Catharus ustulatus isolate bCatUst1 chromosome 11, bCatUst1.pri.v2, whole genome shotgun sequence.
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Turdidae; Catharus.
REFSEQ INFORMATION: The reference sequence is identical to\nCM020346.1.\nAssembly name: bCatUst1.pri.v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/12/22. The original whole-genome shotgun project has the\naccession WNMQ00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 06-AUG-2020\nAssembly Method :: FALCON v. DX 1.9.0; FALCON-Unzip v.\n 6.0.0.47841; purge_dups github v.\n purge_haplotig (bitbucket v1.0.3+\n 1.Nov.2018); Scaff10x v. 2; Bionano Solve\n v. 3.2.1_04122018; Salsa2 HiC v. 2.2;\n Arrow polishing and gap filling v.\n Smrtlink_6.0.0.47841; Longranger Align v.\n 2.2.2; freebayes v. 1.3.1; gEVAL manual\n curation v. 2020-08-06; VGP assembly\n pipeline v. 1.5\nAssembly Name :: bCatUst1.pri.v2\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 60.58x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Catharus ustulatus Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
hypoxanthine-guanine phosphoribosyltransferase-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
ADAM metallopeptidase with thrombospondin type 1 motif 18, transcript variant X1
COORDINATES: polyA evidence [ECO:0006239]
ADAM metallopeptidase with thrombospondin type 1 motif 18, transcript variant X2
A disintegrin and metalloproteinase with thrombospondin motifs 18 isoform X1
A disintegrin and metalloproteinase with thrombospondin motifs 18 isoform X2
ADAM metallopeptidase with thrombospondin type 1 motif 18, transcript variant X3
A disintegrin and metalloproteinase with thrombospondin motifs 18 isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 9 Proteins, and 55% coverage of the annotated genomic feature by RNAseq alignments
Fanconi anemia core complex-associated protein 24
rhophilin Rho GTPase binding protein 2, transcript variant X2
rhophilin Rho GTPase binding protein 2, transcript variant X1
G-patch domain containing 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
G-patch domain containing 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
G-patch domain containing 1, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
G patch domain-containing protein 1 isoform X1
G patch domain-containing protein 1 isoform X2
G patch domain-containing protein 1 isoform X3
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA threonine (anticodon AGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
low-density lipoprotein receptor-related protein 3
solute carrier family 7 member 10, transcript variant X3
solute carrier family 7 member 10, transcript variant X2
solute carrier family 7 member 10, transcript variant X1
solute carrier family 7 member 10, transcript variant X4
asc-type amino acid transporter 1 isoform X2
asc-type amino acid transporter 1 isoform X3
asc-type amino acid transporter 1 isoform X1
asc-type amino acid transporter 1 isoform X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
CCAAT enhancer binding protein gamma, transcript variant X4
CCAAT enhancer binding protein gamma, transcript variant X2
CCAAT enhancer binding protein gamma, transcript variant X1
CCAAT enhancer binding protein gamma, transcript variant X3
potassium channel tetramerization domain containing 15, transcript variant X2
potassium channel tetramerization domain containing 15, transcript variant X4
potassium channel tetramerization domain containing 15, transcript variant X3
BTB/POZ domain-containing protein KCTD15 isoform X3
BTB/POZ domain-containing protein KCTD15 isoform X2
potassium channel tetramerization domain containing 15, transcript variant X6
potassium channel tetramerization domain containing 15, transcript variant X5
potassium channel tetramerization domain containing 15, transcript variant X1
BTB/POZ domain-containing protein KCTD15 isoform X1
BTB/POZ domain-containing protein KCTD15 isoform X4
BTB/POZ domain-containing protein KCTD15 isoform X5
potassium channel tetramerization domain containing 15, transcript variant X9
potassium channel tetramerization domain containing 15, transcript variant X8
BTB/POZ domain-containing protein KCTD15 isoform X7
potassium channel tetramerization domain containing 15, transcript variant X10
potassium channel tetramerization domain containing 15, transcript variant X7
BTB/POZ domain-containing protein KCTD15 isoform X6
BTB/POZ domain-containing protein KCTD15 isoform X8
transcription initiation factor TFIID subunit 4-like
LSM14A mRNA processing body assembly factor, transcript variant X1
LSM14A mRNA processing body assembly factor, transcript variant X3
LSM14A mRNA processing body assembly factor, transcript variant X2
LSM14A mRNA processing body assembly factor, transcript variant X4
granule associated Rac and RHOG effector 1, transcript variant X1
granule associated Rac and RHOG effector 1, transcript variant X3
granule associated Rac and RHOG effector 1, transcript variant X2
granule associated Rac and RHOG effector protein 1
WT1 interacting protein, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 9 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
WT1 interacting protein, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
WT1 interacting protein, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Wilms tumor protein 1-interacting protein isoform X1
Wilms tumor protein 1-interacting protein isoform X2
Wilms tumor protein 1-interacting protein isoform X3
ubiquitin like modifier activating enzyme 2, transcript variant X1
ubiquitin like modifier activating enzyme 2, transcript variant X2
SUMO-activating enzyme subunit 2 isoform X1
SUMO-activating enzyme subunit 2 isoform X2
fatty acyl-CoA hydrolase precursor, medium chain-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
fatty acyl-CoA hydrolase precursor, medium chain-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
fatty acyl-CoA hydrolase precursor, medium chain-like isoform X2
fatty acyl-CoA hydrolase precursor, medium chain-like isoform X1
carboxylesterase 2, transcript variant X2
carboxylesterase 2, transcript variant X1
cytosolic iron-sulfur assembly component 2B, transcript variant X2
cytosolic iron-sulfur assembly component 2B, transcript variant X3
cytosolic iron-sulfur assembly component 2B, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
cytosolic iron-sulfur assembly component 2B, transcript variant X1
cytosolic iron-sulfur assembly component 2B
RRAD, Ras related glycolysis inhibitor and calcium channel regulator
pyruvate dehyrogenase phosphatase catalytic subunit 2, transcript variant X2
pyruvate dehyrogenase phosphatase catalytic subunit 2, transcript variant X1
pyruvate dehyrogenase phosphatase catalytic subunit 2, transcript variant X3
pyruvate dehyrogenase phosphatase catalytic subunit 2, transcript variant X4
pyruvate dehydrogenase [acetyl-transferring]-phosphatase 2, mitochondrial
NEDD8-activating enzyme E1 regulatory subunit
telomere repeat binding bouquet formation protein 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
telomere repeats-binding bouquet formation protein 1
dynein cytoplasmic 1 light intermediate chain 2
cytoplasmic dynein 1 light intermediate chain 2
uncharacterized LOC117001243, transcript variant X3
uncharacterized LOC117001243, transcript variant X2
uncharacterized LOC117001243, transcript variant X1
CKLF like MARVEL transmembrane domain containing 4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
CKLF-like MARVEL transmembrane domain-containing protein 4
CKLF like MARVEL transmembrane domain containing 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
CKLF-like MARVEL transmembrane domain-containing protein 3 isoform X1
CKLF like MARVEL transmembrane domain containing 3, transcript variant X2
CKLF-like MARVEL transmembrane domain-containing protein 3 isoform X2
CKLF like MARVEL transmembrane domain containing 3, transcript variant X3
CKLF-like MARVEL transmembrane domain-containing protein 3 isoform X3
CKLF like MARVEL transmembrane domain containing 3, transcript variant X4
spermatogenesis-associated protein 2-like protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
protein BEAN1-like, transcript variant X1
protein BEAN1-like, transcript variant X2
protein BEAN1-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
hydrocephalus-inducing protein homolog, transcript variant X1
hydrocephalus-inducing protein homolog, transcript variant X3
hydrocephalus-inducing protein homolog, transcript variant X2
hydrocephalus-inducing protein homolog isoform X1
hydrocephalus-inducing protein homolog isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
hydrocephalus-inducing protein homolog, transcript variant X4
hydrocephalus-inducing protein homolog isoform X3
hydrocephalus-inducing protein homolog isoform X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 71% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 78% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
putative ATP-dependent RNA helicase TDRD12
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase TDRD12
hydrocephalus-inducing protein homolog, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
peroxisomal coenzyme A diphosphatase NUDT7-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
vesicle amine transport 1 like, transcript variant X2
vesicle amine transport 1 like, transcript variant X1
synaptic vesicle membrane protein VAT-1 homolog-like isoform X2
synaptic vesicle membrane protein VAT-1 homolog-like isoform X1
hydrocephalus-inducing protein-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
hydrocephalus-inducing protein-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
hydrocephalus-inducing protein-like, transcript variant X3
hydrocephalus-inducing protein-like isoform X2
hydrocephalus-inducing protein-like isoform X3
hydrocephalus-inducing protein-like isoform X1
peroxisomal coenzyme A diphosphatase NUDT7-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
peroxisomal coenzyme A diphosphatase NUDT7-like, transcript variant X1
peroxisomal coenzyme A diphosphatase NUDT7-like isoform X1
peroxisomal coenzyme A diphosphatase NUDT7-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
peroxisomal coenzyme A diphosphatase NUDT7-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
serine/threonine-protein kinase pim-2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
nucleoside diphosphate-linked moiety X motif 19-like
putative ATP-dependent RNA helicase TDRD12, transcript variant X1
putative ATP-dependent RNA helicase TDRD12, transcript variant X2
putative ATP-dependent RNA helicase TDRD12 isoform X1
putative ATP-dependent RNA helicase TDRD12 isoform X2
ankyrin repeat domain 27, transcript variant X1
regulator of G protein signaling 9 binding protein
regulator of G-protein signaling 9-binding protein
ankyrin repeat domain 27, transcript variant X2
ankyrin repeat domain 27, transcript variant X3
ankyrin repeat domain-containing protein 27
neural-cadherin-like, transcript variant X1
neural-cadherin-like, transcript variant X2
dpy-19 like C-mannosyltransferase 3, transcript variant X1
probable C-mannosyltransferase DPY19L3 isoform X1
dpy-19 like C-mannosyltransferase 3, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
dpy-19 like C-mannosyltransferase 3, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
probable C-mannosyltransferase DPY19L3 isoform X2
zinc finger protein 507, transcript variant X2
zinc finger protein 507, transcript variant X1
uncharacterized LOC117001421, transcript variant X1
uncharacterized LOC117001421, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 70% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 19 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: teashirt homolog 3-like
zinc finger protein 536, transcript variant X14
zinc finger protein 536, transcript variant X4
zinc finger protein 536, transcript variant X12
zinc finger protein 536, transcript variant X9
zinc finger protein 536, transcript variant X15
zinc finger protein 536, transcript variant X1
zinc finger protein 536, transcript variant X11
zinc finger protein 536, transcript variant X10
zinc finger protein 536, transcript variant X13
zinc finger protein 536, transcript variant X2
zinc finger protein 536, transcript variant X7
zinc finger protein 536, transcript variant X8
zinc finger protein 536, transcript variant X5
zinc finger protein 536, transcript variant X3
zinc finger protein 536, transcript variant X6
zinc finger protein 536, transcript variant X16
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
zinc finger protein 536, transcript variant X18
zinc finger protein 536, transcript variant X17
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
zinc finger protein 536, transcript variant X19
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
unconventional prefoldin RPB5 interactor 1
uncharacterized protein F13E9.13, mitochondrial-like, transcript variant X2
uncharacterized protein F13E9.13, mitochondrial-like, transcript variant X5
uncharacterized protein F13E9.13, mitochondrial-like, transcript variant X3
uncharacterized protein F13E9.13, mitochondrial-like isoform X2
uncharacterized protein F13E9.13, mitochondrial-like, transcript variant X1
uncharacterized protein F13E9.13, mitochondrial-like isoform X1
uncharacterized protein F13E9.13, mitochondrial-like, transcript variant X4
uncharacterized protein F13E9.13, mitochondrial-like isoform X3
pleckstrin homology and FYVE domain containing 1, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
protein C19orf12 homolog, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
protein C19orf12 homolog, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
protein C19orf12 homolog, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
pleckstrin homology and FYVE domain containing 1, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
pleckstrin homology and FYVE domain containing 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
pleckstrin homology and FYVE domain containing 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
pleckstrin homology and FYVE domain containing 1, transcript variant X5
pleckstrin homology and FYVE domain containing 1, transcript variant X7
pleckstrin homology and FYVE domain containing 1, transcript variant X6
pleckstrin homology domain-containing family F member 1
POP4 homolog, ribonuclease P/MRP subunit, transcript variant X1
POP4 homolog, ribonuclease P/MRP subunit, transcript variant X2
ribonuclease P protein subunit p29 isoform X1
ribonuclease P protein subunit p29 isoform X2
V-set and transmembrane domain containing 2B
V-set and transmembrane domain-containing protein 2B
cytochrome b-c1 complex subunit Rieske, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
vacuolar protein sorting-associated protein 35
myosin light chain kinase 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
myosin light chain kinase 3, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
DnaJ heat shock protein family (Hsp40) member A2
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: crooked neck-like protein 1
integrin alpha FG-GAP repeat containing 1
phosphorylase kinase regulatory subunit beta, transcript variant X4
phosphorylase kinase regulatory subunit beta, transcript variant X1
phosphorylase kinase regulatory subunit beta, transcript variant X5
phosphorylase b kinase regulatory subunit beta isoform X2
phosphorylase kinase regulatory subunit beta, transcript variant X3
phosphorylase kinase regulatory subunit beta, transcript variant X2
phosphorylase b kinase regulatory subunit beta isoform X1
phosphorylase b kinase regulatory subunit beta isoform X3
siah E3 ubiquitin protein ligase 1, transcript variant X2
siah E3 ubiquitin protein ligase 1, transcript variant X1
siah E3 ubiquitin protein ligase 1, transcript variant X3
E3 ubiquitin-protein ligase SIAH1 isoform X1
E3 ubiquitin-protein ligase SIAH1 isoform X2
uncharacterized LOC117001325, transcript variant X5
uncharacterized LOC117001325, transcript variant X7
uncharacterized LOC117001325, transcript variant X6
uncharacterized LOC117001325, transcript variant X3
uncharacterized LOC117001325, transcript variant X4
uncharacterized LOC117001325, transcript variant X8
uncharacterized LOC117001325, transcript variant X1
uncharacterized LOC117001325, transcript variant X2
zinc finger protein 423, transcript variant X1
zinc finger protein 423, transcript variant X2
zinc finger protein 423, transcript variant X3
uncharacterized LOC117001278, transcript variant X2
uncharacterized LOC117001278, transcript variant X1
uncharacterized LOC117001278, transcript variant X3
CTD nuclear envelope phosphatase 1 regulatory subunit 1
nuclear envelope phosphatase-regulatory subunit 1
HEAT repeat containing 3, transcript variant X2
HEAT repeat-containing protein 3 isoform X2
HEAT repeat containing 3, transcript variant X1
HEAT repeat-containing protein 3 isoform X1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 4 codons
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: adenylate cyclase type 7
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: bromodomain-containing protein 7
NKD inhibitor of WNT signaling pathway 1, transcript variant X2
NKD inhibitor of WNT signaling pathway 1, transcript variant X1
protein naked cuticle homolog 1 isoform X1
protein naked cuticle homolog 1 isoform X2
CYLD lysine 63 deubiquitinase, transcript variant X2
CYLD lysine 63 deubiquitinase, transcript variant X1
ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
ubiquitin carboxyl-terminal hydrolase CYLD isoform X2
spalt like transcription factor 1, transcript variant X3
spalt like transcription factor 1, transcript variant X5
spalt like transcription factor 1, transcript variant X4
spalt like transcription factor 1, transcript variant X2
spalt like transcription factor 1, transcript variant X1
uncharacterized LOC117001616, transcript variant X2
uncharacterized LOC117001616, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
uncharacterized LOC117001612, transcript variant X2
uncharacterized LOC117001612, transcript variant X1
uncharacterized LOC117001612, transcript variant X3
TOX high mobility group box family member 3, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 17 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
TOX high mobility group box family member 3, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 17 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
TOX high mobility group box family member 3, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 17 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
TOX high mobility group box family member 3, transcript variant X5
TOX high mobility group box family member 3, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 17 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
TOX high mobility group box family member 3, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 17 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
TOX high mobility group box family member 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 17 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
TOX high mobility group box family member 3 isoform X4
TOX high mobility group box family member 3 isoform X3
TOX high mobility group box family member 3 isoform X2
TOX high mobility group box family member 3 isoform X1
chromodomain helicase DNA binding protein 9, transcript variant X6
chromodomain helicase DNA binding protein 9, transcript variant X1
chromodomain helicase DNA binding protein 9, transcript variant X3
chromodomain helicase DNA binding protein 9, transcript variant X2
chromodomain-helicase-DNA-binding protein 9 isoform X6
chromodomain-helicase-DNA-binding protein 9 isoform X1
chromodomain-helicase-DNA-binding protein 9 isoform X3
chromodomain-helicase-DNA-binding protein 9 isoform X2
chromodomain helicase DNA binding protein 9, transcript variant X4
chromodomain-helicase-DNA-binding protein 9 isoform X4
chromodomain helicase DNA binding protein 9, transcript variant X5
chromodomain-helicase-DNA-binding protein 9 isoform X5
AKT interacting protein, transcript variant X3
AKT interacting protein, transcript variant X1
AKT interacting protein, transcript variant X2
uncharacterized LOC117001240, transcript variant X1
uncharacterized LOC117001240, transcript variant X3
uncharacterized LOC117001240, transcript variant X2
uncharacterized LOC117001239, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
uncharacterized LOC117001239, transcript variant X1
uncharacterized LOC117001239, transcript variant X3
FTO alpha-ketoglutarate dependent dioxygenase, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
FTO alpha-ketoglutarate dependent dioxygenase, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
alpha-ketoglutarate-dependent dioxygenase FTO isoform X1
FTO alpha-ketoglutarate dependent dioxygenase, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
alpha-ketoglutarate-dependent dioxygenase FTO isoform X2
iroquois-class homeodomain protein IRX-3
uncharacterized LOC117001404, transcript variant X3
uncharacterized LOC117001404, transcript variant X2
uncharacterized LOC117001404, transcript variant X5
uncharacterized LOC117001404, transcript variant X1
uncharacterized LOC117001404, transcript variant X4
uncharacterized LOC117001324, transcript variant X2
uncharacterized LOC117001324, transcript variant X3
uncharacterized LOC117001324, transcript variant X1
uncharacterized LOC117001324, transcript variant X4
iroquois-class homeodomain protein IRX-5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
iroquois-class homeodomain protein IRX-6
lysophosphatidylcholine acyltransferase 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: sodium-dependent noradrenaline transporter
solute carrier family 12 member 4, transcript variant X3
solute carrier family 12 member 4, transcript variant X2
solute carrier family 12 member 4, transcript variant X1
solute carrier family 12 member 4, transcript variant X4
solute carrier family 12 member 4, transcript variant X5
solute carrier family 12 member 4 isoform X2
solute carrier family 12 member 4 isoform X1
solute carrier family 12 member 4 isoform X4
solute carrier family 12 member 4 isoform X3
dipeptidase 2-like, transcript variant X1
dipeptidase 2-like, transcript variant X2
dipeptidase 2-like, transcript variant X3
galanin receptor type 1-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
galanin receptor type 1-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
galanin receptor type 1-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
galanin receptor type 1-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 69% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX28
dihydrouridine synthase 2, transcript variant X2
dihydrouridine synthase 2, transcript variant X1
tRNA-dihydrouridine(20) synthase [NAD(P)+]-like
nuclear factor of activated T cells 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
nuclear factor of activated T cells 3, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
nuclear factor of activated T-cells, cytoplasmic 3 isoform X1
nuclear factor of activated T-cells, cytoplasmic 3 isoform X2
epithelial splicing regulatory protein 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
protein arginine methyltransferase 7, transcript variant X1
protein arginine methyltransferase 7, transcript variant X4
protein arginine methyltransferase 7, transcript variant X2
protein arginine methyltransferase 7, transcript variant X3
solute carrier family 7 member 6 opposite strand, transcript variant X2
solute carrier family 7 member 6 opposite strand, transcript variant X1
probable RNA polymerase II nuclear localization protein SLC7A6OS isoform X1
probable RNA polymerase II nuclear localization protein SLC7A6OS isoform X2
solute carrier family 7 member 6, transcript variant X6
solute carrier family 7 member 6, transcript variant X4
solute carrier family 7 member 6, transcript variant X2
solute carrier family 7 member 6, transcript variant X1
solute carrier family 7 member 6, transcript variant X5
solute carrier family 7 member 6, transcript variant X3
receptor-interacting serine/threonine-protein kinase 2-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
oxidative stress induced growth inhibitor 1, transcript variant X2
oxidative stress induced growth inhibitor 1, transcript variant X1
oxidative stress induced growth inhibitor 1, transcript variant X3
oxidative stress-induced growth inhibitor 1
N-terminal EF-hand calcium binding protein 2
N-terminal EF-hand calcium-binding protein 2
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon
LOW QUALITY PROTEIN: putative sodium-coupled neutral amino acid transporter 8
membrane bound transcription factor peptidase, site 1
membrane-bound transcription factor site-1 protease
hydroxysteroid dehydrogenase like 1, transcript variant X1
hydroxysteroid dehydrogenase like 1, transcript variant X2
inactive hydroxysteroid dehydrogenase-like protein 1 isoform X1
inactive hydroxysteroid dehydrogenase-like protein 1 isoform X2
dynein axonemal assembly factor 1, transcript variant X1
dynein axonemal assembly factor 1, transcript variant X2
dynein axonemal assembly factor 1, transcript variant X3
dynein axonemal assembly factor 1 isoform X1
dynein axonemal assembly factor 1 isoform X2
dynein axonemal assembly factor 1 isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
tumor necrosis factor receptor type 1-associated DEATH domain protein
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9, transcript variant X1
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9, transcript variant X2
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9
phagosome assembly factor 1, transcript variant X2
phagosome assembly factor 1, transcript variant X1
core-binding factor subunit beta, transcript variant X1
core-binding factor subunit beta, transcript variant X2
core-binding factor subunit beta isoform X1
core-binding factor subunit beta isoform X2
G protein subunit alpha o1, transcript variant X2
G protein subunit alpha o1, transcript variant X1
guanine nucleotide-binding protein G(o) subunit alpha isoform X1
guanine nucleotide-binding protein G(o) subunit alpha isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
cleavage and polyadenylation specificity factor subunit 5
2-oxoglutarate and iron dependent oxygenase domain containing 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
nuclear pore complex protein Nup93 isoform X1
nuclear pore complex protein Nup93 isoform X3
nuclear pore complex protein Nup93 isoform X2
solute carrier family 12 member 3, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 18 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
solute carrier family 12 member 3 isoform X2
solute carrier family 12 member 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
solute carrier family 12 member 3 isoform X1
BCAR1 scaffold protein, Cas family member, transcript variant X2
breast cancer anti-estrogen resistance protein 1 isoform X2
BCAR1 scaffold protein, Cas family member, transcript variant X1
breast cancer anti-estrogen resistance protein 1 isoform X1
probable D-lactate dehydrogenase, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 32% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 32% coverage of the annotated genomic feature by RNAseq alignments
probable D-lactate dehydrogenase, mitochondrial, transcript variant X1
probable D-lactate dehydrogenase, mitochondrial, transcript variant X3
probable D-lactate dehydrogenase, mitochondrial, transcript variant X2
probable D-lactate dehydrogenase, mitochondrial isoform X3
probable D-lactate dehydrogenase, mitochondrial isoform X1
probable D-lactate dehydrogenase, mitochondrial isoform X2
zinc and ring finger 1, transcript variant X2
zinc and ring finger 1, transcript variant X1
WD repeat domain 59, transcript variant X1
WD repeat domain 59, transcript variant X2
mixed lineage kinase domain like pseudokinase
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
mixed lineage kinase domain-like protein
pyruvate dehydrogenase phosphatase regulatory subunit, transcript variant X1
pyruvate dehydrogenase phosphatase regulatory subunit, transcript variant X2
pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial isoform X1
pyruvate dehydrogenase phosphatase regulatory subunit, transcript variant X3
pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial isoform X2
ST3 beta-galactoside alpha-2,3-sialyltransferase 2, transcript variant X2
ST3 beta-galactoside alpha-2,3-sialyltransferase 2, transcript variant X1
CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
conserved oligomeric Golgi complex subunit 4
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF00611
transfer RNA glycine (anticodon GCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
uncharacterized oxidoreductase C663.06c-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
MTSS I-BAR domain containing 2, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
MTSS I-BAR domain containing 2, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
MTSS I-BAR domain containing 2, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
MTSS I-BAR domain containing 2, transcript variant X9
MTSS I-BAR domain containing 2, transcript variant X4
MTSS I-BAR domain containing 2, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
MTSS I-BAR domain containing 2, transcript variant X2
MTSS I-BAR domain containing 2, transcript variant X3
MTSS I-BAR domain containing 2, transcript variant X1
cap methyltransferase 2, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
cap methyltransferase 2, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
cap methyltransferase 2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
cap methyltransferase 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
cap methyltransferase 2, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
aspartate aminotransferase, mitochondrial
putative sodium-coupled neutral amino acid transporter 7
CCR4-NOT transcription complex subunit 1, transcript variant X1
CCR4-NOT transcription complex subunit 1, transcript variant X3
CCR4-NOT transcription complex subunit 1, transcript variant X6
CCR4-NOT transcription complex subunit 1, transcript variant X7
CCR4-NOT transcription complex subunit 1, transcript variant X4
CCR4-NOT transcription complex subunit 1, transcript variant X5
CCR4-NOT transcription complex subunit 1, transcript variant X8
CCR4-NOT transcription complex subunit 1, transcript variant X2
CCR4-NOT transcription complex subunit 1 isoform X1
CCR4-NOT transcription complex subunit 1 isoform X2
CCR4-NOT transcription complex subunit 1 isoform X5
CCR4-NOT transcription complex subunit 1 isoform X6
CCR4-NOT transcription complex subunit 1 isoform X3
CCR4-NOT transcription complex subunit 1 isoform X4
CCR4-NOT transcription complex subunit 1 isoform X7
COORDINATES: nucleotide motif:Rfam:12.0:RF00407
COORDINATES: nucleotide motif:Rfam:12.0:RF00404
SET domain containing 6, protein lysine methyltransferase
transfer RNA lysine (anticodon UUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
SNF-related serine/threonine-protein kinase-like, transcript variant X1
SNF-related serine/threonine-protein kinase-like, transcript variant X2
SNF-related serine/threonine-protein kinase-like
agouti related neuropeptide, transcript variant X2
agouti related neuropeptide, transcript variant X1
corticosteroid 11-beta-dehydrogenase isozyme 2
formin homology 2 domain containing 1, transcript variant X2
FH1/FH2 domain-containing protein 1 isoform X2
formin homology 2 domain containing 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
FH1/FH2 domain-containing protein 1 isoform X1
solute carrier family 9 member A5, transcript variant X5
solute carrier family 9 member A5, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
solute carrier family 9 member A5, transcript variant X1
solute carrier family 9 member A5, transcript variant X2
solute carrier family 9 member A5, transcript variant X4
pleckstrin homology and RhoGEF domain containing G4, transcript variant X1
pleckstrin homology and RhoGEF domain containing G4, transcript variant X2
pleckstrin homology and RhoGEF domain containing G4, transcript variant X4
pleckstrin homology and RhoGEF domain containing G4, transcript variant X5
pleckstrin homology and RhoGEF domain containing G4, transcript variant X6
pleckstrin homology and RhoGEF domain containing G4, transcript variant X3
tubulin polymerization promoting protein family member 3
tubulin polymerization-promoting protein family member 3
zinc finger DHHC-type containing 1, transcript variant X2
zinc finger DHHC-type containing 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
C-type lectin domain family 18 member A-like
RNA-binding Raly-like protein, transcript variant X2
RNA-binding Raly-like protein, transcript variant X1
RNA-binding Raly-like protein isoform X1
RNA-binding Raly-like protein isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 69% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
capping protein regulator and myosin 1 linker 2
capping protein, Arp2/3 and myosin-I linker protein 2
CCCTC-binding factor, transcript variant X3
CCCTC-binding factor, transcript variant X4
CCCTC-binding factor, transcript variant X1
CCCTC-binding factor, transcript variant X2
RHO family interacting cell polarization regulator 1, transcript variant X4
RHO family interacting cell polarization regulator 1, transcript variant X1
RHO family interacting cell polarization regulator 1, transcript variant X3
rho family-interacting cell polarization regulator 1 isoform X1
rho family-interacting cell polarization regulator 1 isoform X3
rho family-interacting cell polarization regulator 1 isoform X4
RHO family interacting cell polarization regulator 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
rho family-interacting cell polarization regulator 1 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 49% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 75% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
transfer RNA histidin (anticodon GUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
phosphatidylcholine-sterol acyltransferase
uncharacterized protein KIAA0895-like homolog
engulfment and cell motility 3, transcript variant X1
engulfment and cell motility 3, transcript variant X2
engulfment and cell motility 3, transcript variant X3
engulfment and cell motility 3, transcript variant X4
engulfment and cell motility protein 3 isoform X1
engulfment and cell motility protein 3 isoform X2
engulfment and cell motility protein 3 isoform X3
engulfment and cell motility protein 3 isoform X4
E2F transcription factor 4, transcript variant X2
E2F transcription factor 4, transcript variant X1
exocyst complex component 3 like 1, transcript variant X1
exocyst complex component 3 like 1, transcript variant X2
exocyst complex component 3 like 1, transcript variant X3
exocyst complex component 3-like protein isoform X1
exocyst complex component 3-like protein isoform X2
exocyst complex component 3-like protein isoform X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
hydrocephalus-inducing protein homolog isoform X5
RAN binding protein 10, transcript variant X2
RAN binding protein 10, transcript variant X1
ring finger and SPRY domain containing 1
RING finger and SPRY domain-containing protein 1
proteasome activator subunit 3 interacting protein 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
homocysteine inducible ER protein with ubiquitin like domain 1
homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein
partitioning defective 6 homolog alpha-like, transcript variant X1
partitioning defective 6 homolog alpha-like, transcript variant X2
partitioning defective 6 homolog alpha-like isoform X1
partitioning defective 6 homolog alpha-like isoform X2
enkurin domain containing 1, transcript variant X1
enkurin domain containing 1, transcript variant X2
glucose-fructose oxidoreductase domain containing 2, transcript variant X1
glucose-fructose oxidoreductase domain containing 2, transcript variant X2
glucose-fructose oxidoreductase domain containing 2, transcript variant X3
glucose-fructose oxidoreductase domain-containing protein 2
uncharacterized LOC117001445, transcript variant X1
uncharacterized protein LOC117001445 isoform X1
uncharacterized LOC117001445, transcript variant X2
uncharacterized protein LOC117001445 isoform X2
cytokine induced apoptosis inhibitor 1, transcript variant X1
cytokine induced apoptosis inhibitor 1, transcript variant X2
ubiquinone biosynthesis protein COQ9, mitochondrial
DNA-directed RNA polymerase II subunit RPB3
coiled-coil domain-containing protein 102A
adhesion G-protein coupled receptor G1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
zona pellucida sperm-binding protein 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 41% coverage of the annotated genomic feature by RNAseq alignments
katanin regulatory subunit B1, transcript variant X2
katanin regulatory subunit B1, transcript variant X1
katanin p80 WD40 repeat-containing subunit B1 isoform X1
katanin p80 WD40 repeat-containing subunit B1 isoform X2
kinesin family member C3, transcript variant X1
kinesin family member C3, transcript variant X3
kinesin family member C3, transcript variant X2
kinesin family member C3, transcript variant X4
cyclic nucleotide gated channel subunit beta 1
cyclic nucleotide-gated cation channel beta-1
zinc finger protein 319, transcript variant X2
zinc finger protein 319, transcript variant X3
zinc finger protein 319, transcript variant X1
U6 snRNA biogenesis phosphodiesterase 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
U6 snRNA biogenesis phosphodiesterase 1, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 13 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
U6 snRNA biogenesis phosphodiesterase 1, transcript variant X1
cilia and flagella associated protein 20, transcript variant X2
cilia- and flagella-associated protein 20 isoform X2
cilia and flagella associated protein 20, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
cilia- and flagella-associated protein 20 isoform X1
casein kinase 2 alpha 2, transcript variant X2
casein kinase 2 alpha 2, transcript variant X1
DNA replication complex GINS protein PSF3
NDRG family member 4, transcript variant X1
NDRG family member 4, transcript variant X2
NDRG family member 4, transcript variant X3
NDRG family member 4, transcript variant X4
uncharacterized LOC117001680, transcript variant X3
uncharacterized LOC117001680, transcript variant X2
uncharacterized LOC117001680, transcript variant X1
MAF bZIP transcription factor, transcript variant X2
MAF bZIP transcription factor, transcript variant X1
uncharacterized LOC117001606, transcript variant X2
uncharacterized LOC117001606, transcript variant X3
uncharacterized LOC117001606, transcript variant X4
uncharacterized LOC117001606, transcript variant X1
C-X9-C motif containing 2, transcript variant X1
C-X9-C motif containing 2, transcript variant X2
C-X9-C motif containing 2, transcript variant X3
COX assembly mitochondrial protein 2 homolog
centromere protein N, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
centromere protein N, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
protein phosphatase 1 regulatory subunit 3E-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
glycine cleavage system H protein, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
polycystic kidney disease protein 1-like 2
beta-carotene oxygenase 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
beta-carotene oxygenase 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
beta,beta-carotene 15,15'-dioxygenase isoform X1
beta,beta-carotene 15,15'-dioxygenase isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 54% coverage of the annotated genomic feature by RNAseq alignments
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2
short chain dehydrogenase/reductase family 42E, member 1
short-chain dehydrogenase/reductase family 42E member 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
17-beta-hydroxysteroid dehydrogenase type 2
arylamine N-acetyltransferase, pineal gland isozyme NAT-3-like
arylamine N-acetyltransferase, liver isozyme-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
arylamine N-acetyltransferase, liver isozyme-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
arylamine N-acetyltransferase, liver isozyme-like
arylamine N-acetyltransferase, pineal gland isozyme NAT-10
malonyl-CoA decarboxylase, mitochondrial
potassium voltage-gated channel modifier subfamily G member 4, transcript variant X1
potassium voltage-gated channel modifier subfamily G member 4, transcript variant X2
potassium voltage-gated channel subfamily G member 4
WAP four-disulfide core domain 1, transcript variant X1
WAP four-disulfide core domain 1, transcript variant X2
WAP four-disulfide core domain protein 1
ATPase secretory pathway Ca2+ transporting 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments
calcium-transporting ATPase type 2C member 2
coactosin like F-actin binding protein 1
kelch like family member 36, transcript variant X1
kelch like family member 36, transcript variant X2
ubiquitin carboxyl-terminal hydrolase 10
cysteine rich secretory protein LCCL domain containing 2
cysteine-rich secretory protein LCCL domain-containing 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
zinc finger DHHC-type palmitoyltransferase 7, transcript variant X2
zinc finger DHHC-type palmitoyltransferase 7, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
methenyltetrahydrofolate synthetase domain containing, transcript variant X2
methenyltetrahydrofolate synthetase domain containing, transcript variant X1
methenyltetrahydrofolate synthase domain-containing protein isoform X2
methenyltetrahydrofolate synthase domain-containing protein isoform X1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: forkhead box protein F1
dual specificity protein phosphatase 22-B-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments
cytochrome c oxidase subunit 4 isoform 1, mitochondrial
GINS complex subunit 2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
GINS complex subunit 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
DNA replication complex GINS protein PSF2
Gse1 coiled-coil protein, transcript variant X4
Gse1 coiled-coil protein, transcript variant X2
Gse1 coiled-coil protein, transcript variant X3
Gse1 coiled-coil protein, transcript variant X1
Gse1 coiled-coil protein, transcript variant X5
KIAA0513 ortholog, transcript variant X2
KIAA0513 ortholog, transcript variant X3
KIAA0513 ortholog, transcript variant X1
uncharacterized protein KIAA0513 homolog isoform X1
uncharacterized protein KIAA0513 homolog isoform X2
transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
microtubule associated protein 1 light chain 3 beta
microtubule-associated proteins 1A/1B light chain 3B
zinc finger CCHC domain-containing protein 14
kelch domain containing 4, transcript variant X3
kelch domain containing 4, transcript variant X2
kelch domain-containing protein 4 isoform X3
kelch domain-containing protein 4 isoform X2
kelch domain containing 4, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
kelch domain containing 4, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
kelch domain-containing protein 4 isoform X1
kelch domain-containing protein 4 isoform X4
uncharacterized LOC117001494, transcript variant X1
uncharacterized LOC117001494, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 55 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
large neutral amino acids transporter small subunit 1
BTG3 associated nuclear protein, transcript variant X1
BTG3 associated nuclear protein, transcript variant X2
zinc finger protein, FOG family member 1, transcript variant X1
zinc finger protein, FOG family member 1, transcript variant X2
cell death inducing DFFA like effector c, transcript variant X2
cell death inducing DFFA like effector c, transcript variant X1
cell death inducing DFFA like effector c, transcript variant X3
zinc finger CCCH-type containing 18, transcript variant X1
zinc finger CCCH-type containing 18, transcript variant X2
zinc finger CCCH domain-containing protein 18 isoform X1
zinc finger CCCH domain-containing protein 18 isoform X2
zinc finger CCCH-type containing 18, transcript variant X3
zinc finger CCCH-type containing 18, transcript variant X4
zinc finger CCCH domain-containing protein 18 isoform X3
zinc finger CCCH domain-containing protein 18 isoform X4
cytochrome b-245 light chain, transcript variant X2
cytochrome b-245 light chain, transcript variant X1
ring finger protein 166, transcript variant X3
ring finger protein 166, transcript variant X2
ring finger protein 166, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
piezo type mechanosensitive ion channel component 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
piezo-type mechanosensitive ion channel component 1
chromatin licensing and DNA replication factor 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: N-acetylgalactosamine-6-sulfatase
trafficking protein particle complex subunit 2L
trafficking protein particle complex subunit 2-like protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
embryonic polyadenylate-binding protein 2
CBFA2/RUNX1 partner transcriptional co-repressor 3, transcript variant X2
CBFA2/RUNX1 partner transcriptional co-repressor 3, transcript variant X6
CBFA2/RUNX1 partner transcriptional co-repressor 3, transcript variant X3
CBFA2/RUNX1 partner transcriptional co-repressor 3, transcript variant X1
CBFA2/RUNX1 partner transcriptional co-repressor 3, transcript variant X4
CBFA2/RUNX1 partner transcriptional co-repressor 3, transcript variant X5
acyl-CoA synthetase family member 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
acyl-CoA synthetase family member 3, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
malonate--CoA ligase ACSF3, mitochondrial
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments
putative solute carrier family 22 member 31
ankyrin repeat domain-containing protein 11-like, transcript variant X1
ankyrin repeat domain-containing protein 11-like, transcript variant X2
ankyrin repeat domain-containing protein 11-like
LOW QUALITY PROTEIN: sulfotransferase 2B1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
cyclin-dependent kinase 10, transcript variant X1
cyclin-dependent kinase 10, transcript variant X2
cyclin-dependent kinase 10, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
zinc finger protein 276-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 5 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
zinc finger protein 276-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 5 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
zinc finger protein 276-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
Fanconi anemia group A protein-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Fanconi anemia group A protein-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Fanconi anemia group A protein-like isoform X2
Fanconi anemia group A protein-like isoform X1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 9 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: protein spire homolog 2-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 3 bases in 2 codons
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: transcription factor 25-like
melanocyte-stimulating hormone receptor-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 268 Proteins, and 57% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: melanocyte-stimulating hormone receptor-like
differentially expressed in FDCP 8 homolog, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
differentially expressed in FDCP 8 homolog, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
differentially expressed in FDCP 8 homolog, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
differentially expressed in FDCP 8 homolog, transcript variant X3
differentially expressed in FDCP 8 homolog, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
differentially expressed in FDCP 8 homolog isoform X5
differentially expressed in FDCP 8 homolog isoform X2
differentially expressed in FDCP 8 homolog isoform X3
differentially expressed in FDCP 8 homolog, transcript variant X1
differentially expressed in FDCP 8 homolog, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
differentially expressed in FDCP 8 homolog isoform X1
differentially expressed in FDCP 8 homolog isoform X4
dysbindin domain-containing protein 1-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: dysbindin domain-containing protein 1-like
piezo-type mechanosensitive ion channel component 1-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
LOW QUALITY PROTEIN: piezo-type mechanosensitive ion channel component 1-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
adenine phosphoribosyltransferase-like, transcript variant X2
adenine phosphoribosyltransferase-like, transcript variant X1
adenine phosphoribosyltransferase-like isoform X2
adenine phosphoribosyltransferase-like isoform X1
N-acetylgalactosamine-6-sulfatase-like, transcript variant X1
N-acetylgalactosamine-6-sulfatase-like, transcript variant X3
N-acetylgalactosamine-6-sulfatase-like isoform X1
N-acetylgalactosamine-6-sulfatase-like isoform X3
N-acetylgalactosamine-6-sulfatase-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
N-acetylgalactosamine-6-sulfatase-like isoform X2
embryonic polyadenylate-binding protein 2-A-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
protein CBFA2T3-like, transcript variant X6
protein CBFA2T3-like, transcript variant X5
protein CBFA2T3-like, transcript variant X7
protein CBFA2T3-like, transcript variant X2
protein CBFA2T3-like, transcript variant X3
protein CBFA2T3-like, transcript variant X4
protein CBFA2T3-like, transcript variant X1
malonate--CoA ligase ACSF3, mitochondrial-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
malonate--CoA ligase ACSF3, mitochondrial-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
malonate--CoA ligase ACSF3, mitochondrial-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 70% coverage of the annotated genomic feature by RNAseq alignments
putative solute carrier family 22 member 31, transcript variant X1
putative solute carrier family 22 member 31, transcript variant X2
putative solute carrier family 22 member 31 isoform X1
putative solute carrier family 22 member 31 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments
cyclin-dependent kinase 10-like, transcript variant X1
cyclin-dependent kinase 10-like, transcript variant X2
cyclin-dependent kinase 10-like isoform X1
cyclin-dependent kinase 10-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 7 bases in 6 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 7 bases in 6 codons; deleted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: Fanconi anemia group A protein-like
spire type actin nucleation factor 2, transcript variant X1
spire type actin nucleation factor 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 269 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 32 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transport and golgi organization 6 homolog
transport and Golgi organization protein 6 homolog
hyaluronan synthase 3, transcript variant X2
hyaluronan synthase 3, transcript variant X1
hyaluronan synthase 3, transcript variant X3
chromosome transmission fidelity factor 8, transcript variant X2
chromosome transmission fidelity factor 8, transcript variant X1
chromosome transmission fidelity protein 8 homolog isoform X1
chromosome transmission fidelity protein 8 homolog isoform X2
U3 small nucleolar RNA-associated protein 4 homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
vacuolar protein sorting-associated protein 4A
conserved oligomeric Golgi complex subunit 8
nucleolar pre-rRNA processing protein NIP7
60S ribosome subunit biogenesis protein NIP7 homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transmembrane emp24 domain-containing protein 6
telomeric repeat binding factor 2, transcript variant X3
telomeric repeat binding factor 2, transcript variant X2
telomeric repeat binding factor 2, transcript variant X4
telomeric repeat binding factor 2, transcript variant X1
telomeric repeat-binding factor 2 isoform X3
telomeric repeat-binding factor 2 isoform X2
telomeric repeat-binding factor 2 isoform X4
telomeric repeat-binding factor 2 isoform X1
nuclear factor of activated T cells 5, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
nuclear factor of activated T cells 5, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
nuclear factor of activated T-cells 5 isoform X1
nuclear factor of activated T-cells 5 isoform X2
nuclear factor of activated T cells 5, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
nuclear factor of activated T cells 5, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
nuclear factor of activated T cells 5, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
nuclear factor of activated T cells 5, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
nuclear factor of activated T cells 5, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
nuclear factor of activated T cells 5, transcript variant X7
nuclear factor of activated T-cells 5 isoform X4
nuclear factor of activated T-cells 5 isoform X3
nuclear factor of activated T cells 5, transcript variant X9
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
nuclear factor of activated T-cells 5 isoform X5
WW domain containing E3 ubiquitin protein ligase 2, transcript variant X1
WW domain containing E3 ubiquitin protein ligase 2, transcript variant X2
NEDD4-like E3 ubiquitin-protein ligase WWP2 isoform X1
NEDD4-like E3 ubiquitin-protein ligase WWP2 isoform X2
26S proteasome non-ATPase regulatory subunit 7
zinc finger homeobox 3, transcript variant X1
zinc finger homeobox 3, transcript variant X5
zinc finger homeobox 3, transcript variant X2
zinc finger homeobox 3, transcript variant X3
zinc finger homeobox 3, transcript variant X4
zinc finger homeobox protein 3 isoform X1
zinc finger homeobox protein 3 isoform X2
uncharacterized LOC117001378, transcript variant X3
uncharacterized LOC117001378, transcript variant X2
uncharacterized LOC117001378, transcript variant X4
uncharacterized LOC117001378, transcript variant X6
uncharacterized LOC117001378, transcript variant X5
uncharacterized LOC117001378, transcript variant X1
pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
dihydroorotate dehydrogenase (quinone), transcript variant X1
dihydroorotate dehydrogenase (quinone), transcript variant X3
dihydroorotate dehydrogenase (quinone), transcript variant X4
dihydroorotate dehydrogenase (quinone), transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
dihydroorotate dehydrogenase (quinone), mitochondrial isoform X1
dihydroorotate dehydrogenase (quinone), mitochondrial isoform X3
dihydroorotate dehydrogenase (quinone), mitochondrial isoform X4
dihydroorotate dehydrogenase (quinone), mitochondrial isoform X2
IST1 factor associated with ESCRT-III, transcript variant X1
IST1 factor associated with ESCRT-III, transcript variant X2
IST1 factor associated with ESCRT-III, transcript variant X3
zinc finger protein 821, transcript variant X1
zinc finger protein 821, transcript variant X7
zinc finger protein 821, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
zinc finger protein 821, transcript variant X4
zinc finger protein 821, transcript variant X5
zinc finger protein 821, transcript variant X3
zinc finger protein 821, transcript variant X2
zinc finger protein 821, transcript variant X6
adaptor related protein complex 1 subunit gamma 1
COORDINATES: nucleotide motif:Rfam:12.0:RF00576
PH domain and leucine rich repeat protein phosphatase 2
PH domain leucine-rich repeat-containing protein phosphatase 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 15 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
telomeric repeat-binding factor 2-interacting protein 1
lysyl-tRNA synthetase 1, transcript variant X2
lysyl-tRNA synthetase 1, transcript variant X1
adenosine deaminase tRNA specific 1, transcript variant X1
adenosine deaminase tRNA specific 1, transcript variant X3
adenosine deaminase tRNA specific 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
adenosine deaminase tRNA specific 1, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
adenosine deaminase tRNA specific 1, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
adenosine deaminase tRNA specific 1, transcript variant X7
adenosine deaminase tRNA specific 1, transcript variant X5
adenosine deaminase tRNA specific 1, transcript variant X4
tRNA-specific adenosine deaminase 1 isoform X1
tRNA-specific adenosine deaminase 1 isoform X3
tRNA-specific adenosine deaminase 1 isoform X4
tRNA-specific adenosine deaminase 1 isoform X2
GABA type A receptor associated protein like 2, transcript variant X2
GABA type A receptor associated protein like 2, transcript variant X1
gamma-aminobutyric acid receptor-associated protein-like 2