Catharus ustulatus isolate bCatUst1 chromosome 18, bCatUst1.pri.v2, whole genome shotgun sequence.
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Turdidae; Catharus.
REFSEQ INFORMATION: The reference sequence is identical to\nCM020353.1.\nAssembly name: bCatUst1.pri.v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/12/22. The original whole-genome shotgun project has the\naccession WNMQ00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 06-AUG-2020\nAssembly Method :: FALCON v. DX 1.9.0; FALCON-Unzip v.\n 6.0.0.47841; purge_dups github v.\n purge_haplotig (bitbucket v1.0.3+\n 1.Nov.2018); Scaff10x v. 2; Bionano Solve\n v. 3.2.1_04122018; Salsa2 HiC v. 2.2;\n Arrow polishing and gap filling v.\n Smrtlink_6.0.0.47841; Longranger Align v.\n 2.2.2; freebayes v. 1.3.1; gEVAL manual\n curation v. 2020-08-06; VGP assembly\n pipeline v. 1.5\nAssembly Name :: bCatUst1.pri.v2\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 60.58x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Catharus ustulatus Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
uncharacterized LOC117004999, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC117004999, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
uncharacterized LOC117004999, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
splicing factor SWAP, transcript variant X3
COORDINATES: polyA evidence [ECO:0006239]
splicing factor SWAP, transcript variant X1
splicing factor SWAP, transcript variant X2
splicing factor, suppressor of white-apricot homolog isoform X1
splicing factor, suppressor of white-apricot homolog isoform X3
splicing factor, suppressor of white-apricot homolog isoform X2
adhesion G protein-coupled receptor D1, transcript variant X2
adhesion G protein-coupled receptor D1, transcript variant X1
adhesion G-protein coupled receptor D1 isoform X2
adhesion G-protein coupled receptor D1 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
RIMS binding protein 2, transcript variant X1
RIMS binding protein 2, transcript variant X2
RIMS binding protein 2, transcript variant X3
glycosyltransferase 1 domain containing 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
glycosyltransferase 1 domain-containing protein 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 11 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transmembrane protein 132C, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transmembrane protein 132C, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transmembrane protein 132B, transcript variant X1
transmembrane protein 132B, transcript variant X2
BRI3 binding protein, transcript variant X4
BRI3 binding protein, transcript variant X5
BRI3 binding protein, transcript variant X6
BRI3 binding protein, transcript variant X7
BRI3 binding protein, transcript variant X3
BRI3 binding protein, transcript variant X1
BRI3 binding protein, transcript variant X2
probable ATP-dependent RNA helicase DHX37
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA alanine (anticodon UGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA aspartic acid (anticodon GUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA phenylalanine (anticodon GAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
nuclear receptor corepressor 2, transcript variant X10
nuclear receptor corepressor 2, transcript variant X6
nuclear receptor corepressor 2, transcript variant X5
nuclear receptor corepressor 2, transcript variant X7
nuclear receptor corepressor 2, transcript variant X12
nuclear receptor corepressor 2, transcript variant X8
nuclear receptor corepressor 2, transcript variant X13
nuclear receptor corepressor 2, transcript variant X9
nuclear receptor corepressor 2, transcript variant X1
nuclear receptor corepressor 2, transcript variant X4
nuclear receptor corepressor 2, transcript variant X2
nuclear receptor corepressor 2, transcript variant X3
nuclear receptor corepressor 2 isoform X1
nuclear receptor corepressor 2 isoform X8
nuclear receptor corepressor 2 isoform X4
nuclear receptor corepressor 2 isoform X3
nuclear receptor corepressor 2 isoform X2
nuclear receptor corepressor 2 isoform X5
nuclear receptor corepressor 2 isoform X10
nuclear receptor corepressor 2 isoform X6
nuclear receptor corepressor 2 isoform X11
nuclear receptor corepressor 2 isoform X7
nuclear receptor corepressor 2, transcript variant X11
nuclear receptor corepressor 2 isoform X9
coiled-coil domain containing 92, transcript variant X1
coiled-coil domain containing 92, transcript variant X2
coiled-coil domain-containing protein 92
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: dynein axonemal heavy chain 10
general transcription factor IIH subunit 3, transcript variant X2
general transcription factor IIH subunit 3, transcript variant X1
general transcription factor IIH subunit 3 isoform X2
general transcription factor IIH subunit 3 isoform X1
eukaryotic translation initiation factor 2B subunit alpha
translation initiation factor eIF-2B subunit alpha
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: transmembrane emp24 domain-containing protein 2
Rab interacting lysosomal protein like 1, transcript variant X2
Rab interacting lysosomal protein like 1, transcript variant X1
small nuclear ribonucleoprotein U11/U12 subunit 35, transcript variant X2
small nuclear ribonucleoprotein U11/U12 subunit 35, transcript variant X1
U11/U12 small nuclear ribonucleoprotein 35 kDa protein
Rab interacting lysosomal protein like 2, transcript variant X1
Rab interacting lysosomal protein like 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
strawberry notch homolog 1, transcript variant X1
strawberry notch homolog 1, transcript variant X2
cyclin dependent kinase 2 associated protein 1, transcript variant X1
cyclin-dependent kinase 2-associated protein 1 isoform X1
cyclin dependent kinase 2 associated protein 1, transcript variant X2
cyclin-dependent kinase 2-associated protein 1 isoform X2
mitochondrial translation release factor in rescue, transcript variant X4
mitochondrial translation release factor in rescue, transcript variant X3
mitochondrial translation release factor in rescue, transcript variant X2
mitochondrial translation release factor in rescue, transcript variant X1
mitochondrial translation release factor in rescue, transcript variant X5
mitochondrial translation release factor in rescue isoform X1
mitochondrial translation release factor in rescue isoform X2
M-phase phosphoprotein 9, transcript variant X10
M-phase phosphoprotein 9, transcript variant X9
M-phase phosphoprotein 9, transcript variant X1
M-phase phosphoprotein 9, transcript variant X2
M-phase phosphoprotein 9, transcript variant X3
M-phase phosphoprotein 9, transcript variant X4
M-phase phosphoprotein 9, transcript variant X6
M-phase phosphoprotein 9, transcript variant X7
M-phase phosphoprotein 9, transcript variant X5
M-phase phosphoprotein 9, transcript variant X8
phosphatidylinositol transfer protein membrane associated 2, transcript variant X5
phosphatidylinositol transfer protein membrane associated 2, transcript variant X1
phosphatidylinositol transfer protein membrane associated 2, transcript variant X3
phosphatidylinositol transfer protein membrane associated 2, transcript variant X4
phosphatidylinositol transfer protein membrane associated 2, transcript variant X2
membrane-associated phosphatidylinositol transfer protein 2 isoform X4
membrane-associated phosphatidylinositol transfer protein 2 isoform X1
membrane-associated phosphatidylinositol transfer protein 2 isoform X2
membrane-associated phosphatidylinositol transfer protein 2 isoform X3
ADP ribosylation factor like GTPase 6 interacting protein 4, transcript variant X1
ADP ribosylation factor like GTPase 6 interacting protein 4, transcript variant X2
ADP-ribosylation factor-like protein 6-interacting protein 4
2-oxoglutarate and iron dependent oxygenase domain containing 2
2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2
ATP binding cassette subfamily B member 9
vacuolar protein sorting-associated protein 37B
huntingtin interacting protein 1 related
huntingtin-interacting protein 1-related protein
coiled-coil domain containing 62, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
coiled-coil domain containing 62, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
coiled-coil domain containing 62, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
coiled-coil domain-containing protein 62 isoform X3
coiled-coil domain-containing protein 62 isoform X2
coiled-coil domain-containing protein 62 isoform X1
density regulated re-initiation and release factor, transcript variant X1
density regulated re-initiation and release factor, transcript variant X2
actin related protein 2/3 complex subunit 3
actin-related protein 2/3 complex subunit 3
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, transcript variant X2
sarcoplasmic/endoplasmic reticulum calcium ATPase 2 isoform X2
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, transcript variant X1
sarcoplasmic/endoplasmic reticulum calcium ATPase 2 isoform X1
intraflagellar transport protein 81 homolog
uncharacterized LOC117004830, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
uncharacterized LOC117004830, transcript variant X1
purinergic receptor P2X 4, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
purinergic receptor P2X 4, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
purinergic receptor P2X 4, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
purinergic receptor P2X 4, transcript variant X2
purinergic receptor P2X 4, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
calcium/calmodulin dependent protein kinase kinase 2
calcium/calmodulin-dependent protein kinase kinase 2
ring finger protein 34, transcript variant X1
E3 ubiquitin-protein ligase RNF34 isoform X1
ring finger protein 34, transcript variant X2
E3 ubiquitin-protein ligase RNF34 isoform X2
ring finger protein 34, transcript variant X3
E3 ubiquitin-protein ligase RNF34 isoform X3
lysine demethylase 2B, transcript variant X2
lysine demethylase 2B, transcript variant X1
lysine demethylase 2B, transcript variant X3
lysine demethylase 2B, transcript variant X4
lysine demethylase 2B, transcript variant X6
lysine demethylase 2B, transcript variant X5
lysine demethylase 2B, transcript variant X7
lysine-specific demethylase 2B isoform X2
lysine-specific demethylase 2B isoform X1
lysine-specific demethylase 2B isoform X3
lysine-specific demethylase 2B isoform X4
lysine-specific demethylase 2B isoform X5
lysine-specific demethylase 2B isoform X6
ORAI calcium release-activated calcium modulator 1
calcium release-activated calcium channel protein 1
MORN repeat containing 3, transcript variant X3
MORN repeat containing 3, transcript variant X4
MORN repeat containing 3, transcript variant X2
MORN repeat containing 3, transcript variant X5
MORN repeat containing 3, transcript variant X1
transmembrane protein 120B, transcript variant X1
transmembrane protein 120B, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 5 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
ras homolog family member F, filopodia associated
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 59 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
SET domain containing 1B, histone lysine methyltransferase
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
histone-lysine N-methyltransferase SETD1B
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
26S proteasome non-ATPase regulatory subunit 9
cilia and flagella associated protein 251
cilia- and flagella-associated protein 251
BAF chromatin remodeling complex subunit BCL7A
B-cell CLL/lymphoma 7 protein family member A
MLX interacting protein, transcript variant X1
MLX interacting protein, transcript variant X2
leucine rich repeat containing 43, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
leucine rich repeat containing 43, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
leucine rich repeat containing 43, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
leucine rich repeat containing 43, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
leucine rich repeat containing 43, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
leucine rich repeat containing 43, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
leucine-rich repeat-containing protein 43 isoform X1
leucine-rich repeat-containing protein 43 isoform X2
leucine-rich repeat-containing protein 43 isoform X3
leucine-rich repeat-containing protein 43 isoform X5
leucine-rich repeat-containing protein 43 isoform X4
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4, transcript variant X1
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 4 isoform X1
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4, transcript variant X2
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 4 isoform X2
diablo IAP-binding mitochondrial protein, transcript variant X2
diablo IAP-binding mitochondrial protein, transcript variant X1
diablo IAP-binding mitochondrial protein, transcript variant X3
diablo homolog, mitochondrial isoform X3
diablo homolog, mitochondrial isoform X2
diablo homolog, mitochondrial isoform X1
VPS33A core subunit of CORVET and HOPS complexes
vacuolar protein sorting-associated protein 33A
CAP-Gly domain containing linker protein 1, transcript variant X4
CAP-Gly domain containing linker protein 1, transcript variant X8
CAP-Gly domain containing linker protein 1, transcript variant X7
CAP-Gly domain containing linker protein 1, transcript variant X12
CAP-Gly domain containing linker protein 1, transcript variant X6
CAP-Gly domain containing linker protein 1, transcript variant X5
CAP-Gly domain containing linker protein 1, transcript variant X9
CAP-Gly domain containing linker protein 1, transcript variant X3
CAP-Gly domain containing linker protein 1, transcript variant X2
CAP-Gly domain containing linker protein 1, transcript variant X1
CAP-Gly domain-containing linker protein 1 isoform X4
CAP-Gly domain-containing linker protein 1 isoform X8
CAP-Gly domain-containing linker protein 1 isoform X7
CAP-Gly domain-containing linker protein 1 isoform X12
CAP-Gly domain-containing linker protein 1 isoform X6
CAP-Gly domain-containing linker protein 1 isoform X5
CAP-Gly domain-containing linker protein 1 isoform X9
CAP-Gly domain-containing linker protein 1 isoform X3
CAP-Gly domain-containing linker protein 1 isoform X2
CAP-Gly domain-containing linker protein 1 isoform X1
CAP-Gly domain containing linker protein 1, transcript variant X10
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
CAP-Gly domain-containing linker protein 1 isoform X10
CAP-Gly domain containing linker protein 1, transcript variant X11
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
CAP-Gly domain-containing linker protein 1 isoform X11
zinc finger CCHC-type containing 8, transcript variant X2
zinc finger CCHC-type containing 8, transcript variant X1
zinc finger CCHC domain-containing protein 8 isoform X2
zinc finger CCHC domain-containing protein 8 isoform X1
arginine and serine rich coiled-coil 2, transcript variant X1
arginine and serine rich coiled-coil 2, transcript variant X2
arginine/serine-rich coiled-coil protein 2 isoform X1
arginine/serine-rich coiled-coil protein 2 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
vacuolar protein sorting-associated protein 29
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
cell cycle checkpoint control protein RAD9B
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
uncharacterized LOC117004626, transcript variant X2
uncharacterized LOC117004626, transcript variant X1
tectonic family member 1, transcript variant X3
tectonic family member 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
tectonic family member 1, transcript variant X1
hydrogen voltage gated channel 1, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
hydrogen voltage gated channel 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
hydrogen voltage gated channel 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
protein phosphatase 1 catalytic subunit gamma
serine/threonine-protein phosphatase PP1-gamma catalytic subunit
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
coiled-coil domain-containing protein 63
LOW QUALITY PROTEIN: myosin regulatory light chain 2, ventricular/cardiac muscle isoform
cut like homeobox 2, transcript variant X4
cut like homeobox 2, transcript variant X5
cut like homeobox 2, transcript variant X1
cut like homeobox 2, transcript variant X2
cut like homeobox 2, transcript variant X3
cut like homeobox 2, transcript variant X6
PH domain containing endocytic trafficking adaptor 1, transcript variant X2
PH domain containing endocytic trafficking adaptor 1, transcript variant X1
SH2B adaptor protein 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
SH2B adaptor protein 3, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
SH2B adaptor protein 3, transcript variant X3
SH2B adaptor protein 3, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
uncharacterized LOC117004765, transcript variant X2
uncharacterized LOC117004765, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
acyl-CoA dehydrogenase family member 10, transcript variant X1
acyl-CoA dehydrogenase family member 10, transcript variant X2
acyl-CoA dehydrogenase family member 10 isoform X1
acyl-CoA dehydrogenase family member 10 isoform X2
MAPK activated protein kinase 5, transcript variant X1
MAPK activated protein kinase 5, transcript variant X2
MAP kinase-activated protein kinase 5 isoform X1
MAP kinase-activated protein kinase 5 isoform X2
MAPK activated protein kinase 5, transcript variant X3
MAP kinase-activated protein kinase 5 isoform X3
transmembrane protein 116, transcript variant X2
transmembrane protein 116, transcript variant X1
endoplasmic reticulum resident protein 29
N-alpha-acetyltransferase 25, NatB auxiliary subunit
TRAF-type zinc finger domain containing 1
TRAF-type zinc finger domain-containing protein 1
HECT domain E3 ubiquitin protein ligase 4, transcript variant X4
HECT domain E3 ubiquitin protein ligase 4, transcript variant X2
HECT domain E3 ubiquitin protein ligase 4, transcript variant X3
HECT domain E3 ubiquitin protein ligase 4, transcript variant X1
probable E3 ubiquitin-protein ligase HECTD4 isoform X4
probable E3 ubiquitin-protein ligase HECTD4 isoform X2
probable E3 ubiquitin-protein ligase HECTD4 isoform X3
probable E3 ubiquitin-protein ligase HECTD4 isoform X1
ribosomal protein L6, transcript variant X1
ribosomal protein L6, transcript variant X2
protein tyrosine phosphatase non-receptor type 11
tyrosine-protein phosphatase non-receptor type 11
WSC domain containing 2, transcript variant X3
WSC domain containing 2, transcript variant X1
WSC domain containing 2, transcript variant X2
chemerin chemokine-like receptor 1, transcript variant X4
chemerin chemokine-like receptor 1, transcript variant X1
chemerin chemokine-like receptor 1, transcript variant X2
chemerin chemokine-like receptor 1, transcript variant X3
spliceosome associated factor 3, U4/U6 recycling protein
squamous cell carcinoma antigen recognized by T-cells 3
iron-sulfur cluster assembly enzyme ISCU, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 32 ESTs, 43 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
slingshot protein phosphatase 1, transcript variant X1
slingshot protein phosphatase 1, transcript variant X3
slingshot protein phosphatase 1, transcript variant X2
protein phosphatase Slingshot homolog 1 isoform X1
protein phosphatase Slingshot homolog 1 isoform X3
protein phosphatase Slingshot homolog 1 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 30
alkB homolog 2, alpha-ketoglutarate dependent dioxygenase
LOW QUALITY PROTEIN: DNA oxidative demethylase ALKBH2
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 5 bases in 4 codons; deleted 5 bases in 5 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 5 bases in 4 codons; deleted 5 bases in 5 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: acetyl-CoA carboxylase 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
potassium channel tetramerization domain containing 10
BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3
ubiquitin protein ligase E3B, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
ubiquitin protein ligase E3B, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
ubiquitin protein ligase E3B, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
ubiquitin protein ligase E3B, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
ubiquitin protein ligase E3B, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
ubiquitin protein ligase E3B, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
metabolism of cobalamin associated B, transcript variant X2
metabolism of cobalamin associated B, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
corrinoid adenosyltransferase isoform X2
corrinoid adenosyltransferase isoform X1
metabolism of cobalamin associated B, transcript variant X3
corrinoid adenosyltransferase isoform X3
mevalonate kinase, transcript variant X2
mevalonate kinase, transcript variant X1
family with sequence similarity 222 member A, transcript variant X3
family with sequence similarity 222 member A, transcript variant X2
family with sequence similarity 222 member A, transcript variant X1
transient receptor potential cation channel subfamily V member 4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
trichoplein keratin filament binding, transcript variant X2
trichoplein keratin filament binding, transcript variant X1
trichoplein keratin filament-binding protein
ARF GTPase-activating protein GIT2 isoform X4
ARF GTPase-activating protein GIT2 isoform X6
ARF GTPase-activating protein GIT2 isoform X3
ARF GTPase-activating protein GIT2 isoform X7
ARF GTPase-activating protein GIT2 isoform X2
ARF GTPase-activating protein GIT2 isoform X5
ARF GTPase-activating protein GIT2 isoform X1
ankyrin repeat domain 13A, transcript variant X1
ankyrin repeat domain-containing protein 13A isoform X1
ankyrin repeat domain 13A, transcript variant X2
ankyrin repeat domain-containing protein 13A isoform X2
uncharacterized protein C12orf76 homolog
sodium-dependent serotonin transporter-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 52 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
small G protein signaling modulator 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
small G protein signaling modulator 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
small G protein signaling modulator 1 isoform X2
small G protein signaling modulator 1 isoform X1
KIAA1671 ortholog, transcript variant X1
KIAA1671 ortholog, transcript variant X3
KIAA1671 ortholog, transcript variant X2
uncharacterized protein KIAA1671 homolog isoform X1
KIAA1671 ortholog, transcript variant X5
uncharacterized protein KIAA1671 homolog isoform X3
KIAA1671 ortholog, transcript variant X4
uncharacterized protein KIAA1671 homolog isoform X2
KIAA1671 ortholog, transcript variant X6
uncharacterized protein KIAA1671 homolog isoform X4
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 3 codons; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 68% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 3 codons; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: unconventional myosin-XVIIIb
seizure related 6 homolog like, transcript variant X1
seizure related 6 homolog like, transcript variant X4
seizure related 6 homolog like, transcript variant X2
seizure related 6 homolog like, transcript variant X3
aspartate beta-hydroxylase domain containing 2
aspartate beta-hydroxylase domain-containing protein 2
HPS4 biogenesis of lysosomal organelles complex 3 subunit 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
tuftelin interacting protein 11, transcript variant X3
tuftelin interacting protein 11, transcript variant X2
tuftelin interacting protein 11, transcript variant X1
tyrosylprotein sulfotransferase 2, transcript variant X1
tyrosylprotein sulfotransferase 2, transcript variant X3
tyrosylprotein sulfotransferase 2, transcript variant X4
tyrosylprotein sulfotransferase 2, transcript variant X2
tyrosylprotein sulfotransferase 2, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 27 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
MN1 proto-oncogene, transcriptional regulator
phosphatidylinositol transfer protein beta, transcript variant X1
phosphatidylinositol transfer protein beta, transcript variant X2
phosphatidylinositol transfer protein beta isoform isoform X1
phosphatidylinositol transfer protein beta isoform isoform X2
tetratricopeptide repeat domain 28, transcript variant X1
tetratricopeptide repeat domain 28, transcript variant X2
tetratricopeptide repeat domain 28, transcript variant X3
tetratricopeptide repeat protein 28 isoform X1
tetratricopeptide repeat protein 28 isoform X2
tetratricopeptide repeat protein 28 isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
HscB mitochondrial iron-sulfur cluster cochaperone
iron-sulfur cluster co-chaperone protein HscB
solute carrier family 2, facilitated glucose transporter member 11-like, transcript variant X2
solute carrier family 2, facilitated glucose transporter member 11-like, transcript variant X1
solute carrier family 2, facilitated glucose transporter member 11-like isoform X2
solute carrier family 2, facilitated glucose transporter member 11-like isoform X1
coiled-coil domain containing 117, transcript variant X1
coiled-coil domain containing 117, transcript variant X2
coiled-coil domain-containing protein 117 isoform X1
coiled-coil domain-containing protein 117 isoform X2
zinc and ring finger 3, transcript variant X1
zinc and ring finger 3, transcript variant X3
zinc and ring finger 3, transcript variant X2
E3 ubiquitin-protein ligase ZNRF3 isoform X2
E3 ubiquitin-protein ligase ZNRF3 isoform X1
kringle containing transmembrane protein 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
kringle containing transmembrane protein 1, transcript variant X1
unc-51 like autophagy activating kinase 1, transcript variant X1
unc-51 like autophagy activating kinase 1, transcript variant X3
unc-51 like autophagy activating kinase 1, transcript variant X2
serine/threonine-protein kinase ULK1 isoform X1
serine/threonine-protein kinase ULK1 isoform X3
serine/threonine-protein kinase ULK1 isoform X2
pseudouridine synthase 1, transcript variant X1
pseudouridine synthase 1, transcript variant X2
pseudouridine synthase 1, transcript variant X3
uncharacterized LOC117004928, transcript variant X1
uncharacterized LOC117004928, transcript variant X3
uncharacterized LOC117004928, transcript variant X4
uncharacterized LOC117004928, transcript variant X5
uncharacterized LOC117004928, transcript variant X2
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF00562
E1A binding protein p400, transcript variant X1
E1A binding protein p400, transcript variant X4
E1A binding protein p400, transcript variant X6
E1A binding protein p400, transcript variant X11
E1A binding protein p400, transcript variant X7
E1A binding protein p400, transcript variant X18
E1A binding protein p400, transcript variant X3
E1A binding protein p400, transcript variant X2
E1A binding protein p400, transcript variant X8
E1A binding protein p400, transcript variant X17
E1A binding protein p400, transcript variant X5
E1A binding protein p400, transcript variant X14
E1A binding protein p400, transcript variant X15
E1A binding protein p400, transcript variant X16
E1A binding protein p400, transcript variant X9
E1A binding protein p400, transcript variant X10
E1A binding protein p400, transcript variant X12
E1A binding protein p400, transcript variant X13
uncharacterized LOC117004825, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
uncharacterized LOC117004825, transcript variant X1
polypeptide N-acetylgalactosaminyltransferase 9
checkpoint with forkhead and ring finger domains, transcript variant X1
checkpoint with forkhead and ring finger domains, transcript variant X2
uncharacterized LOC117004986, transcript variant X1
uncharacterized LOC117004986, transcript variant X2
uncharacterized protein LOC117004986 isoform X1
uncharacterized protein LOC117004986 isoform X2
ankyrin repeat and LEM domain containing 2, transcript variant X4
ankyrin repeat and LEM domain containing 2, transcript variant X3
ankyrin repeat and LEM domain containing 2, transcript variant X1
ankyrin repeat and LEM domain-containing protein 2 isoform X1
ankyrin repeat and LEM domain containing 2, transcript variant X2
ankyrin repeat and LEM domain-containing protein 2 isoform X2
ankyrin repeat and LEM domain-containing protein 2 isoform X3
PGAM family member 5, mitochondrial serine/threonine protein phosphatase, transcript variant X2
PGAM family member 5, mitochondrial serine/threonine protein phosphatase, transcript variant X1
serine/threonine-protein phosphatase PGAM5, mitochondrial isoform X2
serine/threonine-protein phosphatase PGAM5, mitochondrial isoform X1
zinc finger DHHC-type palmitoyltransferase 8, transcript variant X2
zinc finger DHHC-type palmitoyltransferase 8, transcript variant X3
zinc finger DHHC-type palmitoyltransferase 8, transcript variant X1
zinc finger DHHC-type palmitoyltransferase 8, transcript variant X4
RAN binding protein 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
RAN binding protein 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
ran-specific GTPase-activating protein isoform X1
ran-specific GTPase-activating protein isoform X2
COORDINATES: nucleotide motif:Rfam:12.0:RF00599
tRNA (uracil-5-)-methyltransferase homolog A
transport and golgi organization 2 homolog, transcript variant X3
transport and golgi organization 2 homolog, transcript variant X2
transport and golgi organization 2 homolog, transcript variant X4
transport and golgi organization 2 homolog, transcript variant X1
transport and Golgi organization protein 2 homolog isoform X2
transport and Golgi organization protein 2 homolog isoform X1
ARVCF delta catenin family member, transcript variant X3
ARVCF delta catenin family member, transcript variant X5
ARVCF delta catenin family member, transcript variant X2
ARVCF delta catenin family member, transcript variant X6
ARVCF delta catenin family member, transcript variant X9
ARVCF delta catenin family member, transcript variant X1
ARVCF delta catenin family member, transcript variant X8
ARVCF delta catenin family member, transcript variant X7
ARVCF delta catenin family member, transcript variant X4
ARVCF delta catenin family member, transcript variant X12
ARVCF delta catenin family member, transcript variant X13
armadillo repeat protein deleted in velo-cardio-facial syndrome isoform X3
armadillo repeat protein deleted in velo-cardio-facial syndrome isoform X1
armadillo repeat protein deleted in velo-cardio-facial syndrome isoform X2
ARVCF delta catenin family member, transcript variant X14
ARVCF delta catenin family member, transcript variant X10
armadillo repeat protein deleted in velo-cardio-facial syndrome isoform X4
ARVCF delta catenin family member, transcript variant X11
armadillo repeat protein deleted in velo-cardio-facial syndrome isoform X5
armadillo repeat protein deleted in velo-cardio-facial syndrome isoform X6
catechol-O-methyltransferase, transcript variant X3
catechol-O-methyltransferase, transcript variant X2
catechol-O-methyltransferase, transcript variant X1
LOW QUALITY PROTEIN: guanine nucleotide-binding protein subunit beta-like protein 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
cell division cycle 45, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
cell division cycle 45, transcript variant X1
cell division control protein 45 homolog
ubiquitin recognition factor in ER associated degradation 1, transcript variant X1
ubiquitin recognition factor in ER-associated degradation protein 1 isoform X1
ubiquitin recognition factor in ER associated degradation 1, transcript variant X2
ubiquitin recognition factor in ER associated degradation 1, transcript variant X3
ubiquitin recognition factor in ER-associated degradation protein 1 isoform X2
ubiquitin recognition factor in ER-associated degradation protein 1 isoform X3
39S ribosomal protein L40, mitochondrial
RING-type E3 ubiquitin-protein ligase PPIL2
protein phosphatase, Mg2+/Mn2+ dependent 1F, transcript variant X2
protein phosphatase, Mg2+/Mn2+ dependent 1F, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, and 79% coverage of the annotated genomic feature by RNAseq alignments
stromal cell-derived factor 2-like protein 1
YdjC chitooligosaccharide deacetylase homolog, transcript variant X2
YdjC chitooligosaccharide deacetylase homolog, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 11 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
phosphatidylinositol 4-kinase alpha, transcript variant X1
phosphatidylinositol 4-kinase alpha, transcript variant X2
phosphatidylinositol 4-kinase alpha isoform X1
phosphatidylinositol 4-kinase alpha isoform X2
clathrin heavy chain like 1, transcript variant X1
clathrin heavy chain like 1, transcript variant X5
clathrin heavy chain like 1, transcript variant X2
clathrin heavy chain like 1, transcript variant X3
clathrin heavy chain like 1, transcript variant X4
tricarboxylate transport protein, mitochondrial
somatomedin-B and thrombospondin type-1 domain-containing protein-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 72% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: somatomedin-B and thrombospondin type-1 domain-containing protein-like
thyroid adenoma-associated protein homolog
goosecoid homeobox 2, transcript variant X2
goosecoid homeobox 2, transcript variant X1
goosecoid homeobox 2, transcript variant X3
DiGeorge syndrome critical region gene 2, transcript variant X3
DiGeorge syndrome critical region gene 2, transcript variant X4
DiGeorge syndrome critical region gene 2, transcript variant X1
DiGeorge syndrome critical region gene 2, transcript variant X2
integral membrane protein DGCR2/IDD isoform X1
integral membrane protein DGCR2/IDD isoform X3
integral membrane protein DGCR2/IDD isoform X2
integral membrane protein DGCR2/IDD isoform X4
carbonic anhydrase 15-like, transcript variant X2
carbonic anhydrase 15-like, transcript variant X1
immunoglobulin lambda-1 light chain-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
mediator of RNA polymerase II transcription subunit 13-like
T-box transcription factor 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
T-box transcription factor TBX3 isoform X1
T-box transcription factor 3, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
T-box transcription factor TBX3 isoform X2
T-box transcription factor 5, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 1 EST, 18 Proteins
T-box transcription factor TBX5 isoform X1
T-box transcription factor 5, transcript variant X2
T-box transcription factor TBX5 isoform X2
RNA binding motif protein 19, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
RNA binding motif protein 19, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
uncharacterized LOC117004980, transcript variant X1
uncharacterized LOC117004980, transcript variant X2
solute carrier family 8 member B1, transcript variant X2
solute carrier family 8 member B1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
mitochondrial sodium/calcium exchanger protein isoform X2
mitochondrial sodium/calcium exchanger protein isoform X1
two pore segment channel 1, transcript variant X1
two pore segment channel 1, transcript variant X2
two pore segment channel 1, transcript variant X4
two pore segment channel 1, transcript variant X3
two pore calcium channel protein 1 isoform X1
two pore calcium channel protein 1 isoform X2
two pore calcium channel protein 1 isoform X3
RBPJ interacting and tubulin associated 1
RBPJ-interacting and tubulin-associated protein 1
cilia and flagella associated protein 73, transcript variant X4
cilia and flagella associated protein 73, transcript variant X2
cilia and flagella associated protein 73, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
cilia and flagella associated protein 73, transcript variant X1
cilia- and flagella-associated protein 73 isoform X4
cilia- and flagella-associated protein 73 isoform X2
cilia- and flagella-associated protein 73 isoform X3
cilia- and flagella-associated protein 73 isoform X1
V-set and immunoglobulin domain containing 10
V-set and immunoglobulin domain-containing protein 10
phosphatidylethanolamine binding protein 1
phosphatidylethanolamine-binding protein 1
serine/threonine-protein kinase TAO3 isoform X2
serine/threonine-protein kinase TAO3 isoform X1
serine/threonine-protein kinase TAO3 isoform X3
uncharacterized LOC117004568, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
uncharacterized LOC117004568, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
uncharacterized LOC117004568, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
uncharacterized LOC117004568, transcript variant X4
uncharacterized LOC117004568, transcript variant X3
uncharacterized LOC117004568, transcript variant X5
uncharacterized LOC117004568, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
uncharacterized LOC117004568, transcript variant X7
SDS3 homolog, SIN3A corepressor complex component
sin3 histone deacetylase corepressor complex component SDS3
serine/arginine repetitive matrix 4, transcript variant X1
serine/arginine repetitive matrix 4, transcript variant X3
serine/arginine repetitive matrix 4, transcript variant X2
serine/arginine repetitive matrix 4, transcript variant X4
serine/arginine repetitive matrix protein 4 isoform X1
serine/arginine repetitive matrix protein 4 isoform X3
serine/arginine repetitive matrix protein 4 isoform X2
serine/arginine repetitive matrix protein 4 isoform X4
heat shock protein family B (small) member 8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
protein kinase AMP-activated non-catalytic subunit beta 1, transcript variant X1
protein kinase AMP-activated non-catalytic subunit beta 1, transcript variant X2
5'-AMP-activated protein kinase subunit beta-1
citron rho-interacting serine/threonine kinase
ribosomal protein lateral stalk subunit P0
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
COORDINATES: nucleotide motif:Rfam:12.0:RF00015
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
NAD-dependent protein lipoamidase sirtuin-4, mitochondrial isoform X1
NAD-dependent protein lipoamidase sirtuin-4, mitochondrial isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
musashi RNA binding protein 1, transcript variant X2
musashi RNA binding protein 1, transcript variant X3
musashi RNA binding protein 1, transcript variant X1
RNA-binding protein Musashi homolog 1 isoform X2
RNA-binding protein Musashi homolog 1 isoform X3
RNA-binding protein Musashi homolog 1 isoform X1
cytochrome c oxidase subunit 6A1, mitochondrial
glutamyl-tRNA amidotransferase subunit C, transcript variant X1
glutamyl-tRNA amidotransferase subunit C, transcript variant X2
glutamyl-tRNA amidotransferase subunit C, transcript variant X3
glutamyl-tRNA amidotransferase subunit C, transcript variant X4
glutamyl-tRNA amidotransferase subunit C, transcript variant X5
glutamyl-tRNA amidotransferase subunit C, transcript variant X6
glutamyl-tRNA amidotransferase subunit C, transcript variant X7
glutamyl-tRNA amidotransferase subunit C, transcript variant X8
glutamyl-tRNA amidotransferase subunit C, transcript variant X9
glutamyl-tRNA amidotransferase subunit C, transcript variant X10
glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial isoform X1
glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial isoform X2
glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial isoform X3
glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial isoform X4
glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial isoform X5
glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial isoform X6
glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial isoform X7
glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial isoform X8
glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial isoform X9
glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial isoform X10
coenzyme Q5, methyltransferase, transcript variant X2
coenzyme Q5, methyltransferase, transcript variant X1
2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial isoform X2
2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial isoform X1
POP5 homolog, ribonuclease P/MRP subunit
calcium binding protein 1, transcript variant X1
calcium binding protein 1, transcript variant X2
calcium binding protein 1, transcript variant X3
calcium binding protein 1, transcript variant X4
acyl-CoA dehydrogenase short chain, transcript variant X1
short-chain specific acyl-CoA dehydrogenase, mitochondrial isoform X1
acyl-CoA dehydrogenase short chain, transcript variant X2
short-chain specific acyl-CoA dehydrogenase, mitochondrial isoform X2
signal peptide peptidase like 3, transcript variant X2
signal peptide peptidase like 3, transcript variant X1
signal peptide peptidase-like 3 isoform X2
signal peptide peptidase-like 3 isoform X1
chromosome 18 C12orf43 homolog, transcript variant X3
chromosome 18 C12orf43 homolog, transcript variant X2
chromosome 18 C12orf43 homolog, transcript variant X1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 91% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: hepatocyte nuclear factor 1-alpha
chromosome 18 C12orf43 homolog, transcript variant X4
chromosome 18 C12orf43 homolog, transcript variant X5
ring finger protein 185, transcript variant X2
ring finger protein 185, transcript variant X1
ring finger protein 185, transcript variant X6
ring finger protein 185, transcript variant X3
ring finger protein 185, transcript variant X5
ring finger protein 185, transcript variant X4
LIM domain kinase 2, transcript variant X3
LIM domain kinase 2, transcript variant X1
LIM domain kinase 2, transcript variant X2
phosphoinositide-3-kinase interacting protein 1
phosphoinositide-3-kinase-interacting protein 1
POZ/BTB and AT hook containing zinc finger 1, transcript variant X2
POZ/BTB and AT hook containing zinc finger 1, transcript variant X5
POZ/BTB and AT hook containing zinc finger 1, transcript variant X3
POZ/BTB and AT hook containing zinc finger 1, transcript variant X1
POZ/BTB and AT hook containing zinc finger 1, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
POZ-, AT hook-, and zinc finger-containing protein 1 isoform X2
POZ-, AT hook-, and zinc finger-containing protein 1 isoform X1
POZ-, AT hook-, and zinc finger-containing protein 1 isoform X4
POZ-, AT hook-, and zinc finger-containing protein 1 isoform X3
developmentally regulated GTP binding protein 1
developmentally-regulated GTP-binding protein 1
eukaryotic translation initiation factor 4E nuclear import factor 1, transcript variant X2
eukaryotic translation initiation factor 4E nuclear import factor 1, transcript variant X4
eukaryotic translation initiation factor 4E nuclear import factor 1, transcript variant X3
eukaryotic translation initiation factor 4E nuclear import factor 1, transcript variant X1
eukaryotic translation initiation factor 4E transporter isoform X2
eukaryotic translation initiation factor 4E transporter isoform X4
eukaryotic translation initiation factor 4E transporter isoform X3
eukaryotic translation initiation factor 4E transporter isoform X1
SFI1 centrin binding protein, transcript variant X2
SFI1 centrin binding protein, transcript variant X6
SFI1 centrin binding protein, transcript variant X8
SFI1 centrin binding protein, transcript variant X4
SFI1 centrin binding protein, transcript variant X3
SFI1 centrin binding protein, transcript variant X5
SFI1 centrin binding protein, transcript variant X11
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
SFI1 centrin binding protein, transcript variant X10
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
SFI1 centrin binding protein, transcript variant X1
SFI1 centrin binding protein, transcript variant X7
SFI1 centrin binding protein, transcript variant X9
phosphatidylserine decarboxylase, transcript variant X2
phosphatidylserine decarboxylase, transcript variant X4
phosphatidylserine decarboxylase, transcript variant X3
phosphatidylserine decarboxylase, transcript variant X5
phosphatidylserine decarboxylase, transcript variant X1
phosphatidylserine decarboxylase proenzyme, mitochondrial isoform X2
phosphatidylserine decarboxylase proenzyme, mitochondrial isoform X3
phosphatidylserine decarboxylase proenzyme, mitochondrial isoform X4
phosphatidylserine decarboxylase proenzyme, mitochondrial isoform X1
melanotransferrin-like, transcript variant X4
melanotransferrin-like, transcript variant X1
melanotransferrin-like, transcript variant X5
melanotransferrin-like, transcript variant X2
melanotransferrin-like, transcript variant X3
proline rich 14 like, transcript variant X1
proline rich 14 like, transcript variant X2
proline rich 14 like, transcript variant X4
proline rich 14 like, transcript variant X3
DEP domain containing 5, GATOR1 subcomplex subunit, transcript variant X2
DEP domain containing 5, GATOR1 subcomplex subunit, transcript variant X1
DEP domain containing 5, GATOR1 subcomplex subunit, transcript variant X6
DEP domain containing 5, GATOR1 subcomplex subunit, transcript variant X4
DEP domain containing 5, GATOR1 subcomplex subunit, transcript variant X8
DEP domain containing 5, GATOR1 subcomplex subunit, transcript variant X3
DEP domain containing 5, GATOR1 subcomplex subunit, transcript variant X7
DEP domain containing 5, GATOR1 subcomplex subunit, transcript variant X5
DEP domain containing 5, GATOR1 subcomplex subunit, transcript variant X9
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 31% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: anomalous homeobox protein
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
radial spoke head 14 homolog, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
radial spoke head 14 homolog, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
radial spoke head 14 homolog, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
uncharacterized LOC117004688, transcript variant X2
uncharacterized LOC117004688, transcript variant X1
guanine nucleotide-binding protein G(z) subunit alpha
RAB36, member RAS oncogene family, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
RAB36, member RAS oncogene family, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
RAB36, member RAS oncogene family, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
RAB36, member RAS oncogene family, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
sperm antigen with calponin homology and coiled-coil domains 1 like
adenosine A2a receptor, transcript variant X2
adenosine A2a receptor, transcript variant X1
small nuclear ribonucleoprotein D3 polypeptide
leucine-rich repeat-containing protein 75B
gamma-glutamyltransferase 1, transcript variant X4
gamma-glutamyltransferase 1, transcript variant X2
glutathione hydrolase 1 proenzyme isoform X2
gamma-glutamyltransferase 1, transcript variant X1
gamma-glutamyltransferase 1, transcript variant X3
glutathione hydrolase 1 proenzyme isoform X1
glutathione hydrolase 1 proenzyme isoform X3
glutathione hydrolase 1 proenzyme isoform X4
sphingomyelin phosphodiesterase 4, transcript variant X1
sphingomyelin phosphodiesterase 4, transcript variant X2
sphingomyelin phosphodiesterase 4 isoform X1
sphingomyelin phosphodiesterase 4 isoform X2
mediator of RNA polymerase II transcription subunit 15
kelch like family member 22, transcript variant X1
kelch like family member 22, transcript variant X2
T-box-containing protein TBX6L-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
T-box-containing protein TBX6L-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
T-box-containing protein TBX6L-like, transcript variant X3
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 13 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
calcineurin binding protein 1, transcript variant X2
calcineurin binding protein 1, transcript variant X3
calcineurin binding protein 1, transcript variant X4
calcineurin binding protein 1, transcript variant X1
calcineurin-binding protein cabin-1 isoform X2
calcineurin-binding protein cabin-1 isoform X3
calcineurin-binding protein cabin-1 isoform X1
macrophage migration inhibitory factor-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 34% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: macrophage migration inhibitory factor-like
solute carrier family 2, facilitated glucose transporter member 11-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 8% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 55% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial-like
uncharacterized protein C22orf15 homolog
V-set pre-B cell surrogate light chain 3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
RING finger and transmembrane domain-containing protein 2
F-box and WD repeat domain containing 8, transcript variant X2
F-box/WD repeat-containing protein 8 isoform X2
F-box and WD repeat domain containing 8, transcript variant X1
F-box/WD repeat-containing protein 8 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
calcineurin B homologous protein 3 isoform X2
calcineurin B homologous protein 3 isoform X1
nitric oxide synthase 1, transcript variant X4
nitric oxide synthase 1, transcript variant X5
nitric oxide synthase 1, transcript variant X1
nitric oxide synthase 1, transcript variant X2
nitric oxide synthase 1, transcript variant X3
kinase suppressor of ras 2, transcript variant X3
kinase suppressor of ras 2, transcript variant X1
kinase suppressor of ras 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
replication factor C subunit 5, transcript variant X1
replication factor C subunit 5, transcript variant X2
replication factor C subunit 5 isoform X1
replication factor C subunit 5 isoform X2
WD repeat and SOCS box containing 2, transcript variant X2
WD repeat and SOCS box containing 2, transcript variant X1
WD repeat and SOCS box-containing protein 2 isoform X2
WD repeat and SOCS box-containing protein 2 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
EMI domain containing 1, transcript variant X2
EMI domain-containing protein 1 isoform X2
EMI domain containing 1, transcript variant X1
EMI domain containing 1, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
EMI domain-containing protein 1 isoform X1
EWS RNA binding protein 1, transcript variant X1
EWS RNA binding protein 1, transcript variant X2
EWS RNA binding protein 1, transcript variant X3
EWS RNA binding protein 1, transcript variant X4
EWS RNA binding protein 1, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
adaptor related protein complex 1 subunit beta 1, transcript variant X5
adaptor related protein complex 1 subunit beta 1, transcript variant X4
adaptor related protein complex 1 subunit beta 1, transcript variant X3
adaptor related protein complex 1 subunit beta 1, transcript variant X1
adaptor related protein complex 1 subunit beta 1, transcript variant X2
COORDINATES: nucleotide motif:Rfam:12.0:RF01200
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
THO complex subunit 5 homolog isoform X4
THO complex subunit 5 homolog isoform X2
THO complex subunit 5 homolog isoform X3
THO complex subunit 5 homolog isoform X1
THO complex subunit 5 homolog isoform X6
THO complex subunit 5 homolog isoform X5
nipsnap homolog 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
nipsnap homolog 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 15 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
pleckstrin homology domain-containing family A member 4-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
zinc finger matrin-type 5, transcript variant X1
zinc finger matrin-type 5, transcript variant X2
activating signal cointegrator 1 complex subunit 2, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
activating signal cointegrator 1 complex subunit 2, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
activating signal cointegrator 1 complex subunit 2, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
activating signal cointegrator 1 complex subunit 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
activating signal cointegrator 1 complex subunit 2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
activating signal cointegrator 1 complex subunit 2 isoform X1
activating signal cointegrator 1 complex subunit 2 isoform X2
myotubularin related protein 3, transcript variant X3
myotubularin related protein 3, transcript variant X2
myotubularin related protein 3, transcript variant X1
myotubularin related protein 3, transcript variant X4
myotubularin-related protein 3 isoform X3
myotubularin-related protein 3 isoform X2
myotubularin-related protein 3 isoform X1
myotubularin-related protein 3 isoform X4
acyl-CoA dehydrogenase family member 11-like
HORMA domain containing 2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
HORMA domain containing 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
cytosolic arginine sensor for mTORC1 subunit 1, transcript variant X3
cytosolic arginine sensor for mTORC1 subunit 1, transcript variant X2
cytosolic arginine sensor for mTORC1 subunit 1, transcript variant X1
cytosolic arginine sensor for mTORC1 subunit 1 isoform X3
cytosolic arginine sensor for mTORC1 subunit 1 isoform X2
cytosolic arginine sensor for mTORC1 subunit 1 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
coiled-coil domain-containing protein 157
coiled-coil domain-containing protein 157-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
galactose-3-O-sulfotransferase 1, transcript variant X4
galactose-3-O-sulfotransferase 1, transcript variant X1
galactose-3-O-sulfotransferase 1, transcript variant X3
galactose-3-O-sulfotransferase 1, transcript variant X2
pescadillo ribosomal biogenesis factor 1, transcript variant X1
pescadillo ribosomal biogenesis factor 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
LOW QUALITY PROTEIN: dynein regulatory complex protein 10
oxysterol binding protein 2, transcript variant X1
oxysterol binding protein 2, transcript variant X2
oxysterol binding protein 2, transcript variant X5
oxysterol binding protein 2, transcript variant X4
oxysterol binding protein 2, transcript variant X3
oxysterol binding protein 2, transcript variant X6
oxysterol binding protein 2, transcript variant X7
uncharacterized LOC117004896, transcript variant X1
uncharacterized LOC117004896, transcript variant X3
uncharacterized protein LOC117004896 isoform X1
uncharacterized protein LOC117004896 isoform X3
uncharacterized LOC117004896, transcript variant X2
uncharacterized protein LOC117004896 isoform X2
uncharacterized LOC117004836, transcript variant X2
uncharacterized LOC117004836, transcript variant X3
uncharacterized LOC117004836, transcript variant X1
proline dehydrogenase 1, mitochondrial-like, transcript variant X2
proline dehydrogenase 1, mitochondrial-like isoform X2
proline dehydrogenase 1, mitochondrial-like, transcript variant X1
proline dehydrogenase 1, mitochondrial-like isoform X1
scavenger receptor class F member 2, transcript variant X1
scavenger receptor class F member 2, transcript variant X2
scavenger receptor class F member 2, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
purinergic receptor P2X 6, transcript variant X7
purinergic receptor P2X 6, transcript variant X5
purinergic receptor P2X 6, transcript variant X2
purinergic receptor P2X 6, transcript variant X1
purinergic receptor P2X 6, transcript variant X6
purinergic receptor P2X 6, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
purinergic receptor P2X 6, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transmembrane protein 17A-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transmembrane protein 17A-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transmembrane protein 17A-like isoform X2
transmembrane protein 17A-like isoform X1
apoptosis inducing factor mitochondria associated 3, transcript variant X4
apoptosis inducing factor mitochondria associated 3, transcript variant X3
apoptosis inducing factor mitochondria associated 3, transcript variant X2
apoptosis inducing factor mitochondria associated 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
DNA polymerase epsilon, catalytic subunit, transcript variant X1
DNA polymerase epsilon catalytic subunit A isoform X1
DNA polymerase epsilon, catalytic subunit, transcript variant X2
DNA polymerase epsilon, catalytic subunit, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
DNA polymerase epsilon catalytic subunit A isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: group 3 secretory phospholipase A2
inositol polyphosphate-5-phosphatase J, transcript variant X1
phosphatidylinositol 4,5-bisphosphate 5-phosphatase A isoform X1
inositol polyphosphate-5-phosphatase J, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
phosphatidylinositol 4,5-bisphosphate 5-phosphatase A isoform X2
RNA polymerase II elongation factor ELL2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 70% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 93% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
serine/threonine-protein kinase PAK 1-like, transcript variant X1
serine/threonine-protein kinase PAK 1-like, transcript variant X2
serine/threonine-protein kinase PAK 1-like, transcript variant X3
serine/threonine-protein kinase PAK 1-like, transcript variant X4
serine/threonine-protein kinase PAK 1-like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
coiled-coil domain-containing protein 171-like isoform X1
serine/threonine-protein kinase PAK 1-like, transcript variant X10
serine/threonine-protein kinase PAK 1-like, transcript variant X11
serine/threonine-protein kinase PAK 1-like, transcript variant X12
serine/threonine-protein kinase PAK 1-like, transcript variant X7
serine/threonine-protein kinase PAK 1-like, transcript variant X9
serine/threonine-protein kinase PAK 1-like, transcript variant X8
serine/threonine-protein kinase PAK 1-like, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
serine/threonine-protein kinase PAK 3-like isoform X3
predicted GPI-anchored protein 58 isoform X5
predicted GPI-anchored protein 58 isoform X4
serine/threonine-protein kinase PAK 3-like isoform X2
serine/threonine-protein kinase PAK 1-like isoform X6