Catharus ustulatus isolate bCatUst1 chromosome 11, bCatUst1.pri.v2, whole genome shotgun sequence.
type: Entry
definition: Catharus ustulatus isolate bCatUst1 chromosome 11, bCatUst1.pri.v2, whole genome shotgun sequence.
sequence version: NC_046231.1
sequence date: 2021-07-28
sequence: sequence
division: CON
label: NC_046231.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA613294
dblink: SAMN12618602
keyword: WGS
keyword: RefSeq
source: Catharus ustulatus (Swainson's thrush)
organism: Catharus ustulatus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Turdidae; Catharus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020346.1.\nAssembly name: bCatUst1.pri.v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/12/22. The original whole-genome shotgun project has the\naccession WNMQ00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 06-AUG-2020\nAssembly Method :: FALCON v. DX 1.9.0; FALCON-Unzip v.\n 6.0.0.47841; purge_dups github v.\n purge_haplotig (bitbucket v1.0.3+\n 1.Nov.2018); Scaff10x v. 2; Bionano Solve\n v. 3.2.1_04122018; Salsa2 HiC v. 2.2;\n Arrow polishing and gap filling v.\n Smrtlink_6.0.0.47841; Longranger Align v.\n 2.2.2; freebayes v. 1.3.1; gEVAL manual\n curation v. 2020-08-06; VGP assembly\n pipeline v. 1.5\nAssembly Name :: bCatUst1.pri.v2\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 60.58x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Catharus ustulatus Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 22310542
topology: linear
so has quality: SO_0000987
location: 1..22310542
location: region:1-22310542:1
RO_0002162: 91951

NC_046231
type: RefSeq
SIO_000068: refseq

PRJNA613294
type: BioProject
SIO_000068: bioproject

SAMN12618602
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22310542:1
position: 22310542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-22310542:1:source
so part of: sequence
organism: Catharus ustulatus
mol type: genomic DNA
isolate: bCatUst1
chromosome: 11
sex: female
tissue type: blood
dev stage: adult
country: Canada: Kamloops
lat lon: 50.67613 N 120.33787 W
collection date: 15-Jul-2018
collected by: Kira Delmore

91951
type: Taxonomy
SIO_000068: taxonomy

LOC117001520
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117001520
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(19554..100113)
location: region:19554-100113:-1
so has part: feature:19554-100113:-1:exon
subclass of: SO_0000010

117001520
type: Gene
SIO_000068: ncbigene

position:19554:-1
position: 19554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100113:-1
position: 100113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19554-100113:-1:exon

LOC117001520
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117001520
product: hydrocephalus-inducing protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033069935.1
SIO_010081: LOC117001520
subclass of: SO_0000673
so part of: LOC117001520
location: complement(join(19554..19927,20727..21306,21870..21970,22480..22640,23776..23997,24338..24480,24810..25100,25652..25760,26310..26502,27427..27578,28157..28389,28763..28967,29581..29638,29944..30170,30457..30625,31115..31214,32166..32265,32931..33129,33286..33458,33564..33723,34957..35076,35312..35494,35661..35848,36277..36435,36917..38215,38459..38783,40011..40152,41206..41410,41709..41837,42281..42408,44339..44503,44803..44970,45448..45640,45893..46132,47203..47355,47753..47944,48032..48153,48793..48929,49886..50019,50743..50927,51456..51633,53929..54057,54904..55113,55816..55911,56391..56553,58061..58377,58853..58993,60315..60455,60713..60953,62061..62299,63649..63801,64664..64828,65275..65410,67400..67500,68284..68516,71626..71693,73600..73823,75020..75138,76361..76460,77541..77730,80191..80395,81698..81822,92305..92504,93861..93995,96938..97036,97782..97898,100063..100113))
location: region:19554-100113:-1
so has part: feature:100063-100113:-1:exon
so has part: feature:97782-97898:-1:exon
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so has part: feature:58853-58993:-1:exon
so has part: feature:58061-58377:-1:exon
so has part: feature:56391-56553:-1:exon
so has part: feature:55816-55911:-1:exon
so has part: feature:54904-55113:-1:exon
so has part: feature:53929-54057:-1:exon
so has part: feature:51456-51633:-1:exon
so has part: feature:50743-50927:-1:exon
so has part: feature:49886-50019:-1:exon
so has part: feature:48793-48929:-1:exon
so has part: feature:48032-48153:-1:exon
so has part: feature:47753-47944:-1:exon
so has part: feature:47203-47355:-1:exon
so has part: feature:45893-46132:-1:exon
so has part: feature:45448-45640:-1:exon
so has part: feature:44803-44970:-1:exon
so has part: feature:44339-44503:-1:exon
so has part: feature:42281-42408:-1:exon
so has part: feature:41709-41837:-1:exon
so has part: feature:41206-41410:-1:exon
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so has part: feature:35661-35848:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:100063-100113:-1:exon

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urn:…
SIO_000300: 2
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urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
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SIO_000300: 5
SIO_000628: feature:92305-92504:-1:exon

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urn:…
SIO_000300: 6
SIO_000628: feature:81698-81822:-1:exon

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urn:…
SIO_000300: 7
SIO_000628: feature:80191-80395:-1:exon

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urn:…
SIO_000300: 8
SIO_000628: feature:77541-77730:-1:exon

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SIO_000300: 9
SIO_000628: feature:76361-76460:-1:exon

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SIO_000300: 10
SIO_000628: feature:75020-75138:-1:exon

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SIO_000628: feature:73600-73823:-1:exon

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SIO_000628: feature:63649-63801:-1:exon

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SIO_000300: 18
SIO_000628: feature:62061-62299:-1:exon

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SIO_000628: feature:60315-60455:-1:exon

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SIO_000300: 28
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SIO_000300: 29
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SIO_000300: 31
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SIO_000300: 36
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SIO_000628: feature:40011-40152:-1:exon

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SIO_000300: 45
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SIO_000300: 47
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SIO_000300: 50
SIO_000628: feature:32931-33129:-1:exon

position:32931:-1
position: 32931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33129:-1
position: 33129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:32166-32265:-1:exon

position:32166:-1
position: 32166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32265:-1
position: 32265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:31115-31214:-1:exon

position:31115:-1
position: 31115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31214:-1
position: 31214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 53
SIO_000628: feature:30457-30625:-1:exon

position:30457:-1
position: 30457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30625:-1
position: 30625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 54
SIO_000628: feature:29944-30170:-1:exon

position:29944:-1
position: 29944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30170:-1
position: 30170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 55
SIO_000628: feature:29581-29638:-1:exon

position:29581:-1
position: 29581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29638:-1
position: 29638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 56
SIO_000628: feature:28763-28967:-1:exon

position:28763:-1
position: 28763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28967:-1
position: 28967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 57
SIO_000628: feature:28157-28389:-1:exon

position:28157:-1
position: 28157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28389:-1
position: 28389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 58
SIO_000628: feature:27427-27578:-1:exon

position:27427:-1
position: 27427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27578:-1
position: 27578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 59
SIO_000628: feature:26310-26502:-1:exon

position:26310:-1
position: 26310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26502:-1
position: 26502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 60
SIO_000628: feature:25652-25760:-1:exon

position:25652:-1
position: 25652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25760:-1
position: 25760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 61
SIO_000628: feature:24810-25100:-1:exon

position:24810:-1
position: 24810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25100:-1
position: 25100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 62
SIO_000628: feature:24338-24480:-1:exon

position:24338:-1
position: 24338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24480:-1
position: 24480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 63
SIO_000628: feature:23776-23997:-1:exon

position:23776:-1
position: 23776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23997:-1
position: 23997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 64
SIO_000628: feature:22480-22640:-1:exon

position:22480:-1
position: 22480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22640:-1
position: 22640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 65
SIO_000628: feature:21870-21970:-1:exon

position:21870:-1
position: 21870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21970:-1
position: 21970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 66
SIO_000628: feature:20727-21306:-1:exon

position:20727:-1
position: 20727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21306:-1
position: 21306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 67
SIO_000628: feature:19554-19927:-1:exon

position:19927:-1
position: 19927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117001520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117001520
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hydrocephalus-inducing protein-like
translation: MASAFPKKTPTPRLLSRERLHSITLLPSAFLKEKFLNRKKQASTEGRFLPKIHSFLEFNRLVKISMASSPYFELACPNEAYHIIPPGTSSPVRIRFTPNKNQDYSHELICITGMERIVVPIRAIGTQAMLDFPDQLDFSKCPVKYSTQKILLLHNDSNLEAHYQLNTHSPFSVVPAMGTLGAGDTMQVTVGFHPLKVGDHSGTLVVCRNRGEKCIHTKVQGEAVDVDIALSTNSLKVGKTFITTSNYKIVLIENRSNITAHFQWKAFLTEEEENKKKRRQCYLLRSQNEVWLENSIEEENIEKKDYCEDNTAILSHMVQEKMAKVQEDSMPFSDDVFSIEPMEGEIGPNCWAEIKVTFKPLEALEYQSVAYCNISGRESRLPLHLTAQGQGPLVELSSRTLNLGNILVDTPHIYEVKLINSGAIDAPFRYIPSTKNLGYCFKFVPEAGIIAPGRIQTIQISFHATTVGTFEEEFQFSVAGSPTPAILTIKGCVCAAIVHFDIDELDFGDVSFGFPCTRKCRLINASPGSLTFNLRMSQDGRQPAVSSFDQIHKHNDPSWKDGINFYLEPREFTINPSQGTILPHGYRDIEVTLCANTVMTFYRRLLVDLEGFGNEVASLTITARCLVPELRVYPQIQDYSDCLLKVPYKRKFIIGNPSHLPGCYGLVPQDREEDTPVFYSSPKPCGIVQPHTIAEIPVVIEVQTWGEHRTDGLIGVFGDERNPRSIILRSSGRLANIYTIPRDIEFGRIRALEPNSQCLTLFNEGLAPVDFRIQVACKPHCYVIEPREGVIPARGEVPVTITATLDDTGVFTDAIQLFICNTLWMTCSVRAVGIGTTIVIDKPFSPVLNLGYQFSFLPCIRRFKVTNRGHHFHGLFWSVEHHSHSISALSSPKTEDHSQSSKHTSPVFGLEPSSMELQPGESADVVLQGFSRMVQEVQDYVMCEGVMKGRRKEKIIETTITCKFIDPSIEISARQISFRVEKKASDVLTLQYKPLALTNTCSLPLDLMLDLEQPFLVCDADRQPLPDGQPVTVDVGQTCRLYIAFDPAYKMDFHSWKEKKDLKIKMVKDHPYVEYITLLGEVHFPNLQIQASALEFGCILAGTEEMRSLQMTNCSPLPVQYHWSFHADSQVNRLRHELHPPKFQPQPPRVKRTCLPLSCQLRRFKMINREETASPLKELQDLAQPSGAEVPPCTAESHCPLDLEKFRLSMDVPYPPLKVEKAFSILPQLGKLQPGKSQKVFFTFSGHLDTMASVTALCHVEGGPTYKVELTGEASRISYSLSLREISCGSQVFNEIHHSSVILANTGKIEFNWVLNLSIAEQHLPGVFLVKPTHGSIARGEKQVLKFSYMPGVPGPFSRTFQLKVAKLDPDNICLKGEASFPMISVNLPWNIEGNEKYKKLLKQHIKPLQQHSQRNKSVVQKKTRSSKTLKSQTLKTRTLKTQNLNPQVLGSGIVSSIQLQMELVMNLVRKPALELQRKFPSHHSNSKFPDKELCQNLVKVELPEYVLDMGTVLKGNTETRTLVITNPGQIPVSFQADISALQKTGFKVNPDQVQGLPHHQTRMLEVCFESAHRAEGGVDVLLPIEVAKGPTYKIRLRAAVLELSLNLSKNTLQFSDILVGQCQIQTVRLYNRFQVPCKWFIKGIEPVTKDKQGKYRTPAVGQKQQALEDEPCPFEVTPSKGTLDPERWQNLQIQFTPKEQRSYKNELKLYICDSSHSLKLHLSGQGLEARLEFSPPALKMDWVLVNSDGVDTTVVVKNPCNFPVEFYSLDFDEQYLEEEKILRMAVGSEYQKNFLMPPRAVGGTLPPEVLEDYEAQNRLKAQQAELRATAETKTTAEAMDKAAPVYHGAVTPSPEPMVEVTGNPVSRAVMRHLGIDPSSDRCEAQQDRGIVVIIHGPPQTGKTEVAVALCHYYDAAHLSIDTVVEEAIANDQSEAGCCARELCTNAAMELKSKDEGIKSQLTAQNKNKLASGEKNKNAKGKSPSTQKRKEPASKLNKKF…
SIO_010081: LOC117001520
subclass of: SO_0000673
so part of: LOC117001520
location: complement(join(19762..19927,20727..21306,21870..21970,22480..22640,23776..23997,24338..24480,24810..25100,25652..25760,26310..26502,27427..27578,28157..28389,28763..28967,29581..29638,29944..30170,30457..30625,31115..31214,32166..32265,32931..33129,33286..33458,33564..33723,34957..35076,35312..35494,35661..35848,36277..36435,36917..38215,38459..38783,40011..40152,41206..41410,41709..41837,42281..42408,44339..44503,44803..44970,45448..45640,45893..46132,47203..47355,47753..47944,48032..48153,48793..48929,49886..50019,50743..50927,51456..51633,53929..54057,54904..55113,55816..55911,56391..56553,58061..58377,58853..58993,60315..60455,60713..60953,62061..62299,63649..63801,64664..64828,65275..65410,67400..67500,68284..68516,71626..71693,73600..73823,75020..75138,76361..76460,77541..77730,80191..80395,81698..81822,92305..92504,93861..93995,96938..97036,97782..97853))
location: region:19762-97853:-1
so has part: feature:97782-97853:-1:exon
so has part: feature:96938-97036:-1:exon
so has part: feature:93861-93995:-1:exon
so has part: feature:92305-92504:-1:exon
so has part: feature:81698-81822:-1:exon
so has part: feature:80191-80395:-1:exon
so has part: feature:77541-77730:-1:exon
so has part: feature:76361-76460:-1:exon
so has part: feature:75020-75138:-1:exon
so has part: feature:73600-73823:-1:exon
so has part: feature:71626-71693:-1:exon
so has part: feature:68284-68516:-1:exon
so has part: feature:67400-67500:-1:exon
so has part: feature:65275-65410:-1:exon
so has part: feature:64664-64828:-1:exon
so has part: feature:63649-63801:-1:exon
so has part: feature:62061-62299:-1:exon
so has part: feature:60713-60953:-1:exon
so has part: feature:60315-60455:-1:exon
so has part: feature:58853-58993:-1:exon
so has part: feature:58061-58377:-1:exon
so has part: feature:56391-56553:-1:exon
so has part: feature:55816-55911:-1:exon
so has part: feature:54904-55113:-1:exon
so has part: feature:53929-54057:-1:exon
so has part: feature:51456-51633:-1:exon
so has part: feature:50743-50927:-1:exon
so has part: feature:49886-50019:-1:exon
so has part: feature:48793-48929:-1:exon
so has part: feature:48032-48153:-1:exon
so has part: feature:47753-47944:-1:exon
so has part: feature:47203-47355:-1:exon
so has part: feature:45893-46132:-1:exon
so has part: feature:45448-45640:-1:exon
so has part: feature:44803-44970:-1:exon
so has part: feature:44339-44503:-1:exon
so has part: feature:42281-42408:-1:exon
so has part: feature:41709-41837:-1:exon
so has part: feature:41206-41410:-1:exon
so has part: feature:40011-40152:-1:exon
so has part: feature:38459-38783:-1:exon
so has part: feature:36917-38215:-1:exon
so has part: feature:36277-36435:-1:exon
so has part: feature:35661-35848:-1:exon
so has part: feature:35312-35494:-1:exon
so has part: feature:34957-35076:-1:exon
so has part: feature:33564-33723:-1:exon
so has part: feature:33286-33458:-1:exon
so has part: feature:32931-33129:-1:exon
so has part: feature:32166-32265:-1:exon
so has part: feature:31115-31214:-1:exon
so has part: feature:30457-30625:-1:exon
so has part: feature:29944-30170:-1:exon
so has part: feature:29581-29638:-1:exon
so has part: feature:28763-28967:-1:exon
so has part: feature:28157-28389:-1:exon
so has part: feature:27427-27578:-1:exon
so has part: feature:26310-26502:-1:exon
so has part: feature:25652-25760:-1:exon
so has part: feature:24810-25100:-1:exon
so has part: feature:24338-24480:-1:exon
so has part: feature:23776-23997:-1:exon
so has part: feature:22480-22640:-1:exon
so has part: feature:21870-21970:-1:exon
so has part: feature:20727-21306:-1:exon
so has part: feature:19762-19927:-1:exon

XP_032925826.1
type: Protein
SIO_000068: ncbiprotein

position:19762:-1
position: 19762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97853:-1
position: 97853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97782-97853:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:96938-97036:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93861-93995:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:92305-92504:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81698-81822:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:80191-80395:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:77541-77730:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:76361-76460:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:75020-75138:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:73600-73823:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:71626-71693:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:68284-68516:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:67400-67500:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:65275-65410:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:64664-64828:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:63649-63801:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:62061-62299:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:60713-60953:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:60315-60455:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:58853-58993:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:58061-58377:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:56391-56553:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:55816-55911:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:54904-55113:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:53929-54057:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:51456-51633:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:50743-50927:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:49886-50019:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:48793-48929:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:48032-48153:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:47753-47944:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:47203-47355:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:45893-46132:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:45448-45640:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:44803-44970:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:44339-44503:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:42281-42408:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:41709-41837:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:41206-41410:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:40011-40152:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:38459-38783:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:36917-38215:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:36277-36435:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:35661-35848:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:35312-35494:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:34957-35076:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:33564-33723:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:33286-33458:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:32931-33129:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:32166-32265:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:31115-31214:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:30457-30625:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:29944-30170:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:29581-29638:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:28763-28967:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:28157-28389:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:27427-27578:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:26310-26502:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:25652-25760:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:24810-25100:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:24338-24480:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:23776-23997:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:22480-22640:-1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:21870-21970:-1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:20727-21306:-1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:19762-19927:-1:exon

LOC117001677
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117001677
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(99979..109960)
location: region:99979-109960:-1
so has part: feature:99979-109960:-1:exon
subclass of: SO_0000010

117001677
type: Gene
SIO_000068: ncbigene

position:99979:-1
position: 99979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109960:-1
position: 109960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99979-109960:-1:exon

LOC117001677
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117001677
product: hypoxanthine-guanine phosphoribosyltransferase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_033070140.1
SIO_010081: LOC117001677
subclass of: SO_0000673
so part of: LOC117001677
location: complement(join(99979..100027,100838..100913,101584..101633,102625..102704,102898..102915,103467..103529,103871..104048,104475..104581,109943..109960))
location: region:99979-109960:-1
so has part: feature:109943-109960:-1:exon
so has part: feature:104475-104581:-1:exon
so has part: feature:103871-104048:-1:exon
so has part: feature:103467-103529:-1:exon
so has part: feature:102898-102915:-1:exon
so has part: feature:102625-102704:-1:exon
so has part: feature:101584-101633:-1:exon
so has part: feature:100838-100913:-1:exon
so has part: feature:99979-100027:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:109943-109960:-1:exon

position:109943:-1
position: 109943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:104475-104581:-1:exon

position:104475:-1
position: 104475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104581:-1
position: 104581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:103871-104048:-1:exon

position:103871:-1
position: 103871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104048:-1
position: 104048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:103467-103529:-1:exon

position:103467:-1
position: 103467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103529:-1
position: 103529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:102898-102915:-1:exon

position:102898:-1
position: 102898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102915:-1
position: 102915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:102625-102704:-1:exon

position:102625:-1
position: 102625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102704:-1
position: 102704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:101584-101633:-1:exon

position:101584:-1
position: 101584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101633:-1
position: 101633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:100838-100913:-1:exon

position:100838:-1
position: 100838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100913:-1
position: 100913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:99979-100027:-1:exon

position:100027:-1
position: 100027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117001677
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117001677
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hypoxanthine-guanine phosphoribosyltransferase-like
translation: MAHGLQIRDEESGYNENLFCIPKHYEEDLEKVFIPHGLILDRTERLARDIMQDMGSHHIVALCVLKGGYKFFADLLDYIKALNQNVDKSVPVTVDFVRVSRNDSPAENISFDGEELSALNGKNVLVVEDIIETGGTMKALLSKIKDKEPRMVKVVSLLVKRTRQSPGYRPDYTGFEIPDKFVVGSALDYNEYFRDLNHICALKENAKGKYRM
SIO_010081: LOC117001677
subclass of: SO_0000673
so part of: LOC117001677
location: complement(join(99979..100027,100838..100913,101584..101633,102625..102704,102898..102915,103467..103529,103871..104048,104475..104581,109943..109960))
location: region:99979-109960:-1
so has part: feature:109943-109960:-1:exon
so has part: feature:104475-104581:-1:exon
so has part: feature:103871-104048:-1:exon
so has part: feature:103467-103529:-1:exon
so has part: feature:102898-102915:-1:exon
so has part: feature:102625-102704:-1:exon
so has part: feature:101584-101633:-1:exon
so has part: feature:100838-100913:-1:exon
so has part: feature:99979-100027:-1:exon

XP_032926031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:109943-109960:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104475-104581:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:103871-104048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:103467-103529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:102898-102915:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:102625-102704:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:101584-101633:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:100838-100913:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:99979-100027:-1:exon

ADAMTS18
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: ADAMTS18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 211041..298113
location: region:211041-298113:1
so has part: feature:211041-298113:1:exon
subclass of: SO_0000010

117001503
type: Gene
SIO_000068: ncbigene

position:211041:1
position: 211041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298113:1
position: 298113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211041-298113:1:exon

ADAMTS18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ADAMTS18
product: ADAM metallopeptidase with thrombospondin type 1 motif 18, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069905.1
SIO_010081: ADAMTS18
subclass of: SO_0000673
so part of: ADAMTS18
location: join(211041..211212,211371..211449,213257..213573,245123..245405,248995..249194,249921..250004,251283..251442,251962..252067,255148..255285,256651..256804,257827..257922,258902..259050,265651..265823,267887..268017,268161..268284,269367..269611,282452..282593,283766..283892,288023..288227,290667..290858,291215..291427,292414..292561,296152..298113)
location: region:211041-298113:1
so has part: feature:211041-211212:1:exon
so has part: feature:211371-211449:1:exon
so has part: feature:213257-213573:1:exon
so has part: feature:245123-245405:1:exon
so has part: feature:248995-249194:1:exon
so has part: feature:249921-250004:1:exon
so has part: feature:251283-251442:1:exon
so has part: feature:251962-252067:1:exon
so has part: feature:255148-255285:1:exon
so has part: feature:256651-256804:1:exon
so has part: feature:257827-257922:1:exon
so has part: feature:258902-259050:1:exon
so has part: feature:265651-265823:1:exon
so has part: feature:267887-268017:1:exon
so has part: feature:268161-268284:1:exon
so has part: feature:269367-269611:1:exon
so has part: feature:282452-282593:1:exon
so has part: feature:283766-283892:1:exon
so has part: feature:288023-288227:1:exon
so has part: feature:290667-290858:1:exon
so has part: feature:291215-291427:1:exon
so has part: feature:292414-292561:1:exon
so has part: feature:296152-298113:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:211041-211212:1:exon

position:211212:1
position: 211212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:211371-211449:1:exon

position:211371:1
position: 211371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211449:1
position: 211449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:213257-213573:1:exon

position:213257:1
position: 213257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213573:1
position: 213573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:245123-245405:1:exon

position:245123:1
position: 245123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245405:1
position: 245405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:248995-249194:1:exon

position:248995:1
position: 248995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249194:1
position: 249194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:249921-250004:1:exon

position:249921:1
position: 249921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250004:1
position: 250004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:251283-251442:1:exon

position:251283:1
position: 251283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251442:1
position: 251442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:251962-252067:1:exon

position:251962:1
position: 251962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252067:1
position: 252067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:255148-255285:1:exon

position:255148:1
position: 255148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255285:1
position: 255285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:256651-256804:1:exon

position:256651:1
position: 256651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256804:1
position: 256804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:257827-257922:1:exon

position:257827:1
position: 257827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257922:1
position: 257922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:258902-259050:1:exon

position:258902:1
position: 258902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259050:1
position: 259050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:265651-265823:1:exon

position:265651:1
position: 265651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265823:1
position: 265823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:267887-268017:1:exon

position:267887:1
position: 267887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268017:1
position: 268017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:268161-268284:1:exon

position:268161:1
position: 268161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268284:1
position: 268284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:269367-269611:1:exon

position:269367:1
position: 269367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269611:1
position: 269611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:282452-282593:1:exon

position:282452:1
position: 282452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282593:1
position: 282593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:283766-283892:1:exon

position:283766:1
position: 283766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283892:1
position: 283892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:288023-288227:1:exon

position:288023:1
position: 288023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288227:1
position: 288227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:290667-290858:1:exon

position:290667:1
position: 290667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290858:1
position: 290858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:291215-291427:1:exon

position:291215:1
position: 291215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291427:1
position: 291427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:292414-292561:1:exon

position:292414:1
position: 292414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292561:1
position: 292561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:296152-298113:1:exon

position:296152:1
position: 296152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ADAMTS18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ADAMTS18
product: ADAM metallopeptidase with thrombospondin type 1 motif 18, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069907.1
SIO_010081: ADAMTS18
subclass of: SO_0000673
so part of: ADAMTS18
location: join(211041..211212,211371..211449,213257..213573,245123..245405,248995..249194,249921..250004,251283..251442,251962..252067,255148..255285,256651..256804,257827..257922,258902..259050,265651..265823,267887..267993,268161..268284,269367..269611,282452..282593,283766..283892,288023..288227,290667..290858,291215..291427,292414..292561,296152..298113)
location: region:211041-298113:1
so has part: feature:211041-211212:1:exon
so has part: feature:211371-211449:1:exon
so has part: feature:213257-213573:1:exon
so has part: feature:245123-245405:1:exon
so has part: feature:248995-249194:1:exon
so has part: feature:249921-250004:1:exon
so has part: feature:251283-251442:1:exon
so has part: feature:251962-252067:1:exon
so has part: feature:255148-255285:1:exon
so has part: feature:256651-256804:1:exon
so has part: feature:257827-257922:1:exon
so has part: feature:258902-259050:1:exon
so has part: feature:265651-265823:1:exon
so has part: feature:267887-267993:1:exon
so has part: feature:268161-268284:1:exon
so has part: feature:269367-269611:1:exon
so has part: feature:282452-282593:1:exon
so has part: feature:283766-283892:1:exon
so has part: feature:288023-288227:1:exon
so has part: feature:290667-290858:1:exon
so has part: feature:291215-291427:1:exon
so has part: feature:292414-292561:1:exon
so has part: feature:296152-298113:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:211041-211212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:211371-211449:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:213257-213573:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:245123-245405:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:248995-249194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:249921-250004:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251283-251442:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251962-252067:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:255148-255285:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:256651-256804:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:257827-257922:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:258902-259050:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:265651-265823:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:267887-267993:1:exon

position:267993:1
position: 267993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:268161-268284:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:269367-269611:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:282452-282593:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:283766-283892:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:288023-288227:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:290667-290858:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:291215-291427:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:292414-292561:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:296152-298113:1:exon

ADAMTS18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ADAMTS18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: A disintegrin and metalloproteinase with thrombospondin motifs 18 isoform X1
translation: MDCLLLAVWTLPAAILGGSSMQFQTLLWLGSTVKTLQLCCLCCMSHAAALTSDSISELTHDYVFVTPVRVDASGSYISHDVLHSTRRKRSTQNLKSSLHYKFSAFGQELHLELKPSTILSNNFIVQVLGKDGVSNSQEHEIEQCFYQGFIRNDSTSSVAISTCVGLSGLIRTRKMEFLISPLPLQLAREHNFTSPAGHHPHVLYKRTAEGQVHGSPAQPHPKSARPGRRRTHVSRGPHARASGHRHPRAQKQHFCGRRKKYAPKPPTAETYIRSDEYGPSARFKRSSAKIQKNGSLNVETLVVADKKMLEKHGKENVTTYILTVMNMVSSLFKDGTIGSDINIIVVSLLLLEQEPGGLQINHHADQSLNSFCQWQSALVGKNGKRHDHAILLTGLDICSWKNEPCDTLGFAPISGMCSKYRSCTINEDTGLGLAFTIAHESGHNFGMIHDGEGNACRKAEGNIMSPTLTGNNGVFSWSVCSRQYLNKFLSTAQAACLIDEPKQTGQYKYPEKLPGQIYDADTQCKWQFGMKAKLCNLSFVKDICKSLWCHKVGHRCETKFMPAAEGTACGISMWCRRGQCVRYGDHGPRAVHGHWSAWSPWSECTRTCGGGVTYQERHCNNPKPQYGGKFCQGSSRVYQLCNKQPCPADSLDFRALQCAEYNSKPFRGWFYKWKPYTKVEEEDRCKLYCTAEDFDFFFAMSSKVKDGTLCSPNNYDVCIDGICEQVGCDHGLGSSAVLDACGVCEGDNSTCKFFKGQYLIQHKANDYYAVVTVPAGARSIQLQEMHISPSYLAVRSLASRYYLTGDWTIDWPGKFPFAGTVFDYQRSFTHPESLYAAGPTNETLVFEILLQGKNPGISWEYTFAKTSTENKTSVRKHSYSWVTVQSECSATCGGGHITAKAVCLEDHRARVNSSLCGPRTKPLTEIKLCNTHPCPAHWSAGEWSMCSKTCGGGQQSRHVECVQKRTFQREEVVAHSLCPVSTPAQIQVCSSQDCPPEWNPGPWSQCSKTCGRGIKKRDVYCKSTGSPKVKIMPENMCSTDSKPESQQTCVLDRCPRNDRLQWVTSAWSECSASCGPGLRQRELKCGEKSGHGKLVTFPQRRCRNIQRPNSSLEEPCNQGACPSQTLYSMVSGWYSSPWQQCTVTCGGGVQSRSVQCLRQGRPAAGCLPQHRPAVLRACNTNFCPAPAKRDDPSCVDFFTWCHLVPQHGVCNHKFYGKQCCKSCTKKN
SIO_010081: ADAMTS18
subclass of: SO_0000673
so part of: ADAMTS18
location: join(211111..211212,211371..211449,213257..213573,245123..245405,248995..249194,249921..250004,251283..251442,251962..252067,255148..255285,256651..256804,257827..257922,258902..259050,265651..265823,267887..268017,268161..268284,269367..269611,282452..282593,283766..283892,288023..288227,290667..290858,291215..291427,292414..292561,296152..296267)
location: region:211111-296267:1
so has part: feature:211111-211212:1:exon
so has part: feature:211371-211449:1:exon
so has part: feature:213257-213573:1:exon
so has part: feature:245123-245405:1:exon
so has part: feature:248995-249194:1:exon
so has part: feature:249921-250004:1:exon
so has part: feature:251283-251442:1:exon
so has part: feature:251962-252067:1:exon
so has part: feature:255148-255285:1:exon
so has part: feature:256651-256804:1:exon
so has part: feature:257827-257922:1:exon
so has part: feature:258902-259050:1:exon
so has part: feature:265651-265823:1:exon
so has part: feature:267887-268017:1:exon
so has part: feature:268161-268284:1:exon
so has part: feature:269367-269611:1:exon
so has part: feature:282452-282593:1:exon
so has part: feature:283766-283892:1:exon
so has part: feature:288023-288227:1:exon
so has part: feature:290667-290858:1:exon
so has part: feature:291215-291427:1:exon
so has part: feature:292414-292561:1:exon
so has part: feature:296152-296267:1:exon

XP_032925796.1
type: Protein
SIO_000068: ncbiprotein

position:211111:1
position: 211111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296267:1
position: 296267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211111-211212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:211371-211449:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:213257-213573:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:245123-245405:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:248995-249194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:249921-250004:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251283-251442:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251962-252067:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:255148-255285:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:256651-256804:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:257827-257922:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:258902-259050:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:265651-265823:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:267887-268017:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:268161-268284:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:269367-269611:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:282452-282593:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:283766-283892:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:288023-288227:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:290667-290858:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:291215-291427:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:292414-292561:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:296152-296267:1:exon

ADAMTS18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ADAMTS18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: A disintegrin and metalloproteinase with thrombospondin motifs 18 isoform X2
translation: MDCLLLAVWTLPAAILGGSSMQFQTLLWLGSTVKTLQLCCLCCMSHAAALTSDSISELTHDYVFVTPVRVDASGSYISHDVLHSTRRKRSTQNLKSSLHYKFSAFGQELHLELKPSTILSNNFIVQVLGKDGVSNSQEHEIEQCFYQGFIRNDSTSSVAISTCVGLSGLIRTRKMEFLISPLPLQLAREHNFTSPAGHHPHVLYKRTAEGQVHGSPAQPHPKSARPGRRRTHVSRGPHARASGHRHPRAQKQHFCGRRKKYAPKPPTAETYIRSDEYGPSARFKRSSAKIQKNGSLNVETLVVADKKMLEKHGKENVTTYILTVMNMVSSLFKDGTIGSDINIIVVSLLLLEQEPGGLQINHHADQSLNSFCQWQSALVGKNGKRHDHAILLTGLDICSWKNEPCDTLGFAPISGMCSKYRSCTINEDTGLGLAFTIAHESGHNFGMIHDGEGNACRKAEGNIMSPTLTGNNGVFSWSVCSRQYLNKFLSTAQAACLIDEPKQTGQYKYPEKLPGQIYDADTQCKWQFGMKAKLCNLSFVKDICKSLWCHKVGHRCETKFMPAAEGTACGISMWCRRGQCVRYGDHGPRAVHGHWSAWSPWSECTRTCGGGVTYQERHCNNPKPQYGGKFCQGSSRVYQLCNKQPCPADSLDFRALQCAEYNSKPFRGWFYKWKPYTKVEEEDRCKLYCTAEDFDFFFAMSSKVKDGTLCSPNNYDQVGCDHGLGSSAVLDACGVCEGDNSTCKFFKGQYLIQHKANDYYAVVTVPAGARSIQLQEMHISPSYLAVRSLASRYYLTGDWTIDWPGKFPFAGTVFDYQRSFTHPESLYAAGPTNETLVFEILLQGKNPGISWEYTFAKTSTENKTSVRKHSYSWVTVQSECSATCGGGHITAKAVCLEDHRARVNSSLCGPRTKPLTEIKLCNTHPCPAHWSAGEWSMCSKTCGGGQQSRHVECVQKRTFQREEVVAHSLCPVSTPAQIQVCSSQDCPPEWNPGPWSQCSKTCGRGIKKRDVYCKSTGSPKVKIMPENMCSTDSKPESQQTCVLDRCPRNDRLQWVTSAWSECSASCGPGLRQRELKCGEKSGHGKLVTFPQRRCRNIQRPNSSLEEPCNQGACPSQTLYSMVSGWYSSPWQQCTVTCGGGVQSRSVQCLRQGRPAAGCLPQHRPAVLRACNTNFCPAPAKRDDPSCVDFFTWCHLVPQHGVCNHKFYGKQCCKSCTKKN
SIO_010081: ADAMTS18
subclass of: SO_0000673
so part of: ADAMTS18
location: join(211111..211212,211371..211449,213257..213573,245123..245405,248995..249194,249921..250004,251283..251442,251962..252067,255148..255285,256651..256804,257827..257922,258902..259050,265651..265823,267887..267993,268161..268284,269367..269611,282452..282593,283766..283892,288023..288227,290667..290858,291215..291427,292414..292561,296152..296267)
location: region:211111-296267:1
so has part: feature:211111-211212:1:exon
so has part: feature:211371-211449:1:exon
so has part: feature:213257-213573:1:exon
so has part: feature:245123-245405:1:exon
so has part: feature:248995-249194:1:exon
so has part: feature:249921-250004:1:exon
so has part: feature:251283-251442:1:exon
so has part: feature:251962-252067:1:exon
so has part: feature:255148-255285:1:exon
so has part: feature:256651-256804:1:exon
so has part: feature:257827-257922:1:exon
so has part: feature:258902-259050:1:exon
so has part: feature:265651-265823:1:exon
so has part: feature:267887-267993:1:exon
so has part: feature:268161-268284:1:exon
so has part: feature:269367-269611:1:exon
so has part: feature:282452-282593:1:exon
so has part: feature:283766-283892:1:exon
so has part: feature:288023-288227:1:exon
so has part: feature:290667-290858:1:exon
so has part: feature:291215-291427:1:exon
so has part: feature:292414-292561:1:exon
so has part: feature:296152-296267:1:exon

XP_032925798.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211111-211212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:211371-211449:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:213257-213573:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:245123-245405:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:248995-249194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:249921-250004:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251283-251442:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251962-252067:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:255148-255285:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:256651-256804:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:257827-257922:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:258902-259050:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:265651-265823:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:267887-267993:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:268161-268284:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:269367-269611:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:282452-282593:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:283766-283892:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:288023-288227:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:290667-290858:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:291215-291427:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:292414-292561:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:296152-296267:1:exon

ADAMTS18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: ADAMTS18
product: ADAM metallopeptidase with thrombospondin type 1 motif 18, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069908.1
SIO_010081: ADAMTS18
subclass of: SO_0000673
so part of: ADAMTS18
location: join(211126..211216,211371..211449,213257..213573,245123..245405,248995..249194,249921..250004,251283..251442,251962..252067,255148..255285,256651..256804,257827..257922,258902..259050,265651..265823,267887..268017,268161..268284,269367..269611,282452..282593,283766..283892,288023..288227,290667..290858,291215..291427,292414..292561,296152..298113)
location: region:211126-298113:1
so has part: feature:211126-211216:1:exon
so has part: feature:211371-211449:1:exon
so has part: feature:213257-213573:1:exon
so has part: feature:245123-245405:1:exon
so has part: feature:248995-249194:1:exon
so has part: feature:249921-250004:1:exon
so has part: feature:251283-251442:1:exon
so has part: feature:251962-252067:1:exon
so has part: feature:255148-255285:1:exon
so has part: feature:256651-256804:1:exon
so has part: feature:257827-257922:1:exon
so has part: feature:258902-259050:1:exon
so has part: feature:265651-265823:1:exon
so has part: feature:267887-268017:1:exon
so has part: feature:268161-268284:1:exon
so has part: feature:269367-269611:1:exon
so has part: feature:282452-282593:1:exon
so has part: feature:283766-283892:1:exon
so has part: feature:288023-288227:1:exon
so has part: feature:290667-290858:1:exon
so has part: feature:291215-291427:1:exon
so has part: feature:292414-292561:1:exon
so has part: feature:296152-298113:1:exon

position:211126:1
position: 211126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211126-211216:1:exon

position:211216:1
position: 211216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:211371-211449:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:213257-213573:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:245123-245405:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:248995-249194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:249921-250004:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251283-251442:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251962-252067:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:255148-255285:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:256651-256804:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:257827-257922:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:258902-259050:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:265651-265823:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:267887-268017:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:268161-268284:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:269367-269611:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:282452-282593:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:283766-283892:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:288023-288227:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:290667-290858:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:291215-291427:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:292414-292561:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:296152-298113:1:exon

ADAMTS18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: ADAMTS18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: A disintegrin and metalloproteinase with thrombospondin motifs 18 isoform X3
translation: MSHAAALTSDSISELTHDYVFVTPVRVDASGSYISHDVLHSTRRKRSTQNLKSSLHYKFSAFGQELHLELKPSTILSNNFIVQVLGKDGVSNSQEHEIEQCFYQGFIRNDSTSSVAISTCVGLSGLIRTRKMEFLISPLPLQLAREHNFTSPAGHHPHVLYKRTAEGQVHGSPAQPHPKSARPGRRRTHVSRGPHARASGHRHPRAQKQHFCGRRKKYAPKPPTAETYIRSDEYGPSARFKRSSAKIQKNGSLNVETLVVADKKMLEKHGKENVTTYILTVMNMVSSLFKDGTIGSDINIIVVSLLLLEQEPGGLQINHHADQSLNSFCQWQSALVGKNGKRHDHAILLTGLDICSWKNEPCDTLGFAPISGMCSKYRSCTINEDTGLGLAFTIAHESGHNFGMIHDGEGNACRKAEGNIMSPTLTGNNGVFSWSVCSRQYLNKFLSTAQAACLIDEPKQTGQYKYPEKLPGQIYDADTQCKWQFGMKAKLCNLSFVKDICKSLWCHKVGHRCETKFMPAAEGTACGISMWCRRGQCVRYGDHGPRAVHGHWSAWSPWSECTRTCGGGVTYQERHCNNPKPQYGGKFCQGSSRVYQLCNKQPCPADSLDFRALQCAEYNSKPFRGWFYKWKPYTKVEEEDRCKLYCTAEDFDFFFAMSSKVKDGTLCSPNNYDVCIDGICEQVGCDHGLGSSAVLDACGVCEGDNSTCKFFKGQYLIQHKANDYYAVVTVPAGARSIQLQEMHISPSYLAVRSLASRYYLTGDWTIDWPGKFPFAGTVFDYQRSFTHPESLYAAGPTNETLVFEILLQGKNPGISWEYTFAKTSTENKTSVRKHSYSWVTVQSECSATCGGGHITAKAVCLEDHRARVNSSLCGPRTKPLTEIKLCNTHPCPAHWSAGEWSMCSKTCGGGQQSRHVECVQKRTFQREEVVAHSLCPVSTPAQIQVCSSQDCPPEWNPGPWSQCSKTCGRGIKKRDVYCKSTGSPKVKIMPENMCSTDSKPESQQTCVLDRCPRNDRLQWVTSAWSECSASCGPGLRQRELKCGEKSGHGKLVTFPQRRCRNIQRPNSSLEEPCNQGACPSQTLYSMVSGWYSSPWQQCTVTCGGGVQSRSVQCLRQGRPAAGCLPQHRPAVLRACNTNFCPAPAKRDDPSCVDFFTWCHLVPQHGVCNHKFYGKQCCKSCTKKN
SIO_010081: ADAMTS18
subclass of: SO_0000673
so part of: ADAMTS18
location: join(211398..211449,213257..213573,245123..245405,248995..249194,249921..250004,251283..251442,251962..252067,255148..255285,256651..256804,257827..257922,258902..259050,265651..265823,267887..268017,268161..268284,269367..269611,282452..282593,283766..283892,288023..288227,290667..290858,291215..291427,292414..292561,296152..296267)
location: region:211398-296267:1
so has part: feature:211398-211449:1:exon
so has part: feature:213257-213573:1:exon
so has part: feature:245123-245405:1:exon
so has part: feature:248995-249194:1:exon
so has part: feature:249921-250004:1:exon
so has part: feature:251283-251442:1:exon
so has part: feature:251962-252067:1:exon
so has part: feature:255148-255285:1:exon
so has part: feature:256651-256804:1:exon
so has part: feature:257827-257922:1:exon
so has part: feature:258902-259050:1:exon
so has part: feature:265651-265823:1:exon
so has part: feature:267887-268017:1:exon
so has part: feature:268161-268284:1:exon
so has part: feature:269367-269611:1:exon
so has part: feature:282452-282593:1:exon
so has part: feature:283766-283892:1:exon
so has part: feature:288023-288227:1:exon
so has part: feature:290667-290858:1:exon
so has part: feature:291215-291427:1:exon
so has part: feature:292414-292561:1:exon
so has part: feature:296152-296267:1:exon

XP_032925799.1
type: Protein
SIO_000068: ncbiprotein

position:211398:1
position: 211398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211398-211449:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:213257-213573:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:245123-245405:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:248995-249194:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249921-250004:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:251283-251442:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251962-252067:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:255148-255285:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:256651-256804:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:257827-257922:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:258902-259050:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:265651-265823:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:267887-268017:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:268161-268284:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:269367-269611:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:282452-282593:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:283766-283892:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:288023-288227:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:290667-290858:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:291215-291427:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:292414-292561:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:296152-296267:1:exon

LOC117001215
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117001215
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(532813..539217)
location: region:532813-539217:-1
so has part: feature:532813-539217:-1:exon
subclass of: SO_0000011

117001215
type: Gene
SIO_000068: ncbigene

position:532813:-1
position: 532813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:539217:-1
position: 539217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532813-539217:-1:exon

LOC117001215
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117001215
product: uncharacterized LOC117001215
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_004418982.1
SIO_010081: LOC117001215
subclass of: SO_0000673
so part of: LOC117001215
location: complement(join(532813..532974,537123..537252,539143..539217))
location: region:532813-539217:-1
so has part: feature:539143-539217:-1:exon
so has part: feature:537123-537252:-1:exon
so has part: feature:532813-532974:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:539143-539217:-1:exon

position:539143:-1
position: 539143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:537123-537252:-1:exon

position:537123:-1
position: 537123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537252:-1
position: 537252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:532813-532974:-1:exon

position:532974:-1
position: 532974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDH8
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: CDH8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1196643..1348430)
location: region:1196643-1348430:-1
so has part: feature:1196643-1348430:-1:exon
subclass of: SO_0000010

117001230
type: Gene
SIO_000068: ncbigene

position:1196643:-1
position: 1196643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1348430:-1
position: 1348430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1196643-1348430:-1:exon

CDH8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CDH8
product: cadherin 8, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069377.2
SIO_010081: CDH8
subclass of: SO_0000673
so part of: CDH8
location: complement(join(1196643..1198719,1200139..1200390,1223298..1223415,1230213..1230334,1248199..1248335,1254890..1255143,1257826..1258013,1261844..1262011,1274373..1274492,1291513..1291807,1331686..1332132,1348073..1348427))
location: region:1196643-1348427:-1
so has part: feature:1348073-1348427:-1:exon
so has part: feature:1331686-1332132:-1:exon
so has part: feature:1291513-1291807:-1:exon
so has part: feature:1274373-1274492:-1:exon
so has part: feature:1261844-1262011:-1:exon
so has part: feature:1257826-1258013:-1:exon
so has part: feature:1254890-1255143:-1:exon
so has part: feature:1248199-1248335:-1:exon
so has part: feature:1230213-1230334:-1:exon
so has part: feature:1223298-1223415:-1:exon
so has part: feature:1200139-1200390:-1:exon
so has part: feature:1196643-1198719:-1:exon

position:1348427:-1
position: 1348427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1348073-1348427:-1:exon

position:1348073:-1
position: 1348073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1331686-1332132:-1:exon

position:1331686:-1
position: 1331686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1332132:-1
position: 1332132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1291513-1291807:-1:exon

position:1291513:-1
position: 1291513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1291807:-1
position: 1291807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1274373-1274492:-1:exon

position:1274373:-1
position: 1274373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1274492:-1
position: 1274492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1261844-1262011:-1:exon

position:1261844:-1
position: 1261844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1262011:-1
position: 1262011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1257826-1258013:-1:exon

position:1257826:-1
position: 1257826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1258013:-1
position: 1258013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1254890-1255143:-1:exon

position:1254890:-1
position: 1254890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1255143:-1
position: 1255143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1248199-1248335:-1:exon

position:1248199:-1
position: 1248199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1248335:-1
position: 1248335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1230213-1230334:-1:exon

position:1230213:-1
position: 1230213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1230334:-1
position: 1230334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1223298-1223415:-1:exon

position:1223298:-1
position: 1223298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1223415:-1
position: 1223415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1200139-1200390:-1:exon

position:1200139:-1
position: 1200139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1200390:-1
position: 1200390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1196643-1198719:-1:exon

position:1198719:-1
position: 1198719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDH8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CDH8
product: cadherin 8, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069378.2
SIO_010081: CDH8
subclass of: SO_0000673
so part of: CDH8
location: complement(join(1196643..1198719,1200139..1200390,1223298..1223415,1230213..1230334,1248199..1248335,1254890..1255143,1257826..1258013,1261844..1262011,1274373..1274492,1291513..1291807,1331686..1332132,1338932..1338993))
location: region:1196643-1338993:-1
so has part: feature:1338932-1338993:-1:exon
so has part: feature:1331686-1332132:-1:exon
so has part: feature:1291513-1291807:-1:exon
so has part: feature:1274373-1274492:-1:exon
so has part: feature:1261844-1262011:-1:exon
so has part: feature:1257826-1258013:-1:exon
so has part: feature:1254890-1255143:-1:exon
so has part: feature:1248199-1248335:-1:exon
so has part: feature:1230213-1230334:-1:exon
so has part: feature:1223298-1223415:-1:exon
so has part: feature:1200139-1200390:-1:exon
so has part: feature:1196643-1198719:-1:exon

position:1338993:-1
position: 1338993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1338932-1338993:-1:exon

position:1338932:-1
position: 1338932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1331686-1332132:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1291513-1291807:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1274373-1274492:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1261844-1262011:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1257826-1258013:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1254890-1255143:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1248199-1248335:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1230213-1230334:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1223298-1223415:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1200139-1200390:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1196643-1198719:-1:exon

CDH8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CDH8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-8
translation: MPERLTEMLMDTWTPLIILWITVLPSIYMAPVNQSQVLPGGSSTGLKRLNEEQRVLHRSRRGWVWNQMFVLEEFSGPEPILVGRLHTDLDPGSSKIKYILSGDGAGTIFVINDKTGDIHAMKRLDREEKAEYTLTAQAVDRDTNQPLEPPSEFIIKVQDINDNAPEFVEGPYHASVPEMSLVGTFVTKVTATDADDPVYGNSAKLVYSILEGQPYFSIEPHTAIIKTALPNMDREAKEEYFVVIQAKDMGGHMGGLSGTTTVTITLSDVNDNPPKFAQSLYHFSVMEDVALGEPIGRVKANDLDIGENAKSSYDIIEGDGMDIFEITTDAQTQDGIIRVRKPLDFETKKSYTLKVEAANIHIDPRFLSGGPFKDTATVKIVVEDADEPPVFSSPTYLLEVHENAALNSVLGQVTAHDPDISASPIRFSIDRHTDLERQFNINAEDGKITLATPLDRETSTWHNITIVATETRNHSQVSRVPVAIKVLDVNDNAPEFASEHEAFLCENGKPGQVIQIVSAVDKDDPKNGHYFLYSLLPEMVNNPNFTIKKNEDNTLSILAKHSGFSRQKQEVYLLPIVVSDSGTPPMSSTGTLTIRVCGCSSDGTVQSCNAEAFVLPIGLSMGALIAILACIILLLVIVVLFVTLRRHKNEPLIIKDDEDVRENIIRYDDEGGGEEDTEAFDIATLQNPDGINGFLPRKDIKPDLQFMPRQGLAPVPNGVDVDEFINVRLHEADNDPTAPPYDSIQIYGYEGKGSAAGSLSSLESSTSDSDQNFDYLSEWGPRFKRLGELYSVGESDKET
SIO_010081: CDH8
subclass of: SO_0000673
so part of: CDH8
location: complement(join(1198226..1198719,1200139..1200390,1223298..1223415,1230213..1230334,1248199..1248335,1254890..1255143,1257826..1258013,1261844..1262011,1274373..1274492,1291513..1291807,1331686..1331937))
location: region:1198226-1331937:-1
so has part: feature:1331686-1331937:-1:exon
so has part: feature:1291513-1291807:-1:exon
so has part: feature:1274373-1274492:-1:exon
so has part: feature:1261844-1262011:-1:exon
so has part: feature:1257826-1258013:-1:exon
so has part: feature:1254890-1255143:-1:exon
so has part: feature:1248199-1248335:-1:exon
so has part: feature:1230213-1230334:-1:exon
so has part: feature:1223298-1223415:-1:exon
so has part: feature:1200139-1200390:-1:exon
so has part: feature:1198226-1198719:-1:exon

XP_032925268.1
type: Protein
SIO_000068: ncbiprotein

position:1198226:-1
position: 1198226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1331937:-1
position: 1331937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1331686-1331937:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1291513-1291807:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1274373-1274492:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1261844-1262011:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1257826-1258013:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1254890-1255143:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1248199-1248335:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1230213-1230334:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1223298-1223415:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1200139-1200390:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1198226-1198719:-1:exon

CDH8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CDH8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-8
translation: MPERLTEMLMDTWTPLIILWITVLPSIYMAPVNQSQVLPGGSSTGLKRLNEEQRVLHRSRRGWVWNQMFVLEEFSGPEPILVGRLHTDLDPGSSKIKYILSGDGAGTIFVINDKTGDIHAMKRLDREEKAEYTLTAQAVDRDTNQPLEPPSEFIIKVQDINDNAPEFVEGPYHASVPEMSLVGTFVTKVTATDADDPVYGNSAKLVYSILEGQPYFSIEPHTAIIKTALPNMDREAKEEYFVVIQAKDMGGHMGGLSGTTTVTITLSDVNDNPPKFAQSLYHFSVMEDVALGEPIGRVKANDLDIGENAKSSYDIIEGDGMDIFEITTDAQTQDGIIRVRKPLDFETKKSYTLKVEAANIHIDPRFLSGGPFKDTATVKIVVEDADEPPVFSSPTYLLEVHENAALNSVLGQVTAHDPDISASPIRFSIDRHTDLERQFNINAEDGKITLATPLDRETSTWHNITIVATETRNHSQVSRVPVAIKVLDVNDNAPEFASEHEAFLCENGKPGQVIQIVSAVDKDDPKNGHYFLYSLLPEMVNNPNFTIKKNEDNTLSILAKHSGFSRQKQEVYLLPIVVSDSGTPPMSSTGTLTIRVCGCSSDGTVQSCNAEAFVLPIGLSMGALIAILACIILLLVIVVLFVTLRRHKNEPLIIKDDEDVRENIIRYDDEGGGEEDTEAFDIATLQNPDGINGFLPRKDIKPDLQFMPRQGLAPVPNGVDVDEFINVRLHEADNDPTAPPYDSIQIYGYEGKGSAAGSLSSLESSTSDSDQNFDYLSEWGPRFKRLGELYSVGESDKET
SIO_010081: CDH8
subclass of: SO_0000673
so part of: CDH8
location: complement(join(1198226..1198719,1200139..1200390,1223298..1223415,1230213..1230334,1248199..1248335,1254890..1255143,1257826..1258013,1261844..1262011,1274373..1274492,1291513..1291807,1331686..1331937))
location: region:1198226-1331937:-1
so has part: feature:1331686-1331937:-1:exon
so has part: feature:1291513-1291807:-1:exon
so has part: feature:1274373-1274492:-1:exon
so has part: feature:1261844-1262011:-1:exon
so has part: feature:1257826-1258013:-1:exon
so has part: feature:1254890-1255143:-1:exon
so has part: feature:1248199-1248335:-1:exon
so has part: feature:1230213-1230334:-1:exon
so has part: feature:1223298-1223415:-1:exon
so has part: feature:1200139-1200390:-1:exon
so has part: feature:1198226-1198719:-1:exon

XP_032925269.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1331686-1331937:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1291513-1291807:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1274373-1274492:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1261844-1262011:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1257826-1258013:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1254890-1255143:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1248199-1248335:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1230213-1230334:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1223298-1223415:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1200139-1200390:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1198226-1198719:-1:exon

CDH8
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 91951
gene: CDH8
product: cadherin 8, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_004418989.2
SIO_010081: CDH8
so part of: CDH8
location: complement(join(1200303..1200390,1214640..1214759,1223298..1223415,1230213..1230334,1248199..1248335,1254890..1255143,1257826..1258013,1261844..1262011,1274373..1274492,1291513..1291807,1331686..1332132,1348073..1348430))
location: region:1200303-1348430:-1
so has part: feature:1348073-1348430:-1:exon
so has part: feature:1331686-1332132:-1:exon
so has part: feature:1291513-1291807:-1:exon
so has part: feature:1274373-1274492:-1:exon
so has part: feature:1261844-1262011:-1:exon
so has part: feature:1257826-1258013:-1:exon
so has part: feature:1254890-1255143:-1:exon
so has part: feature:1248199-1248335:-1:exon
so has part: feature:1230213-1230334:-1:exon
so has part: feature:1223298-1223415:-1:exon
so has part: feature:1214640-1214759:-1:exon
so has part: feature:1200303-1200390:-1:exon

position:1200303:-1
position: 1200303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1348073-1348430:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1331686-1332132:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1291513-1291807:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1274373-1274492:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1261844-1262011:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1257826-1258013:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1254890-1255143:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1248199-1248335:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1230213-1230334:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1223298-1223415:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1214640-1214759:-1:exon

position:1214640:-1
position: 1214640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1214759:-1
position: 1214759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1200303-1200390:-1:exon

SLC7A9
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: SLC7A9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1662284..1676974)
location: region:1662284-1676974:-1
so has part: feature:1662284-1676974:-1:exon
subclass of: SO_0000010

117001480
type: Gene
SIO_000068: ncbigene

position:1662284:-1
position: 1662284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1676974:-1
position: 1676974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1662284-1676974:-1:exon

SLC7A9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SLC7A9
product: solute carrier family 7 member 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 9 Proteins, and 55% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033069875.1
SIO_010081: SLC7A9
subclass of: SO_0000673
so part of: SLC7A9
location: complement(join(1662284..1662364,1662966..1663140,1663700..1663849,1668688..1668784,1669584..1669687,1671360..1671483,1671787..1671831,1673180..1673279,1673625..1673750,1674312..1674554,1675483..1675630,1676847..1676974))
location: region:1662284-1676974:-1
so has part: feature:1676847-1676974:-1:exon
so has part: feature:1675483-1675630:-1:exon
so has part: feature:1674312-1674554:-1:exon
so has part: feature:1673625-1673750:-1:exon
so has part: feature:1673180-1673279:-1:exon
so has part: feature:1671787-1671831:-1:exon
so has part: feature:1671360-1671483:-1:exon
so has part: feature:1669584-1669687:-1:exon
so has part: feature:1668688-1668784:-1:exon
so has part: feature:1663700-1663849:-1:exon
so has part: feature:1662966-1663140:-1:exon
so has part: feature:1662284-1662364:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1676847-1676974:-1:exon

position:1676847:-1
position: 1676847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1675483-1675630:-1:exon

position:1675483:-1
position: 1675483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1675630:-1
position: 1675630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1674312-1674554:-1:exon

position:1674312:-1
position: 1674312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1674554:-1
position: 1674554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1673625-1673750:-1:exon

position:1673625:-1
position: 1673625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1673750:-1
position: 1673750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1673180-1673279:-1:exon

position:1673180:-1
position: 1673180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1673279:-1
position: 1673279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1671787-1671831:-1:exon

position:1671787:-1
position: 1671787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1671831:-1
position: 1671831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1671360-1671483:-1:exon

position:1671360:-1
position: 1671360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1671483:-1
position: 1671483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1669584-1669687:-1:exon

position:1669584:-1
position: 1669584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1669687:-1
position: 1669687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1668688-1668784:-1:exon

position:1668688:-1
position: 1668688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1668784:-1
position: 1668784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1663700-1663849:-1:exon

position:1663700:-1
position: 1663700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1663849:-1
position: 1663849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1662966-1663140:-1:exon

position:1662966:-1
position: 1662966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1663140:-1
position: 1663140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1662284-1662364:-1:exon

position:1662364:-1
position: 1662364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC7A9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SLC7A9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: B(0,+)-type amino acid transporter 1
translation: MGEESLKRRKGEDKGREDRQSIQSHEPQTMNLQKQVGLISGICMIVGTIIGSGIFVSPKSVLANVEAVGPCLIVWAACGVLATLGALCFAELGTMITKSGGEYPYLMEAFGPIPAFLFSWTSLLVTKPSSFAIICLSFAEYASAPFYPGCDPPQAVIKCLAAAAIVVITIVNSLSVKLGSYLQNFLTAAKMIIVAIIIVSGIVLLAQGKTENFQDSFKGSKISISSISLAFYNGLWAYDGWNQLNYITEELKNPYRNLPLSIIIGIPLVTVCYVLINISYFTVMTSTELLQSQAVAVTFGDRVLYPASWIVPLFVVFSTLGSANGTCFTAGRLVYVAGREGHMLKLLSYISVKHLTPAPAIIFYGAIAIIYIIPGDINSLINYFSFAVWIFYGLTVLALIVMRFTRKNLKRPIKIPIIIPVIVTVVAIVLVLAPIISAPELPYLYCTLFILSGLIVYVLFVHLKFDWPQKISNPITMHLQMLLEVVPEEEVTE
SIO_010081: SLC7A9
subclass of: SO_0000673
so part of: SLC7A9
location: complement(join(1662300..1662364,1662966..1663140,1663700..1663849,1668688..1668784,1669584..1669687,1671360..1671483,1671787..1671831,1673180..1673279,1673625..1673750,1674312..1674554,1675483..1675630,1676847..1676951))
location: region:1662300-1676951:-1
so has part: feature:1676847-1676951:-1:exon
so has part: feature:1675483-1675630:-1:exon
so has part: feature:1674312-1674554:-1:exon
so has part: feature:1673625-1673750:-1:exon
so has part: feature:1673180-1673279:-1:exon
so has part: feature:1671787-1671831:-1:exon
so has part: feature:1671360-1671483:-1:exon
so has part: feature:1669584-1669687:-1:exon
so has part: feature:1668688-1668784:-1:exon
so has part: feature:1663700-1663849:-1:exon
so has part: feature:1662966-1663140:-1:exon
so has part: feature:1662300-1662364:-1:exon

XP_032925766.1
type: Protein
SIO_000068: ncbiprotein

position:1662300:-1
position: 1662300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1676951:-1
position: 1676951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1676847-1676951:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1675483-1675630:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1674312-1674554:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1673625-1673750:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1673180-1673279:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1671787-1671831:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1671360-1671483:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1669584-1669687:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1668688-1668784:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1663700-1663849:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1662966-1663140:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1662300-1662364:-1:exon

CEP89
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: CEP89
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1692648..1733415)
location: region:1692648-1733415:-1
so has part: feature:1692648-1733415:-1:exon
subclass of: SO_0000010

117001409
type: Gene
SIO_000068: ncbigene

position:1692648:-1
position: 1692648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1733415:-1
position: 1733415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1692648-1733415:-1:exon

CEP89
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CEP89
product: centrosomal protein 89
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069731.1
SIO_010081: CEP89
subclass of: SO_0000673
so part of: CEP89
location: complement(join(1692648..1693043,1703791..1703960,1710739..1710828,1713716..1713857,1714522..1714689,1715565..1715745,1716352..1716467,1717199..1717296,1719047..1719130,1720201..1720251,1721457..1721599,1721967..1722185,1723084..1723138,1724184..1724212,1726646..1726751,1727431..1727632,1730185..1730340,1731457..1731563,1733296..1733415))
location: region:1692648-1733415:-1
so has part: feature:1733296-1733415:-1:exon
so has part: feature:1731457-1731563:-1:exon
so has part: feature:1730185-1730340:-1:exon
so has part: feature:1727431-1727632:-1:exon
so has part: feature:1726646-1726751:-1:exon
so has part: feature:1724184-1724212:-1:exon
so has part: feature:1723084-1723138:-1:exon
so has part: feature:1721967-1722185:-1:exon
so has part: feature:1721457-1721599:-1:exon
so has part: feature:1720201-1720251:-1:exon
so has part: feature:1719047-1719130:-1:exon
so has part: feature:1717199-1717296:-1:exon
so has part: feature:1716352-1716467:-1:exon
so has part: feature:1715565-1715745:-1:exon
so has part: feature:1714522-1714689:-1:exon
so has part: feature:1713716-1713857:-1:exon
so has part: feature:1710739-1710828:-1:exon
so has part: feature:1703791-1703960:-1:exon
so has part: feature:1692648-1693043:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1733296-1733415:-1:exon

position:1733296:-1
position: 1733296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1731457-1731563:-1:exon

position:1731457:-1
position: 1731457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1731563:-1
position: 1731563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1730185-1730340:-1:exon

position:1730185:-1
position: 1730185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1730340:-1
position: 1730340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1727431-1727632:-1:exon

position:1727431:-1
position: 1727431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1727632:-1
position: 1727632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1726646-1726751:-1:exon

position:1726646:-1
position: 1726646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1726751:-1
position: 1726751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1724184-1724212:-1:exon

position:1724184:-1
position: 1724184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1724212:-1
position: 1724212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1723084-1723138:-1:exon

position:1723084:-1
position: 1723084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1723138:-1
position: 1723138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1721967-1722185:-1:exon

position:1721967:-1
position: 1721967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1722185:-1
position: 1722185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1721457-1721599:-1:exon

position:1721457:-1
position: 1721457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1721599:-1
position: 1721599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1720201-1720251:-1:exon

position:1720201:-1
position: 1720201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1720251:-1
position: 1720251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1719047-1719130:-1:exon

position:1719047:-1
position: 1719047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1719130:-1
position: 1719130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1717199-1717296:-1:exon

position:1717199:-1
position: 1717199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1717296:-1
position: 1717296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1716352-1716467:-1:exon

position:1716352:-1
position: 1716352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1716467:-1
position: 1716467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1715565-1715745:-1:exon

position:1715565:-1
position: 1715565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1715745:-1
position: 1715745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1714522-1714689:-1:exon

position:1714522:-1
position: 1714522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1714689:-1
position: 1714689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1713716-1713857:-1:exon

position:1713716:-1
position: 1713716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1713857:-1
position: 1713857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1710739-1710828:-1:exon

position:1710739:-1
position: 1710739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1710828:-1
position: 1710828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1703791-1703960:-1:exon

position:1703791:-1
position: 1703791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1703960:-1
position: 1703960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1692648-1693043:-1:exon

position:1693043:-1
position: 1693043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CEP89
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CEP89
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein of 89 kDa
translation: MAFLFRRGRRGPFKHIAHGLVPAATIAPKPAVPRTPPPRSPNPSPERPRSALAAAILTTTLTGRTVAIPQPRQRSLSEGDSTCLEQGCFEPYATVSELRIGSTWKLDGIERSPVQTLQISANYDEDEDMDTYLSDADKEAESSCESSEEGEGSFSTNAIYAVPCKTKKEEFPPFPIPNTDKKEVSSHETECQVVVDKSSVQTEEDQNLGLNLKEEKLIAENLIHDKPPPSPDVSVRARQVWENISKEKFRELKQENWSLNKAYQAVVQQFEGTKQQLEEQQLKLKKLEKENRKLKEAAENSHREEEAAELLSLRQQAQELVDENDALKMTVHRLNVELSRYQTKFRSLSQEEIPKLKSLPMKGPQPPWLLDMKYLSPLLLAYEDRIREKEDFILEHEEDMKNFKARVEELVKENEDLHEQLNNFITPTEWQLLQTQAKLVLEENGLLMEQLKIQQAKAKDSHRQHVQEASKLTKQIVVLEDKKQSQEEEIAEYQKQLEALCSTCEELKAKLDSRITAEEHLALVNELKSCLQQEQEKKRCEVEAAVGKIASLQAENKKLLLEKENFTADKKILQTEMQMTQKTNRRLKKKIGLLQLQLEEAMEKEVAAHHYLTNLIGLVEKIAKERDHLVFLARCLEKENHGVLKKIVEGSLRLGRLEEKVKMYKKKAAGKLGDISLKMTEQEKEFERKTAQYEQEKKHLQHLLQDKQETLKEVLEQNRKTEGELEIMWESTAKENRRMRELLHKYLRKDNRWNAVAIHEPHAQKDLVYGQDFSYCEVKTSSPTKNEIQQECQ
SIO_010081: CEP89
subclass of: SO_0000673
so part of: CEP89
location: complement(join(1692818..1693043,1703791..1703960,1710739..1710828,1713716..1713857,1714522..1714689,1715565..1715745,1716352..1716467,1717199..1717296,1719047..1719130,1720201..1720251,1721457..1721599,1721967..1722185,1723084..1723138,1724184..1724212,1726646..1726751,1727431..1727632,1730185..1730340,1731457..1731563,1733296..1733334))
location: region:1692818-1733334:-1
so has part: feature:1733296-1733334:-1:exon
so has part: feature:1731457-1731563:-1:exon
so has part: feature:1730185-1730340:-1:exon
so has part: feature:1727431-1727632:-1:exon
so has part: feature:1726646-1726751:-1:exon
so has part: feature:1724184-1724212:-1:exon
so has part: feature:1723084-1723138:-1:exon
so has part: feature:1721967-1722185:-1:exon
so has part: feature:1721457-1721599:-1:exon
so has part: feature:1720201-1720251:-1:exon
so has part: feature:1719047-1719130:-1:exon
so has part: feature:1717199-1717296:-1:exon
so has part: feature:1716352-1716467:-1:exon
so has part: feature:1715565-1715745:-1:exon
so has part: feature:1714522-1714689:-1:exon
so has part: feature:1713716-1713857:-1:exon
so has part: feature:1710739-1710828:-1:exon
so has part: feature:1703791-1703960:-1:exon
so has part: feature:1692818-1693043:-1:exon

XP_032925622.1
type: Protein
SIO_000068: ncbiprotein

position:1692818:-1
position: 1692818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1733334:-1
position: 1733334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1733296-1733334:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1731457-1731563:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1730185-1730340:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1727431-1727632:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1726646-1726751:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1724184-1724212:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1723084-1723138:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1721967-1722185:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1721457-1721599:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1720201-1720251:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1719047-1719130:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1717199-1717296:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1716352-1716467:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1715565-1715745:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1714522-1714689:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1713716-1713857:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1710739-1710828:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1703791-1703960:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1692818-1693043:-1:exon

FAAP24
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: FAAP24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1733562..1737478
location: region:1733562-1737478:1
so has part: feature:1733562-1737478:1:exon
subclass of: SO_0000010

117001411
type: Gene
SIO_000068: ncbigene

position:1733562:1
position: 1733562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1737478:1
position: 1737478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1733562-1737478:1:exon

FAAP24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: FAAP24
product: FA core complex associated protein 24
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069734.2
SIO_010081: FAAP24
subclass of: SO_0000673
so part of: FAAP24
location: join(1733562..1733942,1734231..1734382,1734974..1735113,1735411..1735563,1736199..1737478)
location: region:1733562-1737478:1
so has part: feature:1733562-1733942:1:exon
so has part: feature:1734231-1734382:1:exon
so has part: feature:1734974-1735113:1:exon
so has part: feature:1735411-1735563:1:exon
so has part: feature:1736199-1737478:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1733562-1733942:1:exon

position:1733942:1
position: 1733942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1734231-1734382:1:exon

position:1734231:1
position: 1734231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1734382:1
position: 1734382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1734974-1735113:1:exon

position:1734974:1
position: 1734974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1735113:1
position: 1735113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1735411-1735563:1:exon

position:1735411:1
position: 1735411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1735563:1
position: 1735563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1736199-1737478:1:exon

position:1736199:1
position: 1736199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FAAP24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: FAAP24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Fanconi anemia core complex-associated protein 24
translation: MTTKANFPATAGSIVVPYGHVIANEKWRGSEVAQRLQGKVRLIFEDGLGLVDFHLSNRTCILLISEADLVAGDEFKRRLVKFRNASSLRGIVIVEKTQISGQYYSGVQKLVVLELGMVLLPVANQGEASQLIIQLVREQSRDRGSNPFVRKQRSQLAEPAVLQAVQHIPGVGKTKALLLLQRFGSIHRLCNTPIHELEQVVGQTVAQQIYTFLHS
SIO_010081: FAAP24
subclass of: SO_0000673
so part of: FAAP24
location: join(1734271..1734382,1734974..1735113,1735411..1735563,1736199..1736441)
location: region:1734271-1736441:1
so has part: feature:1734271-1734382:1:exon
so has part: feature:1734974-1735113:1:exon
so has part: feature:1735411-1735563:1:exon
so has part: feature:1736199-1736441:1:exon

XP_032925625.1
type: Protein
SIO_000068: ncbiprotein

position:1734271:1
position: 1734271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1736441:1
position: 1736441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1734271-1734382:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1734974-1735113:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1735411-1735563:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1736199-1736441:1:exon

RHPN2
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: RHPN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1738507..1778681)
location: region:1738507-1778681:-1
so has part: feature:1738507-1778681:-1:exon
subclass of: SO_0000010

117001410
type: Gene
SIO_000068: ncbigene

position:1738507:-1
position: 1738507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1778681:-1
position: 1778681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1738507-1778681:-1:exon

RHPN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: RHPN2
product: rhophilin Rho GTPase binding protein 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069733.2
SIO_010081: RHPN2
subclass of: SO_0000673
so part of: RHPN2
location: complement(join(1738507..1739964,1741725..1741880,1743422..1743568,1744308..1744384,1745125..1745319,1745409..1745528,1745987..1746143,1747408..1747595,1749834..1750000,1751536..1751660,1752676..1752753,1753734..1753809,1756524..1756652,1759864..1759979,1777666..1778681))
location: region:1738507-1778681:-1
so has part: feature:1777666-1778681:-1:exon
so has part: feature:1759864-1759979:-1:exon
so has part: feature:1756524-1756652:-1:exon
so has part: feature:1753734-1753809:-1:exon
so has part: feature:1752676-1752753:-1:exon
so has part: feature:1751536-1751660:-1:exon
so has part: feature:1749834-1750000:-1:exon
so has part: feature:1747408-1747595:-1:exon
so has part: feature:1745987-1746143:-1:exon
so has part: feature:1745409-1745528:-1:exon
so has part: feature:1745125-1745319:-1:exon
so has part: feature:1744308-1744384:-1:exon
so has part: feature:1743422-1743568:-1:exon
so has part: feature:1741725-1741880:-1:exon
so has part: feature:1738507-1739964:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1777666-1778681:-1:exon

position:1777666:-1
position: 1777666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1759864-1759979:-1:exon

position:1759864:-1
position: 1759864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1759979:-1
position: 1759979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1756524-1756652:-1:exon

position:1756524:-1
position: 1756524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1756652:-1
position: 1756652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1753734-1753809:-1:exon

position:1753734:-1
position: 1753734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1753809:-1
position: 1753809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1752676-1752753:-1:exon

position:1752676:-1
position: 1752676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1752753:-1
position: 1752753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1751536-1751660:-1:exon

position:1751536:-1
position: 1751536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1751660:-1
position: 1751660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1749834-1750000:-1:exon

position:1749834:-1
position: 1749834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1750000:-1
position: 1750000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1747408-1747595:-1:exon

position:1747408:-1
position: 1747408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1747595:-1
position: 1747595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1745987-1746143:-1:exon

position:1745987:-1
position: 1745987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1746143:-1
position: 1746143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1745409-1745528:-1:exon

position:1745409:-1
position: 1745409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1745528:-1
position: 1745528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1745125-1745319:-1:exon

position:1745125:-1
position: 1745125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1745319:-1
position: 1745319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1744308-1744384:-1:exon

position:1744308:-1
position: 1744308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1744384:-1
position: 1744384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1743422-1743568:-1:exon

position:1743422:-1
position: 1743422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1743568:-1
position: 1743568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1741725-1741880:-1:exon

position:1741725:-1
position: 1741725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1741880:-1
position: 1741880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1738507-1739964:-1:exon

position:1739964:-1
position: 1739964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RHPN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: RHPN2
product: rhophilin Rho GTPase binding protein 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069732.1
SIO_010081: RHPN2
subclass of: SO_0000673
so part of: RHPN2
location: complement(join(1738507..1739964,1741725..1741880,1743422..1743568,1744308..1744384,1745125..1745319,1745409..1745528,1745987..1746143,1747408..1747595,1749834..1750000,1751536..1751660,1752676..1752753,1753734..1753809,1756524..1756652,1759864..1759979,1771518..1771923))
location: region:1738507-1771923:-1
so has part: feature:1771518-1771923:-1:exon
so has part: feature:1759864-1759979:-1:exon
so has part: feature:1756524-1756652:-1:exon
so has part: feature:1753734-1753809:-1:exon
so has part: feature:1752676-1752753:-1:exon
so has part: feature:1751536-1751660:-1:exon
so has part: feature:1749834-1750000:-1:exon
so has part: feature:1747408-1747595:-1:exon
so has part: feature:1745987-1746143:-1:exon
so has part: feature:1745409-1745528:-1:exon
so has part: feature:1745125-1745319:-1:exon
so has part: feature:1744308-1744384:-1:exon
so has part: feature:1743422-1743568:-1:exon
so has part: feature:1741725-1741880:-1:exon
so has part: feature:1738507-1739964:-1:exon

position:1771923:-1
position: 1771923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1771518-1771923:-1:exon

position:1771518:-1
position: 1771518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1759864-1759979:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1756524-1756652:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1753734-1753809:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1752676-1752753:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1751536-1751660:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1749834-1750000:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1747408-1747595:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1745987-1746143:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1745409-1745528:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1745125-1745319:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1744308-1744384:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1743422-1743568:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1741725-1741880:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1738507-1739964:-1:exon

RHPN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: RHPN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rhophilin-2 isoform X1
translation: MTDALLPQAAEPAGDGYFRKGCNPLAETGRSKLQNQRAVLNQQILKAVRMRAGAENLLRATTNNKVREQVLLELSFVNSDLQILKEELEGLNISVEVYQNAEETFSIPLVPLGLKETKDVDFTLPLKDFILEHYSQDSSEYEDEIADLMDLRQACRTPSRDEAGIEMLISYFLQLGYVENRFFPPTRHIGVLFTWYDSFTGVPVCQQNLLLEKASILFNIGALYTQIGTRCNRQTQAGLENAVDAFQKAAGVLSYLKETFTHTPSYDMSPAMLNVLVKMMLAQARECVFEQIGLSGIRNEFFTLIKMTQEVAKVGEVYMLVNTAMNQEPVKENIPYSWSKLAQIKSDHYKALAHYFIATILCDHELQPGDDEDQQEKALSQLYDHIPEGLMVLAVLKDKVQRKQLGKAHLRKAIVYHEEALRVCGLCKKLRNIEVLQEVLTAAHKRSLLKYAQQETEDDFLSLIQAPDILSKTEHKIETIAPQFSKVKVKDFFHKLGPLTVFSAKQRWTAPRTICLHPEAGGLGFSLKGGAPVQVYCLDPACSAASAGLKEGDYIVSVGGMDCKWLGVNEVLEKLKSVGKEPMELEVISCQDTAASLHSKSATYSMGMQKTYSLICLAMDEDKMDHTKKAPLKLPFLSWGTKNRQKAASTLCLPSAVAGSSHIKKKLSPFTLLNSESSLY
SIO_010081: RHPN2
subclass of: SO_0000673
so part of: RHPN2
location: complement(join(1739713..1739964,1741725..1741880,1743422..1743568,1744308..1744384,1745125..1745319,1745409..1745528,1745987..1746143,1747408..1747595,1749834..1750000,1751536..1751660,1752676..1752753,1753734..1753809,1756524..1756652,1759864..1759979,1771518..1771577))
location: region:1739713-1771577:-1
so has part: feature:1771518-1771577:-1:exon
so has part: feature:1759864-1759979:-1:exon
so has part: feature:1756524-1756652:-1:exon
so has part: feature:1753734-1753809:-1:exon
so has part: feature:1752676-1752753:-1:exon
so has part: feature:1751536-1751660:-1:exon
so has part: feature:1749834-1750000:-1:exon
so has part: feature:1747408-1747595:-1:exon
so has part: feature:1745987-1746143:-1:exon
so has part: feature:1745409-1745528:-1:exon
so has part: feature:1745125-1745319:-1:exon
so has part: feature:1744308-1744384:-1:exon
so has part: feature:1743422-1743568:-1:exon
so has part: feature:1741725-1741880:-1:exon
so has part: feature:1739713-1739964:-1:exon

XP_032925623.1
type: Protein
SIO_000068: ncbiprotein

position:1739713:-1
position: 1739713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1771577:-1
position: 1771577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1771518-1771577:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1759864-1759979:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1756524-1756652:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1753734-1753809:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1752676-1752753:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1751536-1751660:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1749834-1750000:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1747408-1747595:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1745987-1746143:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1745409-1745528:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1745125-1745319:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1744308-1744384:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1743422-1743568:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1741725-1741880:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1739713-1739964:-1:exon

RHPN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: RHPN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rhophilin-2 isoform X2
translation: MRAGAENLLRATTNNKVREQVLLELSFVNSDLQILKEELEGLNISVEVYQNAEETFSIPLVPLGLKETKDVDFTLPLKDFILEHYSQDSSEYEDEIADLMDLRQACRTPSRDEAGIEMLISYFLQLGYVENRFFPPTRHIGVLFTWYDSFTGVPVCQQNLLLEKASILFNIGALYTQIGTRCNRQTQAGLENAVDAFQKAAGVLSYLKETFTHTPSYDMSPAMLNVLVKMMLAQARECVFEQIGLSGIRNEFFTLIKMTQEVAKVGEVYMLVNTAMNQEPVKENIPYSWSKLAQIKSDHYKALAHYFIATILCDHELQPGDDEDQQEKALSQLYDHIPEGLMVLAVLKDKVQRKQLGKAHLRKAIVYHEEALRVCGLCKKLRNIEVLQEVLTAAHKRSLLKYAQQETEDDFLSLIQAPDILSKTEHKIETIAPQFSKVKVKDFFHKLGPLTVFSAKQRWTAPRTICLHPEAGGLGFSLKGGAPVQVYCLDPACSAASAGLKEGDYIVSVGGMDCKWLGVNEVLEKLKSVGKEPMELEVISCQDTAASLHSKSATYSMGMQKTYSLICLAMDEDKMDHTKKAPLKLPFLSWGTKNRQKAASTLCLPSAVAGSSHIKKKLSPFTLLNSESSLY
SIO_010081: RHPN2
subclass of: SO_0000673
so part of: RHPN2
location: complement(join(1739713..1739964,1741725..1741880,1743422..1743568,1744308..1744384,1745125..1745319,1745409..1745528,1745987..1746143,1747408..1747595,1749834..1750000,1751536..1751660,1752676..1752753,1753734..1753809,1756524..1756652,1759864..1759892))
location: region:1739713-1759892:-1
so has part: feature:1759864-1759892:-1:exon
so has part: feature:1756524-1756652:-1:exon
so has part: feature:1753734-1753809:-1:exon
so has part: feature:1752676-1752753:-1:exon
so has part: feature:1751536-1751660:-1:exon
so has part: feature:1749834-1750000:-1:exon
so has part: feature:1747408-1747595:-1:exon
so has part: feature:1745987-1746143:-1:exon
so has part: feature:1745409-1745528:-1:exon
so has part: feature:1745125-1745319:-1:exon
so has part: feature:1744308-1744384:-1:exon
so has part: feature:1743422-1743568:-1:exon
so has part: feature:1741725-1741880:-1:exon
so has part: feature:1739713-1739964:-1:exon

XP_032925624.1
type: Protein
SIO_000068: ncbiprotein

position:1759892:-1
position: 1759892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1759864-1759892:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1756524-1756652:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1753734-1753809:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1752676-1752753:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1751536-1751660:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1749834-1750000:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1747408-1747595:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1745987-1746143:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1745409-1745528:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1745125-1745319:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1744308-1744384:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1743422-1743568:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1741725-1741880:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1739713-1739964:-1:exon

GPATCH1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: GPATCH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1778750..1794262
location: region:1778750-1794262:1
so has part: feature:1778750-1794262:1:exon
subclass of: SO_0000010

117001408
type: Gene
SIO_000068: ncbigene

position:1778750:1
position: 1778750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1794262:1
position: 1794262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1778750-1794262:1:exon

GPATCH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: GPATCH1
product: G-patch domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033069728.2
SIO_010081: GPATCH1
subclass of: SO_0000673
so part of: GPATCH1
location: join(1778750..1778866,1779791..1779925,1780288..1780373,1780776..1780936,1781271..1781368,1781491..1781549,1781874..1782119,1782991..1783138,1783859..1783938,1784947..1785151,1785753..1786040,1787756..1787937,1788200..1788327,1788592..1788725,1789053..1789222,1789849..1790056,1790727..1790837,1792108..1792232,1792749..1792894,1793977..1794262)
location: region:1778750-1794262:1
so has part: feature:1778750-1778866:1:exon
so has part: feature:1779791-1779925:1:exon
so has part: feature:1780288-1780373:1:exon
so has part: feature:1780776-1780936:1:exon
so has part: feature:1781271-1781368:1:exon
so has part: feature:1781491-1781549:1:exon
so has part: feature:1781874-1782119:1:exon
so has part: feature:1782991-1783138:1:exon
so has part: feature:1783859-1783938:1:exon
so has part: feature:1784947-1785151:1:exon
so has part: feature:1785753-1786040:1:exon
so has part: feature:1787756-1787937:1:exon
so has part: feature:1788200-1788327:1:exon
so has part: feature:1788592-1788725:1:exon
so has part: feature:1789053-1789222:1:exon
so has part: feature:1789849-1790056:1:exon
so has part: feature:1790727-1790837:1:exon
so has part: feature:1792108-1792232:1:exon
so has part: feature:1792749-1792894:1:exon
so has part: feature:1793977-1794262:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1778750-1778866:1:exon

position:1778866:1
position: 1778866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1779791-1779925:1:exon

position:1779791:1
position: 1779791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1779925:1
position: 1779925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1780288-1780373:1:exon

position:1780288:1
position: 1780288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1780373:1
position: 1780373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1780776-1780936:1:exon

position:1780776:1
position: 1780776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1780936:1
position: 1780936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1781271-1781368:1:exon

position:1781271:1
position: 1781271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1781368:1
position: 1781368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1781491-1781549:1:exon

position:1781491:1
position: 1781491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1781549:1
position: 1781549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1781874-1782119:1:exon

position:1781874:1
position: 1781874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1782119:1
position: 1782119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1782991-1783138:1:exon

position:1782991:1
position: 1782991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1783138:1
position: 1783138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1783859-1783938:1:exon

position:1783859:1
position: 1783859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1783938:1
position: 1783938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1784947-1785151:1:exon

position:1784947:1
position: 1784947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1785151:1
position: 1785151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1785753-1786040:1:exon

position:1785753:1
position: 1785753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1786040:1
position: 1786040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1787756-1787937:1:exon

position:1787756:1
position: 1787756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1787937:1
position: 1787937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1788200-1788327:1:exon

position:1788200:1
position: 1788200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1788327:1
position: 1788327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1788592-1788725:1:exon

position:1788592:1
position: 1788592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1788725:1
position: 1788725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1789053-1789222:1:exon

position:1789053:1
position: 1789053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1789222:1
position: 1789222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1789849-1790056:1:exon

position:1789849:1
position: 1789849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1790056:1
position: 1790056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1790727-1790837:1:exon

position:1790727:1
position: 1790727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1790837:1
position: 1790837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1792108-1792232:1:exon

position:1792108:1
position: 1792108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1792232:1
position: 1792232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1792749-1792894:1:exon

position:1792749:1
position: 1792749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1792894:1
position: 1792894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1793977-1794262:1:exon

position:1793977:1
position: 1793977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GPATCH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: GPATCH1
product: G-patch domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_033069727.2
SIO_010081: GPATCH1
subclass of: SO_0000673
so part of: GPATCH1
location: join(1778750..1778866,1779791..1779925,1780288..1780373,1780776..1780936,1781271..1781368,1781491..1781549,1781874..1782119,1782991..1783138,1783859..1783938,1784947..1785151,1785753..1786040,1787756..1787937,1788200..1788327,1788592..1788725,1789053..1789222,1789846..1790056,1790727..1790837,1792108..1792232,1792749..1792894,1793977..1794261)
location: region:1778750-1794261:1
so has part: feature:1778750-1778866:1:exon
so has part: feature:1779791-1779925:1:exon
so has part: feature:1780288-1780373:1:exon
so has part: feature:1780776-1780936:1:exon
so has part: feature:1781271-1781368:1:exon
so has part: feature:1781491-1781549:1:exon
so has part: feature:1781874-1782119:1:exon
so has part: feature:1782991-1783138:1:exon
so has part: feature:1783859-1783938:1:exon
so has part: feature:1784947-1785151:1:exon
so has part: feature:1785753-1786040:1:exon
so has part: feature:1787756-1787937:1:exon
so has part: feature:1788200-1788327:1:exon
so has part: feature:1788592-1788725:1:exon
so has part: feature:1789053-1789222:1:exon
so has part: feature:1789846-1790056:1:exon
so has part: feature:1790727-1790837:1:exon
so has part: feature:1792108-1792232:1:exon
so has part: feature:1792749-1792894:1:exon
so has part: feature:1793977-1794261:1:exon

position:1794261:1
position: 1794261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1778750-1778866:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1779791-1779925:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1780288-1780373:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1780776-1780936:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1781271-1781368:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1781491-1781549:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1781874-1782119:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1782991-1783138:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1783859-1783938:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1784947-1785151:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1785753-1786040:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1787756-1787937:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1788200-1788327:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1788592-1788725:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1789053-1789222:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1789846-1790056:1:exon

position:1789846:1
position: 1789846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1790727-1790837:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1792108-1792232:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1792749-1792894:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1793977-1794261:1:exon

GPATCH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: GPATCH1
product: G-patch domain containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033069730.2
SIO_010081: GPATCH1
subclass of: SO_0000673
so part of: GPATCH1
location: join(1778751..1778829,1779791..1779925,1780288..1780373,1780776..1780936,1781271..1781368,1781491..1781549,1781874..1782119,1782991..1783138,1783859..1783938,1784947..1785151,1785753..1786040,1787756..1787937,1788200..1788327,1788592..1788725,1789053..1789222,1789846..1790056,1790727..1790837,1792108..1792232,1792749..1792894,1793977..1794254)
location: region:1778751-1794254:1
so has part: feature:1778751-1778829:1:exon
so has part: feature:1779791-1779925:1:exon
so has part: feature:1780288-1780373:1:exon
so has part: feature:1780776-1780936:1:exon
so has part: feature:1781271-1781368:1:exon
so has part: feature:1781491-1781549:1:exon
so has part: feature:1781874-1782119:1:exon
so has part: feature:1782991-1783138:1:exon
so has part: feature:1783859-1783938:1:exon
so has part: feature:1784947-1785151:1:exon
so has part: feature:1785753-1786040:1:exon
so has part: feature:1787756-1787937:1:exon
so has part: feature:1788200-1788327:1:exon
so has part: feature:1788592-1788725:1:exon
so has part: feature:1789053-1789222:1:exon
so has part: feature:1789846-1790056:1:exon
so has part: feature:1790727-1790837:1:exon
so has part: feature:1792108-1792232:1:exon
so has part: feature:1792749-1792894:1:exon
so has part: feature:1793977-1794254:1:exon

position:1778751:1
position: 1778751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1794254:1
position: 1794254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1778751-1778829:1:exon

position:1778829:1
position: 1778829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1779791-1779925:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1780288-1780373:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1780776-1780936:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1781271-1781368:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1781491-1781549:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1781874-1782119:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1782991-1783138:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1783859-1783938:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1784947-1785151:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1785753-1786040:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1787756-1787937:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1788200-1788327:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1788592-1788725:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1789053-1789222:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1789846-1790056:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1790727-1790837:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1792108-1792232:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1792749-1792894:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1793977-1794254:1:exon

GPATCH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: GPATCH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain-containing protein 1 isoform X1
translation: MAAAESSDSEEEDLVSYGSALQPLQEGERIKKPVPLQEQTVKDAKGRYQRFHGAFTGGFSAGYFNTVGTKEGWTPSAFVSSRQKRADRTTLGPEDFMDEEDLSEFGIAPKDITTTDDFASKAKDRIKEKARQIAGVIAPIPGTTAFDDLIGPSKITVGVELLRKMGWKEGQGIGPRVKRKPCRQKPDPTVKIYGCALPPGLSEGSEDEEDEYQPENVTFAPKDVMPVDLTPKENVHGLGYKGLDPSQALFGASGREHLNLFTGGSEETSNLLGDLRHSKGRKLGITGQAFGVGALEEEDDDIYATDTLSKYDTVLKDEEPGDGLYGWTAPKQYKSKKRPERDFKYIGKVLAGFSLASKSSAPVKIYPPPSLPRNYRPFHYFRPVLVAGNENCHLQKALQESTGKLESGPAHQSRHALNAAQRREQLGETELKGPAPSILEYLCEKDRERLKEVKQASEQQMKAKMESQQAANSRLQSASPEDAALKWRTLLEGQLADAGSSDFKPFAKNPEKQKRYENFVKSLKQGEKVETLERFLDPNMTEWERGREQEEFCRAAMFYRSSNSTLSSRFTRAKYEDDVDKVEVPRDQENDIDDKETAVKMKMFGKLTRDTFEWHPDKLLCKRFNVRDPYPDSSVVGLPKVKRDKYSVFNFLTVPEPTTSVTQATTKKIQESNSVNKPKKSSRWDVSDKEKEKKDSISEFISLARSKAENQQQPPVPATEQCGTGTTESLPTVQVADEDKNREEESGRPPMDLFKAIFVSSSDEKSSSSEEESDEEQQPTTSERQSETTKQVDMPDSSSSNLQGTVTATTDPGISSLPASKRELDATEEFGPKLPPAFSSGTTWQQQTVVPATFPGPSRKEKHRKIRERHKTKKERKRKKEKKKKHKKQKNKGKHKNKKSEKDSSSDTTDSSDSLSDMDTTGLSPKELLRRLKQLQH
SIO_010081: GPATCH1
subclass of: SO_0000673
so part of: GPATCH1
location: join(1778788..1778866,1779791..1779925,1780288..1780373,1780776..1780936,1781271..1781368,1781491..1781549,1781874..1782119,1782991..1783138,1783859..1783938,1784947..1785151,1785753..1786040,1787756..1787937,1788200..1788327,1788592..1788725,1789053..1789222,1789846..1790056,1790727..1790837,1792108..1792232,1792749..1792894,1793977..1793998)
location: region:1778788-1793998:1
so has part: feature:1778788-1778866:1:exon
so has part: feature:1779791-1779925:1:exon
so has part: feature:1780288-1780373:1:exon
so has part: feature:1780776-1780936:1:exon
so has part: feature:1781271-1781368:1:exon
so has part: feature:1781491-1781549:1:exon
so has part: feature:1781874-1782119:1:exon
so has part: feature:1782991-1783138:1:exon
so has part: feature:1783859-1783938:1:exon
so has part: feature:1784947-1785151:1:exon
so has part: feature:1785753-1786040:1:exon
so has part: feature:1787756-1787937:1:exon
so has part: feature:1788200-1788327:1:exon
so has part: feature:1788592-1788725:1:exon
so has part: feature:1789053-1789222:1:exon
so has part: feature:1789846-1790056:1:exon
so has part: feature:1790727-1790837:1:exon
so has part: feature:1792108-1792232:1:exon
so has part: feature:1792749-1792894:1:exon
so has part: feature:1793977-1793998:1:exon

XP_032925618.1
type: Protein
SIO_000068: ncbiprotein

position:1778788:1
position: 1778788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1793998:1
position: 1793998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1778788-1778866:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1779791-1779925:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1780288-1780373:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1780776-1780936:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1781271-1781368:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1781491-1781549:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1781874-1782119:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1782991-1783138:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1783859-1783938:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1784947-1785151:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1785753-1786040:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1787756-1787937:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1788200-1788327:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1788592-1788725:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1789053-1789222:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1789846-1790056:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1790727-1790837:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1792108-1792232:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1792749-1792894:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1793977-1793998:1:exon

GPATCH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: GPATCH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain-containing protein 1 isoform X2
translation: MAAAESSDSEEEDLVSYGSALQPLQEGERIKKPVPLQEQTVKDAKGRYQRFHGAFTGGFSAGYFNTVGTKEGWTPSAFVSSRQKRADRTTLGPEDFMDEEDLSEFGIAPKDITTTDDFASKAKDRIKEKARQIAGVIAPIPGTTAFDDLIGPSKITVGVELLRKMGWKEGQGIGPRVKRKPCRQKPDPTVKIYGCALPPGLSEGSEDEEDEYQPENVTFAPKDVMPVDLTPKENVHGLGYKGLDPSQALFGASGREHLNLFTGGSEETSNLLGDLRHSKGRKLGITGQAFGVGALEEEDDDIYATDTLSKYDTVLKDEEPGDGLYGWTAPKQYKSKKRPERDFKYIGKVLAGFSLASKSSAPVKIYPPPSLPRNYRPFHYFRPVLVAGNENCHLQKALQESTGKLESGPAHQSRHALNAAQRREQLGETELKGPAPSILEYLCEKDRERLKEVKQASEQQMKAKMESQQAANSRLQSASPEDAALKWRTLLEGQLADAGSSDFKPFAKNPEKQKRYENFVKSLKQGEKVETLERFLDPNMTEWERGREQEEFCRAAMFYRSSNSTLSSRFTRAKYEDDVDKVEVPRDQENDIDDKETAVKMKMFGKLTRDTFEWHPDKLLCKRFNVRDPYPDSSVVGLPKVKRDKYSVFNFLTVPEPTTSVTQATTKKIQESNSVNKPKKSSRWDVSDKEKEKKDSISEFISLARSKAENQQQPPVPATEQCGTGTTESLPTVVADEDKNREEESGRPPMDLFKAIFVSSSDEKSSSSEEESDEEQQPTTSERQSETTKQVDMPDSSSSNLQGTVTATTDPGISSLPASKRELDATEEFGPKLPPAFSSGTTWQQQTVVPATFPGPSRKEKHRKIRERHKTKKERKRKKEKKKKHKKQKNKGKHKNKKSEKDSSSDTTDSSDSLSDMDTTGLSPKELLRRLKQLQH
SIO_010081: GPATCH1
subclass of: SO_0000673
so part of: GPATCH1
location: join(1778788..1778866,1779791..1779925,1780288..1780373,1780776..1780936,1781271..1781368,1781491..1781549,1781874..1782119,1782991..1783138,1783859..1783938,1784947..1785151,1785753..1786040,1787756..1787937,1788200..1788327,1788592..1788725,1789053..1789222,1789849..1790056,1790727..1790837,1792108..1792232,1792749..1792894,1793977..1793998)
location: region:1778788-1793998:1
so has part: feature:1778788-1778866:1:exon
so has part: feature:1779791-1779925:1:exon
so has part: feature:1780288-1780373:1:exon
so has part: feature:1780776-1780936:1:exon
so has part: feature:1781271-1781368:1:exon
so has part: feature:1781491-1781549:1:exon
so has part: feature:1781874-1782119:1:exon
so has part: feature:1782991-1783138:1:exon
so has part: feature:1783859-1783938:1:exon
so has part: feature:1784947-1785151:1:exon
so has part: feature:1785753-1786040:1:exon
so has part: feature:1787756-1787937:1:exon
so has part: feature:1788200-1788327:1:exon
so has part: feature:1788592-1788725:1:exon
so has part: feature:1789053-1789222:1:exon
so has part: feature:1789849-1790056:1:exon
so has part: feature:1790727-1790837:1:exon
so has part: feature:1792108-1792232:1:exon
so has part: feature:1792749-1792894:1:exon
so has part: feature:1793977-1793998:1:exon

XP_032925619.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1778788-1778866:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1779791-1779925:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1780288-1780373:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1780776-1780936:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1781271-1781368:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1781491-1781549:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1781874-1782119:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1782991-1783138:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1783859-1783938:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1784947-1785151:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1785753-1786040:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1787756-1787937:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1788200-1788327:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1788592-1788725:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1789053-1789222:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1789849-1790056:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1790727-1790837:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1792108-1792232:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1792749-1792894:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1793977-1793998:1:exon

GPATCH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: GPATCH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain-containing protein 1 isoform X3
translation: MDEEDLSEFGIAPKDITTTDDFASKAKDRIKEKARQIAGVIAPIPGTTAFDDLIGPSKITVGVELLRKMGWKEGQGIGPRVKRKPCRQKPDPTVKIYGCALPPGLSEGSEDEEDEYQPENVTFAPKDVMPVDLTPKENVHGLGYKGLDPSQALFGASGREHLNLFTGGSEETSNLLGDLRHSKGRKLGITGQAFGVGALEEEDDDIYATDTLSKYDTVLKDEEPGDGLYGWTAPKQYKSKKRPERDFKYIGKVLAGFSLASKSSAPVKIYPPPSLPRNYRPFHYFRPVLVAGNENCHLQKALQESTGKLESGPAHQSRHALNAAQRREQLGETELKGPAPSILEYLCEKDRERLKEVKQASEQQMKAKMESQQAANSRLQSASPEDAALKWRTLLEGQLADAGSSDFKPFAKNPEKQKRYENFVKSLKQGEKVETLERFLDPNMTEWERGREQEEFCRAAMFYRSSNSTLSSRFTRAKYEDDVDKVEVPRDQENDIDDKETAVKMKMFGKLTRDTFEWHPDKLLCKRFNVRDPYPDSSVVGLPKVKRDKYSVFNFLTVPEPTTSVTQATTKKIQESNSVNKPKKSSRWDVSDKEKEKKDSISEFISLARSKAENQQQPPVPATEQCGTGTTESLPTVQVADEDKNREEESGRPPMDLFKAIFVSSSDEKSSSSEEESDEEQQPTTSERQSETTKQVDMPDSSSSNLQGTVTATTDPGISSLPASKRELDATEEFGPKLPPAFSSGTTWQQQTVVPATFPGPSRKEKHRKIRERHKTKKERKRKKEKKKKHKKQKNKGKHKNKKSEKDSSSDTTDSSDSLSDMDTTGLSPKELLRRLKQLQH
SIO_010081: GPATCH1
subclass of: SO_0000673
so part of: GPATCH1
location: join(1780362..1780373,1780776..1780936,1781271..1781368,1781491..1781549,1781874..1782119,1782991..1783138,1783859..1783938,1784947..1785151,1785753..1786040,1787756..1787937,1788200..1788327,1788592..1788725,1789053..1789222,1789846..1790056,1790727..1790837,1792108..1792232,1792749..1792894,1793977..1793998)
location: region:1780362-1793998:1
so has part: feature:1780362-1780373:1:exon
so has part: feature:1780776-1780936:1:exon
so has part: feature:1781271-1781368:1:exon
so has part: feature:1781491-1781549:1:exon
so has part: feature:1781874-1782119:1:exon
so has part: feature:1782991-1783138:1:exon
so has part: feature:1783859-1783938:1:exon
so has part: feature:1784947-1785151:1:exon
so has part: feature:1785753-1786040:1:exon
so has part: feature:1787756-1787937:1:exon
so has part: feature:1788200-1788327:1:exon
so has part: feature:1788592-1788725:1:exon
so has part: feature:1789053-1789222:1:exon
so has part: feature:1789846-1790056:1:exon
so has part: feature:1790727-1790837:1:exon
so has part: feature:1792108-1792232:1:exon
so has part: feature:1792749-1792894:1:exon
so has part: feature:1793977-1793998:1:exon

XP_032925621.1
type: Protein
SIO_000068: ncbiprotein

position:1780362:1
position: 1780362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1780362-1780373:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1780776-1780936:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1781271-1781368:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1781491-1781549:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1781874-1782119:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1782991-1783138:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1783859-1783938:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1784947-1785151:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1785753-1786040:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1787756-1787937:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1788200-1788327:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1788592-1788725:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1789053-1789222:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1789846-1790056:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1790727-1790837:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1792108-1792232:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1792749-1792894:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1793977-1793998:1:exon

TRNAT-AGU
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: TRNAT-AGU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1802043..1802116
location: region:1802043-1802116:1
so has part: feature:1802043-1802116:1:exon
subclass of: SO_0000663

117001710
type: Gene
SIO_000068: ncbigene

position:1802043:1
position: 1802043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1802116:1
position: 1802116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1802043-1802116:1:exon

TRNAT-AGU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 91951
gene: TRNAT-AGU
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA threonine (anticodon AGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1802077..1802079,aa:Thr,seq:agt)
SIO_010081: TRNAT-AGU
subclass of: SO_0000673
so part of: TRNAT-AGU
location: 1802043..1802116
location: region:1802043-1802116:1
so has part: feature:1802043-1802116:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1802043-1802116:1:exon

LRP3
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LRP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1825584..1850857
location: region:1825584-1850857:1
so has part: feature:1825584-1850857:1:exon
subclass of: SO_0000010

117001463
type: Gene
SIO_000068: ncbigene

position:1825584:1
position: 1825584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1850857:1
position: 1850857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1825584-1850857:1:exon

LRP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LRP3
product: LDL receptor related protein 3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069836.1
SIO_010081: LRP3
subclass of: SO_0000673
so part of: LRP3
location: join(1825584..1825711,1832097..1832144,1838272..1838410,1846281..1846489,1846779..1847865,1848965..1849097,1850038..1850857)
location: region:1825584-1850857:1
so has part: feature:1825584-1825711:1:exon
so has part: feature:1832097-1832144:1:exon
so has part: feature:1838272-1838410:1:exon
so has part: feature:1846281-1846489:1:exon
so has part: feature:1846779-1847865:1:exon
so has part: feature:1848965-1849097:1:exon
so has part: feature:1850038-1850857:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1825584-1825711:1:exon

position:1825711:1
position: 1825711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1832097-1832144:1:exon

position:1832097:1
position: 1832097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1832144:1
position: 1832144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1838272-1838410:1:exon

position:1838272:1
position: 1838272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1838410:1
position: 1838410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1846281-1846489:1:exon

position:1846281:1
position: 1846281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1846489:1
position: 1846489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1846779-1847865:1:exon

position:1846779:1
position: 1846779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1847865:1
position: 1847865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1848965-1849097:1:exon

position:1848965:1
position: 1848965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1849097:1
position: 1849097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1850038-1850857:1:exon

position:1850038:1
position: 1850038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LRP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LRP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: low-density lipoprotein receptor-related protein 3
translation: MEKAAAAELRQGALAPLTAICLVNLFLTGKIESAVTSLAACSGELEQHTERRGVIYSPSWPSNYPPAINCSWYIQGDHGEMITISFKNFDLEDSQKCAVDWLMIGPSSKREEYKVCGSSIPPSFISARDHVWIFFHSDASSSGQAQGFRLSYIRGKIGQSVCQSDEFRCANGKCIPSTWKCNSMDECGDNSDERNCTVPSTDPPSSICPSGMFQCSAAHSTKCLMNELRCNSVKDCGDGSDEDNCPDLSCGKRLGNFYGSFASPDLFRADHSRSDLRCTWYVDTQDNRHVLLQLDLQLGYNDYVKVYDGIGERGDKLMQTFSHHNNRHSVSVESSKGQLTVSYHARSKSTGHGFNATYQVKGYCLPWEHPCGSDEECFTDKQHCDGWWHCPNGKDEENCPACQKNEYPCEGNSGLCYSILDRCNNQKNCPDGSDEKNCFTCQPGNFHCGTNLCIFETWRCDGQEDCQDGSDERNCLVIVPRKVITAALIGSLVCGLLLVIALGCAFKLYSLRTREYRAFETQMTRLEAEFVRREAPPSYGQLIAQGLIPPVEDFPVYNASQASVLQNIRTAMRRQMRRHSSRRSSSRRRLGRLWSRLFHRPRVRGQIPLLTPARTSQTTLGDGIIRSAGGTAGSPPPSPEGPGSEANGQARGSQDTGCSSLQSETEMTEPSPSTTCQPNTCTAAHAEPEAGHTNKSLSADSDRELKQSSKADPGKAFRDPLSESVTETIHGGSVSRRTVPEDSSLSGSHPLSEDPCRLPLKMWESGYPDSSMNVRIQVNGQNHSYQEEPLGVHAAGCHSVEVPMLQSSTSLSENSTSDDESLLVC
SIO_010081: LRP3
subclass of: SO_0000673
so part of: LRP3
location: join(1825645..1825711,1832097..1832144,1838272..1838410,1846281..1846489,1846779..1847865,1848965..1849097,1850038..1850832)
location: region:1825645-1850832:1
so has part: feature:1825645-1825711:1:exon
so has part: feature:1832097-1832144:1:exon
so has part: feature:1838272-1838410:1:exon
so has part: feature:1846281-1846489:1:exon
so has part: feature:1846779-1847865:1:exon
so has part: feature:1848965-1849097:1:exon
so has part: feature:1850038-1850832:1:exon

XP_032925727.1
type: Protein
SIO_000068: ncbiprotein

position:1825645:1
position: 1825645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1850832:1
position: 1850832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1825645-1825711:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1832097-1832144:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1838272-1838410:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1846281-1846489:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1846779-1847865:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1848965-1849097:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1850038-1850832:1:exon

SLC7A10
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: SLC7A10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1859042..1902021)
location: region:1859042-1902021:-1
so has part: feature:1859042-1902021:-1:exon
subclass of: SO_0000010

117001464
type: Gene
SIO_000068: ncbigene

position:1859042:-1
position: 1859042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1902021:-1
position: 1902021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1859042-1902021:-1:exon

SLC7A10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SLC7A10
product: solute carrier family 7 member 10, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069839.1
SIO_010081: SLC7A10
subclass of: SO_0000673
so part of: SLC7A10
location: complement(join(1859042..1861079,1862235..1862412,1862660..1862809,1868003..1868099,1869110..1869213,1869310..1869433,1871060..1871213,1872805..1872930,1873649..1873800,1880812..1881016,1901907..1902021))
location: region:1859042-1902021:-1
so has part: feature:1901907-1902021:-1:exon
so has part: feature:1880812-1881016:-1:exon
so has part: feature:1873649-1873800:-1:exon
so has part: feature:1872805-1872930:-1:exon
so has part: feature:1871060-1871213:-1:exon
so has part: feature:1869310-1869433:-1:exon
so has part: feature:1869110-1869213:-1:exon
so has part: feature:1868003-1868099:-1:exon
so has part: feature:1862660-1862809:-1:exon
so has part: feature:1862235-1862412:-1:exon
so has part: feature:1859042-1861079:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1901907-1902021:-1:exon

position:1901907:-1
position: 1901907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1880812-1881016:-1:exon

position:1880812:-1
position: 1880812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1881016:-1
position: 1881016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1873649-1873800:-1:exon

position:1873649:-1
position: 1873649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1873800:-1
position: 1873800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1872805-1872930:-1:exon

position:1872805:-1
position: 1872805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1872930:-1
position: 1872930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1871060-1871213:-1:exon

position:1871060:-1
position: 1871060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1871213:-1
position: 1871213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1869310-1869433:-1:exon

position:1869310:-1
position: 1869310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1869433:-1
position: 1869433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1869110-1869213:-1:exon

position:1869110:-1
position: 1869110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1869213:-1
position: 1869213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1868003-1868099:-1:exon

position:1868003:-1
position: 1868003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1868099:-1
position: 1868099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1862660-1862809:-1:exon

position:1862660:-1
position: 1862660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1862809:-1
position: 1862809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1862235-1862412:-1:exon

position:1862235:-1
position: 1862235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1862412:-1
position: 1862412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1859042-1861079:-1:exon

position:1861079:-1
position: 1861079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC7A10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SLC7A10
product: solute carrier family 7 member 10, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069838.1
SIO_010081: SLC7A10
subclass of: SO_0000673
so part of: SLC7A10
location: complement(join(1859042..1861079,1862235..1862412,1862660..1862809,1868003..1868099,1871060..1871213,1872805..1872930,1873649..1873800,1880812..1881016,1901907..1902015))
location: region:1859042-1902015:-1
so has part: feature:1901907-1902015:-1:exon
so has part: feature:1880812-1881016:-1:exon
so has part: feature:1873649-1873800:-1:exon
so has part: feature:1872805-1872930:-1:exon
so has part: feature:1871060-1871213:-1:exon
so has part: feature:1868003-1868099:-1:exon
so has part: feature:1862660-1862809:-1:exon
so has part: feature:1862235-1862412:-1:exon
so has part: feature:1859042-1861079:-1:exon

position:1902015:-1
position: 1902015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1901907-1902015:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1880812-1881016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1873649-1873800:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1872805-1872930:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1871060-1871213:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1868003-1868099:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1862660-1862809:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1862235-1862412:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1859042-1861079:-1:exon

SLC7A10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SLC7A10
product: solute carrier family 7 member 10, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069837.1
SIO_010081: SLC7A10
subclass of: SO_0000673
so part of: SLC7A10
location: complement(join(1859042..1861079,1862235..1862412,1862660..1862809,1868003..1868099,1869110..1869213,1869696..1869774,1871060..1871213,1872805..1872930,1873649..1873800,1880812..1881016,1901907..1902015))
location: region:1859042-1902015:-1
so has part: feature:1901907-1902015:-1:exon
so has part: feature:1880812-1881016:-1:exon
so has part: feature:1873649-1873800:-1:exon
so has part: feature:1872805-1872930:-1:exon
so has part: feature:1871060-1871213:-1:exon
so has part: feature:1869696-1869774:-1:exon
so has part: feature:1869110-1869213:-1:exon
so has part: feature:1868003-1868099:-1:exon
so has part: feature:1862660-1862809:-1:exon
so has part: feature:1862235-1862412:-1:exon
so has part: feature:1859042-1861079:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1901907-1902015:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1880812-1881016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1873649-1873800:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1872805-1872930:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1871060-1871213:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1869696-1869774:-1:exon

position:1869696:-1
position: 1869696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1869774:-1
position: 1869774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1869110-1869213:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1868003-1868099:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1862660-1862809:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1862235-1862412:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1859042-1861079:-1:exon

SLC7A10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SLC7A10
product: solute carrier family 7 member 10, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069841.1
SIO_010081: SLC7A10
subclass of: SO_0000673
so part of: SLC7A10
location: complement(join(1859042..1861079,1862235..1862412,1862660..1862809,1868003..1868099,1869110..1869213,1869310..1869433,1871060..1871213,1872805..1872930,1873649..1873800,1880812..1881016,1901303..1901320))
location: region:1859042-1901320:-1
so has part: feature:1901303-1901320:-1:exon
so has part: feature:1880812-1881016:-1:exon
so has part: feature:1873649-1873800:-1:exon
so has part: feature:1872805-1872930:-1:exon
so has part: feature:1871060-1871213:-1:exon
so has part: feature:1869310-1869433:-1:exon
so has part: feature:1869110-1869213:-1:exon
so has part: feature:1868003-1868099:-1:exon
so has part: feature:1862660-1862809:-1:exon
so has part: feature:1862235-1862412:-1:exon
so has part: feature:1859042-1861079:-1:exon

position:1901320:-1
position: 1901320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1901303-1901320:-1:exon

position:1901303:-1
position: 1901303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1880812-1881016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1873649-1873800:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1872805-1872930:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1871060-1871213:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1869310-1869433:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1869110-1869213:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1868003-1868099:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1862660-1862809:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1862235-1862412:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1859042-1861079:-1:exon

SLC7A10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SLC7A10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: asc-type amino acid transporter 1 isoform X2
translation: MAGGEQRAPGGPERVALKKEIGLVSACAIIIGNIIGSGIFISPKGVLEHAGSVGLALIVWVLGGGVAALGSLCYAELGVTIPRSGGDYSYVTEIFGGLAGFLLLWSAVLIMYPTSLAVIALTFSNYVLQPVFPNCIPPYNASRILSMLCLLLLTWVNSSSVRWATRIQDIFTAGKLLALTLIIIVGFMQIFKGNYKELTPSNAFRFWMTPSVGHLALAFLQGSFAFSGWNFLNYVTEELVDPRRLCFSGAREGHLPSLLAMIHVKNCTPIPALLLCCLATLIIMLVGDTYTLINYVSFINYLCYGVTIMGLIVLRWKKPKIFRPIKVNLLIPITYLAFWAFLLAFSLYSEPVVCGVGLIIILTGVPVFFLGVYWRNKPKCINRLIESMTCWGQKLCFVVYPQCGSVEEEASSAHSWRLGSETAVRK
SIO_010081: SLC7A10
subclass of: SO_0000673
so part of: SLC7A10
location: complement(join(1860955..1861079,1862235..1862412,1862660..1862809,1868003..1868099,1871060..1871213,1872805..1872930,1873649..1873800,1880812..1881016,1901907..1902000))
location: region:1860955-1902000:-1
so has part: feature:1901907-1902000:-1:exon
so has part: feature:1880812-1881016:-1:exon
so has part: feature:1873649-1873800:-1:exon
so has part: feature:1872805-1872930:-1:exon
so has part: feature:1871060-1871213:-1:exon
so has part: feature:1868003-1868099:-1:exon
so has part: feature:1862660-1862809:-1:exon
so has part: feature:1862235-1862412:-1:exon
so has part: feature:1860955-1861079:-1:exon

XP_032925729.1
type: Protein
SIO_000068: ncbiprotein

position:1860955:-1
position: 1860955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1902000:-1
position: 1902000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1901907-1902000:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1880812-1881016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1873649-1873800:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1872805-1872930:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1871060-1871213:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1868003-1868099:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1862660-1862809:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1862235-1862412:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1860955-1861079:-1:exon

SLC7A10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SLC7A10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: asc-type amino acid transporter 1 isoform X3
translation: MAGGEQRAPGGPERVALKKEIGLVSACAIIIGNIIGSGIFISPKGVLEHAGSVGLALIVWVLGGGVAALGSLCYAELGVTIPRSGGDYSYVTEIFGGLAGFLLLWSAVLIMYPTSLAVIALTFSNYVLQPVFPNCIPPYNASRILSMLCLLLLTWVNSSSVRWATRIQDIFTAGKLLALTLIIIVGFMQIFKGNYKELTPSNAFRFWMTPSVGHLALAFLQGSFAFSGWNFLNYVTEELVDPRRNLPRAIFISIPLVTFVYTFTNIAYFTAMSPQELLSSNAVAVTFGEKLLGYFSWVMPVSVALSTFGGINGYLFTSSRLCFSGAREGHLPSLLAMIHVKNCTPIPALLLCCLATLIIMLVGDTYTLINYVSFINYLCYGVTIMGLIVLRWKKPKIFRPIKVNLLIPITYLAFWAFLLAFSLYSEPVVCGVGLIIILTGVPVFFLGVYWRNKPKCINRLIESMTCWGQKLCFVVYPQCGSVEEEASSAHSWRLGSETAVRK
SIO_010081: SLC7A10
subclass of: SO_0000673
so part of: SLC7A10
location: complement(join(1860955..1861079,1862235..1862412,1862660..1862809,1868003..1868099,1869110..1869213,1869310..1869433,1871060..1871213,1872805..1872930,1873649..1873800,1880812..1881016,1901907..1902000))
location: region:1860955-1902000:-1
so has part: feature:1901907-1902000:-1:exon
so has part: feature:1880812-1881016:-1:exon
so has part: feature:1873649-1873800:-1:exon
so has part: feature:1872805-1872930:-1:exon
so has part: feature:1871060-1871213:-1:exon
so has part: feature:1869310-1869433:-1:exon
so has part: feature:1869110-1869213:-1:exon
so has part: feature:1868003-1868099:-1:exon
so has part: feature:1862660-1862809:-1:exon
so has part: feature:1862235-1862412:-1:exon
so has part: feature:1860955-1861079:-1:exon

XP_032925730.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1901907-1902000:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1880812-1881016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1873649-1873800:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1872805-1872930:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1871060-1871213:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1869310-1869433:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1869110-1869213:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1868003-1868099:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1862660-1862809:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1862235-1862412:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1860955-1861079:-1:exon

SLC7A10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SLC7A10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: asc-type amino acid transporter 1 isoform X1
translation: MAGGEQRAPGGPERVALKKEIGLVSACAIIIGNIIGSGIFISPKGVLEHAGSVGLALIVWVLGGGVAALGSLCYAELGVTIPRSGGDYSYVTEIFGGLAGFLLLWSAVLIMYPTSLAVIALTFSNYVLQPVFPNCIPPYNASRILSMLCLLLLTWVNSSSVRWATRIQDIFTAGKLLALTLIIIVGFMQIFKGNYKELTPSNAFRFWMTPSVGHLALAFLQGSFAFSGWNFLNYVTEELVDPRRWRQSKTIYSTMVPVPSAFGKWMFHFLTFGEKLLGYFSWVMPVSVALSTFGGINGYLFTSSRLCFSGAREGHLPSLLAMIHVKNCTPIPALLLCCLATLIIMLVGDTYTLINYVSFINYLCYGVTIMGLIVLRWKKPKIFRPIKVNLLIPITYLAFWAFLLAFSLYSEPVVCGVGLIIILTGVPVFFLGVYWRNKPKCINRLIESMTCWGQKLCFVVYPQCGSVEEEASSAHSWRLGSETAVRK
SIO_010081: SLC7A10
subclass of: SO_0000673
so part of: SLC7A10
location: complement(join(1860955..1861079,1862235..1862412,1862660..1862809,1868003..1868099,1869110..1869213,1869696..1869774,1871060..1871213,1872805..1872930,1873649..1873800,1880812..1881016,1901907..1902000))
location: region:1860955-1902000:-1
so has part: feature:1901907-1902000:-1:exon
so has part: feature:1880812-1881016:-1:exon
so has part: feature:1873649-1873800:-1:exon
so has part: feature:1872805-1872930:-1:exon
so has part: feature:1871060-1871213:-1:exon
so has part: feature:1869696-1869774:-1:exon
so has part: feature:1869110-1869213:-1:exon
so has part: feature:1868003-1868099:-1:exon
so has part: feature:1862660-1862809:-1:exon
so has part: feature:1862235-1862412:-1:exon
so has part: feature:1860955-1861079:-1:exon

XP_032925728.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1901907-1902000:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1880812-1881016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1873649-1873800:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1872805-1872930:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1871060-1871213:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1869696-1869774:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1869110-1869213:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1868003-1868099:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1862660-1862809:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1862235-1862412:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1860955-1861079:-1:exon

SLC7A10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SLC7A10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: asc-type amino acid transporter 1 isoform X4
translation: MYPTSLAVIALTFSNYVLQPVFPNCIPPYNASRILSMLCLLLLTWVNSSSVRWATRIQDIFTAGKLLALTLIIIVGFMQIFKGNYKELTPSNAFRFWMTPSVGHLALAFLQGSFAFSGWNFLNYVTEELVDPRRNLPRAIFISIPLVTFVYTFTNIAYFTAMSPQELLSSNAVAVTFGEKLLGYFSWVMPVSVALSTFGGINGYLFTSSRLCFSGAREGHLPSLLAMIHVKNCTPIPALLLCCLATLIIMLVGDTYTLINYVSFINYLCYGVTIMGLIVLRWKKPKIFRPIKVNLLIPITYLAFWAFLLAFSLYSEPVVCGVGLIIILTGVPVFFLGVYWRNKPKCINRLIESMTCWGQKLCFVVYPQCGSVEEEASSAHSWRLGSETAVRK
SIO_010081: SLC7A10
subclass of: SO_0000673
so part of: SLC7A10
location: complement(join(1860955..1861079,1862235..1862412,1862660..1862809,1868003..1868099,1869110..1869213,1869310..1869433,1871060..1871213,1872805..1872930,1873649..1873769))
location: region:1860955-1873769:-1
so has part: feature:1873649-1873769:-1:exon
so has part: feature:1872805-1872930:-1:exon
so has part: feature:1871060-1871213:-1:exon
so has part: feature:1869310-1869433:-1:exon
so has part: feature:1869110-1869213:-1:exon
so has part: feature:1868003-1868099:-1:exon
so has part: feature:1862660-1862809:-1:exon
so has part: feature:1862235-1862412:-1:exon
so has part: feature:1860955-1861079:-1:exon

XP_032925732.1
type: Protein
SIO_000068: ncbiprotein

position:1873769:-1
position: 1873769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1873649-1873769:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1872805-1872930:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1871060-1871213:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1869310-1869433:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1869110-1869213:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1868003-1868099:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1862660-1862809:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1862235-1862412:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1860955-1861079:-1:exon

LOC117001535
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117001535
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1903165..2052303
location: region:1903165-2052303:1
so has part: feature:1903165-2052303:1:exon
subclass of: SO_0000010

117001535
type: Gene
SIO_000068: ncbigene

position:1903165:1
position: 1903165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2052303:1
position: 2052303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1903165-2052303:1:exon

LOC117001535
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117001535
product: uncharacterized LOC117001535
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033069954.1
SIO_010081: LOC117001535
subclass of: SO_0000673
so part of: LOC117001535
location: join(1903165..1903283,1953078..1953123,1955937..1956135,1970873..1971011,2050297..2050545,2051662..2051773,2051910..2052303)
location: region:1903165-2052303:1
so has part: feature:1903165-1903283:1:exon
so has part: feature:1953078-1953123:1:exon
so has part: feature:1955937-1956135:1:exon
so has part: feature:1970873-1971011:1:exon
so has part: feature:2050297-2050545:1:exon
so has part: feature:2051662-2051773:1:exon
so has part: feature:2051910-2052303:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1903165-1903283:1:exon

position:1903283:1
position: 1903283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1953078-1953123:1:exon

position:1953078:1
position: 1953078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1953123:1
position: 1953123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1955937-1956135:1:exon

position:1955937:1
position: 1955937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1956135:1
position: 1956135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1970873-1971011:1:exon

position:1970873:1
position: 1970873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1971011:1
position: 1971011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2050297-2050545:1:exon

position:2050297:1
position: 2050297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2050545:1
position: 2050545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2051662-2051773:1:exon

position:2051662:1
position: 2051662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2051773:1
position: 2051773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2051910-2052303:1:exon

position:2051910:1
position: 2051910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117001535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117001535
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117001535
translation: MQDKVALEYPPMRQNHSRPLSCNAFAMALGRQASSPGPAAWKGVLKPSSPTFCKRGHRFCTKLEVTWVMGEEKAAGLQGVMFRESVLGRTQMRGRDGQGTALKAGKGWDALCAILCDTGFMPGPFICLKHCRSRHKATPSSFAQKDVDAISLTIAWKNSTLWYLLKKKTGKRLLFMISKFSCLEKAFMFCLLFPATAAQVSIHVSAGWREE
SIO_010081: LOC117001535
subclass of: SO_0000673
so part of: LOC117001535
location: join(1956102..1956135,1970873..1971011,2050297..2050545,2051662..2051773,2051910..2052011)
location: region:1956102-2052011:1
so has part: feature:1956102-1956135:1:exon
so has part: feature:1970873-1971011:1:exon
so has part: feature:2050297-2050545:1:exon
so has part: feature:2051662-2051773:1:exon
so has part: feature:2051910-2052011:1:exon

XP_032925845.1
type: Protein
SIO_000068: ncbiprotein

position:1956102:1
position: 1956102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2052011:1
position: 2052011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1956102-1956135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1970873-1971011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2050297-2050545:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2051662-2051773:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2051910-2052011:1:exon

CEBPA
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: CEBPA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2095287..2097979)
location: region:2095287-2097979:-1
so has part: feature:2095287-2097979:-1:exon
subclass of: SO_0000010

117001701
type: Gene
SIO_000068: ncbigene

position:2095287:-1
position: 2095287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2097979:-1
position: 2097979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2095287-2097979:-1:exon

CEBPA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CEBPA
product: CCAAT enhancer binding protein alpha
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033070179.1
SIO_010081: CEBPA
subclass of: SO_0000673
so part of: CEBPA
location: complement(2095287..2097979)
location: region:2095287-2097979:-1
so has part: feature:2095287-2097979:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2095287-2097979:-1:exon

CEBPA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CEBPA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CCAAT/enhancer-binding protein alpha
translation: MEQANFYEVDSRPPMSSGQHHQLQTPLPGSTYSYREAPSAAAPAAGGAELGDICENENSIDISAYIDPAAFNDEFLADLFQHSKQQEKAKAILAGDFDFHTMHGAGAAASAPGHQPQHHQQPLFGCVAGYMDGKLDPLYERIAAPGLRPLVIKQEPREEEEVKSAALSALYPHHAPQQHPSHLQYQIAHCAQTTMHLQPGQPTPPPTPVPSPHHPHHPHPPGGLPPAGTLKMLPSDHRSKSKKTVDKNSNEYRVRRERNNIAVRKSRDKAKQRNVETQQKVLELTTDNERLRKRVEQLTRELETLRGIFRQLPESSLVKAMGSCA
SIO_010081: CEBPA
subclass of: SO_0000673
so part of: CEBPA
location: complement(2096673..2097650)
location: region:2096673-2097650:-1
so has part: feature:2096673-2097650:-1:exon

XP_032926070.1
type: Protein
SIO_000068: ncbiprotein

position:2096673:-1
position: 2096673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2097650:-1
position: 2097650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2096673-2097650:-1:exon

CEBPG
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: CEBPG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2117485..2124289
location: region:2117485-2124289:1
so has part: feature:2117485-2124289:1:exon
subclass of: SO_0000010

117001471
type: Gene
SIO_000068: ncbigene

position:2117485:1
position: 2117485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2124289:1
position: 2124289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2117485-2124289:1:exon

CEBPG
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 91951
gene: CEBPG
product: CCAAT enhancer binding protein gamma, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_004419058.2
SIO_010081: CEBPG
so part of: CEBPG
location: join(2117485..2117580,2122206..2124289)
location: region:2117485-2124289:1
so has part: feature:2117485-2117580:1:exon
so has part: feature:2122206-2124289:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2117485-2117580:1:exon

position:2117580:1
position: 2117580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2122206-2124289:1:exon

position:2122206:1
position: 2122206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CEBPG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CEBPG
product: CCAAT enhancer binding protein gamma, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069864.2
SIO_010081: CEBPG
subclass of: SO_0000673
so part of: CEBPG
location: join(2117909..2118065,2122206..2124289)
location: region:2117909-2124289:1
so has part: feature:2117909-2118065:1:exon
so has part: feature:2122206-2124289:1:exon

position:2117909:1
position: 2117909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2117909-2118065:1:exon

position:2118065:1
position: 2118065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2122206-2124289:1:exon

CEBPG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CEBPG
product: CCAAT enhancer binding protein gamma, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069863.2
SIO_010081: CEBPG
subclass of: SO_0000673
so part of: CEBPG
location: join(2118770..2121320,2122206..2124289)
location: region:2118770-2124289:1
so has part: feature:2118770-2121320:1:exon
so has part: feature:2122206-2124289:1:exon

position:2118770:1
position: 2118770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2118770-2121320:1:exon

position:2121320:1
position: 2121320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2122206-2124289:1:exon

CEBPG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CEBPG
product: CCAAT enhancer binding protein gamma, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069865.2
SIO_010081: CEBPG
subclass of: SO_0000673
so part of: CEBPG
location: join(2121381..2121401,2122206..2124289)
location: region:2121381-2124289:1
so has part: feature:2121381-2121401:1:exon
so has part: feature:2122206-2124289:1:exon

position:2121381:1
position: 2121381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2121381-2121401:1:exon

position:2121401:1
position: 2121401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2122206-2124289:1:exon

CEBPG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CEBPG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CCAAT/enhancer-binding protein gamma
translation: MSKTSQQNTTTDASGVSVIHTQAHSSGLQQVPQLVPVSPGGGGKAVPPSKQGKKNSFVDRNSDEYRQRRERNNMAVKKSRLKSKQKAQDTLQRVNQLKEENERLEAKIKLLTKELSVLKDLFLEHAHNFADNVQPVGTETTTTNPENSGQ
SIO_010081: CEBPG
subclass of: SO_0000673
so part of: CEBPG
location: 2122316..2122768
location: region:2122316-2122768:1
so has part: feature:2122316-2122768:1:exon

XP_032925754.1
type: Protein
SIO_000068: ncbiprotein

position:2122316:1
position: 2122316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2122768:1
position: 2122768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2122316-2122768:1:exon

CEBPG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CEBPG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CCAAT/enhancer-binding protein gamma
translation: MSKTSQQNTTTDASGVSVIHTQAHSSGLQQVPQLVPVSPGGGGKAVPPSKQGKKNSFVDRNSDEYRQRRERNNMAVKKSRLKSKQKAQDTLQRVNQLKEENERLEAKIKLLTKELSVLKDLFLEHAHNFADNVQPVGTETTTTNPENSGQ
SIO_010081: CEBPG
subclass of: SO_0000673
so part of: CEBPG
location: 2122316..2122768
location: region:2122316-2122768:1
so has part: feature:2122316-2122768:1:exon

XP_032925755.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2122316-2122768:1:exon

CEBPG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CEBPG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CCAAT/enhancer-binding protein gamma
translation: MSKTSQQNTTTDASGVSVIHTQAHSSGLQQVPQLVPVSPGGGGKAVPPSKQGKKNSFVDRNSDEYRQRRERNNMAVKKSRLKSKQKAQDTLQRVNQLKEENERLEAKIKLLTKELSVLKDLFLEHAHNFADNVQPVGTETTTTNPENSGQ
SIO_010081: CEBPG
subclass of: SO_0000673
so part of: CEBPG
location: 2122316..2122768
location: region:2122316-2122768:1
so has part: feature:2122316-2122768:1:exon

XP_032925756.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2122316-2122768:1:exon

PEPD
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: PEPD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2128610..2282478)
location: region:2128610-2282478:-1
so has part: feature:2128610-2282478:-1:exon
subclass of: SO_0000010

117001275
type: Gene
SIO_000068: ncbigene

position:2128610:-1
position: 2128610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2282478:-1
position: 2282478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2128610-2282478:-1:exon

PEPD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PEPD
product: peptidase D, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069465.1
SIO_010081: PEPD
subclass of: SO_0000673
so part of: PEPD
location: complement(join(2128610..2129251,2137140..2137331,2148611..2148795,2167656..2167804,2184000..2184077,2190673..2190741,2232086..2232132,2233492..2233567,2246463..2246507,2253681..2253742,2255290..2255337,2257342..2257405,2277129..2277312,2282403..2282478))
location: region:2128610-2282478:-1
so has part: feature:2282403-2282478:-1:exon
so has part: feature:2277129-2277312:-1:exon
so has part: feature:2257342-2257405:-1:exon
so has part: feature:2255290-2255337:-1:exon
so has part: feature:2253681-2253742:-1:exon
so has part: feature:2246463-2246507:-1:exon
so has part: feature:2233492-2233567:-1:exon
so has part: feature:2232086-2232132:-1:exon
so has part: feature:2190673-2190741:-1:exon
so has part: feature:2184000-2184077:-1:exon
so has part: feature:2167656-2167804:-1:exon
so has part: feature:2148611-2148795:-1:exon
so has part: feature:2137140-2137331:-1:exon
so has part: feature:2128610-2129251:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2282403-2282478:-1:exon

position:2282403:-1
position: 2282403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2277129-2277312:-1:exon

position:2277129:-1
position: 2277129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2277312:-1
position: 2277312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2257342-2257405:-1:exon

position:2257342:-1
position: 2257342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2257405:-1
position: 2257405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2255290-2255337:-1:exon

position:2255290:-1
position: 2255290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2255337:-1
position: 2255337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2253681-2253742:-1:exon

position:2253681:-1
position: 2253681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2253742:-1
position: 2253742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2246463-2246507:-1:exon

position:2246463:-1
position: 2246463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2246507:-1
position: 2246507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2233492-2233567:-1:exon

position:2233492:-1
position: 2233492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2233567:-1
position: 2233567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2232086-2232132:-1:exon

position:2232086:-1
position: 2232086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2232132:-1
position: 2232132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2190673-2190741:-1:exon

position:2190673:-1
position: 2190673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2190741:-1
position: 2190741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2184000-2184077:-1:exon

position:2184000:-1
position: 2184000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2184077:-1
position: 2184077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2167656-2167804:-1:exon

position:2167656:-1
position: 2167656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2167804:-1
position: 2167804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2148611-2148795:-1:exon

position:2148611:-1
position: 2148611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2148795:-1
position: 2148795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2137140-2137331:-1:exon

position:2137140:-1
position: 2137140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2137331:-1
position: 2137331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2128610-2129251:-1:exon

position:2129251:-1
position: 2129251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PEPD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PEPD
product: peptidase D, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069464.1
SIO_010081: PEPD
subclass of: SO_0000673
so part of: PEPD
location: complement(join(2128610..2129251,2137140..2137331,2148611..2148795,2167656..2167804,2184000..2184077,2190673..2190741,2232086..2232132,2233492..2233567,2246463..2246507,2253681..2253742,2255290..2255337,2257342..2257405,2275790..2275917,2277129..2277312,2282403..2282472))
location: region:2128610-2282472:-1
so has part: feature:2282403-2282472:-1:exon
so has part: feature:2277129-2277312:-1:exon
so has part: feature:2275790-2275917:-1:exon
so has part: feature:2257342-2257405:-1:exon
so has part: feature:2255290-2255337:-1:exon
so has part: feature:2253681-2253742:-1:exon
so has part: feature:2246463-2246507:-1:exon
so has part: feature:2233492-2233567:-1:exon
so has part: feature:2232086-2232132:-1:exon
so has part: feature:2190673-2190741:-1:exon
so has part: feature:2184000-2184077:-1:exon
so has part: feature:2167656-2167804:-1:exon
so has part: feature:2148611-2148795:-1:exon
so has part: feature:2137140-2137331:-1:exon
so has part: feature:2128610-2129251:-1:exon

position:2282472:-1
position: 2282472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2282403-2282472:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2277129-2277312:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2275790-2275917:-1:exon

position:2275790:-1
position: 2275790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2275917:-1
position: 2275917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2257342-2257405:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2255290-2255337:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2253681-2253742:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2246463-2246507:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2233492-2233567:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2232086-2232132:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2190673-2190741:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2184000-2184077:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2167656-2167804:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2148611-2148795:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2137140-2137331:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2128610-2129251:-1:exon

PEPD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PEPD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: xaa-Pro dipeptidase isoform X1
translation: MTAQGRRANMAAVEGPSYWLGNETLRVPAALFALNRRRLCERLRQNKDVQKNSIVLLQGGEETQRYCTDTGIVFRQESYFHWTFGVTEAGCFGAVDVDTGRSVLFVPQLPESYAVWMGKIHPPEFFKNKYAVDEAHYVTEISNVLALKKPAVLLTLRGVNTDSGNVSKEASFEGISQFNVNNKILHPEIAECRVIKTDMELEVLRYTNKISSEAHKEVMKAVKVGMKEYELESLFQHYCYTRGGMRHTSYTCICGSGENSSVLHYGHAGAPNDKTIEDGDLCLFDMGGEYYCYGSDITCTFPANGKFTADQRAVYEAVLKASRAVMKAIKPGVAWPDMHRLADRVHLEELTRIGILKGNVDDMLKVHLGAVFMPHGLGHLLGIDVHDVGGYPEGVERIDEPGLRSLRTARRLQQGMVLTIEPGVYFIEHLLEQALSDPAQACFINSSVLQRFRGFGGVRIEDDIVVTATGMELLTCVPRTVEEIEAFMAEGHSCAKSFGCLSSQKQ
SIO_010081: PEPD
subclass of: SO_0000673
so part of: PEPD
location: complement(join(2129102..2129251,2137140..2137331,2148611..2148795,2167656..2167804,2184000..2184077,2190673..2190741,2232086..2232132,2233492..2233567,2246463..2246507,2253681..2253742,2255290..2255337,2257342..2257405,2275790..2275917,2277129..2277312,2282403..2282446))
location: region:2129102-2282446:-1
so has part: feature:2282403-2282446:-1:exon
so has part: feature:2277129-2277312:-1:exon
so has part: feature:2275790-2275917:-1:exon
so has part: feature:2257342-2257405:-1:exon
so has part: feature:2255290-2255337:-1:exon
so has part: feature:2253681-2253742:-1:exon
so has part: feature:2246463-2246507:-1:exon
so has part: feature:2233492-2233567:-1:exon
so has part: feature:2232086-2232132:-1:exon
so has part: feature:2190673-2190741:-1:exon
so has part: feature:2184000-2184077:-1:exon
so has part: feature:2167656-2167804:-1:exon
so has part: feature:2148611-2148795:-1:exon
so has part: feature:2137140-2137331:-1:exon
so has part: feature:2129102-2129251:-1:exon

XP_032925355.1
type: Protein
SIO_000068: ncbiprotein

position:2129102:-1
position: 2129102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2282446:-1
position: 2282446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2282403-2282446:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2277129-2277312:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2275790-2275917:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2257342-2257405:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2255290-2255337:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2253681-2253742:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2246463-2246507:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2233492-2233567:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2232086-2232132:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2190673-2190741:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2184000-2184077:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2167656-2167804:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2148611-2148795:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2137140-2137331:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2129102-2129251:-1:exon

PEPD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PEPD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: xaa-Pro dipeptidase isoform X2
translation: MSRRTQLFCCRVEKKPRDTALILALCFARIHPPEFFKNKYAVDEAHYVTEISNVLALKKPAVLLTLRGVNTDSGNVSKEASFEGISQFNVNNKILHPEIAECRVIKTDMELEVLRYTNKISSEAHKEVMKAVKVGMKEYELESLFQHYCYTRGGMRHTSYTCICGSGENSSVLHYGHAGAPNDKTIEDGDLCLFDMGGEYYCYGSDITCTFPANGKFTADQRAVYEAVLKASRAVMKAIKPGVAWPDMHRLADRVHLEELTRIGILKGNVDDMLKVHLGAVFMPHGLGHLLGIDVHDVGGYPEGVERIDEPGLRSLRTARRLQQGMVLTIEPGVYFIEHLLEQALSDPAQACFINSSVLQRFRGFGGVRIEDDIVVTATGMELLTCVPRTVEEIEAFMAEGHSCAKSFGCLSSQKQ
SIO_010081: PEPD
subclass of: SO_0000673
so part of: PEPD
location: complement(join(2129102..2129251,2137140..2137331,2148611..2148795,2167656..2167804,2184000..2184077,2190673..2190741,2232086..2232132,2233492..2233567,2246463..2246507,2253681..2253742,2255290..2255337,2257342..2257405,2277129..2277214))
location: region:2129102-2277214:-1
so has part: feature:2277129-2277214:-1:exon
so has part: feature:2257342-2257405:-1:exon
so has part: feature:2255290-2255337:-1:exon
so has part: feature:2253681-2253742:-1:exon
so has part: feature:2246463-2246507:-1:exon
so has part: feature:2233492-2233567:-1:exon
so has part: feature:2232086-2232132:-1:exon
so has part: feature:2190673-2190741:-1:exon
so has part: feature:2184000-2184077:-1:exon
so has part: feature:2167656-2167804:-1:exon
so has part: feature:2148611-2148795:-1:exon
so has part: feature:2137140-2137331:-1:exon
so has part: feature:2129102-2129251:-1:exon

XP_032925356.1
type: Protein
SIO_000068: ncbiprotein

position:2277214:-1
position: 2277214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2277129-2277214:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2257342-2257405:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2255290-2255337:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2253681-2253742:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2246463-2246507:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2233492-2233567:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2232086-2232132:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2190673-2190741:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2184000-2184077:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2167656-2167804:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2148611-2148795:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2137140-2137331:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2129102-2129251:-1:exon

LOC117001276
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117001276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2211250..2214786
location: region:2211250-2214786:1
so has part: feature:2211250-2214786:1:exon
subclass of: SO_0000010

117001276
type: Gene
SIO_000068: ncbigene

position:2211250:1
position: 2211250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2214786:1
position: 2214786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2211250-2214786:1:exon

LOC117001276
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117001276
product: uncharacterized LOC117001276
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069466.2
SIO_010081: LOC117001276
subclass of: SO_0000673
so part of: LOC117001276
location: join(2211250..2213938,2214417..2214786)
location: region:2211250-2214786:1
so has part: feature:2211250-2213938:1:exon
so has part: feature:2214417-2214786:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2211250-2213938:1:exon

position:2213938:1
position: 2213938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2214417-2214786:1:exon

position:2214417:1
position: 2214417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117001276
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117001276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117001276
translation: MEGVSQILIQLARDGKLSVKAKDIQACLEWLLKDGAITYPRDIFGPEGWGACTQALAEHAMATKSAKHLKVWGTILQLLKRGMEEKETMWAARKALGLDCYGRLPFTEEQETQVEKGELEIEPKQEGSDSEILTAQEEKGEEKQVQEEIMARVCLTCGIMKPMSEGSCLGCIKKAYPVTGKRLNPPQYPWDDLREAERKARSTQPAPSPAPLPSAPPQFVDPEEWLPGLAMKAPEDPLEMAAEIASPEAGRGADGQRWREREVLRPEKGNQWRAPDKHPDIAEEVEELSEQLAAAWGTEEGGDAAAVGSRKPGREPGRLGGRLGGTSRAGKAQVNDHQVQMNLQQLQQLVNEITAEVEKQKRLLRTRSPVPPSQTEPSGIKFTDWRLIADECILGGLTLRPIATAYPVKAVAGGGVEWVALEPKAVQHLAATIEAKGLGHPLTLTLLDSIHAGGLLPWDLRNLGKTVLKPTAFLM
SIO_010081: LOC117001276
subclass of: SO_0000673
so part of: LOC117001276
location: 2211250..2212677
location: region:2211250-2212677:1
so has part: feature:2211250-2212677:1:exon

XP_032925357.1
type: Protein
SIO_000068: ncbiprotein

position:2212677:1
position: 2212677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2211250-2212677:1:exon

KCTD15
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: KCTD15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2336003..2595609
location: region:2336003-2595609:1
so has part: feature:2336003-2595609:1:exon
subclass of: SO_0000010

117001469
type: Gene
SIO_000068: ncbigene

position:2336003:1
position: 2336003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2595609:1
position: 2595609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2336003-2595609:1:exon

KCTD15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: KCTD15
product: potassium channel tetramerization domain containing 15, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069853.1
SIO_010081: KCTD15
subclass of: SO_0000673
so part of: KCTD15
location: join(2336003..2336094,2380058..2380282,2512742..2512779,2515037..2516475)
location: region:2336003-2516475:1
so has part: feature:2336003-2336094:1:exon
so has part: feature:2380058-2380282:1:exon
so has part: feature:2512742-2512779:1:exon
so has part: feature:2515037-2516475:1:exon

position:2516475:1
position: 2516475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2336003-2336094:1:exon

position:2336094:1
position: 2336094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2380058-2380282:1:exon

position:2380058:1
position: 2380058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2380282:1
position: 2380282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2512742-2512779:1:exon

position:2512742:1
position: 2512742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2512779:1
position: 2512779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2515037-2516475:1:exon

position:2515037:1
position: 2515037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCTD15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: KCTD15
product: potassium channel tetramerization domain containing 15, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069855.2
SIO_010081: KCTD15
subclass of: SO_0000673
so part of: KCTD15
location: join(2336006..2336094,2380058..2380282,2512742..2512779,2515037..2515211,2519424..2519509,2559075..2559250,2581714..2581858,2589324..2589629,2594833..2595609)
location: region:2336006-2595609:1
so has part: feature:2336006-2336094:1:exon
so has part: feature:2380058-2380282:1:exon
so has part: feature:2512742-2512779:1:exon
so has part: feature:2515037-2515211:1:exon
so has part: feature:2519424-2519509:1:exon
so has part: feature:2559075-2559250:1:exon
so has part: feature:2581714-2581858:1:exon
so has part: feature:2589324-2589629:1:exon
so has part: feature:2594833-2595609:1:exon

position:2336006:1
position: 2336006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2336006-2336094:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2380058-2380282:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2512742-2512779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2515037-2515211:1:exon

position:2515211:1
position: 2515211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2519424-2519509:1:exon

position:2519424:1
position: 2519424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2519509:1
position: 2519509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2559075-2559250:1:exon

position:2559075:1
position: 2559075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2559250:1
position: 2559250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2581714-2581858:1:exon

position:2581714:1
position: 2581714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2581858:1
position: 2581858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2589324-2589629:1:exon

position:2589324:1
position: 2589324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2589629:1
position: 2589629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2594833-2595609:1:exon

position:2594833:1
position: 2594833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCTD15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: KCTD15
product: potassium channel tetramerization domain containing 15, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069854.1
SIO_010081: KCTD15
subclass of: SO_0000673
so part of: KCTD15
location: join(2336278..2336327,2380058..2380282,2512742..2512779,2515037..2516475)
location: region:2336278-2516475:1
so has part: feature:2336278-2336327:1:exon
so has part: feature:2380058-2380282:1:exon
so has part: feature:2512742-2512779:1:exon
so has part: feature:2515037-2516475:1:exon

position:2336278:1
position: 2336278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2336278-2336327:1:exon

position:2336327:1
position: 2336327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2380058-2380282:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2512742-2512779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2515037-2516475:1:exon

KCTD15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: KCTD15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD15 isoform X3
translation: MRLTCMFSFILLFGAVGLVVFIHLQDPEEIVHQQTPGIKYNMGFQQPKKDCVSSNNQDRRLRKNTADRAATVKQSDSLEPPESVPTKLQSTDRRQSSVMFAMKDQQKEKYSFLMESRNQRLHQKKSCFQTAQRSVKEGRSMSRLSLTRSPVSPLAAQGIPLPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPDSRISRLFNGTEPIVLDSLKQHYFIDRDGEIFRYILSFLRTSKLLLPDDFKDFNLLYEEAKYYQLQPMIKELERWKQEKEQRKHFQPCDCLVVRVTPDLGERIALSGEKALIEEIFPETGDVMCNSVNAGWNQDPTHVIRFPLNGYCRLNSVQVLERLFQKGFNVAASCGGGVDSSQFSEYVLCREDRRAQPTPTIRIKQEPLD
SIO_010081: KCTD15
subclass of: SO_0000673
so part of: KCTD15
location: join(2380174..2380282,2512742..2512779,2515037..2515211,2519424..2519509,2559075..2559250,2581714..2581858,2589324..2589629,2594833..2594988)
location: region:2380174-2594988:1
so has part: feature:2380174-2380282:1:exon
so has part: feature:2512742-2512779:1:exon
so has part: feature:2515037-2515211:1:exon
so has part: feature:2519424-2519509:1:exon
so has part: feature:2559075-2559250:1:exon
so has part: feature:2581714-2581858:1:exon
so has part: feature:2589324-2589629:1:exon
so has part: feature:2594833-2594988:1:exon

XP_032925746.1
type: Protein
SIO_000068: ncbiprotein

position:2380174:1
position: 2380174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2594988:1
position: 2594988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2380174-2380282:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2512742-2512779:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2515037-2515211:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2519424-2519509:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2559075-2559250:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2581714-2581858:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2589324-2589629:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2594833-2594988:1:exon

KCTD15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: KCTD15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD15 isoform X2
translation: MRLTCMFSFILLFGAVGLVVFIHLQDPEEIVHQQTPGIKYNMGFQQPKKDCVSSNNQDRRLRKNTADRAATVKQSDSLEPPESVPTKLQSTDRRQSSVMFAMKDQQKGEEINSIKLYKRRRRFIIKKSPILISMNSSILNLPTLKYEDRNNSKWKSLYQIQGERKRIMRETCSKYKSNNRRIITPYHVSRIFVEDKYRVLYCEVPKAGCSNWKRVLMVLNGLASSTKDIQHNTVHYGNYLKRLDGFDHKGIYHRLNTYTKMLFIREPFEKLVSAFRDKFEHPNNYYHPVFGKAIISRYRVNATKEALRTGSGVKFKEFIQYLLDVHRPVGMDIHWDHVNRLCSPCLIDYDFVGKFESMEEDANFFLHLIGAPQNLTFPKFKDRHSNEERTTTKITQQYFAQLSPSQRQQSYDFYYMDYLMFNYSKPFEDLY
SIO_010081: KCTD15
subclass of: SO_0000673
so part of: KCTD15
location: join(2380174..2380282,2512742..2512779,2515037..2516185)
location: region:2380174-2516185:1
so has part: feature:2380174-2380282:1:exon
so has part: feature:2512742-2512779:1:exon
so has part: feature:2515037-2516185:1:exon

XP_032925744.1
type: Protein
SIO_000068: ncbiprotein

position:2516185:1
position: 2516185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2380174-2380282:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2512742-2512779:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2515037-2516185:1:exon

KCTD15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: KCTD15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD15 isoform X2
translation: MRLTCMFSFILLFGAVGLVVFIHLQDPEEIVHQQTPGIKYNMGFQQPKKDCVSSNNQDRRLRKNTADRAATVKQSDSLEPPESVPTKLQSTDRRQSSVMFAMKDQQKGEEINSIKLYKRRRRFIIKKSPILISMNSSILNLPTLKYEDRNNSKWKSLYQIQGERKRIMRETCSKYKSNNRRIITPYHVSRIFVEDKYRVLYCEVPKAGCSNWKRVLMVLNGLASSTKDIQHNTVHYGNYLKRLDGFDHKGIYHRLNTYTKMLFIREPFEKLVSAFRDKFEHPNNYYHPVFGKAIISRYRVNATKEALRTGSGVKFKEFIQYLLDVHRPVGMDIHWDHVNRLCSPCLIDYDFVGKFESMEEDANFFLHLIGAPQNLTFPKFKDRHSNEERTTTKITQQYFAQLSPSQRQQSYDFYYMDYLMFNYSKPFEDLY
SIO_010081: KCTD15
subclass of: SO_0000673
so part of: KCTD15
location: join(2380174..2380282,2512742..2512779,2515037..2516185)
location: region:2380174-2516185:1
so has part: feature:2380174-2380282:1:exon
so has part: feature:2512742-2512779:1:exon
so has part: feature:2515037-2516185:1:exon

XP_032925745.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2380174-2380282:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2512742-2512779:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2515037-2516185:1:exon

KCTD15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: KCTD15
product: potassium channel tetramerization domain containing 15, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042779624.1
SIO_010081: KCTD15
subclass of: SO_0000673
so part of: KCTD15
location: join(2380219..2380282,2515037..2516475)
location: region:2380219-2516475:1
so has part: feature:2380219-2380282:1:exon
so has part: feature:2515037-2516475:1:exon

position:2380219:1
position: 2380219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2380219-2380282:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2515037-2516475:1:exon

KCTD15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: KCTD15
product: potassium channel tetramerization domain containing 15, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069856.2
SIO_010081: KCTD15
subclass of: SO_0000673
so part of: KCTD15
location: join(2492792..2493064,2512742..2512779,2515037..2516475)
location: region:2492792-2516475:1
so has part: feature:2492792-2493064:1:exon
so has part: feature:2512742-2512779:1:exon
so has part: feature:2515037-2516475:1:exon

position:2492792:1
position: 2492792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2492792-2493064:1:exon

position:2493064:1
position: 2493064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2512742-2512779:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2515037-2516475:1:exon

KCTD15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: KCTD15
product: potassium channel tetramerization domain containing 15, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069852.2
SIO_010081: KCTD15
subclass of: SO_0000673
so part of: KCTD15
location: join(2510689..2512779,2515037..2516475)
location: region:2510689-2516475:1
so has part: feature:2510689-2512779:1:exon
so has part: feature:2515037-2516475:1:exon

position:2510689:1
position: 2510689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2510689-2512779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2515037-2516475:1:exon

KCTD15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: KCTD15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD15 isoform X1
translation: MKYTLIVIHHWYIHHCINNTCFSSLDENKLMWFLFLNNYFTFFLCLGIKYNMGFQQPKKDCVSSNNQDRRLRKNTADRAATVKQSDSLEPPESVPTKLQSTDRRQSSVMFAMKDQQKGEEINSIKLYKRRRRFIIKKSPILISMNSSILNLPTLKYEDRNNSKWKSLYQIQGERKRIMRETCSKYKSNNRRIITPYHVSRIFVEDKYRVLYCEVPKAGCSNWKRVLMVLNGLASSTKDIQHNTVHYGNYLKRLDGFDHKGIYHRLNTYTKMLFIREPFEKLVSAFRDKFEHPNNYYHPVFGKAIISRYRVNATKEALRTGSGVKFKEFIQYLLDVHRPVGMDIHWDHVNRLCSPCLIDYDFVGKFESMEEDANFFLHLIGAPQNLTFPKFKDRHSNEERTTTKITQQYFAQLSPSQRQQSYDFYYMDYLMFNYSKPFEDLY
SIO_010081: KCTD15
subclass of: SO_0000673
so part of: KCTD15
location: join(2512603..2512779,2515037..2516185)
location: region:2512603-2516185:1
so has part: feature:2512603-2512779:1:exon
so has part: feature:2515037-2516185:1:exon

XP_032925743.1
type: Protein
SIO_000068: ncbiprotein

position:2512603:1
position: 2512603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2512603-2512779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2515037-2516185:1:exon

KCTD15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: KCTD15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD15 isoform X4
translation: MGFQQPKKDCVSSNNQDRRLRKNTADRAATVKQSDSLEPPESVPTKLQSTDRRQSSVMFAMKDQQKGEEINSIKLYKRRRRFIIKKSPILISMNSSILNLPTLKYEDRNNSKWKSLYQIQGERKRIMRETCSKYKSNNRRIITPYHVSRIFVEDKYRVLYCEVPKAGCSNWKRVLMVLNGLASSTKDIQHNTVHYGNYLKRLDGFDHKGIYHRLNTYTKMLFIREPFEKLVSAFRDKFEHPNNYYHPVFGKAIISRYRVNATKEALRTGSGVKFKEFIQYLLDVHRPVGMDIHWDHVNRLCSPCLIDYDFVGKFESMEEDANFFLHLIGAPQNLTFPKFKDRHSNEERTTTKITQQYFAQLSPSQRQQSYDFYYMDYLMFNYSKPFEDLY
SIO_010081: KCTD15
subclass of: SO_0000673
so part of: KCTD15
location: join(2512756..2512779,2515037..2516185)
location: region:2512756-2516185:1
so has part: feature:2512756-2512779:1:exon
so has part: feature:2515037-2516185:1:exon

XP_032925747.1
type: Protein
SIO_000068: ncbiprotein

position:2512756:1
position: 2512756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2512756-2512779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2515037-2516185:1:exon

KCTD15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: KCTD15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD15 isoform X5
translation: MFAMKDQQKGEEINSIKLYKRRRRFIIKKSPILISMNSSILNLPTLKYEDRNNSKWKSLYQIQGERKRIMRETCSKYKSNNRRIITPYHVSRIFVEDKYRVLYCEVPKAGCSNWKRVLMVLNGLASSTKDIQHNTVHYGNYLKRLDGFDHKGIYHRLNTYTKMLFIREPFEKLVSAFRDKFEHPNNYYHPVFGKAIISRYRVNATKEALRTGSGVKFKEFIQYLLDVHRPVGMDIHWDHVNRLCSPCLIDYDFVGKFESMEEDANFFLHLIGAPQNLTFPKFKDRHSNEERTTTKITQQYFAQLSPSQRQQSYDFYYMDYLMFNYSKPFEDLY
SIO_010081: KCTD15
subclass of: SO_0000673
so part of: KCTD15
location: 2515184..2516185
location: region:2515184-2516185:1
so has part: feature:2515184-2516185:1:exon

XP_042635558.1
type: Protein
SIO_000068: ncbiprotein

position:2515184:1
position: 2515184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2515184-2516185:1:exon

KCTD15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: KCTD15
product: potassium channel tetramerization domain containing 15, transcript variant X9
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069859.2
SIO_010081: KCTD15
subclass of: SO_0000673
so part of: KCTD15
location: join(2553018..2553512,2559075..2559250,2581714..2581858,2589324..2589629,2594833..2595609)
location: region:2553018-2595609:1
so has part: feature:2553018-2553512:1:exon
so has part: feature:2559075-2559250:1:exon
so has part: feature:2581714-2581858:1:exon
so has part: feature:2589324-2589629:1:exon
so has part: feature:2594833-2595609:1:exon

position:2553018:1
position: 2553018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2553018-2553512:1:exon

position:2553512:1
position: 2553512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2559075-2559250:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2581714-2581858:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2589324-2589629:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2594833-2595609:1:exon

KCTD15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: KCTD15
product: potassium channel tetramerization domain containing 15, transcript variant X8
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069858.2
SIO_010081: KCTD15
subclass of: SO_0000673
so part of: KCTD15
location: join(2553681..2553989,2559075..2559250,2581714..2581858,2589324..2589629,2594833..2595609)
location: region:2553681-2595609:1
so has part: feature:2553681-2553989:1:exon
so has part: feature:2559075-2559250:1:exon
so has part: feature:2581714-2581858:1:exon
so has part: feature:2589324-2589629:1:exon
so has part: feature:2594833-2595609:1:exon

position:2553681:1
position: 2553681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2553681-2553989:1:exon

position:2553989:1
position: 2553989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2559075-2559250:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2581714-2581858:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2589324-2589629:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2594833-2595609:1:exon

KCTD15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: KCTD15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD15 isoform X7
translation: MEGRSMSRLSLTRSPVSPLAAQGIPLPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPDSRISRLFNGTEPIVLDSLKQHYFIDRDGEIFRYILSFLRTSKLLLPDDFKDFNLLYEEAKYYQLQPMIKELERWKQEKEQRKHFQPCDCLVVRVTPDLGERIALSGEKALIEEIFPETGDVMCNSVNAGWNQDPTHVIRFPLNGYCRLNSVQVLERLFQKGFNVAASCGGGVDSSQFSEYVLCREDRRAQPTPTIRIKQEPLD
SIO_010081: KCTD15
subclass of: SO_0000673
so part of: KCTD15
location: join(2553987..2553989,2559075..2559250,2581714..2581858,2589324..2589629,2594833..2594988)
location: region:2553987-2594988:1
so has part: feature:2553987-2553989:1:exon
so has part: feature:2559075-2559250:1:exon
so has part: feature:2581714-2581858:1:exon
so has part: feature:2589324-2589629:1:exon
so has part: feature:2594833-2594988:1:exon

XP_032925749.1
type: Protein
SIO_000068: ncbiprotein

position:2553987:1
position: 2553987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2553987-2553989:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2559075-2559250:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2581714-2581858:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2589324-2589629:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2594833-2594988:1:exon

KCTD15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: KCTD15
product: potassium channel tetramerization domain containing 15, transcript variant X10
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069861.2
SIO_010081: KCTD15
subclass of: SO_0000673
so part of: KCTD15
location: join(2554730..2554933,2559075..2559250,2581714..2581858,2589324..2589629,2594833..2595609)
location: region:2554730-2595609:1
so has part: feature:2554730-2554933:1:exon
so has part: feature:2559075-2559250:1:exon
so has part: feature:2581714-2581858:1:exon
so has part: feature:2589324-2589629:1:exon
so has part: feature:2594833-2595609:1:exon

position:2554730:1
position: 2554730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2554730-2554933:1:exon

position:2554933:1
position: 2554933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2559075-2559250:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2581714-2581858:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2589324-2589629:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2594833-2595609:1:exon

KCTD15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: KCTD15
product: potassium channel tetramerization domain containing 15, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069857.2
SIO_010081: KCTD15
subclass of: SO_0000673
so part of: KCTD15
location: join(2555166..2557646,2559075..2559250,2581714..2581858,2589324..2589629,2594833..2595609)
location: region:2555166-2595609:1
so has part: feature:2555166-2557646:1:exon
so has part: feature:2559075-2559250:1:exon
so has part: feature:2581714-2581858:1:exon
so has part: feature:2589324-2589629:1:exon
so has part: feature:2594833-2595609:1:exon

position:2555166:1
position: 2555166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2555166-2557646:1:exon

position:2557646:1
position: 2557646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2559075-2559250:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2581714-2581858:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2589324-2589629:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2594833-2595609:1:exon

KCTD15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: KCTD15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD15 isoform X6
translation: MWIHNGEGRSMSRLSLTRSPVSPLAAQGIPLPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPDSRISRLFNGTEPIVLDSLKQHYFIDRDGEIFRYILSFLRTSKLLLPDDFKDFNLLYEEAKYYQLQPMIKELERWKQEKEQRKHFQPCDCLVVRVTPDLGERIALSGEKALIEEIFPETGDVMCNSVNAGWNQDPTHVIRFPLNGYCRLNSVQVLERLFQKGFNVAASCGGGVDSSQFSEYVLCREDRRAQPTPTIRIKQEPLD
SIO_010081: KCTD15
subclass of: SO_0000673
so part of: KCTD15
location: join(2557629..2557646,2559075..2559250,2581714..2581858,2589324..2589629,2594833..2594988)
location: region:2557629-2594988:1
so has part: feature:2557629-2557646:1:exon
so has part: feature:2559075-2559250:1:exon
so has part: feature:2581714-2581858:1:exon
so has part: feature:2589324-2589629:1:exon
so has part: feature:2594833-2594988:1:exon

XP_032925748.1
type: Protein
SIO_000068: ncbiprotein

position:2557629:1
position: 2557629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2557629-2557646:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2559075-2559250:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2581714-2581858:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2589324-2589629:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2594833-2594988:1:exon

KCTD15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: KCTD15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD15 isoform X8
translation: MSRLSLTRSPVSPLAAQGIPLPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPDSRISRLFNGTEPIVLDSLKQHYFIDRDGEIFRYILSFLRTSKLLLPDDFKDFNLLYEEAKYYQLQPMIKELERWKQEKEQRKHFQPCDCLVVRVTPDLGERIALSGEKALIEEIFPETGDVMCNSVNAGWNQDPTHVIRFPLNGYCRLNSVQVLERLFQKGFNVAASCGGGVDSSQFSEYVLCREDRRAQPTPTIRIKQEPLD
SIO_010081: KCTD15
subclass of: SO_0000673
so part of: KCTD15
location: join(2559087..2559250,2581714..2581858,2589324..2589629,2594833..2594988)
location: region:2559087-2594988:1
so has part: feature:2559087-2559250:1:exon
so has part: feature:2581714-2581858:1:exon
so has part: feature:2589324-2589629:1:exon
so has part: feature:2594833-2594988:1:exon

XP_032925750.1
type: Protein
SIO_000068: ncbiprotein

position:2559087:1
position: 2559087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2559087-2559250:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2581714-2581858:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2589324-2589629:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2594833-2594988:1:exon

KCTD15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: KCTD15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD15 isoform X8
translation: MSRLSLTRSPVSPLAAQGIPLPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPDSRISRLFNGTEPIVLDSLKQHYFIDRDGEIFRYILSFLRTSKLLLPDDFKDFNLLYEEAKYYQLQPMIKELERWKQEKEQRKHFQPCDCLVVRVTPDLGERIALSGEKALIEEIFPETGDVMCNSVNAGWNQDPTHVIRFPLNGYCRLNSVQVLERLFQKGFNVAASCGGGVDSSQFSEYVLCREDRRAQPTPTIRIKQEPLD
SIO_010081: KCTD15
subclass of: SO_0000673
so part of: KCTD15
location: join(2559087..2559250,2581714..2581858,2589324..2589629,2594833..2594988)
location: region:2559087-2594988:1
so has part: feature:2559087-2559250:1:exon
so has part: feature:2581714-2581858:1:exon
so has part: feature:2589324-2589629:1:exon
so has part: feature:2594833-2594988:1:exon

XP_032925752.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2559087-2559250:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2581714-2581858:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2589324-2589629:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2594833-2594988:1:exon

LOC117001466
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117001466
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2599701..2746282)
location: region:2599701-2746282:-1
so has part: feature:2599701-2746282:-1:exon
subclass of: SO_0000010

117001466
type: Gene
SIO_000068: ncbigene

position:2599701:-1
position: 2599701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2746282:-1
position: 2746282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2599701-2746282:-1:exon

LOC117001466
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117001466
product: transcription initiation factor TFIID subunit 4-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_042779638.1
SIO_010081: LOC117001466
subclass of: SO_0000673
so part of: LOC117001466
location: complement(join(2599701..2600043,2642581..2642703,2668029..2668085,2677973..2678098,2679899..2680029,2698118..2698287,2706820..2706934,2710924..2711029,2720028..2720285,2722058..2722147,2723407..2723529,2724327..2724554,2725295..2725426,2741453..2741625,2745262..2745379,2745914..2746282))
location: region:2599701-2746282:-1
so has part: feature:2745914-2746282:-1:exon
so has part: feature:2745262-2745379:-1:exon
so has part: feature:2741453-2741625:-1:exon
so has part: feature:2725295-2725426:-1:exon
so has part: feature:2724327-2724554:-1:exon
so has part: feature:2723407-2723529:-1:exon
so has part: feature:2722058-2722147:-1:exon
so has part: feature:2720028-2720285:-1:exon
so has part: feature:2710924-2711029:-1:exon
so has part: feature:2706820-2706934:-1:exon
so has part: feature:2698118-2698287:-1:exon
so has part: feature:2679899-2680029:-1:exon
so has part: feature:2677973-2678098:-1:exon
so has part: feature:2668029-2668085:-1:exon
so has part: feature:2642581-2642703:-1:exon
so has part: feature:2599701-2600043:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2745914-2746282:-1:exon

position:2745914:-1
position: 2745914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2745262-2745379:-1:exon

position:2745262:-1
position: 2745262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2745379:-1
position: 2745379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2741453-2741625:-1:exon

position:2741453:-1
position: 2741453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2741625:-1
position: 2741625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2725295-2725426:-1:exon

position:2725295:-1
position: 2725295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2725426:-1
position: 2725426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2724327-2724554:-1:exon

position:2724327:-1
position: 2724327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2724554:-1
position: 2724554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2723407-2723529:-1:exon

position:2723407:-1
position: 2723407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2723529:-1
position: 2723529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2722058-2722147:-1:exon

position:2722058:-1
position: 2722058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2722147:-1
position: 2722147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2720028-2720285:-1:exon

position:2720028:-1
position: 2720028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2720285:-1
position: 2720285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2710924-2711029:-1:exon

position:2710924:-1
position: 2710924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2711029:-1
position: 2711029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2706820-2706934:-1:exon

position:2706820:-1
position: 2706820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2706934:-1
position: 2706934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2698118-2698287:-1:exon

position:2698118:-1
position: 2698118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2698287:-1
position: 2698287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2679899-2680029:-1:exon

position:2679899:-1
position: 2679899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2680029:-1
position: 2680029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2677973-2678098:-1:exon

position:2677973:-1
position: 2677973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2678098:-1
position: 2678098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2668029-2668085:-1:exon

position:2668029:-1
position: 2668029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2668085:-1
position: 2668085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2642581-2642703:-1:exon

position:2642581:-1
position: 2642581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2642703:-1
position: 2642703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2599701-2600043:-1:exon

position:2600043:-1
position: 2600043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117001466
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117001466
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription initiation factor TFIID subunit 4-like
translation: MAAGASDPLDEMLLFSEEVDEKALSDLVGSLESQLAGSRGPAEPPPPRTSAPSQQPQPQQGSLAGGSSPGRQQHGRPAPPPAPGAGEAAARPGSAGSRAPAQGPLPSPSPPAAAAAAAGRGASAVSPRPALGAAPRIVAPQLIVRPPPQATIQLPPGFTIPPGMVLVRTDAGQLVMVPQQALAQAQMQAQVQTQGQGPASMSPRLSVPTTGPVFRLSTAQQPTSVGTSSVRLGLPVQAKVVPSPAAPASAAATLPGGAVLSHTTVSVATTSAQNLFKTTVATGTSASQQAAVISGGQSQGSAQPQGQPRLPLPPHTAAQVPAQPLVIPSSPVPGTTVVSQEMQENVKKCKNFLATLIKLASHNSPSPETSRNVKALVQDLLDAKIDPEEFTGRLQTELKSSPQPYLVPFLKKSLPALRQSLLNSQHLVLQGQPSQQSLQQSKLSQVIPQSASGSISSVVTTQTIGIRQPNNICTVSVSNTVQPPQVKVVQSNQSSQLQIIQSTSAQTVKRTPACQTTQIRMPVVITQTIRPQGTVGKAPTIQASKSPGGFGVQVSANQKNKLNDPGGGSFRDDDDINDVASMAGVNLNEESARIMATNSDLVGTQTQSCKDEPFLAAIPLHKRILETAKKLGITDVPAEVVTFISHATQNRLRAVLEKVTVITQHRMESYKDDEWYEQATDVRSQLKFFEQLERLEKQRKDEHEREILLKAAKSRSRQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRRLDAPGLLSIGGEGLGLCGGSQGLGTASPRQYPRQKITRVNLRDFIFYMEQEREMSHSLLLYRALLK
SIO_010081: LOC117001466
subclass of: SO_0000673
so part of: LOC117001466
location: complement(join(2599879..2600043,2642581..2642703,2668029..2668085,2677973..2678098,2679899..2680029,2698118..2698287,2706820..2706934,2710924..2711029,2720028..2720285,2722058..2722147,2723407..2723529,2724327..2724554,2725295..2725426,2741453..2741625,2745262..2745379,2745914..2746282))
location: region:2599879-2746282:-1
so has part: feature:2745914-2746282:-1:exon
so has part: feature:2745262-2745379:-1:exon
so has part: feature:2741453-2741625:-1:exon
so has part: feature:2725295-2725426:-1:exon
so has part: feature:2724327-2724554:-1:exon
so has part: feature:2723407-2723529:-1:exon
so has part: feature:2722058-2722147:-1:exon
so has part: feature:2720028-2720285:-1:exon
so has part: feature:2710924-2711029:-1:exon
so has part: feature:2706820-2706934:-1:exon
so has part: feature:2698118-2698287:-1:exon
so has part: feature:2679899-2680029:-1:exon
so has part: feature:2677973-2678098:-1:exon
so has part: feature:2668029-2668085:-1:exon
so has part: feature:2642581-2642703:-1:exon
so has part: feature:2599879-2600043:-1:exon

XP_042635572.1
type: Protein
SIO_000068: ncbiprotein

position:2599879:-1
position: 2599879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2745914-2746282:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2745262-2745379:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2741453-2741625:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2725295-2725426:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2724327-2724554:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2723407-2723529:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2722058-2722147:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2720028-2720285:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2710924-2711029:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2706820-2706934:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2698118-2698287:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2679899-2680029:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2677973-2678098:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2668029-2668085:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2642581-2642703:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2599879-2600043:-1:exon

LSM14A
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LSM14A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2751156..2770048
location: region:2751156-2770048:1
so has part: feature:2751156-2770048:1:exon
subclass of: SO_0000010

117001468
type: Gene
SIO_000068: ncbigene

position:2751156:1
position: 2751156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2770048:1
position: 2770048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2751156-2770048:1:exon

LSM14A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LSM14A
product: LSM14A mRNA processing body assembly factor, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069847.2
SIO_010081: LSM14A
subclass of: SO_0000673
so part of: LSM14A
location: join(2751156..2751524,2758944..2759107,2760253..2760385,2761355..2761477,2763181..2763357,2763667..2763729,2764316..2764495,2765951..2766122,2766938..2767166,2768244..2770048)
location: region:2751156-2770048:1
so has part: feature:2751156-2751524:1:exon
so has part: feature:2758944-2759107:1:exon
so has part: feature:2760253-2760385:1:exon
so has part: feature:2761355-2761477:1:exon
so has part: feature:2763181-2763357:1:exon
so has part: feature:2763667-2763729:1:exon
so has part: feature:2764316-2764495:1:exon
so has part: feature:2765951-2766122:1:exon
so has part: feature:2766938-2767166:1:exon
so has part: feature:2768244-2770048:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2751156-2751524:1:exon

position:2751524:1
position: 2751524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2758944-2759107:1:exon

position:2758944:1
position: 2758944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2759107:1
position: 2759107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2760253-2760385:1:exon

position:2760253:1
position: 2760253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2760385:1
position: 2760385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2761355-2761477:1:exon

position:2761355:1
position: 2761355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2761477:1
position: 2761477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2763181-2763357:1:exon

position:2763181:1
position: 2763181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2763357:1
position: 2763357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2763667-2763729:1:exon

position:2763667:1
position: 2763667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2763729:1
position: 2763729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2764316-2764495:1:exon

position:2764316:1
position: 2764316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2764495:1
position: 2764495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2765951-2766122:1:exon

position:2765951:1
position: 2765951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2766122:1
position: 2766122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2766938-2767166:1:exon

position:2766938:1
position: 2766938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2767166:1
position: 2767166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2768244-2770048:1:exon

position:2768244:1
position: 2768244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LSM14A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LSM14A
product: LSM14A mRNA processing body assembly factor, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069850.2
SIO_010081: LSM14A
subclass of: SO_0000673
so part of: LSM14A
location: join(2751156..2751524,2758944..2759107,2760253..2760385,2761355..2761477,2763181..2763357,2764316..2764495,2765951..2766122,2766938..2767166,2768244..2770048)
location: region:2751156-2770048:1
so has part: feature:2751156-2751524:1:exon
so has part: feature:2758944-2759107:1:exon
so has part: feature:2760253-2760385:1:exon
so has part: feature:2761355-2761477:1:exon
so has part: feature:2763181-2763357:1:exon
so has part: feature:2764316-2764495:1:exon
so has part: feature:2765951-2766122:1:exon
so has part: feature:2766938-2767166:1:exon
so has part: feature:2768244-2770048:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2751156-2751524:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2758944-2759107:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2760253-2760385:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2761355-2761477:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2763181-2763357:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2764316-2764495:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2765951-2766122:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2766938-2767166:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2768244-2770048:1:exon

LSM14A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LSM14A
product: LSM14A mRNA processing body assembly factor, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069848.2
SIO_010081: LSM14A
subclass of: SO_0000673
so part of: LSM14A
location: join(2751156..2751524,2758944..2759107,2760253..2760385,2761358..2761477,2763181..2763357,2763667..2763729,2764316..2764495,2765951..2766122,2766938..2767166,2768244..2770048)
location: region:2751156-2770048:1
so has part: feature:2751156-2751524:1:exon
so has part: feature:2758944-2759107:1:exon
so has part: feature:2760253-2760385:1:exon
so has part: feature:2761358-2761477:1:exon
so has part: feature:2763181-2763357:1:exon
so has part: feature:2763667-2763729:1:exon
so has part: feature:2764316-2764495:1:exon
so has part: feature:2765951-2766122:1:exon
so has part: feature:2766938-2767166:1:exon
so has part: feature:2768244-2770048:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2751156-2751524:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2758944-2759107:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2760253-2760385:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2761358-2761477:1:exon

position:2761358:1
position: 2761358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2763181-2763357:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2763667-2763729:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2764316-2764495:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2765951-2766122:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2766938-2767166:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2768244-2770048:1:exon

LSM14A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LSM14A
product: LSM14A mRNA processing body assembly factor, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069851.2
SIO_010081: LSM14A
subclass of: SO_0000673
so part of: LSM14A
location: join(2751156..2751524,2758944..2759107,2760253..2760385,2761358..2761477,2763181..2763357,2764316..2764495,2765951..2766122,2766938..2767166,2768244..2770048)
location: region:2751156-2770048:1
so has part: feature:2751156-2751524:1:exon
so has part: feature:2758944-2759107:1:exon
so has part: feature:2760253-2760385:1:exon
so has part: feature:2761358-2761477:1:exon
so has part: feature:2763181-2763357:1:exon
so has part: feature:2764316-2764495:1:exon
so has part: feature:2765951-2766122:1:exon
so has part: feature:2766938-2767166:1:exon
so has part: feature:2768244-2770048:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2751156-2751524:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2758944-2759107:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2760253-2760385:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2761358-2761477:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2763181-2763357:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2764316-2764495:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2765951-2766122:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2766938-2767166:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2768244-2770048:1:exon

LSM14A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LSM14A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein LSM14 homolog A isoform X1
translation: MSGGTPYIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRPIPPRDEVFEYIIFRGSDIKDLTVCEPPKPQCSLPQDPAIVQSSLGSSTTSSFQSVGSYGPFGRMPAYSQFSPSPLVGQQFGAVGVAGGSLTSFGTDSSGSASMSQSTAVGSAFTTDARSLKTQMSQGRSSPQMDHLRRSPTMEQAVQTASAHLPTPAPVGRRSPVQTRPLVSASQKSLENQEHRRAEAHKVSRSENELRNENKRQIVPGAPAARRGRGGHRGGRGRFGIRRDGPMKFEKDFDFESANAQFNKEEIDREFHNKLKLKEDKLEKPEKPVNGEDKGDSGVDTQNSEGNADEEDPLGPNCYYDKTKSFFDNISCDDNRERRPTWAEERRLNAETFGIPLRPNRGRGGYRGRGVIGFRGGRGRAGGRGGFPAPRGFRGAFRGGRGGREFADFEYRKDNKVAA
SIO_010081: LSM14A
subclass of: SO_0000673
so part of: LSM14A
location: join(2751404..2751524,2758944..2759107,2760253..2760385,2761355..2761477,2763181..2763357,2763667..2763729,2764316..2764495,2765951..2766122,2766938..2767166,2768244..2768267)
location: region:2751404-2768267:1
so has part: feature:2751404-2751524:1:exon
so has part: feature:2758944-2759107:1:exon
so has part: feature:2760253-2760385:1:exon
so has part: feature:2761355-2761477:1:exon
so has part: feature:2763181-2763357:1:exon
so has part: feature:2763667-2763729:1:exon
so has part: feature:2764316-2764495:1:exon
so has part: feature:2765951-2766122:1:exon
so has part: feature:2766938-2767166:1:exon
so has part: feature:2768244-2768267:1:exon

XP_032925738.1
type: Protein
SIO_000068: ncbiprotein

position:2751404:1
position: 2751404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2768267:1
position: 2768267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2751404-2751524:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2758944-2759107:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2760253-2760385:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2761355-2761477:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2763181-2763357:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2763667-2763729:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2764316-2764495:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2765951-2766122:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2766938-2767166:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2768244-2768267:1:exon

LSM14A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LSM14A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein LSM14 homolog A isoform X3
translation: MSGGTPYIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRPIPPRDEVFEYIIFRGSDIKDLTVCEPPKPQCSLPQDPAIVQSSLGSSTTSSFQSVGSYGPFGRMPAYSQFSPSPLVGQQFGAVGVAGGSLTSFGTDSSGSASMSQSTAVGSAFTTDARSLKTQMSQGRSSPQMDHLRRSPTMEQAVQTASAHLPTPAPVGRRSPVQTRPLVSASQKSLENQEHRRVPGAPAARRGRGGHRGGRGRFGIRRDGPMKFEKDFDFESANAQFNKEEIDREFHNKLKLKEDKLEKPEKPVNGEDKGDSGVDTQNSEGNADEEDPLGPNCYYDKTKSFFDNISCDDNRERRPTWAEERRLNAETFGIPLRPNRGRGGYRGRGVIGFRGGRGRAGGRGGFPAPRGFRGAFRGGRGGREFADFEYRKDNKVAA
SIO_010081: LSM14A
subclass of: SO_0000673
so part of: LSM14A
location: join(2751404..2751524,2758944..2759107,2760253..2760385,2761355..2761477,2763181..2763357,2764316..2764495,2765951..2766122,2766938..2767166,2768244..2768267)
location: region:2751404-2768267:1
so has part: feature:2751404-2751524:1:exon
so has part: feature:2758944-2759107:1:exon
so has part: feature:2760253-2760385:1:exon
so has part: feature:2761355-2761477:1:exon
so has part: feature:2763181-2763357:1:exon
so has part: feature:2764316-2764495:1:exon
so has part: feature:2765951-2766122:1:exon
so has part: feature:2766938-2767166:1:exon
so has part: feature:2768244-2768267:1:exon

XP_032925741.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2751404-2751524:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2758944-2759107:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2760253-2760385:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2761355-2761477:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2763181-2763357:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2764316-2764495:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2765951-2766122:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2766938-2767166:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2768244-2768267:1:exon

LSM14A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LSM14A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein LSM14 homolog A isoform X2
translation: MSGGTPYIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRPIPPRDEVFEYIIFRGSDIKDLTVCEPPKPQCSLPQDPAIVQSSLGSSTTSSFQSVGSYGPFGRMPAYSQFSPSPLVGQQFGAVGVGGSLTSFGTDSSGSASMSQSTAVGSAFTTDARSLKTQMSQGRSSPQMDHLRRSPTMEQAVQTASAHLPTPAPVGRRSPVQTRPLVSASQKSLENQEHRRAEAHKVSRSENELRNENKRQIVPGAPAARRGRGGHRGGRGRFGIRRDGPMKFEKDFDFESANAQFNKEEIDREFHNKLKLKEDKLEKPEKPVNGEDKGDSGVDTQNSEGNADEEDPLGPNCYYDKTKSFFDNISCDDNRERRPTWAEERRLNAETFGIPLRPNRGRGGYRGRGVIGFRGGRGRAGGRGGFPAPRGFRGAFRGGRGGREFADFEYRKDNKVAA
SIO_010081: LSM14A
subclass of: SO_0000673
so part of: LSM14A
location: join(2751404..2751524,2758944..2759107,2760253..2760385,2761358..2761477,2763181..2763357,2763667..2763729,2764316..2764495,2765951..2766122,2766938..2767166,2768244..2768267)
location: region:2751404-2768267:1
so has part: feature:2751404-2751524:1:exon
so has part: feature:2758944-2759107:1:exon
so has part: feature:2760253-2760385:1:exon
so has part: feature:2761358-2761477:1:exon
so has part: feature:2763181-2763357:1:exon
so has part: feature:2763667-2763729:1:exon
so has part: feature:2764316-2764495:1:exon
so has part: feature:2765951-2766122:1:exon
so has part: feature:2766938-2767166:1:exon
so has part: feature:2768244-2768267:1:exon

XP_032925739.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2751404-2751524:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2758944-2759107:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2760253-2760385:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2761358-2761477:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2763181-2763357:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2763667-2763729:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2764316-2764495:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2765951-2766122:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2766938-2767166:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2768244-2768267:1:exon

LSM14A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LSM14A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein LSM14 homolog A isoform X4
translation: MSGGTPYIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRPIPPRDEVFEYIIFRGSDIKDLTVCEPPKPQCSLPQDPAIVQSSLGSSTTSSFQSVGSYGPFGRMPAYSQFSPSPLVGQQFGAVGVGGSLTSFGTDSSGSASMSQSTAVGSAFTTDARSLKTQMSQGRSSPQMDHLRRSPTMEQAVQTASAHLPTPAPVGRRSPVQTRPLVSASQKSLENQEHRRVPGAPAARRGRGGHRGGRGRFGIRRDGPMKFEKDFDFESANAQFNKEEIDREFHNKLKLKEDKLEKPEKPVNGEDKGDSGVDTQNSEGNADEEDPLGPNCYYDKTKSFFDNISCDDNRERRPTWAEERRLNAETFGIPLRPNRGRGGYRGRGVIGFRGGRGRAGGRGGFPAPRGFRGAFRGGRGGREFADFEYRKDNKVAA
SIO_010081: LSM14A
subclass of: SO_0000673
so part of: LSM14A
location: join(2751404..2751524,2758944..2759107,2760253..2760385,2761358..2761477,2763181..2763357,2764316..2764495,2765951..2766122,2766938..2767166,2768244..2768267)
location: region:2751404-2768267:1
so has part: feature:2751404-2751524:1:exon
so has part: feature:2758944-2759107:1:exon
so has part: feature:2760253-2760385:1:exon
so has part: feature:2761358-2761477:1:exon
so has part: feature:2763181-2763357:1:exon
so has part: feature:2764316-2764495:1:exon
so has part: feature:2765951-2766122:1:exon
so has part: feature:2766938-2767166:1:exon
so has part: feature:2768244-2768267:1:exon

XP_032925742.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2751404-2751524:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2758944-2759107:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2760253-2760385:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2761358-2761477:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2763181-2763357:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2764316-2764495:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2765951-2766122:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2766938-2767166:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2768244-2768267:1:exon

SS18L2
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: SS18L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2770118..2771587
location: region:2770118-2771587:1
so has part: feature:2770118-2771587:1:exon
subclass of: SO_0000010

117001470
type: Gene
SIO_000068: ncbigene

position:2770118:1
position: 2770118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2771587:1
position: 2771587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2770118-2771587:1:exon

SS18L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: SS18L2
product: SS18 like 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069862.1
SIO_010081: SS18L2
subclass of: SO_0000673
so part of: SS18L2
location: join(2770118..2770225,2770371..2770447,2771024..2771587)
location: region:2770118-2771587:1
so has part: feature:2770118-2770225:1:exon
so has part: feature:2770371-2770447:1:exon
so has part: feature:2771024-2771587:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2770118-2770225:1:exon

position:2770225:1
position: 2770225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2770371-2770447:1:exon

position:2770371:1
position: 2770371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2770447:1
position: 2770447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2771024-2771587:1:exon

position:2771024:1
position: 2771024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SS18L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: SS18L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SS18-like protein 2
translation: MSVAFVPERQRGRAEVNQDTLQRLLEENDQLIRCIVEYQSKGRATDCVQYQHILHRNLIYLATIADATPPSTQKPAD
SIO_010081: SS18L2
subclass of: SO_0000673
so part of: SS18L2
location: join(2770157..2770225,2770371..2770447,2771024..2771111)
location: region:2770157-2771111:1
so has part: feature:2770157-2770225:1:exon
so has part: feature:2770371-2770447:1:exon
so has part: feature:2771024-2771111:1:exon

XP_032925753.1
type: Protein
SIO_000068: ncbiprotein

position:2770157:1
position: 2770157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2771111:1
position: 2771111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2770157-2770225:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2770371-2770447:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2771024-2771111:1:exon

GARRE1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: GARRE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2772322..2831808)
location: region:2772322-2831808:-1
so has part: feature:2772322-2831808:-1:exon
subclass of: SO_0000010

117001465
type: Gene
SIO_000068: ncbigene

position:2772322:-1
position: 2772322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2831808:-1
position: 2831808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2772322-2831808:-1:exon

GARRE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: GARRE1
product: granule associated Rac and RHOG effector 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069842.1
SIO_010081: GARRE1
subclass of: SO_0000673
so part of: GARRE1
location: complement(join(2772322..2775050,2775499..2775577,2777640..2777774,2778632..2778797,2782880..2783865,2784335..2784460,2785659..2785756,2790071..2790229,2791175..2791336,2791473..2791568,2791841..2791981,2794254..2794460,2801899..2803228,2831738..2831808))
location: region:2772322-2831808:-1
so has part: feature:2831738-2831808:-1:exon
so has part: feature:2801899-2803228:-1:exon
so has part: feature:2794254-2794460:-1:exon
so has part: feature:2791841-2791981:-1:exon
so has part: feature:2791473-2791568:-1:exon
so has part: feature:2791175-2791336:-1:exon
so has part: feature:2790071-2790229:-1:exon
so has part: feature:2785659-2785756:-1:exon
so has part: feature:2784335-2784460:-1:exon
so has part: feature:2782880-2783865:-1:exon
so has part: feature:2778632-2778797:-1:exon
so has part: feature:2777640-2777774:-1:exon
so has part: feature:2775499-2775577:-1:exon
so has part: feature:2772322-2775050:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2831738-2831808:-1:exon

position:2831738:-1
position: 2831738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2801899-2803228:-1:exon

position:2801899:-1
position: 2801899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2803228:-1
position: 2803228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2794254-2794460:-1:exon

position:2794254:-1
position: 2794254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2794460:-1
position: 2794460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2791841-2791981:-1:exon

position:2791841:-1
position: 2791841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2791981:-1
position: 2791981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2791473-2791568:-1:exon

position:2791473:-1
position: 2791473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2791568:-1
position: 2791568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2791175-2791336:-1:exon

position:2791175:-1
position: 2791175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2791336:-1
position: 2791336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2790071-2790229:-1:exon

position:2790071:-1
position: 2790071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2790229:-1
position: 2790229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2785659-2785756:-1:exon

position:2785659:-1
position: 2785659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2785756:-1
position: 2785756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2784335-2784460:-1:exon

position:2784335:-1
position: 2784335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2784460:-1
position: 2784460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2782880-2783865:-1:exon

position:2782880:-1
position: 2782880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2783865:-1
position: 2783865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2778632-2778797:-1:exon

position:2778632:-1
position: 2778632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2778797:-1
position: 2778797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2777640-2777774:-1:exon

position:2777640:-1
position: 2777640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2777774:-1
position: 2777774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2775499-2775577:-1:exon

position:2775499:-1
position: 2775499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2775577:-1
position: 2775577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2772322-2775050:-1:exon

position:2775050:-1
position: 2775050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GARRE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: GARRE1
product: granule associated Rac and RHOG effector 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069844.1
SIO_010081: GARRE1
subclass of: SO_0000673
so part of: GARRE1
location: complement(join(2772322..2775050,2775499..2775577,2777640..2777774,2778632..2778797,2782880..2783865,2784335..2784460,2785659..2785756,2790071..2790229,2791175..2791336,2791473..2791568,2791841..2791981,2794254..2794460,2801899..2803228,2830921..2830968))
location: region:2772322-2830968:-1
so has part: feature:2830921-2830968:-1:exon
so has part: feature:2801899-2803228:-1:exon
so has part: feature:2794254-2794460:-1:exon
so has part: feature:2791841-2791981:-1:exon
so has part: feature:2791473-2791568:-1:exon
so has part: feature:2791175-2791336:-1:exon
so has part: feature:2790071-2790229:-1:exon
so has part: feature:2785659-2785756:-1:exon
so has part: feature:2784335-2784460:-1:exon
so has part: feature:2782880-2783865:-1:exon
so has part: feature:2778632-2778797:-1:exon
so has part: feature:2777640-2777774:-1:exon
so has part: feature:2775499-2775577:-1:exon
so has part: feature:2772322-2775050:-1:exon

position:2830968:-1
position: 2830968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2830921-2830968:-1:exon

position:2830921:-1
position: 2830921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2801899-2803228:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2794254-2794460:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2791841-2791981:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2791473-2791568:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2791175-2791336:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2790071-2790229:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2785659-2785756:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2784335-2784460:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2782880-2783865:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2778632-2778797:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2777640-2777774:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2775499-2775577:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2772322-2775050:-1:exon

GARRE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: GARRE1
product: granule associated Rac and RHOG effector 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069843.1
SIO_010081: GARRE1
subclass of: SO_0000673
so part of: GARRE1
location: complement(join(2772322..2775050,2775499..2775577,2777640..2777774,2778632..2778797,2782880..2783865,2784335..2784460,2785659..2785756,2790071..2790229,2791175..2791336,2791473..2791568,2791841..2791981,2794254..2794460,2801899..2803228,2805908..2806038))
location: region:2772322-2806038:-1
so has part: feature:2805908-2806038:-1:exon
so has part: feature:2801899-2803228:-1:exon
so has part: feature:2794254-2794460:-1:exon
so has part: feature:2791841-2791981:-1:exon
so has part: feature:2791473-2791568:-1:exon
so has part: feature:2791175-2791336:-1:exon
so has part: feature:2790071-2790229:-1:exon
so has part: feature:2785659-2785756:-1:exon
so has part: feature:2784335-2784460:-1:exon
so has part: feature:2782880-2783865:-1:exon
so has part: feature:2778632-2778797:-1:exon
so has part: feature:2777640-2777774:-1:exon
so has part: feature:2775499-2775577:-1:exon
so has part: feature:2772322-2775050:-1:exon

position:2806038:-1
position: 2806038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2805908-2806038:-1:exon

position:2805908:-1
position: 2805908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2801899-2803228:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2794254-2794460:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2791841-2791981:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2791473-2791568:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2791175-2791336:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2790071-2790229:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2785659-2785756:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2784335-2784460:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2782880-2783865:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2778632-2778797:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2777640-2777774:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2775499-2775577:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2772322-2775050:-1:exon

GARRE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: GARRE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: granule associated Rac and RHOG effector protein 1
translation: MYCCSAQESKMDYKRRFLLGGSKQKVQQHQQYQMPELGRTLSAPLASGTPSTPLVSPAAAGGCSHPASHTTPIADIQQGISKYLDALNVFCRTSTFLTDLFSSVFRNSHYSKAAMQLKDVQEHVMEAASRLTAAIKPEIAKMLMELSAGAANFKDQKEFSLQDIEVLGRCFLTVMQVHFQFLSQALQKVQPVAHSCFAEAVAQERKNVSGTGASNISPTNELEDAIRSWRGAAEATSRLRERGCDGCLAGIEVQQLFCSQSVAIPEHQLKELNVKIDSALQAYKVALESLGHCEYAMKAGFHLNPKAIEASLQGCCSEAEAQQTGRRQTPPQPIQCELPTVPVQIGSHFLKGISFNESAAENLKLKTHTMLQLIKEAGCHNGLTPRDDSPVTEVLNQVCPSTWRGACKTAVQLLFGQAGLVVVDTAQIENKEAYAPQISLEGSRIVVQVPSTWCLKEDPATMSLLQRSLDPEKTLGLVDVLYTAVFDIHRWKEGREQALPCIQIQLQREISDFGSQVDMPSGNGSKSSGGLQKTFSKLTSRFTKKTSCTSTSNTGSYSIPNTPSKNVFISSSSEEKAKMPTNMDARLQNILNIGNFPRTADALQPVQSTNNQLVNGFLVERRDSFFKPDDGKDDKGMNLPTDQEMQDVIDFLSGFNMGKSQQTSPMVKRRNSVASSTATEQKSGAVQQQPQSVSHTPLHPPQQGLSQQQSQKQQQQMQYYQHLLQPIGPQQRVPAKWLSNSSQQQSPAVGAGLSHINQWNNPGFSDLSSDLYSLGLVSSYMDNMMAEMLGQKPQGPRNNTWPNRDQTDGVFGMLGEILPFDPAVGSDPEFARYVAGVNQAMQQKRQAQHVRRPSTTRGNWPLPDDPHKTWPFPEYFTEGDVTNSWSGTQGDSASSSDETSSANGDSLFSMFSGPDLVAAVKQRRKHSSGEQEPSTLPSPPLLSAADDRSQDNKTKTWPPKAPWQHTSSVPSTLPSQSTSLYPMSSPVSQWSDTMQMLQSPMWASDCAPAASISSSFAYAQQQQQSQQASQHKQINKGFKSFPVKHERRPSYLHQY
SIO_010081: GARRE1
subclass of: SO_0000673
so part of: GARRE1
location: complement(join(2774733..2775050,2775499..2775577,2777640..2777774,2778632..2778797,2782880..2783865,2784335..2784460,2785659..2785756,2790071..2790229,2791175..2791336,2791473..2791568,2791841..2791981,2794254..2794460,2801899..2802393))
location: region:2774733-2802393:-1
so has part: feature:2801899-2802393:-1:exon
so has part: feature:2794254-2794460:-1:exon
so has part: feature:2791841-2791981:-1:exon
so has part: feature:2791473-2791568:-1:exon
so has part: feature:2791175-2791336:-1:exon
so has part: feature:2790071-2790229:-1:exon
so has part: feature:2785659-2785756:-1:exon
so has part: feature:2784335-2784460:-1:exon
so has part: feature:2782880-2783865:-1:exon
so has part: feature:2778632-2778797:-1:exon
so has part: feature:2777640-2777774:-1:exon
so has part: feature:2775499-2775577:-1:exon
so has part: feature:2774733-2775050:-1:exon

XP_032925733.1
type: Protein
SIO_000068: ncbiprotein

position:2774733:-1
position: 2774733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2802393:-1
position: 2802393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2801899-2802393:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2794254-2794460:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2791841-2791981:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2791473-2791568:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2791175-2791336:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2790071-2790229:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2785659-2785756:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2784335-2784460:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2782880-2783865:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2778632-2778797:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2777640-2777774:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2775499-2775577:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2774733-2775050:-1:exon

GARRE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: GARRE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: granule associated Rac and RHOG effector protein 1
translation: MYCCSAQESKMDYKRRFLLGGSKQKVQQHQQYQMPELGRTLSAPLASGTPSTPLVSPAAAGGCSHPASHTTPIADIQQGISKYLDALNVFCRTSTFLTDLFSSVFRNSHYSKAAMQLKDVQEHVMEAASRLTAAIKPEIAKMLMELSAGAANFKDQKEFSLQDIEVLGRCFLTVMQVHFQFLSQALQKVQPVAHSCFAEAVAQERKNVSGTGASNISPTNELEDAIRSWRGAAEATSRLRERGCDGCLAGIEVQQLFCSQSVAIPEHQLKELNVKIDSALQAYKVALESLGHCEYAMKAGFHLNPKAIEASLQGCCSEAEAQQTGRRQTPPQPIQCELPTVPVQIGSHFLKGISFNESAAENLKLKTHTMLQLIKEAGCHNGLTPRDDSPVTEVLNQVCPSTWRGACKTAVQLLFGQAGLVVVDTAQIENKEAYAPQISLEGSRIVVQVPSTWCLKEDPATMSLLQRSLDPEKTLGLVDVLYTAVFDIHRWKEGREQALPCIQIQLQREISDFGSQVDMPSGNGSKSSGGLQKTFSKLTSRFTKKTSCTSTSNTGSYSIPNTPSKNVFISSSSEEKAKMPTNMDARLQNILNIGNFPRTADALQPVQSTNNQLVNGFLVERRDSFFKPDDGKDDKGMNLPTDQEMQDVIDFLSGFNMGKSQQTSPMVKRRNSVASSTATEQKSGAVQQQPQSVSHTPLHPPQQGLSQQQSQKQQQQMQYYQHLLQPIGPQQRVPAKWLSNSSQQQSPAVGAGLSHINQWNNPGFSDLSSDLYSLGLVSSYMDNMMAEMLGQKPQGPRNNTWPNRDQTDGVFGMLGEILPFDPAVGSDPEFARYVAGVNQAMQQKRQAQHVRRPSTTRGNWPLPDDPHKTWPFPEYFTEGDVTNSWSGTQGDSASSSDETSSANGDSLFSMFSGPDLVAAVKQRRKHSSGEQEPSTLPSPPLLSAADDRSQDNKTKTWPPKAPWQHTSSVPSTLPSQSTSLYPMSSPVSQWSDTMQMLQSPMWASDCAPAASISSSFAYAQQQQQSQQASQHKQINKGFKSFPVKHERRPSYLHQY
SIO_010081: GARRE1
subclass of: SO_0000673
so part of: GARRE1
location: complement(join(2774733..2775050,2775499..2775577,2777640..2777774,2778632..2778797,2782880..2783865,2784335..2784460,2785659..2785756,2790071..2790229,2791175..2791336,2791473..2791568,2791841..2791981,2794254..2794460,2801899..2802393))
location: region:2774733-2802393:-1
so has part: feature:2801899-2802393:-1:exon
so has part: feature:2794254-2794460:-1:exon
so has part: feature:2791841-2791981:-1:exon
so has part: feature:2791473-2791568:-1:exon
so has part: feature:2791175-2791336:-1:exon
so has part: feature:2790071-2790229:-1:exon
so has part: feature:2785659-2785756:-1:exon
so has part: feature:2784335-2784460:-1:exon
so has part: feature:2782880-2783865:-1:exon
so has part: feature:2778632-2778797:-1:exon
so has part: feature:2777640-2777774:-1:exon
so has part: feature:2775499-2775577:-1:exon
so has part: feature:2774733-2775050:-1:exon

XP_032925734.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2801899-2802393:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2794254-2794460:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2791841-2791981:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2791473-2791568:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2791175-2791336:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2790071-2790229:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2785659-2785756:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2784335-2784460:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2782880-2783865:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2778632-2778797:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2777640-2777774:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2775499-2775577:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2774733-2775050:-1:exon

GARRE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: GARRE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: granule associated Rac and RHOG effector protein 1
translation: MYCCSAQESKMDYKRRFLLGGSKQKVQQHQQYQMPELGRTLSAPLASGTPSTPLVSPAAAGGCSHPASHTTPIADIQQGISKYLDALNVFCRTSTFLTDLFSSVFRNSHYSKAAMQLKDVQEHVMEAASRLTAAIKPEIAKMLMELSAGAANFKDQKEFSLQDIEVLGRCFLTVMQVHFQFLSQALQKVQPVAHSCFAEAVAQERKNVSGTGASNISPTNELEDAIRSWRGAAEATSRLRERGCDGCLAGIEVQQLFCSQSVAIPEHQLKELNVKIDSALQAYKVALESLGHCEYAMKAGFHLNPKAIEASLQGCCSEAEAQQTGRRQTPPQPIQCELPTVPVQIGSHFLKGISFNESAAENLKLKTHTMLQLIKEAGCHNGLTPRDDSPVTEVLNQVCPSTWRGACKTAVQLLFGQAGLVVVDTAQIENKEAYAPQISLEGSRIVVQVPSTWCLKEDPATMSLLQRSLDPEKTLGLVDVLYTAVFDIHRWKEGREQALPCIQIQLQREISDFGSQVDMPSGNGSKSSGGLQKTFSKLTSRFTKKTSCTSTSNTGSYSIPNTPSKNVFISSSSEEKAKMPTNMDARLQNILNIGNFPRTADALQPVQSTNNQLVNGFLVERRDSFFKPDDGKDDKGMNLPTDQEMQDVIDFLSGFNMGKSQQTSPMVKRRNSVASSTATEQKSGAVQQQPQSVSHTPLHPPQQGLSQQQSQKQQQQMQYYQHLLQPIGPQQRVPAKWLSNSSQQQSPAVGAGLSHINQWNNPGFSDLSSDLYSLGLVSSYMDNMMAEMLGQKPQGPRNNTWPNRDQTDGVFGMLGEILPFDPAVGSDPEFARYVAGVNQAMQQKRQAQHVRRPSTTRGNWPLPDDPHKTWPFPEYFTEGDVTNSWSGTQGDSASSSDETSSANGDSLFSMFSGPDLVAAVKQRRKHSSGEQEPSTLPSPPLLSAADDRSQDNKTKTWPPKAPWQHTSSVPSTLPSQSTSLYPMSSPVSQWSDTMQMLQSPMWASDCAPAASISSSFAYAQQQQQSQQASQHKQINKGFKSFPVKHERRPSYLHQY
SIO_010081: GARRE1
subclass of: SO_0000673
so part of: GARRE1
location: complement(join(2774733..2775050,2775499..2775577,2777640..2777774,2778632..2778797,2782880..2783865,2784335..2784460,2785659..2785756,2790071..2790229,2791175..2791336,2791473..2791568,2791841..2791981,2794254..2794460,2801899..2802393))
location: region:2774733-2802393:-1
so has part: feature:2801899-2802393:-1:exon
so has part: feature:2794254-2794460:-1:exon
so has part: feature:2791841-2791981:-1:exon
so has part: feature:2791473-2791568:-1:exon
so has part: feature:2791175-2791336:-1:exon
so has part: feature:2790071-2790229:-1:exon
so has part: feature:2785659-2785756:-1:exon
so has part: feature:2784335-2784460:-1:exon
so has part: feature:2782880-2783865:-1:exon
so has part: feature:2778632-2778797:-1:exon
so has part: feature:2777640-2777774:-1:exon
so has part: feature:2775499-2775577:-1:exon
so has part: feature:2774733-2775050:-1:exon

XP_032925735.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2801899-2802393:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2794254-2794460:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2791841-2791981:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2791473-2791568:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2791175-2791336:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2790071-2790229:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2785659-2785756:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2784335-2784460:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2782880-2783865:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2778632-2778797:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2777640-2777774:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2775499-2775577:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2774733-2775050:-1:exon

GPI
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: GPI
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2851381..2872227
location: region:2851381-2872227:1
so has part: feature:2851381-2872227:1:exon
subclass of: SO_0000010

117001467
type: Gene
SIO_000068: ncbigene

position:2851381:1
position: 2851381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2872227:1
position: 2872227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2851381-2872227:1:exon

GPI
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: GPI
product: glucose-6-phosphate isomerase
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069846.1
SIO_010081: GPI
subclass of: SO_0000673
so part of: GPI
location: join(2851381..2851611,2855410..2855500,2855876..2855944,2858669..2858788,2860615..2860698,2860784..2860930,2862610..2862681,2863643..2863687,2864461..2864514,2865410..2865470,2866948..2866991,2867216..2867368,2867677..2867806,2868171..2868247,2869085..2869213,2869620..2869695,2869787..2869853,2871184..2872227)
location: region:2851381-2872227:1
so has part: feature:2851381-2851611:1:exon
so has part: feature:2855410-2855500:1:exon
so has part: feature:2855876-2855944:1:exon
so has part: feature:2858669-2858788:1:exon
so has part: feature:2860615-2860698:1:exon
so has part: feature:2860784-2860930:1:exon
so has part: feature:2862610-2862681:1:exon
so has part: feature:2863643-2863687:1:exon
so has part: feature:2864461-2864514:1:exon
so has part: feature:2865410-2865470:1:exon
so has part: feature:2866948-2866991:1:exon
so has part: feature:2867216-2867368:1:exon
so has part: feature:2867677-2867806:1:exon
so has part: feature:2868171-2868247:1:exon
so has part: feature:2869085-2869213:1:exon
so has part: feature:2869620-2869695:1:exon
so has part: feature:2869787-2869853:1:exon
so has part: feature:2871184-2872227:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2851381-2851611:1:exon

position:2851611:1
position: 2851611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2855410-2855500:1:exon

position:2855410:1
position: 2855410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2855500:1
position: 2855500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2855876-2855944:1:exon

position:2855876:1
position: 2855876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2855944:1
position: 2855944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2858669-2858788:1:exon

position:2858669:1
position: 2858669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2858788:1
position: 2858788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2860615-2860698:1:exon

position:2860615:1
position: 2860615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2860698:1
position: 2860698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2860784-2860930:1:exon

position:2860784:1
position: 2860784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2860930:1
position: 2860930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2862610-2862681:1:exon

position:2862610:1
position: 2862610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2862681:1
position: 2862681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2863643-2863687:1:exon

position:2863643:1
position: 2863643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2863687:1
position: 2863687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2864461-2864514:1:exon

position:2864461:1
position: 2864461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2864514:1
position: 2864514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2865410-2865470:1:exon

position:2865410:1
position: 2865410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2865470:1
position: 2865470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2866948-2866991:1:exon

position:2866948:1
position: 2866948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2866991:1
position: 2866991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2867216-2867368:1:exon

position:2867216:1
position: 2867216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2867368:1
position: 2867368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2867677-2867806:1:exon

position:2867677:1
position: 2867677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2867806:1
position: 2867806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2868171-2868247:1:exon

position:2868171:1
position: 2868171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2868247:1
position: 2868247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2869085-2869213:1:exon

position:2869085:1
position: 2869085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2869213:1
position: 2869213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2869620-2869695:1:exon

position:2869620:1
position: 2869620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2869695:1
position: 2869695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2869787-2869853:1:exon

position:2869787:1
position: 2869787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2869853:1
position: 2869853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2871184-2872227:1:exon

position:2871184:1
position: 2871184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GPI
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: GPI
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphate isomerase
translation: MALSGDPHFKKLVEWHKANSSKLVLRQLFEADKDRFQKFSLTLNTDHGDILLDYSKNLITEEVMKMLIELAKSRGVESARERMFSGEKINFTENRAVLHIALRNRSNVPILVDGKDVVPEVNKVLDKMKHFCQRVRSGEWKGYTGKAITDVVNIGIGGSDLGPLMVTEALKPYSKGGPRVWFVSNIDGTHIAKTLAELKPDTTLFIIASKTFTTQETITNAETAKEWFLRAANDPSTVAKHFVALSTNAPKVKDFGIDPENMFEFWDWVGGRYSLWSAIGLSIALHIGFDNFESLLAGAHWMDNHFHTAPLEKNVPVLLAMLGVWYINCYGCETHALLPYDQYMHRFAAYFQQGDMESNGKYITKKGSRVDYSTGPIVWGEPGTNGQHAFYQLIHQGTRMIPCDFLIPVQTQHPIRNGLHHKILLANFLAQTEALMKGKTADEARKELQAAGLSGEALEKLLPHKVFEGNRPTNSIMFTKLNPFTLGAIIAMYEHKIFVQGVVWDINSYDQWGVELGKQLAKKIEPELESDAPVTSHDSSTNGLINFIKKHRA
SIO_010081: GPI
subclass of: SO_0000673
so part of: GPI
location: join(2851493..2851611,2855410..2855500,2855876..2855944,2858669..2858788,2860615..2860698,2860784..2860930,2862610..2862681,2863643..2863687,2864461..2864514,2865410..2865470,2866948..2866991,2867216..2867368,2867677..2867806,2868171..2868247,2869085..2869213,2869620..2869695,2869787..2869853,2871184..2871307)
location: region:2851493-2871307:1
so has part: feature:2851493-2851611:1:exon
so has part: feature:2855410-2855500:1:exon
so has part: feature:2855876-2855944:1:exon
so has part: feature:2858669-2858788:1:exon
so has part: feature:2860615-2860698:1:exon
so has part: feature:2860784-2860930:1:exon
so has part: feature:2862610-2862681:1:exon
so has part: feature:2863643-2863687:1:exon
so has part: feature:2864461-2864514:1:exon
so has part: feature:2865410-2865470:1:exon
so has part: feature:2866948-2866991:1:exon
so has part: feature:2867216-2867368:1:exon
so has part: feature:2867677-2867806:1:exon
so has part: feature:2868171-2868247:1:exon
so has part: feature:2869085-2869213:1:exon
so has part: feature:2869620-2869695:1:exon
so has part: feature:2869787-2869853:1:exon
so has part: feature:2871184-2871307:1:exon

XP_032925737.1
type: Protein
SIO_000068: ncbiprotein

position:2851493:1
position: 2851493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2871307:1
position: 2871307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2851493-2851611:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2855410-2855500:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2855876-2855944:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2858669-2858788:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2860615-2860698:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2860784-2860930:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2862610-2862681:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2863643-2863687:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2864461-2864514:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2865410-2865470:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2866948-2866991:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2867216-2867368:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2867677-2867806:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2868171-2868247:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2869085-2869213:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2869620-2869695:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2869787-2869853:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2871184-2871307:1:exon

LOC117001538
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117001538
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2926517..3009888)
location: region:2926517-3009888:-1
so has part: feature:2926517-3009888:-1:exon
subclass of: SO_0000010

117001538
type: Gene
SIO_000068: ncbigene

position:2926517:-1
position: 2926517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3009888:-1
position: 3009888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2926517-3009888:-1:exon

LOC117001538
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117001538
product: WT1 interacting protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 9 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033069957.1
SIO_010081: LOC117001538
subclass of: SO_0000673
so part of: LOC117001538
location: complement(join(2926517..2930585,2933733..2933801,2935463..2935514,2936576..2936706,2939093..2939155,2952260..2952327,2981192..2981293,3008201..3009888))
location: region:2926517-3009888:-1
so has part: feature:3008201-3009888:-1:exon
so has part: feature:2981192-2981293:-1:exon
so has part: feature:2952260-2952327:-1:exon
so has part: feature:2939093-2939155:-1:exon
so has part: feature:2936576-2936706:-1:exon
so has part: feature:2935463-2935514:-1:exon
so has part: feature:2933733-2933801:-1:exon
so has part: feature:2926517-2930585:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3008201-3009888:-1:exon

position:3008201:-1
position: 3008201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2981192-2981293:-1:exon

position:2981192:-1
position: 2981192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2981293:-1
position: 2981293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2952260-2952327:-1:exon

position:2952260:-1
position: 2952260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2952327:-1
position: 2952327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2939093-2939155:-1:exon

position:2939093:-1
position: 2939093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2939155:-1
position: 2939155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2936576-2936706:-1:exon

position:2936576:-1
position: 2936576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2936706:-1
position: 2936706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2935463-2935514:-1:exon

position:2935463:-1
position: 2935463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2935514:-1
position: 2935514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2933733-2933801:-1:exon

position:2933733:-1
position: 2933733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2933801:-1
position: 2933801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2926517-2930585:-1:exon

position:2930585:-1
position: 2930585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117001538
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117001538
product: WT1 interacting protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033069960.1
SIO_010081: LOC117001538
subclass of: SO_0000673
so part of: LOC117001538
location: complement(join(2926517..2930585,2933733..2933801,2935463..2935514,2936576..2936706,2939093..2939155,2952260..2952327,2981192..2981293,3008026..3008187))
location: region:2926517-3008187:-1
so has part: feature:3008026-3008187:-1:exon
so has part: feature:2981192-2981293:-1:exon
so has part: feature:2952260-2952327:-1:exon
so has part: feature:2939093-2939155:-1:exon
so has part: feature:2936576-2936706:-1:exon
so has part: feature:2935463-2935514:-1:exon
so has part: feature:2933733-2933801:-1:exon
so has part: feature:2926517-2930585:-1:exon

position:3008187:-1
position: 3008187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3008026-3008187:-1:exon

position:3008026:-1
position: 3008026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2981192-2981293:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2952260-2952327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2939093-2939155:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2936576-2936706:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2935463-2935514:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2933733-2933801:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2926517-2930585:-1:exon

LOC117001538
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117001538
product: WT1 interacting protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033069958.1
SIO_010081: LOC117001538
subclass of: SO_0000673
so part of: LOC117001538
location: complement(join(2926517..2930585,2933733..2933801,2935463..2935514,2936576..2936706,2939093..2939155,2952260..2952327,2981192..2981293,2989301..2989355))
location: region:2926517-2989355:-1
so has part: feature:2989301-2989355:-1:exon
so has part: feature:2981192-2981293:-1:exon
so has part: feature:2952260-2952327:-1:exon
so has part: feature:2939093-2939155:-1:exon
so has part: feature:2936576-2936706:-1:exon
so has part: feature:2935463-2935514:-1:exon
so has part: feature:2933733-2933801:-1:exon
so has part: feature:2926517-2930585:-1:exon

position:2989355:-1
position: 2989355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2989301-2989355:-1:exon

position:2989301:-1
position: 2989301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2981192-2981293:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2952260-2952327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2939093-2939155:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2936576-2936706:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2935463-2935514:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2933733-2933801:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2926517-2930585:-1:exon

LOC117001538
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117001538
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Wilms tumor protein 1-interacting protein isoform X1
translation: MEKYEEDMALKATKFMEDLSLYEPCPEGPYGRGGRRDLALHPDLEETKRVIAAHMTAEQRGRKMNGTAAPPPAEGFPAAAPCGKAAPLRANGRAAAEPPAGPPCCEEGLCTRSEVALPCYSGFTDKGKRYSAEGYRYAAGSAYEGGYVAKGGGRAAGGPDGKLGAASPRASLAAASSGPAAEHGKFSSPRSSLGGAVALPYEKFSSPRSSLVVPGQDKFGSPRASLVQYDGAALSPRSSYASTASDTSKHSSPRASLTGYDGGGSKPSSNRTSGISMGYDQRHASPRSSTASQYSCTASPRSSYSDCRYGPPGSAEPEGAGGPGLALASPRSSLCGPEGRGSAGPAVVSPRSSISSQSSRSSRGSMSAYPELQLPSPRSSLLGPGLPEDGAVPELGDVYHRIHAQSPPRHDQQHPAGAPEPPPPYAYSPTKGSASAPKFKLPYQVTPCRESGPSQAERRLEALTLELEKELEMHMKKEYFGICIKCGKGVYGASQACQAMGNLYHTNCFTCCSCGRRLRGKAFYNVNGKVYCEEDFLYSGFQQTADKCFVCGHLIMEMILQALGKSYHPGCFRCVVCNECLDGVPFTVDVENNIYCVKDYHTVFAPKCASCNQPILPAQGSEETIRVVSMDKDYHVECYHCEDCGLQLNDEEGHRCYPLEGHLLCHSCHIRRLNIKLPSHPPPSYPMHVTEL
SIO_010081: LOC117001538
subclass of: SO_0000673
so part of: LOC117001538
location: complement(join(2930433..2930585,2933733..2933801,2935463..2935514,2936576..2936706,2939093..2939155,2952260..2952327,2981192..2981293,3008201..3009641))
location: region:2930433-3009641:-1
so has part: feature:3008201-3009641:-1:exon
so has part: feature:2981192-2981293:-1:exon
so has part: feature:2952260-2952327:-1:exon
so has part: feature:2939093-2939155:-1:exon
so has part: feature:2936576-2936706:-1:exon
so has part: feature:2935463-2935514:-1:exon
so has part: feature:2933733-2933801:-1:exon
so has part: feature:2930433-2930585:-1:exon

XP_032925848.1
type: Protein
SIO_000068: ncbiprotein

position:2930433:-1
position: 2930433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3009641:-1
position: 3009641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3008201-3009641:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2981192-2981293:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2952260-2952327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2939093-2939155:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2936576-2936706:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2935463-2935514:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2933733-2933801:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2930433-2930585:-1:exon

LOC117001538
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117001538
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Wilms tumor protein 1-interacting protein isoform X2
translation: MVGKLRLARSFMTKGICIKCGKGVYGASQACQAMGNLYHTNCFTCCSCGRRLRGKAFYNVNGKVYCEEDFLYSGFQQTADKCFVCGHLIMEMILQALGKSYHPGCFRCVVCNECLDGVPFTVDVENNIYCVKDYHTVFAPKCASCNQPILPAQGSEETIRVVSMDKDYHVECYHCEDCGLQLNDEEGHRCYPLEGHLLCHSCHIRRLNIKLPSHPPPSYPMHVTEL
SIO_010081: LOC117001538
subclass of: SO_0000673
so part of: LOC117001538
location: complement(join(2930433..2930585,2933733..2933801,2935463..2935514,2936576..2936706,2939093..2939155,2952260..2952327,2981192..2981293,2989301..2989343))
location: region:2930433-2989343:-1
so has part: feature:2989301-2989343:-1:exon
so has part: feature:2981192-2981293:-1:exon
so has part: feature:2952260-2952327:-1:exon
so has part: feature:2939093-2939155:-1:exon
so has part: feature:2936576-2936706:-1:exon
so has part: feature:2935463-2935514:-1:exon
so has part: feature:2933733-2933801:-1:exon
so has part: feature:2930433-2930585:-1:exon

XP_032925849.1
type: Protein
SIO_000068: ncbiprotein

position:2989343:-1
position: 2989343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2989301-2989343:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2981192-2981293:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2952260-2952327:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2939093-2939155:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2936576-2936706:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2935463-2935514:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2933733-2933801:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2930433-2930585:-1:exon

LOC117001538
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117001538
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Wilms tumor protein 1-interacting protein isoform X3
translation: MGNLYHTNCFTCCSCGRRLRGKAFYNVNGKVYCEEDFLYSGFQQTADKCFVCGHLIMEMILQALGKSYHPGCFRCVVCNECLDGVPFTVDVENNIYCVKDYHTVFAPKCASCNQPILPAQGSEETIRVVSMDKDYHVECYHCEDCGLQLNDEEGHRCYPLEGHLLCHSCHIRRLNIKLPSHPPPSYPMHVTEL
SIO_010081: LOC117001538
subclass of: SO_0000673
so part of: LOC117001538
location: complement(join(2930433..2930585,2933733..2933801,2935463..2935514,2936576..2936706,2939093..2939155,2952260..2952327,2981192..2981237))
location: region:2930433-2981237:-1
so has part: feature:2981192-2981237:-1:exon
so has part: feature:2952260-2952327:-1:exon
so has part: feature:2939093-2939155:-1:exon
so has part: feature:2936576-2936706:-1:exon
so has part: feature:2935463-2935514:-1:exon
so has part: feature:2933733-2933801:-1:exon
so has part: feature:2930433-2930585:-1:exon

XP_032925851.1
type: Protein
SIO_000068: ncbiprotein

position:2981237:-1
position: 2981237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2981192-2981237:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2952260-2952327:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2939093-2939155:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2936576-2936706:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2935463-2935514:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2933733-2933801:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2930433-2930585:-1:exon

UBA2
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: UBA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3018190..3035141)
location: region:3018190-3035141:-1
so has part: feature:3018190-3035141:-1:exon
subclass of: SO_0000010

117001299
type: Gene
SIO_000068: ncbigene

position:3018190:-1
position: 3018190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3035141:-1
position: 3035141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3018190-3035141:-1:exon

UBA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: UBA2
product: ubiquitin like modifier activating enzyme 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069514.1
SIO_010081: UBA2
subclass of: SO_0000673
so part of: UBA2
location: complement(join(3018190..3019509,3020392..3020528,3021310..3021415,3021959..3022055,3022607..3022762,3023218..3023330,3023421..3023514,3024421..3024581,3025104..3025203,3025979..3026100,3028332..3028399,3029058..3029179,3029324..3029424,3029856..3029920,3031065..3031135,3031404..3031487,3034981..3035141))
location: region:3018190-3035141:-1
so has part: feature:3034981-3035141:-1:exon
so has part: feature:3031404-3031487:-1:exon
so has part: feature:3031065-3031135:-1:exon
so has part: feature:3029856-3029920:-1:exon
so has part: feature:3029324-3029424:-1:exon
so has part: feature:3029058-3029179:-1:exon
so has part: feature:3028332-3028399:-1:exon
so has part: feature:3025979-3026100:-1:exon
so has part: feature:3025104-3025203:-1:exon
so has part: feature:3024421-3024581:-1:exon
so has part: feature:3023421-3023514:-1:exon
so has part: feature:3023218-3023330:-1:exon
so has part: feature:3022607-3022762:-1:exon
so has part: feature:3021959-3022055:-1:exon
so has part: feature:3021310-3021415:-1:exon
so has part: feature:3020392-3020528:-1:exon
so has part: feature:3018190-3019509:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3034981-3035141:-1:exon

position:3034981:-1
position: 3034981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3031404-3031487:-1:exon

position:3031404:-1
position: 3031404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3031487:-1
position: 3031487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3031065-3031135:-1:exon

position:3031065:-1
position: 3031065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3031135:-1
position: 3031135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3029856-3029920:-1:exon

position:3029856:-1
position: 3029856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3029920:-1
position: 3029920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3029324-3029424:-1:exon

position:3029324:-1
position: 3029324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3029424:-1
position: 3029424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3029058-3029179:-1:exon

position:3029058:-1
position: 3029058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3029179:-1
position: 3029179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3028332-3028399:-1:exon

position:3028332:-1
position: 3028332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3028399:-1
position: 3028399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3025979-3026100:-1:exon

position:3025979:-1
position: 3025979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3026100:-1
position: 3026100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3025104-3025203:-1:exon

position:3025104:-1
position: 3025104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3025203:-1
position: 3025203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3024421-3024581:-1:exon

position:3024421:-1
position: 3024421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3024581:-1
position: 3024581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3023421-3023514:-1:exon

position:3023421:-1
position: 3023421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3023514:-1
position: 3023514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3023218-3023330:-1:exon

position:3023218:-1
position: 3023218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3023330:-1
position: 3023330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3022607-3022762:-1:exon

position:3022607:-1
position: 3022607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3022762:-1
position: 3022762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3021959-3022055:-1:exon

position:3021959:-1
position: 3021959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3022055:-1
position: 3022055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3021310-3021415:-1:exon

position:3021310:-1
position: 3021310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3021415:-1
position: 3021415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3020392-3020528:-1:exon

position:3020392:-1
position: 3020392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3020528:-1
position: 3020528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3018190-3019509:-1:exon

position:3019509:-1
position: 3019509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UBA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: UBA2
product: ubiquitin like modifier activating enzyme 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069515.1
SIO_010081: UBA2
subclass of: SO_0000673
so part of: UBA2
location: complement(join(3018190..3019509,3020392..3020528,3021310..3021415,3021959..3022055,3022607..3022762,3023218..3023330,3023421..3023514,3024421..3024581,3025104..3025203,3025979..3026100,3028332..3028399,3029058..3029179,3029324..3029424,3029856..3029920,3031404..3031477))
location: region:3018190-3031477:-1
so has part: feature:3031404-3031477:-1:exon
so has part: feature:3029856-3029920:-1:exon
so has part: feature:3029324-3029424:-1:exon
so has part: feature:3029058-3029179:-1:exon
so has part: feature:3028332-3028399:-1:exon
so has part: feature:3025979-3026100:-1:exon
so has part: feature:3025104-3025203:-1:exon
so has part: feature:3024421-3024581:-1:exon
so has part: feature:3023421-3023514:-1:exon
so has part: feature:3023218-3023330:-1:exon
so has part: feature:3022607-3022762:-1:exon
so has part: feature:3021959-3022055:-1:exon
so has part: feature:3021310-3021415:-1:exon
so has part: feature:3020392-3020528:-1:exon
so has part: feature:3018190-3019509:-1:exon

position:3031477:-1
position: 3031477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3031404-3031477:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3029856-3029920:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3029324-3029424:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3029058-3029179:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3028332-3028399:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3025979-3026100:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3025104-3025203:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3024421-3024581:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3023421-3023514:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3023218-3023330:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3022607-3022762:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3021959-3022055:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3021310-3021415:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3020392-3020528:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3018190-3019509:-1:exon

UBA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: UBA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SUMO-activating enzyme subunit 2 isoform X1
translation: MAAALSGPLSPELAQAVSQARVLVVGAGGIGCELLKNLVLTGFSSIYVIDLDTIDVSNLNRQFLFQKKHVGRSKSQVAKESVLQFCPEANIIAYHDSIMNPDYNVEFFRQFTLVMNALDNRAARNHVNRMCLAADIPLIESGTAGYLGQVTVIKKGVTECYECQPKPTQKTFPGCTIRNTPSEPIHCIVWAKYLFNQLFGEEDADQEVSPDRADPEAAWEPAEAEARALASNEDGEIKRVSTKEWAKSTGYDPVKLFTKLFKDDIRYLLTMDKLWRKRKPPVPLDWAEVQKQEQNKSDQQNESSAVLKDQQVLNVRSYADLFSKSVKTLSLHLAEKADGEALIWDKDDPSAMDFVTSAANLRMHVFGMNMKSRFDIKSMAGNIIPAIATTNAVIAGLIVLEGLKILSGKIDQCRTIFLNKQPNPRKKLLVPCALDPPNPNCYVCASKPEVTVKLNTHKVTVLTLQDKILKEKFAMVAPDVQIEDGKGTILISSEEGETEANNHRKLSDFGIRNGTRLQADDFLQDYTLLINVLHSEDLEKDVEFEVVGDTPERIGPKPSEPTSKNISNGSDDGAQPSTSTAPEQDDVVIVDSEDEGTSSNADDVENKSRKRKLEKGCECVGAKRSRAEQEQDDLMIVESEDEGAASSLGEEESRSHKRKLEEKGCECIGAKSVC
SIO_010081: UBA2
subclass of: SO_0000673
so part of: UBA2
location: complement(join(3019226..3019509,3020392..3020528,3021310..3021415,3021959..3022055,3022607..3022762,3023218..3023330,3023421..3023514,3024421..3024581,3025104..3025203,3025979..3026100,3028332..3028399,3029058..3029179,3029324..3029424,3029856..3029920,3031065..3031135,3031404..3031487,3034981..3035124))
location: region:3019226-3035124:-1
so has part: feature:3034981-3035124:-1:exon
so has part: feature:3031404-3031487:-1:exon
so has part: feature:3031065-3031135:-1:exon
so has part: feature:3029856-3029920:-1:exon
so has part: feature:3029324-3029424:-1:exon
so has part: feature:3029058-3029179:-1:exon
so has part: feature:3028332-3028399:-1:exon
so has part: feature:3025979-3026100:-1:exon
so has part: feature:3025104-3025203:-1:exon
so has part: feature:3024421-3024581:-1:exon
so has part: feature:3023421-3023514:-1:exon
so has part: feature:3023218-3023330:-1:exon
so has part: feature:3022607-3022762:-1:exon
so has part: feature:3021959-3022055:-1:exon
so has part: feature:3021310-3021415:-1:exon
so has part: feature:3020392-3020528:-1:exon
so has part: feature:3019226-3019509:-1:exon

XP_032925405.1
type: Protein
SIO_000068: ncbiprotein

position:3019226:-1
position: 3019226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3035124:-1
position: 3035124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3034981-3035124:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3031404-3031487:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3031065-3031135:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3029856-3029920:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3029324-3029424:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3029058-3029179:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3028332-3028399:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3025979-3026100:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3025104-3025203:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3024421-3024581:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3023421-3023514:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3023218-3023330:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3022607-3022762:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3021959-3022055:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3021310-3021415:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3020392-3020528:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3019226-3019509:-1:exon

UBA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: UBA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SUMO-activating enzyme subunit 2 isoform X2
translation: MSAISTDSFCFRRNMLEDQNHSPDYNVEFFRQFTLVMNALDNRAARNHVNRMCLAADIPLIESGTAGYLGQVTVIKKGVTECYECQPKPTQKTFPGCTIRNTPSEPIHCIVWAKYLFNQLFGEEDADQEVSPDRADPEAAWEPAEAEARALASNEDGEIKRVSTKEWAKSTGYDPVKLFTKLFKDDIRYLLTMDKLWRKRKPPVPLDWAEVQKQEQNKSDQQNESSAVLKDQQVLNVRSYADLFSKSVKTLSLHLAEKADGEALIWDKDDPSAMDFVTSAANLRMHVFGMNMKSRFDIKSMAGNIIPAIATTNAVIAGLIVLEGLKILSGKIDQCRTIFLNKQPNPRKKLLVPCALDPPNPNCYVCASKPEVTVKLNTHKVTVLTLQDKILKEKFAMVAPDVQIEDGKGTILISSEEGETEANNHRKLSDFGIRNGTRLQADDFLQDYTLLINVLHSEDLEKDVEFEVVGDTPERIGPKPSEPTSKNISNGSDDGAQPSTSTAPEQDDVVIVDSEDEGTSSNADDVENKSRKRKLEKGCECVGAKRSRAEQEQDDLMIVESEDEGAASSLGEEESRSHKRKLEEKGCECIGAKSVC
SIO_010081: UBA2
subclass of: SO_0000673
so part of: UBA2
location: complement(join(3019226..3019509,3020392..3020528,3021310..3021415,3021959..3022055,3022607..3022762,3023218..3023330,3023421..3023514,3024421..3024581,3025104..3025203,3025979..3026100,3028332..3028399,3029058..3029179,3029324..3029424,3029856..3029920,3031404..3031468))
location: region:3019226-3031468:-1
so has part: feature:3031404-3031468:-1:exon
so has part: feature:3029856-3029920:-1:exon
so has part: feature:3029324-3029424:-1:exon
so has part: feature:3029058-3029179:-1:exon
so has part: feature:3028332-3028399:-1:exon
so has part: feature:3025979-3026100:-1:exon
so has part: feature:3025104-3025203:-1:exon
so has part: feature:3024421-3024581:-1:exon
so has part: feature:3023421-3023514:-1:exon
so has part: feature:3023218-3023330:-1:exon
so has part: feature:3022607-3022762:-1:exon
so has part: feature:3021959-3022055:-1:exon
so has part: feature:3021310-3021415:-1:exon
so has part: feature:3020392-3020528:-1:exon
so has part: feature:3019226-3019509:-1:exon

XP_032925406.1
type: Protein
SIO_000068: ncbiprotein

position:3031468:-1
position: 3031468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3031404-3031468:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3029856-3029920:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3029324-3029424:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3029058-3029179:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3028332-3028399:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3025979-3026100:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3025104-3025203:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3024421-3024581:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3023421-3023514:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3023218-3023330:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3022607-3022762:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3021959-3022055:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3021310-3021415:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3020392-3020528:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3019226-3019509:-1:exon

PDCD2L
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: PDCD2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3036467..3041860)
location: region:3036467-3041860:-1
so has part: feature:3036467-3041860:-1:exon
subclass of: SO_0000010

117001521
type: Gene
SIO_000068: ncbigene

position:3036467:-1
position: 3036467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3041860:-1
position: 3041860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3036467-3041860:-1:exon

PDCD2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PDCD2L
product: programmed cell death 2 like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069936.1
SIO_010081: PDCD2L
subclass of: SO_0000673
so part of: PDCD2L
location: complement(join(3036467..3036623,3037126..3037274,3038865..3038978,3039981..3040372,3041303..3041372,3041502..3041665,3041750..3041860))
location: region:3036467-3041860:-1
so has part: feature:3041750-3041860:-1:exon
so has part: feature:3041502-3041665:-1:exon
so has part: feature:3041303-3041372:-1:exon
so has part: feature:3039981-3040372:-1:exon
so has part: feature:3038865-3038978:-1:exon
so has part: feature:3037126-3037274:-1:exon
so has part: feature:3036467-3036623:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3041750-3041860:-1:exon

position:3041750:-1
position: 3041750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3041502-3041665:-1:exon

position:3041502:-1
position: 3041502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3041665:-1
position: 3041665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3041303-3041372:-1:exon

position:3041303:-1
position: 3041303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3041372:-1
position: 3041372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3039981-3040372:-1:exon

position:3039981:-1
position: 3039981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3040372:-1
position: 3040372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3038865-3038978:-1:exon

position:3038865:-1
position: 3038865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3038978:-1
position: 3038978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3037126-3037274:-1:exon

position:3037126:-1
position: 3037126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3037274:-1
position: 3037274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3036467-3036623:-1:exon

position:3036623:-1
position: 3036623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PDCD2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PDCD2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: programmed cell death protein 2-like
translation: MAGGPPVLLGLRDAAMAGPVPAGPLPAWATNKLGGTADWVPAVRAGPPRCARCGRALLLLVQVYCPLERGPAHRALHVFACAAPRCWGAARSWKVLRSQYSQAQDEQSRDVSVKQKQESNFAAKDWCEDADDWGACDGAEPPACASLELLGLKEAVSSEVECASQLQQLHLCEPAHGPAPQDTHPAASEEIAMAVAESAPVFQPFYINVVDEEDYMGLLDTDHADKLLKEYQQRECVDLEQMMSESFAGEGGNEKYEKSEVKSWDYTFHKFMKRISMCPEQILRYSWDGQPLFITCPPANLDRDIPACSNCGSSRVFEFQLMPTLVSMLQSDSDLSVEFGTVIVYTCERSCWPTNHQTPLEEFIFVQEDPDQRLFK
SIO_010081: PDCD2L
subclass of: SO_0000673
so part of: PDCD2L
location: complement(join(3036493..3036623,3037126..3037274,3038865..3038978,3039981..3040372,3041303..3041372,3041502..3041665,3041750..3041860))
location: region:3036493-3041860:-1
so has part: feature:3041750-3041860:-1:exon
so has part: feature:3041502-3041665:-1:exon
so has part: feature:3041303-3041372:-1:exon
so has part: feature:3039981-3040372:-1:exon
so has part: feature:3038865-3038978:-1:exon
so has part: feature:3037126-3037274:-1:exon
so has part: feature:3036493-3036623:-1:exon

XP_032925827.1
type: Protein
SIO_000068: ncbiprotein

position:3036493:-1
position: 3036493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3041750-3041860:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3041502-3041665:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3041303-3041372:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3039981-3040372:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3038865-3038978:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3037126-3037274:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3036493-3036623:-1:exon

LOC117001518
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117001518
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3042836..3055142)
location: region:3042836-3055142:-1
so has part: feature:3042836-3055142:-1:exon
subclass of: SO_0000010

117001518
type: Gene
SIO_000068: ncbigene

position:3042836:-1
position: 3042836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3055142:-1
position: 3055142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3042836-3055142:-1:exon

LOC117001518
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117001518
product: fatty acyl-CoA hydrolase precursor, medium chain-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033069933.1
SIO_010081: LOC117001518
subclass of: SO_0000673
so part of: LOC117001518
location: complement(join(3042836..3044755,3045175..3045247,3045577..3045708,3046893..3047040,3047997..3048083,3048168..3048308,3048793..3048846,3048993..3049082,3049911..3050012,3051232..3051385,3051722..3051855,3052297..3052441,3053273..3053465,3055054..3055142))
location: region:3042836-3055142:-1
so has part: feature:3055054-3055142:-1:exon
so has part: feature:3053273-3053465:-1:exon
so has part: feature:3052297-3052441:-1:exon
so has part: feature:3051722-3051855:-1:exon
so has part: feature:3051232-3051385:-1:exon
so has part: feature:3049911-3050012:-1:exon
so has part: feature:3048993-3049082:-1:exon
so has part: feature:3048793-3048846:-1:exon
so has part: feature:3048168-3048308:-1:exon
so has part: feature:3047997-3048083:-1:exon
so has part: feature:3046893-3047040:-1:exon
so has part: feature:3045577-3045708:-1:exon
so has part: feature:3045175-3045247:-1:exon
so has part: feature:3042836-3044755:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3055054-3055142:-1:exon

position:3055054:-1
position: 3055054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3053273-3053465:-1:exon

position:3053273:-1
position: 3053273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3053465:-1
position: 3053465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3052297-3052441:-1:exon

position:3052297:-1
position: 3052297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3052441:-1
position: 3052441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3051722-3051855:-1:exon

position:3051722:-1
position: 3051722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3051855:-1
position: 3051855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3051232-3051385:-1:exon

position:3051232:-1
position: 3051232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3051385:-1
position: 3051385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3049911-3050012:-1:exon

position:3049911:-1
position: 3049911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3050012:-1
position: 3050012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3048993-3049082:-1:exon

position:3048993:-1
position: 3048993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3049082:-1
position: 3049082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3048793-3048846:-1:exon

position:3048793:-1
position: 3048793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3048846:-1
position: 3048846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3048168-3048308:-1:exon

position:3048168:-1
position: 3048168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3048308:-1
position: 3048308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3047997-3048083:-1:exon

position:3047997:-1
position: 3047997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3048083:-1
position: 3048083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3046893-3047040:-1:exon

position:3046893:-1
position: 3046893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3047040:-1
position: 3047040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3045577-3045708:-1:exon

position:3045577:-1
position: 3045577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3045708:-1
position: 3045708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3045175-3045247:-1:exon

position:3045175:-1
position: 3045175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3045247:-1
position: 3045247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3042836-3044755:-1:exon

position:3044755:-1
position: 3044755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117001518
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117001518
product: fatty acyl-CoA hydrolase precursor, medium chain-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033069931.1
SIO_010081: LOC117001518
subclass of: SO_0000673
so part of: LOC117001518
location: complement(join(3042836..3044755,3045175..3045247,3045577..3045708,3046893..3047040,3047997..3048083,3048168..3048308,3048793..3048846,3048978..3049082,3049911..3050012,3051232..3051385,3051722..3051855,3052297..3052441,3053273..3053465,3055054..3055142))
location: region:3042836-3055142:-1
so has part: feature:3055054-3055142:-1:exon
so has part: feature:3053273-3053465:-1:exon
so has part: feature:3052297-3052441:-1:exon
so has part: feature:3051722-3051855:-1:exon
so has part: feature:3051232-3051385:-1:exon
so has part: feature:3049911-3050012:-1:exon
so has part: feature:3048978-3049082:-1:exon
so has part: feature:3048793-3048846:-1:exon
so has part: feature:3048168-3048308:-1:exon
so has part: feature:3047997-3048083:-1:exon
so has part: feature:3046893-3047040:-1:exon
so has part: feature:3045577-3045708:-1:exon
so has part: feature:3045175-3045247:-1:exon
so has part: feature:3042836-3044755:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3055054-3055142:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3053273-3053465:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3052297-3052441:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3051722-3051855:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3051232-3051385:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3049911-3050012:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3048978-3049082:-1:exon

position:3048978:-1
position: 3048978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3048793-3048846:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3048168-3048308:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3047997-3048083:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3046893-3047040:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3045577-3045708:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3045175-3045247:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3042836-3044755:-1:exon

LOC117001518
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117001518
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fatty acyl-CoA hydrolase precursor, medium chain-like isoform X2
translation: MASPRDTALLACILFVGGTALVAAEQPEAETKYGRVRGYQFNVDTAERTVNIFLGLPFAKPPVGSLRFSEPQPPEPWEGVRDATSYPPMCLQNKEQGQMFSDMITNRKEKVRLQVSEDCLYLNVYTPVPTGKQEKLPVLVWIHGGGLVFGAASSYDGSALAAFDNVVVVTIQYRLGITGYFSTGDEHARGNWGYLDQVAALQWIQENIIHFGGDPESVTIFGESAGGISVGALVVSPLAKGLFHKAISESGTVSLGLFTDQPKEEAQKIAAVAGCQKSSSAAMVECLRGKTEEELIQDMTTLQLCSNDSSGKCEQDFFFISSCVDGVFFPKSPRELLSEKSITTVPYIIGVNNCEFGWGLPMIMKYPPFVDGLDKDVAHQILQANLKKILKGPASEIADRVYKEYIGDAESPAQIRDGVLDAMGDLYFVISSVDVARHHRDAGNPVYFYEFQHRASSLDGLVPAFVKADHGAEIPFVFGKPFLAGGATKEEDKLSRTIMRYWTNFAKNGNPNGEGLVHWPQYDLEEKYLEIDLEQKVAEKLKEHRVEFWAQLMKQIQTGRRKYTEL
SIO_010081: LOC117001518
subclass of: SO_0000673
so part of: LOC117001518
location: complement(join(3044581..3044755,3045175..3045247,3045577..3045708,3046893..3047040,3047997..3048083,3048168..3048308,3048793..3048846,3048993..3049082,3049911..3050012,3051232..3051385,3051722..3051855,3052297..3052441,3053273..3053465,3055054..3055126))
location: region:3044581-3055126:-1
so has part: feature:3055054-3055126:-1:exon
so has part: feature:3053273-3053465:-1:exon
so has part: feature:3052297-3052441:-1:exon
so has part: feature:3051722-3051855:-1:exon
so has part: feature:3051232-3051385:-1:exon
so has part: feature:3049911-3050012:-1:exon
so has part: feature:3048993-3049082:-1:exon
so has part: feature:3048793-3048846:-1:exon
so has part: feature:3048168-3048308:-1:exon
so has part: feature:3047997-3048083:-1:exon
so has part: feature:3046893-3047040:-1:exon
so has part: feature:3045577-3045708:-1:exon
so has part: feature:3045175-3045247:-1:exon
so has part: feature:3044581-3044755:-1:exon

XP_032925824.1
type: Protein
SIO_000068: ncbiprotein

position:3044581:-1
position: 3044581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3055126:-1
position: 3055126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3055054-3055126:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3053273-3053465:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3052297-3052441:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3051722-3051855:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3051232-3051385:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3049911-3050012:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3048993-3049082:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3048793-3048846:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3048168-3048308:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3047997-3048083:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3046893-3047040:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3045577-3045708:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3045175-3045247:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3044581-3044755:-1:exon

LOC117001518
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117001518
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fatty acyl-CoA hydrolase precursor, medium chain-like isoform X1
translation: MASPRDTALLACILFVGGTALVAAEQPEAETKYGRVRGYQFNVDTAERTVNIFLGLPFAKPPVGSLRFSEPQPPEPWEGVRDATSYPPMCLQNKEQGQMFSDMITNRKEKVRLQVSEDCLYLNVYTPVPTGKQEKLPVLVWIHGGGLVFGAASSYDGSALAAFDNVVVVTIQYRLGITGYFSTGDEHARGNWGYLDQVAALQWIQENIIHFGGDPESVTIFGESAGGISVGALVVSPLAKGLFHKAISESGTVSLGLFTDQPKEEAQKIAAVAGCQKSSSAAMVECLRGKTEEELIQVTLKMDMTTLQLCSNDSSGKCEQDFFFISSCVDGVFFPKSPRELLSEKSITTVPYIIGVNNCEFGWGLPMIMKYPPFVDGLDKDVAHQILQANLKKILKGPASEIADRVYKEYIGDAESPAQIRDGVLDAMGDLYFVISSVDVARHHRDAGNPVYFYEFQHRASSLDGLVPAFVKADHGAEIPFVFGKPFLAGGATKEEDKLSRTIMRYWTNFAKNGNPNGEGLVHWPQYDLEEKYLEIDLEQKVAEKLKEHRVEFWAQLMKQIQTGRRKYTEL
SIO_010081: LOC117001518
subclass of: SO_0000673
so part of: LOC117001518
location: complement(join(3044581..3044755,3045175..3045247,3045577..3045708,3046893..3047040,3047997..3048083,3048168..3048308,3048793..3048846,3048978..3049082,3049911..3050012,3051232..3051385,3051722..3051855,3052297..3052441,3053273..3053465,3055054..3055126))
location: region:3044581-3055126:-1
so has part: feature:3055054-3055126:-1:exon
so has part: feature:3053273-3053465:-1:exon
so has part: feature:3052297-3052441:-1:exon
so has part: feature:3051722-3051855:-1:exon
so has part: feature:3051232-3051385:-1:exon
so has part: feature:3049911-3050012:-1:exon
so has part: feature:3048978-3049082:-1:exon
so has part: feature:3048793-3048846:-1:exon
so has part: feature:3048168-3048308:-1:exon
so has part: feature:3047997-3048083:-1:exon
so has part: feature:3046893-3047040:-1:exon
so has part: feature:3045577-3045708:-1:exon
so has part: feature:3045175-3045247:-1:exon
so has part: feature:3044581-3044755:-1:exon

XP_032925822.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3055054-3055126:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3053273-3053465:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3052297-3052441:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3051722-3051855:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3051232-3051385:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3049911-3050012:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3048978-3049082:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3048793-3048846:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3048168-3048308:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3047997-3048083:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3046893-3047040:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3045577-3045708:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3045175-3045247:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3044581-3044755:-1:exon

CES2
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: CES2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3061092..3070733)
location: region:3061092-3070733:-1
so has part: feature:3061092-3070733:-1:exon
subclass of: SO_0000010

117001279
type: Gene
SIO_000068: ncbigene

position:3061092:-1
position: 3061092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3070733:-1
position: 3070733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3061092-3070733:-1:exon

CES2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CES2
product: carboxylesterase 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069472.2
SIO_010081: CES2
subclass of: SO_0000673
so part of: CES2
location: complement(join(3061092..3061390,3061528..3061600,3063328..3063477,3064082..3064229,3064916..3064996,3066181..3066321,3066796..3066894,3067238..3067339,3067579..3067732,3068222..3068355,3068617..3068755,3069125..3069329,3070439..3070733))
location: region:3061092-3070733:-1
so has part: feature:3070439-3070733:-1:exon
so has part: feature:3069125-3069329:-1:exon
so has part: feature:3068617-3068755:-1:exon
so has part: feature:3068222-3068355:-1:exon
so has part: feature:3067579-3067732:-1:exon
so has part: feature:3067238-3067339:-1:exon
so has part: feature:3066796-3066894:-1:exon
so has part: feature:3066181-3066321:-1:exon
so has part: feature:3064916-3064996:-1:exon
so has part: feature:3064082-3064229:-1:exon
so has part: feature:3063328-3063477:-1:exon
so has part: feature:3061528-3061600:-1:exon
so has part: feature:3061092-3061390:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3070439-3070733:-1:exon

position:3070439:-1
position: 3070439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3069125-3069329:-1:exon

position:3069125:-1
position: 3069125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3069329:-1
position: 3069329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3068617-3068755:-1:exon

position:3068617:-1
position: 3068617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3068755:-1
position: 3068755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3068222-3068355:-1:exon

position:3068222:-1
position: 3068222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3068355:-1
position: 3068355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3067579-3067732:-1:exon

position:3067579:-1
position: 3067579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3067732:-1
position: 3067732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3067238-3067339:-1:exon

position:3067238:-1
position: 3067238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3067339:-1
position: 3067339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3066796-3066894:-1:exon

position:3066796:-1
position: 3066796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3066894:-1
position: 3066894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3066181-3066321:-1:exon

position:3066181:-1
position: 3066181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3066321:-1
position: 3066321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3064916-3064996:-1:exon

position:3064916:-1
position: 3064916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3064996:-1
position: 3064996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3064082-3064229:-1:exon

position:3064082:-1
position: 3064082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3064229:-1
position: 3064229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3063328-3063477:-1:exon

position:3063328:-1
position: 3063328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3063477:-1
position: 3063477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3061528-3061600:-1:exon

position:3061528:-1
position: 3061528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3061600:-1
position: 3061600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3061092-3061390:-1:exon

position:3061390:-1
position: 3061390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CES2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CES2
product: carboxylesterase 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069471.2
SIO_010081: CES2
subclass of: SO_0000673
so part of: CES2
location: complement(join(3061092..3061390,3061528..3061600,3063328..3063477,3064082..3064229,3064916..3064996,3066181..3066321,3066796..3066894,3067238..3067339,3067579..3067732,3068222..3068355,3068617..3068755,3069125..3069329,3069851..3070411))
location: region:3061092-3070411:-1
so has part: feature:3069851-3070411:-1:exon
so has part: feature:3069125-3069329:-1:exon
so has part: feature:3068617-3068755:-1:exon
so has part: feature:3068222-3068355:-1:exon
so has part: feature:3067579-3067732:-1:exon
so has part: feature:3067238-3067339:-1:exon
so has part: feature:3066796-3066894:-1:exon
so has part: feature:3066181-3066321:-1:exon
so has part: feature:3064916-3064996:-1:exon
so has part: feature:3064082-3064229:-1:exon
so has part: feature:3063328-3063477:-1:exon
so has part: feature:3061528-3061600:-1:exon
so has part: feature:3061092-3061390:-1:exon

position:3070411:-1
position: 3070411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3069851-3070411:-1:exon

position:3069851:-1
position: 3069851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3069125-3069329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3068617-3068755:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3068222-3068355:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3067579-3067732:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3067238-3067339:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3066796-3066894:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3066181-3066321:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3064916-3064996:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3064082-3064229:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3063328-3063477:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3061528-3061600:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3061092-3061390:-1:exon

CES2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CES2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cocaine esterase isoform X1
translation: MSPLSQIALLCALWCKAAFLVCGTEGQSGAEPEVATALGRLRGTQTNVKGTDKLVNVFLGIPFAKAPLGPLRFSPPEPPEPWTGLRDATSHPPLCPQDLSMLKTAEKNFKEKHLAFQTSEDCLYLSVYSPAGSSKKDKLPVMVWIHGGNFIFGGSARYDGSALSAYENVVVVIIQYRLGLLGYFNTGDEHARGNWAYLDQVAALRWIQGNIEHFGGDPASVTLFGVSAGSCSVFAHVLSPLSKGLFHKAISESGIIIPPSKNLDHAMDLEKIASIFQCETSSSLSLLNCLRKQEAEHIVHKSKEISFLPLVLDGVFLNKPPEEILAAKEFNAVPFMIGVTNNEFGWNIRSTSKIKSLREIGDRKSIASTVEVFLPMIDVPSDFLPMILDEYVGDTEDPAELRDGFLDLLGDMAIVMPAIRALNYHRESGAPTYFFEFQHRASAYWDSKPAYVKADHGDEVGFVFGGPFLAGDIQLRSEVTEEEKNLSRTLMKYWANFARNGNPNGEGLVEWPSYNLNEEYLQINLQQKKDRKLKEKKVEFWKKVILEKTNKKSTQNKKFKLEL
SIO_010081: CES2
subclass of: SO_0000673
so part of: CES2
location: complement(join(3061201..3061390,3061528..3061600,3063328..3063477,3064082..3064229,3064916..3064996,3066181..3066321,3066796..3066894,3067238..3067339,3067579..3067732,3068222..3068355,3068617..3068755,3069125..3069329,3069851..3069926))
location: region:3061201-3069926:-1
so has part: feature:3069851-3069926:-1:exon
so has part: feature:3069125-3069329:-1:exon
so has part: feature:3068617-3068755:-1:exon
so has part: feature:3068222-3068355:-1:exon
so has part: feature:3067579-3067732:-1:exon
so has part: feature:3067238-3067339:-1:exon
so has part: feature:3066796-3066894:-1:exon
so has part: feature:3066181-3066321:-1:exon
so has part: feature:3064916-3064996:-1:exon
so has part: feature:3064082-3064229:-1:exon
so has part: feature:3063328-3063477:-1:exon
so has part: feature:3061528-3061600:-1:exon
so has part: feature:3061201-3061390:-1:exon

XP_032925362.1
type: Protein
SIO_000068: ncbiprotein

position:3061201:-1
position: 3061201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3069926:-1
position: 3069926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3069851-3069926:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3069125-3069329:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3068617-3068755:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3068222-3068355:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3067579-3067732:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3067238-3067339:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3066796-3066894:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3066181-3066321:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3064916-3064996:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3064082-3064229:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3063328-3063477:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3061528-3061600:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3061201-3061390:-1:exon

CES2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CES2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cocaine esterase isoform X2
translation: MLKTAEKNFKEKHLAFQTSEDCLYLSVYSPAGSSKKDKLPVMVWIHGGNFIFGGSARYDGSALSAYENVVVVIIQYRLGLLGYFNTGDEHARGNWAYLDQVAALRWIQGNIEHFGGDPASVTLFGVSAGSCSVFAHVLSPLSKGLFHKAISESGIIIPPSKNLDHAMDLEKIASIFQCETSSSLSLLNCLRKQEAEHIVHKSKEISFLPLVLDGVFLNKPPEEILAAKEFNAVPFMIGVTNNEFGWNIRSTSKIKSLREIGDRKSIASTVEVFLPMIDVPSDFLPMILDEYVGDTEDPAELRDGFLDLLGDMAIVMPAIRALNYHRESGAPTYFFEFQHRASAYWDSKPAYVKADHGDEVGFVFGGPFLAGDIQLRSEVTEEEKNLSRTLMKYWANFARNGNPNGEGLVEWPSYNLNEEYLQINLQQKKDRKLKEKKVEFWKKVILEKTNKKSTQNKKFKLEL
SIO_010081: CES2
subclass of: SO_0000673
so part of: CES2
location: complement(join(3061201..3061390,3061528..3061600,3063328..3063477,3064082..3064229,3064916..3064996,3066181..3066321,3066796..3066894,3067238..3067339,3067579..3067732,3068222..3068355,3068617..3068736))
location: region:3061201-3068736:-1
so has part: feature:3068617-3068736:-1:exon
so has part: feature:3068222-3068355:-1:exon
so has part: feature:3067579-3067732:-1:exon
so has part: feature:3067238-3067339:-1:exon
so has part: feature:3066796-3066894:-1:exon
so has part: feature:3066181-3066321:-1:exon
so has part: feature:3064916-3064996:-1:exon
so has part: feature:3064082-3064229:-1:exon
so has part: feature:3063328-3063477:-1:exon
so has part: feature:3061528-3061600:-1:exon
so has part: feature:3061201-3061390:-1:exon

XP_032925363.1
type: Protein
SIO_000068: ncbiprotein

position:3068736:-1
position: 3068736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3068617-3068736:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3068222-3068355:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3067579-3067732:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3067238-3067339:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3066796-3066894:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3066181-3066321:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3064916-3064996:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3064082-3064229:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3063328-3063477:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3061528-3061600:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3061201-3061390:-1:exon

CIAO2B
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: CIAO2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3070823..3083173
location: region:3070823-3083173:1
so has part: feature:3070823-3083173:1:exon
subclass of: SO_0000010

117001281
type: Gene
SIO_000068: ncbigene

position:3070823:1
position: 3070823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3083173:1
position: 3083173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3070823-3083173:1:exon

CIAO2B
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 91951
gene: CIAO2B
product: cytosolic iron-sulfur assembly component 2B, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_004419007.2
SIO_010081: CIAO2B
so part of: CIAO2B
location: join(3070823..3071044,3071161..3071240,3071420..3071545,3072011..3072056,3072529..3072633,3079259..3080467,3083030..3083173)
location: region:3070823-3083173:1
so has part: feature:3070823-3071044:1:exon
so has part: feature:3071161-3071240:1:exon
so has part: feature:3071420-3071545:1:exon
so has part: feature:3072011-3072056:1:exon
so has part: feature:3072529-3072633:1:exon
so has part: feature:3079259-3080467:1:exon
so has part: feature:3083030-3083173:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3070823-3071044:1:exon

position:3071044:1
position: 3071044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3071161-3071240:1:exon

position:3071161:1
position: 3071161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3071240:1
position: 3071240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3071420-3071545:1:exon

position:3071420:1
position: 3071420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3071545:1
position: 3071545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3072011-3072056:1:exon

position:3072011:1
position: 3072011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3072056:1
position: 3072056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3072529-3072633:1:exon

position:3072529:1
position: 3072529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3072633:1
position: 3072633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3079259-3080467:1:exon

position:3079259:1
position: 3079259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3080467:1
position: 3080467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3083030-3083173:1:exon

position:3083030:1
position: 3083030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CIAO2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CIAO2B
product: cytosolic iron-sulfur assembly component 2B, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069475.2
SIO_010081: CIAO2B
subclass of: SO_0000673
so part of: CIAO2B
location: join(3070823..3071044,3071161..3071240,3071420..3071545,3072011..3072056,3072529..3072633,3083030..3083173)
location: region:3070823-3083173:1
so has part: feature:3070823-3071044:1:exon
so has part: feature:3071161-3071240:1:exon
so has part: feature:3071420-3071545:1:exon
so has part: feature:3072011-3072056:1:exon
so has part: feature:3072529-3072633:1:exon
so has part: feature:3083030-3083173:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3070823-3071044:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3071161-3071240:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3071420-3071545:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3072011-3072056:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3072529-3072633:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3083030-3083173:1:exon

CIAO2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CIAO2B
product: cytosolic iron-sulfur assembly component 2B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_033069476.2
SIO_010081: CIAO2B
subclass of: SO_0000673
so part of: CIAO2B
location: join(3070823..3071044,3071161..3071240,3071420..3071545,3072011..3072056,3072529..3072633,3076587..3077101)
location: region:3070823-3077101:1
so has part: feature:3070823-3071044:1:exon
so has part: feature:3071161-3071240:1:exon
so has part: feature:3071420-3071545:1:exon
so has part: feature:3072011-3072056:1:exon
so has part: feature:3072529-3072633:1:exon
so has part: feature:3076587-3077101:1:exon

position:3077101:1
position: 3077101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3070823-3071044:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3071161-3071240:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3071420-3071545:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3072011-3072056:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3072529-3072633:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3076587-3077101:1:exon

position:3076587:1
position: 3076587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CIAO2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CIAO2B
product: cytosolic iron-sulfur assembly component 2B, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069474.2
SIO_010081: CIAO2B
subclass of: SO_0000673
so part of: CIAO2B
location: join(3070823..3071044,3071161..3071240,3071420..3071545,3072011..3072056,3072529..3072748)
location: region:3070823-3072748:1
so has part: feature:3070823-3071044:1:exon
so has part: feature:3071161-3071240:1:exon
so has part: feature:3071420-3071545:1:exon
so has part: feature:3072011-3072056:1:exon
so has part: feature:3072529-3072748:1:exon

position:3072748:1
position: 3072748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3070823-3071044:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3071161-3071240:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3071420-3071545:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3072011-3072056:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3072529-3072748:1:exon

CIAO2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CIAO2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic iron-sulfur assembly component 2B
translation: MVGPGAAPLENANPLIYRRSGERPVTAREEDDELPDAIDDREIFDLIRSINDPEHPLTLEELNVVEQVRVKVNDAESTVSVEFTPTIPHCSMATLIGLSIKVKLLRSLPDRFKLDVHITPGTHASEHAVNKQLADKERVAAALENSHLLEVVNQCLTARS
SIO_010081: CIAO2B
subclass of: SO_0000673
so part of: CIAO2B
location: join(3070912..3071044,3071161..3071240,3071420..3071545,3072011..3072056,3072529..3072626)
location: region:3070912-3072626:1
so has part: feature:3070912-3071044:1:exon
so has part: feature:3071161-3071240:1:exon
so has part: feature:3071420-3071545:1:exon
so has part: feature:3072011-3072056:1:exon
so has part: feature:3072529-3072626:1:exon

XP_032925365.1
type: Protein
SIO_000068: ncbiprotein

position:3070912:1
position: 3070912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3072626:1
position: 3072626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3070912-3071044:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3071161-3071240:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3071420-3071545:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3072011-3072056:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3072529-3072626:1:exon

CIAO2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CIAO2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic iron-sulfur assembly component 2B
translation: MVGPGAAPLENANPLIYRRSGERPVTAREEDDELPDAIDDREIFDLIRSINDPEHPLTLEELNVVEQVRVKVNDAESTVSVEFTPTIPHCSMATLIGLSIKVKLLRSLPDRFKLDVHITPGTHASEHAVNKQLADKERVAAALENSHLLEVVNQCLTARS
SIO_010081: CIAO2B
subclass of: SO_0000673
so part of: CIAO2B
location: join(3070912..3071044,3071161..3071240,3071420..3071545,3072011..3072056,3072529..3072626)
location: region:3070912-3072626:1
so has part: feature:3070912-3071044:1:exon
so has part: feature:3071161-3071240:1:exon
so has part: feature:3071420-3071545:1:exon
so has part: feature:3072011-3072056:1:exon
so has part: feature:3072529-3072626:1:exon

XP_032925366.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3070912-3071044:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3071161-3071240:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3071420-3071545:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3072011-3072056:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3072529-3072626:1:exon

CIAO2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CIAO2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic iron-sulfur assembly component 2B
translation: MVGPGAAPLENANPLIYRRSGERPVTAREEDDELPDAIDDREIFDLIRSINDPEHPLTLEELNVVEQVRVKVNDAESTVSVEFTPTIPHCSMATLIGLSIKVKLLRSLPDRFKLDVHITPGTHASEHAVNKQLADKERVAAALENSHLLEVVNQCLTARS
SIO_010081: CIAO2B
subclass of: SO_0000673
so part of: CIAO2B
location: join(3070912..3071044,3071161..3071240,3071420..3071545,3072011..3072056,3072529..3072626)
location: region:3070912-3072626:1
so has part: feature:3070912-3071044:1:exon
so has part: feature:3071161-3071240:1:exon
so has part: feature:3071420-3071545:1:exon
so has part: feature:3072011-3072056:1:exon
so has part: feature:3072529-3072626:1:exon

XP_032925367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3070912-3071044:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3071161-3071240:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3071420-3071545:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3072011-3072056:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3072529-3072626:1:exon

LOC117001280
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117001280
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3073830..3076580)
location: region:3073830-3076580:-1
so has part: feature:3073830-3076580:-1:exon
subclass of: SO_0000010

117001280
type: Gene
SIO_000068: ncbigene

position:3073830:-1
position: 3073830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3076580:-1
position: 3076580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3073830-3076580:-1:exon

LOC117001280
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117001280
product: uncharacterized LOC117001280
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033069473.1
SIO_010081: LOC117001280
subclass of: SO_0000673
so part of: LOC117001280
location: complement(join(3073830..3075551,3075671..3076580))
location: region:3073830-3076580:-1
so has part: feature:3075671-3076580:-1:exon
so has part: feature:3073830-3075551:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3075671-3076580:-1:exon

position:3075671:-1
position: 3075671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3073830-3075551:-1:exon

position:3075551:-1
position: 3075551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117001280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117001280
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117001280
translation: MDSSAASLDTKLLSCFPATAEPEACRGCSRVGCWDSSGGILLPSRAAAVVWGSNTLQSRLVQGQHTQLPWEHTGVGNAIQTPLGAHRSGECHPDTLGAHRSGECHPDTPGSTQEWGMPSRYPGSTQEWGMPSRYAGSTLGVGNAIQIPLGAHRSGECHPDTPGSTLGVGNAIQTPLGAHRSGECHPDTLGAHRSEECHPDPWEHTGVGNAIQICWEHTGSGECHSDTPGSTQEWGMPSSHPWEHTGVGNAIQIPLGAHRSGECHPDTPGRLCPALRNLKQMSAPGIFPGLEQGCVQHSCSKGS
SIO_010081: LOC117001280
subclass of: SO_0000673
so part of: LOC117001280
location: complement(join(3074884..3075551,3075671..3075914))
location: region:3074884-3075914:-1
so has part: feature:3075671-3075914:-1:exon
so has part: feature:3074884-3075551:-1:exon

XP_032925364.1
type: Protein
SIO_000068: ncbiprotein

position:3074884:-1
position: 3074884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3075914:-1
position: 3075914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3075671-3075914:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3074884-3075551:-1:exon

RRAD
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: RRAD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3088332..3092653
location: region:3088332-3092653:1
so has part: feature:3088332-3092653:1:exon
subclass of: SO_0000010

117001693
type: Gene
SIO_000068: ncbigene

position:3088332:1
position: 3088332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3092653:1
position: 3092653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3088332-3092653:1:exon

RRAD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: RRAD
product: RRAD, Ras related glycolysis inhibitor and calcium channel regulator
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033070161.1
SIO_010081: RRAD
subclass of: SO_0000673
so part of: RRAD
location: join(3088332..3088454,3089063..3089400,3089529..3089602,3090109..3090313,3091780..3092653)
location: region:3088332-3092653:1
so has part: feature:3088332-3088454:1:exon
so has part: feature:3089063-3089400:1:exon
so has part: feature:3089529-3089602:1:exon
so has part: feature:3090109-3090313:1:exon
so has part: feature:3091780-3092653:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3088332-3088454:1:exon

position:3088454:1
position: 3088454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3089063-3089400:1:exon

position:3089063:1
position: 3089063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3089400:1
position: 3089400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3089529-3089602:1:exon

position:3089529:1
position: 3089529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3089602:1
position: 3089602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3090109-3090313:1:exon

position:3090109:1
position: 3090109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3090313:1
position: 3090313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3091780-3092653:1:exon

position:3091780:1
position: 3091780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RRAD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: RRAD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTP-binding protein RAD
translation: MTLNRGDKRRGSTPFAAQQHLHRRSMPVDERDLRALPPEELSGLVRCTSYSPGGEHRQSWASDSSDSVISSGSDSDGSLYKVILLGEHGVGKTSLARIFGGVEDCAEAEEAGNTYDRSIIVDGEEASLVVFDIWEQDDSQWLQNHCMKMGDAYIIVYSVTDKVSFEKASELRIQLRRARQTEDIPIILVGNKSDLVRSREVSVDEGRACAVVFDCKFIETSAALHHNVKDLFEGIVRQIRLRKDSKEDNARRMANTKRRESISKKAKRFLGRIVAKNNKKMAFKAKSKSCHDLSVL
SIO_010081: RRAD
subclass of: SO_0000673
so part of: RRAD
location: join(3089067..3089400,3089529..3089602,3090109..3090313,3091780..3092057)
location: region:3089067-3092057:1
so has part: feature:3089067-3089400:1:exon
so has part: feature:3089529-3089602:1:exon
so has part: feature:3090109-3090313:1:exon
so has part: feature:3091780-3092057:1:exon

XP_032926052.1
type: Protein
SIO_000068: ncbiprotein

position:3089067:1
position: 3089067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3092057:1
position: 3092057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3089067-3089400:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3089529-3089602:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3090109-3090313:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3091780-3092057:1:exon

PDP2
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: PDP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3198517..3203258)
location: region:3198517-3203258:-1
so has part: feature:3198517-3203258:-1:exon
subclass of: SO_0000010

117001600
type: Gene
SIO_000068: ncbigene

position:3198517:-1
position: 3198517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3203258:-1
position: 3203258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3198517-3203258:-1:exon

PDP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PDP2
product: pyruvate dehyrogenase phosphatase catalytic subunit 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033070033.1
SIO_010081: PDP2
subclass of: SO_0000673
so part of: PDP2
location: complement(join(3198517..3200604,3203163..3203258))
location: region:3198517-3203258:-1
so has part: feature:3203163-3203258:-1:exon
so has part: feature:3198517-3200604:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3203163-3203258:-1:exon

position:3203163:-1
position: 3203163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3198517-3200604:-1:exon

position:3200604:-1
position: 3200604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PDP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PDP2
product: pyruvate dehyrogenase phosphatase catalytic subunit 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033070034.1
SIO_010081: PDP2
subclass of: SO_0000673
so part of: PDP2
location: complement(join(3198517..3200604,3203040..3203254))
location: region:3198517-3203254:-1
so has part: feature:3203040-3203254:-1:exon
so has part: feature:3198517-3200604:-1:exon

position:3203254:-1
position: 3203254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3203040-3203254:-1:exon

position:3203040:-1
position: 3203040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3198517-3200604:-1:exon

PDP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PDP2
product: pyruvate dehyrogenase phosphatase catalytic subunit 2, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033070035.1
SIO_010081: PDP2
subclass of: SO_0000673
so part of: PDP2
location: complement(join(3198517..3200606,3203048..3203130))
location: region:3198517-3203130:-1
so has part: feature:3203048-3203130:-1:exon
so has part: feature:3198517-3200606:-1:exon

position:3203130:-1
position: 3203130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3203048-3203130:-1:exon

position:3203048:-1
position: 3203048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3198517-3200606:-1:exon

position:3200606:-1
position: 3200606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PDP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: PDP2
product: pyruvate dehyrogenase phosphatase catalytic subunit 2, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033070036.2
SIO_010081: PDP2
subclass of: SO_0000673
so part of: PDP2
location: complement(join(3198517..3200604,3202236..3202521))
location: region:3198517-3202521:-1
so has part: feature:3202236-3202521:-1:exon
so has part: feature:3198517-3200604:-1:exon

position:3202521:-1
position: 3202521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3202236-3202521:-1:exon

position:3202236:-1
position: 3202236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3198517-3200604:-1:exon

PDP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PDP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyruvate dehydrogenase [acetyl-transferring]-phosphatase 2, mitochondrial
translation: MMSRTVSSWVLSSARNSIILQGKGRQYSICIPNRNKIKWKLVFSKTCPYRAGSCSLDRTFSFPKAFRHTSTEEEHLAFQLSPSQINDILRAGELSHRTLGLNGKNTNSVLRFESNQLASNSPIEDRRSAATCLQTAGMMFGVFDGHAGAACAQAVSERLLHYIAVSLLPRQSLEEIELAVEAMKPVRPILQWHRHPSDVEYQEITSQYFENLRVYWQHLLDLDAEPGFSLEEAMICAFKRLDSDISLEVQAPQENELMRNIALQVAFSGATACVAHIDGVHLHVANTGDCRAVLGVQEEDGTWSTVPLTRDHNAYDEFEIRRLKREHPRSEEKTLFVNDRLLGILMPSRAFGDVQLKWSKELQHSILENSCDVEALNIYQYVPPNYHTPPYLTAEPEVTYHKLRSKDKFLVIASDGLWEMLSNEKVVQLVAGHLTELNMQKPPLTFKKPVNLGYMHNLLLQRKSKGLASLDQNIATHLIRHAIGSNEYGEVDPEKLAAMLTLPEDLARMYRDDITVTVVYFNSEAIGEYYRNHE
SIO_010081: PDP2
subclass of: SO_0000673
so part of: PDP2
location: complement(3198945..3200549)
location: region:3198945-3200549:-1
so has part: feature:3198945-3200549:-1:exon

XP_032925924.1
type: Protein
SIO_000068: ncbiprotein

position:3198945:-1
position: 3198945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3200549:-1
position: 3200549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3198945-3200549:-1:exon

PDP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PDP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyruvate dehydrogenase [acetyl-transferring]-phosphatase 2, mitochondrial
translation: MMSRTVSSWVLSSARNSIILQGKGRQYSICIPNRNKIKWKLVFSKTCPYRAGSCSLDRTFSFPKAFRHTSTEEEHLAFQLSPSQINDILRAGELSHRTLGLNGKNTNSVLRFESNQLASNSPIEDRRSAATCLQTAGMMFGVFDGHAGAACAQAVSERLLHYIAVSLLPRQSLEEIELAVEAMKPVRPILQWHRHPSDVEYQEITSQYFENLRVYWQHLLDLDAEPGFSLEEAMICAFKRLDSDISLEVQAPQENELMRNIALQVAFSGATACVAHIDGVHLHVANTGDCRAVLGVQEEDGTWSTVPLTRDHNAYDEFEIRRLKREHPRSEEKTLFVNDRLLGILMPSRAFGDVQLKWSKELQHSILENSCDVEALNIYQYVPPNYHTPPYLTAEPEVTYHKLRSKDKFLVIASDGLWEMLSNEKVVQLVAGHLTELNMQKPPLTFKKPVNLGYMHNLLLQRKSKGLASLDQNIATHLIRHAIGSNEYGEVDPEKLAAMLTLPEDLARMYRDDITVTVVYFNSEAIGEYYRNHE
SIO_010081: PDP2
subclass of: SO_0000673
so part of: PDP2
location: complement(3198945..3200549)
location: region:3198945-3200549:-1
so has part: feature:3198945-3200549:-1:exon

XP_032925925.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3198945-3200549:-1:exon

PDP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PDP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyruvate dehydrogenase [acetyl-transferring]-phosphatase 2, mitochondrial
translation: MMSRTVSSWVLSSARNSIILQGKGRQYSICIPNRNKIKWKLVFSKTCPYRAGSCSLDRTFSFPKAFRHTSTEEEHLAFQLSPSQINDILRAGELSHRTLGLNGKNTNSVLRFESNQLASNSPIEDRRSAATCLQTAGMMFGVFDGHAGAACAQAVSERLLHYIAVSLLPRQSLEEIELAVEAMKPVRPILQWHRHPSDVEYQEITSQYFENLRVYWQHLLDLDAEPGFSLEEAMICAFKRLDSDISLEVQAPQENELMRNIALQVAFSGATACVAHIDGVHLHVANTGDCRAVLGVQEEDGTWSTVPLTRDHNAYDEFEIRRLKREHPRSEEKTLFVNDRLLGILMPSRAFGDVQLKWSKELQHSILENSCDVEALNIYQYVPPNYHTPPYLTAEPEVTYHKLRSKDKFLVIASDGLWEMLSNEKVVQLVAGHLTELNMQKPPLTFKKPVNLGYMHNLLLQRKSKGLASLDQNIATHLIRHAIGSNEYGEVDPEKLAAMLTLPEDLARMYRDDITVTVVYFNSEAIGEYYRNHE
SIO_010081: PDP2
subclass of: SO_0000673
so part of: PDP2
location: complement(3198945..3200549)
location: region:3198945-3200549:-1
so has part: feature:3198945-3200549:-1:exon

XP_032925926.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3198945-3200549:-1:exon

PDP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: PDP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyruvate dehydrogenase [acetyl-transferring]-phosphatase 2, mitochondrial
translation: MMSRTVSSWVLSSARNSIILQGKGRQYSICIPNRNKIKWKLVFSKTCPYRAGSCSLDRTFSFPKAFRHTSTEEEHLAFQLSPSQINDILRAGELSHRTLGLNGKNTNSVLRFESNQLASNSPIEDRRSAATCLQTAGMMFGVFDGHAGAACAQAVSERLLHYIAVSLLPRQSLEEIELAVEAMKPVRPILQWHRHPSDVEYQEITSQYFENLRVYWQHLLDLDAEPGFSLEEAMICAFKRLDSDISLEVQAPQENELMRNIALQVAFSGATACVAHIDGVHLHVANTGDCRAVLGVQEEDGTWSTVPLTRDHNAYDEFEIRRLKREHPRSEEKTLFVNDRLLGILMPSRAFGDVQLKWSKELQHSILENSCDVEALNIYQYVPPNYHTPPYLTAEPEVTYHKLRSKDKFLVIASDGLWEMLSNEKVVQLVAGHLTELNMQKPPLTFKKPVNLGYMHNLLLQRKSKGLASLDQNIATHLIRHAIGSNEYGEVDPEKLAAMLTLPEDLARMYRDDITVTVVYFNSEAIGEYYRNHE
SIO_010081: PDP2
subclass of: SO_0000673
so part of: PDP2
location: complement(3198945..3200549)
location: region:3198945-3200549:-1
so has part: feature:3198945-3200549:-1:exon

XP_032925927.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3198945-3200549:-1:exon

CA7
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: CA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3209187..3219560)
location: region:3209187-3219560:-1
so has part: feature:3209187-3219560:-1:exon
subclass of: SO_0000010

117001607
type: Gene
SIO_000068: ncbigene

position:3209187:-1
position: 3209187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3219560:-1
position: 3219560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3209187-3219560:-1:exon

CA7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CA7
product: carbonic anhydrase 7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033070046.1
SIO_010081: CA7
subclass of: SO_0000673
so part of: CA7
location: complement(join(3209187..3210967,3211244..3211399,3212394..3212456,3212695..3212790,3213878..3213996,3217201..3217398,3219494..3219560))
location: region:3209187-3219560:-1
so has part: feature:3219494-3219560:-1:exon
so has part: feature:3217201-3217398:-1:exon
so has part: feature:3213878-3213996:-1:exon
so has part: feature:3212695-3212790:-1:exon
so has part: feature:3212394-3212456:-1:exon
so has part: feature:3211244-3211399:-1:exon
so has part: feature:3209187-3210967:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3219494-3219560:-1:exon

position:3219494:-1
position: 3219494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3217201-3217398:-1:exon

position:3217201:-1
position: 3217201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3217398:-1
position: 3217398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3213878-3213996:-1:exon

position:3213878:-1
position: 3213878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3213996:-1
position: 3213996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3212695-3212790:-1:exon

position:3212695:-1
position: 3212695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3212790:-1
position: 3212790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3212394-3212456:-1:exon

position:3212394:-1
position: 3212394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3212456:-1
position: 3212456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3211244-3211399:-1:exon

position:3211244:-1
position: 3211244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3211399:-1
position: 3211399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3209187-3210967:-1:exon

position:3210967:-1
position: 3210967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CA7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbonic anhydrase 7
translation: MTGHHSWGYGQADGPSEWHKAYPIAQGNRQSPIDIDSARAVYDPSLQPLVISYESCTSLSISNTGHSVMVEFEESDDRTAISGGPFQNPFRLKQFHFHWGTTHSQGSEHTIDGKPFPCELHLVHWNARKYATFGEAAAAPDGLAVVGVFLEIGKEHASMNRLTDALYMVKFKGTKAQFRGFNPKCLLPLSLDYWTYLGSLTTPPLNESVTWIVLKEPIRISVKQLEKFRMLLFTGEEDQRIQMANNFRPPQPLKGRIVRASFKA
SIO_010081: CA7
subclass of: SO_0000673
so part of: CA7
location: complement(join(3210845..3210967,3211244..3211399,3212394..3212456,3212695..3212790,3213878..3213996,3217201..3217398,3219494..3219533))
location: region:3210845-3219533:-1
so has part: feature:3219494-3219533:-1:exon
so has part: feature:3217201-3217398:-1:exon
so has part: feature:3213878-3213996:-1:exon
so has part: feature:3212695-3212790:-1:exon
so has part: feature:3212394-3212456:-1:exon
so has part: feature:3211244-3211399:-1:exon
so has part: feature:3210845-3210967:-1:exon

XP_032925937.1
type: Protein
SIO_000068: ncbiprotein

position:3210845:-1
position: 3210845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3219533:-1
position: 3219533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3219494-3219533:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3217201-3217398:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3213878-3213996:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3212695-3212790:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3212394-3212456:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3211244-3211399:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3210845-3210967:-1:exon

NAE1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: NAE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3226453..3239568
location: region:3226453-3239568:1
so has part: feature:3226453-3239568:1:exon
subclass of: SO_0000010

117001481
type: Gene
SIO_000068: ncbigene

position:3226453:1
position: 3226453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3239568:1
position: 3239568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3226453-3239568:1:exon

NAE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: NAE1
product: NEDD8 activating enzyme E1 subunit 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069876.1
SIO_010081: NAE1
subclass of: SO_0000673
so part of: NAE1
location: join(3226453..3226534,3228534..3228637,3228728..3228788,3229666..3229696,3230312..3230383,3230694..3230773,3231280..3231389,3231700..3231809,3232386..3232448,3232687..3232750,3233758..3233849,3234680..3234739,3234827..3234960,3235110..3235185,3235420..3235459,3236400..3236486,3237541..3237633,3238050..3238164,3238240..3238289,3239259..3239568)
location: region:3226453-3239568:1
so has part: feature:3226453-3226534:1:exon
so has part: feature:3228534-3228637:1:exon
so has part: feature:3228728-3228788:1:exon
so has part: feature:3229666-3229696:1:exon
so has part: feature:3230312-3230383:1:exon
so has part: feature:3230694-3230773:1:exon
so has part: feature:3231280-3231389:1:exon
so has part: feature:3231700-3231809:1:exon
so has part: feature:3232386-3232448:1:exon
so has part: feature:3232687-3232750:1:exon
so has part: feature:3233758-3233849:1:exon
so has part: feature:3234680-3234739:1:exon
so has part: feature:3234827-3234960:1:exon
so has part: feature:3235110-3235185:1:exon
so has part: feature:3235420-3235459:1:exon
so has part: feature:3236400-3236486:1:exon
so has part: feature:3237541-3237633:1:exon
so has part: feature:3238050-3238164:1:exon
so has part: feature:3238240-3238289:1:exon
so has part: feature:3239259-3239568:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3226453-3226534:1:exon

position:3226534:1
position: 3226534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3228534-3228637:1:exon

position:3228534:1
position: 3228534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3228637:1
position: 3228637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3228728-3228788:1:exon

position:3228728:1
position: 3228728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3228788:1
position: 3228788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3229666-3229696:1:exon

position:3229666:1
position: 3229666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3229696:1
position: 3229696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3230312-3230383:1:exon

position:3230312:1
position: 3230312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3230383:1
position: 3230383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3230694-3230773:1:exon

position:3230694:1
position: 3230694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3230773:1
position: 3230773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3231280-3231389:1:exon

position:3231280:1
position: 3231280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3231389:1
position: 3231389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3231700-3231809:1:exon

position:3231700:1
position: 3231700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3231809:1
position: 3231809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3232386-3232448:1:exon

position:3232386:1
position: 3232386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3232448:1
position: 3232448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3232687-3232750:1:exon

position:3232687:1
position: 3232687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3232750:1
position: 3232750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3233758-3233849:1:exon

position:3233758:1
position: 3233758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3233849:1
position: 3233849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3234680-3234739:1:exon

position:3234680:1
position: 3234680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3234739:1
position: 3234739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3234827-3234960:1:exon

position:3234827:1
position: 3234827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3234960:1
position: 3234960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3235110-3235185:1:exon

position:3235110:1
position: 3235110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3235185:1
position: 3235185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3235420-3235459:1:exon

position:3235420:1
position: 3235420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3235459:1
position: 3235459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3236400-3236486:1:exon

position:3236400:1
position: 3236400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3236486:1
position: 3236486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3237541-3237633:1:exon

position:3237541:1
position: 3237541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3237633:1
position: 3237633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3238050-3238164:1:exon

position:3238050:1
position: 3238050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3238164:1
position: 3238164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3238240-3238289:1:exon

position:3238240:1
position: 3238240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3238289:1
position: 3238289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3239259-3239568:1:exon

position:3239259:1
position: 3239259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NAE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: NAE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD8-activating enzyme E1 regulatory subunit
translation: MARPGRAGLKEQRYDRQLRLWGDHGQEALESAHVCVINATATGTEILKNLVLPGIGSFTIVDENRVSGEDVGNNFFLQKSHIGQNRAQSAMELLQELNSDVSGNFVEESPEKLLDNNPSFFNRFNLVVATQLPESTLLRLAEVLWNSNIPLLVCRTYGLVGYLRVVIKEHTVVESHPDNMLEDLRLDKPFPELTEHVQDYDLEHMDKKDHSHTPWIVIVAKYLTKWFNEKSEQLPKSYKEKEAFKELIRQGILKNENGTPEDEENFEEAIKNVNTALNRTEVPRGIEELFNDDCCLKLTEQSSSFWVLVRALKEFVANEGQGSLPVRGTIPDMMADSSKFIKLQNVYREKAKKDIAAVGNHAAKLLQSLGKAPESISERELKLFCSNAAFLRVVRCRSLAEEHSPNSYSKDTIISHMDNPDSEIVLYLMLRAVDRFYKQHGRYPGVYNYQVEDDIGKLKSCLTGFLQEHGLSVVVKDDYVHEFCRYGAAEPHAVAAFMGGAAAQEVIKVITGQFVIFNNTFIYSGMSQTSATFQL
SIO_010081: NAE1
subclass of: SO_0000673
so part of: NAE1
location: join(3226479..3226534,3228534..3228637,3228728..3228788,3229666..3229696,3230312..3230383,3230694..3230773,3231280..3231389,3231700..3231809,3232386..3232448,3232687..3232750,3233758..3233849,3234680..3234739,3234827..3234960,3235110..3235185,3235420..3235459,3236400..3236486,3237541..3237633,3238050..3238164,3238240..3238289,3239259..3239368)
location: region:3226479-3239368:1
so has part: feature:3226479-3226534:1:exon
so has part: feature:3228534-3228637:1:exon
so has part: feature:3228728-3228788:1:exon
so has part: feature:3229666-3229696:1:exon
so has part: feature:3230312-3230383:1:exon
so has part: feature:3230694-3230773:1:exon
so has part: feature:3231280-3231389:1:exon
so has part: feature:3231700-3231809:1:exon
so has part: feature:3232386-3232448:1:exon
so has part: feature:3232687-3232750:1:exon
so has part: feature:3233758-3233849:1:exon
so has part: feature:3234680-3234739:1:exon
so has part: feature:3234827-3234960:1:exon
so has part: feature:3235110-3235185:1:exon
so has part: feature:3235420-3235459:1:exon
so has part: feature:3236400-3236486:1:exon
so has part: feature:3237541-3237633:1:exon
so has part: feature:3238050-3238164:1:exon
so has part: feature:3238240-3238289:1:exon
so has part: feature:3239259-3239368:1:exon

XP_032925767.1
type: Protein
SIO_000068: ncbiprotein

position:3226479:1
position: 3226479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3239368:1
position: 3239368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3226479-3226534:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3228534-3228637:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3228728-3228788:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3229666-3229696:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3230312-3230383:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3230694-3230773:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3231280-3231389:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3231700-3231809:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3232386-3232448:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3232687-3232750:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3233758-3233849:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3234680-3234739:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3234827-3234960:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3235110-3235185:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3235420-3235459:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3236400-3236486:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3237541-3237633:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3238050-3238164:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3238240-3238289:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3239259-3239368:1:exon

TERB1
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: TERB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3241876..3261180
location: region:3241876-3261180:1
so has part: feature:3241876-3261180:1:exon
subclass of: SO_0000010

117001517
type: Gene
SIO_000068: ncbigene

position:3241876:1
position: 3241876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3261180:1
position: 3261180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3241876-3261180:1:exon

TERB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: TERB1
product: telomere repeat binding bouquet formation protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_042779637.1
SIO_010081: TERB1
subclass of: SO_0000673
so part of: TERB1
location: join(3241876..3241938,3243283..3243340,3244267..3244377,3244564..3244692,3245137..3245268,3245675..3245735,3245831..3245946,3246076..3246198,3246669..3246821,3248569..3248700,3250067..3250192,3251151..3251308,3252034..3252389,3253948..3254009,3254974..3255066,3256436..3256585,3257001..3257081,3258035..3258148,3258527..3258639,3259171..3259380,3260935..3261180)
location: region:3241876-3261180:1
so has part: feature:3241876-3241938:1:exon
so has part: feature:3243283-3243340:1:exon
so has part: feature:3244267-3244377:1:exon
so has part: feature:3244564-3244692:1:exon
so has part: feature:3245137-3245268:1:exon
so has part: feature:3245675-3245735:1:exon
so has part: feature:3245831-3245946:1:exon
so has part: feature:3246076-3246198:1:exon
so has part: feature:3246669-3246821:1:exon
so has part: feature:3248569-3248700:1:exon
so has part: feature:3250067-3250192:1:exon
so has part: feature:3251151-3251308:1:exon
so has part: feature:3252034-3252389:1:exon
so has part: feature:3253948-3254009:1:exon
so has part: feature:3254974-3255066:1:exon
so has part: feature:3256436-3256585:1:exon
so has part: feature:3257001-3257081:1:exon
so has part: feature:3258035-3258148:1:exon
so has part: feature:3258527-3258639:1:exon
so has part: feature:3259171-3259380:1:exon
so has part: feature:3260935-3261180:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3241876-3241938:1:exon

position:3241938:1
position: 3241938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3243283-3243340:1:exon

position:3243283:1
position: 3243283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3243340:1
position: 3243340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3244267-3244377:1:exon

position:3244267:1
position: 3244267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3244377:1
position: 3244377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3244564-3244692:1:exon

position:3244564:1
position: 3244564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3244692:1
position: 3244692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3245137-3245268:1:exon

position:3245137:1
position: 3245137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3245268:1
position: 3245268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3245675-3245735:1:exon

position:3245675:1
position: 3245675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3245735:1
position: 3245735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3245831-3245946:1:exon

position:3245831:1
position: 3245831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3245946:1
position: 3245946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3246076-3246198:1:exon

position:3246076:1
position: 3246076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3246198:1
position: 3246198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3246669-3246821:1:exon

position:3246669:1
position: 3246669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3246821:1
position: 3246821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3248569-3248700:1:exon

position:3248569:1
position: 3248569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3248700:1
position: 3248700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3250067-3250192:1:exon

position:3250067:1
position: 3250067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3250192:1
position: 3250192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3251151-3251308:1:exon

position:3251151:1
position: 3251151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3251308:1
position: 3251308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3252034-3252389:1:exon

position:3252034:1
position: 3252034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3252389:1
position: 3252389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3253948-3254009:1:exon

position:3253948:1
position: 3253948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3254009:1
position: 3254009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3254974-3255066:1:exon

position:3254974:1
position: 3254974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3255066:1
position: 3255066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3256436-3256585:1:exon

position:3256436:1
position: 3256436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3256585:1
position: 3256585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3257001-3257081:1:exon

position:3257001:1
position: 3257001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3257081:1
position: 3257081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3258035-3258148:1:exon

position:3258035:1
position: 3258035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3258148:1
position: 3258148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3258527-3258639:1:exon

position:3258527:1
position: 3258527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3258639:1
position: 3258639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3259171-3259380:1:exon

position:3259171:1
position: 3259171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3259380:1
position: 3259380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3260935-3261180:1:exon

position:3260935:1
position: 3260935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TERB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: TERB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomere repeats-binding bouquet formation protein 1
translation: MLVEANLVVCLSTLPCDATTENKNRDKTKMNTQKVQKYQCDMKTDLNLLLECLKYQMDCPLSQKEALITIYSICQQNSEASEYFREIGGLMFINDLAKSSVHCIVKEAALFTLGIIIESNVYCQQTLCTSALFEDLILFLIKKDSGVNLKRMSVYVILVLVSNNKNGQTYVRDTGCISLLLQLFRTTLSTSEKNLSDENTDPCYQLWSSVCSTLCACVNNPQNEDNQNICCSVFPYAKECLESCTEPGIVRPICSFLGLTVANNPYVQKYFVSIGGLDTLAKVLLELMHDSCLSLSSMKLAVVVTKTLDACIANNSAMGVVLAKYHTVSELLKLLSNETLSTGEKISIILTIGHCTEVCEENQCELLQNNGLPLMIQVLTESQDEELIKAATFVLQNCKQMTEQLSLKLYDNSLNVDSAEELDVQVRKSCLQDYWKKAEEILHKINSLEKEHDEERVQGEIFVDKSSVANSGALKSHEVDPAHSKKYTERTQKDVCCPQLTSKLNNQVLAPSVTSAPQKNETENTMDAASARQTEQRNIPCSVTELQTDSVPQSHNINRKTACGKNQSGLQAGEQLCKKPAETVRNMKQTCTSDQHLFCSEKTERVKSTSATSSSHKMADLRCLGCTAGLSLNSKTFTKMLQSSLHRCEQHRVILEAEERYRGELRRMAAGTHQNMMLAPVKKDRLHKEIPTFRSKKGSFQSILLTPNRRDKSNTSKRDEHSRNIRWTSNYNLTPAYEKSLRKTQDANLKRQRVKEMCSQKCQNLQENCTHSLDKDEGNEMCSLAMSMTPLKKRRARKDFTTEEINCLLKGVQKMGNHWNLILWSYPFQKGRTSVDLSKKYYRLQVQMKKAHKGHQ
SIO_010081: TERB1
subclass of: SO_0000673
so part of: TERB1
location: join(3241876..3241938,3243283..3243340,3244267..3244377,3244564..3244692,3245137..3245268,3245675..3245735,3245831..3245946,3246076..3246198,3246669..3246821,3248569..3248700,3250067..3250192,3251151..3251308,3252034..3252389,3253948..3254009,3254974..3255066,3256436..3256585,3257001..3257081,3258035..3258148,3258527..3258639,3259171..3259380,3260935..3260964)
location: region:3241876-3260964:1
so has part: feature:3241876-3241938:1:exon
so has part: feature:3243283-3243340:1:exon
so has part: feature:3244267-3244377:1:exon
so has part: feature:3244564-3244692:1:exon
so has part: feature:3245137-3245268:1:exon
so has part: feature:3245675-3245735:1:exon
so has part: feature:3245831-3245946:1:exon
so has part: feature:3246076-3246198:1:exon
so has part: feature:3246669-3246821:1:exon
so has part: feature:3248569-3248700:1:exon
so has part: feature:3250067-3250192:1:exon
so has part: feature:3251151-3251308:1:exon
so has part: feature:3252034-3252389:1:exon
so has part: feature:3253948-3254009:1:exon
so has part: feature:3254974-3255066:1:exon
so has part: feature:3256436-3256585:1:exon
so has part: feature:3257001-3257081:1:exon
so has part: feature:3258035-3258148:1:exon
so has part: feature:3258527-3258639:1:exon
so has part: feature:3259171-3259380:1:exon
so has part: feature:3260935-3260964:1:exon

XP_042635571.1
type: Protein
SIO_000068: ncbiprotein

position:3260964:1
position: 3260964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3241876-3241938:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3243283-3243340:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3244267-3244377:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3244564-3244692:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3245137-3245268:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3245675-3245735:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3245831-3245946:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3246076-3246198:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3246669-3246821:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3248569-3248700:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3250067-3250192:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3251151-3251308:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3252034-3252389:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3253948-3254009:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3254974-3255066:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3256436-3256585:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3257001-3257081:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3258035-3258148:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3258527-3258639:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3259171-3259380:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3260935-3260964:1:exon

DYNC1LI2
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: DYNC1LI2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3263337..3293303
location: region:3263337-3293303:1
so has part: feature:3263337-3293303:1:exon
subclass of: SO_0000010

117001242
type: Gene
SIO_000068: ncbigene

position:3263337:1
position: 3263337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3293303:1
position: 3293303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3263337-3293303:1:exon

DYNC1LI2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: DYNC1LI2
product: dynein cytoplasmic 1 light intermediate chain 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069395.1
SIO_010081: DYNC1LI2
subclass of: SO_0000673
so part of: DYNC1LI2
location: join(3263337..3263593,3264227..3264300,3264721..3264837,3271584..3271814,3278430..3278596,3278933..3279026,3279654..3279789,3280109..3280220,3280910..3280969,3282304..3282345,3282758..3282875,3283842..3283958,3290344..3293303)
location: region:3263337-3293303:1
so has part: feature:3263337-3263593:1:exon
so has part: feature:3264227-3264300:1:exon
so has part: feature:3264721-3264837:1:exon
so has part: feature:3271584-3271814:1:exon
so has part: feature:3278430-3278596:1:exon
so has part: feature:3278933-3279026:1:exon
so has part: feature:3279654-3279789:1:exon
so has part: feature:3280109-3280220:1:exon
so has part: feature:3280910-3280969:1:exon
so has part: feature:3282304-3282345:1:exon
so has part: feature:3282758-3282875:1:exon
so has part: feature:3283842-3283958:1:exon
so has part: feature:3290344-3293303:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3263337-3263593:1:exon

position:3263593:1
position: 3263593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3264227-3264300:1:exon

position:3264227:1
position: 3264227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3264300:1
position: 3264300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3264721-3264837:1:exon

position:3264721:1
position: 3264721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3264837:1
position: 3264837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3271584-3271814:1:exon

position:3271584:1
position: 3271584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3271814:1
position: 3271814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3278430-3278596:1:exon

position:3278430:1
position: 3278430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3278596:1
position: 3278596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3278933-3279026:1:exon

position:3278933:1
position: 3278933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3279026:1
position: 3279026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3279654-3279789:1:exon

position:3279654:1
position: 3279654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3279789:1
position: 3279789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3280109-3280220:1:exon

position:3280109:1
position: 3280109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3280220:1
position: 3280220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3280910-3280969:1:exon

position:3280910:1
position: 3280910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3280969:1
position: 3280969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3282304-3282345:1:exon

position:3282304:1
position: 3282304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3282345:1
position: 3282345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3282758-3282875:1:exon

position:3282758:1
position: 3282758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3282875:1
position: 3282875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3283842-3283958:1:exon

position:3283842:1
position: 3283842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3283958:1
position: 3283958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3290344-3293303:1:exon

position:3290344:1
position: 3290344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DYNC1LI2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: DYNC1LI2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoplasmic dynein 1 light intermediate chain 2
translation: MAPVLAEKKLLGPDGPGGAELPGEEDEGQNLWSSILSEVSTRSRSKLPSGKNILVFGDDGSGKTTLMAKIQGAEHGKKGRGLEYLYLNIHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLQDTIVVFVADMSRPWTVMESLQKWASVLQEHIDKMKIPPEEMRHMEQKFIKEFQEYVEPEEGYQGSPQRRGPSSGQEDEHVSLPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYREEHFDFIQSHIRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFQFTTPALVVEKDAVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQVFLMKQQSFLAKQPATPTRASESPARGPAGSPRTQGRAGPANVPSASPITSVKKPDPNIKNNAASEGVLASFFNSLLSKKTGSPGSPGAGGVQNTAKKSGQKTVLANAQEELDRITRKPDPMVTTNSPPTENEA
SIO_010081: DYNC1LI2
subclass of: SO_0000673
so part of: DYNC1LI2
location: join(3263499..3263593,3264227..3264300,3264721..3264837,3271584..3271814,3278430..3278596,3278933..3279026,3279654..3279789,3280109..3280220,3280910..3280969,3282304..3282345,3282758..3282875,3283842..3283958,3290344..3290450)
location: region:3263499-3290450:1
so has part: feature:3263499-3263593:1:exon
so has part: feature:3264227-3264300:1:exon
so has part: feature:3264721-3264837:1:exon
so has part: feature:3271584-3271814:1:exon
so has part: feature:3278430-3278596:1:exon
so has part: feature:3278933-3279026:1:exon
so has part: feature:3279654-3279789:1:exon
so has part: feature:3280109-3280220:1:exon
so has part: feature:3280910-3280969:1:exon
so has part: feature:3282304-3282345:1:exon
so has part: feature:3282758-3282875:1:exon
so has part: feature:3283842-3283958:1:exon
so has part: feature:3290344-3290450:1:exon

XP_032925286.1
type: Protein
SIO_000068: ncbiprotein

position:3263499:1
position: 3263499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3290450:1
position: 3290450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3263499-3263593:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3264227-3264300:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3264721-3264837:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3271584-3271814:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3278430-3278596:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3278933-3279026:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3279654-3279789:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3280109-3280220:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3280910-3280969:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3282304-3282345:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3282758-3282875:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3283842-3283958:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3290344-3290450:1:exon

LOC117001243
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117001243
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3291327..3303066)
location: region:3291327-3303066:-1
so has part: feature:3291327-3303066:-1:exon
subclass of: SO_0000011

117001243
type: Gene
SIO_000068: ncbigene

position:3291327:-1
position: 3291327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3303066:-1
position: 3303066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3291327-3303066:-1:exon

LOC117001243
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117001243
product: uncharacterized LOC117001243, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_004419000.2
SIO_010081: LOC117001243
subclass of: SO_0000673
so part of: LOC117001243
location: complement(join(3291327..3301805,3302164..3302422,3302768..3303066))
location: region:3291327-3303066:-1
so has part: feature:3302768-3303066:-1:exon
so has part: feature:3302164-3302422:-1:exon
so has part: feature:3291327-3301805:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3302768-3303066:-1:exon

position:3302768:-1
position: 3302768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3302164-3302422:-1:exon

position:3302164:-1
position: 3302164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3302422:-1
position: 3302422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3291327-3301805:-1:exon

position:3301805:-1
position: 3301805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117001243
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117001243
product: uncharacterized LOC117001243, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_004418999.2
SIO_010081: LOC117001243
subclass of: SO_0000673
so part of: LOC117001243
location: complement(join(3291327..3301933,3302164..3302422,3302768..3303066))
location: region:3291327-3303066:-1
so has part: feature:3302768-3303066:-1:exon
so has part: feature:3302164-3302422:-1:exon
so has part: feature:3291327-3301933:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3302768-3303066:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3302164-3302422:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3291327-3301933:-1:exon

position:3301933:-1
position: 3301933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117001243
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117001243
product: uncharacterized LOC117001243, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_004418998.2
SIO_010081: LOC117001243
subclass of: SO_0000673
so part of: LOC117001243
location: complement(join(3291327..3302422,3302768..3303066))
location: region:3291327-3303066:-1
so has part: feature:3302768-3303066:-1:exon
so has part: feature:3291327-3302422:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3302768-3303066:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3291327-3302422:-1:exon

CMTM4
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: CMTM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3303545..3330637
location: region:3303545-3330637:1
so has part: feature:3303545-3330637:1:exon
subclass of: SO_0000010

117001417
type: Gene
SIO_000068: ncbigene

position:3303545:1
position: 3303545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3330637:1
position: 3330637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3303545-3330637:1:exon

CMTM4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CMTM4
product: CKLF like MARVEL transmembrane domain containing 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033069752.2
SIO_010081: CMTM4
subclass of: SO_0000673
so part of: CMTM4
location: join(3303545..3303778,3321381..3321557,3329278..3329376,3330265..3330637)
location: region:3303545-3330637:1
so has part: feature:3303545-3303778:1:exon
so has part: feature:3321381-3321557:1:exon
so has part: feature:3329278-3329376:1:exon
so has part: feature:3330265-3330637:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3303545-3303778:1:exon

position:3303778:1
position: 3303778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3321381-3321557:1:exon

position:3321381:1
position: 3321381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3321557:1
position: 3321557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3329278-3329376:1:exon

position:3329278:1
position: 3329278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3329376:1
position: 3329376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3330265-3330637:1:exon

position:3330265:1
position: 3330265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CMTM4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CMTM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CKLF-like MARVEL transmembrane domain-containing protein 4
translation: MRNGDDLEGFDGEASSASMISAASSPYQPTTEPVSQRRGLGGLRCDLDYLRGTLGRLKLAEVLLALTAFICIETIMECSPCEGLYFFEFVSCSALVVTGALLLLFSLNLHTRIPQINWNLTDLVNTGLSTFFFFIASVVLAALNHKTGAEIAAVVFGFLAMAVYAVNTFVAVKKWQMSSRQQSSRQSSDYIRARTESREVVHRPEIQRLDA
SIO_010081: CMTM4
subclass of: SO_0000673
so part of: CMTM4
location: join(3303593..3303778,3321381..3321557,3329278..3329376,3330265..3330438)
location: region:3303593-3330438:1
so has part: feature:3303593-3303778:1:exon
so has part: feature:3321381-3321557:1:exon
so has part: feature:3329278-3329376:1:exon
so has part: feature:3330265-3330438:1:exon

XP_032925643.1
type: Protein
SIO_000068: ncbiprotein

position:3303593:1
position: 3303593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3330438:1
position: 3330438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3303593-3303778:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3321381-3321557:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3329278-3329376:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3330265-3330438:1:exon

CMTM3
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: CMTM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3340430..3356041)
location: region:3340430-3356041:-1
so has part: feature:3340430-3356041:-1:exon
subclass of: SO_0000010

117001212
type: Gene
SIO_000068: ncbigene

position:3340430:-1
position: 3340430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3356041:-1
position: 3356041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3340430-3356041:-1:exon

CMTM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CMTM3
product: CKLF like MARVEL transmembrane domain containing 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033069340.1
SIO_010081: CMTM3
subclass of: SO_0000673
so part of: CMTM3
location: complement(join(3340430..3340830,3345391..3345508,3346683..3346778,3348405..3348560,3355872..3356041))
location: region:3340430-3356041:-1
so has part: feature:3355872-3356041:-1:exon
so has part: feature:3348405-3348560:-1:exon
so has part: feature:3346683-3346778:-1:exon
so has part: feature:3345391-3345508:-1:exon
so has part: feature:3340430-3340830:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3355872-3356041:-1:exon

position:3355872:-1
position: 3355872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3348405-3348560:-1:exon

position:3348405:-1
position: 3348405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3348560:-1
position: 3348560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3346683-3346778:-1:exon

position:3346683:-1
position: 3346683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3346778:-1
position: 3346778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3345391-3345508:-1:exon

position:3345391:-1
position: 3345391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3345508:-1
position: 3345508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3340430-3340830:-1:exon

position:3340830:-1
position: 3340830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CMTM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CMTM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CKLF-like MARVEL transmembrane domain-containing protein 3 isoform X1
translation: MEDPESEGAAPPPGLSSLLPPREFLRSRKGQLLLAESVLSFIIFICYIASLAASFMMAPLLEFLLALFLFFAYASKLNEKFKGVHWPLADFLRCVTAAIIYFAISIAAVSKYSDGASKAAGVFGFAATIVFAVDFYITFNDLVTFLKQGSSDSPEGRKAEESLPGYRGRAAAVVVENSLGCWKAEHNWMLCSASTWFYSLSFC
SIO_010081: CMTM3
subclass of: SO_0000673
so part of: CMTM3
location: complement(join(3340700..3340830,3345391..3345508,3346683..3346778,3348405..3348560,3355872..3355982))
location: region:3340700-3355982:-1
so has part: feature:3355872-3355982:-1:exon
so has part: feature:3348405-3348560:-1:exon
so has part: feature:3346683-3346778:-1:exon
so has part: feature:3345391-3345508:-1:exon
so has part: feature:3340700-3340830:-1:exon

XP_032925231.1
type: Protein
SIO_000068: ncbiprotein

position:3340700:-1
position: 3340700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3355982:-1
position: 3355982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3355872-3355982:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3348405-3348560:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3346683-3346778:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3345391-3345508:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3340700-3340830:-1:exon

CMTM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CMTM3
product: CKLF like MARVEL transmembrane domain containing 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033069341.1
SIO_010081: CMTM3
subclass of: SO_0000673
so part of: CMTM3
location: complement(join(3341011..3341227,3345391..3345508,3346683..3346778,3348405..3348560,3355872..3356041))
location: region:3341011-3356041:-1
so has part: feature:3355872-3356041:-1:exon
so has part: feature:3348405-3348560:-1:exon
so has part: feature:3346683-3346778:-1:exon
so has part: feature:3345391-3345508:-1:exon
so has part: feature:3341011-3341227:-1:exon

position:3341011:-1
position: 3341011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3355872-3356041:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3348405-3348560:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3346683-3346778:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3345391-3345508:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3341011-3341227:-1:exon

position:3341227:-1
position: 3341227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CMTM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CMTM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CKLF-like MARVEL transmembrane domain-containing protein 3 isoform X2
translation: MEDPESEGAAPPPGLSSLLPPREFLRSRKGQLLLAESVLSFIIFICYIASLAASFMMAPLLEFLLALFLFFAYASKLNEKFKGVHWPLADFLRCVTAAIIYFAISIAAVSKYSDGASKAAGVFGFAATIVFAVDFYITFNDLVTFLKQGSSDSPEGRKAEAPAQPLPPGVPGPA
SIO_010081: CMTM3
subclass of: SO_0000673
so part of: CMTM3
location: complement(join(3341184..3341227,3345391..3345508,3346683..3346778,3348405..3348560,3355872..3355982))
location: region:3341184-3355982:-1
so has part: feature:3355872-3355982:-1:exon
so has part: feature:3348405-3348560:-1:exon
so has part: feature:3346683-3346778:-1:exon
so has part: feature:3345391-3345508:-1:exon
so has part: feature:3341184-3341227:-1:exon

XP_032925232.1
type: Protein
SIO_000068: ncbiprotein

position:3341184:-1
position: 3341184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3355872-3355982:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3348405-3348560:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3346683-3346778:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3345391-3345508:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3341184-3341227:-1:exon

CMTM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CMTM3
product: CKLF like MARVEL transmembrane domain containing 3, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069342.1
SIO_010081: CMTM3
subclass of: SO_0000673
so part of: CMTM3
location: complement(join(3342172..3343921,3345391..3345508,3346683..3346778,3348405..3348560,3355872..3356041))
location: region:3342172-3356041:-1
so has part: feature:3355872-3356041:-1:exon
so has part: feature:3348405-3348560:-1:exon
so has part: feature:3346683-3346778:-1:exon
so has part: feature:3345391-3345508:-1:exon
so has part: feature:3342172-3343921:-1:exon

position:3342172:-1
position: 3342172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3355872-3356041:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3348405-3348560:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3346683-3346778:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3345391-3345508:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3342172-3343921:-1:exon

position:3343921:-1
position: 3343921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CMTM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CMTM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CKLF-like MARVEL transmembrane domain-containing protein 3 isoform X3
translation: MEDPESEGAAPPPGLSSLLPPREFLRSRKGQLLLAESVLSFIIFICYIASLAASFMMAPLLEFLLALFLFFAYASKLNEKFKGVHWPLADFLRCVTAAIIYFAISIAAVSKYSDGASKAAGVFGFAATIVFAVDFYITFNDLVTFLKQGSSDSPEGRKAEDEDSDSDSD
SIO_010081: CMTM3
subclass of: SO_0000673
so part of: CMTM3
location: complement(join(3343893..3343921,3345391..3345508,3346683..3346778,3348405..3348560,3355872..3355982))
location: region:3343893-3355982:-1
so has part: feature:3355872-3355982:-1:exon
so has part: feature:3348405-3348560:-1:exon
so has part: feature:3346683-3346778:-1:exon
so has part: feature:3345391-3345508:-1:exon
so has part: feature:3343893-3343921:-1:exon

XP_032925233.1
type: Protein
SIO_000068: ncbiprotein

position:3343893:-1
position: 3343893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3355872-3355982:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3348405-3348560:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3346683-3346778:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3345391-3345508:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3343893-3343921:-1:exon

CMTM3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 91951
gene: CMTM3
product: CKLF like MARVEL transmembrane domain containing 3, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_004418980.1
SIO_010081: CMTM3
so part of: CMTM3
location: complement(join(3352599..3352856,3355872..3355957))
location: region:3352599-3355957:-1
so has part: feature:3355872-3355957:-1:exon
so has part: feature:3352599-3352856:-1:exon

position:3352599:-1
position: 3352599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3355957:-1
position: 3355957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3355872-3355957:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3352599-3352856:-1:exon

position:3352856:-1
position: 3352856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117001257
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117001257
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3356599..3359698)
location: region:3356599-3359698:-1
so has part: feature:3356599-3359698:-1:exon
subclass of: SO_0000010

117001257
type: Gene
SIO_000068: ncbigene

position:3356599:-1
position: 3356599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3359698:-1
position: 3359698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3356599-3359698:-1:exon

LOC117001257
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117001257
product: chemokine-like factor
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069437.2
SIO_010081: LOC117001257
subclass of: SO_0000673
so part of: LOC117001257
location: complement(join(3356599..3356987,3358588..3358683,3359483..3359698))
location: region:3356599-3359698:-1
so has part: feature:3359483-3359698:-1:exon
so has part: feature:3358588-3358683:-1:exon
so has part: feature:3356599-3356987:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3359483-3359698:-1:exon

position:3359483:-1
position: 3359483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3358588-3358683:-1:exon

position:3358588:-1
position: 3358588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3358683:-1
position: 3358683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3356599-3356987:-1:exon

position:3356987:-1
position: 3356987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117001257
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117001257
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chemokine-like factor
translation: METGITVLFLLLYLLRLHVRIRCLYWPLADVLNSVIAALFLFIVSLFAIIIKTNKGTLAGGVLGLILLVLCLVDVILLCKKISLEKARGRSAPAK
SIO_010081: LOC117001257
subclass of: SO_0000673
so part of: LOC117001257
location: complement(join(3356883..3356987,3358588..3358683,3359483..3359569))
location: region:3356883-3359569:-1
so has part: feature:3359483-3359569:-1:exon
so has part: feature:3358588-3358683:-1:exon
so has part: feature:3356883-3356987:-1:exon

XP_032925328.1
type: Protein
SIO_000068: ncbiprotein

position:3356883:-1
position: 3356883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3359569:-1
position: 3359569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3359483-3359569:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3358588-3358683:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3356883-3356987:-1:exon

TK2
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: TK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3359771..3371408
location: region:3359771-3371408:1
so has part: feature:3359771-3371408:1:exon
subclass of: SO_0000010

117001256
type: Gene
SIO_000068: ncbigene

position:3359771:1
position: 3359771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3371408:1
position: 3371408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3359771-3371408:1:exon

TK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: TK2
product: thymidine kinase 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069436.1
SIO_010081: TK2
subclass of: SO_0000673
so part of: TK2
location: join(3359771..3359876,3360924..3360961,3361707..3361781,3363021..3363074,3364817..3364906,3366254..3366327,3368840..3368928,3369227..3369306,3370537..3370617,3370966..3371408)
location: region:3359771-3371408:1
so has part: feature:3359771-3359876:1:exon
so has part: feature:3360924-3360961:1:exon
so has part: feature:3361707-3361781:1:exon
so has part: feature:3363021-3363074:1:exon
so has part: feature:3364817-3364906:1:exon
so has part: feature:3366254-3366327:1:exon
so has part: feature:3368840-3368928:1:exon
so has part: feature:3369227-3369306:1:exon
so has part: feature:3370537-3370617:1:exon
so has part: feature:3370966-3371408:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3359771-3359876:1:exon

position:3359876:1
position: 3359876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3360924-3360961:1:exon

position:3360924:1
position: 3360924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3360961:1
position: 3360961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3361707-3361781:1:exon

position:3361707:1
position: 3361707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3361781:1
position: 3361781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3363021-3363074:1:exon

position:3363021:1
position: 3363021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3363074:1
position: 3363074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3364817-3364906:1:exon

position:3364817:1
position: 3364817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3364906:1
position: 3364906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3366254-3366327:1:exon

position:3366254:1
position: 3366254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3366327:1
position: 3366327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3368840-3368928:1:exon

position:3368840:1
position: 3368840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3368928:1
position: 3368928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3369227-3369306:1:exon

position:3369227:1
position: 3369227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3369306:1
position: 3369306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3370537-3370617:1:exon

position:3370537:1
position: 3370537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3370617:1
position: 3370617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3370966-3371408:1:exon

position:3370966:1
position: 3370966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: TK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thymidine kinase 2, mitochondrial
translation: MAAGRPWRCAAGPGPRDGPGSRGDAGADDTDKHLIKKNAIKRIICIEGNIASGKTTCLDYFAQTTSIEVLKEPLSKWRNVRGHNILGLMYQDPSRWGITLQTYVQLTMLEQHTRPMISPIRMMERSIHSAKHVFVENLYRSGKMPEVDYAVLSEWFDWIQNNTDVSVDLIVYLQTSPKVCYERLKTRCREEEKVIPLEYLEAIHELYEEWLIKRALFEVSCPVLVIGADHDMQKMIEKYEENRDQILNPPNRQHHL
SIO_010081: TK2
subclass of: SO_0000673
so part of: TK2
location: join(3359786..3359876,3360924..3360961,3361707..3361781,3363021..3363074,3364817..3364906,3366254..3366327,3368840..3368928,3369227..3369306,3370537..3370617,3370966..3371064)
location: region:3359786-3371064:1
so has part: feature:3359786-3359876:1:exon
so has part: feature:3360924-3360961:1:exon
so has part: feature:3361707-3361781:1:exon
so has part: feature:3363021-3363074:1:exon
so has part: feature:3364817-3364906:1:exon
so has part: feature:3366254-3366327:1:exon
so has part: feature:3368840-3368928:1:exon
so has part: feature:3369227-3369306:1:exon
so has part: feature:3370537-3370617:1:exon
so has part: feature:3370966-3371064:1:exon

XP_032925327.1
type: Protein
SIO_000068: ncbiprotein

position:3359786:1
position: 3359786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3371064:1
position: 3371064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3359786-3359876:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3360924-3360961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3361707-3361781:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3363021-3363074:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3364817-3364906:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3366254-3366327:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3368840-3368928:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3369227-3369306:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3370537-3370617:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3370966-3371064:1:exon

LOC117001522
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117001522
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3374640..3380677)
location: region:3374640-3380677:-1
so has part: feature:3374640-3380677:-1:exon
subclass of: SO_0000010

117001522
type: Gene
SIO_000068: ncbigene

position:3374640:-1
position: 3374640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3380677:-1
position: 3380677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3374640-3380677:-1:exon

LOC117001522
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117001522
product: spermatogenesis-associated protein 2-like protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_033069937.1
SIO_010081: LOC117001522
subclass of: SO_0000673
so part of: LOC117001522
location: complement(join(3374640..3377251,3380393..3380677))
location: region:3374640-3380677:-1
so has part: feature:3380393-3380677:-1:exon
so has part: feature:3374640-3377251:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3380393-3380677:-1:exon

position:3380393:-1
position: 3380393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3374640-3377251:-1:exon

position:3377251:-1
position: 3377251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117001522
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117001522
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated protein 2-like protein
translation: MAEPALLREYVSQVAARAAQGQLSACADPALKARARRLLGAGRRGALDVRGVAEHCRRARGDRALRDLVRALELLELLCVNLLLCPWRREIRSLKTFTGNFVYYIQPVLPEDIVKAVLEKIGYVATTATEFSLVKKRNNEETKETAFAIFLARIECEAILEMTNEEKQGNLENSLQQGAQAHRGEEGEEDQTPQREDPERLGNEGNSETPLCLASQQKCSATCAASFEAAGNPRIKGDVAQSAAAASPGSLQEHQRQDINNTHLSGKCSDSEDFLITYSDIVIAQTPIFSETVSPTALEKEPGARLSEEHALAGAAEAAARVLGPVPLSPGASGPPAFAMFADSSCDSKTTLEFEAPGVPVESIEAEINDAINCMDPAPGDEPSELKSLPYKDFAQNCSIPREEDVCELSLTFTELQIRDAQEELTYPVEETGQPEAVAYAGTSDRHLREFHGSQIKHTYLTSAELHNRAVSHTEPPSALCCTAGHLEDSTTGSDSKRLLMDPAKAHPASECFRHIREPPNLTYIPPQSIDVQPSHGGRSSTLGRRGLVQPAGDSAGGREGKLENCNIQEPYVIIDKSDQAVLCHHT
SIO_010081: LOC117001522
subclass of: SO_0000673
so part of: LOC117001522
location: complement(join(3375773..3377251,3380393..3380677))
location: region:3375773-3380677:-1
so has part: feature:3380393-3380677:-1:exon
so has part: feature:3375773-3377251:-1:exon

XP_032925828.1
type: Protein
SIO_000068: ncbiprotein

position:3375773:-1
position: 3375773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3380393-3380677:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3375773-3377251:-1:exon

LOC117001579
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117001579
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3382251..3437113)
location: region:3382251-3437113:-1
so has part: feature:3382251-3437113:-1:exon
subclass of: SO_0000010

117001579
type: Gene
SIO_000068: ncbigene

position:3382251:-1
position: 3382251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3437113:-1
position: 3437113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3382251-3437113:-1:exon

LOC117001579
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117001579
product: protein BEAN1-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033070002.1
SIO_010081: LOC117001579
subclass of: SO_0000673
so part of: LOC117001579
location: complement(join(3382251..3386448,3398809..3398950,3401060..3401269,3435506..3435580,3437049..3437113))
location: region:3382251-3437113:-1
so has part: feature:3437049-3437113:-1:exon
so has part: feature:3435506-3435580:-1:exon
so has part: feature:3401060-3401269:-1:exon
so has part: feature:3398809-3398950:-1:exon
so has part: feature:3382251-3386448:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3437049-3437113:-1:exon

position:3437049:-1
position: 3437049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3435506-3435580:-1:exon

position:3435506:-1
position: 3435506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3435580:-1
position: 3435580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3401060-3401269:-1:exon

position:3401060:-1
position: 3401060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3401269:-1
position: 3401269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3398809-3398950:-1:exon

position:3398809:-1
position: 3398809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3398950:-1
position: 3398950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3382251-3386448:-1:exon

position:3386448:-1
position: 3386448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117001579
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117001579
product: protein BEAN1-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033070003.1
SIO_010081: LOC117001579
subclass of: SO_0000673
so part of: LOC117001579
location: complement(join(3382251..3386448,3398809..3398950,3401060..3401269,3425787..3425916,3435506..3435580,3437049..3437060))
location: region:3382251-3437060:-1
so has part: feature:3437049-3437060:-1:exon
so has part: feature:3435506-3435580:-1:exon
so has part: feature:3425787-3425916:-1:exon
so has part: feature:3401060-3401269:-1:exon
so has part: feature:3398809-3398950:-1:exon
so has part: feature:3382251-3386448:-1:exon

position:3437060:-1
position: 3437060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3437049-3437060:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3435506-3435580:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3425787-3425916:-1:exon

position:3425787:-1
position: 3425787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3425916:-1
position: 3425916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3401060-3401269:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3398809-3398950:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3382251-3386448:-1:exon

LOC117001579
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117001579
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein BEAN1-like isoform X1
translation: METAGTAAGWVIFFHLPLISGSSISTGIGSNYSNLPIFWNHSSASSAFPSAGEHGSDTNLLVSPLLVAGVVIGLVLFLSCTTIVVGSLRKDSRLGQPRLPREAADAPDGFSHGGSSAELRSTCTEEFPPACDFDSYLDILSQVNIMYPDPPPCYDECVGPGATQIYIPADDPPPYSLTDPCQRNEIPLNICISQEEEAAGTAGRAAHCAVRLQDWQQPSSGISVISQCGGCSPVRDSGV
SIO_010081: LOC117001579
subclass of: SO_0000673
so part of: LOC117001579
location: complement(join(3386187..3386448,3398809..3398950,3401060..3401269,3435506..3435580,3437049..3437079))
location: region:3386187-3437079:-1
so has part: feature:3437049-3437079:-1:exon
so has part: feature:3435506-3435580:-1:exon
so has part: feature:3401060-3401269:-1:exon
so has part: feature:3398809-3398950:-1:exon
so has part: feature:3386187-3386448:-1:exon

XP_032925893.1
type: Protein
SIO_000068: ncbiprotein

position:3386187:-1
position: 3386187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3437079:-1
position: 3437079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3437049-3437079:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3435506-3435580:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3401060-3401269:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3398809-3398950:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3386187-3386448:-1:exon

LOC117001579
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117001579
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein BEAN1-like isoform X2
translation: MSLELCSTIFWNHSSASSAFPSAGEHGSDTNLLVSPLLVAGVVIGLVLFLSCTTIVVGSLRKDSRLGQPRLPREAADAPDGFSHGGSSAELRSTCTEEFPPACDFDSYLDILSQVNIMYPDPPPCYDECVGPGATQIYIPADDPPPYSLTDPCQRNEIPLNICISQEEEAAGTAGRAAHCAVRLQDWQQPSSGISVISQCGGCSPVRDSGV
SIO_010081: LOC117001579
subclass of: SO_0000673
so part of: LOC117001579
location: complement(join(3386187..3386448,3398809..3398950,3401060..3401269,3425787..3425808))
location: region:3386187-3425808:-1
so has part: feature:3425787-3425808:-1:exon
so has part: feature:3401060-3401269:-1:exon
so has part: feature:3398809-3398950:-1:exon
so has part: feature:3386187-3386448:-1:exon

XP_032925894.1
type: Protein
SIO_000068: ncbiprotein

position:3425808:-1
position: 3425808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3425787-3425808:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3401060-3401269:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3398809-3398950:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3386187-3386448:-1:exon

LOC117001579
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117001579
product: protein BEAN1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033070004.2
SIO_010081: LOC117001579
subclass of: SO_0000673
so part of: LOC117001579
location: complement(join(3386356..3386448,3398841..3398950,3401060..3401269,3435506..3435580,3437049..3437113))
location: region:3386356-3437113:-1
so has part: feature:3437049-3437113:-1:exon
so has part: feature:3435506-3435580:-1:exon
so has part: feature:3401060-3401269:-1:exon
so has part: feature:3398841-3398950:-1:exon
so has part: feature:3386356-3386448:-1:exon

position:3386356:-1
position: 3386356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3437049-3437113:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3435506-3435580:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3401060-3401269:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3398841-3398950:-1:exon

position:3398841:-1
position: 3398841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3386356-3386448:-1:exon

LOC117001579
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: LOC117001579
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein BEAN1-like isoform X3
translation: METAGTAAGWVIFFHLPLISGSSISTGIGSNYSNLPIFWNHSSASSAFPSAGEHGSDTNLLVSPLLVAGVVIGLVLFLSCTTIVVGSLRKDSRLGQPRLPREAADAPDGFSHGGSSAELRSTCTEEFPPACDFDSYLDILSQLR
SIO_010081: LOC117001579
subclass of: SO_0000673
so part of: LOC117001579
location: complement(join(3386440..3386448,3398841..3398950,3401060..3401269,3435506..3435580,3437049..3437079))
location: region:3386440-3437079:-1
so has part: feature:3437049-3437079:-1:exon
so has part: feature:3435506-3435580:-1:exon
so has part: feature:3401060-3401269:-1:exon
so has part: feature:3398841-3398950:-1:exon
so has part: feature:3386440-3386448:-1:exon

XP_032925895.1
type: Protein
SIO_000068: ncbiprotein

position:3386440:-1
position: 3386440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3437049-3437079:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3435506-3435580:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3401060-3401269:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3398841-3398950:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3386440-3386448:-1:exon

LOC117001414
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117001414
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3444538..3451655)
location: region:3444538-3451655:-1
so has part: feature:3444538-3451655:-1:exon
subclass of: SO_0000011

117001414
type: Gene
SIO_000068: ncbigene

position:3444538:-1
position: 3444538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3451655:-1
position: 3451655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3444538-3451655:-1:exon

LOC117001414
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117001414
product: uncharacterized LOC117001414
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_004419048.1
SIO_010081: LOC117001414
subclass of: SO_0000673
so part of: LOC117001414
location: complement(join(3444538..3446658,3450526..3450691,3451429..3451655))
location: region:3444538-3451655:-1
so has part: feature:3451429-3451655:-1:exon
so has part: feature:3450526-3450691:-1:exon
so has part: feature:3444538-3446658:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3451429-3451655:-1:exon

position:3451429:-1
position: 3451429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3450526-3450691:-1:exon

position:3450526:-1
position: 3450526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3450691:-1
position: 3450691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3444538-3446658:-1:exon

position:3446658:-1
position: 3446658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDH5
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: CDH5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3454705..3483815)
location: region:3454705-3483815:-1
so has part: feature:3454705-3483815:-1:exon
subclass of: SO_0000010

117001486
type: Gene
SIO_000068: ncbigene

position:3454705:-1
position: 3454705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3483815:-1
position: 3483815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3454705-3483815:-1:exon

CDH5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CDH5
product: cadherin 5, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069886.2
SIO_010081: CDH5
subclass of: SO_0000673
so part of: CDH5
location: complement(join(3454705..3457325,3458134..3458379,3458667..3458775,3460257..3460381,3460935..3461077,3461653..3461912,3463625..3463812,3464200..3464364,3465063..3465179,3465267..3465555,3467781..3467926,3483622..3483815))
location: region:3454705-3483815:-1
so has part: feature:3483622-3483815:-1:exon
so has part: feature:3467781-3467926:-1:exon
so has part: feature:3465267-3465555:-1:exon
so has part: feature:3465063-3465179:-1:exon
so has part: feature:3464200-3464364:-1:exon
so has part: feature:3463625-3463812:-1:exon
so has part: feature:3461653-3461912:-1:exon
so has part: feature:3460935-3461077:-1:exon
so has part: feature:3460257-3460381:-1:exon
so has part: feature:3458667-3458775:-1:exon
so has part: feature:3458134-3458379:-1:exon
so has part: feature:3454705-3457325:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3483622-3483815:-1:exon

position:3483622:-1
position: 3483622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3467781-3467926:-1:exon

position:3467781:-1
position: 3467781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3467926:-1
position: 3467926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3465267-3465555:-1:exon

position:3465267:-1
position: 3465267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3465555:-1
position: 3465555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3465063-3465179:-1:exon

position:3465063:-1
position: 3465063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3465179:-1
position: 3465179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3464200-3464364:-1:exon

position:3464200:-1
position: 3464200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3464364:-1
position: 3464364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3463625-3463812:-1:exon

position:3463625:-1
position: 3463625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3463812:-1
position: 3463812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3461653-3461912:-1:exon

position:3461653:-1
position: 3461653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3461912:-1
position: 3461912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3460935-3461077:-1:exon

position:3460935:-1
position: 3460935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3461077:-1
position: 3461077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3460257-3460381:-1:exon

position:3460257:-1
position: 3460257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3460381:-1
position: 3460381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3458667-3458775:-1:exon

position:3458667:-1
position: 3458667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3458775:-1
position: 3458775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3458134-3458379:-1:exon

position:3458134:-1
position: 3458134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3458379:-1
position: 3458379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3454705-3457325:-1:exon

position:3457325:-1
position: 3457325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDH5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CDH5
product: cadherin 5, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069882.2
SIO_010081: CDH5
subclass of: SO_0000673
so part of: CDH5
location: complement(join(3454705..3457325,3458134..3458379,3458667..3458775,3460257..3460381,3460935..3461077,3461653..3461912,3463625..3463812,3464200..3464364,3465063..3465179,3465267..3465555,3467781..3467982,3483622..3483815))
location: region:3454705-3483815:-1
so has part: feature:3483622-3483815:-1:exon
so has part: feature:3467781-3467982:-1:exon
so has part: feature:3465267-3465555:-1:exon
so has part: feature:3465063-3465179:-1:exon
so has part: feature:3464200-3464364:-1:exon
so has part: feature:3463625-3463812:-1:exon
so has part: feature:3461653-3461912:-1:exon
so has part: feature:3460935-3461077:-1:exon
so has part: feature:3460257-3460381:-1:exon
so has part: feature:3458667-3458775:-1:exon
so has part: feature:3458134-3458379:-1:exon
so has part: feature:3454705-3457325:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3483622-3483815:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3467781-3467982:-1:exon

position:3467982:-1
position: 3467982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3465267-3465555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3465063-3465179:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3464200-3464364:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3463625-3463812:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3461653-3461912:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3460935-3461077:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3460257-3460381:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3458667-3458775:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3458134-3458379:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3454705-3457325:-1:exon

CDH5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CDH5
product: cadherin 5, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069885.2
SIO_010081: CDH5
subclass of: SO_0000673
so part of: CDH5
location: complement(join(3454705..3457325,3458134..3458379,3458667..3458775,3460257..3460381,3460935..3461077,3461653..3461912,3463625..3463812,3464200..3464364,3465063..3465179,3465267..3465555,3467781..3467926,3480095..3480154,3483622..3483815))
location: region:3454705-3483815:-1
so has part: feature:3483622-3483815:-1:exon
so has part: feature:3480095-3480154:-1:exon
so has part: feature:3467781-3467926:-1:exon
so has part: feature:3465267-3465555:-1:exon
so has part: feature:3465063-3465179:-1:exon
so has part: feature:3464200-3464364:-1:exon
so has part: feature:3463625-3463812:-1:exon
so has part: feature:3461653-3461912:-1:exon
so has part: feature:3460935-3461077:-1:exon
so has part: feature:3460257-3460381:-1:exon
so has part: feature:3458667-3458775:-1:exon
so has part: feature:3458134-3458379:-1:exon
so has part: feature:3454705-3457325:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3483622-3483815:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3480095-3480154:-1:exon

position:3480095:-1
position: 3480095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3480154:-1
position: 3480154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3467781-3467926:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3465267-3465555:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3465063-3465179:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3464200-3464364:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3463625-3463812:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3461653-3461912:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3460935-3461077:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3460257-3460381:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3458667-3458775:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3458134-3458379:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3454705-3457325:-1:exon

CDH5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CDH5
product: cadherin 5, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069884.2
SIO_010081: CDH5
subclass of: SO_0000673
so part of: CDH5
location: complement(join(3454705..3457325,3458134..3458379,3458667..3458775,3460257..3460381,3460935..3461077,3461653..3461912,3463625..3463812,3464200..3464364,3465063..3465179,3465267..3465555,3467781..3467982,3480095..3480154,3483622..3483815))
location: region:3454705-3483815:-1
so has part: feature:3483622-3483815:-1:exon
so has part: feature:3480095-3480154:-1:exon
so has part: feature:3467781-3467982:-1:exon
so has part: feature:3465267-3465555:-1:exon
so has part: feature:3465063-3465179:-1:exon
so has part: feature:3464200-3464364:-1:exon
so has part: feature:3463625-3463812:-1:exon
so has part: feature:3461653-3461912:-1:exon
so has part: feature:3460935-3461077:-1:exon
so has part: feature:3460257-3460381:-1:exon
so has part: feature:3458667-3458775:-1:exon
so has part: feature:3458134-3458379:-1:exon
so has part: feature:3454705-3457325:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3483622-3483815:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3480095-3480154:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3467781-3467982:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3465267-3465555:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3465063-3465179:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3464200-3464364:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3463625-3463812:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3461653-3461912:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3460935-3461077:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3460257-3460381:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3458667-3458775:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3458134-3458379:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3454705-3457325:-1:exon

CDH5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CDH5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-5 isoform X2
translation: MQSFAELLAFADGGTQKSNQNLCSNDVSHKRQKRDWIWNQMHIKEEIDTPLPHHVGKITSSVRNNNAKYIIKGEYANTIFKVEETSGDVYAFERLDREKKAEYELTALIIDRTNNKSLEQPSKFIIKVYDINDNAPVFVQKVFNGSVPEMSPVGTSVTKVTAVDADDPTVSGHATVTYEVTTGSEYFTIDDSGVIYTKDPNLDRETKSTYEIVVQAKDAPGFSGDSSTATVIITLSDINDNAPEFKESSFHFKVPENISVGGEVGRVKVEDIDEPQHRNTRYSFIQGEFRDTFDIVANPYTNEGIFRPKKPLDFETVSKYTFSIEATDPTVNLRYFKPGNRNSNSIARVTIEVTDVDEPPVFSRLPYEFKVRENHAEVKTLGSVYAKDPDAAKRKIRYIQRRASPSGDYVRVSNSGVIQLPKPLDREFSSSYNITVAAVEILEDGRLSDRESHAHVHVIVDDVNDNAPELVSPEEPRVCENAAPGKVIVRISAVDKDETSPRGFFRYSLATEDSNFSLIENYDNTANITVKYGQFNRELTKFHYLPVLISDNGDPDLTSTNTLVISVCKCNEKGDFTFCEERAKQVGVSIQALVAIFICIFTIIVIVLLILLRKRNKKDLSGLGRSVAEIHEQLVTYDEEGGGEMDTTSYDVSVLNSVRKNGLKAEAAPSPYAQVQKPAGNITPGAGGMEMMIEVKKDEADNDRDLLPYDTLHIYGYEGAESIAESLSSLGSGSSDSDIDYDFLNDWGPRFKMLAELYGSEPSEDFVY
SIO_010081: CDH5
subclass of: SO_0000673
so part of: CDH5
location: complement(join(3456832..3457325,3458134..3458379,3458667..3458775,3460257..3460381,3460935..3461077,3461653..3461912,3463625..3463812,3464200..3464364,3465063..3465179,3465267..3465555,3467781..3467926,3480095..3480119))
location: region:3456832-3480119:-1
so has part: feature:3480095-3480119:-1:exon
so has part: feature:3467781-3467926:-1:exon
so has part: feature:3465267-3465555:-1:exon
so has part: feature:3465063-3465179:-1:exon
so has part: feature:3464200-3464364:-1:exon
so has part: feature:3463625-3463812:-1:exon
so has part: feature:3461653-3461912:-1:exon
so has part: feature:3460935-3461077:-1:exon
so has part: feature:3460257-3460381:-1:exon
so has part: feature:3458667-3458775:-1:exon
so has part: feature:3458134-3458379:-1:exon
so has part: feature:3456832-3457325:-1:exon

XP_032925776.1
type: Protein
SIO_000068: ncbiprotein

position:3456832:-1
position: 3456832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3480119:-1
position: 3480119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3480095-3480119:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3467781-3467926:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3465267-3465555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3465063-3465179:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3464200-3464364:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3463625-3463812:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3461653-3461912:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3460935-3461077:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3460257-3460381:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3458667-3458775:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3458134-3458379:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3456832-3457325:-1:exon

CDH5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CDH5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-5 isoform X1
translation: MSHLILLFSLFLAPAFADGGTQKSNQNLCSNDVSHKRQKRDWIWNQMHIKEEIDTPLPHHVGKITSSVRNNNAKYIIKGEYANTIFKVEETSGDVYAFERLDREKKAEYELTALIIDRTNNKSLEQPSKFIIKVYDINDNAPVFVQKVFNGSVPEMSPVGTSVTKVTAVDADDPTVSGHATVTYEVTTGSEYFTIDDSGVIYTKDPNLDRETKSTYEIVVQAKDAPGFSGDSSTATVIITLSDINDNAPEFKESSFHFKVPENISVGGEVGRVKVEDIDEPQHRNTRYSFIQGEFRDTFDIVANPYTNEGIFRPKKPLDFETVSKYTFSIEATDPTVNLRYFKPGNRNSNSIARVTIEVTDVDEPPVFSRLPYEFKVRENHAEVKTLGSVYAKDPDAAKRKIRYIQRRASPSGDYVRVSNSGVIQLPKPLDREFSSSYNITVAAVEILEDGRLSDRESHAHVHVIVDDVNDNAPELVSPEEPRVCENAAPGKVIVRISAVDKDETSPRGFFRYSLATEDSNFSLIENYDNTANITVKYGQFNRELTKFHYLPVLISDNGDPDLTSTNTLVISVCKCNEKGDFTFCEERAKQVGVSIQALVAIFICIFTIIVIVLLILLRKRNKKDLSGLGRSVAEIHEQLVTYDEEGGGEMDTTSYDVSVLNSVRKNGLKAEAAPSPYAQVQKPAGNITPGAGGMEMMIEVKKDEADNDRDLLPYDTLHIYGYEGAESIAESLSSLGSGSSDSDIDYDFLNDWGPRFKMLAELYGSEPSEDFVY
SIO_010081: CDH5
subclass of: SO_0000673
so part of: CDH5
location: complement(join(3456832..3457325,3458134..3458379,3458667..3458775,3460257..3460381,3460935..3461077,3461653..3461912,3463625..3463812,3464200..3464364,3465063..3465179,3465267..3465555,3467781..3467969))
location: region:3456832-3467969:-1
so has part: feature:3467781-3467969:-1:exon
so has part: feature:3465267-3465555:-1:exon
so has part: feature:3465063-3465179:-1:exon
so has part: feature:3464200-3464364:-1:exon
so has part: feature:3463625-3463812:-1:exon
so has part: feature:3461653-3461912:-1:exon
so has part: feature:3460935-3461077:-1:exon
so has part: feature:3460257-3460381:-1:exon
so has part: feature:3458667-3458775:-1:exon
so has part: feature:3458134-3458379:-1:exon
so has part: feature:3456832-3457325:-1:exon

XP_032925773.1
type: Protein
SIO_000068: ncbiprotein

position:3467969:-1
position: 3467969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3467781-3467969:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3465267-3465555:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3465063-3465179:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3464200-3464364:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3463625-3463812:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3461653-3461912:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3460935-3461077:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3460257-3460381:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3458667-3458775:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3458134-3458379:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3456832-3457325:-1:exon

CDH5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CDH5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-5 isoform X1
translation: MSHLILLFSLFLAPAFADGGTQKSNQNLCSNDVSHKRQKRDWIWNQMHIKEEIDTPLPHHVGKITSSVRNNNAKYIIKGEYANTIFKVEETSGDVYAFERLDREKKAEYELTALIIDRTNNKSLEQPSKFIIKVYDINDNAPVFVQKVFNGSVPEMSPVGTSVTKVTAVDADDPTVSGHATVTYEVTTGSEYFTIDDSGVIYTKDPNLDRETKSTYEIVVQAKDAPGFSGDSSTATVIITLSDINDNAPEFKESSFHFKVPENISVGGEVGRVKVEDIDEPQHRNTRYSFIQGEFRDTFDIVANPYTNEGIFRPKKPLDFETVSKYTFSIEATDPTVNLRYFKPGNRNSNSIARVTIEVTDVDEPPVFSRLPYEFKVRENHAEVKTLGSVYAKDPDAAKRKIRYIQRRASPSGDYVRVSNSGVIQLPKPLDREFSSSYNITVAAVEILEDGRLSDRESHAHVHVIVDDVNDNAPELVSPEEPRVCENAAPGKVIVRISAVDKDETSPRGFFRYSLATEDSNFSLIENYDNTANITVKYGQFNRELTKFHYLPVLISDNGDPDLTSTNTLVISVCKCNEKGDFTFCEERAKQVGVSIQALVAIFICIFTIIVIVLLILLRKRNKKDLSGLGRSVAEIHEQLVTYDEEGGGEMDTTSYDVSVLNSVRKNGLKAEAAPSPYAQVQKPAGNITPGAGGMEMMIEVKKDEADNDRDLLPYDTLHIYGYEGAESIAESLSSLGSGSSDSDIDYDFLNDWGPRFKMLAELYGSEPSEDFVY
SIO_010081: CDH5
subclass of: SO_0000673
so part of: CDH5
location: complement(join(3456832..3457325,3458134..3458379,3458667..3458775,3460257..3460381,3460935..3461077,3461653..3461912,3463625..3463812,3464200..3464364,3465063..3465179,3465267..3465555,3467781..3467969))
location: region:3456832-3467969:-1
so has part: feature:3467781-3467969:-1:exon
so has part: feature:3465267-3465555:-1:exon
so has part: feature:3465063-3465179:-1:exon
so has part: feature:3464200-3464364:-1:exon
so has part: feature:3463625-3463812:-1:exon
so has part: feature:3461653-3461912:-1:exon
so has part: feature:3460935-3461077:-1:exon
so has part: feature:3460257-3460381:-1:exon
so has part: feature:3458667-3458775:-1:exon
so has part: feature:3458134-3458379:-1:exon
so has part: feature:3456832-3457325:-1:exon

XP_032925775.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3467781-3467969:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3465267-3465555:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3465063-3465179:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3464200-3464364:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3463625-3463812:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3461653-3461912:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3460935-3461077:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3460257-3460381:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3458667-3458775:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3458134-3458379:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3456832-3457325:-1:exon

CDH5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CDH5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-5 isoform X3
translation: MHIKEEIDTPLPHHVGKITSSVRNNNAKYIIKGEYANTIFKVEETSGDVYAFERLDREKKAEYELTALIIDRTNNKSLEQPSKFIIKVYDINDNAPVFVQKVFNGSVPEMSPVGTSVTKVTAVDADDPTVSGHATVTYEVTTGSEYFTIDDSGVIYTKDPNLDRETKSTYEIVVQAKDAPGFSGDSSTATVIITLSDINDNAPEFKESSFHFKVPENISVGGEVGRVKVEDIDEPQHRNTRYSFIQGEFRDTFDIVANPYTNEGIFRPKKPLDFETVSKYTFSIEATDPTVNLRYFKPGNRNSNSIARVTIEVTDVDEPPVFSRLPYEFKVRENHAEVKTLGSVYAKDPDAAKRKIRYIQRRASPSGDYVRVSNSGVIQLPKPLDREFSSSYNITVAAVEILEDGRLSDRESHAHVHVIVDDVNDNAPELVSPEEPRVCENAAPGKVIVRISAVDKDETSPRGFFRYSLATEDSNFSLIENYDNTANITVKYGQFNRELTKFHYLPVLISDNGDPDLTSTNTLVISVCKCNEKGDFTFCEERAKQVGVSIQALVAIFICIFTIIVIVLLILLRKRNKKDLSGLGRSVAEIHEQLVTYDEEGGGEMDTTSYDVSVLNSVRKNGLKAEAAPSPYAQVQKPAGNITPGAGGMEMMIEVKKDEADNDRDLLPYDTLHIYGYEGAESIAESLSSLGSGSSDSDIDYDFLNDWGPRFKMLAELYGSEPSEDFVY
SIO_010081: CDH5
subclass of: SO_0000673
so part of: CDH5
location: complement(join(3456832..3457325,3458134..3458379,3458667..3458775,3460257..3460381,3460935..3461077,3461653..3461912,3463625..3463812,3464200..3464364,3465063..3465179,3465267..3465555,3467781..3467831))
location: region:3456832-3467831:-1
so has part: feature:3467781-3467831:-1:exon
so has part: feature:3465267-3465555:-1:exon
so has part: feature:3465063-3465179:-1:exon
so has part: feature:3464200-3464364:-1:exon
so has part: feature:3463625-3463812:-1:exon
so has part: feature:3461653-3461912:-1:exon
so has part: feature:3460935-3461077:-1:exon
so has part: feature:3460257-3460381:-1:exon
so has part: feature:3458667-3458775:-1:exon
so has part: feature:3458134-3458379:-1:exon
so has part: feature:3456832-3457325:-1:exon

XP_032925777.1
type: Protein
SIO_000068: ncbiprotein

position:3467831:-1
position: 3467831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3467781-3467831:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3465267-3465555:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3465063-3465179:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3464200-3464364:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3463625-3463812:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3461653-3461912:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3460935-3461077:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3460257-3460381:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3458667-3458775:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3458134-3458379:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3456832-3457325:-1:exon

LOC117001487
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117001487
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3606804..3638665
location: region:3606804-3638665:1
so has part: feature:3606804-3638665:1:exon
subclass of: SO_0000011

117001487
type: Gene
SIO_000068: ncbigene

position:3606804:1
position: 3606804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3638665:1
position: 3638665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3606804-3638665:1:exon

LOC117001487
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117001487
product: uncharacterized LOC117001487
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004419060.1
SIO_010081: LOC117001487
subclass of: SO_0000673
so part of: LOC117001487
location: join(3606804..3606939,3634548..3634629,3638372..3638665)
location: region:3606804-3638665:1
so has part: feature:3606804-3606939:1:exon
so has part: feature:3634548-3634629:1:exon
so has part: feature:3638372-3638665:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3606804-3606939:1:exon

position:3606939:1
position: 3606939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3634548-3634629:1:exon

position:3634548:1
position: 3634548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3634629:1
position: 3634629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3638372-3638665:1:exon

position:3638372:1
position: 3638372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117001231
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117001231
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3738834..3748791
location: region:3738834-3748791:1
so has part: feature:3738834-3748791:1:exon
subclass of: SO_0000011

117001231
type: Gene
SIO_000068: ncbigene

position:3738834:1
position: 3738834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3748791:1
position: 3748791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3738834-3748791:1:exon

LOC117001231
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117001231
product: uncharacterized LOC117001231
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004418990.1
SIO_010081: LOC117001231
subclass of: SO_0000673
so part of: LOC117001231
location: join(3738834..3738935,3746137..3746209,3748706..3748791)
location: region:3738834-3748791:1
so has part: feature:3738834-3738935:1:exon
so has part: feature:3746137-3746209:1:exon
so has part: feature:3748706-3748791:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3738834-3738935:1:exon

position:3738935:1
position: 3738935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3746137-3746209:1:exon

position:3746137:1
position: 3746137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3746209:1
position: 3746209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3748706-3748791:1:exon

position:3748706:1
position: 3748706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CDH11
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: CDH11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4159368..4240388
location: region:4159368-4240388:1
so has part: feature:4159368-4240388:1:exon
subclass of: SO_0000010

117001302
type: Gene
SIO_000068: ncbigene

position:4159368:1
position: 4159368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4240388:1
position: 4240388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4159368-4240388:1:exon

CDH11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: CDH11
product: cadherin 11
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons
transcript id: XM_033069519.1
SIO_010081: CDH11
subclass of: SO_0000673
so part of: CDH11
location: join(4159368..4159510,4159816..4159958,4199125..4199246,4220202..4220597,4222214..4222508,4223265..4223384,4223784..4223951,4226097..4226284,4227750..4228003,4229197..4229333,4229530..4229651,4230810..4230927,4236785..4237043,4239052..4240388)
location: region:4159368-4240388:1
so has part: feature:4159368-4159510:1:exon
so has part: feature:4159816-4159958:1:exon
so has part: feature:4199125-4199246:1:exon
so has part: feature:4220202-4220597:1:exon
so has part: feature:4222214-4222508:1:exon
so has part: feature:4223265-4223384:1:exon
so has part: feature:4223784-4223951:1:exon
so has part: feature:4226097-4226284:1:exon
so has part: feature:4227750-4228003:1:exon
so has part: feature:4229197-4229333:1:exon
so has part: feature:4229530-4229651:1:exon
so has part: feature:4230810-4230927:1:exon
so has part: feature:4236785-4237043:1:exon
so has part: feature:4239052-4240388:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4159368-4159510:1:exon

position:4159510:1
position: 4159510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4159816-4159958:1:exon

position:4159816:1
position: 4159816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4159958:1
position: 4159958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4199125-4199246:1:exon

position:4199125:1
position: 4199125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4199246:1
position: 4199246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4220202-4220597:1:exon

position:4220202:1
position: 4220202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4220597:1
position: 4220597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4222214-4222508:1:exon

position:4222214:1
position: 4222214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4222508:1
position: 4222508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4223265-4223384:1:exon

position:4223265:1
position: 4223265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4223384:1
position: 4223384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4223784-4223951:1:exon

position:4223784:1
position: 4223784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4223951:1
position: 4223951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4226097-4226284:1:exon

position:4226097:1
position: 4226097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4226284:1
position: 4226284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4227750-4228003:1:exon

position:4227750:1
position: 4227750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4228003:1
position: 4228003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4229197-4229333:1:exon

position:4229197:1
position: 4229197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4229333:1
position: 4229333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4229530-4229651:1:exon

position:4229530:1
position: 4229530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4229651:1
position: 4229651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4230810-4230927:1:exon

position:4230810:1
position: 4230810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4230927:1
position: 4230927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4236785-4237043:1:exon

position:4236785:1
position: 4236785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4237043:1
position: 4237043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4239052-4240388:1:exon

position:4239052:1
position: 4239052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CDH11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 91951
gene: CDH11
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: cadherin-11
translation: MKEHHCLHAALLCLGVLCYSQALATERLSPARPSLHGHLEKGKEGQVLHRSKRGWVWNQFFVIEEYTGPDPVLVGRLHSDIDSGDGNIKYILSGEGAGIIFVIDDKSGNIHATKTLDREERAQYTLTAQAVDRNTNRPLEPPSEFIVKVQDINDNPPEFLHENYHANVPERSNVGTSVIQVTASDADDPTYGNSAKLVYSILEGQPYFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKDMGGHMGGLSGTTKVTITLTDVNDNPPKFPQSVYQMSVSEAAVPGEEVGRVKAKDPDIGENGLVAYSIIDGDGMDMFEITTDYETQEGVVKLKKTLDYETKKSYSLKVEAANVHIDPKFISNGPFKDTVTVKIAVEDADEPPVFLKPSYIFEVQENAASGTVVGKVHAKDPDAANSAIRYSIDRHTDLERYFVINAEDGNIKTIKTLDREEMAWHNISVFAVEVHKQHQEAKVPVAIKVVDVNDNAPKFAAAYEAFVCENARSNQQFITISADDKDDSANGPRFIFSLPPEIIHNPNLQLRDNRDNTASVLVRRDRVQAARSRTVPPSHREISDGGVPPLSSTNTLSIRVCGCDGSGSLLSCNAEAYVLNAGLSTGALIAILACIVIPLSLTHVLFPSVIVVLFVTLKRQKKEPLIVFEEEDVRENIITYDDEGGGEEDTEAFDIATLQNPDGINGFMPRKDIKPEYQYLPRPGLRPAPNSVDVDDFINTRIQEADNDPTAPPYDSIQIYGYEGRGSVAGSLSSLESATTDSDLDYDYLQNWGPRFKKLADLYGSKDTFDDDS
SIO_010081: CDH11
subclass of: SO_0000673
so part of: CDH11
location: join(4220370..4220597,4222214..4222508,4223265..4223384,4223784..4223951,4226097..4226284,4227750..4228003,4229197..4229333,4229530..4229651,4230810..4230927,4236785..4237043,4239052..4239574)
location: region:4220370-4239574:1
so has part: feature:4220370-4220597:1:exon
so has part: feature:4222214-4222508:1:exon
so has part: feature:4223265-4223384:1:exon
so has part: feature:4223784-4223951:1:exon
so has part: feature:4226097-4226284:1:exon
so has part: feature:4227750-4228003:1:exon
so has part: feature:4229197-4229333:1:exon
so has part: feature:4229530-4229651:1:exon
so has part: feature:4230810-4230927:1:exon
so has part: feature:4236785-4237043:1:exon
so has part: feature:4239052-4239574:1:exon

XP_032925410.1
type: Protein
SIO_000068: ncbiprotein

position:4220370:1
position: 4220370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4239574:1
position: 4239574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4220370-4220597:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4222214-4222508:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4223265-4223384:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4223784-4223951:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4226097-4226284:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4227750-4228003:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4229197-4229333:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4229530-4229651:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4230810-4230927:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4236785-4237043:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4239052-4239574:1:exon

LOC117001443
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117001443
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4281234..4294403
location: region:4281234-4294403:1
so has part: feature:4281234-4294403:1:exon
subclass of: SO_0000011

117001443
type: Gene
SIO_000068: ncbigene

position:4281234:1
position: 4281234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4294403:1
position: 4294403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4281234-4294403:1:exon

LOC117001443
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117001443
product: uncharacterized LOC117001443
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004419055.1
SIO_010081: LOC117001443
subclass of: SO_0000673
so part of: LOC117001443
location: join(4281234..4281387,4283828..4283940,4291974..4292061,4293371..4294403)
location: region:4281234-4294403:1
so has part: feature:4281234-4281387:1:exon
so has part: feature:4283828-4283940:1:exon
so has part: feature:4291974-4292061:1:exon
so has part: feature:4293371-4294403:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4281234-4281387:1:exon

position:4281387:1
position: 4281387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4283828-4283940:1:exon

position:4283828:1
position: 4283828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4283940:1
position: 4283940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4291974-4292061:1:exon

position:4291974:1
position: 4291974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4292061:1
position: 4292061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4293371-4294403:1:exon

position:4293371:1
position: 4293371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117001219
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117001219
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4384250..4391741)
location: region:4384250-4391741:-1
so has part: feature:4384250-4391741:-1:exon
subclass of: SO_0000011

117001219
type: Gene
SIO_000068: ncbigene

position:4384250:-1
position: 4384250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4391741:-1
position: 4391741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4384250-4391741:-1:exon

LOC117001219
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 91951
nc RNA class: lncRNA
gene: LOC117001219
product: uncharacterized LOC117001219
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XR_004418984.2
SIO_010081: LOC117001219
subclass of: SO_0000673
so part of: LOC117001219
location: complement(join(4384250..4384640,4391360..4391402,4391616..4391741))
location: region:4384250-4391741:-1
so has part: feature:4391616-4391741:-1:exon
so has part: feature:4391360-4391402:-1:exon
so has part: feature:4384250-4384640:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4391616-4391741:-1:exon

position:4391616:-1
position: 4391616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4391360-4391402:-1:exon

position:4391360:-1
position: 4391360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4391402:-1
position: 4391402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4384250-4384640:-1:exon

position:4384640:-1
position: 4384640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117001523
type: Gene
subclass of: SO_0000704
RO_0002162: 91951
gene: LOC117001523
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4726597..4805890
location: region:4726597-4805890:1
so has part: feature:4726597-4805890:1:exon
subclass of: SO_0000010

117001523
type: Gene
SIO_000068: ncbigene

position:4726597:1
position: 4726597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4805890:1
position: 4805890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4726597-4805890:1:exon

LOC117001523
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 91951
gene: LOC117001523
product: hydrocephalus-inducing protein-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_033069938.1
SIO_010081: LOC117001523
subclass of: SO_0000673
so part of: LOC117001523
location: join(4726597..4726764,4736744..4736860,4737936..4738055,4739935..4740057,4742203..4742337,4743729..4743928,4746423..4746547,4747819..4748023,4750538..4750727,4751812..4751911,4752760..4752878,4754056..4754279,4755655..4755722,4757896..4758128,4758915..4759015,4759865..4760000,4760448..4760768,4761488..4761640,4763415..4763653,4764727..4764967,4765225..4765365,4766690..4766830,4767291..4767607,4769157..4769319,4769802..4769897,4770601..4770810,4771655..4771783,4774068..4774245,4774774..4774958,4775684..4775817,4776774..4776910,4777985..4778106,4778194..4778385,4778782..4778934,4780002..4780241,4780494..4780698,4781158..4781325,4781625..4781789,4783384..4783700,4784144..4784272,4784572..4784776,4785828..4785969,4787201..4788389,4788869..4789027,4789462..4789649,4789824..4790006,4790242..4790361,4791572..4791731,4791837..4792009,4792138..4792336,4793002..4793101,4794078..4794177,4794669..4794837,4795126..4795352,4795665..4795722,4796339..4796543,4796917..4797149,4797729..4797880,4798812..4799004,4799559..4799667,4800261..4800515,4800846..4800988,4801328..4801549,4802718..4802878,4803377..4803477,4804055..4804826,4805604..4805890)
location: region:4726597-4805890:1
so has part: feature:4726597-4726764:1:exon
so has part: feature:4736744-4736860:1:exon
so has part: feature:4737936-4738055:1:exon
so has part: feature:4739935-4740057:1:exon
so has part: feature:4742203-4742337:1:exon
so has part: feature:4743729-4743928:1:exon
so has part: feature:4746423-4746547:1:exon
so has part: feature:4747819-4748023:1:exon
so has part: feature:4750538-4750727:1:exon
so has part: feature:4751812-4751911:1:exon
so has part: feature:4752760-4752878:1:exon
so has part: feature:4754056-4754279:1:exon
so has part: feature:4755655-4755722:1:exon
so has part: feature:4757896-4758128:1:exon
so has part: feature:4758915-4759015:1:exon
so has part: feature:4759865-4760000:1:exon
so has part: feature:4760448-4760768:1:exon
so has part: feature:4761488-4761640:1:exon
so has part: feature:4763415-4763653:1:exon
so has part: feature:4764727-4764967:1:exon
so has part: feature:4765225-4765365:1:exon
so has part: feature:4766690-4766830:1:exon
so has part: feature:4767291-4767607:1:exon
so has part: feature:4769157-4769319:1:exon
so has part: feature:4769802-4769897:1:exon
so has part: feature:4770601-4770810:1:exon
so has part: feature:4771655-4771783:1:exon
so has part: feature:4774068-4774245:1:exon
so has part: feature:4774774-4774958:1:exon
so has part: feature:4775684-4775817:1:exon
so has part: feature:4776774-4776910:1:exon
so has part: feature:4777985-4778106:1:exon
so has part: feature:4778194-4778385:1:exon
so has part: feature:4778782-4778934:1:exon
so has part: feature:4780002-4780241:1:exon
so has part: feature:4780494-4780698:1:exon
so has part: feature:4781158-4781325:1:exon
so has part: feature:4781625-4781789:1:exon
so has part: feature:4783384-4783700:1:exon
so has part: feature:4784144-4784272:1:exon
so has part: feature:4784572-4784776:1:exon
so has part: feature:4785828-4785969:1:exon
so has part: feature:4787201-4788389:1:exon
so has part: feature:4788869-4789027:1:exon
so has part: feature:4789462-4789649:1:exon
so has part: feature:4789824-4790006:1:exon
so has part: feature:4790242-4790361:1:exon
so has part: feature:4791572-4791731:1:exon
so has part: feature:4791837-4792009:1:exon
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