1:exon
subclass of: SO_0000663

117006731
type: Gene
SIO_000068: ncbigene

position:601239:1
position: 601239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601310:1
position: 601310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:601239-601310:1:exon

TRNAC-GCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 91951
gene: TRNAC-GCA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:601271..601273,aa:Cys,seq:gca)
SIO_010081: TRNAC-GCA
subclass of: SO_0000673
so part of: TRNAC-GCA
location: 601239..601310
location: region:601239-601310:1
so has part: feature:601239-601310:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:601239-601310:1:exon

TRNAC-GCA
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: TRNAC-GCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 601565..601636
location: region:601565-601636:1
so has part: feature:601565-601636:1:exon
subclass of: SO_0000663

117006732
type: Gene
SIO_000068: ncbigene

position:601565:1
position: 601565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601636:1
position: 601636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:601565-601636:1:exon

TRNAC-GCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 91951
gene: TRNAC-GCA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:601597..601599,aa:Cys,seq:gca)
SIO_010081: TRNAC-GCA
subclass of: SO_0000673
so part of: TRNAC-GCA
location: 601565..601636
location: region:601565-601636:1
so has part: feature:601565-601636:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:601565-601636:1:exon

TRNAC-GCA
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: TRNAC-GCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 601959..602030
location: region:601959-602030:1
so has part: feature:601959-602030:1:exon
subclass of: SO_0000663

117006716
type: Gene
SIO_000068: ncbigene

position:601959:1
position: 601959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602030:1
position: 602030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:601959-602030:1:exon

TRNAC-GCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 91951
gene: TRNAC-GCA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:601991..601993,aa:Cys,seq:gca)
SIO_010081: TRNAC-GCA
subclass of: SO_0000673
so part of: TRNAC-GCA
location: 601959..602030
location: region:601959-602030:1
so has part: feature:601959-602030:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:601959-602030:1:exon

TRNAC-GCA
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: TRNAC-GCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 602354..602425
location: region:602354-602425:1
so has part: feature:602354-602425:1:exon
subclass of: SO_0000663

117006717
type: Gene
SIO_000068: ncbigene

position:602354:1
position: 602354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602425:1
position: 602425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:602354-602425:1:exon

TRNAC-GCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 91951
gene: TRNAC-GCA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:602386..602388,aa:Cys,seq:gca)
SIO_010081: TRNAC-GCA
subclass of: SO_0000673
so part of: TRNAC-GCA
location: 602354..602425
location: region:602354-602425:1
so has part: feature:602354-602425:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:602354-602425:1:exon

TRNAC-GCA
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: TRNAC-GCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 602745..602816
location: region:602745-602816:1
so has part: feature:602745-602816:1:exon
subclass of: SO_0000663

117006718
type: Gene
SIO_000068: ncbigene

position:602745:1
position: 602745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602816:1
position: 602816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:602745-602816:1:exon

TRNAC-GCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 91951
gene: TRNAC-GCA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:602777..602779,aa:Cys,seq:gca)
SIO_010081: TRNAC-GCA
subclass of: SO_0000673
so part of: TRNAC-GCA
location: 602745..602816
location: region:602745-602816:1
so has part: feature:602745-602816:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:602745-602816:1:exon

TRNAC-GCA
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: TRNAC-GCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 603138..603209
location: region:603138-603209:1
so has part: feature:603138-603209:1:exon
subclass of: SO_0000663

117006719
type: Gene
SIO_000068: ncbigene

position:603138:1
position: 603138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603209:1
position: 603209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603138-603209:1:exon

TRNAC-GCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 91951
gene: TRNAC-GCA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:603170..603172,aa:Cys,seq:gca)
SIO_010081: TRNAC-GCA
subclass of: SO_0000673
so part of: TRNAC-GCA
location: 603138..603209
location: region:603138-603209:1
so has part: feature:603138-603209:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:603138-603209:1:exon

CWC25
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: CWC25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 604818..615915
location: region:604818-615915:1
so has part: feature:604818-615915:1:exon
subclass of: SO_0000010

117006437
type: Gene
SIO_000068: ncbigene

position:604818:1
position: 604818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615915:1
position: 615915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:604818-615915:1:exon

CWC25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CWC25
product: CWC25 spliceosome associated protein homolog
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033078895.2
SIO_010081: CWC25
subclass of: SO_0000673
so part of: CWC25
location: join(604818..604895,606278..606450,608181..608417,609481..609550,610703..610833,610980..611049,611926..612005,613577..613660,614597..614758,615330..615915)
location: region:604818-615915:1
so has part: feature:604818-604895:1:exon
so has part: feature:606278-606450:1:exon
so has part: feature:608181-608417:1:exon
so has part: feature:609481-609550:1:exon
so has part: feature:610703-610833:1:exon
so has part: feature:610980-611049:1:exon
so has part: feature:611926-612005:1:exon
so has part: feature:613577-613660:1:exon
so has part: feature:614597-614758:1:exon
so has part: feature:615330-615915:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:604818-604895:1:exon

position:604895:1
position: 604895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:606278-606450:1:exon

position:606278:1
position: 606278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:606450:1
position: 606450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:608181-608417:1:exon

position:608181:1
position: 608181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608417:1
position: 608417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:609481-609550:1:exon

position:609481:1
position: 609481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:609550:1
position: 609550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:610703-610833:1:exon

position:610703:1
position: 610703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:610833:1
position: 610833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:610980-611049:1:exon

position:610980:1
position: 610980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611049:1
position: 611049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:611926-612005:1:exon

position:611926:1
position: 611926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:612005:1
position: 612005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:613577-613660:1:exon

position:613577:1
position: 613577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:613660:1
position: 613660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:614597-614758:1:exon

position:614597:1
position: 614597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614758:1
position: 614758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:615330-615915:1:exon

position:615330:1
position: 615330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CWC25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CWC25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor CWC25 homolog
translation: MGGGDLNLKKSWHPQTLRNVEKVWKAEQKHEAERRKIEELQRELQEERAREEMQRYAEDMGTVRKREEKLEWMYQGPGGMVNRDEYLLGRPVDKFILDKVGDKDSAASEDTGLLPGSIFARAGASSVLDMATKIREDPLFMIRKREEEKKREVLNNPVKMKKIKALLQSSLEKKERKRKKEKKRKHKKHRRRSSSSSSSSSSEEDRAPKKSQKKVESSSCKAAPSKIPGYGLQLRDPEQSQPQQGHQGHQGHSSRSHSRQHSREEKSRARSPSPKKSFRRQQPSGYTRKISPEELERKRQEMMENAKWREEERANNLRKHRREEELERELQKLDSRDGKFFHRLKLESASTSSLEDRVKRNIHSLQRTPAALEKNFMQR
SIO_010081: CWC25
subclass of: SO_0000673
so part of: CWC25
location: join(604878..604895,606278..606450,608181..608417,609481..609550,610703..610833,610980..611049,611926..612005,613577..613660,614597..614758,615330..615444)
location: region:604878-615444:1
so has part: feature:604878-604895:1:exon
so has part: feature:606278-606450:1:exon
so has part: feature:608181-608417:1:exon
so has part: feature:609481-609550:1:exon
so has part: feature:610703-610833:1:exon
so has part: feature:610980-611049:1:exon
so has part: feature:611926-612005:1:exon
so has part: feature:613577-613660:1:exon
so has part: feature:614597-614758:1:exon
so has part: feature:615330-615444:1:exon

XP_032934786.1
type: Protein
SIO_000068: ncbiprotein

position:604878:1
position: 604878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615444:1
position: 615444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:604878-604895:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:606278-606450:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:608181-608417:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:609481-609550:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:610703-610833:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:610980-611049:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:611926-612005:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:613577-613660:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:614597-614758:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:615330-615444:1:exon

PIP4K2B
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: PIP4K2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 616700..643761
location: region:616700-643761:1
so has part: feature:616700-643761:1:exon
subclass of: SO_0000010

117006701
type: Gene
SIO_000068: ncbigene

position:616700:1
position: 616700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643761:1
position: 643761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:616700-643761:1:exon

PIP4K2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PIP4K2B
product: phosphatidylinositol-5-phosphate 4-kinase type 2 beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033079265.2
SIO_010081: PIP4K2B
subclass of: SO_0000673
so part of: PIP4K2B
location: join(616700..616885,629735..629832,631313..631409,634241..634393,635652..635798,637183..637221,637415..637528,639535..639793,641320..641423,642163..643761)
location: region:616700-643761:1
so has part: feature:616700-616885:1:exon
so has part: feature:629735-629832:1:exon
so has part: feature:631313-631409:1:exon
so has part: feature:634241-634393:1:exon
so has part: feature:635652-635798:1:exon
so has part: feature:637183-637221:1:exon
so has part: feature:637415-637528:1:exon
so has part: feature:639535-639793:1:exon
so has part: feature:641320-641423:1:exon
so has part: feature:642163-643761:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:616700-616885:1:exon

position:616885:1
position: 616885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:629735-629832:1:exon

position:629735:1
position: 629735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:629832:1
position: 629832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:631313-631409:1:exon

position:631313:1
position: 631313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631409:1
position: 631409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:634241-634393:1:exon

position:634241:1
position: 634241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:634393:1
position: 634393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:635652-635798:1:exon

position:635652:1
position: 635652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635798:1
position: 635798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:637183-637221:1:exon

position:637183:1
position: 637183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:637221:1
position: 637221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:637415-637528:1:exon

position:637415:1
position: 637415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:637528:1
position: 637528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:639535-639793:1:exon

position:639535:1
position: 639535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639793:1
position: 639793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:641320-641423:1:exon

position:641320:1
position: 641320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:641423:1
position: 641423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:642163-643761:1:exon

position:642163:1
position: 642163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PIP4K2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PIP4K2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 5-phosphate 4-kinase type-2 beta
translation: MAANCAGAAGTAAGAVAAVGSALSASKTKTKKKHFVCQKVKLFRASEPLLSVLMWGANHTINELSNVPVPVMLMPDDFKAYSKIKVDNHLFNKENLPSRFKFKEYCPLVFRNLRERFGIDDQDYQNSVTRSAPVNSDSQGRCGARFLTTYDRRFVIKAVSSEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVETYMVVTRNVFSHRLTVHRKYDLKGSTVSREASDKEKAKDLPTFKDNDFLNEGQKLHVGEESKKNFLEKLKRDVEFLAQLKIMDYSLLVGIHDVDRAEQEEMEVEERAEDEECENDGLGGNPISSYGTPPDSPGNLLNYPRFFGPGEFDPSVDVYAMKSHESAPRKEVYFMAIIDILTPYDTKKKAAHAAKTVKHGAGAEISTVNPEQYSKRFNDFISNILT
SIO_010081: PIP4K2B
subclass of: SO_0000673
so part of: PIP4K2B
location: join(616706..616885,629735..629832,631313..631409,634241..634393,635652..635798,637183..637221,637415..637528,639535..639793,641320..641423,642163..642243)
location: region:616706-642243:1
so has part: feature:616706-616885:1:exon
so has part: feature:629735-629832:1:exon
so has part: feature:631313-631409:1:exon
so has part: feature:634241-634393:1:exon
so has part: feature:635652-635798:1:exon
so has part: feature:637183-637221:1:exon
so has part: feature:637415-637528:1:exon
so has part: feature:639535-639793:1:exon
so has part: feature:641320-641423:1:exon
so has part: feature:642163-642243:1:exon

XP_032935156.1
type: Protein
SIO_000068: ncbiprotein

position:616706:1
position: 616706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:642243:1
position: 642243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:616706-616885:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:629735-629832:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:631313-631409:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:634241-634393:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:635652-635798:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:637183-637221:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637415-637528:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:639535-639793:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:641320-641423:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:642163-642243:1:exon

PSMB3
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: PSMB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(649978..654300)
location: region:649978-654300:-1
so has part: feature:649978-654300:-1:exon
subclass of: SO_0000010

117006429
type: Gene
SIO_000068: ncbigene

position:649978:-1
position: 649978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654300:-1
position: 654300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:649978-654300:-1:exon

PSMB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PSMB3
product: proteasome 20S subunit beta 3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033078882.2
SIO_010081: PSMB3
subclass of: SO_0000673
so part of: PSMB3
location: complement(join(649978..650078,650710..650804,652177..652354,653114..653221,653874..654058,654172..654300))
location: region:649978-654300:-1
so has part: feature:654172-654300:-1:exon
so has part: feature:653874-654058:-1:exon
so has part: feature:653114-653221:-1:exon
so has part: feature:652177-652354:-1:exon
so has part: feature:650710-650804:-1:exon
so has part: feature:649978-650078:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:654172-654300:-1:exon

position:654172:-1
position: 654172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:653874-654058:-1:exon

position:653874:-1
position: 653874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654058:-1
position: 654058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:653114-653221:-1:exon

position:653114:-1
position: 653114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:653221:-1
position: 653221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:652177-652354:-1:exon

position:652177:-1
position: 652177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:652354:-1
position: 652354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:650710-650804:-1:exon

position:650710:-1
position: 650710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:650804:-1
position: 650804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:649978-650078:-1:exon

position:650078:-1
position: 650078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSMB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PSMB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome subunit beta type-3
translation: MSIMSYNGGAVMAMRGKDCVAIAADRRFGIQAQTVTTDFQKIFPMGQRLYIGLAGLATDVQTVAQRLKFRLNLYELKEGRQIKPQTFMSMVSNLLYERRFGPYYTEPVIAGLDPLTLEPFICSLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPDMEPEHLFETISQAMLNAVDRDAISGMGVVVHVIEKDKVTTRTLKARMD
SIO_010081: PSMB3
subclass of: SO_0000673
so part of: PSMB3
location: complement(join(650030..650078,650710..650804,652177..652354,653114..653221,653874..654058,654172..654174))
location: region:650030-654174:-1
so has part: feature:654172-654174:-1:exon
so has part: feature:653874-654058:-1:exon
so has part: feature:653114-653221:-1:exon
so has part: feature:652177-652354:-1:exon
so has part: feature:650710-650804:-1:exon
so has part: feature:650030-650078:-1:exon

XP_032934773.1
type: Protein
SIO_000068: ncbiprotein

position:650030:-1
position: 650030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654174:-1
position: 654174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:654172-654174:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:653874-654058:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:653114-653221:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:652177-652354:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:650710-650804:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:650030-650078:-1:exon

TRNAN-GUU
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: TRNAN-GUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(655730..655802)
location: region:655730-655802:-1
so has part: feature:655730-655802:-1:exon
subclass of: SO_0000663

117006722
type: Gene
SIO_000068: ncbigene

position:655730:-1
position: 655730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:655802:-1
position: 655802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:655730-655802:-1:exon

TRNAN-GUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 91951
gene: TRNAN-GUU
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(655766..655768),aa:Asn,seq:gtt)
SIO_010081: TRNAN-GUU
subclass of: SO_0000673
so part of: TRNAN-GUU
location: complement(655730..655802)
location: region:655730-655802:-1
so has part: feature:655730-655802:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:655730-655802:-1:exon

PCGF2
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: PCGF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 657914..667513
location: region:657914-667513:1
so has part: feature:657914-667513:1:exon
subclass of: SO_0000010

117006668
type: Gene
SIO_000068: ncbigene

position:657914:1
position: 657914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:667513:1
position: 667513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:657914-667513:1:exon

PCGF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PCGF2
product: polycomb group ring finger 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033079223.1
SIO_010081: PCGF2
subclass of: SO_0000673
so part of: PCGF2
location: join(657914..657974,660346..660483,660680..660776,661459..661514,661808..661858,662634..662743,663677..663725,664419..664535,665794..665876,666401..667513)
location: region:657914-667513:1
so has part: feature:657914-657974:1:exon
so has part: feature:660346-660483:1:exon
so has part: feature:660680-660776:1:exon
so has part: feature:661459-661514:1:exon
so has part: feature:661808-661858:1:exon
so has part: feature:662634-662743:1:exon
so has part: feature:663677-663725:1:exon
so has part: feature:664419-664535:1:exon
so has part: feature:665794-665876:1:exon
so has part: feature:666401-667513:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:657914-657974:1:exon

position:657974:1
position: 657974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:660346-660483:1:exon

position:660346:1
position: 660346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660483:1
position: 660483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:660680-660776:1:exon

position:660680:1
position: 660680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660776:1
position: 660776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:661459-661514:1:exon

position:661459:1
position: 661459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:661514:1
position: 661514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:661808-661858:1:exon

position:661808:1
position: 661808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:661858:1
position: 661858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:662634-662743:1:exon

position:662634:1
position: 662634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:662743:1
position: 662743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:663677-663725:1:exon

position:663677:1
position: 663677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663725:1
position: 663725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:664419-664535:1:exon

position:664419:1
position: 664419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:664535:1
position: 664535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:665794-665876:1:exon

position:665794:1
position: 665794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:665876:1
position: 665876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:666401-667513:1:exon

position:666401:1
position: 666401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCGF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PCGF2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: polycomb group RING finger protein 2
translation: MHRTTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPVAEVPLGSQEERGEVAEREQGAVPEDEIVSLSIEFHRDPSEEQKGAEENGDLDKDKAPPCPPGPALRFLRCPAAMTVLHLAKFLRNKMDVPSKYRVEVLYENEPLKEYYTLMDIAYIYPWRRTGPLALKYRVQPACKRLRLCPALPSEGTNTSGASECESGSGQSAEPRAGINPRAGINPRAGIAPRAGIAPRPAQPRSCPSRVPHSPVLPRTVTAATQLSPPATQLSPDAPQLSPRCHPPAAAKPP
SIO_010081: PCGF2
subclass of: SO_0000673
so part of: PCGF2
location: join(660372..660483,660680..660776,661459..661514,661808..661858,662634..662743,663677..663725,664419..664535,665794..665876,666401..666778)
location: region:660372-666778:1
so has part: feature:660372-660483:1:exon
so has part: feature:660680-660776:1:exon
so has part: feature:661459-661514:1:exon
so has part: feature:661808-661858:1:exon
so has part: feature:662634-662743:1:exon
so has part: feature:663677-663725:1:exon
so has part: feature:664419-664535:1:exon
so has part: feature:665794-665876:1:exon
so has part: feature:666401-666778:1:exon

XP_032935114.1
type: Protein
SIO_000068: ncbiprotein

position:660372:1
position: 660372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:666778:1
position: 666778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660372-660483:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:660680-660776:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:661459-661514:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:661808-661858:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:662634-662743:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:663677-663725:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:664419-664535:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:665794-665876:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:666401-666778:1:exon

CISD3
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: CISD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(668857..670343)
location: region:668857-670343:-1
so has part: feature:668857-670343:-1:exon
subclass of: SO_0000010

117006669
type: Gene
SIO_000068: ncbigene

position:668857:-1
position: 668857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670343:-1
position: 670343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:668857-670343:-1:exon

CISD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CISD3
product: CDGSH iron sulfur domain 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033079224.1
SIO_010081: CISD3
subclass of: SO_0000673
so part of: CISD3
location: complement(join(668857..669532,669979..670343))
location: region:668857-670343:-1
so has part: feature:669979-670343:-1:exon
so has part: feature:668857-669532:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:669979-670343:-1:exon

position:669979:-1
position: 669979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:668857-669532:-1:exon

position:669532:-1
position: 669532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CISD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CISD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDGSH iron-sulfur domain-containing protein 3, mitochondrial
translation: MLRVPALVRLGGGRRYRDASWGARVRWLCSPRPPQPVIAAKEPFPVELQAGKNYAWCSCGHSKRQPFCDGAHKREAPGLAPLRFTPARAGPAPLCGCKRTRTPPYCDGTHKGPEVQGATPAPRA
SIO_010081: CISD3
subclass of: SO_0000673
so part of: CISD3
location: complement(join(669353..669532,669979..670173))
location: region:669353-670173:-1
so has part: feature:669979-670173:-1:exon
so has part: feature:669353-669532:-1:exon

XP_032935115.1
type: Protein
SIO_000068: ncbiprotein

position:669353:-1
position: 669353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670173:-1
position: 670173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:669979-670173:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:669353-669532:-1:exon

MLLT6
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: MLLT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(675367..700314)
location: region:675367-700314:-1
so has part: feature:675367-700314:-1:exon
subclass of: SO_0000010

117006639
type: Gene
SIO_000068: ncbigene

position:675367:-1
position: 675367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700314:-1
position: 700314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:675367-700314:-1:exon

MLLT6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: MLLT6
product: MLLT6, PHD finger containing
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033079184.1
SIO_010081: MLLT6
subclass of: SO_0000673
so part of: MLLT6
location: complement(join(675367..675455,676097..676474,678220..678328,678448..678776,679148..679238,679962..680147,680372..680514,681187..681253,684148..684264,685756..685937,686623..687226,688062..688235,688747..688846,690036..690139,690898..690991,691906..692009,693531..693640,694460..694514,695990..696069,700148..700314))
location: region:675367-700314:-1
so has part: feature:700148-700314:-1:exon
so has part: feature:695990-696069:-1:exon
so has part: feature:694460-694514:-1:exon
so has part: feature:693531-693640:-1:exon
so has part: feature:691906-692009:-1:exon
so has part: feature:690898-690991:-1:exon
so has part: feature:690036-690139:-1:exon
so has part: feature:688747-688846:-1:exon
so has part: feature:688062-688235:-1:exon
so has part: feature:686623-687226:-1:exon
so has part: feature:685756-685937:-1:exon
so has part: feature:684148-684264:-1:exon
so has part: feature:681187-681253:-1:exon
so has part: feature:680372-680514:-1:exon
so has part: feature:679962-680147:-1:exon
so has part: feature:679148-679238:-1:exon
so has part: feature:678448-678776:-1:exon
so has part: feature:678220-678328:-1:exon
so has part: feature:676097-676474:-1:exon
so has part: feature:675367-675455:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:700148-700314:-1:exon

position:700148:-1
position: 700148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:695990-696069:-1:exon

position:695990:-1
position: 695990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:696069:-1
position: 696069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:694460-694514:-1:exon

position:694460:-1
position: 694460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694514:-1
position: 694514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:693531-693640:-1:exon

position:693531:-1
position: 693531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693640:-1
position: 693640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:691906-692009:-1:exon

position:691906:-1
position: 691906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:692009:-1
position: 692009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:690898-690991:-1:exon

position:690898:-1
position: 690898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690991:-1
position: 690991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:690036-690139:-1:exon

position:690036:-1
position: 690036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690139:-1
position: 690139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:688747-688846:-1:exon

position:688747:-1
position: 688747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688846:-1
position: 688846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:688062-688235:-1:exon

position:688062:-1
position: 688062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688235:-1
position: 688235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:686623-687226:-1:exon

position:686623:-1
position: 686623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687226:-1
position: 687226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:685756-685937:-1:exon

position:685756:-1
position: 685756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685937:-1
position: 685937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:684148-684264:-1:exon

position:684148:-1
position: 684148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684264:-1
position: 684264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:681187-681253:-1:exon

position:681187:-1
position: 681187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681253:-1
position: 681253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:680372-680514:-1:exon

position:680372:-1
position: 680372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680514:-1
position: 680514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:679962-680147:-1:exon

position:679962:-1
position: 679962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680147:-1
position: 680147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:679148-679238:-1:exon

position:679148:-1
position: 679148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679238:-1
position: 679238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:678448-678776:-1:exon

position:678448:-1
position: 678448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:678776:-1
position: 678776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:678220-678328:-1:exon

position:678220:-1
position: 678220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:678328:-1
position: 678328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:676097-676474:-1:exon

position:676097:-1
position: 676097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:676474:-1
position: 676474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:675367-675455:-1:exon

position:675455:-1
position: 675455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MLLT6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: MLLT6
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein AF-17
translation: MKEMVGGCCVCSDERGWAENPLVYCDGHGCNVAVHQACYGIVQVPTGPWFCRKCESQERAARVRCELCPHKDGALKRTDNGGWAHVVCALYIPEVQFANVLTMEPIVLQYVPHDRFNKTCYICEEQGRESKAASGACMACNRHGCRQAFHVTCAQMAGLLCEEEVLEVDNVKYCGYCKYHFSKMSSRHAGSSSFLPGRRSRSASPAQDKPXAHHERPKKSRKDRERPKQKHKKRPESPSPSSLQQGTTTAEKASGGHHEATKDSSEVARAEAKGRKSSSHGSSHKGKKTGSGKSSGGFGATAPGGTFQSAGSSCALPASQDFTPFPKLEQEEEKFRKATSSSSSSHCSPLYEGPKADVFEQKVIFSGFGSIMRFSTSSVGQQRARDASPVDYKATSTSLAGPTAATAATAATAATTSTSHKRMPSLSTEEGEVLKEKKHKGSKKNKHGPGRPKAGKGKEVLGAQLAASTSTSSSPFSGGSLVSSSVGSSSRSFGHPASLPGLSVESPLLGSGIYTSNKDPIPLGAALRAVCSTPLPSGLLPHQGGAALPQLSRSPFASSIPTCSSSAGSTTQVFSLAGSTFSLPSSHIFGXPLTSGLSLNPLLSQPESSRAEPDLEDCGFGCRGTSPQESLSSMSPISSLPTLFDQTVSCSSSGQLDNVPQATPNIEQLLEKQGNGEAGVNIVEMLKALHSLQKENQRLQEQIMTLTAKKERLQLLNVQLSVPFPXVTSSNGPGSQAQYILPANACTGDSLSISKSPPCKNSFGIENSLSTSSEDPHSGCPSRSSSSLSFHSTPPPLPMLQPSPASLPLPGAQQVNGLARVAGGGLAGGSGVVPMVDNLLGSLAGAQQMPLNGILGSLNGAQPAQPPPQASGPPALQLSTSLSSVASLSPLTEQQRHVLQQHEQQLQQLQQLLTSQPLNPEQQALVFQMMQQIQQKRELQRLQMSGSSQLAMSGLLAATSAPLHSSPSALLTSAAPSSGSLLAPSSGSLLAPSSGSLLASLSPQQLNPGGALLAPQATPPLGSGSAMAQPNPFLSLQPDGGTPKGAPLGDKGTPLAQDKG
SIO_010081: MLLT6
subclass of: SO_0000673
so part of: MLLT6
location: complement(join(675411..675455,676097..676474,678220..678328,678448..678776,679148..679238,679962..680147,680372..680514,681187..681253,684148..684264,685756..685937,686623..687226,688062..688235,688747..688846,690036..690139,690898..690991,691906..692009,693531..693640,694460..694514,695990..696069,700148..700256))
location: region:675411-700256:-1
so has part: feature:700148-700256:-1:exon
so has part: feature:695990-696069:-1:exon
so has part: feature:694460-694514:-1:exon
so has part: feature:693531-693640:-1:exon
so has part: feature:691906-692009:-1:exon
so has part: feature:690898-690991:-1:exon
so has part: feature:690036-690139:-1:exon
so has part: feature:688747-688846:-1:exon
so has part: feature:688062-688235:-1:exon
so has part: feature:686623-687226:-1:exon
so has part: feature:685756-685937:-1:exon
so has part: feature:684148-684264:-1:exon
so has part: feature:681187-681253:-1:exon
so has part: feature:680372-680514:-1:exon
so has part: feature:679962-680147:-1:exon
so has part: feature:679148-679238:-1:exon
so has part: feature:678448-678776:-1:exon
so has part: feature:678220-678328:-1:exon
so has part: feature:676097-676474:-1:exon
so has part: feature:675411-675455:-1:exon

XP_032935075.1
type: Protein
SIO_000068: ncbiprotein

position:675411:-1
position: 675411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700256:-1
position: 700256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:700148-700256:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:695990-696069:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:694460-694514:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:693531-693640:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:691906-692009:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:690898-690991:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:690036-690139:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:688747-688846:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:688062-688235:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:686623-687226:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:685756-685937:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:684148-684264:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:681187-681253:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:680372-680514:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:679962-680147:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:679148-679238:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:678448-678776:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:678220-678328:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:676097-676474:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:675411-675455:-1:exon

LOC117006251
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117006251
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(709188..712237)
location: region:709188-712237:-1
so has part: feature:709188-712237:-1:exon
subclass of: SO_0000010

117006251
type: Gene
SIO_000068: ncbigene

position:709188:-1
position: 709188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712237:-1
position: 712237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:709188-712237:-1:exon

LOC117006251
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117006251
product: elongin BC and polycomb repressive complex 2 associated protein
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 5 bases in 4 codons; deleted 9 bases in 7 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 72% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_033078627.1
SIO_010081: LOC117006251
subclass of: SO_0000673
so part of: LOC117006251
location: complement(join(709188..711575,711929..712237))
location: region:709188-712237:-1
so has part: feature:711929-712237:-1:exon
so has part: feature:709188-711575:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:711929-712237:-1:exon

position:711929:-1
position: 711929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:709188-711575:-1:exon

position:711575:-1
position: 711575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117006251
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117006251
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 5 bases in 4 codons; deleted 9 bases in 7 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: elongin BC and Polycomb repressive complex 2-associated protein
translation: MFLTCEGTLGIVPPTSDYSGQTRPGHFHAGYQQIQGINLGYLQINGTQMFALAQVLSQMFKDIPRTTISKKMETLKIKSRRCDLAELRTLKAIHSVPTRAVKCSLISKADLEALCTSCESLGPRRRKRRRRKSRRREQLLLQGPREFFPLPLPPPCPAEPAVPAEFPAGPWSFPARRGSGQLGVGDLLLFWPVLTGISMVLPGISGVPHGISVVLPGVSAVLPGISAVPPGFSGYLTRDISLVPPVISPVLPLFSPVPPGICPVHPRDLPRGLLLPAAGAGKGRTRSSPKRQGNSAGYSSDSDSSLDLAASSPATSSDSSEREEEEEEEEEGDSSCSSEEGSSSESESSSLCSGESVQSTRYRQAALPRFQPAREPLGEPGEPPXSKALRPDPELLFLSQQLWARTLRATTLESLGSGAQAGLYXKASSSSSSSSSSSSSSSPPPXPSSTAGGAQPQEQRGLGXAGGQDLHKDAWNNNSSTSERPQRSLREVPRRARSLPRSCGGSPGEPRPEHFDRLIRRSKLWCYAKGFNLDGKDLRSSEASPEPWRGAELRFQPRGASEARQERSAKRRRLSRVTEKQRSSSKSTPPKNPRRSCKKGNAPCKTSPARNSFSLMGNFPCTPSLVVGEDGDLCPASSLGGKKSWALAKTHPLWRWHLGGSARPAPPALKPRGPEHR
SIO_010081: LOC117006251
subclass of: SO_0000673
so part of: LOC117006251
location: complement(709249..711286)
location: region:709249-711286:-1
so has part: feature:709249-711286:-1:exon

XP_032934518.1
type: Protein
SIO_000068: ncbiprotein

position:709249:-1
position: 709249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:711286:-1
position: 711286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:709249-711286:-1:exon

SRCIN1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: SRCIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 750883..802713
location: region:750883-802713:1
so has part: feature:750883-802713:1:exon
subclass of: SO_0000010

117006253
type: Gene
SIO_000068: ncbigene

position:750883:1
position: 750883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:802713:1
position: 802713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:750883-802713:1:exon

SRCIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SRCIN1
product: SRC kinase signaling inhibitor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_042779930.1
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: join(750883..751695,757549..757832,771057..771080,778945..779137,781433..781631,782448..782541,783342..784147,784878..784970,785368..785411,785750..785928,787604..787779,788542..788672,789532..789679,790582..790894,792563..792812,792885..793039,793186..793359,794989..795114,796923..797936,799870..800007,802233..802713)
location: region:750883-802713:1
so has part: feature:750883-751695:1:exon
so has part: feature:757549-757832:1:exon
so has part: feature:771057-771080:1:exon
so has part: feature:778945-779137:1:exon
so has part: feature:781433-781631:1:exon
so has part: feature:782448-782541:1:exon
so has part: feature:783342-784147:1:exon
so has part: feature:784878-784970:1:exon
so has part: feature:785368-785411:1:exon
so has part: feature:785750-785928:1:exon
so has part: feature:787604-787779:1:exon
so has part: feature:788542-788672:1:exon
so has part: feature:789532-789679:1:exon
so has part: feature:790582-790894:1:exon
so has part: feature:792563-792812:1:exon
so has part: feature:792885-793039:1:exon
so has part: feature:793186-793359:1:exon
so has part: feature:794989-795114:1:exon
so has part: feature:796923-797936:1:exon
so has part: feature:799870-800007:1:exon
so has part: feature:802233-802713:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:750883-751695:1:exon

position:751695:1
position: 751695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:757549-757832:1:exon

position:757549:1
position: 757549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757832:1
position: 757832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:771057-771080:1:exon

position:771057:1
position: 771057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:771080:1
position: 771080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:778945-779137:1:exon

position:778945:1
position: 778945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:779137:1
position: 779137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:781433-781631:1:exon

position:781433:1
position: 781433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:781631:1
position: 781631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:782448-782541:1:exon

position:782448:1
position: 782448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:782541:1
position: 782541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:783342-784147:1:exon

position:783342:1
position: 783342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:784147:1
position: 784147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:784878-784970:1:exon

position:784878:1
position: 784878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:784970:1
position: 784970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:785368-785411:1:exon

position:785368:1
position: 785368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:785411:1
position: 785411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:785750-785928:1:exon

position:785750:1
position: 785750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:785928:1
position: 785928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:787604-787779:1:exon

position:787604:1
position: 787604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787779:1
position: 787779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:788542-788672:1:exon

position:788542:1
position: 788542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788672:1
position: 788672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:789532-789679:1:exon

position:789532:1
position: 789532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789679:1
position: 789679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:790582-790894:1:exon

position:790582:1
position: 790582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:790894:1
position: 790894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:792563-792812:1:exon

position:792563:1
position: 792563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:792812:1
position: 792812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:792885-793039:1:exon

position:792885:1
position: 792885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793039:1
position: 793039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:793186-793359:1:exon

position:793186:1
position: 793186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793359:1
position: 793359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:794989-795114:1:exon

position:794989:1
position: 794989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:795114:1
position: 795114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:796923-797936:1:exon

position:796923:1
position: 796923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:797936:1
position: 797936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:799870-800007:1:exon

position:799870:1
position: 799870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:800007:1
position: 800007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:802233-802713:1:exon

position:802233:1
position: 802233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SRCIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SRCIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SRC kinase signaling inhibitor 1
translation: MNRQREPRSLNLPLLGEGLARIYRGILAVVGALRPPKEPPAAPAERSAAPSAPPAPLPGRRGSRAAPADPDRTSSHMISADDAEYPREYRTLGNGTRRFSNVGLVHTSERRHTVIAAQSLEALTGLQKTEMERKRDAFMDHLKSKYPQHALALRGQQERLRDQQPNYWSFKARSSRHSQGSQPGLADQAKLSFASAESLETMSEAELPLGFSRMNRFRQSLPLARSASQSKLRSPGVLFLQFGDETRRVHITHEISSLDTLHALIVHMFPQKLTMGMLKSPNTAILIKDEARNVFYELEDVRDIQDRSIIKIYRKEPLYGAFPTSHIGNGELRRDIVYTSRESSPTRRLNNISPASHLASSSPPPALQSSSPSRSRLSYSAARPPSYAGSPVHHERLSSLPPAPGVSPSPSAILERRDVKPDEDLAGKNVVLVKNEGLYADPYGMVHEGRLSITSTQSLAGVGDPFGYSGGLYKRGSVRSLSTYSAAALQTELEDSLYKANAPIYSDTYGPGLGFRMAPSSPQKMVEAGQSPHSPYSGPPSRSSPVRQSFRKDSCSSVFMESPVGKTRNPSASGPPEMFPPPGERPLSGFGSAGPAKDTETRERMEAMEKQIASLTGLVQSALLRGSEAETPSEKTEATNGGTPPSASTSRSGLGTPVPVPPPPSATNTPAGQTTAVSRLQLQLHLHELQQNASELRSQLQQLRKMQLQNQEAVKTLLRRTETELSVRVTDTVRKHEDPLQRQRTLVEEERLRYLNEEELISQQLSDLEKCVEKFQKDVAHGQRLVPVQELEDKAVVLKQLGETLTELKAQFPGLQSKMRVVLRVEVEAVKFLKEEPARLDGLLKRCRSVTDSLAQARRQVDEGVWSSPSSLSQSPKKVAPETDFSKGLELEMPTSPPVSLHHLSGTPEPLGVPGFGHSPPQPQSHPGKSNNPSRAPEMVPAKTQTGPETPSKKSADKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELMKAIPDLEFAAKHKPSPGSSSAASTPEHKPSKAQHAPKSGGKGDPNGRRGSDELTVPRYRTEKPSKSPPPPPPRRSFPSAHGLTTTRSGEVIVTSKKEPGFMKKAESEELEPQKPPVKLRRAVSEVARAVSEVTRPASTPPVIASAVRDEDDEERIMAELEVFQRSSASPSLPTPRCDPLEAVSPGHSGWWPSGAAVLAQGWKPLAAPASRAFSLPQIVLTEWVSEPPSPEAEPELWVAPGSAAAGGQLPPEGTRRGRGAAPGSSPKSPPAPQPPGSASRAFPLAAPPFPRDKTGGQGGDAALDGSGGSDKICPQISVASQPPRSCGEGAGAAEAALPSERAGIIPQIPDTPRGARLAPGRFSGAPKAAWREQSSETPGREPREPPGCPVPHPGTAAGTEPAPRAPGHSLEQIPAWDGGAAGTRGEVTEGICKGHSSPGHVTAPGKKEIYEDTYQRLDSLEETIRELEMTISEISSHPAVEFVLSKDPGSEEIGESLGDLGHGDTALDLSQSKDGAPKSPVPSRTKPALLPKPQLPPRTQQSGGVSIPAMKVVNPASRLKQSQQGSPDKGKHIKQRMEYMRIQGQQQATRAPKEASEASPAVSEKAAAGRTSIPVLTSFGARNSSISF
SIO_010081: SRCIN1
subclass of: SO_0000673
so part of: SRCIN1
location: join(751491..751695,757549..757832,771057..771080,778945..779137,781433..781631,782448..782541,783342..784147,784878..784970,785368..785411,785750..785928,787604..787779,788542..788672,789532..789679,790582..790894,792563..792812,792885..793039,793186..793359,794989..795114,796923..797936,799870..800007,802233..802358)
location: region:751491-802358:1
so has part: feature:751491-751695:1:exon
so has part: feature:757549-757832:1:exon
so has part: feature:771057-771080:1:exon
so has part: feature:778945-779137:1:exon
so has part: feature:781433-781631:1:exon
so has part: feature:782448-782541:1:exon
so has part: feature:783342-784147:1:exon
so has part: feature:784878-784970:1:exon
so has part: feature:785368-785411:1:exon
so has part: feature:785750-785928:1:exon
so has part: feature:787604-787779:1:exon
so has part: feature:788542-788672:1:exon
so has part: feature:789532-789679:1:exon
so has part: feature:790582-790894:1:exon
so has part: feature:792563-792812:1:exon
so has part: feature:792885-793039:1:exon
so has part: feature:793186-793359:1:exon
so has part: feature:794989-795114:1:exon
so has part: feature:796923-797936:1:exon
so has part: feature:799870-800007:1:exon
so has part: feature:802233-802358:1:exon

XP_042635864.1
type: Protein
SIO_000068: ncbiprotein

position:751491:1
position: 751491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:802358:1
position: 802358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751491-751695:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:757549-757832:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:771057-771080:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:778945-779137:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:781433-781631:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:782448-782541:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:783342-784147:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:784878-784970:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:785368-785411:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:785750-785928:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:787604-787779:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:788542-788672:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:789532-789679:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:790582-790894:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:792563-792812:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:792885-793039:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:793186-793359:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:794989-795114:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:796923-797936:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:799870-800007:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:802233-802358:1:exon

ARHGAP23
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: ARHGAP23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(808510..829503)
location: region:808510-829503:-1
so has part: feature:808510-829503:-1:exon
subclass of: SO_0000010

117006423
type: Gene
SIO_000068: ncbigene

position:808510:-1
position: 808510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829503:-1
position: 829503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:808510-829503:-1:exon

ARHGAP23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ARHGAP23
product: Rho GTPase activating protein 23
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_042779927.1
SIO_010081: ARHGAP23
subclass of: SO_0000673
so part of: ARHGAP23
location: complement(join(808510..809879,809982..810000,811170..811282,811390..811431,811520..811645,811738..811827,811908..811981,812206..812284,812924..813079,813160..813278,813408..813535,813755..813816,815704..816003,816084..816221,816311..816368,816452..816563,816666..816821,817651..818587,818748..819065,819725..819779,820000..820078,820305..820397,820890..820914,824704..824883,829140..829503))
location: region:808510-829503:-1
so has part: feature:829140-829503:-1:exon
so has part: feature:824704-824883:-1:exon
so has part: feature:820890-820914:-1:exon
so has part: feature:820305-820397:-1:exon
so has part: feature:820000-820078:-1:exon
so has part: feature:819725-819779:-1:exon
so has part: feature:818748-819065:-1:exon
so has part: feature:817651-818587:-1:exon
so has part: feature:816666-816821:-1:exon
so has part: feature:816452-816563:-1:exon
so has part: feature:816311-816368:-1:exon
so has part: feature:816084-816221:-1:exon
so has part: feature:815704-816003:-1:exon
so has part: feature:813755-813816:-1:exon
so has part: feature:813408-813535:-1:exon
so has part: feature:813160-813278:-1:exon
so has part: feature:812924-813079:-1:exon
so has part: feature:812206-812284:-1:exon
so has part: feature:811908-811981:-1:exon
so has part: feature:811738-811827:-1:exon
so has part: feature:811520-811645:-1:exon
so has part: feature:811390-811431:-1:exon
so has part: feature:811170-811282:-1:exon
so has part: feature:809982-810000:-1:exon
so has part: feature:808510-809879:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:829140-829503:-1:exon

position:829140:-1
position: 829140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:824704-824883:-1:exon

position:824704:-1
position: 824704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:824883:-1
position: 824883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:820890-820914:-1:exon

position:820890:-1
position: 820890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820914:-1
position: 820914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:820305-820397:-1:exon

position:820305:-1
position: 820305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820397:-1
position: 820397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:820000-820078:-1:exon

position:820000:-1
position: 820000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820078:-1
position: 820078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:819725-819779:-1:exon

position:819725:-1
position: 819725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819779:-1
position: 819779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:818748-819065:-1:exon

position:818748:-1
position: 818748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819065:-1
position: 819065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:817651-818587:-1:exon

position:817651:-1
position: 817651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818587:-1
position: 818587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:816666-816821:-1:exon

position:816666:-1
position: 816666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816821:-1
position: 816821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:816452-816563:-1:exon

position:816452:-1
position: 816452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816563:-1
position: 816563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:816311-816368:-1:exon

position:816311:-1
position: 816311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816368:-1
position: 816368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:816084-816221:-1:exon

position:816084:-1
position: 816084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816221:-1
position: 816221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:815704-816003:-1:exon

position:815704:-1
position: 815704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816003:-1
position: 816003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:813755-813816:-1:exon

position:813755:-1
position: 813755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:813816:-1
position: 813816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:813408-813535:-1:exon

position:813408:-1
position: 813408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:813535:-1
position: 813535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:813160-813278:-1:exon

position:813160:-1
position: 813160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:813278:-1
position: 813278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:812924-813079:-1:exon

position:812924:-1
position: 812924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:813079:-1
position: 813079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:812206-812284:-1:exon

position:812206:-1
position: 812206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:812284:-1
position: 812284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:811908-811981:-1:exon

position:811908:-1
position: 811908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:811981:-1
position: 811981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:811738-811827:-1:exon

position:811738:-1
position: 811738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:811827:-1
position: 811827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:811520-811645:-1:exon

position:811520:-1
position: 811520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:811645:-1
position: 811645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:811390-811431:-1:exon

position:811390:-1
position: 811390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:811431:-1
position: 811431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:811170-811282:-1:exon

position:811170:-1
position: 811170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:811282:-1
position: 811282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:809982-810000:-1:exon

position:809982:-1
position: 809982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:810000:-1
position: 810000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:808510-809879:-1:exon

position:809879:-1
position: 809879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGAP23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ARHGAP23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 23
translation: MVEESAGGAARGARRGPCRPPPAPSPKRLWSVERSGRGWRLERPVGVDCSSPEPRCIWLSSLRRHLAAPDPRPPPGPRGLRTERSRRPTPGRRDGASPNANAPPEGGSFPWVGPRTVALRKSPQGGFGFTLRHFIVYPPESTVLPAKEEENGNRAGPTRSRLEPMDTIFVKNVREDGPAHQAGLRTGDRLVKVNGESIIGKTYSQVIALIQNSDDVLELSIMPKDEDILQLAYSQDAYLKGNEPYSGGAQSIPEPPPICYPRKTYPFQSRGAEPTPGQPPDPRAARPATATGPSSPLGARSDTGGSPAHRPEDPQPGGPPPAPRRTPRAPRLLLPPLRVPGRQECQQALSRWFCSQEPRRSASEERRHAMPRYRSVSHDRLGGTAAATPRGWPHSASHDTLLQPSREGWAPRARSDHYLGRYGRSMEALEPSALLSAHLERSPWPPERLCRAAVAVATTGQPIPAGSFAASSSSSSSSSREVQKHPSQPNLQSVDDSGYIGYRSYSPSFQRRTGLLHALACRDPAFGGLPTFSIAQRAVAPLRDSVATTATPPAVTPAVPSAPREPRPEGGRVSEQAEERREEVVLRQKPPTGRKVPAPLRQMNFVFPDGGKDTDMGEPRGDRSGNERPGRRVAPLAAPEDSLASIPFIDEPTSPSIDLKAKHVPASSVVSSAMNSAPAVATSPASPTFAFALSRHYSQDCSSIKAGRRSSYLLAITTERSKSCDDGLNAFRDEGKILRRMPSRVPSLRMLRSFFTDGSLDSLGTSEDARSKRHSTSDLSDVPFSAVRKEGWLHCKQILTKKGKKVGGGIRQWKRVFAVLRSHSLYLCKDRREAVTCAPAPGEEEPPISIQACLVDISYSETKRKHVFRLTTADFCEYLFQAEDREDMLAWIKVIRENSKAEGEDPGFASQALISKKLNDYRKVSPAGSKPDSSPKGPRGLGIRAEFLKQAGTSAPRSPRQDVAVTKDESSSQKTPWGINIMKKNKKSAPRAFGVRLEDCQPAPDNKNVPLIVEACCKVVEDRGLEYMGIYRVPGNNAVVSSLQEQLNKGATEINLQDERWQDLNVISSLLKSFFRKLPEPLFTDDKYNDFIEANRIEDASERMRTLRKLIRDLPGHYYETLKFLVGHLKTIADHSEKNKMEPRNLALVFGPTLVRTSEDNMTDMVTHMPDRYKIVETLIQHSDWFFSDKEDKGEKTPVDEKEAQSVPNIEYLLPNIGRTAAPGDAAGEGQRPCGSAKPKGTWPSRKAPPHRELLAIPFVSAAARKRKKRREAEGVGSSTDDDAERRDSPGRQHEREVTPGKAPRATSTEPAASGVQRECSAGSEPAPDARSIVSGYSTLSTMDRSLCSEVPSVAGSRGDEADDERSELSHMETDTESREGARRGRAGLGTATGDEDKAPASRASFNSHRLIQCDTLARRKLGRPRVAGEVAAVAGGDEQSWVATGRASLREQLRQHLRGSLDDMGTIGVRLRRAHSPETRRKKSSWRRHTVVVPGGLKDLNFNEWKEPRGHPATPGPCRDKDSGLSSLESTKARPAVPVPAQPGSAGPGTATKSPPGSPGPALRFPQCL
SIO_010081: ARHGAP23
subclass of: SO_0000673
so part of: ARHGAP23
location: complement(join(808887..809879,809982..810000,811170..811282,811390..811431,811520..811645,811738..811827,811908..811981,812206..812284,812924..813079,813160..813278,813408..813535,813755..813816,815704..816003,816084..816221,816311..816368,816452..816563,816666..816821,817651..818587,818748..819065,819725..819779,820000..820078,820305..820397,820890..820914,824704..824883,829140..829400))
location: region:808887-829400:-1
so has part: feature:829140-829400:-1:exon
so has part: feature:824704-824883:-1:exon
so has part: feature:820890-820914:-1:exon
so has part: feature:820305-820397:-1:exon
so has part: feature:820000-820078:-1:exon
so has part: feature:819725-819779:-1:exon
so has part: feature:818748-819065:-1:exon
so has part: feature:817651-818587:-1:exon
so has part: feature:816666-816821:-1:exon
so has part: feature:816452-816563:-1:exon
so has part: feature:816311-816368:-1:exon
so has part: feature:816084-816221:-1:exon
so has part: feature:815704-816003:-1:exon
so has part: feature:813755-813816:-1:exon
so has part: feature:813408-813535:-1:exon
so has part: feature:813160-813278:-1:exon
so has part: feature:812924-813079:-1:exon
so has part: feature:812206-812284:-1:exon
so has part: feature:811908-811981:-1:exon
so has part: feature:811738-811827:-1:exon
so has part: feature:811520-811645:-1:exon
so has part: feature:811390-811431:-1:exon
so has part: feature:811170-811282:-1:exon
so has part: feature:809982-810000:-1:exon
so has part: feature:808887-809879:-1:exon

XP_042635861.1
type: Protein
SIO_000068: ncbiprotein

position:808887:-1
position: 808887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829400:-1
position: 829400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:829140-829400:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:824704-824883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:820890-820914:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:820305-820397:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:820000-820078:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:819725-819779:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:818748-819065:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:817651-818587:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:816666-816821:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:816452-816563:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:816311-816368:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:816084-816221:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:815704-816003:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:813755-813816:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:813408-813535:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:813160-813278:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:812924-813079:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:812206-812284:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:811908-811981:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:811738-811827:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:811520-811645:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:811390-811431:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:811170-811282:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:809982-810000:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:808887-809879:-1:exon

LOC117006422
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117006422
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 813907..815697
location: region:813907-815697:1
so has part: feature:813907-815697:1:exon
subclass of: SO_0000010

117006422
type: Gene
SIO_000068: ncbigene

position:813907:1
position: 813907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:815697:1
position: 815697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:813907-815697:1:exon

LOC117006422
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117006422
product: rho family-interacting cell polarization regulator 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033078872.2
SIO_010081: LOC117006422
subclass of: SO_0000673
so part of: LOC117006422
location: join(813907..814278,814379..815697)
location: region:813907-815697:1
so has part: feature:813907-814278:1:exon
so has part: feature:814379-815697:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:813907-814278:1:exon

position:814278:1
position: 814278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:814379-815697:1:exon

position:814379:1
position: 814379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117006422
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117006422
product: rho family-interacting cell polarization regulator 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033078873.1
SIO_010081: LOC117006422
subclass of: SO_0000673
so part of: LOC117006422
location: join(813980..814030,814081..814278,814379..815697)
location: region:813980-815697:1
so has part: feature:813980-814030:1:exon
so has part: feature:814081-814278:1:exon
so has part: feature:814379-815697:1:exon

position:813980:1
position: 813980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:813980-814030:1:exon

position:814030:1
position: 814030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:814081-814278:1:exon

position:814081:1
position: 814081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:814379-815697:1:exon

LOC117006422
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117006422
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117006422 isoform X1
translation: MAHTPALTTAGHRSVPPWHTQLYQPELDTGVSLHGTHTCTDHSWTQECPFTALTPVLTPAKHRCVLPWHCWTWVCPSMGHTPVLTTAGHRSVPPWHTHLPHQALCAPWHGAVPQPEIALSSMRPPGQSLPPARCHQGHQTEPVRHHGQPSASTATKLSDHGQPSDSMATKLSNQGQHGHQTEPWQLTQCQHSHQTEPVQPGPHHGSNRSNHGSATPTMSEPHQQWQSHTRPWLSHTRSWQSQTITWESHTRPWQSHINDGRTTPDRGRATPEHGTATPEHGTATPELSRATPTMAKPHQTLAQPHQIMAESLQTSAKPGHSMAEPQQSLAEPHQIKAEPQQPWQSHTRPWHSHTRPWQSQTRTCQSHTNRDRATPDHGSATPDLGRTTSTMAEPHQIVAQPHQTLAQPHYKMAEPHQTMAEPHQNMARPHQTMAQPHRLLCHHTTETPPRRSGAGSARRAASPAPRVPRSLPRPGATLFLVATSPARAALGVAWGSSTRQRGGESRG
SIO_010081: LOC117006422
subclass of: SO_0000673
so part of: LOC117006422
location: join(814035..814278,814379..815658)
location: region:814035-815658:1
so has part: feature:814035-814278:1:exon
so has part: feature:814379-815658:1:exon

XP_032934763.1
type: Protein
SIO_000068: ncbiprotein

position:814035:1
position: 814035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:815658:1
position: 815658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:814035-814278:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:814379-815658:1:exon

LOC117006422
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117006422
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho family-interacting cell polarization regulator 1-like isoform X2
translation: MGHTPVLTTAGHRSVPPWHTHLPHQALCAPWHGAVPQPEIALSSMRPPGQSLPPARCHQGHQTEPVRHHGQPSASTATKLSDHGQPSDSMATKLSNQGQHGHQTEPWQLTQCQHSHQTEPVQPGPHHGSNRSNHGSATPTMSEPHQQWQSHTRPWLSHTRSWQSQTITWESHTRPWQSHINDGRTTPDRGRATPEHGTATPEHGTATPELSRATPTMAKPHQTLAQPHQIMAESLQTSAKPGHSMAEPQQSLAEPHQIKAEPQQPWQSHTRPWHSHTRPWQSQTRTCQSHTNRDRATPDHGSATPDLGRTTSTMAEPHQIVAQPHQTLAQPHYKMAEPHQTMAEPHQNMARPHQTMAQPHRLLCHHTTETPPRRSGAGSARRAASPAPRVPRSLPRPGATLFLVATSPARAALGVAWGSSTRQRGGESRG
SIO_010081: LOC117006422
subclass of: SO_0000673
so part of: LOC117006422
location: join(814266..814278,814379..815658)
location: region:814266-815658:1
so has part: feature:814266-814278:1:exon
so has part: feature:814379-815658:1:exon

XP_032934764.1
type: Protein
SIO_000068: ncbiprotein

position:814266:1
position: 814266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:814266-814278:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:814379-815658:1:exon

SOCS7
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: SOCS7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(857586..870237)
location: region:857586-870237:-1
so has part: feature:857586-870237:-1:exon
subclass of: SO_0000010

117006254
type: Gene
SIO_000068: ncbigene

position:857586:-1
position: 857586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:870237:-1
position: 870237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:857586-870237:-1:exon

SOCS7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SOCS7
product: suppressor of cytokine signaling 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_042779914.1
SIO_010081: SOCS7
subclass of: SO_0000673
so part of: SOCS7
location: complement(join(857586..857810,859497..859632,861147..861275,862570..862738,863412..863497,863570..863614,864738..864830,865985..866089,866645..866709,869021..869405,869493..870237))
location: region:857586-870237:-1
so has part: feature:869493-870237:-1:exon
so has part: feature:869021-869405:-1:exon
so has part: feature:866645-866709:-1:exon
so has part: feature:865985-866089:-1:exon
so has part: feature:864738-864830:-1:exon
so has part: feature:863570-863614:-1:exon
so has part: feature:863412-863497:-1:exon
so has part: feature:862570-862738:-1:exon
so has part: feature:861147-861275:-1:exon
so has part: feature:859497-859632:-1:exon
so has part: feature:857586-857810:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:869493-870237:-1:exon

position:869493:-1
position: 869493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:869021-869405:-1:exon

position:869021:-1
position: 869021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:869405:-1
position: 869405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:866645-866709:-1:exon

position:866645:-1
position: 866645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:866709:-1
position: 866709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:865985-866089:-1:exon

position:865985:-1
position: 865985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:866089:-1
position: 866089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:864738-864830:-1:exon

position:864738:-1
position: 864738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864830:-1
position: 864830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:863570-863614:-1:exon

position:863570:-1
position: 863570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:863614:-1
position: 863614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:863412-863497:-1:exon

position:863412:-1
position: 863412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:863497:-1
position: 863497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:862570-862738:-1:exon

position:862570:-1
position: 862570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:862738:-1
position: 862738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:861147-861275:-1:exon

position:861147:-1
position: 861147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:861275:-1
position: 861275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:859497-859632:-1:exon

position:859497:-1
position: 859497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859632:-1
position: 859632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:857586-857810:-1:exon

position:857810:-1
position: 857810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SOCS7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SOCS7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of cytokine signaling 7
translation: MPVPPVGAVPPVGAGARSGSRCPVRVPACPHVQPVGGFGAATTGRGGTGTGGARPAAEAAGRGGGVGVGGSPRPCEGGGGGRRSRCGAGPGAGHAAAVAMQRDGDAAAAAAASYRVLSRLLGYGTGPEAGAAGGAGAGTGAAGGMPGTGGRLPGVGPALRSPRPQLMVFRNAAAEGRPGEDCGPVVAAAAAAGGGVPGGGGAELCPRHRCALEPKAAAGWGAAAHNGLELQLAALGLRPPGLGAKGAAACPCLGPPAGEETSDALLVLEALEPDEGGSGSEDEPGSPGRGAARAGGRAAAAPGPAAPPAGPGPGTGPGTGPGPGGRKGSLRIRLSRLFRTKSCSGGSATGDAASAAASAGSLTDVSGARGREQEPGRKHRLTRTQSAFTPVLFSPLFTGETVSLVDVDISQRGLGSPHPPTPPPPPRRSLSLLDDFSSSLPPVLLGGSSLQSFPLPPPPPPHAPDALPRAVPQRPAEALGQQCPPGLQCPLARPDPGSFAASLRELEKCGWYWGPMTWEDAEMKLKGKSDGSFLVRDSSDPRYILSLSFRSQGVTHHTRMEHYRGTFSLWCHPKFEDRCQSVVEFIKRAIMHSKNGKFLYFLRSRVPGLPPTPVQLLYPVSRFSNVKSLQHLCRFRIRQLVRIDHIPELPLPKPLISYIRKFYYYDPQEEQYLSLKEAQLVSRHRHEAQPGTQLGTQPGIQPGIQPGIQLGTQPQAQPQAQAQPST
SIO_010081: SOCS7
subclass of: SO_0000673
so part of: SOCS7
location: complement(join(857588..857810,859497..859632,861147..861275,862570..862738,863412..863497,863570..863614,864738..864830,865985..866089,866645..866709,869021..869405,869493..870237))
location: region:857588-870237:-1
so has part: feature:869493-870237:-1:exon
so has part: feature:869021-869405:-1:exon
so has part: feature:866645-866709:-1:exon
so has part: feature:865985-866089:-1:exon
so has part: feature:864738-864830:-1:exon
so has part: feature:863570-863614:-1:exon
so has part: feature:863412-863497:-1:exon
so has part: feature:862570-862738:-1:exon
so has part: feature:861147-861275:-1:exon
so has part: feature:859497-859632:-1:exon
so has part: feature:857588-857810:-1:exon

XP_042635848.1
type: Protein
SIO_000068: ncbiprotein

position:857588:-1
position: 857588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:869493-870237:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:869021-869405:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:866645-866709:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:865985-866089:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:864738-864830:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:863570-863614:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:863412-863497:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:862570-862738:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:861147-861275:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:859497-859632:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:857588-857810:-1:exon

GPR179
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: GPR179
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 871614..887721
location: region:871614-887721:1
so has part: feature:871614-887721:1:exon
subclass of: SO_0000010

117006255
type: Gene
SIO_000068: ncbigene

position:871614:1
position: 871614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:887721:1
position: 887721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:871614-887721:1:exon

GPR179
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: GPR179
product: G protein-coupled receptor 179, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_042779931.1
SIO_010081: GPR179
subclass of: SO_0000673
so part of: GPR179
location: join(871614..872222,872843..872951,873685..873787,874623..874819,874924..874992,875310..875419,876855..877093,878657..878795,879532..879637,880157..880303,880533..887717)
location: region:871614-887717:1
so has part: feature:871614-872222:1:exon
so has part: feature:872843-872951:1:exon
so has part: feature:873685-873787:1:exon
so has part: feature:874623-874819:1:exon
so has part: feature:874924-874992:1:exon
so has part: feature:875310-875419:1:exon
so has part: feature:876855-877093:1:exon
so has part: feature:878657-878795:1:exon
so has part: feature:879532-879637:1:exon
so has part: feature:880157-880303:1:exon
so has part: feature:880533-887717:1:exon

position:887717:1
position: 887717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:871614-872222:1:exon

position:872222:1
position: 872222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:872843-872951:1:exon

position:872843:1
position: 872843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:872951:1
position: 872951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:873685-873787:1:exon

position:873685:1
position: 873685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873787:1
position: 873787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:874623-874819:1:exon

position:874623:1
position: 874623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874819:1
position: 874819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:874924-874992:1:exon

position:874924:1
position: 874924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874992:1
position: 874992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:875310-875419:1:exon

position:875310:1
position: 875310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875419:1
position: 875419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:876855-877093:1:exon

position:876855:1
position: 876855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877093:1
position: 877093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:878657-878795:1:exon

position:878657:1
position: 878657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:878795:1
position: 878795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:879532-879637:1:exon

position:879532:1
position: 879532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879637:1
position: 879637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:880157-880303:1:exon

position:880157:1
position: 880157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880303:1
position: 880303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:880533-887717:1:exon

position:880533:1
position: 880533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GPR179
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: GPR179
product: G protein-coupled receptor 179, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_042779932.1
SIO_010081: GPR179
subclass of: SO_0000673
so part of: GPR179
location: join(871654..872222,872843..872951,873685..873787,874623..874819,874924..874992,875310..875419,876855..877093,878657..878795,879532..879637,880157..880303,880533..884501,886050..887721)
location: region:871654-887721:1
so has part: feature:871654-872222:1:exon
so has part: feature:872843-872951:1:exon
so has part: feature:873685-873787:1:exon
so has part: feature:874623-874819:1:exon
so has part: feature:874924-874992:1:exon
so has part: feature:875310-875419:1:exon
so has part: feature:876855-877093:1:exon
so has part: feature:878657-878795:1:exon
so has part: feature:879532-879637:1:exon
so has part: feature:880157-880303:1:exon
so has part: feature:880533-884501:1:exon
so has part: feature:886050-887721:1:exon

position:871654:1
position: 871654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:871654-872222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:872843-872951:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:873685-873787:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:874623-874819:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:874924-874992:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:875310-875419:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:876855-877093:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:878657-878795:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:879532-879637:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:880157-880303:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:880533-884501:1:exon

position:884501:1
position: 884501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:886050-887721:1:exon

position:886050:1
position: 886050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GPR179
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: GPR179
product: G protein-coupled receptor 179, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_042779935.1
SIO_010081: GPR179
subclass of: SO_0000673
so part of: GPR179
location: join(871654..872222,872843..872951,873685..873787,874623..874819,874924..874992,875310..875419,876855..877093,878657..878795,879532..879637,880157..880303,880533..884501,886719..887721)
location: region:871654-887721:1
so has part: feature:871654-872222:1:exon
so has part: feature:872843-872951:1:exon
so has part: feature:873685-873787:1:exon
so has part: feature:874623-874819:1:exon
so has part: feature:874924-874992:1:exon
so has part: feature:875310-875419:1:exon
so has part: feature:876855-877093:1:exon
so has part: feature:878657-878795:1:exon
so has part: feature:879532-879637:1:exon
so has part: feature:880157-880303:1:exon
so has part: feature:880533-884501:1:exon
so has part: feature:886719-887721:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:871654-872222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:872843-872951:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:873685-873787:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:874623-874819:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:874924-874992:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:875310-875419:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:876855-877093:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:878657-878795:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:879532-879637:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:880157-880303:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:880533-884501:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:886719-887721:1:exon

position:886719:1
position: 886719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GPR179
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: GPR179
product: G protein-coupled receptor 179, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033078630.2
SIO_010081: GPR179
subclass of: SO_0000673
so part of: GPR179
location: join(871654..872222,872843..872951,873685..873787,874623..874819,874924..874992,875310..875419,876855..877093,878657..878795,879532..879637,880157..880303,880533..883471,884471..887718)
location: region:871654-887718:1
so has part: feature:871654-872222:1:exon
so has part: feature:872843-872951:1:exon
so has part: feature:873685-873787:1:exon
so has part: feature:874623-874819:1:exon
so has part: feature:874924-874992:1:exon
so has part: feature:875310-875419:1:exon
so has part: feature:876855-877093:1:exon
so has part: feature:878657-878795:1:exon
so has part: feature:879532-879637:1:exon
so has part: feature:880157-880303:1:exon
so has part: feature:880533-883471:1:exon
so has part: feature:884471-887718:1:exon

position:887718:1
position: 887718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:871654-872222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:872843-872951:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:873685-873787:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:874623-874819:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:874924-874992:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:875310-875419:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:876855-877093:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:878657-878795:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:879532-879637:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:880157-880303:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:880533-883471:1:exon

position:883471:1
position: 883471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:884471-887718:1:exon

position:884471:1
position: 884471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GPR179
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: GPR179
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 179 isoform X1
translation: MLFQTNDIREASVAEDVEWYQALVRSLAEGHPWVRRAVLALDAHPLAPKPRLMLQATKGDGQILLQDVSNAAPSLGNLSWDNEWFNALKAQRVPALRKRVLSNDLRSLETPKWQRGDSYVGDPGHVRWSPPFLECREGQFLPTWVVTLSSAFYGLKPDLSPEFKGVVRVDVELRDVAIDQCSSGPGWFSDTHRCDLNSTQCVPQESRGFVLGRYLCRCKPGFYGAGGAASSAWAGAAGTDGGSRLRCRPCRPGCATCEDDTPCLIQEDQALRAAVLACQACCMLAIFLSMLVSYHFRRSKRIRTSGIILLETILFGSLLLYFPVFILYFKPSIFRCIVLRWVRMLGFAIVYGTITLKLYRVLKVFLSRSAQRAPYVSSGRVLRMLAPILLLVLWFLAAWTIGMLENSHKNIPLVIRAQTNRGLHFSICGHDCWDYMMVIAEMLFLLWGSFLCYATRAVPSAFHEPRYMGIALHNELMVSAAFHVVRFLIVPSLHPDWTLLLFFAHTHGTITMTLALLFIPKFLHTGSPLREEITAEVYEDELDMRRSGSCMNSSIASAWSEHSLDPDDIREELKKLYRQLEVHKTWRMASNNPHLGKKRSSRRSFGRSILRRSGAELAESASRRSSSAKRLVDSGGNSVRMRDESSRRSSSAKRLVDTAGSSVRMRDGSSRRRSSALRKSRSSEGPPRDAQRTPSPPEGARQAGMDLEQSDSDSLDAAPLLCKSASAQNLAGHWRRAPGRAPPLQKSHSVVAGAREVALLAARREQWHGSRHLSAPAPRVPRDTATPQSPGDKGAQEDVAPLGDAKGHKHVTYGPVKSVSVDSAHPPKRVRVTVKKIPPPPPVRYQSLQRSGTLGEGSEPPPGTPARMGEAEGTAGDKAEGTAGDKAEGTAGDEAESASPPAGKGRMVTPSASSAHVCPWELVQEEILSRKQKAAEAAEGGSAGDTAATSPGPKSPPKKSFRSLGLAIKALNRSRGKGILKGKSEGSLRKRGSSRRDKSGLAETSAVSLGGLSPAPAAKSPERSGQSLPLQHNNNAAIPGEAADWGDSGAGGQWDSLALGTALGDKVTEEPSAARGDAGAAEAPEPPSEGHQGAAGPAEVAEPQEGDEDVAGVTAEEGTLEQLEGTSRSFQEEERPPAKPTPSSVRGEVGPHGIAAARGALLRQEAIAAREDGGIPESPDKALEKGRSQPEPERGPGRSWSGAGSEISAAGTRGDSSSKAGIYPGKGGSEGDSQRSAGMEKPPEVPRVAPQQAEGRRAEVCPWESREQGRSVRAEICPWDTEQDGQGAPKSERGEQPGMGLAGKPPALPKPSSQRAGTTESRKNICPWEVEGEPQPKIEICPWEGAAAPSGKERVRQDTWGTSKGEEKVGSRAPEKGKEPPAKSLPKSPAGKAQSSERAEICPWEAQDSKSSDKAEICPWEAQDSKPSDKAEICPWEAQDSKSSDKAEICPWEAQDSKSSDKAEICPWEAQKSKSSDKAEICPWEVAEPQLEKGTAPGKERMPGKEEIKALEKGSRERESICPWESPDMEQPLDKPKTESSELPKSPSGKSKSSESLKAEICPWESQDLKSSDKAEICPWESQDYKSSDKAEICPWEVAAPQMEKGREPGKGKFPGKEETKALEKGSRERESICPWESPDTEQPLAKAQTGSSELPKESSRKSQSMESLKAEICPWEAESNDKAEICPWEVAEPQMERGTGPGKGKQPGKEETKALEKRSRERESICSWESPDTEQPQAQSRTGSSELPKSPSEKSQSSESLRAEICPWESQDLESIDRAEICPWETQDLKPKDKAEIVSWESQDSKSSDRAEMCLWDVVAHQLEKSATPDLKRPPHKQGSKALQRGSRERESISPWDSPDPEKRPGRAHTGSSELPKSPSAKSQSSESLRAEICPWEGAEAPSQQPKAKQVPAGGSKGDKRITRQAALASPDRSLDSRDRESIGAGDSPDTEQPLGRAHTGSSELPKSPSGKSQSSESLRAEICPWESQDIESIDRAEI…
SIO_010081: GPR179
subclass of: SO_0000673
so part of: GPR179
location: join(871732..872222,872843..872951,873685..873787,874623..874819,874924..874992,875310..875419,876855..877093,878657..878795,879532..879637,880157..880303,880533..887648)
location: region:871732-887648:1
so has part: feature:871732-872222:1:exon
so has part: feature:872843-872951:1:exon
so has part: feature:873685-873787:1:exon
so has part: feature:874623-874819:1:exon
so has part: feature:874924-874992:1:exon
so has part: feature:875310-875419:1:exon
so has part: feature:876855-877093:1:exon
so has part: feature:878657-878795:1:exon
so has part: feature:879532-879637:1:exon
so has part: feature:880157-880303:1:exon
so has part: feature:880533-887648:1:exon

XP_042635865.1
type: Protein
SIO_000068: ncbiprotein

position:871732:1
position: 871732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:887648:1
position: 887648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:871732-872222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:872843-872951:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:873685-873787:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:874623-874819:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:874924-874992:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:875310-875419:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:876855-877093:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:878657-878795:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:879532-879637:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:880157-880303:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:880533-887648:1:exon

GPR179
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: GPR179
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 179 isoform X3
translation: MLFQTNDIREASVAEDVEWYQALVRSLAEGHPWVRRAVLALDAHPLAPKPRLMLQATKGDGQILLQDVSNAAPSLGNLSWDNEWFNALKAQRVPALRKRVLSNDLRSLETPKWQRGDSYVGDPGHVRWSPPFLECREGQFLPTWVVTLSSAFYGLKPDLSPEFKGVVRVDVELRDVAIDQCSSGPGWFSDTHRCDLNSTQCVPQESRGFVLGRYLCRCKPGFYGAGGAASSAWAGAAGTDGGSRLRCRPCRPGCATCEDDTPCLIQEDQALRAAVLACQACCMLAIFLSMLVSYHFRRSKRIRTSGIILLETILFGSLLLYFPVFILYFKPSIFRCIVLRWVRMLGFAIVYGTITLKLYRVLKVFLSRSAQRAPYVSSGRVLRMLAPILLLVLWFLAAWTIGMLENSHKNIPLVIRAQTNRGLHFSICGHDCWDYMMVIAEMLFLLWGSFLCYATRAVPSAFHEPRYMGIALHNELMVSAAFHVVRFLIVPSLHPDWTLLLFFAHTHGTITMTLALLFIPKFLHTGSPLREEITAEVYEDELDMRRSGSCMNSSIASAWSEHSLDPDDIREELKKLYRQLEVHKTWRMASNNPHLGKKRSSRRSFGRSILRRSGAELAESASRRSSSAKRLVDSGGNSVRMRDESSRRSSSAKRLVDTAGSSVRMRDGSSRRRSSALRKSRSSEGPPRDAQRTPSPPEGARQAGMDLEQSDSDSLDAAPLLCKSASAQNLAGHWRRAPGRAPPLQKSHSVVAGAREVALLAARREQWHGSRHLSAPAPRVPRDTATPQSPGDKGAQEDVAPLGDAKGHKHVTYGPVKSVSVDSAHPPKRVRVTVKKIPPPPPVRYQSLQRSGTLGEGSEPPPGTPARMGEAEGTAGDKAEGTAGDKAEGTAGDEAESASPPAGKGRMVTPSASSAHVCPWELVQEEILSRKQKAAEAAEGGSAGDTAATSPGPKSPPKKSFRSLGLAIKALNRSRGKGILKGKSEGSLRKRGSSRRDKSGLAETSAVSLGGLSPAPAAKSPERSGQSLPLQHNNNAAIPGEAADWGDSGAGGQWDSLALGTALGDKVTEEPSAARGDAGAAEAPEPPSEGHQGAAGPAEVAEPQEGDEDVAGVTAEEGTLEQLEGTSRSFQEEERPPAKPTPSSVRGEVGPHGIAAARGALLRQEAIAAREDGGIPESPDKALEKGRSQPEPERGPGRSWSGAGSEISAAGTRGDSSSKAGIYPGKGGSEGDSQRSAGMEKPPEVPRVAPQQAEGRRAEVCPWESREQGRSVRAEICPWDTEQDGQGAPKSERGEQPGMGLAGKPPALPKPSSQRAGTTESRKNICPWEVEGEPQPKIEICPWEGAAAPSGKERVRQDTWGTSKGEEKVGSRAPEKGKEPPAKSLPKSPAGKAQSSERAEICPWEAQDSKSSDKAEICPWEAQDSKPSDKAEICPWEAQDSKSSDKAEICPWEAQDSKSSDKAEICPWEAQKSKSSDKAEICPWEVAEPQLEKGTAPGKERMPGKEEIKALEKGSRERESICPWESPDMEQPLDKPKTESSELPKSPSGKSKSSESLKAEICPWESQDLKSSDKAEICPWESQDYKSSDKAEICPWEVAAPQMEKGREPGKGKFPGKEETKALEKGSRERESICPWESPDTEQPLAKAQTGSSELPKESSRKSQSMESLKAEICPWEAESNDKAEICPWEVAEPQMERGTGPGKGKQPGKEETKALEKRSRERESICSWESPDTEQPQAQSRTGSSELPKSPSEKSQSSESLRAEICPWESQDLESIDRAEICPWETQDLKPKDKAEIVSWESQDSKSSDRAEMCLWDVVAHQLEKSATPDLKRPPHKQGSKALQRGSRERESISPWDSPDPEKRPGRAHTGSSELPKSPSAKSQSSESLRAEICPWESQDLESIDRAEIGTWEVAELQLEKGTAAGKGKQPGKEETKAVGKGSRERESICSWDSPDTEQPLGKSQIGSSELPKSPSGKSQSSESLRAEICPWESQDLES…
SIO_010081: GPR179
subclass of: SO_0000673
so part of: GPR179
location: join(871732..872222,872843..872951,873685..873787,874623..874819,874924..874992,875310..875419,876855..877093,878657..878795,879532..879637,880157..880303,880533..884501,886050..887648)
location: region:871732-887648:1
so has part: feature:871732-872222:1:exon
so has part: feature:872843-872951:1:exon
so has part: feature:873685-873787:1:exon
so has part: feature:874623-874819:1:exon
so has part: feature:874924-874992:1:exon
so has part: feature:875310-875419:1:exon
so has part: feature:876855-877093:1:exon
so has part: feature:878657-878795:1:exon
so has part: feature:879532-879637:1:exon
so has part: feature:880157-880303:1:exon
so has part: feature:880533-884501:1:exon
so has part: feature:886050-887648:1:exon

XP_042635866.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:871732-872222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:872843-872951:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:873685-873787:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:874623-874819:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:874924-874992:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:875310-875419:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:876855-877093:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:878657-878795:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:879532-879637:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:880157-880303:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:880533-884501:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:886050-887648:1:exon

GPR179
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: GPR179
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 179 isoform X5
translation: MLFQTNDIREASVAEDVEWYQALVRSLAEGHPWVRRAVLALDAHPLAPKPRLMLQATKGDGQILLQDVSNAAPSLGNLSWDNEWFNALKAQRVPALRKRVLSNDLRSLETPKWQRGDSYVGDPGHVRWSPPFLECREGQFLPTWVVTLSSAFYGLKPDLSPEFKGVVRVDVELRDVAIDQCSSGPGWFSDTHRCDLNSTQCVPQESRGFVLGRYLCRCKPGFYGAGGAASSAWAGAAGTDGGSRLRCRPCRPGCATCEDDTPCLIQEDQALRAAVLACQACCMLAIFLSMLVSYHFRRSKRIRTSGIILLETILFGSLLLYFPVFILYFKPSIFRCIVLRWVRMLGFAIVYGTITLKLYRVLKVFLSRSAQRAPYVSSGRVLRMLAPILLLVLWFLAAWTIGMLENSHKNIPLVIRAQTNRGLHFSICGHDCWDYMMVIAEMLFLLWGSFLCYATRAVPSAFHEPRYMGIALHNELMVSAAFHVVRFLIVPSLHPDWTLLLFFAHTHGTITMTLALLFIPKFLHTGSPLREEITAEVYEDELDMRRSGSCMNSSIASAWSEHSLDPDDIREELKKLYRQLEVHKTWRMASNNPHLGKKRSSRRSFGRSILRRSGAELAESASRRSSSAKRLVDSGGNSVRMRDESSRRSSSAKRLVDTAGSSVRMRDGSSRRRSSALRKSRSSEGPPRDAQRTPSPPEGARQAGMDLEQSDSDSLDAAPLLCKSASAQNLAGHWRRAPGRAPPLQKSHSVVAGAREVALLAARREQWHGSRHLSAPAPRVPRDTATPQSPGDKGAQEDVAPLGDAKGHKHVTYGPVKSVSVDSAHPPKRVRVTVKKIPPPPPVRYQSLQRSGTLGEGSEPPPGTPARMGEAEGTAGDKAEGTAGDKAEGTAGDEAESASPPAGKGRMVTPSASSAHVCPWELVQEEILSRKQKAAEAAEGGSAGDTAATSPGPKSPPKKSFRSLGLAIKALNRSRGKGILKGKSEGSLRKRGSSRRDKSGLAETSAVSLGGLSPAPAAKSPERSGQSLPLQHNNNAAIPGEAADWGDSGAGGQWDSLALGTALGDKVTEEPSAARGDAGAAEAPEPPSEGHQGAAGPAEVAEPQEGDEDVAGVTAEEGTLEQLEGTSRSFQEEERPPAKPTPSSVRGEVGPHGIAAARGALLRQEAIAAREDGGIPESPDKALEKGRSQPEPERGPGRSWSGAGSEISAAGTRGDSSSKAGIYPGKGGSEGDSQRSAGMEKPPEVPRVAPQQAEGRRAEVCPWESREQGRSVRAEICPWDTEQDGQGAPKSERGEQPGMGLAGKPPALPKPSSQRAGTTESRKNICPWEVEGEPQPKIEICPWEGAAAPSGKERVRQDTWGTSKGEEKVGSRAPEKGKEPPAKSLPKSPAGKAQSSERAEICPWEAQDSKSSDKAEICPWEAQDSKPSDKAEICPWEAQDSKSSDKAEICPWEAQDSKSSDKAEICPWEAQKSKSSDKAEICPWEVAEPQLEKGTAPGKERMPGKEEIKALEKGSRERESICPWESPDMEQPLDKPKTESSELPKSPSGKSKSSESLKAEICPWESQDLKSSDKAEICPWESQDYKSSDKAEICPWEVAAPQMEKGREPGKGKFPGKEETKALEKGSRERESICPWESPDTEQPLAKAQTGSSELPKESSRKSQSMESLKAEICPWEAESNDKAEICPWEVAEPQMERGTGPGKGKQPGKEETKALEKRSRERESICSWESPDTEQPQAQSRTGSSELPKSPSEKSQSSESLRAEICPWESQDLESIDRAEICPWETQDLKPKDKAEIVSWESQDSKSSDRAEMCLWDVVAHQLEKSATPDLKRPPHKQGSKALQRGSRERESISPWDSPDPEKRPGRAHTGSSELPKSPSAKSQSSESLRAEICPWESQDLESIDRAEICPWEGAAPQMETGTATPKERLPGKEASRALEKTSRERESICPWETPDTEQPLDKTKTGSSELPKSPSGKSQSSEKAEICPWEVESSDKSE…
SIO_010081: GPR179
subclass of: SO_0000673
so part of: GPR179
location: join(871732..872222,872843..872951,873685..873787,874623..874819,874924..874992,875310..875419,876855..877093,878657..878795,879532..879637,880157..880303,880533..884501,886719..887648)
location: region:871732-887648:1
so has part: feature:871732-872222:1:exon
so has part: feature:872843-872951:1:exon
so has part: feature:873685-873787:1:exon
so has part: feature:874623-874819:1:exon
so has part: feature:874924-874992:1:exon
so has part: feature:875310-875419:1:exon
so has part: feature:876855-877093:1:exon
so has part: feature:878657-878795:1:exon
so has part: feature:879532-879637:1:exon
so has part: feature:880157-880303:1:exon
so has part: feature:880533-884501:1:exon
so has part: feature:886719-887648:1:exon

XP_042635869.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:871732-872222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:872843-872951:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:873685-873787:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:874623-874819:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:874924-874992:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:875310-875419:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:876855-877093:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:878657-878795:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:879532-879637:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:880157-880303:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:880533-884501:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:886719-887648:1:exon

GPR179
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: GPR179
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 179 isoform X2
translation: MLFQTNDIREASVAEDVEWYQALVRSLAEGHPWVRRAVLALDAHPLAPKPRLMLQATKGDGQILLQDVSNAAPSLGNLSWDNEWFNALKAQRVPALRKRVLSNDLRSLETPKWQRGDSYVGDPGHVRWSPPFLECREGQFLPTWVVTLSSAFYGLKPDLSPEFKGVVRVDVELRDVAIDQCSSGPGWFSDTHRCDLNSTQCVPQESRGFVLGRYLCRCKPGFYGAGGAASSAWAGAAGTDGGSRLRCRPCRPGCATCEDDTPCLIQEDQALRAAVLACQACCMLAIFLSMLVSYHFRRSKRIRTSGIILLETILFGSLLLYFPVFILYFKPSIFRCIVLRWVRMLGFAIVYGTITLKLYRVLKVFLSRSAQRAPYVSSGRVLRMLAPILLLVLWFLAAWTIGMLENSHKNIPLVIRAQTNRGLHFSICGHDCWDYMMVIAEMLFLLWGSFLCYATRAVPSAFHEPRYMGIALHNELMVSAAFHVVRFLIVPSLHPDWTLLLFFAHTHGTITMTLALLFIPKFLHTGSPLREEITAEVYEDELDMRRSGSCMNSSIASAWSEHSLDPDDIREELKKLYRQLEVHKTWRMASNNPHLGKKRSSRRSFGRSILRRSGAELAESASRRSSSAKRLVDSGGNSVRMRDESSRRSSSAKRLVDTAGSSVRMRDGSSRRRSSALRKSRSSEGPPRDAQRTPSPPEGARQAGMDLEQSDSDSLDAAPLLCKSASAQNLAGHWRRAPGRAPPLQKSHSVVAGAREVALLAARREQWHGSRHLSAPAPRVPRDTATPQSPGDKGAQEDVAPLGDAKGHKHVTYGPVKSVSVDSAHPPKRVRVTVKKIPPPPPVRYQSLQRSGTLGEGSEPPPGTPARMGEAEGTAGDKAEGTAGDKAEGTAGDEAESASPPAGKGRMVTPSASSAHVCPWELVQEEILSRKQKAAEAAEGGSAGDTAATSPGPKSPPKKSFRSLGLAIKALNRSRGKGILKGKSEGSLRKRGSSRRDKSGLAETSAVSLGGLSPAPAAKSPERSGQSLPLQHNNNAAIPGEAADWGDSGAGGQWDSLALGTALGDKVTEEPSAARGDAGAAEAPEPPSEGHQGAAGPAEVAEPQEGDEDVAGVTAEEGTLEQLEGTSRSFQEEERPPAKPTPSSVRGEVGPHGIAAARGALLRQEAIAAREDGGIPESPDKALEKGRSQPEPERGPGRSWSGAGSEISAAGTRGDSSSKAGIYPGKGGSEGDSQRSAGMEKPPEVPRVAPQQAEGRRAEVCPWESREQGRSVRAEICPWDTEQDGQGAPKSERGEQPGMGLAGKPPALPKPSSQRAGTTESRKNICPWEVEGEPQPKIEICPWEGAAAPSGKERVRQDTWGTSKGEEKVGSRAPEKGKEPPAKSLPKSPAGKAQSSERAEICPWEAQDSKSSDKAEICPWEAQDSKPSDKAEICPWEAQDSKSSDKAEICPWEAQDSKSSDKAEICPWEAQKSKSSDKAEICPWEVAEPQLEKGTAPGKERMPGKEEIKALEKGSRERESICPWESPDMEQPLDKPKTESSELPKSPSGKSQSSESLRAEICPWEGAEAPSQQPKAKQVPAGGSKGDKRITRQAALASPDRSLDSRDRESIGAGDSPDTEQPLGRAHTGSSELPKSPSGKSQSSESLRAEICPWESQDIESIDRAEIGTWEVAELQMEKGTAAGKGKQPGKEETKALEKRSRERESICSWESPDTEQPLEKTRTGSSELPKSPSEKSQSSESLRAEICPWESQDLESIDRAEIGTWETQDLKPKDKAETVPWESQDSKSSDRAEMCIWDVVAHQLEKSATPDLKRPPHKQGSKALQRGSRERESISPWDSPDPEKRPGRAHTGSSELPKSPSAKSQSMESLRAEICPWEGAEAPSQQPKAQQVPAGGSKGDKRITRQAALASPDRSLDSRDRESSGAGDSPDTEQPLGRAHTGSSELPKSPSGKSQSSESLRAEICPWESQDLESIDRAEIGTWEVAELQMDKGTGAGNG…
SIO_010081: GPR179
subclass of: SO_0000673
so part of: GPR179
location: join(871732..872222,872843..872951,873685..873787,874623..874819,874924..874992,875310..875419,876855..877093,878657..878795,879532..879637,880157..880303,880533..883471,884471..887648)
location: region:871732-887648:1
so has part: feature:871732-872222:1:exon
so has part: feature:872843-872951:1:exon
so has part: feature:873685-873787:1:exon
so has part: feature:874623-874819:1:exon
so has part: feature:874924-874992:1:exon
so has part: feature:875310-875419:1:exon
so has part: feature:876855-877093:1:exon
so has part: feature:878657-878795:1:exon
so has part: feature:879532-879637:1:exon
so has part: feature:880157-880303:1:exon
so has part: feature:880533-883471:1:exon
so has part: feature:884471-887648:1:exon

XP_032934521.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:871732-872222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:872843-872951:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:873685-873787:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:874623-874819:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:874924-874992:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:875310-875419:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:876855-877093:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:878657-878795:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:879532-879637:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:880157-880303:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:880533-883471:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:884471-887648:1:exon

GPR179
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: GPR179
product: G protein-coupled receptor 179, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_042779933.1
SIO_010081: GPR179
subclass of: SO_0000673
so part of: GPR179
location: join(880258..880348,880533..887714)
location: region:880258-887714:1
so has part: feature:880258-880348:1:exon
so has part: feature:880533-887714:1:exon

position:880258:1
position: 880258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:887714:1
position: 887714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880258-880348:1:exon

position:880348:1
position: 880348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:880533-887714:1:exon

GPR179
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: GPR179
product: G protein-coupled receptor 179, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_042779934.1
SIO_010081: GPR179
subclass of: SO_0000673
so part of: GPR179
location: join(880264..880355,880533..887714)
location: region:880264-887714:1
so has part: feature:880264-880355:1:exon
so has part: feature:880533-887714:1:exon

position:880264:1
position: 880264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880264-880355:1:exon

position:880355:1
position: 880355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:880533-887714:1:exon

GPR179
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: GPR179
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 179 isoform X4
translation: MASNNPHLGKKRSSRRSFGRSILRRSGAELAESASRRSSSAKRLVDSGGNSVRMRDESSRRSSSAKRLVDTAGSSVRMRDGSSRRRSSALRKSRSSEGPPRDAQRTPSPPEGARQAGMDLEQSDSDSLDAAPLLCKSASAQNLAGHWRRAPGRAPPLQKSHSVVAGAREVALLAARREQWHGSRHLSAPAPRVPRDTATPQSPGDKGAQEDVAPLGDAKGHKHVTYGPVKSVSVDSAHPPKRVRVTVKKIPPPPPVRYQSLQRSGTLGEGSEPPPGTPARMGEAEGTAGDKAEGTAGDKAEGTAGDEAESASPPAGKGRMVTPSASSAHVCPWELVQEEILSRKQKAAEAAEGGSAGDTAATSPGPKSPPKKSFRSLGLAIKALNRSRGKGILKGKSEGSLRKRGSSRRDKSGLAETSAVSLGGLSPAPAAKSPERSGQSLPLQHNNNAAIPGEAADWGDSGAGGQWDSLALGTALGDKVTEEPSAARGDAGAAEAPEPPSEGHQGAAGPAEVAEPQEGDEDVAGVTAEEGTLEQLEGTSRSFQEEERPPAKPTPSSVRGEVGPHGIAAARGALLRQEAIAAREDGGIPESPDKALEKGRSQPEPERGPGRSWSGAGSEISAAGTRGDSSSKAGIYPGKGGSEGDSQRSAGMEKPPEVPRVAPQQAEGRRAEVCPWESREQGRSVRAEICPWDTEQDGQGAPKSERGEQPGMGLAGKPPALPKPSSQRAGTTESRKNICPWEVEGEPQPKIEICPWEGAAAPSGKERVRQDTWGTSKGEEKVGSRAPEKGKEPPAKSLPKSPAGKAQSSERAEICPWEAQDSKSSDKAEICPWEAQDSKPSDKAEICPWEAQDSKSSDKAEICPWEAQDSKSSDKAEICPWEAQKSKSSDKAEICPWEVAEPQLEKGTAPGKERMPGKEEIKALEKGSRERESICPWESPDMEQPLDKPKTESSELPKSPSGKSKSSESLKAEICPWESQDLKSSDKAEICPWESQDYKSSDKAEICPWEVAAPQMEKGREPGKGKFPGKEETKALEKGSRERESICPWESPDTEQPLAKAQTGSSELPKESSRKSQSMESLKAEICPWEAESNDKAEICPWEVAEPQMERGTGPGKGKQPGKEETKALEKRSRERESICSWESPDTEQPQAQSRTGSSELPKSPSEKSQSSESLRAEICPWESQDLESIDRAEICPWETQDLKPKDKAEIVSWESQDSKSSDRAEMCLWDVVAHQLEKSATPDLKRPPHKQGSKALQRGSRERESISPWDSPDPEKRPGRAHTGSSELPKSPSAKSQSSESLRAEICPWEGAEAPSQQPKAKQVPAGGSKGDKRITRQAALASPDRSLDSRDRESIGAGDSPDTEQPLGRAHTGSSELPKSPSGKSQSSESLRAEICPWESQDIESIDRAEIGTWEVAELQMEKGTAAGKGKQPGKEETKALEKRSRERESICSWESPDTEQPLEKTRTGSSELPKSPSEKSQSSESLRAEICPWESQDLESIDRAEIGTWETQDLKPKDKAETVPWESQDSKSSDRAEMCIWDVVAHQLEKSATPDLKRPPHKQGSKALQRGSRERESISPWDSPDPEKRPGRAHTGSSELPKSPSAKSQSMESLRAEICPWEGAEAPSQQPKAQQVPAGGSKGDKRITRQAALASPDRSLDSRDRESSGAGDSPDTEQPLGRAHTGSSELPKSPSGKSQSSESLRAEICPWESQDLESIDRAEIGTWEVAELQMDKGTGAGNGKQPGKEETKAVGKGSRERESICSWESPDMEQPLDKSQTGSSELPKSPSGKSQSSESLRAEICPWESQDLESIDRAEICPWESQDLESIDRAEIGTWEVAELQLEKGTAAGKGKQPGKEETKAVGKGSRERESICSWDSPDTEQPLGKSQIGSSELPKSPSGKSQSSESLRAEICPWESQDLESIDRAEIGTWETQDLKPKDKAEIVSRESQDSNSSGRAEMCIWDVVAHQLEKSATPDLKRPPHKGSKALQRGS…
SIO_010081: GPR179
subclass of: SO_0000673
so part of: GPR179
location: 880584..887648
location: region:880584-887648:1
so has part: feature:880584-887648:1:exon

XP_042635867.1
type: Protein
SIO_000068: ncbiprotein

position:880584:1
position: 880584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880584-887648:1:exon

GPR179
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: GPR179
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 179 isoform X4
translation: MASNNPHLGKKRSSRRSFGRSILRRSGAELAESASRRSSSAKRLVDSGGNSVRMRDESSRRSSSAKRLVDTAGSSVRMRDGSSRRRSSALRKSRSSEGPPRDAQRTPSPPEGARQAGMDLEQSDSDSLDAAPLLCKSASAQNLAGHWRRAPGRAPPLQKSHSVVAGAREVALLAARREQWHGSRHLSAPAPRVPRDTATPQSPGDKGAQEDVAPLGDAKGHKHVTYGPVKSVSVDSAHPPKRVRVTVKKIPPPPPVRYQSLQRSGTLGEGSEPPPGTPARMGEAEGTAGDKAEGTAGDKAEGTAGDEAESASPPAGKGRMVTPSASSAHVCPWELVQEEILSRKQKAAEAAEGGSAGDTAATSPGPKSPPKKSFRSLGLAIKALNRSRGKGILKGKSEGSLRKRGSSRRDKSGLAETSAVSLGGLSPAPAAKSPERSGQSLPLQHNNNAAIPGEAADWGDSGAGGQWDSLALGTALGDKVTEEPSAARGDAGAAEAPEPPSEGHQGAAGPAEVAEPQEGDEDVAGVTAEEGTLEQLEGTSRSFQEEERPPAKPTPSSVRGEVGPHGIAAARGALLRQEAIAAREDGGIPESPDKALEKGRSQPEPERGPGRSWSGAGSEISAAGTRGDSSSKAGIYPGKGGSEGDSQRSAGMEKPPEVPRVAPQQAEGRRAEVCPWESREQGRSVRAEICPWDTEQDGQGAPKSERGEQPGMGLAGKPPALPKPSSQRAGTTESRKNICPWEVEGEPQPKIEICPWEGAAAPSGKERVRQDTWGTSKGEEKVGSRAPEKGKEPPAKSLPKSPAGKAQSSERAEICPWEAQDSKSSDKAEICPWEAQDSKPSDKAEICPWEAQDSKSSDKAEICPWEAQDSKSSDKAEICPWEAQKSKSSDKAEICPWEVAEPQLEKGTAPGKERMPGKEEIKALEKGSRERESICPWESPDMEQPLDKPKTESSELPKSPSGKSKSSESLKAEICPWESQDLKSSDKAEICPWESQDYKSSDKAEICPWEVAAPQMEKGREPGKGKFPGKEETKALEKGSRERESICPWESPDTEQPLAKAQTGSSELPKESSRKSQSMESLKAEICPWEAESNDKAEICPWEVAEPQMERGTGPGKGKQPGKEETKALEKRSRERESICSWESPDTEQPQAQSRTGSSELPKSPSEKSQSSESLRAEICPWESQDLESIDRAEICPWETQDLKPKDKAEIVSWESQDSKSSDRAEMCLWDVVAHQLEKSATPDLKRPPHKQGSKALQRGSRERESISPWDSPDPEKRPGRAHTGSSELPKSPSAKSQSSESLRAEICPWEGAEAPSQQPKAKQVPAGGSKGDKRITRQAALASPDRSLDSRDRESIGAGDSPDTEQPLGRAHTGSSELPKSPSGKSQSSESLRAEICPWESQDIESIDRAEIGTWEVAELQMEKGTAAGKGKQPGKEETKALEKRSRERESICSWESPDTEQPLEKTRTGSSELPKSPSEKSQSSESLRAEICPWESQDLESIDRAEIGTWETQDLKPKDKAETVPWESQDSKSSDRAEMCIWDVVAHQLEKSATPDLKRPPHKQGSKALQRGSRERESISPWDSPDPEKRPGRAHTGSSELPKSPSAKSQSMESLRAEICPWEGAEAPSQQPKAQQVPAGGSKGDKRITRQAALASPDRSLDSRDRESSGAGDSPDTEQPLGRAHTGSSELPKSPSGKSQSSESLRAEICPWESQDLESIDRAEIGTWEVAELQMDKGTGAGNGKQPGKEETKAVGKGSRERESICSWESPDMEQPLDKSQTGSSELPKSPSGKSQSSESLRAEICPWESQDLESIDRAEICPWESQDLESIDRAEIGTWEVAELQLEKGTAAGKGKQPGKEETKAVGKGSRERESICSWDSPDTEQPLGKSQIGSSELPKSPSGKSQSSESLRAEICPWESQDLESIDRAEIGTWETQDLKPKDKAEIVSRESQDSNSSGRAEMCIWDVVAHQLEKSATPDLKRPPHKGSKALQRGS…
SIO_010081: GPR179
subclass of: SO_0000673
so part of: GPR179
location: 880584..887648
location: region:880584-887648:1
so has part: feature:880584-887648:1:exon

XP_042635868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:880584-887648:1:exon

MRPL45
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: MRPL45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(889688..896574)
location: region:889688-896574:-1
so has part: feature:889688-896574:-1:exon
subclass of: SO_0000010

117006599
type: Gene
SIO_000068: ncbigene

position:889688:-1
position: 889688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896574:-1
position: 896574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:889688-896574:-1:exon

MRPL45
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: MRPL45
product: mitochondrial ribosomal protein L45
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033079129.1
SIO_010081: MRPL45
subclass of: SO_0000673
so part of: MRPL45
location: complement(join(889688..889999,890878..891051,892806..892955,893255..893303,894210..894308,895571..895688,896159..896354,896483..896574))
location: region:889688-896574:-1
so has part: feature:896483-896574:-1:exon
so has part: feature:896159-896354:-1:exon
so has part: feature:895571-895688:-1:exon
so has part: feature:894210-894308:-1:exon
so has part: feature:893255-893303:-1:exon
so has part: feature:892806-892955:-1:exon
so has part: feature:890878-891051:-1:exon
so has part: feature:889688-889999:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:896483-896574:-1:exon

position:896483:-1
position: 896483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:896159-896354:-1:exon

position:896159:-1
position: 896159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896354:-1
position: 896354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:895571-895688:-1:exon

position:895571:-1
position: 895571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:895688:-1
position: 895688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:894210-894308:-1:exon

position:894210:-1
position: 894210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:894308:-1
position: 894308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:893255-893303:-1:exon

position:893255:-1
position: 893255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893303:-1
position: 893303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:892806-892955:-1:exon

position:892806:-1
position: 892806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892955:-1
position: 892955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:890878-891051:-1:exon

position:890878:-1
position: 890878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:891051:-1
position: 891051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:889688-889999:-1:exon

position:889999:-1
position: 889999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MRPL45
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: MRPL45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L45, mitochondrial
translation: MAAAMAAGLGRRAPRLCWKAAESLLRPGAALPGVVVPVRGRRKRPPVPEWARELSPEERERRLKSAAPIFPDERIERTFFLACTAEIIDPYVPPEGDARMTSLSKDGVKQQVQKLRQTAASQLALRKIKDHIPDFSTKTFPEKAQEIFIEAHNSLANFNKQKLHSLVTERCYPDMVRGNRYKTIRWRFVESLEPPRVVHVRCESIMNRGNLYGQVTVRMHSRQILAIYDRFGRLMYGGEEIPKDVLEYVVFERYLVNPYGTWRMHGKIVPDWAPPKDPIIKTVMIPGPAPDPSEQREKVK
SIO_010081: MRPL45
subclass of: SO_0000673
so part of: MRPL45
location: complement(join(889940..889999,890878..891051,892806..892955,893255..893303,894210..894308,895571..895688,896159..896354,896483..896539))
location: region:889940-896539:-1
so has part: feature:896483-896539:-1:exon
so has part: feature:896159-896354:-1:exon
so has part: feature:895571-895688:-1:exon
so has part: feature:894210-894308:-1:exon
so has part: feature:893255-893303:-1:exon
so has part: feature:892806-892955:-1:exon
so has part: feature:890878-891051:-1:exon
so has part: feature:889940-889999:-1:exon

XP_032935020.1
type: Protein
SIO_000068: ncbiprotein

position:889940:-1
position: 889940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896539:-1
position: 896539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:896483-896539:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:896159-896354:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:895571-895688:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:894210-894308:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:893255-893303:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:892806-892955:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:890878-891051:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:889940-889999:-1:exon

NPEPPS
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: NPEPPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 901733..938066
location: region:901733-938066:1
so has part: feature:901733-938066:1:exon
subclass of: SO_0000010

117006598
type: Gene
SIO_000068: ncbigene

position:901733:1
position: 901733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:938066:1
position: 938066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:901733-938066:1:exon

NPEPPS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NPEPPS
product: aminopeptidase puromycin sensitive
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 13 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_033079128.1
SIO_010081: NPEPPS
subclass of: SO_0000673
so part of: NPEPPS
location: join(901733..901979,911616..911700,914841..914918,916228..916349,917158..917265,918076..918276,920830..920926,921043..921076,922189..922303,924058..924222,925495..925599,925865..925925,926520..926629,926953..927016,928689..928828,929156..929290,930054..930273,931888..932030,933064..933120,934246..934353,935198..935353,935457..935504,937743..938066)
location: region:901733-938066:1
so has part: feature:901733-901979:1:exon
so has part: feature:911616-911700:1:exon
so has part: feature:914841-914918:1:exon
so has part: feature:916228-916349:1:exon
so has part: feature:917158-917265:1:exon
so has part: feature:918076-918276:1:exon
so has part: feature:920830-920926:1:exon
so has part: feature:921043-921076:1:exon
so has part: feature:922189-922303:1:exon
so has part: feature:924058-924222:1:exon
so has part: feature:925495-925599:1:exon
so has part: feature:925865-925925:1:exon
so has part: feature:926520-926629:1:exon
so has part: feature:926953-927016:1:exon
so has part: feature:928689-928828:1:exon
so has part: feature:929156-929290:1:exon
so has part: feature:930054-930273:1:exon
so has part: feature:931888-932030:1:exon
so has part: feature:933064-933120:1:exon
so has part: feature:934246-934353:1:exon
so has part: feature:935198-935353:1:exon
so has part: feature:935457-935504:1:exon
so has part: feature:937743-938066:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:901733-901979:1:exon

position:901979:1
position: 901979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:911616-911700:1:exon

position:911616:1
position: 911616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:911700:1
position: 911700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:914841-914918:1:exon

position:914841:1
position: 914841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:914918:1
position: 914918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:916228-916349:1:exon

position:916228:1
position: 916228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:916349:1
position: 916349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:917158-917265:1:exon

position:917158:1
position: 917158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:917265:1
position: 917265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:918076-918276:1:exon

position:918076:1
position: 918076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:918276:1
position: 918276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:920830-920926:1:exon

position:920830:1
position: 920830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:920926:1
position: 920926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:921043-921076:1:exon

position:921043:1
position: 921043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:921076:1
position: 921076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:922189-922303:1:exon

position:922189:1
position: 922189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:922303:1
position: 922303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:924058-924222:1:exon

position:924058:1
position: 924058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924222:1
position: 924222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:925495-925599:1:exon

position:925495:1
position: 925495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:925599:1
position: 925599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:925865-925925:1:exon

position:925865:1
position: 925865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:925925:1
position: 925925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:926520-926629:1:exon

position:926520:1
position: 926520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:926629:1
position: 926629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:926953-927016:1:exon

position:926953:1
position: 926953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:927016:1
position: 927016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:928689-928828:1:exon

position:928689:1
position: 928689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:928828:1
position: 928828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:929156-929290:1:exon

position:929156:1
position: 929156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929290:1
position: 929290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:930054-930273:1:exon

position:930054:1
position: 930054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:930273:1
position: 930273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:931888-932030:1:exon

position:931888:1
position: 931888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:932030:1
position: 932030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:933064-933120:1:exon

position:933064:1
position: 933064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:933120:1
position: 933120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:934246-934353:1:exon

position:934246:1
position: 934246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:934353:1
position: 934353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:935198-935353:1:exon

position:935198:1
position: 935198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:935353:1
position: 935353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:935457-935504:1:exon

position:935457:1
position: 935457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:935504:1
position: 935504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:937743-938066:1:exon

position:937743:1
position: 937743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NPEPPS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: NPEPPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: puromycin-sensitive aminopeptidase
translation: MPEKRPFERLPADVSPLNYGLCLKPDLIDFTFEGKLEAAVQVKNATNQIVMNCADIDIITASYAPEGDEEVHATGFNYQNEDEKVTLSFPSTLQKGTGTLKIDFVGELNDKMKGFYRSKYSTASGDTRYAAVTQFEATDARRAFPCWDEPAIKATFDISLVVPKDRVALSNMNVLERRPYPDDESLVEVKFARSPVMSTYLVAFVVGEYDFVEARSTDGVLVRVYTPVGKAEQGKFALEVAAKTLPFYKDYFNVPYPLPKIDLIAIADFAAGAMENWGLVTYRETALLIDPKNSCSSSRQWVALVVGHELAHQWFGNLVTMEWWTHLWLNEGFASWIEYLCVDHCFPEYDIWTQFVSADYTRAQELDALDNSHPIEVSVGHPSEVDEIFDAISYSKGASVIRMLHNYIGDEDFRKGMNLYLTKFQQRNAATEDLWDSLEKASGKPIAAVMNTWTKQMGFPLIYVEAEQQEDDRVLKLVQKKFCASGPYTGEDFPMWMVPISICTSEDPSCAKMQILMDKPELTVVLKDTKPEHWVKLNLGTVGFYRTQYSPAMLESLIPAIRDLSLPPVDRLGLQNDLFSLARAGIISTVEVLKVMEAFVNEPNYTVWSDLSCNLGILGTLLSHTDFYEDIQAFVRDVFSPIGERLGWDPKPGEGHLDALLRGLVLGKLGKAGHKATLEEARRRFREHVEGKQLLSADLRSPVYVTVLKHGDSSTLDTMLKLHKQADMQEEKNRIERVLGAISQPELIQKVLTFALSEEVRPQDTVSVIGGVAGGSKQGRKAAWKFLRDNWEELYNRYQGGFLISRLIKLTVDGFANDKMAAEVKAFFESHPAPSAERTVQQCCENIALNAAWLRRDSEQLQRFLQQRRGPE
SIO_010081: NPEPPS
subclass of: SO_0000673
so part of: NPEPPS
location: join(901857..901979,911616..911700,914841..914918,916228..916349,917158..917265,918076..918276,920830..920926,921043..921076,922189..922303,924058..924222,925495..925599,925865..925925,926520..926629,926953..927016,928689..928828,929156..929290,930054..930273,931888..932030,933064..933120,934246..934353,935198..935353,935457..935504,937743..937886)
location: region:901857-937886:1
so has part: feature:901857-901979:1:exon
so has part: feature:911616-911700:1:exon
so has part: feature:914841-914918:1:exon
so has part: feature:916228-916349:1:exon
so has part: feature:917158-917265:1:exon
so has part: feature:918076-918276:1:exon
so has part: feature:920830-920926:1:exon
so has part: feature:921043-921076:1:exon
so has part: feature:922189-922303:1:exon
so has part: feature:924058-924222:1:exon
so has part: feature:925495-925599:1:exon
so has part: feature:925865-925925:1:exon
so has part: feature:926520-926629:1:exon
so has part: feature:926953-927016:1:exon
so has part: feature:928689-928828:1:exon
so has part: feature:929156-929290:1:exon
so has part: feature:930054-930273:1:exon
so has part: feature:931888-932030:1:exon
so has part: feature:933064-933120:1:exon
so has part: feature:934246-934353:1:exon
so has part: feature:935198-935353:1:exon
so has part: feature:935457-935504:1:exon
so has part: feature:937743-937886:1:exon

XP_032935019.1
type: Protein
SIO_000068: ncbiprotein

position:901857:1
position: 901857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:937886:1
position: 937886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:901857-901979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:911616-911700:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:914841-914918:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:916228-916349:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:917158-917265:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:918076-918276:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:920830-920926:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:921043-921076:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:922189-922303:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:924058-924222:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:925495-925599:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:925865-925925:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:926520-926629:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:926953-927016:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:928689-928828:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:929156-929290:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:930054-930273:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:931888-932030:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:933064-933120:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:934246-934353:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:935198-935353:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:935457-935504:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:937743-937886:1:exon

KPNB1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: KPNB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 946530..986975
location: region:946530-986975:1
so has part: feature:946530-986975:1:exon
subclass of: SO_0000010

117006660
type: Gene
SIO_000068: ncbigene

position:946530:1
position: 946530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:986975:1
position: 986975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:946530-986975:1:exon

KPNB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: KPNB1
product: karyopherin subunit beta 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 ESTs, 16 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033079209.1
SIO_010081: KPNB1
subclass of: SO_0000673
so part of: KPNB1
location: join(946530..946643,946899..946957,950442..950624,954268..954468,957589..957741,959407..959466,960615..960704,962401..962511,963015..963116,966652..966876,968696..968887,971248..971378,973053..973200,973445..973516,976205..976349,976941..977023,978312..978419,979666..979809,981392..981497,983220..983334,984734..984899)
location: region:946530-984899:1
so has part: feature:946530-946643:1:exon
so has part: feature:946899-946957:1:exon
so has part: feature:950442-950624:1:exon
so has part: feature:954268-954468:1:exon
so has part: feature:957589-957741:1:exon
so has part: feature:959407-959466:1:exon
so has part: feature:960615-960704:1:exon
so has part: feature:962401-962511:1:exon
so has part: feature:963015-963116:1:exon
so has part: feature:966652-966876:1:exon
so has part: feature:968696-968887:1:exon
so has part: feature:971248-971378:1:exon
so has part: feature:973053-973200:1:exon
so has part: feature:973445-973516:1:exon
so has part: feature:976205-976349:1:exon
so has part: feature:976941-977023:1:exon
so has part: feature:978312-978419:1:exon
so has part: feature:979666-979809:1:exon
so has part: feature:981392-981497:1:exon
so has part: feature:983220-983334:1:exon
so has part: feature:984734-984899:1:exon

position:984899:1
position: 984899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:946530-946643:1:exon

position:946643:1
position: 946643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:946899-946957:1:exon

position:946899:1
position: 946899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:946957:1
position: 946957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:950442-950624:1:exon

position:950442:1
position: 950442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:950624:1
position: 950624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:954268-954468:1:exon

position:954268:1
position: 954268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:954468:1
position: 954468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:957589-957741:1:exon

position:957589:1
position: 957589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957741:1
position: 957741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:959407-959466:1:exon

position:959407:1
position: 959407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:959466:1
position: 959466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:960615-960704:1:exon

position:960615:1
position: 960615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:960704:1
position: 960704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:962401-962511:1:exon

position:962401:1
position: 962401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:962511:1
position: 962511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:963015-963116:1:exon

position:963015:1
position: 963015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963116:1
position: 963116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:966652-966876:1:exon

position:966652:1
position: 966652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:966876:1
position: 966876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:968696-968887:1:exon

position:968696:1
position: 968696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:968887:1
position: 968887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:971248-971378:1:exon

position:971248:1
position: 971248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:971378:1
position: 971378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:973053-973200:1:exon

position:973053:1
position: 973053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:973200:1
position: 973200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:973445-973516:1:exon

position:973445:1
position: 973445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:973516:1
position: 973516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:976205-976349:1:exon

position:976205:1
position: 976205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:976349:1
position: 976349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:976941-977023:1:exon

position:976941:1
position: 976941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:977023:1
position: 977023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:978312-978419:1:exon

position:978312:1
position: 978312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:978419:1
position: 978419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:979666-979809:1:exon

position:979666:1
position: 979666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:979809:1
position: 979809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:981392-981497:1:exon

position:981392:1
position: 981392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:981497:1
position: 981497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:983220-983334:1:exon

position:983220:1
position: 983220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983334:1
position: 983334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:984734-984899:1:exon

position:984734:1
position: 984734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KPNB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: KPNB1
product: karyopherin subunit beta 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033079210.2
SIO_010081: KPNB1
subclass of: SO_0000673
so part of: KPNB1
location: join(946542..946643,946899..946957,950442..950624,954268..954468,957589..957741,959407..959466,960615..960704,962401..962511,963015..963116,966652..966876,968696..968887,971248..971378,973053..973200,973445..973516,976205..976349,976941..977023,978312..978419,979666..979809,981392..981497,983220..983334,984734..984895,986749..986975)
location: region:946542-986975:1
so has part: feature:946542-946643:1:exon
so has part: feature:946899-946957:1:exon
so has part: feature:950442-950624:1:exon
so has part: feature:954268-954468:1:exon
so has part: feature:957589-957741:1:exon
so has part: feature:959407-959466:1:exon
so has part: feature:960615-960704:1:exon
so has part: feature:962401-962511:1:exon
so has part: feature:963015-963116:1:exon
so has part: feature:966652-966876:1:exon
so has part: feature:968696-968887:1:exon
so has part: feature:971248-971378:1:exon
so has part: feature:973053-973200:1:exon
so has part: feature:973445-973516:1:exon
so has part: feature:976205-976349:1:exon
so has part: feature:976941-977023:1:exon
so has part: feature:978312-978419:1:exon
so has part: feature:979666-979809:1:exon
so has part: feature:981392-981497:1:exon
so has part: feature:983220-983334:1:exon
so has part: feature:984734-984895:1:exon
so has part: feature:986749-986975:1:exon

position:946542:1
position: 946542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:946542-946643:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:946899-946957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:950442-950624:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:954268-954468:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:957589-957741:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:959407-959466:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:960615-960704:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:962401-962511:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:963015-963116:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:966652-966876:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:968696-968887:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:971248-971378:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:973053-973200:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:973445-973516:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:976205-976349:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:976941-977023:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:978312-978419:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:979666-979809:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:981392-981497:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:983220-983334:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:984734-984895:1:exon

position:984895:1
position: 984895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:986749-986975:1:exon

position:986749:1
position: 986749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KPNB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: KPNB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: importin subunit beta-1 isoform X2
translation: MELITILEKTVSPDCSELEAAQKFLEQAAIENLPTFLVELSKVLANPGNSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNFVLQTLGTETYRPSSASQCVAGIACAEIPMNQWPELIPQLVANVTNQHSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPNQLKPLVIQAMPTLIELMKDPSVVVRDTTAWTVGRICEMLPEAAINDVYLAPLLQCLMEGLGAEPRVATNVCWAFSSLAEAAYEAADVADDQEEPATYCLSSSFELIVQKLLETADRPDGHQNNLRSSAYESLMEIVKNSAKDCYPAVQKTTLVIMERLQQVLQMESHIQSTSDRIQFNDLQSLLCATLQNVLRKVQHQDALQISDVVMASLLRMFQSTAGSGGVQEDALMAVSTLVEVLGGEFLKYMDAFKPFLGIGLKNYAEYQVCLSAVGLVGDLCRALQSNILPFCDEVMQLLLENLGNENVHRSVKPQILSVFGDIALAIGGEFKKYLDVVLNTLQQASQAQVDKSDYDMVDYLNELREGCLEAYTGIIQGLKGDQENVHPDVMLVQPRVEFILSYIDHIAGDEDHTDGVVACAAGLIGDLCTAFGKDVLKLVEARPMIHELLTEGRRSKTNKTKTLATWATKELRKLKNQA
SIO_010081: KPNB1
subclass of: SO_0000673
so part of: KPNB1
location: join(946604..946643,946899..946957,950442..950624,954268..954468,957589..957741,959407..959466,960615..960704,962401..962511,963015..963116,966652..966876,968696..968887,971248..971378,973053..973200,973445..973516,976205..976349,976941..977023,978312..978419,979666..979809,981392..981497,983220..983334,984734..984895,986749)
location: region:946604-986749:1
so has part: feature:946604-946643:1:exon
so has part: feature:946899-946957:1:exon
so has part: feature:950442-950624:1:exon
so has part: feature:954268-954468:1:exon
so has part: feature:957589-957741:1:exon
so has part: feature:959407-959466:1:exon
so has part: feature:960615-960704:1:exon
so has part: feature:962401-962511:1:exon
so has part: feature:963015-963116:1:exon
so has part: feature:966652-966876:1:exon
so has part: feature:968696-968887:1:exon
so has part: feature:971248-971378:1:exon
so has part: feature:973053-973200:1:exon
so has part: feature:973445-973516:1:exon
so has part: feature:976205-976349:1:exon
so has part: feature:976941-977023:1:exon
so has part: feature:978312-978419:1:exon
so has part: feature:979666-979809:1:exon
so has part: feature:981392-981497:1:exon
so has part: feature:983220-983334:1:exon
so has part: feature:984734-984895:1:exon
so has part: feature:986749-986749:1:exon

XP_032935101.1
type: Protein
SIO_000068: ncbiprotein

position:946604:1
position: 946604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:946604-946643:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:946899-946957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:950442-950624:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:954268-954468:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:957589-957741:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:959407-959466:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:960615-960704:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:962401-962511:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:963015-963116:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:966652-966876:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:968696-968887:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:971248-971378:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:973053-973200:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:973445-973516:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:976205-976349:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:976941-977023:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:978312-978419:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:979666-979809:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:981392-981497:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:983220-983334:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:984734-984895:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:986749-986749:1:exon

KPNB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: KPNB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: importin subunit beta-1 isoform X1
translation: MELITILEKTVSPDCSELEAAQKFLEQAAIENLPTFLVELSKVLANPGNSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNFVLQTLGTETYRPSSASQCVAGIACAEIPMNQWPELIPQLVANVTNQHSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPNQLKPLVIQAMPTLIELMKDPSVVVRDTTAWTVGRICEMLPEAAINDVYLAPLLQCLMEGLGAEPRVATNVCWAFSSLAEAAYEAADVADDQEEPATYCLSSSFELIVQKLLETADRPDGHQNNLRSSAYESLMEIVKNSAKDCYPAVQKTTLVIMERLQQVLQMESHIQSTSDRIQFNDLQSLLCATLQNVLRKVQHQDALQISDVVMASLLRMFQSTAGSGGVQEDALMAVSTLVEVLGGEFLKYMDAFKPFLGIGLKNYAEYQVCLSAVGLVGDLCRALQSNILPFCDEVMQLLLENLGNENVHRSVKPQILSVFGDIALAIGGEFKKYLDVVLNTLQQASQAQVDKSDYDMVDYLNELREGCLEAYTGIIQGLKGDQENVHPDVMLVQPRVEFILSYIDHIAGDEDHTDGVVACAAGLIGDLCTAFGKDVLKLVEARPMIHELLTEGRRSKTNKTKTLATWATKELRKLKNQAW
SIO_010081: KPNB1
subclass of: SO_0000673
so part of: KPNB1
location: join(946604..946643,946899..946957,950442..950624,954268..954468,957589..957741,959407..959466,960615..960704,962401..962511,963015..963116,966652..966876,968696..968887,971248..971378,973053..973200,973445..973516,976205..976349,976941..977023,978312..978419,979666..979809,981392..981497,983220..983334,984734..984899)
location: region:946604-984899:1
so has part: feature:946604-946643:1:exon
so has part: feature:946899-946957:1:exon
so has part: feature:950442-950624:1:exon
so has part: feature:954268-954468:1:exon
so has part: feature:957589-957741:1:exon
so has part: feature:959407-959466:1:exon
so has part: feature:960615-960704:1:exon
so has part: feature:962401-962511:1:exon
so has part: feature:963015-963116:1:exon
so has part: feature:966652-966876:1:exon
so has part: feature:968696-968887:1:exon
so has part: feature:971248-971378:1:exon
so has part: feature:973053-973200:1:exon
so has part: feature:973445-973516:1:exon
so has part: feature:976205-976349:1:exon
so has part: feature:976941-977023:1:exon
so has part: feature:978312-978419:1:exon
so has part: feature:979666-979809:1:exon
so has part: feature:981392-981497:1:exon
so has part: feature:983220-983334:1:exon
so has part: feature:984734-984899:1:exon

XP_032935100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:946604-946643:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:946899-946957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:950442-950624:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:954268-954468:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:957589-957741:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:959407-959466:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:960615-960704:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:962401-962511:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:963015-963116:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:966652-966876:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:968696-968887:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:971248-971378:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:973053-973200:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:973445-973516:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:976205-976349:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:976941-977023:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:978312-978419:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:979666-979809:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:981392-981497:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:983220-983334:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:984734-984899:1:exon

TBKBP1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: TBKBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 998836..1013738
location: region:998836-1013738:1
so has part: feature:998836-1013738:1:exon
subclass of: SO_0000010

117006706
type: Gene
SIO_000068: ncbigene

position:998836:1
position: 998836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013738:1
position: 1013738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:998836-1013738:1:exon

TBKBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: TBKBP1
product: TBK1 binding protein 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_033079272.1
SIO_010081: TBKBP1
subclass of: SO_0000673
so part of: TBKBP1
location: join(998836..999143,1001448..1001674,1001752..1001874,1001972..1002076,1002376..1002517,1003567..1003727,1004733..1004782,1009536..1009654,1010840..1011689,1013295..1013738)
location: region:998836-1013738:1
so has part: feature:998836-999143:1:exon
so has part: feature:1001448-1001674:1:exon
so has part: feature:1001752-1001874:1:exon
so has part: feature:1001972-1002076:1:exon
so has part: feature:1002376-1002517:1:exon
so has part: feature:1003567-1003727:1:exon
so has part: feature:1004733-1004782:1:exon
so has part: feature:1009536-1009654:1:exon
so has part: feature:1010840-1011689:1:exon
so has part: feature:1013295-1013738:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:998836-999143:1:exon

position:999143:1
position: 999143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1001448-1001674:1:exon

position:1001448:1
position: 1001448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1001674:1
position: 1001674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1001752-1001874:1:exon

position:1001752:1
position: 1001752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1001874:1
position: 1001874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1001972-1002076:1:exon

position:1001972:1
position: 1001972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1002076:1
position: 1002076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1002376-1002517:1:exon

position:1002376:1
position: 1002376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1002517:1
position: 1002517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1003567-1003727:1:exon

position:1003567:1
position: 1003567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1003727:1
position: 1003727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1004733-1004782:1:exon

position:1004733:1
position: 1004733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1004782:1
position: 1004782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1009536-1009654:1:exon

position:1009536:1
position: 1009536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1009654:1
position: 1009654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1010840-1011689:1:exon

position:1010840:1
position: 1010840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011689:1
position: 1011689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1013295-1013738:1:exon

position:1013295:1
position: 1013295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TBKBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: TBKBP1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: TANK-binding kinase 1-binding protein 1
translation: MDSMFEDDISILTQEALGPDEDWLDSPNTDLSGEMCSASHFALITAYDDIKNRLTGXGEGDSTLKRRLKMYEVKHPLIGEFGEEHIFSLYEAKENSLLKSEKASLQQQLNQFQHELQKSKEREEQLEEMIQAYEKLCVEKADLETELGEMRALVETHLSRIRSLEQQLRQRDSGAFPGLGSPDVPFMALHPNPGLSHVLERAAGWQSRGLEAELEAARQENQRAQHREEQLKAECERLQQELKHLQDSREQEQSERDMAWVKKVGDDQVNLALAYTELTEELCRLRNLSSLQSQILRELLQEKSPNGGQRHSPLSQCHSPLSQCHSPLSQCHSPLSQCHSPLSQCHSPLSQCHSPAQQRRSPAPQCPSPVAPGRPQCQSPAVQRRSPGPPSQSPAQQRRSPAPGPCQSPAQQRRSPVPPXSQSPAQQRRSPAPPPPPCPSPTSASPHRLPGERMELPYAKPSSRHIKAGFQGRRSYSEVTNVALYQQSRSLWLQPEASTLPKHRPYGEVYLGGGAGAPLSAHEPFEEHVRFEKQSSDEEEWALPSPPSPEAGAIRCASFCAGFPVPDGDALNRTAAAYARAEHAQSWPSINLLLETVDSEVRSCPLCQLAFPIGYPDDALVKHIDSHLENSKI
SIO_010081: TBKBP1
subclass of: SO_0000673
so part of: TBKBP1
location: join(1001455..1001674,1001752..1001874,1001972..1002076,1002376..1002517,1003567..1003727,1004733..1004782,1009536..1009654,1010840..1011689,1013295..1013423)
location: region:1001455-1013423:1
so has part: feature:1001455-1001674:1:exon
so has part: feature:1001752-1001874:1:exon
so has part: feature:1001972-1002076:1:exon
so has part: feature:1002376-1002517:1:exon
so has part: feature:1003567-1003727:1:exon
so has part: feature:1004733-1004782:1:exon
so has part: feature:1009536-1009654:1:exon
so has part: feature:1010840-1011689:1:exon
so has part: feature:1013295-1013423:1:exon

XP_032935163.1
type: Protein
SIO_000068: ncbiprotein

position:1001455:1
position: 1001455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013423:1
position: 1013423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1001455-1001674:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1001752-1001874:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1001972-1002076:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1002376-1002517:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1003567-1003727:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1004733-1004782:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1009536-1009654:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1010840-1011689:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1013295-1013423:1:exon

TBX21
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: TBX21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1029305..1044212
location: region:1029305-1044212:1
so has part: feature:1029305-1044212:1:exon
subclass of: SO_0000010

117006588
type: Gene
SIO_000068: ncbigene

position:1029305:1
position: 1029305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1044212:1
position: 1044212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1029305-1044212:1:exon

TBX21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: TBX21
product: T-box transcription factor 21
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 6 bases in 4 codons; deleted 5 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 54% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033079119.2
SIO_010081: TBX21
subclass of: SO_0000673
so part of: TBX21
location: join(1029305..1029722,1037424..1037578,1037670..1037793,1038574..1038730,1040238..1040299,1041888..1042652,1044116..1044212)
location: region:1029305-1044212:1
so has part: feature:1029305-1029722:1:exon
so has part: feature:1037424-1037578:1:exon
so has part: feature:1037670-1037793:1:exon
so has part: feature:1038574-1038730:1:exon
so has part: feature:1040238-1040299:1:exon
so has part: feature:1041888-1042652:1:exon
so has part: feature:1044116-1044212:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1029305-1029722:1:exon

position:1029722:1
position: 1029722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1037424-1037578:1:exon

position:1037424:1
position: 1037424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037578:1
position: 1037578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1037670-1037793:1:exon

position:1037670:1
position: 1037670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037793:1
position: 1037793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1038574-1038730:1:exon

position:1038574:1
position: 1038574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038730:1
position: 1038730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1040238-1040299:1:exon

position:1040238:1
position: 1040238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040299:1
position: 1040299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1041888-1042652:1:exon

position:1041888:1
position: 1041888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1042652:1
position: 1042652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1044116-1044212:1:exon

position:1044116:1
position: 1044116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TBX21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: TBX21
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 6 bases in 4 codons; deleted 5 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: T-box transcription factor TBX21
translation: MGALEPGTGXPRAAAPMLSTVSSFTKDPRDTGTPPAFFGDGGTPEPGAAPLPYGAPGGFGGRFLGPCPPYRAPPPPAAPGEGYGXCRGCFRYGGAPLCPPLCALPGYRAAGKVQVMLNNYPLWAKFHKHQTEMIITKQGRRMFPFLSFNLSGLNPAAHYSVCVDVVLVDQHHWRYQGGKWVQCGKAEGTMPGNRLYXPPDSPNTGAHWMRQEVSFGKLKLTNNKGASNNVGQVIVLQSLHKYQPRLHVTEVKEGEGEDGYPSPHTHTFAFPETQFIAVTAYQNADITQLKIDHNPFAKGFRDNFDSMYTASESDRLTPSPPDPSGCQQLLPSPRFQPFLPEQFPLPPGRFFGGDRGGAALPLPPKDPPHWFFPPQQPPAPGSLEFGGYEGSYGGGKFQPYGVKPFGLPPTPHPPLPYYPEGGFGVTPGGWSAGQFGPKGTAAALGWYREHREDKGKELEGWASEPAAVVASGDSSDSGLYECKRRRVSPHPSSSEGXPPAPQRRHLRQGAAARRGLLRLLRQLGGEKEGSDPFFGCECSLELGVTINNHPPVGARGERGGGFMETSANRLGKGGRRGGILHPQALGGPAPLL
SIO_010081: TBX21
subclass of: SO_0000673
so part of: TBX21
location: join(1029305..1029722,1037424..1037578,1037670..1037793,1038574..1038730,1040238..1040299,1041888..1042652,1044116..1044212)
location: region:1029305-1044212:1
so has part: feature:1029305-1029722:1:exon
so has part: feature:1037424-1037578:1:exon
so has part: feature:1037670-1037793:1:exon
so has part: feature:1038574-1038730:1:exon
so has part: feature:1040238-1040299:1:exon
so has part: feature:1041888-1042652:1:exon
so has part: feature:1044116-1044212:1:exon

XP_032935010.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1029305-1029722:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1037424-1037578:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1037670-1037793:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1038574-1038730:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1040238-1040299:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1041888-1042652:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1044116-1044212:1:exon

OSBPL7
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: OSBPL7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1044015..1055801)
location: region:1044015-1055801:-1
so has part: feature:1044015-1055801:-1:exon
subclass of: SO_0000010

117006690
type: Gene
SIO_000068: ncbigene

position:1044015:-1
position: 1044015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1055801:-1
position: 1055801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1044015-1055801:-1:exon

OSBPL7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: OSBPL7
product: oxysterol binding protein like 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033079248.1
SIO_010081: OSBPL7
subclass of: SO_0000673
so part of: OSBPL7
location: complement(join(1044015..1044361,1045711..1045833,1045906..1046032,1046133..1046274,1047808..1047952,1048033..1048111,1048721..1048784,1048859..1048996,1050191..1050480,1051213..1051303,1051766..1051897,1052015..1052095,1052191..1052315,1052403..1052532,1052631..1052723,1052799..1052902,1052980..1053100,1053178..1053279,1053360..1053473,1053593..1053646,1053745..1053867,1054022..1054214,1055754..1055801))
location: region:1044015-1055801:-1
so has part: feature:1055754-1055801:-1:exon
so has part: feature:1054022-1054214:-1:exon
so has part: feature:1053745-1053867:-1:exon
so has part: feature:1053593-1053646:-1:exon
so has part: feature:1053360-1053473:-1:exon
so has part: feature:1053178-1053279:-1:exon
so has part: feature:1052980-1053100:-1:exon
so has part: feature:1052799-1052902:-1:exon
so has part: feature:1052631-1052723:-1:exon
so has part: feature:1052403-1052532:-1:exon
so has part: feature:1052191-1052315:-1:exon
so has part: feature:1052015-1052095:-1:exon
so has part: feature:1051766-1051897:-1:exon
so has part: feature:1051213-1051303:-1:exon
so has part: feature:1050191-1050480:-1:exon
so has part: feature:1048859-1048996:-1:exon
so has part: feature:1048721-1048784:-1:exon
so has part: feature:1048033-1048111:-1:exon
so has part: feature:1047808-1047952:-1:exon
so has part: feature:1046133-1046274:-1:exon
so has part: feature:1045906-1046032:-1:exon
so has part: feature:1045711-1045833:-1:exon
so has part: feature:1044015-1044361:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1055754-1055801:-1:exon

position:1055754:-1
position: 1055754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1054022-1054214:-1:exon

position:1054022:-1
position: 1054022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1054214:-1
position: 1054214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1053745-1053867:-1:exon

position:1053745:-1
position: 1053745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1053867:-1
position: 1053867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1053593-1053646:-1:exon

position:1053593:-1
position: 1053593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1053646:-1
position: 1053646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1053360-1053473:-1:exon

position:1053360:-1
position: 1053360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1053473:-1
position: 1053473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1053178-1053279:-1:exon

position:1053178:-1
position: 1053178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1053279:-1
position: 1053279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1052980-1053100:-1:exon

position:1052980:-1
position: 1052980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1053100:-1
position: 1053100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1052799-1052902:-1:exon

position:1052799:-1
position: 1052799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052902:-1
position: 1052902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1052631-1052723:-1:exon

position:1052631:-1
position: 1052631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052723:-1
position: 1052723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1052403-1052532:-1:exon

position:1052403:-1
position: 1052403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052532:-1
position: 1052532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1052191-1052315:-1:exon

position:1052191:-1
position: 1052191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052315:-1
position: 1052315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1052015-1052095:-1:exon

position:1052015:-1
position: 1052015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052095:-1
position: 1052095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1051766-1051897:-1:exon

position:1051766:-1
position: 1051766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1051897:-1
position: 1051897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1051213-1051303:-1:exon

position:1051213:-1
position: 1051213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1051303:-1
position: 1051303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1050191-1050480:-1:exon

position:1050191:-1
position: 1050191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1050480:-1
position: 1050480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1048859-1048996:-1:exon

position:1048859:-1
position: 1048859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1048996:-1
position: 1048996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1048721-1048784:-1:exon

position:1048721:-1
position: 1048721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1048784:-1
position: 1048784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1048033-1048111:-1:exon

position:1048033:-1
position: 1048033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1048111:-1
position: 1048111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1047808-1047952:-1:exon

position:1047808:-1
position: 1047808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1047952:-1
position: 1047952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1046133-1046274:-1:exon

position:1046133:-1
position: 1046133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1046274:-1
position: 1046274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1045906-1046032:-1:exon

position:1045906:-1
position: 1045906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1046032:-1
position: 1046032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1045711-1045833:-1:exon

position:1045711:-1
position: 1045711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1045833:-1
position: 1045833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1044015-1044361:-1:exon

position:1044361:-1
position: 1044361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OSBPL7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: OSBPL7
product: oxysterol binding protein like 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033079247.1
SIO_010081: OSBPL7
subclass of: SO_0000673
so part of: OSBPL7
location: complement(join(1044015..1044361,1045711..1045833,1045906..1046032,1046133..1046274,1047808..1047952,1048033..1048111,1048721..1048784,1048859..1048996,1050191..1050480,1051213..1051303,1051766..1051897,1052015..1052095,1052191..1052315,1052403..1052532,1052625..1052723,1052799..1052902,1052980..1053100,1053178..1053279,1053360..1053473,1053593..1053646,1053745..1053867,1054022..1054214,1055754..1055801))
location: region:1044015-1055801:-1
so has part: feature:1055754-1055801:-1:exon
so has part: feature:1054022-1054214:-1:exon
so has part: feature:1053745-1053867:-1:exon
so has part: feature:1053593-1053646:-1:exon
so has part: feature:1053360-1053473:-1:exon
so has part: feature:1053178-1053279:-1:exon
so has part: feature:1052980-1053100:-1:exon
so has part: feature:1052799-1052902:-1:exon
so has part: feature:1052625-1052723:-1:exon
so has part: feature:1052403-1052532:-1:exon
so has part: feature:1052191-1052315:-1:exon
so has part: feature:1052015-1052095:-1:exon
so has part: feature:1051766-1051897:-1:exon
so has part: feature:1051213-1051303:-1:exon
so has part: feature:1050191-1050480:-1:exon
so has part: feature:1048859-1048996:-1:exon
so has part: feature:1048721-1048784:-1:exon
so has part: feature:1048033-1048111:-1:exon
so has part: feature:1047808-1047952:-1:exon
so has part: feature:1046133-1046274:-1:exon
so has part: feature:1045906-1046032:-1:exon
so has part: feature:1045711-1045833:-1:exon
so has part: feature:1044015-1044361:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1055754-1055801:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1054022-1054214:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1053745-1053867:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1053593-1053646:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1053360-1053473:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1053178-1053279:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1052980-1053100:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1052799-1052902:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1052625-1052723:-1:exon

position:1052625:-1
position: 1052625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1052403-1052532:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1052191-1052315:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1052015-1052095:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1051766-1051897:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1051213-1051303:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1050191-1050480:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1048859-1048996:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1048721-1048784:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1048033-1048111:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1047808-1047952:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1046133-1046274:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1045906-1046032:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1045711-1045833:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1044015-1044361:-1:exon

OSBPL7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: OSBPL7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxysterol-binding protein-related protein 7 isoform X2
translation: MGSHEKDPSSPKRALSRSNSTVSSKHSSVQQGSESWEVVEEPRGRGSPGQQPQRHEGYLLKKRKWPLKGWHKRYFVLENGILKYSTTRQDVLKGKLHGAIDVRQSVMSVNKKAQRVDLDTEDNIYHLKIKTPELFSSWVSSLCSHHHGERPEPCPQGGPSTKGQWTRILPSGSAPALSTLASSRDKVNAWLKDSEGLERCSAELSECQAKLQELTGMLQHLEALHRIPSAPLIPGSQPSAATERPKKGRRSTKIWCTQSFAKDDTIGRVGRLHGSVPNLSRYLEPSQSQLPFSVPPEYTQLQRSFWVLAQKVHGSLSSVVAALVAERARLEEMRQALDRQGPAPRPGSAGTAGPALRRFHSLSVSSDTTLDSFASLHPDEPDALPAKGREQQLSNRSIVSLADSHTEFFDACEVFLSASSSENEPSEDESCISEVTASVCEESAEPGGPGRAPTGAERPGLPAEPPPLEPPLELPGPDPRRRSRLPAPPAPSGDVSLWGLLRSSVGKDLSRVALPVQLNEPLNTLQRLCEELEYSALLDRASRARDPRQRLVYVAAFAVSAYASTYYRAGSKPFNPVLGETYECVRPDRGFRFISEQVSHHPPISACHAESDNFVFWQDMRWKNKFWGKSLEIVPVGTVNVQLPRTGDHYEWNKVTTCIHNVLSGPRWIEHYGEVLIRNTRDASFHCKLTFCKARYWGAGANEVQGAVLSRSGTPVERLAGKWHEGLHRGPAPGQCVWKANPMPRDHERNYGFTQFALELNELTPELRRVLPSTDTRLRPDQRYLEEGNVPAAEAQKRQIEQLQRDRRRVMEENNITHQARFFRRLTDSSGKESWVSNNTYWKLRLEPGFAHLDSAVLW
SIO_010081: OSBPL7
subclass of: SO_0000673
so part of: OSBPL7
location: complement(join(1044253..1044361,1045711..1045833,1045906..1046032,1046133..1046274,1047808..1047952,1048033..1048111,1048721..1048784,1048859..1048996,1050191..1050480,1051213..1051303,1051766..1051897,1052015..1052095,1052191..1052315,1052403..1052532,1052631..1052723,1052799..1052902,1052980..1053100,1053178..1053279,1053360..1053473,1053593..1053646,1053745..1053867,1054022..1054114))
location: region:1044253-1054114:-1
so has part: feature:1054022-1054114:-1:exon
so has part: feature:1053745-1053867:-1:exon
so has part: feature:1053593-1053646:-1:exon
so has part: feature:1053360-1053473:-1:exon
so has part: feature:1053178-1053279:-1:exon
so has part: feature:1052980-1053100:-1:exon
so has part: feature:1052799-1052902:-1:exon
so has part: feature:1052631-1052723:-1:exon
so has part: feature:1052403-1052532:-1:exon
so has part: feature:1052191-1052315:-1:exon
so has part: feature:1052015-1052095:-1:exon
so has part: feature:1051766-1051897:-1:exon
so has part: feature:1051213-1051303:-1:exon
so has part: feature:1050191-1050480:-1:exon
so has part: feature:1048859-1048996:-1:exon
so has part: feature:1048721-1048784:-1:exon
so has part: feature:1048033-1048111:-1:exon
so has part: feature:1047808-1047952:-1:exon
so has part: feature:1046133-1046274:-1:exon
so has part: feature:1045906-1046032:-1:exon
so has part: feature:1045711-1045833:-1:exon
so has part: feature:1044253-1044361:-1:exon

XP_032935139.1
type: Protein
SIO_000068: ncbiprotein

position:1044253:-1
position: 1044253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1054114:-1
position: 1054114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1054022-1054114:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1053745-1053867:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1053593-1053646:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1053360-1053473:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1053178-1053279:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1052980-1053100:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1052799-1052902:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1052631-1052723:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1052403-1052532:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1052191-1052315:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1052015-1052095:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1051766-1051897:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1051213-1051303:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1050191-1050480:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1048859-1048996:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1048721-1048784:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1048033-1048111:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1047808-1047952:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1046133-1046274:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1045906-1046032:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1045711-1045833:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1044253-1044361:-1:exon

OSBPL7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: OSBPL7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxysterol-binding protein-related protein 7 isoform X1
translation: MGSHEKDPSSPKRALSRSNSTVSSKHSSVQQGSESWEVVEEPRGRGSPGQQPQRHEGYLLKKRKWPLKGWHKRYFVLENGILKYSTTRQDVLKGKLHGAIDVRQSVMSVNKKAQRVDLDTEDNIYHLKIKTPELFSSWVSSLCSHHHGERPEPCPQGGPSTKGQWTRILPSGSAPALSTLASSRDKVNAWLKDSEGLERCSAELSECQAKLQELTGMLQHLEALHRIPSAPLIPGSQPSAATERPKKGRRSTKIWCTQSFAKDDTIGRVRVGRLHGSVPNLSRYLEPSQSQLPFSVPPEYTQLQRSFWVLAQKVHGSLSSVVAALVAERARLEEMRQALDRQGPAPRPGSAGTAGPALRRFHSLSVSSDTTLDSFASLHPDEPDALPAKGREQQLSNRSIVSLADSHTEFFDACEVFLSASSSENEPSEDESCISEVTASVCEESAEPGGPGRAPTGAERPGLPAEPPPLEPPLELPGPDPRRRSRLPAPPAPSGDVSLWGLLRSSVGKDLSRVALPVQLNEPLNTLQRLCEELEYSALLDRASRARDPRQRLVYVAAFAVSAYASTYYRAGSKPFNPVLGETYECVRPDRGFRFISEQVSHHPPISACHAESDNFVFWQDMRWKNKFWGKSLEIVPVGTVNVQLPRTGDHYEWNKVTTCIHNVLSGPRWIEHYGEVLIRNTRDASFHCKLTFCKARYWGAGANEVQGAVLSRSGTPVERLAGKWHEGLHRGPAPGQCVWKANPMPRDHERNYGFTQFALELNELTPELRRVLPSTDTRLRPDQRYLEEGNVPAAEAQKRQIEQLQRDRRRVMEENNITHQARFFRRLTDSSGKESWVSNNTYWKLRLEPGFAHLDSAVLW
SIO_010081: OSBPL7
subclass of: SO_0000673
so part of: OSBPL7
location: complement(join(1044253..1044361,1045711..1045833,1045906..1046032,1046133..1046274,1047808..1047952,1048033..1048111,1048721..1048784,1048859..1048996,1050191..1050480,1051213..1051303,1051766..1051897,1052015..1052095,1052191..1052315,1052403..1052532,1052625..1052723,1052799..1052902,1052980..1053100,1053178..1053279,1053360..1053473,1053593..1053646,1053745..1053867,1054022..1054114))
location: region:1044253-1054114:-1
so has part: feature:1054022-1054114:-1:exon
so has part: feature:1053745-1053867:-1:exon
so has part: feature:1053593-1053646:-1:exon
so has part: feature:1053360-1053473:-1:exon
so has part: feature:1053178-1053279:-1:exon
so has part: feature:1052980-1053100:-1:exon
so has part: feature:1052799-1052902:-1:exon
so has part: feature:1052625-1052723:-1:exon
so has part: feature:1052403-1052532:-1:exon
so has part: feature:1052191-1052315:-1:exon
so has part: feature:1052015-1052095:-1:exon
so has part: feature:1051766-1051897:-1:exon
so has part: feature:1051213-1051303:-1:exon
so has part: feature:1050191-1050480:-1:exon
so has part: feature:1048859-1048996:-1:exon
so has part: feature:1048721-1048784:-1:exon
so has part: feature:1048033-1048111:-1:exon
so has part: feature:1047808-1047952:-1:exon
so has part: feature:1046133-1046274:-1:exon
so has part: feature:1045906-1046032:-1:exon
so has part: feature:1045711-1045833:-1:exon
so has part: feature:1044253-1044361:-1:exon

XP_032935138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1054022-1054114:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1053745-1053867:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1053593-1053646:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1053360-1053473:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1053178-1053279:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1052980-1053100:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1052799-1052902:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1052625-1052723:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1052403-1052532:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1052191-1052315:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1052015-1052095:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1051766-1051897:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1051213-1051303:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1050191-1050480:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1048859-1048996:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1048721-1048784:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1048033-1048111:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1047808-1047952:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1046133-1046274:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1045906-1046032:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1045711-1045833:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1044253-1044361:-1:exon

MRPL10
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: MRPL10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1056805..1062881)
location: region:1056805-1062881:-1
so has part: feature:1056805-1062881:-1:exon
subclass of: SO_0000010

117006444
type: Gene
SIO_000068: ncbigene

position:1056805:-1
position: 1056805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1062881:-1
position: 1062881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1056805-1062881:-1:exon

MRPL10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: MRPL10
product: mitochondrial ribosomal protein L10
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033078904.2
SIO_010081: MRPL10
subclass of: SO_0000673
so part of: MRPL10
location: complement(join(1056805..1057376,1058561..1058705,1059761..1059925,1061675..1061844,1062797..1062881))
location: region:1056805-1062881:-1
so has part: feature:1062797-1062881:-1:exon
so has part: feature:1061675-1061844:-1:exon
so has part: feature:1059761-1059925:-1:exon
so has part: feature:1058561-1058705:-1:exon
so has part: feature:1056805-1057376:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1062797-1062881:-1:exon

position:1062797:-1
position: 1062797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1061675-1061844:-1:exon

position:1061675:-1
position: 1061675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1061844:-1
position: 1061844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1059761-1059925:-1:exon

position:1059761:-1
position: 1059761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1059925:-1
position: 1059925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1058561-1058705:-1:exon

position:1058561:-1
position: 1058561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1058705:-1
position: 1058705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1056805-1057376:-1:exon

position:1057376:-1
position: 1057376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MRPL10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: MRPL10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L10, mitochondrial
translation: MAALGGGGTRWRRAWLPALQLLRRGSKAVTRHWKAMHLQRQKLMAVTEYLPPRPAVPPRCLPRPSAHGVQEDGQARVLRRQVQDTLSASRMVAVCHYNPMADEDVATFRHYLRKHGIHVKFVLNEIARPVVAQSKFRNLLPLFVSRNILLVSAEPRAREMLRVLRGVPQVILLGAVIDGTILSRRGVENFAQLPSLEVSQGQTVAALSLLPSQTSSLLQQGPARLTALLDEHIRRLRDAGAATEPPTGNH
SIO_010081: MRPL10
subclass of: SO_0000673
so part of: MRPL10
location: complement(join(1057144..1057376,1058561..1058705,1059761..1059925,1061675..1061844,1062797..1062836))
location: region:1057144-1062836:-1
so has part: feature:1062797-1062836:-1:exon
so has part: feature:1061675-1061844:-1:exon
so has part: feature:1059761-1059925:-1:exon
so has part: feature:1058561-1058705:-1:exon
so has part: feature:1057144-1057376:-1:exon

XP_032934795.1
type: Protein
SIO_000068: ncbiprotein

position:1057144:-1
position: 1057144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1062836:-1
position: 1062836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1062797-1062836:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1061675-1061844:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1059761-1059925:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1058561-1058705:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1057144-1057376:-1:exon

LOC117006366
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117006366
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1063337..1063738
location: region:1063337-1063738:1
so has part: feature:1063337-1063738:1:exon
subclass of: SO_0000011

117006366
type: Gene
SIO_000068: ncbigene

position:1063337:1
position: 1063337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1063738:1
position: 1063738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1063337-1063738:1:exon

LOC117006366
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117006366
product: uncharacterized LOC117006366
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004419983.1
SIO_010081: LOC117006366
subclass of: SO_0000673
so part of: LOC117006366
location: join(1063337..1063415,1063496..1063556,1063636..1063738)
location: region:1063337-1063738:1
so has part: feature:1063337-1063415:1:exon
so has part: feature:1063496-1063556:1:exon
so has part: feature:1063636-1063738:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1063337-1063415:1:exon

position:1063415:1
position: 1063415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1063496-1063556:1:exon

position:1063496:1
position: 1063496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1063556:1
position: 1063556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1063636-1063738:1:exon

position:1063636:1
position: 1063636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SCRN2
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: SCRN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1065128..1072123)
location: region:1065128-1072123:-1
so has part: feature:1065128-1072123:-1:exon
subclass of: SO_0000010

117006640
type: Gene
SIO_000068: ncbigene

position:1065128:-1
position: 1065128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1072123:-1
position: 1072123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1065128-1072123:-1:exon

SCRN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SCRN2
product: secernin 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 20 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033079185.1
SIO_010081: SCRN2
subclass of: SO_0000673
so part of: SCRN2
location: complement(join(1065128..1066841,1067768..1067945,1068017..1068182,1069157..1069372,1069684..1069883,1070647..1070829,1071374..1071545,1072089..1072123))
location: region:1065128-1072123:-1
so has part: feature:1072089-1072123:-1:exon
so has part: feature:1071374-1071545:-1:exon
so has part: feature:1070647-1070829:-1:exon
so has part: feature:1069684-1069883:-1:exon
so has part: feature:1069157-1069372:-1:exon
so has part: feature:1068017-1068182:-1:exon
so has part: feature:1067768-1067945:-1:exon
so has part: feature:1065128-1066841:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1072089-1072123:-1:exon

position:1072089:-1
position: 1072089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1071374-1071545:-1:exon

position:1071374:-1
position: 1071374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1071545:-1
position: 1071545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1070647-1070829:-1:exon

position:1070647:-1
position: 1070647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1070829:-1
position: 1070829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1069684-1069883:-1:exon

position:1069684:-1
position: 1069684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1069883:-1
position: 1069883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1069157-1069372:-1:exon

position:1069157:-1
position: 1069157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1069372:-1
position: 1069372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1068017-1068182:-1:exon

position:1068017:-1
position: 1068017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1068182:-1
position: 1068182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1067768-1067945:-1:exon

position:1067768:-1
position: 1067768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067945:-1
position: 1067945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1065128-1066841:-1:exon

position:1066841:-1
position: 1066841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SCRN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SCRN2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: secernin-2
translation: MAGQAPVPSSCDCFVALPPHTASPAVIFGKNADRPRDEVQEIVYVPAATHRPGDKVQCTYLEIEQVQHTHAVVLSRPAWLWGAEMGANDRGVCVGNEGVWTREPTGEEEALLGMDLVRLGLERGGSAREALEVITALLERYGQGGSCKEEPVPFVYHNTFLLADRTEAWVLETAGRYWAAQRIREGSRNISNQLSIGSDITAEHAGLRERARSRGWWSGHGEFSFARVFSLDKQPPRMEAAKARFQAGKELLRQHQGDITAETLMSILRDKESGICVDTEGFRTAGSMVSVLPRDPALPCVHFFTATPDPSRSVFKPFVFVAGIKPAPQVRSPSFPQDPAKQIPRFQRSVDRRHELYRRHQAALELMEQDRERGQQLLETLQELEKQGLEGMRELLQGTVTPSPEELADLFFDCVEAELKFYT
SIO_010081: SCRN2
subclass of: SO_0000673
so part of: SCRN2
location: complement(join(1066683..1066841,1067768..1067945,1068017..1068182,1069157..1069372,1069684..1069883,1070647..1070829,1071374..1071544))
location: region:1066683-1071544:-1
so has part: feature:1071374-1071544:-1:exon
so has part: feature:1070647-1070829:-1:exon
so has part: feature:1069684-1069883:-1:exon
so has part: feature:1069157-1069372:-1:exon
so has part: feature:1068017-1068182:-1:exon
so has part: feature:1067768-1067945:-1:exon
so has part: feature:1066683-1066841:-1:exon

XP_032935076.1
type: Protein
SIO_000068: ncbiprotein

position:1066683:-1
position: 1066683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1071544:-1
position: 1071544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1071374-1071544:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1070647-1070829:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1069684-1069883:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1069157-1069372:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1068017-1068182:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1067768-1067945:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1066683-1066841:-1:exon

SP6
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: SP6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1076023..1077132)
location: region:1076023-1077132:-1
so has part: feature:1076023-1077132:-1:exon
subclass of: SO_0000010

117006664
type: Gene
SIO_000068: ncbigene

position:1076023:-1
position: 1076023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1077132:-1
position: 1077132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1076023-1077132:-1:exon

SP6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SP6
product: Sp6 transcription factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033079215.1
SIO_010081: SP6
subclass of: SO_0000673
so part of: SP6
location: complement(1076023..1077132)
location: region:1076023-1077132:-1
so has part: feature:1076023-1077132:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1076023-1077132:-1:exon

SP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SP6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Sp6
translation: MLTAVCGSLGSQPSDAPRASPTHLDLQPLQPFQPHGPNAPGAPDFSSPLPPPELPLPGPDDAAFGATPGAYDPHGPPRLELPPDGPAAPGAYTKLLPAAPDMAHPYEPWFRPPHPGAPGEEGGGVNWWDLHAGASWMELPPGQGGGLQVPPAHPGLPAGLGGYGGGEHQLCAPPAHLLPPPAQHLLAAEGVKALEGPPEPRGPEGEGGGRPKGARRAVPRGGGQAACRCPNCQEAERGGPCPEGVKRKHLHNCHIPGCGKAYAKTSHLKAHLRWHSGDRPFVCNWLFCGKRFTRSDELQRHLQTHTGAKKFSCPVCGRVFMRSDHLGKHMKTHDGGKEGAEGEGKSAGEASAAKGGKRESEGGTATPTN
SIO_010081: SP6
subclass of: SO_0000673
so part of: SP6
location: complement(1076023..1077132)
location: region:1076023-1077132:-1
so has part: feature:1076023-1077132:-1:exon

XP_032935106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1076023-1077132:-1:exon

SP2
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: SP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1089509..1103009
location: region:1089509-1103009:1
so has part: feature:1089509-1103009:1:exon
subclass of: SO_0000010

117006676
type: Gene
SIO_000068: ncbigene

position:1089509:1
position: 1089509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1103009:1
position: 1103009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1089509-1103009:1:exon

SP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SP2
product: Sp2 transcription factor, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033079231.1
SIO_010081: SP2
subclass of: SO_0000673
so part of: SP2
location: join(1089509..1089574,1091189..1091266,1092450..1093403,1094927..1095203,1098836..1099010,1100366..1100559,1102148..1103009)
location: region:1089509-1103009:1
so has part: feature:1089509-1089574:1:exon
so has part: feature:1091189-1091266:1:exon
so has part: feature:1092450-1093403:1:exon
so has part: feature:1094927-1095203:1:exon
so has part: feature:1098836-1099010:1:exon
so has part: feature:1100366-1100559:1:exon
so has part: feature:1102148-1103009:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1089509-1089574:1:exon

position:1089574:1
position: 1089574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1091189-1091266:1:exon

position:1091189:1
position: 1091189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1091266:1
position: 1091266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1092450-1093403:1:exon

position:1092450:1
position: 1092450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1093403:1
position: 1093403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1094927-1095203:1:exon

position:1094927:1
position: 1094927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1095203:1
position: 1095203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1098836-1099010:1:exon

position:1098836:1
position: 1098836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1099010:1
position: 1099010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1100366-1100559:1:exon

position:1100366:1
position: 1100366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1100559:1
position: 1100559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1102148-1103009:1:exon

position:1102148:1
position: 1102148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SP2
product: Sp2 transcription factor, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033079232.1
SIO_010081: SP2
subclass of: SO_0000673
so part of: SP2
location: join(1089819..1089845,1091189..1091266,1092450..1093403,1094927..1095203,1098836..1099010,1100366..1100559,1102148..1103009)
location: region:1089819-1103009:1
so has part: feature:1089819-1089845:1:exon
so has part: feature:1091189-1091266:1:exon
so has part: feature:1092450-1093403:1:exon
so has part: feature:1094927-1095203:1:exon
so has part: feature:1098836-1099010:1:exon
so has part: feature:1100366-1100559:1:exon
so has part: feature:1102148-1103009:1:exon

position:1089819:1
position: 1089819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1089819-1089845:1:exon

position:1089845:1
position: 1089845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1091189-1091266:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1092450-1093403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1094927-1095203:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1098836-1099010:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1100366-1100559:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1102148-1103009:1:exon

SP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Sp2
translation: MAATAAVSPSEYLQPAAASAAQDSQPSPLALLAATCSKIGPPAVEAAVTPPAPPQPTPRKLVPIKPAPLPLGSAKNSIGILSSKGNLFQIQGSQVGTSYPGGQLVFAIQNPAVLNKGSRSSSSSSSSSSSNIQYQAVPQLQPGTAQTIQVQPNQIQIIPGTNQAILTPSSSSSHKPVPIKPAPAQKAGTASGVVKLPGGGNVTLTLPVNNLVSPEGSGQGQLVTDSPSKPGKKPRKKAMSPAQPAAVAVAEQVETVLIETTAENIIQAGNNLLIVQSPASGQPAVVQQVQVVQPKQESQVVQIPQQALRVVQAASATLPTVPQKSSQNFQIQAAEPTPTQIYFKSPSGELQTVLLQEQPPSSGTSCGSPGPAAGPARKPAPRKERPLPKIAPAGGILSLNAAQLAAAAQAMQTININGVQVQGVPVTITNSGGQQQLTVQNVSGNNVTISGLSPTQIQLQMEQALAGDVQPGEKRRRMACTCPNCKDGDKRPGDGSKKKHICHIPECGRTFRKTSLLRAHVRLHTGERPFVCNWVFCGKRFTRSDELQRHARTHTGDKRFECAQCQKRFMRSDHLTKHYKTHLVTKNL
SIO_010081: SP2
subclass of: SO_0000673
so part of: SP2
location: join(1091201..1091266,1092450..1093403,1094927..1095203,1098836..1099010,1100366..1100559,1102148..1102248)
location: region:1091201-1102248:1
so has part: feature:1091201-1091266:1:exon
so has part: feature:1092450-1093403:1:exon
so has part: feature:1094927-1095203:1:exon
so has part: feature:1098836-1099010:1:exon
so has part: feature:1100366-1100559:1:exon
so has part: feature:1102148-1102248:1:exon

XP_032935122.1
type: Protein
SIO_000068: ncbiprotein

position:1091201:1
position: 1091201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1102248:1
position: 1102248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1091201-1091266:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1092450-1093403:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1094927-1095203:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1098836-1099010:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1100366-1100559:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1102148-1102248:1:exon

SP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor Sp2
translation: MAATAAVSPSEYLQPAAASAAQDSQPSPLALLAATCSKIGPPAVEAAVTPPAPPQPTPRKLVPIKPAPLPLGSAKNSIGILSSKGNLFQIQGSQVGTSYPGGQLVFAIQNPAVLNKGSRSSSSSSSSSSSNIQYQAVPQLQPGTAQTIQVQPNQIQIIPGTNQAILTPSSSSSHKPVPIKPAPAQKAGTASGVVKLPGGGNVTLTLPVNNLVSPEGSGQGQLVTDSPSKPGKKPRKKAMSPAQPAAVAVAEQVETVLIETTAENIIQAGNNLLIVQSPASGQPAVVQQVQVVQPKQESQVVQIPQQALRVVQAASATLPTVPQKSSQNFQIQAAEPTPTQIYFKSPSGELQTVLLQEQPPSSGTSCGSPGPAAGPARKPAPRKERPLPKIAPAGGILSLNAAQLAAAAQAMQTININGVQVQGVPVTITNSGGQQQLTVQNVSGNNVTISGLSPTQIQLQMEQALAGDVQPGEKRRRMACTCPNCKDGDKRPGDGSKKKHICHIPECGRTFRKTSLLRAHVRLHTGERPFVCNWVFCGKRFTRSDELQRHARTHTGDKRFECAQCQKRFMRSDHLTKHYKTHLVTKNL
SIO_010081: SP2
subclass of: SO_0000673
so part of: SP2
location: join(1091201..1091266,1092450..1093403,1094927..1095203,1098836..1099010,1100366..1100559,1102148..1102248)
location: region:1091201-1102248:1
so has part: feature:1091201-1091266:1:exon
so has part: feature:1092450-1093403:1:exon
so has part: feature:1094927-1095203:1:exon
so has part: feature:1098836-1099010:1:exon
so has part: feature:1100366-1100559:1:exon
so has part: feature:1102148-1102248:1:exon

XP_032935123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1091201-1091266:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1092450-1093403:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1094927-1095203:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1098836-1099010:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1100366-1100559:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1102148-1102248:1:exon

PNPO
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: PNPO
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1103568..1110487
location: region:1103568-1110487:1
so has part: feature:1103568-1110487:1:exon
subclass of: SO_0000010

117006710
type: Gene
SIO_000068: ncbigene

position:1103568:1
position: 1103568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1110487:1
position: 1110487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1103568-1110487:1:exon

PNPO
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PNPO
product: pyridoxamine 5'-phosphate oxidase
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033079277.2
SIO_010081: PNPO
subclass of: SO_0000673
so part of: PNPO
location: join(1103568..1103674,1104499..1104623,1105405..1105504,1106888..1106941,1107829..1107957,1109610..1109680,1109752..1110487)
location: region:1103568-1110487:1
so has part: feature:1103568-1103674:1:exon
so has part: feature:1104499-1104623:1:exon
so has part: feature:1105405-1105504:1:exon
so has part: feature:1106888-1106941:1:exon
so has part: feature:1107829-1107957:1:exon
so has part: feature:1109610-1109680:1:exon
so has part: feature:1109752-1110487:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1103568-1103674:1:exon

position:1103674:1
position: 1103674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1104499-1104623:1:exon

position:1104499:1
position: 1104499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1104623:1
position: 1104623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1105405-1105504:1:exon

position:1105405:1
position: 1105405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1105504:1
position: 1105504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1106888-1106941:1:exon

position:1106888:1
position: 1106888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1106941:1
position: 1106941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1107829-1107957:1:exon

position:1107829:1
position: 1107829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1107957:1
position: 1107957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1109610-1109680:1:exon

position:1109610:1
position: 1109610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1109680:1
position: 1109680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1109752-1110487:1:exon

position:1109752:1
position: 1109752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PNPO
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PNPO
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyridoxine-5'-phosphate oxidase
translation: MELGALRKSYRGDTEAFEERHLVSLDPIEQFRAWFQEALECPGIGEVNAMCLATCTRDGRPSARMVLLKGFGQDGFRFFTNYESRKGRELDSNPFASLVFYWEPLCRQVRIEGSVKRLPEEESERYFHSRPRGSQIGALASRQSSVIPDREYLRQKNAELEERYRDTTVPRPHYWGAYIVEPEVLEFWQGQTNRLHDRIVFRRLRDREEPLGAMTHRGHGDWVYERFSP
SIO_010081: PNPO
subclass of: SO_0000673
so part of: PNPO
location: join(1103630..1103674,1104499..1104623,1105405..1105504,1106888..1106941,1107829..1107957,1109610..1109680,1109752..1109917)
location: region:1103630-1109917:1
so has part: feature:1103630-1103674:1:exon
so has part: feature:1104499-1104623:1:exon
so has part: feature:1105405-1105504:1:exon
so has part: feature:1106888-1106941:1:exon
so has part: feature:1107829-1107957:1:exon
so has part: feature:1109610-1109680:1:exon
so has part: feature:1109752-1109917:1:exon

XP_032935168.1
type: Protein
SIO_000068: ncbiprotein

position:1103630:1
position: 1103630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1109917:1
position: 1109917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1103630-1103674:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1104499-1104623:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1105405-1105504:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1106888-1106941:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1107829-1107957:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1109610-1109680:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1109752-1109917:1:exon

PRR15L
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: PRR15L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1112271..1112570)
location: region:1112271-1112570:-1
so has part: feature:1112271-1112570:-1:exon
subclass of: SO_0000010

117006325
type: Gene
SIO_000068: ncbigene

position:1112271:-1
position: 1112271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1112570:-1
position: 1112570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1112271-1112570:-1:exon

PRR15L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PRR15L
product: proline rich 15 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_033078698.1
SIO_010081: PRR15L
subclass of: SO_0000673
so part of: PRR15L
location: complement(1112271..1112570)
location: region:1112271-1112570:-1
so has part: feature:1112271-1112570:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1112271-1112570:-1:exon

PRR15L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PRR15L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich protein 15-like protein
translation: MADGHGWWKLTFLRKRQAAPTVLYESPDGHGAPGGDSAEGTGPEGTPGYAARLEKIVDKNTKGKHVKVSHSGRFKEKKKVRATLAEHPNLCGAGELEEK
SIO_010081: PRR15L
subclass of: SO_0000673
so part of: PRR15L
location: complement(1112271..1112570)
location: region:1112271-1112570:-1
so has part: feature:1112271-1112570:-1:exon

XP_032934589.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1112271-1112570:-1:exon

CDK5RAP3
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: CDK5RAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1115102..1125055
location: region:1115102-1125055:1
so has part: feature:1115102-1125055:1:exon
subclass of: SO_0000010

117006712
type: Gene
SIO_000068: ncbigene

position:1115102:1
position: 1115102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1125055:1
position: 1125055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1115102-1125055:1:exon

CDK5RAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CDK5RAP3
product: CDK5 regulatory subunit associated protein 3, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033079279.1
SIO_010081: CDK5RAP3
subclass of: SO_0000673
so part of: CDK5RAP3
location: join(1115102..1115147,1115412..1115469,1116117..1116248,1116630..1116730,1117077..1117125,1117856..1118034,1119259..1119395,1120505..1120649,1120742..1120822,1121199..1121264,1121424..1121489,1121567..1121642,1122358..1122446,1123189..1123394,1124628..1124799,1124870..1125055)
location: region:1115102-1125055:1
so has part: feature:1115102-1115147:1:exon
so has part: feature:1115412-1115469:1:exon
so has part: feature:1116117-1116248:1:exon
so has part: feature:1116630-1116730:1:exon
so has part: feature:1117077-1117125:1:exon
so has part: feature:1117856-1118034:1:exon
so has part: feature:1119259-1119395:1:exon
so has part: feature:1120505-1120649:1:exon
so has part: feature:1120742-1120822:1:exon
so has part: feature:1121199-1121264:1:exon
so has part: feature:1121424-1121489:1:exon
so has part: feature:1121567-1121642:1:exon
so has part: feature:1122358-1122446:1:exon
so has part: feature:1123189-1123394:1:exon
so has part: feature:1124628-1124799:1:exon
so has part: feature:1124870-1125055:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1115102-1115147:1:exon

position:1115147:1
position: 1115147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1115412-1115469:1:exon

position:1115412:1
position: 1115412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1115469:1
position: 1115469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1116117-1116248:1:exon

position:1116117:1
position: 1116117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1116248:1
position: 1116248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1116630-1116730:1:exon

position:1116630:1
position: 1116630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1116730:1
position: 1116730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1117077-1117125:1:exon

position:1117077:1
position: 1117077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1117125:1
position: 1117125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1117856-1118034:1:exon

position:1117856:1
position: 1117856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1118034:1
position: 1118034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1119259-1119395:1:exon

position:1119259:1
position: 1119259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1119395:1
position: 1119395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1120505-1120649:1:exon

position:1120505:1
position: 1120505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1120649:1
position: 1120649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1120742-1120822:1:exon

position:1120742:1
position: 1120742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1120822:1
position: 1120822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1121199-1121264:1:exon

position:1121199:1
position: 1121199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1121264:1
position: 1121264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1121424-1121489:1:exon

position:1121424:1
position: 1121424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1121489:1
position: 1121489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1121567-1121642:1:exon

position:1121567:1
position: 1121567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1121642:1
position: 1121642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1122358-1122446:1:exon

position:1122358:1
position: 1122358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1122446:1
position: 1122446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1123189-1123394:1:exon

position:1123189:1
position: 1123189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1123394:1
position: 1123394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1124628-1124799:1:exon

position:1124628:1
position: 1124628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1124799:1
position: 1124799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1124870-1125055:1:exon

position:1124870:1
position: 1124870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CDK5RAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CDK5RAP3
product: CDK5 regulatory subunit associated protein 3, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033079282.1
SIO_010081: CDK5RAP3
subclass of: SO_0000673
so part of: CDK5RAP3
location: join(1115102..1115147,1115412..1115469,1116117..1116248,1116630..1116730,1117077..1117125,1117856..1118034,1119259..1119395,1120505..1120649,1120742..1120822,1121424..1121489,1121567..1121642,1122358..1122446,1123189..1123394,1124628..1124799,1124870..1125055)
location: region:1115102-1125055:1
so has part: feature:1115102-1115147:1:exon
so has part: feature:1115412-1115469:1:exon
so has part: feature:1116117-1116248:1:exon
so has part: feature:1116630-1116730:1:exon
so has part: feature:1117077-1117125:1:exon
so has part: feature:1117856-1118034:1:exon
so has part: feature:1119259-1119395:1:exon
so has part: feature:1120505-1120649:1:exon
so has part: feature:1120742-1120822:1:exon
so has part: feature:1121424-1121489:1:exon
so has part: feature:1121567-1121642:1:exon
so has part: feature:1122358-1122446:1:exon
so has part: feature:1123189-1123394:1:exon
so has part: feature:1124628-1124799:1:exon
so has part: feature:1124870-1125055:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1115102-1115147:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1115412-1115469:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1116117-1116248:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1116630-1116730:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1117077-1117125:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1117856-1118034:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1119259-1119395:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1120505-1120649:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1120742-1120822:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1121424-1121489:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1121567-1121642:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1122358-1122446:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1123189-1123394:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1124628-1124799:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1124870-1125055:1:exon

CDK5RAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CDK5RAP3
product: CDK5 regulatory subunit associated protein 3, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033079283.1
SIO_010081: CDK5RAP3
subclass of: SO_0000673
so part of: CDK5RAP3
location: join(1115102..1115147,1115412..1115469,1116117..1116248,1116630..1116730,1117077..1117125,1117856..1118034,1120742..1120822,1121199..1121264,1121424..1121489,1121567..1121642,1122358..1122446,1123189..1123394,1124628..1124799,1124870..1125055)
location: region:1115102-1125055:1
so has part: feature:1115102-1115147:1:exon
so has part: feature:1115412-1115469:1:exon
so has part: feature:1116117-1116248:1:exon
so has part: feature:1116630-1116730:1:exon
so has part: feature:1117077-1117125:1:exon
so has part: feature:1117856-1118034:1:exon
so has part: feature:1120742-1120822:1:exon
so has part: feature:1121199-1121264:1:exon
so has part: feature:1121424-1121489:1:exon
so has part: feature:1121567-1121642:1:exon
so has part: feature:1122358-1122446:1:exon
so has part: feature:1123189-1123394:1:exon
so has part: feature:1124628-1124799:1:exon
so has part: feature:1124870-1125055:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1115102-1115147:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1115412-1115469:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1116117-1116248:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1116630-1116730:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1117077-1117125:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1117856-1118034:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1120742-1120822:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1121199-1121264:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1121424-1121489:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1121567-1121642:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1122358-1122446:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1123189-1123394:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1124628-1124799:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1124870-1125055:1:exon

CDK5RAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CDK5RAP3
product: CDK5 regulatory subunit associated protein 3, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033079281.1
SIO_010081: CDK5RAP3
subclass of: SO_0000673
so part of: CDK5RAP3
location: join(1115113..1115147,1115424..1115469,1116117..1116248,1116630..1116730,1117077..1117125,1117856..1118034,1119259..1119395,1120505..1120649,1120742..1120822,1121199..1121264,1121424..1121489,1121567..1121642,1122358..1122446,1123189..1123394,1124628..1124799,1124870..1125055)
location: region:1115113-1125055:1
so has part: feature:1115113-1115147:1:exon
so has part: feature:1115424-1115469:1:exon
so has part: feature:1116117-1116248:1:exon
so has part: feature:1116630-1116730:1:exon
so has part: feature:1117077-1117125:1:exon
so has part: feature:1117856-1118034:1:exon
so has part: feature:1119259-1119395:1:exon
so has part: feature:1120505-1120649:1:exon
so has part: feature:1120742-1120822:1:exon
so has part: feature:1121199-1121264:1:exon
so has part: feature:1121424-1121489:1:exon
so has part: feature:1121567-1121642:1:exon
so has part: feature:1122358-1122446:1:exon
so has part: feature:1123189-1123394:1:exon
so has part: feature:1124628-1124799:1:exon
so has part: feature:1124870-1125055:1:exon

position:1115113:1
position: 1115113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1115113-1115147:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1115424-1115469:1:exon

position:1115424:1
position: 1115424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1116117-1116248:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1116630-1116730:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1117077-1117125:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1117856-1118034:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1119259-1119395:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1120505-1120649:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1120742-1120822:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1121199-1121264:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1121424-1121489:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1121567-1121642:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1122358-1122446:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1123189-1123394:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1124628-1124799:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1124870-1125055:1:exon

CDK5RAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CDK5RAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDK5 regulatory subunit-associated protein 3 isoform X1
translation: MQVAPQDYQNVPIDIQTSKLMDWLQDRRHCGRRWQAQVQQVRERIQAALQDMPEHPEIRELLQGSFLHYFHCLRIVEILKGTEASTKNLFGRYSSQRMKDWQEIVSLYEKENAYLAELCSLLSRSVSYEAPALRRQLARGLQAQQELARREDECQVRASELRERYLGSCRQYGIAGEDVRQELLAQVQALPSLLSRVGDSASALGDAIELYQASVAFVCDSPGAAVLPLLRLVAVHGNCSVFRWRTGREPRLLQRPELRQAPEPPPEDTIDWGDFPEEPPRGGDIDWGITVEPSPQGDDGIDWGDGEKGTVTAEPSPQGDDGIDWGDGEKGTITAEPSPQGDDGIDWGDGGGQEGTITVLEAGTEAPEDVARGSDALTLLENAETRNQFLDELMELELFLAQRLLEMEDEADVVAMSQLQLAPAVLQGQSSERLRAQLATVRELLAQLCSPSVQHLCMILASPRYVERVSALLRQKLLQAELLVAKRDALAQQRRRALAEQAALEPKLQQLQDSTKELQKLIEADISKRYGGRPVNLMGINV
SIO_010081: CDK5RAP3
subclass of: SO_0000673
so part of: CDK5RAP3
location: join(1115142..1115147,1115412..1115469,1116117..1116248,1116630..1116730,1117077..1117125,1117856..1118034,1119259..1119395,1120505..1120649,1120742..1120822,1121199..1121264,1121424..1121489,1121567..1121642,1122358..1122446,1123189..1123394,1124628..1124799,1124870..1124935)
location: region:1115142-1124935:1
so has part: feature:1115142-1115147:1:exon
so has part: feature:1115412-1115469:1:exon
so has part: feature:1116117-1116248:1:exon
so has part: feature:1116630-1116730:1:exon
so has part: feature:1117077-1117125:1:exon
so has part: feature:1117856-1118034:1:exon
so has part: feature:1119259-1119395:1:exon
so has part: feature:1120505-1120649:1:exon
so has part: feature:1120742-1120822:1:exon
so has part: feature:1121199-1121264:1:exon
so has part: feature:1121424-1121489:1:exon
so has part: feature:1121567-1121642:1:exon
so has part: feature:1122358-1122446:1:exon
so has part: feature:1123189-1123394:1:exon
so has part: feature:1124628-1124799:1:exon
so has part: feature:1124870-1124935:1:exon

XP_032935170.1
type: Protein
SIO_000068: ncbiprotein

position:1115142:1
position: 1115142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1124935:1
position: 1124935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1115142-1115147:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1115412-1115469:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1116117-1116248:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1116630-1116730:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1117077-1117125:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1117856-1118034:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1119259-1119395:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1120505-1120649:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1120742-1120822:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1121199-1121264:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1121424-1121489:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1121567-1121642:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1122358-1122446:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1123189-1123394:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1124628-1124799:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1124870-1124935:1:exon

CDK5RAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CDK5RAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDK5 regulatory subunit-associated protein 3 isoform X3
translation: MQVAPQDYQNVPIDIQTSKLMDWLQDRRHCGRRWQAQVQQVRERIQAALQDMPEHPEIRELLQGSFLHYFHCLRIVEILKGTEASTKNLFGRYSSQRMKDWQEIVSLYEKENAYLAELCSLLSRSVSYEAPALRRQLARGLQAQQELARREDECQVRASELRERYLGSCRQYGIAGEDVRQELLAQVQALPSLLSRVGDSASALGDAIELYQASVAFVCDSPGAAVLPLLRLVAVHGNCSVFRWRTGREPRLLQRPELRQAPEPPPEDTIDWGDFPEEPPRGGDIDWGITVEPSPQGDDGIDWGDGEKGTITAEPSPQGDDGIDWGDGGGQEGTITVLEAGTEAPEDVARGSDALTLLENAETRNQFLDELMELELFLAQRLLEMEDEADVVAMSQLQLAPAVLQGQSSERLRAQLATVRELLAQLCSPSVQHLCMILASPRYVERVSALLRQKLLQAELLVAKRDALAQQRRRALAEQAALEPKLQQLQDSTKELQKLIEADISKRYGGRPVNLMGINV
SIO_010081: CDK5RAP3
subclass of: SO_0000673
so part of: CDK5RAP3
location: join(1115142..1115147,1115412..1115469,1116117..1116248,1116630..1116730,1117077..1117125,1117856..1118034,1119259..1119395,1120505..1120649,1120742..1120822,1121424..1121489,1121567..1121642,1122358..1122446,1123189..1123394,1124628..1124799,1124870..1124935)
location: region:1115142-1124935:1
so has part: feature:1115142-1115147:1:exon
so has part: feature:1115412-1115469:1:exon
so has part: feature:1116117-1116248:1:exon
so has part: feature:1116630-1116730:1:exon
so has part: feature:1117077-1117125:1:exon
so has part: feature:1117856-1118034:1:exon
so has part: feature:1119259-1119395:1:exon
so has part: feature:1120505-1120649:1:exon
so has part: feature:1120742-1120822:1:exon
so has part: feature:1121424-1121489:1:exon
so has part: feature:1121567-1121642:1:exon
so has part: feature:1122358-1122446:1:exon
so has part: feature:1123189-1123394:1:exon
so has part: feature:1124628-1124799:1:exon
so has part: feature:1124870-1124935:1:exon

XP_032935173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1115142-1115147:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1115412-1115469:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1116117-1116248:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1116630-1116730:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1117077-1117125:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1117856-1118034:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1119259-1119395:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1120505-1120649:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1120742-1120822:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1121424-1121489:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1121567-1121642:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1122358-1122446:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1123189-1123394:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1124628-1124799:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1124870-1124935:1:exon

CDK5RAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CDK5RAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDK5 regulatory subunit-associated protein 3 isoform X4
translation: MQVAPQDYQNVPIDIQTSKLMDWLQDRRHCGRRWQAQVQQVRERIQAALQDMPEHPEIRELLQGSFLHYFHCLRIVEILKGTEASTKNLFGRYSSQRMKDWQEIVSLYEKENAYLAELCSLLSRSVSYEAPALRRQLARGLQAQQELARREDECQVRASELRERYLGSCRQYGIAIDWGDFPEEPPRGGDIDWGITVEPSPQGDDGIDWGDGEKGTVTAEPSPQGDDGIDWGDGEKGTITAEPSPQGDDGIDWGDGGGQEGTITVLEAGTEAPEDVARGSDALTLLENAETRNQFLDELMELELFLAQRLLEMEDEADVVAMSQLQLAPAVLQGQSSERLRAQLATVRELLAQLCSPSVQHLCMILASPRYVERVSALLRQKLLQAELLVAKRDALAQQRRRALAEQAALEPKLQQLQDSTKELQKLIEADISKRYGGRPVNLMGINV
SIO_010081: CDK5RAP3
subclass of: SO_0000673
so part of: CDK5RAP3
location: join(1115142..1115147,1115412..1115469,1116117..1116248,1116630..1116730,1117077..1117125,1117856..1118034,1120742..1120822,1121199..1121264,1121424..1121489,1121567..1121642,1122358..1122446,1123189..1123394,1124628..1124799,1124870..1124935)
location: region:1115142-1124935:1
so has part: feature:1115142-1115147:1:exon
so has part: feature:1115412-1115469:1:exon
so has part: feature:1116117-1116248:1:exon
so has part: feature:1116630-1116730:1:exon
so has part: feature:1117077-1117125:1:exon
so has part: feature:1117856-1118034:1:exon
so has part: feature:1120742-1120822:1:exon
so has part: feature:1121199-1121264:1:exon
so has part: feature:1121424-1121489:1:exon
so has part: feature:1121567-1121642:1:exon
so has part: feature:1122358-1122446:1:exon
so has part: feature:1123189-1123394:1:exon
so has part: feature:1124628-1124799:1:exon
so has part: feature:1124870-1124935:1:exon

XP_032935174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1115142-1115147:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1115412-1115469:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1116117-1116248:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1116630-1116730:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1117077-1117125:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1117856-1118034:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1120742-1120822:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1121199-1121264:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1121424-1121489:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1121567-1121642:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1122358-1122446:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1123189-1123394:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1124628-1124799:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1124870-1124935:1:exon

CDK5RAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CDK5RAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDK5 regulatory subunit-associated protein 3 isoform X2
translation: MQDYQNVPIDIQTSKLMDWLQDRRHCGRRWQAQVQQVRERIQAALQDMPEHPEIRELLQGSFLHYFHCLRIVEILKGTEASTKNLFGRYSSQRMKDWQEIVSLYEKENAYLAELCSLLSRSVSYEAPALRRQLARGLQAQQELARREDECQVRASELRERYLGSCRQYGIAGEDVRQELLAQVQALPSLLSRVGDSASALGDAIELYQASVAFVCDSPGAAVLPLLRLVAVHGNCSVFRWRTGREPRLLQRPELRQAPEPPPEDTIDWGDFPEEPPRGGDIDWGITVEPSPQGDDGIDWGDGEKGTVTAEPSPQGDDGIDWGDGEKGTITAEPSPQGDDGIDWGDGGGQEGTITVLEAGTEAPEDVARGSDALTLLENAETRNQFLDELMELELFLAQRLLEMEDEADVVAMSQLQLAPAVLQGQSSERLRAQLATVRELLAQLCSPSVQHLCMILASPRYVERVSALLRQKLLQAELLVAKRDALAQQRRRALAEQAALEPKLQQLQDSTKELQKLIEADISKRYGGRPVNLMGINV
SIO_010081: CDK5RAP3
subclass of: SO_0000673
so part of: CDK5RAP3
location: join(1115142..1115147,1115424..1115469,1116117..1116248,1116630..1116730,1117077..1117125,1117856..1118034,1119259..1119395,1120505..1120649,1120742..1120822,1121199..1121264,1121424..1121489,1121567..1121642,1122358..1122446,1123189..1123394,1124628..1124799,1124870..1124935)
location: region:1115142-1124935:1
so has part: feature:1115142-1115147:1:exon
so has part: feature:1115424-1115469:1:exon
so has part: feature:1116117-1116248:1:exon
so has part: feature:1116630-1116730:1:exon
so has part: feature:1117077-1117125:1:exon
so has part: feature:1117856-1118034:1:exon
so has part: feature:1119259-1119395:1:exon
so has part: feature:1120505-1120649:1:exon
so has part: feature:1120742-1120822:1:exon
so has part: feature:1121199-1121264:1:exon
so has part: feature:1121424-1121489:1:exon
so has part: feature:1121567-1121642:1:exon
so has part: feature:1122358-1122446:1:exon
so has part: feature:1123189-1123394:1:exon
so has part: feature:1124628-1124799:1:exon
so has part: feature:1124870-1124935:1:exon

XP_032935172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1115142-1115147:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1115424-1115469:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1116117-1116248:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1116630-1116730:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1117077-1117125:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1117856-1118034:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1119259-1119395:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1120505-1120649:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1120742-1120822:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1121199-1121264:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1121424-1121489:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1121567-1121642:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1122358-1122446:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1123189-1123394:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1124628-1124799:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1124870-1124935:1:exon

TRNAC-GCA
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: TRNAC-GCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1128029..1128100)
location: region:1128029-1128100:-1
so has part: feature:1128029-1128100:-1:exon
subclass of: SO_0000663

117006723
type: Gene
SIO_000068: ncbigene

position:1128029:-1
position: 1128029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1128100:-1
position: 1128100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1128029-1128100:-1:exon

TRNAC-GCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 91951
gene: TRNAC-GCA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1128066..1128068),aa:Cys, seq:gca)
SIO_010081: TRNAC-GCA
subclass of: SO_0000673
so part of: TRNAC-GCA
location: complement(1128029..1128100)
location: region:1128029-1128100:-1
so has part: feature:1128029-1128100:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1128029-1128100:-1:exon

TRNAC-GCA
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: TRNAC-GCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1129921..1129992)
location: region:1129921-1129992:-1
so has part: feature:1129921-1129992:-1:exon
subclass of: SO_0000663

117006724
type: Gene
SIO_000068: ncbigene

position:1129921:-1
position: 1129921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1129992:-1
position: 1129992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1129921-1129992:-1:exon

TRNAC-GCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 91951
gene: TRNAC-GCA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1129958..1129960),aa:Cys, seq:gca)
SIO_010081: TRNAC-GCA
subclass of: SO_0000673
so part of: TRNAC-GCA
location: complement(1129921..1129992)
location: region:1129921-1129992:-1
so has part: feature:1129921-1129992:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1129921-1129992:-1:exon

RPL23
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: RPL23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1131523..1138312)
location: region:1131523-1138312:-1
so has part: feature:1131523-1138312:-1:exon
subclass of: SO_0000010

117006424
type: Gene
SIO_000068: ncbigene

position:1131523:-1
position: 1131523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1138312:-1
position: 1138312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1131523-1138312:-1:exon

RPL23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: RPL23
product: ribosomal protein L23
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033078875.2
SIO_010081: RPL23
subclass of: SO_0000673
so part of: RPL23
location: complement(join(1131523..1131643,1132565..1132678,1135056..1135184,1137929..1138012,1138222..1138312))
location: region:1131523-1138312:-1
so has part: feature:1138222-1138312:-1:exon
so has part: feature:1137929-1138012:-1:exon
so has part: feature:1135056-1135184:-1:exon
so has part: feature:1132565-1132678:-1:exon
so has part: feature:1131523-1131643:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1138222-1138312:-1:exon

position:1138222:-1
position: 1138222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1137929-1138012:-1:exon

position:1137929:-1
position: 1137929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1138012:-1
position: 1138012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1135056-1135184:-1:exon

position:1135056:-1
position: 1135056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1135184:-1
position: 1135184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1132565-1132678:-1:exon

position:1132565:-1
position: 1132565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1132678:-1
position: 1132678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1131523-1131643:-1:exon

position:1131643:-1
position: 1131643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPL23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: RPL23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L23
translation: MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSIA
SIO_010081: RPL23
subclass of: SO_0000673
so part of: RPL23
location: complement(join(1131561..1131643,1132565..1132678,1135056..1135184,1137929..1138012,1138222..1138234))
location: region:1131561-1138234:-1
so has part: feature:1138222-1138234:-1:exon
so has part: feature:1137929-1138012:-1:exon
so has part: feature:1135056-1135184:-1:exon
so has part: feature:1132565-1132678:-1:exon
so has part: feature:1131561-1131643:-1:exon

XP_032934766.1
type: Protein
SIO_000068: ncbiprotein

position:1131561:-1
position: 1131561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1138234:-1
position: 1138234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1138222-1138234:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1137929-1138012:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1135056-1135184:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1132565-1132678:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1131561-1131643:-1:exon

LOC117006714
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117006714
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1134862..1134993)
location: region:1134862-1134993:-1
so has part: feature:1134862-1134993:-1:exon
subclass of: SO_0000578

117006714
type: Gene
SIO_000068: ncbigene

position:1134862:-1
position: 1134862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1134993:-1
position: 1134993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1134862-1134993:-1:exon

LOC117006714
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: snoRNA
gene: LOC117006714
product: small nucleolar RNA SNORA21
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00412
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004420014.1
SIO_010081: LOC117006714
subclass of: SO_0000673
so part of: LOC117006714
location: complement(1134862..1134993)
location: region:1134862-1134993:-1
so has part: feature:1134862-1134993:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1134862-1134993:-1:exon

TRNAC-GCA
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: TRNAC-GCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1138526..1138597)
location: region:1138526-1138597:-1
so has part: feature:1138526-1138597:-1:exon
subclass of: SO_0000663

117006725
type: Gene
SIO_000068: ncbigene

position:1138526:-1
position: 1138526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1138597:-1
position: 1138597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1138526-1138597:-1:exon

TRNAC-GCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 91951
gene: TRNAC-GCA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1138563..1138565),aa:Cys, seq:gca)
SIO_010081: TRNAC-GCA
subclass of: SO_0000673
so part of: TRNAC-GCA
location: complement(1138526..1138597)
location: region:1138526-1138597:-1
so has part: feature:1138526-1138597:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1138526-1138597:-1:exon

TRNAC-GCA
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: TRNAC-GCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1138777..1138848)
location: region:1138777-1138848:-1
so has part: feature:1138777-1138848:-1:exon
subclass of: SO_0000663

117006727
type: Gene
SIO_000068: ncbigene

position:1138777:-1
position: 1138777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1138848:-1
position: 1138848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1138777-1138848:-1:exon

TRNAC-GCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 91951
gene: TRNAC-GCA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1138814..1138816),aa:Cys, seq:gca)
SIO_010081: TRNAC-GCA
subclass of: SO_0000673
so part of: TRNAC-GCA
location: complement(1138777..1138848)
location: region:1138777-1138848:-1
so has part: feature:1138777-1138848:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1138777-1138848:-1:exon

LASP1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LASP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1139078..1184381
location: region:1139078-1184381:1
so has part: feature:1139078-1184381:1:exon
subclass of: SO_0000010

117006596
type: Gene
SIO_000068: ncbigene

position:1139078:1
position: 1139078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1184381:1
position: 1184381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1139078-1184381:1:exon

LASP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LASP1
product: LIM and SH3 protein 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033079127.2
SIO_010081: LASP1
subclass of: SO_0000673
so part of: LASP1
location: join(1139078..1139285,1151329..1151423,1169101..1169185,1174177..1174293,1178724..1178877,1181026..1181114,1183738..1184381)
location: region:1139078-1184381:1
so has part: feature:1139078-1139285:1:exon
so has part: feature:1151329-1151423:1:exon
so has part: feature:1169101-1169185:1:exon
so has part: feature:1174177-1174293:1:exon
so has part: feature:1178724-1178877:1:exon
so has part: feature:1181026-1181114:1:exon
so has part: feature:1183738-1184381:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1139078-1139285:1:exon

position:1139285:1
position: 1139285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1151329-1151423:1:exon

position:1151329:1
position: 1151329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1151423:1
position: 1151423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1169101-1169185:1:exon

position:1169101:1
position: 1169101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1169185:1
position: 1169185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1174177-1174293:1:exon

position:1174177:1
position: 1174177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1174293:1
position: 1174293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1178724-1178877:1:exon

position:1178724:1
position: 1178724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1178877:1
position: 1178877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1181026-1181114:1:exon

position:1181026:1
position: 1181026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1181114:1
position: 1181114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1183738-1184381:1:exon

position:1183738:1
position: 1183738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LASP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LASP1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: LIM and SH3 domain protein 1
translation: MNPNCARCGKIVYPTEKVNCLDKFWHKSCFHCETCKMTLNMKNYKGYDKKPYCNAHYPKQSFTMVADTPENLRLKQQSELQSQIRYKEEFEKNKGQRFQRGGDTPELQRIRKTQDQIQQRECIKYHEEFERSRMGPSPSEGSEPERRGSPESGGYRRAEPQQQQQQLGQPGATVYQQPPSQSYGYKEPAAPASAPRNAPPGGGKRFRAVYDYNAADEDEVSFQDGDTIINVQQIDDGWMYGTVERTGDTGMLPANYVEAI
SIO_010081: LASP1
subclass of: SO_0000673
so part of: LASP1
location: join(1139217..1139285,1151329..1151423,1169101..1169185,1174177..1174293,1178724..1178877,1181026..1181114,1183738..1183912)
location: region:1139217-1183912:1
so has part: feature:1139217-1139285:1:exon
so has part: feature:1151329-1151423:1:exon
so has part: feature:1169101-1169185:1:exon
so has part: feature:1174177-1174293:1:exon
so has part: feature:1178724-1178877:1:exon
so has part: feature:1181026-1181114:1:exon
so has part: feature:1183738-1183912:1:exon

XP_032935018.1
type: Protein
SIO_000068: ncbiprotein

position:1139217:1
position: 1139217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1183912:1
position: 1183912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1139217-1139285:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1151329-1151423:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1169101-1169185:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1174177-1174293:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1178724-1178877:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1181026-1181114:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1183738-1183912:1:exon

LOC117006597
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117006597
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1190264..1192433
location: region:1190264-1192433:1
so has part: feature:1190264-1192433:1:exon
subclass of: SO_0000011

117006597
type: Gene
SIO_000068: ncbigene

position:1190264:1
position: 1190264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1192433:1
position: 1192433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1190264-1192433:1:exon

LOC117006597
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117006597
product: uncharacterized LOC117006597
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_004420009.2
SIO_010081: LOC117006597
subclass of: SO_0000673
so part of: LOC117006597
location: join(1190264..1190601,1191662..1192433)
location: region:1190264-1192433:1
so has part: feature:1190264-1190601:1:exon
so has part: feature:1191662-1192433:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1190264-1190601:1:exon

position:1190601:1
position: 1190601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1191662-1192433:1:exon

position:1191662:1
position: 1191662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FBXO47
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: FBXO47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1195692..1211728)
location: region:1195692-1211728:-1
so has part: feature:1195692-1211728:-1:exon
subclass of: SO_0000010

117006322
type: Gene
SIO_000068: ncbigene

position:1195692:-1
position: 1195692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1211728:-1
position: 1211728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1195692-1211728:-1:exon

FBXO47
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: FBXO47
product: F-box protein 47
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033078696.1
SIO_010081: FBXO47
subclass of: SO_0000673
so part of: FBXO47
location: complement(join(1195692..1196050,1197723..1197882,1199184..1199326,1199610..1199756,1200661..1200834,1205026..1205134,1207499..1207576,1207772..1207848,1209226..1209402,1210843..1211728))
location: region:1195692-1211728:-1
so has part: feature:1210843-1211728:-1:exon
so has part: feature:1209226-1209402:-1:exon
so has part: feature:1207772-1207848:-1:exon
so has part: feature:1207499-1207576:-1:exon
so has part: feature:1205026-1205134:-1:exon
so has part: feature:1200661-1200834:-1:exon
so has part: feature:1199610-1199756:-1:exon
so has part: feature:1199184-1199326:-1:exon
so has part: feature:1197723-1197882:-1:exon
so has part: feature:1195692-1196050:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1210843-1211728:-1:exon

position:1210843:-1
position: 1210843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1209226-1209402:-1:exon

position:1209226:-1
position: 1209226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1209402:-1
position: 1209402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1207772-1207848:-1:exon

position:1207772:-1
position: 1207772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207848:-1
position: 1207848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1207499-1207576:-1:exon

position:1207499:-1
position: 1207499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207576:-1
position: 1207576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1205026-1205134:-1:exon

position:1205026:-1
position: 1205026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205134:-1
position: 1205134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1200661-1200834:-1:exon

position:1200661:-1
position: 1200661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1200834:-1
position: 1200834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1199610-1199756:-1:exon

position:1199610:-1
position: 1199610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1199756:-1
position: 1199756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1199184-1199326:-1:exon

position:1199184:-1
position: 1199184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1199326:-1
position: 1199326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1197723-1197882:-1:exon

position:1197723:-1
position: 1197723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1197882:-1
position: 1197882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1195692-1196050:-1:exon

position:1196050:-1
position: 1196050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FBXO47
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: FBXO47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 47
translation: MTSSCTSISRQKQRRRSRRGRASSRDSPAQSALGDFQILPLEIFQMVLNYLSVKDISMLSMVSKSISGRLINYICTSSGSRRLLLQDFHSPELPARTEGASTSILEHYRSLGLLLKRCTLLLPTRDRLKYVHKVLSGVSCFKLSGCASPLHCLGLQCYGVFLQILTAGWDELECHRVFNFLWELGSLARKVQTVLSSKPGSARRLELRIRLFCRAVLLSGSRRGDSAFWLTRILKPWPMVNQARLLYIIFGPVSSRDGHVVWQKMIEGPTDESSLKGLADAIKLLYGTEAREWTADDVISLVDELSVVPQEWLMENNARLLLLSGNSICFTFLASKAVNGRAVELARLMVFMVLVCEKDLYCMDWAVKMMQKVCKVFSTPWERNNFLQCLENAFARMLMDLLQAVLAGERDEEDSSFLNLFHLMNAQANFHKEILYLAMGSSSSSSSSS
SIO_010081: FBXO47
subclass of: SO_0000673
so part of: FBXO47
location: complement(join(1195923..1196050,1197723..1197882,1199184..1199326,1199610..1199756,1200661..1200834,1205026..1205134,1207499..1207576,1207772..1207848,1209226..1209402,1210843..1210999))
location: region:1195923-1210999:-1
so has part: feature:1210843-1210999:-1:exon
so has part: feature:1209226-1209402:-1:exon
so has part: feature:1207772-1207848:-1:exon
so has part: feature:1207499-1207576:-1:exon
so has part: feature:1205026-1205134:-1:exon
so has part: feature:1200661-1200834:-1:exon
so has part: feature:1199610-1199756:-1:exon
so has part: feature:1199184-1199326:-1:exon
so has part: feature:1197723-1197882:-1:exon
so has part: feature:1195923-1196050:-1:exon

XP_032934587.1
type: Protein
SIO_000068: ncbiprotein

position:1195923:-1
position: 1195923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1210999:-1
position: 1210999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1210843-1210999:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1209226-1209402:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1207772-1207848:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1207499-1207576:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1205026-1205134:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1200661-1200834:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1199610-1199756:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1199184-1199326:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1197723-1197882:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1195923-1196050:-1:exon

PLXDC1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: PLXDC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1221422..1252478)
location: region:1221422-1252478:-1
so has part: feature:1221422-1252478:-1:exon
subclass of: SO_0000010

117006442
type: Gene
SIO_000068: ncbigene

position:1221422:-1
position: 1221422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1252478:-1
position: 1252478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1221422-1252478:-1:exon

PLXDC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PLXDC1
product: plexin domain containing 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033078902.1
SIO_010081: PLXDC1
subclass of: SO_0000673
so part of: PLXDC1
location: complement(join(1221422..1222634,1224265..1224419,1226347..1226379,1230733..1230835,1231457..1231514,1235669..1235750,1239685..1239780,1241174..1241273,1242538..1242656,1243547..1243669,1245063..1245132,1245839..1245982,1251130..1251245,1252326..1252478))
location: region:1221422-1252478:-1
so has part: feature:1252326-1252478:-1:exon
so has part: feature:1251130-1251245:-1:exon
so has part: feature:1245839-1245982:-1:exon
so has part: feature:1245063-1245132:-1:exon
so has part: feature:1243547-1243669:-1:exon
so has part: feature:1242538-1242656:-1:exon
so has part: feature:1241174-1241273:-1:exon
so has part: feature:1239685-1239780:-1:exon
so has part: feature:1235669-1235750:-1:exon
so has part: feature:1231457-1231514:-1:exon
so has part: feature:1230733-1230835:-1:exon
so has part: feature:1226347-1226379:-1:exon
so has part: feature:1224265-1224419:-1:exon
so has part: feature:1221422-1222634:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1252326-1252478:-1:exon

position:1252326:-1
position: 1252326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1251130-1251245:-1:exon

position:1251130:-1
position: 1251130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1251245:-1
position: 1251245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1245839-1245982:-1:exon

position:1245839:-1
position: 1245839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1245982:-1
position: 1245982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1245063-1245132:-1:exon

position:1245063:-1
position: 1245063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1245132:-1
position: 1245132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1243547-1243669:-1:exon

position:1243547:-1
position: 1243547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1243669:-1
position: 1243669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1242538-1242656:-1:exon

position:1242538:-1
position: 1242538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1242656:-1
position: 1242656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1241174-1241273:-1:exon

position:1241174:-1
position: 1241174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1241273:-1
position: 1241273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1239685-1239780:-1:exon

position:1239685:-1
position: 1239685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1239780:-1
position: 1239780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1235669-1235750:-1:exon

position:1235669:-1
position: 1235669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1235750:-1
position: 1235750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1231457-1231514:-1:exon

position:1231457:-1
position: 1231457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1231514:-1
position: 1231514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1230733-1230835:-1:exon

position:1230733:-1
position: 1230733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1230835:-1
position: 1230835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1226347-1226379:-1:exon

position:1226347:-1
position: 1226347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1226379:-1
position: 1226379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1224265-1224419:-1:exon

position:1224265:-1
position: 1224265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1224419:-1
position: 1224419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1221422-1222634:-1:exon

position:1222634:-1
position: 1222634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLXDC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PLXDC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plexin domain-containing protein 1
translation: MFGGGLLLLCLLRGALGAGRPPGSEAGDTTEGTRISQDLGGGSLAIDTLPANGTRVVEDNHSYYVSRIYGPGDARGRGLWLELAAASGNQAKIHGILSNTHRQASRIVLSFDFPFYGHPLRQVTIATGGFIFVGDVIHRMLTATQYIAPLMANFNPSYSPNSTVQYLDNGTVFVVQWDQVYLQGKEDLGSFTFQAALHRSGRIVFGYKEVPVPVQQIGGSQHPVKAGLSDAFLVLNPNPDVPESRRRTIYEYHRVELDTSSITSLSAVEFTPLPTCLQHQSCEMCESSGLSFNCSWCHVLQRCSSGFDRHREEWLSYGCAQPDHRTCADLADVDASPAPPGVPSPTGSLVLGSTEDDTKLKQFAAEGTGSSLPSRGTPVPTGTVVAVVVAVLFLAGLILAGIYISGHPTSAAALFFLERRPLRWPAMKFRNHPNHASYAEVEAASQEKEGFVEAEQC
SIO_010081: PLXDC1
subclass of: SO_0000673
so part of: PLXDC1
location: complement(join(1222515..1222634,1224265..1224419,1226347..1226379,1230733..1230835,1231457..1231514,1235669..1235750,1239685..1239780,1241174..1241273,1242538..1242656,1243547..1243669,1245063..1245132,1245839..1245982,1251130..1251245,1252326..1252380))
location: region:1222515-1252380:-1
so has part: feature:1252326-1252380:-1:exon
so has part: feature:1251130-1251245:-1:exon
so has part: feature:1245839-1245982:-1:exon
so has part: feature:1245063-1245132:-1:exon
so has part: feature:1243547-1243669:-1:exon
so has part: feature:1242538-1242656:-1:exon
so has part: feature:1241174-1241273:-1:exon
so has part: feature:1239685-1239780:-1:exon
so has part: feature:1235669-1235750:-1:exon
so has part: feature:1231457-1231514:-1:exon
so has part: feature:1230733-1230835:-1:exon
so has part: feature:1226347-1226379:-1:exon
so has part: feature:1224265-1224419:-1:exon
so has part: feature:1222515-1222634:-1:exon

XP_032934793.1
type: Protein
SIO_000068: ncbiprotein

position:1222515:-1
position: 1222515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1252380:-1
position: 1252380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1252326-1252380:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1251130-1251245:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1245839-1245982:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1245063-1245132:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1243547-1243669:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1242538-1242656:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1241174-1241273:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1239685-1239780:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1235669-1235750:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1231457-1231514:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1230733-1230835:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1226347-1226379:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1224265-1224419:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1222515-1222634:-1:exon

TRNAC-GCA
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: TRNAC-GCA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1254128..1254199)
location: region:1254128-1254199:-1
so has part: feature:1254128-1254199:-1:exon
subclass of: SO_0000663

117006728
type: Gene
SIO_000068: ncbigene

position:1254128:-1
position: 1254128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1254199:-1
position: 1254199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1254128-1254199:-1:exon

TRNAC-GCA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 91951
gene: TRNAC-GCA
product: tRNA-Cys
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA cysteine (anticodon GCA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1254165..1254167),aa:Cys, seq:gca)
SIO_010081: TRNAC-GCA
subclass of: SO_0000673
so part of: TRNAC-GCA
location: complement(1254128..1254199)
location: region:1254128-1254199:-1
so has part: feature:1254128-1254199:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1254128-1254199:-1:exon

LOC117006256
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117006256
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1259703..1262825
location: region:1259703-1262825:1
so has part: feature:1259703-1262825:1:exon
subclass of: SO_0000010

117006256
type: Gene
SIO_000068: ncbigene

position:1259703:1
position: 1259703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1262825:1
position: 1262825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1259703-1262825:1:exon

LOC117006256
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117006256
product: dickkopf-related protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 59% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033078632.1
SIO_010081: LOC117006256
subclass of: SO_0000673
so part of: LOC117006256
location: join(1259703..1259849,1262170..1262347,1262456..1262651,1262771..1262825)
location: region:1259703-1262825:1
so has part: feature:1259703-1259849:1:exon
so has part: feature:1262170-1262347:1:exon
so has part: feature:1262456-1262651:1:exon
so has part: feature:1262771-1262825:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1259703-1259849:1:exon

position:1259849:1
position: 1259849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1262170-1262347:1:exon

position:1262170:1
position: 1262170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1262347:1
position: 1262347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1262456-1262651:1:exon

position:1262456:1
position: 1262456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1262651:1
position: 1262651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1262771-1262825:1:exon

position:1262771:1
position: 1262771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117006256
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117006256
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dickkopf-related protein 3-like
translation: MVTSTAILCLVAWLLPPATGHLWAWMFSLPQNSPDAAALGRRSGGELEEVTPCSPATPCAQDHFCDEHFGLCLPARPAGHYCRHDPHCAHGLVCMFGKCQQPVPPGQDGARCQRDEECGAGGCCARQHGERVCQRRLALSQSCHVPPGGLAFSINQVCPCQAGLVCRPSVPARQKEFEYRPEKSEWRCRQP
SIO_010081: LOC117006256
subclass of: SO_0000673
so part of: LOC117006256
location: join(1259703..1259849,1262170..1262347,1262456..1262651,1262771..1262825)
location: region:1259703-1262825:1
so has part: feature:1259703-1259849:1:exon
so has part: feature:1262170-1262347:1:exon
so has part: feature:1262456-1262651:1:exon
so has part: feature:1262771-1262825:1:exon

XP_032934523.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1259703-1259849:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1262170-1262347:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1262456-1262651:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1262771-1262825:1:exon

TRNAI-UAU
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: TRNAI-UAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1261904..1261993
location: region:1261904-1261993:1
so has part: feature:1261904-1261993:1:exon
subclass of: SO_0000663

117006720
type: Gene
SIO_000068: ncbigene

position:1261904:1
position: 1261904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1261993:1
position: 1261993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1261904-1261993:1:exon

TRNAI-UAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 91951
gene: TRNAI-UAU
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA isoleucine (anticodon UAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1261938..1261940,aa:Ile,seq:tat)
SIO_010081: TRNAI-UAU
subclass of: SO_0000673
so part of: TRNAI-UAU
location: join(1261904..1261941,1261958..1261993)
location: region:1261904-1261993:1
so has part: feature:1261904-1261941:1:exon
so has part: feature:1261958-1261993:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1261904-1261941:1:exon

position:1261941:1
position: 1261941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1261958-1261993:1:exon

position:1261958:1
position: 1261958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CACNB1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: CACNB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1263208..1282958)
location: region:1263208-1282958:-1
so has part: feature:1263208-1282958:-1:exon
subclass of: SO_0000010

117006612
type: Gene
SIO_000068: ncbigene

position:1263208:-1
position: 1263208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1282958:-1
position: 1282958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1263208-1282958:-1:exon

CACNB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CACNB1
product: calcium voltage-gated channel auxiliary subunit beta 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033079147.2
SIO_010081: CACNB1
subclass of: SO_0000673
so part of: CACNB1
location: complement(join(1263208..1265044,1266699..1266884,1267911..1268006,1268085..1268236,1268699..1268808,1271035..1271093,1271211..1271291,1271434..1271453,1276181..1276257,1276334..1276470,1276550..1276672,1279628..1279747,1281141..1281227,1282674..1282954))
location: region:1263208-1282954:-1
so has part: feature:1282674-1282954:-1:exon
so has part: feature:1281141-1281227:-1:exon
so has part: feature:1279628-1279747:-1:exon
so has part: feature:1276550-1276672:-1:exon
so has part: feature:1276334-1276470:-1:exon
so has part: feature:1276181-1276257:-1:exon
so has part: feature:1271434-1271453:-1:exon
so has part: feature:1271211-1271291:-1:exon
so has part: feature:1271035-1271093:-1:exon
so has part: feature:1268699-1268808:-1:exon
so has part: feature:1268085-1268236:-1:exon
so has part: feature:1267911-1268006:-1:exon
so has part: feature:1266699-1266884:-1:exon
so has part: feature:1263208-1265044:-1:exon

position:1282954:-1
position: 1282954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1282674-1282954:-1:exon

position:1282674:-1
position: 1282674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1281141-1281227:-1:exon

position:1281141:-1
position: 1281141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1281227:-1
position: 1281227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1279628-1279747:-1:exon

position:1279628:-1
position: 1279628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1279747:-1
position: 1279747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1276550-1276672:-1:exon

position:1276550:-1
position: 1276550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1276672:-1
position: 1276672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1276334-1276470:-1:exon

position:1276334:-1
position: 1276334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1276470:-1
position: 1276470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1276181-1276257:-1:exon

position:1276181:-1
position: 1276181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1276257:-1
position: 1276257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1271434-1271453:-1:exon

position:1271434:-1
position: 1271434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1271453:-1
position: 1271453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1271211-1271291:-1:exon

position:1271211:-1
position: 1271211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1271291:-1
position: 1271291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1271035-1271093:-1:exon

position:1271035:-1
position: 1271035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1271093:-1
position: 1271093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1268699-1268808:-1:exon

position:1268699:-1
position: 1268699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1268808:-1
position: 1268808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1268085-1268236:-1:exon

position:1268085:-1
position: 1268085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1268236:-1
position: 1268236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1267911-1268006:-1:exon

position:1267911:-1
position: 1267911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1268006:-1
position: 1268006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1266699-1266884:-1:exon

position:1266699:-1
position: 1266699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1266884:-1
position: 1266884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1263208-1265044:-1:exon

position:1265044:-1
position: 1265044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CACNB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CACNB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent L-type calcium channel subunit beta-1 isoform X1
translation: MVREGGMARTPYSSTQDIQMDVLDNAALQGKYSRRKSRFKRSDGSTSSDTTSNSFVRQGSAESYTSRPSDSDVSLEEDREALRKEAERQAMAQLEKAKTKPVAFAVRTNVGYNPSATDDVPVQGMAICFEPKDFLHIKEKYNNDWWIGRLVKEGCEVGFIPSPVKLENMRLLQEQKMRQNRLSSSKSGDNSSASLGDVVTGTRRPTPPASAKQKQKSTEHVPPYDVVPSMRPIILVGPSLKGYEVTDMMQKALFDFLKHRFDGRISITRVTADISLAKRSVLNNPSKHTIIERSSTRSSLAEVQSETERIFELARTLQLVALDADTINHPAQLAKTSLAPIIVYIKITSPKVLQRLVKSRGKSQAKHLNVQMVASDKLAQCPPEMFDIVLDENQLEEACEHLAEYLEAYWKATHPPSSNPPNPLLNRTMATAALAASPAPVSNLQAPFPEGEHGHLRHSSGDSGGRGQGRATLPPTRPGPRSLARQDTFDTEAPGSREQAGTELGDSCCMDIEMDPVEEEPPGTPGDGAQPGLRGQSDGEGWGRDVYTR
SIO_010081: CACNB1
subclass of: SO_0000673
so part of: CACNB1
location: complement(join(1264730..1265044,1266699..1266884,1267911..1268006,1268085..1268236,1268699..1268808,1271035..1271093,1271211..1271291,1271434..1271453,1276181..1276257,1276334..1276470,1276550..1276672,1279628..1279747,1281141..1281227,1282674..1282760))
location: region:1264730-1282760:-1
so has part: feature:1282674-1282760:-1:exon
so has part: feature:1281141-1281227:-1:exon
so has part: feature:1279628-1279747:-1:exon
so has part: feature:1276550-1276672:-1:exon
so has part: feature:1276334-1276470:-1:exon
so has part: feature:1276181-1276257:-1:exon
so has part: feature:1271434-1271453:-1:exon
so has part: feature:1271211-1271291:-1:exon
so has part: feature:1271035-1271093:-1:exon
so has part: feature:1268699-1268808:-1:exon
so has part: feature:1268085-1268236:-1:exon
so has part: feature:1267911-1268006:-1:exon
so has part: feature:1266699-1266884:-1:exon
so has part: feature:1264730-1265044:-1:exon

XP_032935038.1
type: Protein
SIO_000068: ncbiprotein

position:1264730:-1
position: 1264730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1282760:-1
position: 1282760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1282674-1282760:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1281141-1281227:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1279628-1279747:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1276550-1276672:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1276334-1276470:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1276181-1276257:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1271434-1271453:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1271211-1271291:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1271035-1271093:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1268699-1268808:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1268085-1268236:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1267911-1268006:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1266699-1266884:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1264730-1265044:-1:exon

CACNB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CACNB1
product: calcium voltage-gated channel auxiliary subunit beta 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 7 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033079148.2
SIO_010081: CACNB1
subclass of: SO_0000673
so part of: CACNB1
location: complement(join(1266476..1266884,1267911..1268006,1268085..1268236,1268699..1268808,1271035..1271093,1271211..1271291,1274256..1274404,1276181..1276257,1276334..1276470,1276550..1276672,1279628..1279747,1281141..1281227,1282674..1282958))
location: region:1266476-1282958:-1
so has part: feature:1282674-1282958:-1:exon
so has part: feature:1281141-1281227:-1:exon
so has part: feature:1279628-1279747:-1:exon
so has part: feature:1276550-1276672:-1:exon
so has part: feature:1276334-1276470:-1:exon
so has part: feature:1276181-1276257:-1:exon
so has part: feature:1274256-1274404:-1:exon
so has part: feature:1271211-1271291:-1:exon
so has part: feature:1271035-1271093:-1:exon
so has part: feature:1268699-1268808:-1:exon
so has part: feature:1268085-1268236:-1:exon
so has part: feature:1267911-1268006:-1:exon
so has part: feature:1266476-1266884:-1:exon

position:1266476:-1
position: 1266476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1282674-1282958:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1281141-1281227:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1279628-1279747:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1276550-1276672:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1276334-1276470:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1276181-1276257:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1274256-1274404:-1:exon

position:1274256:-1
position: 1274256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1274404:-1
position: 1274404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1271211-1271291:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1271035-1271093:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1268699-1268808:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1268085-1268236:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1267911-1268006:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1266476-1266884:-1:exon

CACNB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CACNB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent L-type calcium channel subunit beta-1 isoform X2
translation: MVREGGMARTPYSSTQDIQMDVLDNAALQGKYSRRKSRFKRSDGSTSSDTTSNSFVRQGSAESYTSRPSDSDVSLEEDREALRKEAERQAMAQLEKAKTKPVAFAVRTNVGYNPSATDDVPVQGMAICFEPKDFLHIKEKYNNDWWIGRLVKEGCEVGFIPSPVKLENMRLLQEQKMRQNRLSSSKSGDNSSASLGDVVTGTRRPTPPASGGLEVPSFAFDPDELEEEEEALEAQRSPKSSVSSVTTPPAHNKRIPFFRKTEHVPPYDVVPSMRPIILVGPSLKGYEVTDMMQKALFDFLKHRFDGRISITRVTADISLAKRSVLNNPSKHTIIERSSTRSSLAEVQSETERIFELARTLQLVALDADTINHPAQLAKTSLAPIIVYIKITSPKVLQRLVKSRGKSQAKHLNVQMVASDKLAQCPPEMFDIVLDENQLEEACEHLAEYLEAYWKATHPPSSNPPNPLLNRTMATAALAASPAPVSNLQVQVLTSLRRNLSLWGREATPSPPGALEEHAL
SIO_010081: CACNB1
subclass of: SO_0000673
so part of: CACNB1
location: complement(join(1266603..1266884,1267911..1268006,1268085..1268236,1268699..1268808,1271035..1271093,1271211..1271291,1274256..1274404,1276181..1276257,1276334..1276470,1276550..1276672,1279628..1279747,1281141..1281227,1282674..1282760))
location: region:1266603-1282760:-1
so has part: feature:1282674-1282760:-1:exon
so has part: feature:1281141-1281227:-1:exon
so has part: feature:1279628-1279747:-1:exon
so has part: feature:1276550-1276672:-1:exon
so has part: feature:1276334-1276470:-1:exon
so has part: feature:1276181-1276257:-1:exon
so has part: feature:1274256-1274404:-1:exon
so has part: feature:1271211-1271291:-1:exon
so has part: feature:1271035-1271093:-1:exon
so has part: feature:1268699-1268808:-1:exon
so has part: feature:1268085-1268236:-1:exon
so has part: feature:1267911-1268006:-1:exon
so has part: feature:1266603-1266884:-1:exon

XP_032935039.1
type: Protein
SIO_000068: ncbiprotein

position:1266603:-1
position: 1266603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1282674-1282760:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1281141-1281227:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1279628-1279747:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1276550-1276672:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1276334-1276470:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1276181-1276257:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1274256-1274404:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1271211-1271291:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1271035-1271093:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1268699-1268808:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1268085-1268236:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1267911-1268006:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1266603-1266884:-1:exon

RPL19
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: RPL19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1288769..1295940
location: region:1288769-1295940:1
so has part: feature:1288769-1295940:1:exon
subclass of: SO_0000010

117006678
type: Gene
SIO_000068: ncbigene

position:1288769:1
position: 1288769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1295940:1
position: 1295940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1288769-1295940:1:exon

RPL19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: RPL19
product: ribosomal protein L19
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033079234.2
SIO_010081: RPL19
subclass of: SO_0000673
so part of: RPL19
location: join(1288769..1288830,1289890..1289996,1290256..1290378,1292834..1292954,1293666..1293776,1295762..1295940)
location: region:1288769-1295940:1
so has part: feature:1288769-1288830:1:exon
so has part: feature:1289890-1289996:1:exon
so has part: feature:1290256-1290378:1:exon
so has part: feature:1292834-1292954:1:exon
so has part: feature:1293666-1293776:1:exon
so has part: feature:1295762-1295940:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288769-1288830:1:exon

position:1288830:1
position: 1288830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1289890-1289996:1:exon

position:1289890:1
position: 1289890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1289996:1
position: 1289996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1290256-1290378:1:exon

position:1290256:1
position: 1290256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1290378:1
position: 1290378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1292834-1292954:1:exon

position:1292834:1
position: 1292834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1292954:1
position: 1292954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1293666-1293776:1:exon

position:1293666:1
position: 1293666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1293776:1
position: 1293776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1295762-1295940:1:exon

position:1295762:1
position: 1295762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPL19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: RPL19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L19
translation: MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSKEEEAKK
SIO_010081: RPL19
subclass of: SO_0000673
so part of: RPL19
location: join(1288826..1288830,1289890..1289996,1290256..1290378,1292834..1292954,1293666..1293776,1295762..1295885)
location: region:1288826-1295885:1
so has part: feature:1288826-1288830:1:exon
so has part: feature:1289890-1289996:1:exon
so has part: feature:1290256-1290378:1:exon
so has part: feature:1292834-1292954:1:exon
so has part: feature:1293666-1293776:1:exon
so has part: feature:1295762-1295885:1:exon

XP_032935125.1
type: Protein
SIO_000068: ncbiprotein

position:1288826:1
position: 1288826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1295885:1
position: 1295885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1288826-1288830:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1289890-1289996:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1290256-1290378:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1292834-1292954:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1293666-1293776:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1295762-1295885:1:exon

LOC117006376
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117006376
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1297540..1301499
location: region:1297540-1301499:1
so has part: feature:1297540-1301499:1:exon
subclass of: SO_0000010

117006376
type: Gene
SIO_000068: ncbigene

position:1297540:1
position: 1297540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1301499:1
position: 1301499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1297540-1301499:1:exon

LOC117006376
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117006376
product: transcription factor CP2-like protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033078780.1
SIO_010081: LOC117006376
subclass of: SO_0000673
so part of: LOC117006376
location: join(1297540..1297622,1297703..1297854,1297942..1298009,1299166..1299271,1299345..1299451,1299541..1299693,1299862..1299972,1300053..1300150,1300228..1300282,1300374..1300467,1300543..1300633,1300739..1300815,1300939..1301084,1301179..1301230,1301381..1301499)
location: region:1297540-1301499:1
so has part: feature:1297540-1297622:1:exon
so has part: feature:1297703-1297854:1:exon
so has part: feature:1297942-1298009:1:exon
so has part: feature:1299166-1299271:1:exon
so has part: feature:1299345-1299451:1:exon
so has part: feature:1299541-1299693:1:exon
so has part: feature:1299862-1299972:1:exon
so has part: feature:1300053-1300150:1:exon
so has part: feature:1300228-1300282:1:exon
so has part: feature:1300374-1300467:1:exon
so has part: feature:1300543-1300633:1:exon
so has part: feature:1300739-1300815:1:exon
so has part: feature:1300939-1301084:1:exon
so has part: feature:1301179-1301230:1:exon
so has part: feature:1301381-1301499:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1297540-1297622:1:exon

position:1297622:1
position: 1297622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1297703-1297854:1:exon

position:1297703:1
position: 1297703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1297854:1
position: 1297854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1297942-1298009:1:exon

position:1297942:1
position: 1297942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1298009:1
position: 1298009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1299166-1299271:1:exon

position:1299166:1
position: 1299166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1299271:1
position: 1299271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1299345-1299451:1:exon

position:1299345:1
position: 1299345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1299451:1
position: 1299451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1299541-1299693:1:exon

position:1299541:1
position: 1299541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1299693:1
position: 1299693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1299862-1299972:1:exon

position:1299862:1
position: 1299862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1299972:1
position: 1299972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1300053-1300150:1:exon

position:1300053:1
position: 1300053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1300150:1
position: 1300150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1300228-1300282:1:exon

position:1300228:1
position: 1300228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1300282:1
position: 1300282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1300374-1300467:1:exon

position:1300374:1
position: 1300374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1300467:1
position: 1300467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1300543-1300633:1:exon

position:1300543:1
position: 1300543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1300633:1
position: 1300633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1300739-1300815:1:exon

position:1300739:1
position: 1300739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1300815:1
position: 1300815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1300939-1301084:1:exon

position:1300939:1
position: 1300939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1301084:1
position: 1301084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1301179-1301230:1:exon

position:1301179:1
position: 1301179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1301230:1
position: 1301230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1301381-1301499:1:exon

position:1301381:1
position: 1301381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117006376
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117006376
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor CP2-like protein 1
translation: MLFWHGQPEHCWPGPGDIHPLPGSGVLRDPPLLPYLKQEEPNGISTSQPPLPSFQYVLSAPTSPAVRHHEETLTYLNQGQSYEIRMMGMARGDPEGRRMVKSVVRVVFHDRRLQYSEQQQLEGWRWSRPGDRILDIDIPLSVGILEPQIHPTLLNTVEFLWDPSRRTSVFVQIHCISTEFTLRKNGGEKGVPFRIQIDTFGAGGKGDPPEHLHSASCLVKVFKPKGADRKQKTDREKVEKQPAAEREKFQPAYDSTVLAECPPWPDALGVPHSPPGTPGLPSPHPFKLLSPERVCVSPACAAEGPAESLAEELSPCASPLETQQWLLRRRFSSCARVFSNFSGADLLRLSRRDLIQICGAPDGIRLCHALAGRCPRPRLTLYVAQEPGGAEAAEDAGSGLYQELHLEHLTVAELTGKLAELLGLPPGQILRLSRQGPGGIHVLVSDAMIRNLQDETSFVVAIGKAPGPDGFQLLLR
SIO_010081: LOC117006376
subclass of: SO_0000673
so part of: LOC117006376
location: join(1297540..1297622,1297703..1297854,1297942..1298009,1299166..1299271,1299345..1299451,1299541..1299693,1299862..1299972,1300053..1300150,1300228..1300282,1300374..1300467,1300543..1300633,1300739..1300815,1300939..1301084,1301179..1301230,1301381..1301418)
location: region:1297540-1301418:1
so has part: feature:1297540-1297622:1:exon
so has part: feature:1297703-1297854:1:exon
so has part: feature:1297942-1298009:1:exon
so has part: feature:1299166-1299271:1:exon
so has part: feature:1299345-1299451:1:exon
so has part: feature:1299541-1299693:1:exon
so has part: feature:1299862-1299972:1:exon
so has part: feature:1300053-1300150:1:exon
so has part: feature:1300228-1300282:1:exon
so has part: feature:1300374-1300467:1:exon
so has part: feature:1300543-1300633:1:exon
so has part: feature:1300739-1300815:1:exon
so has part: feature:1300939-1301084:1:exon
so has part: feature:1301179-1301230:1:exon
so has part: feature:1301381-1301418:1:exon

XP_032934671.1
type: Protein
SIO_000068: ncbiprotein

position:1301418:1
position: 1301418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1297540-1297622:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1297703-1297854:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1297942-1298009:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1299166-1299271:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1299345-1299451:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1299541-1299693:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1299862-1299972:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300053-1300150:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1300228-1300282:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1300374-1300467:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1300543-1300633:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1300739-1300815:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1300939-1301084:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1301179-1301230:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1301381-1301418:1:exon

FBXL20
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: FBXL20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1307109..1357835)
location: region:1307109-1357835:-1
so has part: feature:1307109-1357835:-1:exon
subclass of: SO_0000010

117006374
type: Gene
SIO_000068: ncbigene

position:1307109:-1
position: 1307109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1357835:-1
position: 1357835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1307109-1357835:-1:exon

FBXL20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: FBXL20
product: F-box and leucine rich repeat protein 20, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033078776.1
SIO_010081: FBXL20
subclass of: SO_0000673
so part of: FBXL20
location: complement(join(1307109..1308285,1309927..1310139,1312518..1312574,1312667..1312711,1313682..1313742,1316744..1316874,1318642..1318716,1320193..1320319,1321580..1321675,1323444..1323512,1326193..1326287,1327864..1327938,1328666..1328720,1340505..1340566,1357800..1357835))
location: region:1307109-1357835:-1
so has part: feature:1357800-1357835:-1:exon
so has part: feature:1340505-1340566:-1:exon
so has part: feature:1328666-1328720:-1:exon
so has part: feature:1327864-1327938:-1:exon
so has part: feature:1326193-1326287:-1:exon
so has part: feature:1323444-1323512:-1:exon
so has part: feature:1321580-1321675:-1:exon
so has part: feature:1320193-1320319:-1:exon
so has part: feature:1318642-1318716:-1:exon
so has part: feature:1316744-1316874:-1:exon
so has part: feature:1313682-1313742:-1:exon
so has part: feature:1312667-1312711:-1:exon
so has part: feature:1312518-1312574:-1:exon
so has part: feature:1309927-1310139:-1:exon
so has part: feature:1307109-1308285:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1357800-1357835:-1:exon

position:1357800:-1
position: 1357800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1340505-1340566:-1:exon

position:1340505:-1
position: 1340505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1340566:-1
position: 1340566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1328666-1328720:-1:exon

position:1328666:-1
position: 1328666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1328720:-1
position: 1328720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1327864-1327938:-1:exon

position:1327864:-1
position: 1327864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1327938:-1
position: 1327938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1326193-1326287:-1:exon

position:1326193:-1
position: 1326193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1326287:-1
position: 1326287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1323444-1323512:-1:exon

position:1323444:-1
position: 1323444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1323512:-1
position: 1323512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1321580-1321675:-1:exon

position:1321580:-1
position: 1321580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1321675:-1
position: 1321675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1320193-1320319:-1:exon

position:1320193:-1
position: 1320193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1320319:-1
position: 1320319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1318642-1318716:-1:exon

position:1318642:-1
position: 1318642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1318716:-1
position: 1318716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1316744-1316874:-1:exon

position:1316744:-1
position: 1316744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1316874:-1
position: 1316874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1313682-1313742:-1:exon

position:1313682:-1
position: 1313682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1313742:-1
position: 1313742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1312667-1312711:-1:exon

position:1312667:-1
position: 1312667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1312711:-1
position: 1312711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1312518-1312574:-1:exon

position:1312518:-1
position: 1312518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1312574:-1
position: 1312574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1309927-1310139:-1:exon

position:1309927:-1
position: 1309927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1310139:-1
position: 1310139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1307109-1308285:-1:exon