Parus major isolate Abel chromosome 26, Parus_major1.1, whole genome shotgun sequence.
type: Entry
definition: Parus major isolate Abel chromosome 26, Parus_major1.1, whole genome shotgun sequence.
sequence version: NC_031795.1
sequence date: 2020-04-17
sequence: sequence
division: CON
label: NC_031795.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA312399
dblink: SAMN03083587
keyword: WGS
keyword: RefSeq
source: Parus major (Great Tit)
organism: Parus major
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Paridae; Parus.
reference: 1
references: 26805030
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM003736.1.\nOn Nov 14, 2016 this sequence version replaced NC_029295.1.\nAssembly name: Parus_major1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Animal Breeding and Genomics\nCentre, Wageningen University on 2016/06/30. The original\nwhole-genome shotgun project has the accession JRXK00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Animal Breeding and Genomics Centre,\n Wageningen University\nAssembly Date :: MAY-2013\nAssembly Method :: AllPaths v. April-2013\nAssembly Name :: Parus_major1.0.3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 95.0x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Parus major Annotation Release 102\nAnnotation Version :: 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 6596997
topology: linear
so has quality: SO_0000987
location: 1..6596997
location: region:1-6596997:1
RO_0002162: 9157

NC_031795
type: RefSeq
SIO_000068: refseq

PRJNA312399
type: BioProject
SIO_000068: bioproject

SAMN03083587
type: BioSample
SIO_000068: biosample

1
title: Evolutionary signals of selection on cognition from the great tit genome and methylome
author: Laine, V.N.
author: Gossmann, T.I.
author: Schachtschneider, K.M.
author: Garroway, C.J.
author: Madsen, O.
author: Verhoeven, K.J.
author: de Jager, V.
author: Megens, H.J.
author: Warren, W.C.
author: Minx, P.
author: Crooijmans, R.P.
author: Corcoran, P.
author: Sheldon, B.C.
author: Slate, J.
author: Zeng, K.
author: van Oers, K.
author: Visser, M.E.
author: Groenen, M.A.
journal: Nat Commun 7, 10474 (2016)
pubmed: 26805030

26805030
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6596997:1
position: 6596997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-6596997:1:source
so part of: sequence
organism: Parus major
mol type: genomic DNA
isolate: Abel
chromosome: 26
sex: male
tissue type: blood
dev stage: 4 year old

9157
type: Taxonomy
SIO_000068: taxonomy

LOC107214961
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107214961
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10685..23817)
location: region:10685-23817:-1
so has part: feature:10685-23817:-1:exon
subclass of: SO_0000010

107214961
type: Gene
SIO_000068: ncbigene

position:10685:-1
position: 10685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23817:-1
position: 23817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10685-23817:-1:exon

LOC107214961
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107214961
product: geranylgeranyl transferase type-2 subunit beta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_015650807.3
SIO_010081: LOC107214961
subclass of: SO_0000673
so part of: LOC107214961
location: complement(join(10685..11709,13681..13830,14602..14727,17845..17955,18080..18132,19624..19729,21953..22150,23140..23247,23730..23817))
location: region:10685-23817:-1
so has part: feature:23730-23817:-1:exon
so has part: feature:23140-23247:-1:exon
so has part: feature:21953-22150:-1:exon
so has part: feature:19624-19729:-1:exon
so has part: feature:18080-18132:-1:exon
so has part: feature:17845-17955:-1:exon
so has part: feature:14602-14727:-1:exon
so has part: feature:13681-13830:-1:exon
so has part: feature:10685-11709:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23730-23817:-1:exon

position:23730:-1
position: 23730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:23140-23247:-1:exon

position:23140:-1
position: 23140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23247:-1
position: 23247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:21953-22150:-1:exon

position:21953:-1
position: 21953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22150:-1
position: 22150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:19624-19729:-1:exon

position:19624:-1
position: 19624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19729:-1
position: 19729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:18080-18132:-1:exon

position:18080:-1
position: 18080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18132:-1
position: 18132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:17845-17955:-1:exon

position:17845:-1
position: 17845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17955:-1
position: 17955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:14602-14727:-1:exon

position:14602:-1
position: 14602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14727:-1
position: 14727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:13681-13830:-1:exon

position:13681:-1
position: 13681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13830:-1
position: 13830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:10685-11709:-1:exon

position:11709:-1
position: 11709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107214961
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107214961
product: geranylgeranyl transferase type-2 subunit beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_015650808.3
SIO_010081: LOC107214961
subclass of: SO_0000673
so part of: LOC107214961
location: complement(join(10685..11709,13681..13830,14602..14727,17845..17955,18080..18132,19624..19729,21953..22150,23140..23247,23629..23697))
location: region:10685-23697:-1
so has part: feature:23629-23697:-1:exon
so has part: feature:23140-23247:-1:exon
so has part: feature:21953-22150:-1:exon
so has part: feature:19624-19729:-1:exon
so has part: feature:18080-18132:-1:exon
so has part: feature:17845-17955:-1:exon
so has part: feature:14602-14727:-1:exon
so has part: feature:13681-13830:-1:exon
so has part: feature:10685-11709:-1:exon

position:23697:-1
position: 23697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23629-23697:-1:exon

position:23629:-1
position: 23629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:23140-23247:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:21953-22150:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:19624-19729:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:18080-18132:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17845-17955:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14602-14727:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13681-13830:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10685-11709:-1:exon

LOC107214961
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107214961
product: geranylgeranyl transferase type-2 subunit beta, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_015650809.3
SIO_010081: LOC107214961
subclass of: SO_0000673
so part of: LOC107214961
location: complement(join(10685..11709,13681..13830,14602..14727,17845..17955,18080..18132,19624..19729,21953..22150,23140..23247,23489..23513))
location: region:10685-23513:-1
so has part: feature:23489-23513:-1:exon
so has part: feature:23140-23247:-1:exon
so has part: feature:21953-22150:-1:exon
so has part: feature:19624-19729:-1:exon
so has part: feature:18080-18132:-1:exon
so has part: feature:17845-17955:-1:exon
so has part: feature:14602-14727:-1:exon
so has part: feature:13681-13830:-1:exon
so has part: feature:10685-11709:-1:exon

position:23513:-1
position: 23513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23489-23513:-1:exon

position:23489:-1
position: 23489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:23140-23247:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:21953-22150:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:19624-19729:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:18080-18132:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17845-17955:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14602-14727:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13681-13830:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10685-11709:-1:exon

LOC107214961
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107214961
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: geranylgeranyl transferase type-2 subunit beta isoform X1
translation: MGTPQKDVIIKPDAPSTLLSEKHADYIASYGTKKDDYEYCMSEYLRMSGVYWGLTAMDLMGQLHRMNKEEILSFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSLHVVDVNKIIEYIQSLQKEDGSFAGDEWGEIDTRFSFCAAATLALLGKLDAIDVGKAVEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITDQLHQVNVDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKMIGRIQWIDREKLRCFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIKAVNPVFCMPEDVLRRINVQPELVS
SIO_010081: LOC107214961
subclass of: SO_0000673
so part of: LOC107214961
location: complement(join(11569..11709,13681..13830,14602..14727,17845..17955,18080..18132,19624..19729,21953..22150,23140..23247,23730..23732))
location: region:11569-23732:-1
so has part: feature:23730-23732:-1:exon
so has part: feature:23140-23247:-1:exon
so has part: feature:21953-22150:-1:exon
so has part: feature:19624-19729:-1:exon
so has part: feature:18080-18132:-1:exon
so has part: feature:17845-17955:-1:exon
so has part: feature:14602-14727:-1:exon
so has part: feature:13681-13830:-1:exon
so has part: feature:11569-11709:-1:exon

XP_015506293.1
type: Protein
SIO_000068: ncbiprotein

position:11569:-1
position: 11569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23732:-1
position: 23732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23730-23732:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:23140-23247:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:21953-22150:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:19624-19729:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:18080-18132:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17845-17955:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14602-14727:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:13681-13830:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11569-11709:-1:exon

LOC107214961
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107214961
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: geranylgeranyl transferase type-2 subunit beta isoform X2
translation: MSEYLRMSGVYWGLTAMDLMGQLHRMNKEEILSFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSLHVVDVNKIIEYIQSLQKEDGSFAGDEWGEIDTRFSFCAAATLALLGKLDAIDVGKAVEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITDQLHQVNVDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKMIGRIQWIDREKLRCFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIKAVNPVFCMPEDVLRRINVQPELVS
SIO_010081: LOC107214961
subclass of: SO_0000673
so part of: LOC107214961
location: complement(join(11569..11709,13681..13830,14602..14727,17845..17955,18080..18132,19624..19729,21953..22141))
location: region:11569-22141:-1
so has part: feature:21953-22141:-1:exon
so has part: feature:19624-19729:-1:exon
so has part: feature:18080-18132:-1:exon
so has part: feature:17845-17955:-1:exon
so has part: feature:14602-14727:-1:exon
so has part: feature:13681-13830:-1:exon
so has part: feature:11569-11709:-1:exon

XP_015506294.1
type: Protein
SIO_000068: ncbiprotein

position:22141:-1
position: 22141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21953-22141:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19624-19729:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18080-18132:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17845-17955:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14602-14727:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13681-13830:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11569-11709:-1:exon

LOC107214961
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107214961
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: geranylgeranyl transferase type-2 subunit beta isoform X2
translation: MSEYLRMSGVYWGLTAMDLMGQLHRMNKEEILSFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSLHVVDVNKIIEYIQSLQKEDGSFAGDEWGEIDTRFSFCAAATLALLGKLDAIDVGKAVEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITDQLHQVNVDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKMIGRIQWIDREKLRCFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIKAVNPVFCMPEDVLRRINVQPELVS
SIO_010081: LOC107214961
subclass of: SO_0000673
so part of: LOC107214961
location: complement(join(11569..11709,13681..13830,14602..14727,17845..17955,18080..18132,19624..19729,21953..22141))
location: region:11569-22141:-1
so has part: feature:21953-22141:-1:exon
so has part: feature:19624-19729:-1:exon
so has part: feature:18080-18132:-1:exon
so has part: feature:17845-17955:-1:exon
so has part: feature:14602-14727:-1:exon
so has part: feature:13681-13830:-1:exon
so has part: feature:11569-11709:-1:exon

XP_015506295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21953-22141:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19624-19729:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18080-18132:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17845-17955:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14602-14727:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13681-13830:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11569-11709:-1:exon

LOC117245549
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC117245549
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(22902..22984)
location: region:22902-22984:-1
so has part: feature:22902-22984:-1:exon
subclass of: SO_0000578

117245549
type: Gene
SIO_000068: ncbigene

position:22902:-1
position: 22902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22984:-1
position: 22984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22902-22984:-1:exon

LOC117245549
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: snoRNA
gene: LOC117245549
product: small nucleolar RNA SNORD45
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00279
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004500315.1
SIO_010081: LOC117245549
subclass of: SO_0000673
so part of: LOC117245549
location: complement(22902..22984)
location: region:22902-22984:-1
so has part: feature:22902-22984:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22902-22984:-1:exon

LOC107214963
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107214963
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(24850..29476)
location: region:24850-29476:-1
so has part: feature:24850-29476:-1:exon
subclass of: SO_0000011

107214963
type: Gene
SIO_000068: ncbigene

position:24850:-1
position: 24850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29476:-1
position: 29476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24850-29476:-1:exon

LOC107214963
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC107214963
product: uncharacterized LOC107214963
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
transcript id: XR_001525068.2
SIO_010081: LOC107214963
subclass of: SO_0000673
so part of: LOC107214963
location: complement(join(24850..24881,25926..29476))
location: region:24850-29476:-1
so has part: feature:25926-29476:-1:exon
so has part: feature:24850-24881:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25926-29476:-1:exon

position:25926:-1
position: 25926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:24850-24881:-1:exon

position:24881:-1
position: 24881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107214748
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107214748
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(34590..40310)
location: region:34590-40310:-1
so has part: feature:34590-40310:-1:exon
subclass of: SO_0000010

107214748
type: Gene
SIO_000068: ncbigene

position:34590:-1
position: 34590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40310:-1
position: 40310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34590-40310:-1:exon

LOC107214748
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107214748
product: copine-5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033519917.1
SIO_010081: LOC107214748
subclass of: SO_0000673
so part of: LOC107214748
location: complement(join(34590..34812,34880..35025,35592..35773,36460..36506,37230..37291,37372..37425,38096..38171,38468..38509,39530..39634,39843..39946,40169..40310))
location: region:34590-40310:-1
so has part: feature:40169-40310:-1:exon
so has part: feature:39843-39946:-1:exon
so has part: feature:39530-39634:-1:exon
so has part: feature:38468-38509:-1:exon
so has part: feature:38096-38171:-1:exon
so has part: feature:37372-37425:-1:exon
so has part: feature:37230-37291:-1:exon
so has part: feature:36460-36506:-1:exon
so has part: feature:35592-35773:-1:exon
so has part: feature:34880-35025:-1:exon
so has part: feature:34590-34812:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40169-40310:-1:exon

position:40169:-1
position: 40169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:39843-39946:-1:exon

position:39843:-1
position: 39843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39946:-1
position: 39946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:39530-39634:-1:exon

position:39530:-1
position: 39530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39634:-1
position: 39634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:38468-38509:-1:exon

position:38468:-1
position: 38468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38509:-1
position: 38509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:38096-38171:-1:exon

position:38096:-1
position: 38096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38171:-1
position: 38171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:37372-37425:-1:exon

position:37372:-1
position: 37372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37425:-1
position: 37425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:37230-37291:-1:exon

position:37230:-1
position: 37230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37291:-1
position: 37291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:36460-36506:-1:exon

position:36460:-1
position: 36460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36506:-1
position: 36506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:35592-35773:-1:exon

position:35592:-1
position: 35592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35773:-1
position: 35773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:34880-35025:-1:exon

position:34880:-1
position: 34880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35025:-1
position: 35025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:34590-34812:-1:exon

position:34812:-1
position: 34812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107214748
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107214748
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: copine-5-like
translation: MCAPAMLTSHPSSDILGKKCGTIILLAEELGNCRDVATLQFCANKLDKKDFFGKSDPFMVFYRSNEDGTFTICHKTEVVRNTLNPVWAAFAIPVRALCNGDHDRAIKVEVYDWDRDGSHDFIGEFTTSYRELARGQSHFNVYEVVNPRKKMKKKKYLNSGTVTLLSFTVEAEHTFLDYIRGGTQLNFTVAIDFTASNGNPSQPTSLHYLSPFQLNAYSLALRAVGDIIQDYDSDKMFPALGFGAKVPPDGHVSHEFPLGLSHCQNGDASNPACCGIAGVLEAYQRSLRRVQLYGPTNFAPVVNHVARSAAMVLDGSQYFVLLIITDGVISDMAQTKEAIVNVRPSWWHWGKWWRPWVLGVGNLGPLGDGGSGEGLRPLRG
SIO_010081: LOC107214748
subclass of: SO_0000673
so part of: LOC107214748
location: complement(join(34590..34812,34880..35025,35592..35773,36460..36506,37230..37291,37372..37425,38096..38171,38468..38509,39530..39634,39843..39946,40169..40270))
location: region:34590-40270:-1
so has part: feature:40169-40270:-1:exon
so has part: feature:39843-39946:-1:exon
so has part: feature:39530-39634:-1:exon
so has part: feature:38468-38509:-1:exon
so has part: feature:38096-38171:-1:exon
so has part: feature:37372-37425:-1:exon
so has part: feature:37230-37291:-1:exon
so has part: feature:36460-36506:-1:exon
so has part: feature:35592-35773:-1:exon
so has part: feature:34880-35025:-1:exon
so has part: feature:34590-34812:-1:exon

XP_033375808.1
type: Protein
SIO_000068: ncbiprotein

position:40270:-1
position: 40270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40169-40270:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:39843-39946:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:39530-39634:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:38468-38509:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:38096-38171:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:37372-37425:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:37230-37291:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:36460-36506:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:35592-35773:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:34880-35025:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:34590-34812:-1:exon

LOC117245538
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC117245538
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(41470..45912)
location: region:41470-45912:-1
so has part: feature:41470-45912:-1:exon
subclass of: SO_0000010

117245538
type: Gene
SIO_000068: ncbigene

position:41470:-1
position: 41470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45912:-1
position: 45912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41470-45912:-1:exon

LOC117245538
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC117245538
product: copine-5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033519930.1
SIO_010081: LOC117245538
subclass of: SO_0000673
so part of: LOC117245538
location: complement(join(41470..41550,41634..41673,42023..42126,43382..43428,44015..44055,45314..45912))
location: region:41470-45912:-1
so has part: feature:45314-45912:-1:exon
so has part: feature:44015-44055:-1:exon
so has part: feature:43382-43428:-1:exon
so has part: feature:42023-42126:-1:exon
so has part: feature:41634-41673:-1:exon
so has part: feature:41470-41550:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:45314-45912:-1:exon

position:45314:-1
position: 45314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:44015-44055:-1:exon

position:44015:-1
position: 44015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44055:-1
position: 44055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:43382-43428:-1:exon

position:43382:-1
position: 43382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43428:-1
position: 43428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:42023-42126:-1:exon

position:42023:-1
position: 42023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42126:-1
position: 42126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:41634-41673:-1:exon

position:41634:-1
position: 41634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41673:-1
position: 41673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:41470-41550:-1:exon

position:41550:-1
position: 41550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117245538
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC117245538
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: copine-5-like
translation: MAGLSSPEPSTGPGPVPATRVELTVSCRQLLDRDTFSKSDPLCVLYTQRPGSHQWREFGRTEVIDNSLNPDFLHKFVLDYCFEERQNLRFDLYDVDSKSPDLSKHDFLGQAFCTLGEIVGSAGSRLEKPLT
SIO_010081: LOC117245538
subclass of: SO_0000673
so part of: LOC117245538
location: complement(join(41470..41550,41634..41673,42023..42126,43382..43428,44015..44055,45314..45396))
location: region:41470-45396:-1
so has part: feature:45314-45396:-1:exon
so has part: feature:44015-44055:-1:exon
so has part: feature:43382-43428:-1:exon
so has part: feature:42023-42126:-1:exon
so has part: feature:41634-41673:-1:exon
so has part: feature:41470-41550:-1:exon

XP_033375821.1
type: Protein
SIO_000068: ncbiprotein

position:45396:-1
position: 45396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45314-45396:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:44015-44055:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:43382-43428:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:42023-42126:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:41634-41673:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:41470-41550:-1:exon

PPIL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: PPIL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(47453..50340)
location: region:47453-50340:-1
so has part: feature:47453-50340:-1:exon
subclass of: SO_0000010

107214928
type: Gene
SIO_000068: ncbigene

position:47453:-1
position: 47453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50340:-1
position: 50340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47453-50340:-1:exon

PPIL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PPIL1
product: peptidylprolyl isomerase like 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_015650747.2
SIO_010081: PPIL1
subclass of: SO_0000673
so part of: PPIL1
location: complement(join(47453..47735,48710..48778,48858..49012,50209..50340))
location: region:47453-50340:-1
so has part: feature:50209-50340:-1:exon
so has part: feature:48858-49012:-1:exon
so has part: feature:48710-48778:-1:exon
so has part: feature:47453-47735:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:50209-50340:-1:exon

position:50209:-1
position: 50209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:48858-49012:-1:exon

position:48858:-1
position: 48858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49012:-1
position: 49012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:48710-48778:-1:exon

position:48710:-1
position: 48710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48778:-1
position: 48778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:47453-47735:-1:exon

position:47735:-1
position: 47735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPIL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PPIL1
product: peptidylprolyl isomerase like 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_015650748.2
SIO_010081: PPIL1
subclass of: SO_0000673
so part of: PPIL1
location: complement(join(47453..47735,48710..48778,48858..49012,50125..50184))
location: region:47453-50184:-1
so has part: feature:50125-50184:-1:exon
so has part: feature:48858-49012:-1:exon
so has part: feature:48710-48778:-1:exon
so has part: feature:47453-47735:-1:exon

position:50184:-1
position: 50184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50125-50184:-1:exon

position:50125:-1
position: 50125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:48858-49012:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48710-48778:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:47453-47735:-1:exon

PPIL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PPIL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase-like 1 isoform X1
translation: MAAVPPDSWQPSTVSMETTMGPLVLELYWQHAPRTCKNFAELSRRGYYNGTKFHRIIKDFMVQGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFLTLGPAQWLDGKHSIFGRVCQGMGVLGRLAMVETNSQDRPLDDVKIIKAYPSG
SIO_010081: PPIL1
subclass of: SO_0000673
so part of: PPIL1
location: complement(join(47515..47735,48710..48778,48858..49012,50209..50264))
location: region:47515-50264:-1
so has part: feature:50209-50264:-1:exon
so has part: feature:48858-49012:-1:exon
so has part: feature:48710-48778:-1:exon
so has part: feature:47515-47735:-1:exon

XP_015506233.1
type: Protein
SIO_000068: ncbiprotein

position:47515:-1
position: 47515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50264:-1
position: 50264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50209-50264:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:48858-49012:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48710-48778:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:47515-47735:-1:exon

PPIL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PPIL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase-like 1 isoform X2
translation: MGPLVLELYWQHAPRTCKNFAELSRRGYYNGTKFHRIIKDFMVQGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFLTLGPAQWLDGKHSIFGRVCQGMGVLGRLAMVETNSQDRPLDDVKIIKAYPSG
SIO_010081: PPIL1
subclass of: SO_0000673
so part of: PPIL1
location: complement(join(47515..47735,48710..48778,48858..49011))
location: region:47515-49011:-1
so has part: feature:48858-49011:-1:exon
so has part: feature:48710-48778:-1:exon
so has part: feature:47515-47735:-1:exon

XP_015506234.1
type: Protein
SIO_000068: ncbiprotein

position:49011:-1
position: 49011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48858-49011:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:48710-48778:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47515-47735:-1:exon

PSRC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: PSRC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 50494..53956
location: region:50494-53956:1
so has part: feature:50494-53956:1:exon
subclass of: SO_0000010

107214927
type: Gene
SIO_000068: ncbigene

position:50494:1
position: 50494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53956:1
position: 53956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50494-53956:1:exon

PSRC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PSRC1
product: proline and serine rich coiled-coil 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_015650743.1
SIO_010081: PSRC1
subclass of: SO_0000673
so part of: PSRC1
location: join(50494..50548,51608..51645,51732..51789,52191..52542,52731..52887,52966..53136,53223..53956)
location: region:50494-53956:1
so has part: feature:50494-50548:1:exon
so has part: feature:51608-51645:1:exon
so has part: feature:51732-51789:1:exon
so has part: feature:52191-52542:1:exon
so has part: feature:52731-52887:1:exon
so has part: feature:52966-53136:1:exon
so has part: feature:53223-53956:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:50494-50548:1:exon

position:50548:1
position: 50548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:51608-51645:1:exon

position:51608:1
position: 51608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51645:1
position: 51645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:51732-51789:1:exon

position:51732:1
position: 51732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51789:1
position: 51789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:52191-52542:1:exon

position:52191:1
position: 52191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52542:1
position: 52542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:52731-52887:1:exon

position:52731:1
position: 52731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52887:1
position: 52887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:52966-53136:1:exon

position:52966:1
position: 52966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53136:1
position: 53136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:53223-53956:1:exon

position:53223:1
position: 53223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSRC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PSRC1
product: proline and serine rich coiled-coil 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033519890.1
SIO_010081: PSRC1
subclass of: SO_0000673
so part of: PSRC1
location: join(50494..50548,51608..51645,51732..51789,52191..52542,52966..53136,53223..53956)
location: region:50494-53956:1
so has part: feature:50494-50548:1:exon
so has part: feature:51608-51645:1:exon
so has part: feature:51732-51789:1:exon
so has part: feature:52191-52542:1:exon
so has part: feature:52966-53136:1:exon
so has part: feature:53223-53956:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:50494-50548:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:51608-51645:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:51732-51789:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:52191-52542:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:52966-53136:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:53223-53956:1:exon

PSRC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PSRC1
product: proline and serine rich coiled-coil 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_015650744.1
SIO_010081: PSRC1
subclass of: SO_0000673
so part of: PSRC1
location: join(50514..50553,51608..51645,51732..51789,52191..52542,52731..52887,52966..53136,53223..53956)
location: region:50514-53956:1
so has part: feature:50514-50553:1:exon
so has part: feature:51608-51645:1:exon
so has part: feature:51732-51789:1:exon
so has part: feature:52191-52542:1:exon
so has part: feature:52731-52887:1:exon
so has part: feature:52966-53136:1:exon
so has part: feature:53223-53956:1:exon

position:50514:1
position: 50514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50514-50553:1:exon

position:50553:1
position: 50553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:51608-51645:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:51732-51789:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:52191-52542:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:52731-52887:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:52966-53136:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:53223-53956:1:exon

PSRC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PSRC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline/serine-rich coiled-coil protein 1 isoform X1
translation: MADDRDVRFVTEESFDFGVLSPSDSQEEEEDEDSPGGGCRHKGGNGRWSPLHGARLEEMVREATRLAAQLEGCHLPPPAPGDPPGPAATPPGTPRSPRRQTFVVKDSPVRALLPTVESQGPAPIPRVPAKPPGASAATSVPEAPPSRNSTAAVKGPSGARGLPTSHVGPSRPCPPQGQWAGARGRSEPPRGGTAGQPKARRGTVPCPPSSRQPHARTTTASVPSGCSPAPTALPKVSPRTPAVGGRTPTPRGVGAARAAPPTTASGCKPGPPPARLRPPRKTAVSSTPR
SIO_010081: PSRC1
subclass of: SO_0000673
so part of: PSRC1
location: join(51630..51645,51732..51789,52191..52542,52731..52887,52966..53136,53223..53338)
location: region:51630-53338:1
so has part: feature:51630-51645:1:exon
so has part: feature:51732-51789:1:exon
so has part: feature:52191-52542:1:exon
so has part: feature:52731-52887:1:exon
so has part: feature:52966-53136:1:exon
so has part: feature:53223-53338:1:exon

XP_015506229.1
type: Protein
SIO_000068: ncbiprotein

position:51630:1
position: 51630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53338:1
position: 53338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51630-51645:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:51732-51789:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:52191-52542:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:52731-52887:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:52966-53136:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:53223-53338:1:exon

PSRC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PSRC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline/serine-rich coiled-coil protein 1 isoform X1
translation: MADDRDVRFVTEESFDFGVLSPSDSQEEEEDEDSPGGGCRHKGGNGRWSPLHGARLEEMVREATRLAAQLEGCHLPPPAPGDPPGPAATPPGTPRSPRRQTFVVKDSPVRALLPTVESQGPAPIPRVPAKPPGASAATSVPEAPPSRNSTAAVKGPSGARGLPTSHVGPSRPCPPQGQWAGARGRSEPPRGGTAGQPKARRGTVPCPPSSRQPHARTTTASVPSGCSPAPTALPKVSPRTPAVGGRTPTPRGVGAARAAPPTTASGCKPGPPPARLRPPRKTAVSSTPR
SIO_010081: PSRC1
subclass of: SO_0000673
so part of: PSRC1
location: join(51630..51645,51732..51789,52191..52542,52731..52887,52966..53136,53223..53338)
location: region:51630-53338:1
so has part: feature:51630-51645:1:exon
so has part: feature:51732-51789:1:exon
so has part: feature:52191-52542:1:exon
so has part: feature:52731-52887:1:exon
so has part: feature:52966-53136:1:exon
so has part: feature:53223-53338:1:exon

XP_015506230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51630-51645:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:51732-51789:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:52191-52542:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:52731-52887:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:52966-53136:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:53223-53338:1:exon

PSRC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PSRC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline/serine-rich coiled-coil protein 1 isoform X2
translation: MADDRDVRFVTEESFDFGVLSPSDSQEEEEDEDSPGGGCRHKGGNGRWSPLHGARLEEMVREATRLAAQLEGCHLPPPAPGDPPGPAATPPGTPRSPRRQTFVVKDSPVRALLPTVESQGPAPIPRVPAKPPGASAATSVPEVSQRQGGVQSPARPPAASPTPGPPPHLSPLAVPLHPLPSLRCPLGLQQWVGGPPLPEVWGQHGQPPQLLPRGANQDPPLPACGPHARRR
SIO_010081: PSRC1
subclass of: SO_0000673
so part of: PSRC1
location: join(51630..51645,51732..51789,52191..52542,52966..53136,53223..53321)
location: region:51630-53321:1
so has part: feature:51630-51645:1:exon
so has part: feature:51732-51789:1:exon
so has part: feature:52191-52542:1:exon
so has part: feature:52966-53136:1:exon
so has part: feature:53223-53321:1:exon

XP_033375781.1
type: Protein
SIO_000068: ncbiprotein

position:53321:1
position: 53321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51630-51645:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:51732-51789:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:52191-52542:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:52966-53136:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:53223-53321:1:exon

CELSR2
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: CELSR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(53622..84488)
location: region:53622-84488:-1
so has part: feature:53622-84488:-1:exon
subclass of: SO_0000010

107214925
type: Gene
SIO_000068: ncbigene

position:53622:-1
position: 53622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84488:-1
position: 84488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53622-84488:-1:exon

CELSR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: CELSR2
product: cadherin EGF LAG seven-pass G-type receptor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_015650741.3
SIO_010081: CELSR2
subclass of: SO_0000673
so part of: CELSR2
location: complement(join(53622..54198,55593..55821,55892..56098,56491..56634,56725..56819,57353..57483,57566..57682,58170..58296,59045..59121,59193..59305,60324..60498,60988..61188,62234..62360,63367..63552,63917..64145,64610..64753,65751..65934,66595..66804,66884..66978,67700..67801,68571..68754,68978..69098,69473..69614,70365..70539,71970..72083,72193..72378,73006..73172,73634..73759,74704..74867,75307..75464,76101..76189,76574..76689,77315..77537,77999..78646,80727..84488))
location: region:53622-84488:-1
so has part: feature:80727-84488:-1:exon
so has part: feature:77999-78646:-1:exon
so has part: feature:77315-77537:-1:exon
so has part: feature:76574-76689:-1:exon
so has part: feature:76101-76189:-1:exon
so has part: feature:75307-75464:-1:exon
so has part: feature:74704-74867:-1:exon
so has part: feature:73634-73759:-1:exon
so has part: feature:73006-73172:-1:exon
so has part: feature:72193-72378:-1:exon
so has part: feature:71970-72083:-1:exon
so has part: feature:70365-70539:-1:exon
so has part: feature:69473-69614:-1:exon
so has part: feature:68978-69098:-1:exon
so has part: feature:68571-68754:-1:exon
so has part: feature:67700-67801:-1:exon
so has part: feature:66884-66978:-1:exon
so has part: feature:66595-66804:-1:exon
so has part: feature:65751-65934:-1:exon
so has part: feature:64610-64753:-1:exon
so has part: feature:63917-64145:-1:exon
so has part: feature:63367-63552:-1:exon
so has part: feature:62234-62360:-1:exon
so has part: feature:60988-61188:-1:exon
so has part: feature:60324-60498:-1:exon
so has part: feature:59193-59305:-1:exon
so has part: feature:59045-59121:-1:exon
so has part: feature:58170-58296:-1:exon
so has part: feature:57566-57682:-1:exon
so has part: feature:57353-57483:-1:exon
so has part: feature:56725-56819:-1:exon
so has part: feature:56491-56634:-1:exon
so has part: feature:55892-56098:-1:exon
so has part: feature:55593-55821:-1:exon
so has part: feature:53622-54198:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:80727-84488:-1:exon

position:80727:-1
position: 80727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:77999-78646:-1:exon

position:77999:-1
position: 77999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78646:-1
position: 78646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:77315-77537:-1:exon

position:77315:-1
position: 77315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77537:-1
position: 77537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:76574-76689:-1:exon

position:76574:-1
position: 76574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76689:-1
position: 76689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:76101-76189:-1:exon

position:76101:-1
position: 76101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76189:-1
position: 76189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:75307-75464:-1:exon

position:75307:-1
position: 75307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75464:-1
position: 75464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:74704-74867:-1:exon

position:74704:-1
position: 74704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74867:-1
position: 74867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:73634-73759:-1:exon

position:73634:-1
position: 73634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73759:-1
position: 73759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:73006-73172:-1:exon

position:73006:-1
position: 73006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73172:-1
position: 73172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:72193-72378:-1:exon

position:72193:-1
position: 72193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72378:-1
position: 72378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:71970-72083:-1:exon

position:71970:-1
position: 71970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72083:-1
position: 72083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:70365-70539:-1:exon

position:70365:-1
position: 70365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70539:-1
position: 70539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:69473-69614:-1:exon

position:69473:-1
position: 69473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69614:-1
position: 69614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:68978-69098:-1:exon

position:68978:-1
position: 68978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69098:-1
position: 69098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:68571-68754:-1:exon

position:68571:-1
position: 68571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68754:-1
position: 68754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:67700-67801:-1:exon

position:67700:-1
position: 67700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67801:-1
position: 67801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:66884-66978:-1:exon

position:66884:-1
position: 66884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66978:-1
position: 66978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:66595-66804:-1:exon

position:66595:-1
position: 66595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66804:-1
position: 66804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:65751-65934:-1:exon

position:65751:-1
position: 65751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65934:-1
position: 65934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:64610-64753:-1:exon

position:64610:-1
position: 64610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64753:-1
position: 64753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:63917-64145:-1:exon

position:63917:-1
position: 63917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64145:-1
position: 64145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:63367-63552:-1:exon

position:63367:-1
position: 63367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63552:-1
position: 63552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:62234-62360:-1:exon

position:62234:-1
position: 62234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62360:-1
position: 62360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:60988-61188:-1:exon

position:60988:-1
position: 60988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61188:-1
position: 61188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:60324-60498:-1:exon

position:60324:-1
position: 60324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60498:-1
position: 60498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:59193-59305:-1:exon

position:59193:-1
position: 59193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59305:-1
position: 59305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:59045-59121:-1:exon

position:59045:-1
position: 59045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59121:-1
position: 59121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:58170-58296:-1:exon

position:58170:-1
position: 58170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58296:-1
position: 58296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:57566-57682:-1:exon

position:57566:-1
position: 57566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57682:-1
position: 57682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:57353-57483:-1:exon

position:57353:-1
position: 57353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57483:-1
position: 57483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:56725-56819:-1:exon

position:56725:-1
position: 56725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56819:-1
position: 56819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:56491-56634:-1:exon

position:56491:-1
position: 56491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56634:-1
position: 56634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:55892-56098:-1:exon

position:55892:-1
position: 55892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56098:-1
position: 56098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:55593-55821:-1:exon

position:55593:-1
position: 55593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55821:-1
position: 55821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:53622-54198:-1:exon

position:54198:-1
position: 54198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CELSR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: CELSR2
product: cadherin EGF LAG seven-pass G-type receptor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_015650740.3
SIO_010081: CELSR2
subclass of: SO_0000673
so part of: CELSR2
location: complement(join(53622..54422,55593..55821,55892..56098,56491..56634,56725..56819,57353..57483,57566..57682,58170..58296,59045..59121,59193..59305,60324..60498,60988..61188,62234..62360,63367..63552,63917..64145,64610..64753,65751..65934,66595..66804,66884..66978,67700..67801,68571..68754,68978..69098,69473..69614,70365..70539,71970..72083,72193..72378,73006..73172,73634..73759,74704..74867,75307..75464,76101..76189,76574..76689,77315..77537,77999..78646,80727..84488))
location: region:53622-84488:-1
so has part: feature:80727-84488:-1:exon
so has part: feature:77999-78646:-1:exon
so has part: feature:77315-77537:-1:exon
so has part: feature:76574-76689:-1:exon
so has part: feature:76101-76189:-1:exon
so has part: feature:75307-75464:-1:exon
so has part: feature:74704-74867:-1:exon
so has part: feature:73634-73759:-1:exon
so has part: feature:73006-73172:-1:exon
so has part: feature:72193-72378:-1:exon
so has part: feature:71970-72083:-1:exon
so has part: feature:70365-70539:-1:exon
so has part: feature:69473-69614:-1:exon
so has part: feature:68978-69098:-1:exon
so has part: feature:68571-68754:-1:exon
so has part: feature:67700-67801:-1:exon
so has part: feature:66884-66978:-1:exon
so has part: feature:66595-66804:-1:exon
so has part: feature:65751-65934:-1:exon
so has part: feature:64610-64753:-1:exon
so has part: feature:63917-64145:-1:exon
so has part: feature:63367-63552:-1:exon
so has part: feature:62234-62360:-1:exon
so has part: feature:60988-61188:-1:exon
so has part: feature:60324-60498:-1:exon
so has part: feature:59193-59305:-1:exon
so has part: feature:59045-59121:-1:exon
so has part: feature:58170-58296:-1:exon
so has part: feature:57566-57682:-1:exon
so has part: feature:57353-57483:-1:exon
so has part: feature:56725-56819:-1:exon
so has part: feature:56491-56634:-1:exon
so has part: feature:55892-56098:-1:exon
so has part: feature:55593-55821:-1:exon
so has part: feature:53622-54422:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:80727-84488:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:77999-78646:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:77315-77537:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:76574-76689:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:76101-76189:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:75307-75464:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:74704-74867:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:73634-73759:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:73006-73172:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:72193-72378:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:71970-72083:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:70365-70539:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:69473-69614:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:68978-69098:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:68571-68754:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:67700-67801:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:66884-66978:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:66595-66804:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:65751-65934:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:64610-64753:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:63917-64145:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:63367-63552:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:62234-62360:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:60988-61188:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:60324-60498:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:59193-59305:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:59045-59121:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:58170-58296:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:57566-57682:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:57353-57483:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:56725-56819:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:56491-56634:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:55892-56098:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:55593-55821:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:53622-54422:-1:exon

position:54422:-1
position: 54422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CELSR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: CELSR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin EGF LAG seven-pass G-type receptor 2 isoform X2
translation: MGLPPTRRASLPLLPLLLLLPLPAPGPATATATGIGSGIGIGTGTRPSSTLPAPLQVRGGTGDSGGSGGTGDSGGARPTPSTGDSGDSAGPAPAAGSSVGTSPGTGSSSGDSGDGGRGSPGIGGPTGGTVNAGDTWKPAGTRNAGGTAGIRNSRGAGGTQDSGGTRVTGGTGDTGSTHVLRSTRSTGNTGHTGDTDIPVDTRSTGNELRTGSVWGAGSTSVPRSSRNSELPGETVRVSRDPGSTRKVPSDTGSTRDTEHNGETGKTPSNNRNTVDIGHAGNTNIPRETSGTGNVMDTGDVGESQITVAPIPHHRLHRSPNTAPQFQPSSYQATVEENRSAGTLVTQVTAQDPDEGEAGRLHYTMAALFDSRSDALFTVDPVTGAISTAAPLDRESKSTHVFRVTAVDHGTPRRSAMATLTVTVSDTNDHDPAFEQPEYQESVRENLEVGYEVLTVRATDGDTGPNANILYRLLNAGGVNEVFEIDSRSGVIRTRGSVDREVVDAFELLVEATDQGQDPGPRSATATVRIAVEDDNDNAPQFSERRYIAQVPEDVGPNAAVLQVMATDRDKGSNALVHYSIVSGNTRGHFYIDAQTGMLDVVTPLDYEVTKEFTLRIRAQDGGRPPLSNISGLVTIQVLDVNDNAPIFVSTPFQATVLENVPVGYSVIHVQAIDADSGDNGRLVYTLLETGIGFPFTINNSTGWIVVASELDREVVDFYSFRVEAQDQGTPPMASTASVSVTILDVNDNSPEFTQREYSARLNEDAAVGTSVLTVSAVDRDANSIITYQISSGNTRNRFSITSQSGGGLISLALPLDYKLERQYLLTIAASDGTRQDTAQVVVNVTDANTHRPVFQSSHYTISINEDRPVGTTVVVISATDEDTGENARITYLMEDSIPQFSIAAETGAVTTQMELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVSDVNDNAPQFLRHSYQGSIYEDVPTFTSVLQVSATDRDSGLNGRVFYTFQGGDDGDGDFIIESTSGIVRTLRRLDRENVPLYSLRAFAVDKGIPARRTPVEIQVTVLDVNDNPPVFERDEFDIFVEENSPIGLVVARITATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTALADLDYETKAEYIMVVQATSAPLVSRATIHVLLRDTNDNSPQLKNFEILFNNYITSRSSSFPGGVIGRIPAHDPDVSDHLTYAFEQGNELNLVLLDPHSGDLRLSPALDSNRPLEAVMRVSVSDGVHSATAQCILRVTVITDEMLSNSITLRLADMSQERFLSPLLSRFLEGVASVLATPRHRVVLFNIQTDTDVGPARILNVSLSALLPAAVPGASRFFSSEELQERLYLNRSLLAATTAQRVLPFDDNVCLREPCENYMRCVSVLQFDSSAPFLASDTILFRPIHPVTGLRCRCPPGFTGDYCETEIDLCYSSPCGSNGRCRSREGGYTCECHEDFTGEHCELSARVGRCTPGVCRNGGTCLNLLVGGFRCQCPPGHYEKPFCTMSTRSFPPRSFLTFRGLRQRFHFTLGLTFATQERDGLLLYNGRFNERHDFVALEIVDEQLQLTFSAGETTTTVSPFVPGGVSDGQWHRVQLHYYNKPVVGRSGVPQGPSEQKVAVVTVDDCDTAMALRFGLHLGNYSCAAQGTQTGSKKSLDLTGPLLLGGVPTLPESFPIRSRHFVGCMRHLHIDQRPVDMAAFIANNGTLPGCPPKKTLCDTNTCHNGGTCVHEWGGFSCRCPLGFGGKTCQEEMASPQRFVGSSCVAWNGLALPLSLPWPVRIMFRTRHPRGVLLRAGAGGRLTLILQLSEGQVVAGAWQGGARLATLRLPQAKVNDGAWHHVELELRGGSGRNPPTTLLLLTLDYGRHQAVGNVPGELQGLRLRTLSLGGLLGDSGAVAEGFQGCLQGLRVGDHVVTAGTLSLAQAVLVNVEGGCALPDPCDSGPCPPNSYCSDDWDSFSCRCHPGYFGDSCVSACALDPCEPPGTCTRRPGTGPGYA…
SIO_010081: CELSR2
subclass of: SO_0000673
so part of: CELSR2
location: complement(join(54177..54198,55593..55821,55892..56098,56491..56634,56725..56819,57353..57483,57566..57682,58170..58296,59045..59121,59193..59305,60324..60498,60988..61188,62234..62360,63367..63552,63917..64145,64610..64753,65751..65934,66595..66804,66884..66978,67700..67801,68571..68754,68978..69098,69473..69614,70365..70539,71970..72083,72193..72378,73006..73172,73634..73759,74704..74867,75307..75464,76101..76189,76574..76689,77315..77537,77999..78646,80727..84462))
location: region:54177-84462:-1
so has part: feature:80727-84462:-1:exon
so has part: feature:77999-78646:-1:exon
so has part: feature:77315-77537:-1:exon
so has part: feature:76574-76689:-1:exon
so has part: feature:76101-76189:-1:exon
so has part: feature:75307-75464:-1:exon
so has part: feature:74704-74867:-1:exon
so has part: feature:73634-73759:-1:exon
so has part: feature:73006-73172:-1:exon
so has part: feature:72193-72378:-1:exon
so has part: feature:71970-72083:-1:exon
so has part: feature:70365-70539:-1:exon
so has part: feature:69473-69614:-1:exon
so has part: feature:68978-69098:-1:exon
so has part: feature:68571-68754:-1:exon
so has part: feature:67700-67801:-1:exon
so has part: feature:66884-66978:-1:exon
so has part: feature:66595-66804:-1:exon
so has part: feature:65751-65934:-1:exon
so has part: feature:64610-64753:-1:exon
so has part: feature:63917-64145:-1:exon
so has part: feature:63367-63552:-1:exon
so has part: feature:62234-62360:-1:exon
so has part: feature:60988-61188:-1:exon
so has part: feature:60324-60498:-1:exon
so has part: feature:59193-59305:-1:exon
so has part: feature:59045-59121:-1:exon
so has part: feature:58170-58296:-1:exon
so has part: feature:57566-57682:-1:exon
so has part: feature:57353-57483:-1:exon
so has part: feature:56725-56819:-1:exon
so has part: feature:56491-56634:-1:exon
so has part: feature:55892-56098:-1:exon
so has part: feature:55593-55821:-1:exon
so has part: feature:54177-54198:-1:exon

XP_015506227.1
type: Protein
SIO_000068: ncbiprotein

position:54177:-1
position: 54177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84462:-1
position: 84462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80727-84462:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:77999-78646:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:77315-77537:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:76574-76689:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:76101-76189:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:75307-75464:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:74704-74867:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:73634-73759:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:73006-73172:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:72193-72378:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:71970-72083:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:70365-70539:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:69473-69614:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:68978-69098:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:68571-68754:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:67700-67801:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:66884-66978:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:66595-66804:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:65751-65934:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:64610-64753:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:63917-64145:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:63367-63552:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:62234-62360:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:60988-61188:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:60324-60498:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:59193-59305:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:59045-59121:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:58170-58296:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:57566-57682:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:57353-57483:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:56725-56819:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:56491-56634:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:55892-56098:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:55593-55821:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:54177-54198:-1:exon

CELSR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: CELSR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin EGF LAG seven-pass G-type receptor 2 isoform X1
translation: MGLPPTRRASLPLLPLLLLLPLPAPGPATATATGIGSGIGIGTGTRPSSTLPAPLQVRGGTGDSGGSGGTGDSGGARPTPSTGDSGDSAGPAPAAGSSVGTSPGTGSSSGDSGDGGRGSPGIGGPTGGTVNAGDTWKPAGTRNAGGTAGIRNSRGAGGTQDSGGTRVTGGTGDTGSTHVLRSTRSTGNTGHTGDTDIPVDTRSTGNELRTGSVWGAGSTSVPRSSRNSELPGETVRVSRDPGSTRKVPSDTGSTRDTEHNGETGKTPSNNRNTVDIGHAGNTNIPRETSGTGNVMDTGDVGESQITVAPIPHHRLHRSPNTAPQFQPSSYQATVEENRSAGTLVTQVTAQDPDEGEAGRLHYTMAALFDSRSDALFTVDPVTGAISTAAPLDRESKSTHVFRVTAVDHGTPRRSAMATLTVTVSDTNDHDPAFEQPEYQESVRENLEVGYEVLTVRATDGDTGPNANILYRLLNAGGVNEVFEIDSRSGVIRTRGSVDREVVDAFELLVEATDQGQDPGPRSATATVRIAVEDDNDNAPQFSERRYIAQVPEDVGPNAAVLQVMATDRDKGSNALVHYSIVSGNTRGHFYIDAQTGMLDVVTPLDYEVTKEFTLRIRAQDGGRPPLSNISGLVTIQVLDVNDNAPIFVSTPFQATVLENVPVGYSVIHVQAIDADSGDNGRLVYTLLETGIGFPFTINNSTGWIVVASELDREVVDFYSFRVEAQDQGTPPMASTASVSVTILDVNDNSPEFTQREYSARLNEDAAVGTSVLTVSAVDRDANSIITYQISSGNTRNRFSITSQSGGGLISLALPLDYKLERQYLLTIAASDGTRQDTAQVVVNVTDANTHRPVFQSSHYTISINEDRPVGTTVVVISATDEDTGENARITYLMEDSIPQFSIAAETGAVTTQMELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVSDVNDNAPQFLRHSYQGSIYEDVPTFTSVLQVSATDRDSGLNGRVFYTFQGGDDGDGDFIIESTSGIVRTLRRLDRENVPLYSLRAFAVDKGIPARRTPVEIQVTVLDVNDNPPVFERDEFDIFVEENSPIGLVVARITATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTALADLDYETKAEYIMVVQATSAPLVSRATIHVLLRDTNDNSPQLKNFEILFNNYITSRSSSFPGGVIGRIPAHDPDVSDHLTYAFEQGNELNLVLLDPHSGDLRLSPALDSNRPLEAVMRVSVSDGVHSATAQCILRVTVITDEMLSNSITLRLADMSQERFLSPLLSRFLEGVASVLATPRHRVVLFNIQTDTDVGPARILNVSLSALLPAAVPGASRFFSSEELQERLYLNRSLLAATTAQRVLPFDDNVCLREPCENYMRCVSVLQFDSSAPFLASDTILFRPIHPVTGLRCRCPPGFTGDYCETEIDLCYSSPCGSNGRCRSREGGYTCECHEDFTGEHCELSARVGRCTPGVCRNGGTCLNLLVGGFRCQCPPGHYEKPFCTMSTRSFPPRSFLTFRGLRQRFHFTLGLTFATQERDGLLLYNGRFNERHDFVALEIVDEQLQLTFSAGETTTTVSPFVPGGVSDGQWHRVQLHYYNKPVVGRSGVPQGPSEQKVAVVTVDDCDTAMALRFGLHLGNYSCAAQGTQTGSKKSLDLTGPLLLGGVPTLPESFPIRSRHFVGCMRHLHIDQRPVDMAAFIANNGTLPGCPPKKTLCDTNTCHNGGTCVHEWGGFSCRCPLGFGGKTCQEEMASPQRFVGSSCVAWNGLALPLSLPWPVRIMFRTRHPRGVLLRAGAGGRLTLILQLSEGQVVAGAWQGGARLATLRLPQAKVNDGAWHHVELELRGGSGRNPPTTLLLLTLDYGRHQAVGNVPGELQGLRLRTLSLGGLLGDSGAVAEGFQGCLQGLRVGDHVVTAGTLSLAQAVLVNVEGGCALPDPCDSGPCPPNSYCSDDWDSFSCRCHPGYFGDSCVSACALDPCEPPGTCTRRPGTGPGYA…
SIO_010081: CELSR2
subclass of: SO_0000673
so part of: CELSR2
location: complement(join(54395..54422,55593..55821,55892..56098,56491..56634,56725..56819,57353..57483,57566..57682,58170..58296,59045..59121,59193..59305,60324..60498,60988..61188,62234..62360,63367..63552,63917..64145,64610..64753,65751..65934,66595..66804,66884..66978,67700..67801,68571..68754,68978..69098,69473..69614,70365..70539,71970..72083,72193..72378,73006..73172,73634..73759,74704..74867,75307..75464,76101..76189,76574..76689,77315..77537,77999..78646,80727..84462))
location: region:54395-84462:-1
so has part: feature:80727-84462:-1:exon
so has part: feature:77999-78646:-1:exon
so has part: feature:77315-77537:-1:exon
so has part: feature:76574-76689:-1:exon
so has part: feature:76101-76189:-1:exon
so has part: feature:75307-75464:-1:exon
so has part: feature:74704-74867:-1:exon
so has part: feature:73634-73759:-1:exon
so has part: feature:73006-73172:-1:exon
so has part: feature:72193-72378:-1:exon
so has part: feature:71970-72083:-1:exon
so has part: feature:70365-70539:-1:exon
so has part: feature:69473-69614:-1:exon
so has part: feature:68978-69098:-1:exon
so has part: feature:68571-68754:-1:exon
so has part: feature:67700-67801:-1:exon
so has part: feature:66884-66978:-1:exon
so has part: feature:66595-66804:-1:exon
so has part: feature:65751-65934:-1:exon
so has part: feature:64610-64753:-1:exon
so has part: feature:63917-64145:-1:exon
so has part: feature:63367-63552:-1:exon
so has part: feature:62234-62360:-1:exon
so has part: feature:60988-61188:-1:exon
so has part: feature:60324-60498:-1:exon
so has part: feature:59193-59305:-1:exon
so has part: feature:59045-59121:-1:exon
so has part: feature:58170-58296:-1:exon
so has part: feature:57566-57682:-1:exon
so has part: feature:57353-57483:-1:exon
so has part: feature:56725-56819:-1:exon
so has part: feature:56491-56634:-1:exon
so has part: feature:55892-56098:-1:exon
so has part: feature:55593-55821:-1:exon
so has part: feature:54395-54422:-1:exon

XP_015506226.1
type: Protein
SIO_000068: ncbiprotein

position:54395:-1
position: 54395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80727-84462:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:77999-78646:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:77315-77537:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:76574-76689:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:76101-76189:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:75307-75464:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:74704-74867:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:73634-73759:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:73006-73172:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:72193-72378:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:71970-72083:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:70365-70539:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:69473-69614:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:68978-69098:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:68571-68754:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:67700-67801:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:66884-66978:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:66595-66804:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:65751-65934:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:64610-64753:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:63917-64145:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:63367-63552:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:62234-62360:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:60988-61188:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:60324-60498:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:59193-59305:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:59045-59121:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:58170-58296:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:57566-57682:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:57353-57483:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:56725-56819:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:56491-56634:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:55892-56098:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:55593-55821:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:54395-54422:-1:exon

SARS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: SARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(85770..93692)
location: region:85770-93692:-1
so has part: feature:85770-93692:-1:exon
subclass of: SO_0000010

107215021
type: Gene
SIO_000068: ncbigene

position:85770:-1
position: 85770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93692:-1
position: 93692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85770-93692:-1:exon

SARS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: SARS1
product: seryl-tRNA synthetase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
transcript id: XM_015650935.3
SIO_010081: SARS1
subclass of: SO_0000673
so part of: SARS1
location: complement(join(85770..86222,86301..86430,86516..86673,87525..87654,88285..88506,89275..89430,89701..89844,90308..90466,91013..91093,91257..91327,93502..93692))
location: region:85770-93692:-1
so has part: feature:93502-93692:-1:exon
so has part: feature:91257-91327:-1:exon
so has part: feature:91013-91093:-1:exon
so has part: feature:90308-90466:-1:exon
so has part: feature:89701-89844:-1:exon
so has part: feature:89275-89430:-1:exon
so has part: feature:88285-88506:-1:exon
so has part: feature:87525-87654:-1:exon
so has part: feature:86516-86673:-1:exon
so has part: feature:86301-86430:-1:exon
so has part: feature:85770-86222:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:93502-93692:-1:exon

position:93502:-1
position: 93502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:91257-91327:-1:exon

position:91257:-1
position: 91257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91327:-1
position: 91327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:91013-91093:-1:exon

position:91013:-1
position: 91013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91093:-1
position: 91093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:90308-90466:-1:exon

position:90308:-1
position: 90308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90466:-1
position: 90466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:89701-89844:-1:exon

position:89701:-1
position: 89701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89844:-1
position: 89844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:89275-89430:-1:exon

position:89275:-1
position: 89275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89430:-1
position: 89430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:88285-88506:-1:exon

position:88285:-1
position: 88285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88506:-1
position: 88506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:87525-87654:-1:exon

position:87525:-1
position: 87525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87654:-1
position: 87654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:86516-86673:-1:exon

position:86516:-1
position: 86516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86673:-1
position: 86673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:86301-86430:-1:exon

position:86301:-1
position: 86301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86430:-1
position: 86430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:85770-86222:-1:exon

position:86222:-1
position: 86222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SARS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: SARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine--tRNA ligase, cytoplasmic
translation: MVLDLDLFRADKGGDPAMVRDMQRKRFKDPALVDALVRADGAWRRCRFRADNLNKLKNLCSKTIGDKMKKKEPVGTDESVPESAQNLDELTADVLGSLQVSQIKKVRLLIDEAILECDSERLRLEAERFESLREIGNLLHPSVPISNDEDVDNKVERVWGDCSCRKKYSHVDLVVMVDGYEGEKGAVVAGSRGYFLKGPLVFLEQALIQYALQSLRARGYTPVYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSERAEDSSIDEKYLIATSEQPIAALHRDEWLRPEDLPLKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEIFEEMMATAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATMCATTRTICAILENHQTPEGIRIPEKLQNFMPPDLRELIPFIKPAPIDQELSKKQKKQQEGGGKKKAGGGRDQVLEEQMKNMEV
SIO_010081: SARS1
subclass of: SO_0000673
so part of: SARS1
location: complement(join(86068..86222,86301..86430,86516..86673,87525..87654,88285..88506,89275..89430,89701..89844,90308..90466,91013..91093,91257..91327,93502..93637))
location: region:86068-93637:-1
so has part: feature:93502-93637:-1:exon
so has part: feature:91257-91327:-1:exon
so has part: feature:91013-91093:-1:exon
so has part: feature:90308-90466:-1:exon
so has part: feature:89701-89844:-1:exon
so has part: feature:89275-89430:-1:exon
so has part: feature:88285-88506:-1:exon
so has part: feature:87525-87654:-1:exon
so has part: feature:86516-86673:-1:exon
so has part: feature:86301-86430:-1:exon
so has part: feature:86068-86222:-1:exon

XP_015506421.1
type: Protein
SIO_000068: ncbiprotein

position:86068:-1
position: 86068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93637:-1
position: 93637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93502-93637:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91257-91327:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91013-91093:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:90308-90466:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89701-89844:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:89275-89430:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:88285-88506:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:87525-87654:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:86516-86673:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:86301-86430:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:86068-86222:-1:exon

ELAPOR1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: ELAPOR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(94507..106856)
location: region:94507-106856:-1
so has part: feature:94507-106856:-1:exon
subclass of: SO_0000010

107215042
type: Gene
SIO_000068: ncbigene

position:94507:-1
position: 94507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106856:-1
position: 106856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94507-106856:-1:exon

ELAPOR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ELAPOR1
product: endosome-lysosome associated apoptosis and autophagy regulator 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_015650981.3
SIO_010081: ELAPOR1
subclass of: SO_0000673
so part of: ELAPOR1
location: complement(join(94507..94847,95091..95256,95338..95516,95585..95711,96234..96335,96412..96508,96855..97020,97794..97967,98582..98836,98937..99074,99150..99255,99347..99437,99520..99648,100264..100441,100515..100603,100918..101067,101145..101250,101498..101578,102054..102201,103175..103367,104489..104609,106707..106856))
location: region:94507-106856:-1
so has part: feature:106707-106856:-1:exon
so has part: feature:104489-104609:-1:exon
so has part: feature:103175-103367:-1:exon
so has part: feature:102054-102201:-1:exon
so has part: feature:101498-101578:-1:exon
so has part: feature:101145-101250:-1:exon
so has part: feature:100918-101067:-1:exon
so has part: feature:100515-100603:-1:exon
so has part: feature:100264-100441:-1:exon
so has part: feature:99520-99648:-1:exon
so has part: feature:99347-99437:-1:exon
so has part: feature:99150-99255:-1:exon
so has part: feature:98937-99074:-1:exon
so has part: feature:98582-98836:-1:exon
so has part: feature:97794-97967:-1:exon
so has part: feature:96855-97020:-1:exon
so has part: feature:96412-96508:-1:exon
so has part: feature:96234-96335:-1:exon
so has part: feature:95585-95711:-1:exon
so has part: feature:95338-95516:-1:exon
so has part: feature:95091-95256:-1:exon
so has part: feature:94507-94847:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:106707-106856:-1:exon

position:106707:-1
position: 106707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:104489-104609:-1:exon

position:104489:-1
position: 104489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104609:-1
position: 104609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:103175-103367:-1:exon

position:103175:-1
position: 103175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103367:-1
position: 103367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:102054-102201:-1:exon

position:102054:-1
position: 102054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102201:-1
position: 102201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:101498-101578:-1:exon

position:101498:-1
position: 101498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101578:-1
position: 101578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:101145-101250:-1:exon

position:101145:-1
position: 101145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101250:-1
position: 101250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:100918-101067:-1:exon

position:100918:-1
position: 100918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101067:-1
position: 101067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:100515-100603:-1:exon

position:100515:-1
position: 100515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100603:-1
position: 100603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:100264-100441:-1:exon

position:100264:-1
position: 100264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100441:-1
position: 100441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:99520-99648:-1:exon

position:99520:-1
position: 99520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99648:-1
position: 99648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:99347-99437:-1:exon

position:99347:-1
position: 99347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99437:-1
position: 99437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:99150-99255:-1:exon

position:99150:-1
position: 99150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99255:-1
position: 99255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:98937-99074:-1:exon

position:98937:-1
position: 98937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99074:-1
position: 99074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:98582-98836:-1:exon

position:98582:-1
position: 98582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98836:-1
position: 98836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:97794-97967:-1:exon

position:97794:-1
position: 97794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97967:-1
position: 97967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:96855-97020:-1:exon

position:96855:-1
position: 96855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97020:-1
position: 97020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:96412-96508:-1:exon

position:96412:-1
position: 96412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96508:-1
position: 96508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:96234-96335:-1:exon

position:96234:-1
position: 96234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96335:-1
position: 96335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:95585-95711:-1:exon

position:95585:-1
position: 95585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95711:-1
position: 95711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:95338-95516:-1:exon

position:95338:-1
position: 95338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95516:-1
position: 95516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:95091-95256:-1:exon

position:95091:-1
position: 95091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95256:-1
position: 95256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:94507-94847:-1:exon

position:94847:-1
position: 94847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ELAPOR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ELAPOR1
product: endosome-lysosome associated apoptosis and autophagy regulator 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_015650979.3
SIO_010081: ELAPOR1
subclass of: SO_0000673
so part of: ELAPOR1
location: complement(join(94507..94895,95091..95256,95338..95516,95585..95711,96234..96335,96412..96508,96855..97020,97794..97967,98582..98836,98937..99074,99150..99255,99347..99437,99520..99648,100264..100441,100515..100603,100918..101067,101145..101250,101498..101578,102054..102201,103175..103367,104489..104609,106707..106856))
location: region:94507-106856:-1
so has part: feature:106707-106856:-1:exon
so has part: feature:104489-104609:-1:exon
so has part: feature:103175-103367:-1:exon
so has part: feature:102054-102201:-1:exon
so has part: feature:101498-101578:-1:exon
so has part: feature:101145-101250:-1:exon
so has part: feature:100918-101067:-1:exon
so has part: feature:100515-100603:-1:exon
so has part: feature:100264-100441:-1:exon
so has part: feature:99520-99648:-1:exon
so has part: feature:99347-99437:-1:exon
so has part: feature:99150-99255:-1:exon
so has part: feature:98937-99074:-1:exon
so has part: feature:98582-98836:-1:exon
so has part: feature:97794-97967:-1:exon
so has part: feature:96855-97020:-1:exon
so has part: feature:96412-96508:-1:exon
so has part: feature:96234-96335:-1:exon
so has part: feature:95585-95711:-1:exon
so has part: feature:95338-95516:-1:exon
so has part: feature:95091-95256:-1:exon
so has part: feature:94507-94895:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:106707-106856:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104489-104609:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:103175-103367:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:102054-102201:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:101498-101578:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:101145-101250:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:100918-101067:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:100515-100603:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:100264-100441:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:99520-99648:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:99347-99437:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:99150-99255:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:98937-99074:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:98582-98836:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:97794-97967:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:96855-97020:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:96412-96508:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:96234-96335:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:95585-95711:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:95338-95516:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:95091-95256:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:94507-94895:-1:exon

position:94895:-1
position: 94895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ELAPOR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ELAPOR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0577 protein KIAA1324 homolog isoform X2
translation: MAGTGARWMPLALCLAVTVSPGRTGEQLHVCKESEYHYEYTACDSSGSRWRVAVPHTPGLCTGLPDPVRGTECSFSCKAGEFLEMQTQTCRPCAAGTYSLGTGVRFDEWDEVPHGFANVATNLEVDDGFGDAAENCTASTWVPLGDYVASNTDECTATLMYAVSLKQSGTVTFEYIYPDSSIVFEFFVQNDQCQPTTEESRWMRTTEKGWEFHSVELSRGNNVLYWRTTAFSVWSKVPKPVLVRNIGITGVAFTSECFPCKPGTFARAAGSTACQPCPADTFSGKGATACQPCEPDTYAEPGAGSCKPRPPCTDKDFFYTHTACDAGGETQLMYKWAEPKICSEELPQAARLPPSGIKTRCPPCNPGFAKGNGSTCQPCPYGSYSNGSACLSCPEGTEPVLGLEYKWWNVLPPNMETTVLSGINFEYKGIAGWEVAGDYIYTAAGASDSDFMILTLVVPGFSPPSPVLEDTESREVARITFVFETLCSVGCELYFMVGVNSRTNTPVETWTGSTGKQSYTYLVEKNATMSFTWAFQRTPYHEAGRRFTSDVAKLYSINVTNVQGGVASFCRRCAPQPAGSCAPCSPGSAVDLSSGSCQPCPPGTYLQSQPSDGTPTCHPCGPGTRSNQLRSLCYNNCSLALALPGRMLHFEFPSLGMGAGVGTGPSFTPKGLRYSHHFRLSLCGHQGRKMASCADNVTAGRGGPARVVISYVCQAILVPPDITGARAAVSSQPISLGDHLLGVTTSSVLDSIVSPPELFPPGHPDLPDIIFFFRSNDMTQPCSGGRATTIRLRCDPLLLGTGTLAVPSKCPEGTCDGCTFHFLWVTAEGCPRCSSSHHRPIVGACIGGVQKTTYVWREPRLCHGGDALPPQVIQACRSVDFWLKVGISTGTCVAVLLAALAAYFWKKTQKLEYKYSKLVMDAAARESEATSPDSCAIMEGEDAEDELLFATEMSLFGKLKALTAKRMPDGFDSVPLKTSSSSTDREL
SIO_010081: ELAPOR1
subclass of: SO_0000673
so part of: ELAPOR1
location: complement(join(94779..94847,95091..95256,95338..95516,95585..95711,96234..96335,96412..96508,96855..97020,97794..97967,98582..98836,98937..99074,99150..99255,99347..99437,99520..99648,100264..100441,100515..100603,100918..101067,101145..101250,101498..101578,102054..102201,103175..103367,104489..104609,106707..106805))
location: region:94779-106805:-1
so has part: feature:106707-106805:-1:exon
so has part: feature:104489-104609:-1:exon
so has part: feature:103175-103367:-1:exon
so has part: feature:102054-102201:-1:exon
so has part: feature:101498-101578:-1:exon
so has part: feature:101145-101250:-1:exon
so has part: feature:100918-101067:-1:exon
so has part: feature:100515-100603:-1:exon
so has part: feature:100264-100441:-1:exon
so has part: feature:99520-99648:-1:exon
so has part: feature:99347-99437:-1:exon
so has part: feature:99150-99255:-1:exon
so has part: feature:98937-99074:-1:exon
so has part: feature:98582-98836:-1:exon
so has part: feature:97794-97967:-1:exon
so has part: feature:96855-97020:-1:exon
so has part: feature:96412-96508:-1:exon
so has part: feature:96234-96335:-1:exon
so has part: feature:95585-95711:-1:exon
so has part: feature:95338-95516:-1:exon
so has part: feature:95091-95256:-1:exon
so has part: feature:94779-94847:-1:exon

XP_015506467.1
type: Protein
SIO_000068: ncbiprotein

position:94779:-1
position: 94779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106805:-1
position: 106805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106707-106805:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104489-104609:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:103175-103367:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:102054-102201:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:101498-101578:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:101145-101250:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:100918-101067:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:100515-100603:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:100264-100441:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:99520-99648:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:99347-99437:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:99150-99255:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:98937-99074:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:98582-98836:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:97794-97967:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:96855-97020:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:96412-96508:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:96234-96335:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:95585-95711:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:95338-95516:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:95091-95256:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:94779-94847:-1:exon

ELAPOR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ELAPOR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0577 protein KIAA1324 homolog isoform X1
translation: MAGTGARWMPLALCLAVTVSPGRTGEQLHVCKESEYHYEYTACDSSGSRWRVAVPHTPGLCTGLPDPVRGTECSFSCKAGEFLEMQTQTCRPCAAGTYSLGTGVRFDEWDEVPHGFANVATNLEVDDGFGDAAENCTASTWVPLGDYVASNTDECTATLMYAVSLKQSGTVTFEYIYPDSSIVFEFFVQNDQCQPTTEESRWMRTTEKGWEFHSVELSRGNNVLYWRTTAFSVWSKVPKPVLVRNIGITGVAFTSECFPCKPGTFARAAGSTACQPCPADTFSGKGATACQPCEPDTYAEPGAGSCKPRPPCTDKDFFYTHTACDAGGETQLMYKWAEPKICSEELPQAARLPPSGIKTRCPPCNPGFAKGNGSTCQPCPYGSYSNGSACLSCPEGTEPVLGLEYKWWNVLPPNMETTVLSGINFEYKGIAGWEVAGDYIYTAAGASDSDFMILTLVVPGFSPPSPVLEDTESREVARITFVFETLCSVGCELYFMVGVNSRTNTPVETWTGSTGKQSYTYLVEKNATMSFTWAFQRTPYHEAGRRFTSDVAKLYSINVTNVQGGVASFCRRCAPQPAGSCAPCSPGSAVDLSSGSCQPCPPGTYLQSQPSDGTPTCHPCGPGTRSNQLRSLCYNNCSLALALPGRMLHFEFPSLGMGAGVGTGPSFTPKGLRYSHHFRLSLCGHQGRKMASCADNVTAGRGGPARVVISYVCQAILVPPDITGARAAVSSQPISLGDHLLGVTTSSVLDSIVSPPELFPPGHPDLPDIIFFFRSNDMTQPCSGGRATTIRLRCDPLLLGTGTLAVPSKCPEGTCDGCTFHFLWVTAEGCPRCSSSHHRPIVGACIGGVQKTTYVWREPRLCHGGDALPPQVIQACRSVDFWLKVGISTGTCVAVLLAALAAYFWKKTQKLEYKYSKLVMDAAARESEATSPDSCAIMEGEDAEDELLFATEMSLFGKLKALTAKFPHHRRVPGLSFPTPQRMPDGFDSVPLKTSSSSTDREL
SIO_010081: ELAPOR1
subclass of: SO_0000673
so part of: ELAPOR1
location: complement(join(94779..94895,95091..95256,95338..95516,95585..95711,96234..96335,96412..96508,96855..97020,97794..97967,98582..98836,98937..99074,99150..99255,99347..99437,99520..99648,100264..100441,100515..100603,100918..101067,101145..101250,101498..101578,102054..102201,103175..103367,104489..104609,106707..106805))
location: region:94779-106805:-1
so has part: feature:106707-106805:-1:exon
so has part: feature:104489-104609:-1:exon
so has part: feature:103175-103367:-1:exon
so has part: feature:102054-102201:-1:exon
so has part: feature:101498-101578:-1:exon
so has part: feature:101145-101250:-1:exon
so has part: feature:100918-101067:-1:exon
so has part: feature:100515-100603:-1:exon
so has part: feature:100264-100441:-1:exon
so has part: feature:99520-99648:-1:exon
so has part: feature:99347-99437:-1:exon
so has part: feature:99150-99255:-1:exon
so has part: feature:98937-99074:-1:exon
so has part: feature:98582-98836:-1:exon
so has part: feature:97794-97967:-1:exon
so has part: feature:96855-97020:-1:exon
so has part: feature:96412-96508:-1:exon
so has part: feature:96234-96335:-1:exon
so has part: feature:95585-95711:-1:exon
so has part: feature:95338-95516:-1:exon
so has part: feature:95091-95256:-1:exon
so has part: feature:94779-94895:-1:exon

XP_015506465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106707-106805:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104489-104609:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:103175-103367:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:102054-102201:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:101498-101578:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:101145-101250:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:100918-101067:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:100515-100603:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:100264-100441:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:99520-99648:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:99347-99437:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:99150-99255:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:98937-99074:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:98582-98836:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:97794-97967:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:96855-97020:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:96412-96508:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:96234-96335:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:95585-95711:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:95338-95516:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:95091-95256:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:94779-94895:-1:exon

LOC117245550
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC117245550
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(108774..109029)
location: region:108774-109029:-1
so has part: feature:108774-109029:-1:exon
subclass of: SO_0000979

117245550
type: Gene
SIO_000068: ncbigene

position:108774:-1
position: 108774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109029:-1
position: 109029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108774-109029:-1:exon

LOC117245550
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: guide_RNA
gene: LOC117245550
product: small Cajal body-specific RNA 2
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01268
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004500316.1
SIO_010081: LOC117245550
subclass of: SO_0000673
so part of: LOC117245550
location: complement(108774..109029)
location: region:108774-109029:-1
so has part: feature:108774-109029:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:108774-109029:-1:exon

TMEM167B
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: TMEM167B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(110617..112559)
location: region:110617-112559:-1
so has part: feature:110617-112559:-1:exon
subclass of: SO_0000010

107214808
type: Gene
SIO_000068: ncbigene

position:110617:-1
position: 110617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112559:-1
position: 112559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110617-112559:-1:exon

TMEM167B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: TMEM167B
product: transmembrane protein 167B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_015650508.3
SIO_010081: TMEM167B
subclass of: SO_0000673
so part of: TMEM167B
location: complement(join(110617..111442,111780..111911,112458..112559))
location: region:110617-112559:-1
so has part: feature:112458-112559:-1:exon
so has part: feature:111780-111911:-1:exon
so has part: feature:110617-111442:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:112458-112559:-1:exon

position:112458:-1
position: 112458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:111780-111911:-1:exon

position:111780:-1
position: 111780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111911:-1
position: 111911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:110617-111442:-1:exon

position:111442:-1
position: 111442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM167B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: TMEM167B
product: transmembrane protein 167B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_015650506.2
SIO_010081: TMEM167B
subclass of: SO_0000673
so part of: TMEM167B
location: complement(join(110617..111442,111780..111911,112383..112482))
location: region:110617-112482:-1
so has part: feature:112383-112482:-1:exon
so has part: feature:111780-111911:-1:exon
so has part: feature:110617-111442:-1:exon

position:112482:-1
position: 112482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112383-112482:-1:exon

position:112383:-1
position: 112383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:111780-111911:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:110617-111442:-1:exon

TMEM167B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: TMEM167B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein kish-B isoform X2
translation: MTNVYSLDGLLVFGLLLVCTCAYLRKVPRLRTWLLSERRGVWGVCHKAAVIGTRLHVAVSVSCLLMAFYVLVGK
SIO_010081: TMEM167B
subclass of: SO_0000673
so part of: TMEM167B
location: complement(join(111360..111442,111780..111911,112458..112467))
location: region:111360-112467:-1
so has part: feature:112458-112467:-1:exon
so has part: feature:111780-111911:-1:exon
so has part: feature:111360-111442:-1:exon

XP_015505994.1
type: Protein
SIO_000068: ncbiprotein

position:111360:-1
position: 111360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112467:-1
position: 112467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112458-112467:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111780-111911:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:111360-111442:-1:exon

TMEM167B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: TMEM167B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein kish-B isoform X1
translation: MTNGGNGGPEGEGEPRAAWGEPGAGITNVYSLDGLLVFGLLLVCTCAYLRKVPRLRTWLLSERRGVWGVCHKAAVIGTRLHVAVSVSCLLMAFYVLVGK
SIO_010081: TMEM167B
subclass of: SO_0000673
so part of: TMEM167B
location: complement(join(111360..111442,111780..111911,112383..112467))
location: region:111360-112467:-1
so has part: feature:112383-112467:-1:exon
so has part: feature:111780-111911:-1:exon
so has part: feature:111360-111442:-1:exon

XP_015505992.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112383-112467:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111780-111911:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:111360-111442:-1:exon

INAVA
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: INAVA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 116331..123512
location: region:116331-123512:1
so has part: feature:116331-123512:1:exon
subclass of: SO_0000010

107214743
type: Gene
SIO_000068: ncbigene

position:116331:1
position: 116331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123512:1
position: 123512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116331-123512:1:exon

INAVA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: INAVA
product: innate immunity activator
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_015650394.2
SIO_010081: INAVA
subclass of: SO_0000673
so part of: INAVA
location: join(116331..116511,116977..117036,117686..117810,117889..118008,118632..118836,120299..120701,121421..121988,123167..123512)
location: region:116331-123512:1
so has part: feature:116331-116511:1:exon
so has part: feature:116977-117036:1:exon
so has part: feature:117686-117810:1:exon
so has part: feature:117889-118008:1:exon
so has part: feature:118632-118836:1:exon
so has part: feature:120299-120701:1:exon
so has part: feature:121421-121988:1:exon
so has part: feature:123167-123512:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:116331-116511:1:exon

position:116511:1
position: 116511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:116977-117036:1:exon

position:116977:1
position: 116977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117036:1
position: 117036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:117686-117810:1:exon

position:117686:1
position: 117686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117810:1
position: 117810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:117889-118008:1:exon

position:117889:1
position: 117889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118008:1
position: 118008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:118632-118836:1:exon

position:118632:1
position: 118632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118836:1
position: 118836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:120299-120701:1:exon

position:120299:1
position: 120299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120701:1
position: 120701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:121421-121988:1:exon

position:121421:1
position: 121421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121988:1
position: 121988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:123167-123512:1:exon

position:123167:1
position: 123167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

INAVA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: INAVA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: innate immunity activator protein
translation: MGEASDMDSRIMLHSGPDSLMSLPKERVQAGRRQQQVLEAQLDGCIQELRQLCLREAELTGTLPCEYPLKAGEKPPKVRRRVGAAFKLDEIVVLCGVDPLERERALQLQIAEASRRLCREENIGRQVRKRRQTAALREEQKLRDLEQVLSQRRLLAGQQDTSAAKEDREPSEPAAPQRSPSPKDPTEEEEKELGLLMPPPNPWQEASLDRPYERAKNPSISPEDGETQRSQSRLGSLMAAPASSLAPSSPDSAGSSVSRTGGPPYQFVPIRTLVLCQQAGSSAPSTPEPLGRQGQTQSLRVEPCCQPAEPRGRSAASRRRPTYYTVTVPTSCVLTPSPVCRSGSDDSISDLSSISHATSPGSSSPDVSFAVPLPLAKPGYYPRGALQLLPPAGPLTFLYEQDLAPLRYQRLVPSRSRIVRTPSLKDYVPTGARGLSKAAVTEELKSWHQRAQLRGSRPHSLDRQGTFQRAHGGTTRDMPIAHGVLSLVQGPPVQVLRRSVPSLPVQVYMPENGEIVTQV
SIO_010081: INAVA
subclass of: SO_0000673
so part of: INAVA
location: join(116991..117036,117686..117810,117889..118008,118632..118836,120299..120701,121421..121988,123167..123259)
location: region:116991-123259:1
so has part: feature:116991-117036:1:exon
so has part: feature:117686-117810:1:exon
so has part: feature:117889-118008:1:exon
so has part: feature:118632-118836:1:exon
so has part: feature:120299-120701:1:exon
so has part: feature:121421-121988:1:exon
so has part: feature:123167-123259:1:exon

XP_015505880.1
type: Protein
SIO_000068: ncbiprotein

position:116991:1
position: 116991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123259:1
position: 123259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116991-117036:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:117686-117810:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:117889-118008:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:118632-118836:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:120299-120701:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:121421-121988:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:123167-123259:1:exon

SHISA4
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: SHISA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 124292..128503
location: region:124292-128503:1
so has part: feature:124292-128503:1:exon
subclass of: SO_0000010

107215024
type: Gene
SIO_000068: ncbigene

position:124292:1
position: 124292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128503:1
position: 128503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124292-128503:1:exon

SHISA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: SHISA4
product: shisa family member 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_015650945.3
SIO_010081: SHISA4
subclass of: SO_0000673
so part of: SHISA4
location: join(124292..124563,125553..125724,126669..126802,127840..128016,128103..128503)
location: region:124292-128503:1
so has part: feature:124292-124563:1:exon
so has part: feature:125553-125724:1:exon
so has part: feature:126669-126802:1:exon
so has part: feature:127840-128016:1:exon
so has part: feature:128103-128503:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:124292-124563:1:exon

position:124563:1
position: 124563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:125553-125724:1:exon

position:125553:1
position: 125553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125724:1
position: 125724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:126669-126802:1:exon

position:126669:1
position: 126669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126802:1
position: 126802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:127840-128016:1:exon

position:127840:1
position: 127840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128016:1
position: 128016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:128103-128503:1:exon

position:128103:1
position: 128103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SHISA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: SHISA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein shisa-4
translation: MGPGGPGSGWPLAGTLLVAVAASMVAGGEDCLWYVDRNGSWHPGFDCEFFTFCCGTCHQRYCCRDPLRLLTERQQRHCLAFSPKTIAGIASAVVLFIAIVTTIVCCFMCSCCYLYQRRQHSRTPLQGPEIPLSSYPPAAPPAPFPMDPKASPMPPQPGFTPMYPTPGSAAPYPMYPSGPPVYNPTAPPPYVPAQPSYPGA
SIO_010081: SHISA4
subclass of: SO_0000673
so part of: SHISA4
location: join(124491..124563,125553..125724,126669..126802,127840..128016,128103..128149)
location: region:124491-128149:1
so has part: feature:124491-124563:1:exon
so has part: feature:125553-125724:1:exon
so has part: feature:126669-126802:1:exon
so has part: feature:127840-128016:1:exon
so has part: feature:128103-128149:1:exon

XP_015506431.1
type: Protein
SIO_000068: ncbiprotein

position:124491:1
position: 124491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128149:1
position: 128149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124491-124563:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:125553-125724:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126669-126802:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:127840-128016:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:128103-128149:1:exon

LOC107215026
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107215026
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(129049..131534)
location: region:129049-131534:-1
so has part: feature:129049-131534:-1:exon
subclass of: SO_0000010

107215026
type: Gene
SIO_000068: ncbigene

position:129049:-1
position: 129049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131534:-1
position: 131534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129049-131534:-1:exon

LOC107215026
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107215026
product: collagen alpha-1(I) chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
transcript id: XM_015650946.2
SIO_010081: LOC107215026
subclass of: SO_0000673
so part of: LOC107215026
location: complement(join(129049..129723,131099..131534))
location: region:129049-131534:-1
so has part: feature:131099-131534:-1:exon
so has part: feature:129049-129723:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:131099-131534:-1:exon

position:131099:-1
position: 131099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:129049-129723:-1:exon

position:129723:-1
position: 129723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107215026
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107215026
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-1(I) chain-like
translation: MSEVLRYEPLLFGAAAGTVNAYEKQKIWWRITHKVNAAGRHQRDIGEVKNRWRGLRRRAGDKISRHRLERQGPAGRAAARNGSTGNNGSSGNGAAEPDPGPAPVPAWGPRGAAGADPAMRSVQGSAQHGAKEEPVKEEPVEVKTEPFHSPAADGIPGRGSDCRLPRTGICPPSELCEGWSRNPPRPAPSELSLGDLSGQQEPLGSDFPSLLLEQEAEQLSHCAGEAGPPGPAGLDGTPECPQPSLVQSHERLVQEMQAFRREYAESCRETTAVLRTIAQALGMLSRSLAEIRDLYLRERGVPKS
SIO_010081: LOC107215026
subclass of: SO_0000673
so part of: LOC107215026
location: complement(join(129194..129723,131099..131483))
location: region:129194-131483:-1
so has part: feature:131099-131483:-1:exon
so has part: feature:129194-129723:-1:exon

XP_015506432.2
type: Protein
SIO_000068: ncbiprotein

position:129194:-1
position: 129194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131483:-1
position: 131483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131099-131483:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:129194-129723:-1:exon

LMOD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LMOD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(132928..151073)
location: region:132928-151073:-1
so has part: feature:132928-151073:-1:exon
subclass of: SO_0000010

107215012
type: Gene
SIO_000068: ncbigene

position:132928:-1
position: 132928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151073:-1
position: 151073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132928-151073:-1:exon

LMOD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LMOD1
product: leiomodin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_015650927.3
SIO_010081: LMOD1
subclass of: SO_0000673
so part of: LMOD1
location: complement(join(132928..133756,134852..136435,150546..151073))
location: region:132928-151073:-1
so has part: feature:150546-151073:-1:exon
so has part: feature:134852-136435:-1:exon
so has part: feature:132928-133756:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:150546-151073:-1:exon

position:150546:-1
position: 150546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:134852-136435:-1:exon

position:134852:-1
position: 134852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136435:-1
position: 136435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:132928-133756:-1:exon

position:133756:-1
position: 133756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LMOD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LMOD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leiomodin-1
translation: MSKVAKYRRQVSEDPDIDNLLSTLSPEEMEELEKELDVVDADGSIPVDRSQTNQSETPSPGPQNCDTTLNHHDKDTRRLLQREHSVDESRLSKNKGDKNQDEKGKESSSKDLAQKQDTKVGKDSKKEESVSKTDLKGKAETETKSKENKAMNDKVKAMEKKLMGKDKKEEEKGSVLRKDTGKEKKEEEKSSELKKDAGKDKKEEDSSSYFKKKDAGKDKKDEEKVSAEKEETEKEKKQEEDSASKDTGKDKKEKSSESKKHPEKDIRGEGKKENDKKEEEKASALKKSKADEKDESQAEAEKAEKVEEKQEAKAGAGSSPSKPSSSSSADQAKDDEASSIFDELIEKVKNNDAEVTEVNVNNSDCINNETLVRFTEALEFNTVVKVFALANTRADDHVAFAIAIMLKSNKVLTSINLDSNHITGKGILAIFRALLQNNTLTELRFHNQRHICGGKTEMEIAKLLKENTTLLKLGYHFELAGPRMTVTNLLSRNMDRQRQKRLQEQKLAQEQGEKKVLLEVPKPGPLLKGSPKASPQPSPKASPKSSPKKGGEPAMPPPPPPPLAPPLMINENLKNSLSPATQRKLGDRALPVQEKNSRDQLLAAIRSSNLKQLKKVELPKLLQ
SIO_010081: LMOD1
subclass of: SO_0000673
so part of: LMOD1
location: complement(join(133730..133756,134852..136435,150546..150806))
location: region:133730-150806:-1
so has part: feature:150546-150806:-1:exon
so has part: feature:134852-136435:-1:exon
so has part: feature:133730-133756:-1:exon

XP_015506413.2
type: Protein
SIO_000068: ncbiprotein

position:133730:-1
position: 133730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150806:-1
position: 150806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150546-150806:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:134852-136435:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133730-133756:-1:exon

TIMM17A
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: TIMM17A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 157547..166499
location: region:157547-166499:1
so has part: feature:157547-166499:1:exon
subclass of: SO_0000010

107214959
type: Gene
SIO_000068: ncbigene

position:157547:1
position: 157547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166499:1
position: 166499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157547-166499:1:exon

TIMM17A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: TIMM17A
product: translocase of inner mitochondrial membrane 17A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 17 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_015650802.3
SIO_010081: TIMM17A
subclass of: SO_0000673
so part of: TIMM17A
location: join(157547..157676,162052..162151,163571..163634,164390..164518,165061..165171,166184..166499)
location: region:157547-166499:1
so has part: feature:157547-157676:1:exon
so has part: feature:162052-162151:1:exon
so has part: feature:163571-163634:1:exon
so has part: feature:164390-164518:1:exon
so has part: feature:165061-165171:1:exon
so has part: feature:166184-166499:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:157547-157676:1:exon

position:157676:1
position: 157676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:162052-162151:1:exon

position:162052:1
position: 162052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162151:1
position: 162151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:163571-163634:1:exon

position:163571:1
position: 163571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163634:1
position: 163634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:164390-164518:1:exon

position:164390:1
position: 164390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164518:1
position: 164518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:165061-165171:1:exon

position:165061:1
position: 165061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165171:1
position: 165171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:166184-166499:1:exon

position:166184:1
position: 166184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TIMM17A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: TIMM17A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial import inner membrane translocase subunit Tim17-A
translation: MEEYAREPCPWRIVDDCGGAFTMGAIGGGIFQAIKGFRNSPVGVNHRLRGSLTAIKTRAPQLGGSFAVWGGLFSMIDCSMVRMRGKEDPWNSITSGALTGAILAARNGPVAMVGSAAMGGILLALIEGAGILLTRFASTQFPNGPQLSEDPSQLQPPPFSDYRQYQ
SIO_010081: TIMM17A
subclass of: SO_0000673
so part of: TIMM17A
location: join(157651..157676,162052..162151,163571..163634,164390..164518,165061..165171,166184..166254)
location: region:157651-166254:1
so has part: feature:157651-157676:1:exon
so has part: feature:162052-162151:1:exon
so has part: feature:163571-163634:1:exon
so has part: feature:164390-164518:1:exon
so has part: feature:165061-165171:1:exon
so has part: feature:166184-166254:1:exon

XP_015506288.1
type: Protein
SIO_000068: ncbiprotein

position:157651:1
position: 157651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166254:1
position: 166254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157651-157676:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:162052-162151:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:163571-163634:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:164390-164518:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165061-165171:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:166184-166254:1:exon

ADIPOR1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: ADIPOR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(167377..173812)
location: region:167377-173812:-1
so has part: feature:167377-173812:-1:exon
subclass of: SO_0000010

107214957
type: Gene
SIO_000068: ncbigene

position:167377:-1
position: 167377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173812:-1
position: 173812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167377-173812:-1:exon

ADIPOR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ADIPOR1
product: adiponectin receptor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 26 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_015650801.3
SIO_010081: ADIPOR1
subclass of: SO_0000673
so part of: ADIPOR1
location: complement(join(167377..168104,168391..168584,169736..169923,170857..171043,171942..172113,172722..172841,173412..173622,173729..173812))
location: region:167377-173812:-1
so has part: feature:173729-173812:-1:exon
so has part: feature:173412-173622:-1:exon
so has part: feature:172722-172841:-1:exon
so has part: feature:171942-172113:-1:exon
so has part: feature:170857-171043:-1:exon
so has part: feature:169736-169923:-1:exon
so has part: feature:168391-168584:-1:exon
so has part: feature:167377-168104:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:173729-173812:-1:exon

position:173729:-1
position: 173729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:173412-173622:-1:exon

position:173412:-1
position: 173412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173622:-1
position: 173622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:172722-172841:-1:exon

position:172722:-1
position: 172722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172841:-1
position: 172841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:171942-172113:-1:exon

position:171942:-1
position: 171942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172113:-1
position: 172113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:170857-171043:-1:exon

position:170857:-1
position: 170857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171043:-1
position: 171043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:169736-169923:-1:exon

position:169736:-1
position: 169736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169923:-1
position: 169923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:168391-168584:-1:exon

position:168391:-1
position: 168391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168584:-1
position: 168584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:167377-168104:-1:exon

position:168104:-1
position: 168104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADIPOR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ADIPOR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adiponectin receptor protein 1
translation: MASRKAPAGAGSGLAAAGRERERERAHLELAELGPLLEEKGDQGATGAASAEDPPGPAAREEEEEEVVRVLTLPLQAHHAMEKMEEFVYKVWEGRWRVIPYDVLPDWLKDNDYLLHGHRPPMPSFRACFRSIFRIHTETGNIWTHLLGFVLFLCLGILTMLRPNMYFMAPLQEKVVFGMFFLGAVLCLSFSWLFHTVYCHSEKVSRTFSKLDYSGIALLIMGSFVPWLYYSFYCSPQPRLIYLSIVCVLGISAIIVAQWDRFATPKHRQTRAGVFLGLGLSGVVPTMHFTIAEGFVKATTVGQMGWFFLMAVMYITGAGLYAARIPERFFPGKFDIWFQSHQIFHVLVVAAAFVHFYGVSNLQEFRYGLEGGCTDDSLL
SIO_010081: ADIPOR1
subclass of: SO_0000673
so part of: ADIPOR1
location: complement(join(167976..168104,168391..168584,169736..169923,170857..171043,171942..172113,172722..172841,173412..173561))
location: region:167976-173561:-1
so has part: feature:173412-173561:-1:exon
so has part: feature:172722-172841:-1:exon
so has part: feature:171942-172113:-1:exon
so has part: feature:170857-171043:-1:exon
so has part: feature:169736-169923:-1:exon
so has part: feature:168391-168584:-1:exon
so has part: feature:167976-168104:-1:exon

XP_015506287.1
type: Protein
SIO_000068: ncbiprotein

position:167976:-1
position: 167976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173561:-1
position: 173561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173412-173561:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:172722-172841:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:171942-172113:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:170857-171043:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:169736-169923:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:168391-168584:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:167976-168104:-1:exon

LOC107214829
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107214829
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 176621..179152
location: region:176621-179152:1
so has part: feature:176621-179152:1:exon
subclass of: SO_0000010

107214829
type: Gene
SIO_000068: ncbigene

position:176621:1
position: 176621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179152:1
position: 179152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176621-179152:1:exon

LOC107214829
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107214829
product: tetraspanin-18-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 23% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033519837.1
SIO_010081: LOC107214829
subclass of: SO_0000673
so part of: LOC107214829
location: join(176621..176774,177020..177214,177757..177972,178070..178214,178272..178429,178682..178765,179105..179152)
location: region:176621-179152:1
so has part: feature:176621-176774:1:exon
so has part: feature:177020-177214:1:exon
so has part: feature:177757-177972:1:exon
so has part: feature:178070-178214:1:exon
so has part: feature:178272-178429:1:exon
so has part: feature:178682-178765:1:exon
so has part: feature:179105-179152:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:176621-176774:1:exon

position:176774:1
position: 176774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:177020-177214:1:exon

position:177020:1
position: 177020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177214:1
position: 177214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:177757-177972:1:exon

position:177757:1
position: 177757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177972:1
position: 177972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:178070-178214:1:exon

position:178070:1
position: 178070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178214:1
position: 178214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:178272-178429:1:exon

position:178272:1
position: 178272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178429:1
position: 178429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:178682-178765:1:exon

position:178682:1
position: 178682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178765:1
position: 178765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:179105-179152:1:exon

position:179105:1
position: 179105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107214829
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107214829
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-18-like
translation: MGSRTNQGWLWPGLCSPLHRDKHCRVPPPGVSMGVLSCMKYLMFIFNVLVFAGGTCLTGMGVWVATDPAGFQDIVAARAVLSAGAWLLLAVGIALSLLGFLGCCGALRRSRPLLLLFFILVSLVFLAQLVGAILFLVHWKQVLTPSPASAASLCHTMAMAQSPPGDRGWPRDTLPLTSVTSTTHTSKQVQPEHFLSELQKNYGGDESAEVFSTAWNTLMVTVSSWEAPGGHTGSTKGPKDFGNGSRFQELHPGMPWPQACCARDGFLLAGELLGWEQCQDRSPGYIHEQGCFFTFGRTLQRYISLPGTCSLAVLGIEIFAMFFAFCLYYNFD
SIO_010081: LOC107214829
subclass of: SO_0000673
so part of: LOC107214829
location: join(176622..176774,177020..177214,177757..177972,178070..178214,178272..178429,178682..178765,179105..179152)
location: region:176622-179152:1
so has part: feature:176622-176774:1:exon
so has part: feature:177020-177214:1:exon
so has part: feature:177757-177972:1:exon
so has part: feature:178070-178214:1:exon
so has part: feature:178272-178429:1:exon
so has part: feature:178682-178765:1:exon
so has part: feature:179105-179152:1:exon

XP_033375728.1
type: Protein
SIO_000068: ncbiprotein

position:176622:1
position: 176622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176622-176774:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:177020-177214:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:177757-177972:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:178070-178214:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:178272-178429:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:178682-178765:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:179105-179152:1:exon

UBE2T
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: UBE2T
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(180981..186066)
location: region:180981-186066:-1
so has part: feature:180981-186066:-1:exon
subclass of: SO_0000010

107214737
type: Gene
SIO_000068: ncbigene

position:180981:-1
position: 180981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186066:-1
position: 186066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180981-186066:-1:exon

UBE2T
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: UBE2T
product: ubiquitin conjugating enzyme E2 T
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_015650386.3
SIO_010081: UBE2T
subclass of: SO_0000673
so part of: UBE2T
location: complement(join(180981..181276,182159..182239,182644..182742,183193..183298,184009..184078,184942..185081,185972..186066))
location: region:180981-186066:-1
so has part: feature:185972-186066:-1:exon
so has part: feature:184942-185081:-1:exon
so has part: feature:184009-184078:-1:exon
so has part: feature:183193-183298:-1:exon
so has part: feature:182644-182742:-1:exon
so has part: feature:182159-182239:-1:exon
so has part: feature:180981-181276:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:185972-186066:-1:exon

position:185972:-1
position: 185972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:184942-185081:-1:exon

position:184942:-1
position: 184942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185081:-1
position: 185081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:184009-184078:-1:exon

position:184009:-1
position: 184009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184078:-1
position: 184078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:183193-183298:-1:exon

position:183193:-1
position: 183193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183298:-1
position: 183298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:182644-182742:-1:exon

position:182644:-1
position: 182644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182742:-1
position: 182742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:182159-182239:-1:exon

position:182159:-1
position: 182159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182239:-1
position: 182239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:180981-181276:-1:exon

position:181276:-1
position: 181276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UBE2T
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: UBE2T
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 T
translation: MQRASRLTRELSLLATEPPPGITCWQNGQVNDLQAQILGGVDTPYEKGIFNLEIIVPERYPFEPPKIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNISTLLTSIQLLMAEPNPDDPLMADISSEYKYNRQLFLLNAREWTKKYAGQSRASKPLEEKIIQSETSTSNELTMQKRKGVDISRKEKKSRPDS
SIO_010081: UBE2T
subclass of: SO_0000673
so part of: UBE2T
location: complement(join(181151..181276,182159..182239,182644..182742,183193..183298,184009..184078,184942..185047))
location: region:181151-185047:-1
so has part: feature:184942-185047:-1:exon
so has part: feature:184009-184078:-1:exon
so has part: feature:183193-183298:-1:exon
so has part: feature:182644-182742:-1:exon
so has part: feature:182159-182239:-1:exon
so has part: feature:181151-181276:-1:exon

XP_015505872.1
type: Protein
SIO_000068: ncbiprotein

position:181151:-1
position: 181151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185047:-1
position: 185047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184942-185047:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184009-184078:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:183193-183298:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:182644-182742:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:182159-182239:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:181151-181276:-1:exon

LOC107214980
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107214980
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 186230..202452
location: region:186230-202452:1
so has part: feature:186230-202452:1:exon
subclass of: SO_0000010

107214980
type: Gene
SIO_000068: ncbigene

position:186230:1
position: 186230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202452:1
position: 202452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186230-202452:1:exon

LOC107214980
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107214980
product: cryptochrome-1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 1 EST, 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_015650874.3
SIO_010081: LOC107214980
subclass of: SO_0000673
so part of: LOC107214980
location: join(186230..186494,187476..187602,189978..190438,191330..191446,194147..194294,194546..194686,195818..195988,197482..197622,198060..198211,199361..199458,199918..200028,201085..202452)
location: region:186230-202452:1
so has part: feature:186230-186494:1:exon
so has part: feature:187476-187602:1:exon
so has part: feature:189978-190438:1:exon
so has part: feature:191330-191446:1:exon
so has part: feature:194147-194294:1:exon
so has part: feature:194546-194686:1:exon
so has part: feature:195818-195988:1:exon
so has part: feature:197482-197622:1:exon
so has part: feature:198060-198211:1:exon
so has part: feature:199361-199458:1:exon
so has part: feature:199918-200028:1:exon
so has part: feature:201085-202452:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:186230-186494:1:exon

position:186494:1
position: 186494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:187476-187602:1:exon

position:187476:1
position: 187476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187602:1
position: 187602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:189978-190438:1:exon

position:189978:1
position: 189978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190438:1
position: 190438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:191330-191446:1:exon

position:191330:1
position: 191330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191446:1
position: 191446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:194147-194294:1:exon

position:194147:1
position: 194147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194294:1
position: 194294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:194546-194686:1:exon

position:194546:1
position: 194546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194686:1
position: 194686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:195818-195988:1:exon

position:195818:1
position: 195818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195988:1
position: 195988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:197482-197622:1:exon

position:197482:1
position: 197482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197622:1
position: 197622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:198060-198211:1:exon

position:198060:1
position: 198060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198211:1
position: 198211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:199361-199458:1:exon

position:199361:1
position: 199361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199458:1
position: 199458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:199918-200028:1:exon

position:199918:1
position: 199918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200028:1
position: 200028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:201085-202452:1:exon

position:201085:1
position: 201085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107214980
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107214980
product: cryptochrome-1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 1 EST, 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_015650873.3
SIO_010081: LOC107214980
subclass of: SO_0000673
so part of: LOC107214980
location: join(186231..186494,189978..190438,191330..191446,194147..194294,194546..194686,195818..195988,197482..197622,198060..198211,199361..199458,199918..200028,201085..202452)
location: region:186231-202452:1
so has part: feature:186231-186494:1:exon
so has part: feature:189978-190438:1:exon
so has part: feature:191330-191446:1:exon
so has part: feature:194147-194294:1:exon
so has part: feature:194546-194686:1:exon
so has part: feature:195818-195988:1:exon
so has part: feature:197482-197622:1:exon
so has part: feature:198060-198211:1:exon
so has part: feature:199361-199458:1:exon
so has part: feature:199918-200028:1:exon
so has part: feature:201085-202452:1:exon

position:186231:1
position: 186231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186231-186494:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:189978-190438:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:191330-191446:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:194147-194294:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:194546-194686:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:195818-195988:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197482-197622:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:198060-198211:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:199361-199458:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:199918-200028:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:201085-202452:1:exon

LOC107214980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107214980
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cryptochrome-1-like
translation: MLHRTIHLFRKELRLHDNPVLLAALESSEALYPVFILDRAFLTSSMHIGALRWHFLLQSLEDLHKSLGQLGSCLLVIQGEYEAVLRDHIQKWNITQVTLDAAMEPFYKEMEANIRRLGAELGFEVLSLVGHSLYNTQRILDINGGSPPLTYKRFLHILSLLGDPEVPVRNLTAEDFQRCRAPDPSLAECYRVPLPVDLKISPESLSPWRGGETEGLQRLEQHLSDQGWVTSFAKPRTIPNSLLPSTTGLSPYFSTGCLSVRMFFYRLSNIYAQAKHHSLPPVSLQGQLLWREFFYTVASATPNFTQMSGNPICLQICWYKDAERLDKWKTAQTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADYSINAGNWMWLSASAFFHQYTRIFCPVRFGKRTDPQGDYIRKYLPILKNFPSKYIYEPWTASEEEQKQAGCIIGQDYPFPMVNHKEASEHNLQLMKQVREEQHRTAQLTRDDADDPMEIKVKRDRSEENISKGKVARMTE
SIO_010081: LOC107214980
subclass of: SO_0000673
so part of: LOC107214980
location: join(190026..190438,191330..191446,194147..194294,194546..194686,195818..195988,197482..197622,198060..198211,199361..199458,199918..200028,201085..201176)
location: region:190026-201176:1
so has part: feature:190026-190438:1:exon
so has part: feature:191330-191446:1:exon
so has part: feature:194147-194294:1:exon
so has part: feature:194546-194686:1:exon
so has part: feature:195818-195988:1:exon
so has part: feature:197482-197622:1:exon
so has part: feature:198060-198211:1:exon
so has part: feature:199361-199458:1:exon
so has part: feature:199918-200028:1:exon
so has part: feature:201085-201176:1:exon

XP_015506359.1
type: Protein
SIO_000068: ncbiprotein

position:190026:1
position: 190026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201176:1
position: 201176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190026-190438:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:191330-191446:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194147-194294:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:194546-194686:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195818-195988:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:197482-197622:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:198060-198211:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:199361-199458:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:199918-200028:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:201085-201176:1:exon

LOC107214980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107214980
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cryptochrome-1-like
translation: MLHRTIHLFRKELRLHDNPVLLAALESSEALYPVFILDRAFLTSSMHIGALRWHFLLQSLEDLHKSLGQLGSCLLVIQGEYEAVLRDHIQKWNITQVTLDAAMEPFYKEMEANIRRLGAELGFEVLSLVGHSLYNTQRILDINGGSPPLTYKRFLHILSLLGDPEVPVRNLTAEDFQRCRAPDPSLAECYRVPLPVDLKISPESLSPWRGGETEGLQRLEQHLSDQGWVTSFAKPRTIPNSLLPSTTGLSPYFSTGCLSVRMFFYRLSNIYAQAKHHSLPPVSLQGQLLWREFFYTVASATPNFTQMSGNPICLQICWYKDAERLDKWKTAQTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADYSINAGNWMWLSASAFFHQYTRIFCPVRFGKRTDPQGDYIRKYLPILKNFPSKYIYEPWTASEEEQKQAGCIIGQDYPFPMVNHKEASEHNLQLMKQVREEQHRTAQLTRDDADDPMEIKVKRDRSEENISKGKVARMTE
SIO_010081: LOC107214980
subclass of: SO_0000673
so part of: LOC107214980
location: join(190026..190438,191330..191446,194147..194294,194546..194686,195818..195988,197482..197622,198060..198211,199361..199458,199918..200028,201085..201176)
location: region:190026-201176:1
so has part: feature:190026-190438:1:exon
so has part: feature:191330-191446:1:exon
so has part: feature:194147-194294:1:exon
so has part: feature:194546-194686:1:exon
so has part: feature:195818-195988:1:exon
so has part: feature:197482-197622:1:exon
so has part: feature:198060-198211:1:exon
so has part: feature:199361-199458:1:exon
so has part: feature:199918-200028:1:exon
so has part: feature:201085-201176:1:exon

XP_015506360.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:190026-190438:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:191330-191446:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194147-194294:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:194546-194686:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195818-195988:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:197482-197622:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:198060-198211:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:199361-199458:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:199918-200028:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:201085-201176:1:exon

LRIF1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LRIF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 205789..217447
location: region:205789-217447:1
so has part: feature:205789-217447:1:exon
subclass of: SO_0000010

107214856
type: Gene
SIO_000068: ncbigene

position:205789:1
position: 205789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217447:1
position: 217447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205789-217447:1:exon

LRIF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LRIF1
product: ligand dependent nuclear receptor interacting factor 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_015650590.3
SIO_010081: LRIF1
subclass of: SO_0000673
so part of: LRIF1
location: join(205789..205885,211626..213141,215995..217447)
location: region:205789-217447:1
so has part: feature:205789-205885:1:exon
so has part: feature:211626-213141:1:exon
so has part: feature:215995-217447:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205789-205885:1:exon

position:205885:1
position: 205885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:211626-213141:1:exon

position:211626:1
position: 211626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213141:1
position: 213141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:215995-217447:1:exon

position:215995:1
position: 215995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LRIF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LRIF1
product: ligand dependent nuclear receptor interacting factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_015650583.3
SIO_010081: LRIF1
subclass of: SO_0000673
so part of: LRIF1
location: join(205790..205885,211626..213141,214484..214762,215995..217447)
location: region:205790-217447:1
so has part: feature:205790-205885:1:exon
so has part: feature:211626-213141:1:exon
so has part: feature:214484-214762:1:exon
so has part: feature:215995-217447:1:exon

position:205790:1
position: 205790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205790-205885:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:211626-213141:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214484-214762:1:exon

position:214484:1
position: 214484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214762:1
position: 214762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:215995-217447:1:exon

LRIF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LRIF1
product: ligand dependent nuclear receptor interacting factor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_015650585.3
SIO_010081: LRIF1
subclass of: SO_0000673
so part of: LRIF1
location: join(205791..205885,209519..209594,211626..213141,214484..214762,215995..217447)
location: region:205791-217447:1
so has part: feature:205791-205885:1:exon
so has part: feature:209519-209594:1:exon
so has part: feature:211626-213141:1:exon
so has part: feature:214484-214762:1:exon
so has part: feature:215995-217447:1:exon

position:205791:1
position: 205791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205791-205885:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209519-209594:1:exon

position:209519:1
position: 209519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209594:1
position: 209594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:211626-213141:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214484-214762:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215995-217447:1:exon

LRIF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LRIF1
product: ligand dependent nuclear receptor interacting factor 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_015650584.3
SIO_010081: LRIF1
subclass of: SO_0000673
so part of: LRIF1
location: join(205823..205934,209519..209594,211626..213141,214484..214762,215995..217447)
location: region:205823-217447:1
so has part: feature:205823-205934:1:exon
so has part: feature:209519-209594:1:exon
so has part: feature:211626-213141:1:exon
so has part: feature:214484-214762:1:exon
so has part: feature:215995-217447:1:exon

position:205823:1
position: 205823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205823-205934:1:exon

position:205934:1
position: 205934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:209519-209594:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:211626-213141:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:214484-214762:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215995-217447:1:exon

LRIF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LRIF1
product: ligand dependent nuclear receptor interacting factor 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_015650588.3
SIO_010081: LRIF1
subclass of: SO_0000673
so part of: LRIF1
location: join(205825..205934,211626..213141,214484..214762,215995..217447)
location: region:205825-217447:1
so has part: feature:205825-205934:1:exon
so has part: feature:211626-213141:1:exon
so has part: feature:214484-214762:1:exon
so has part: feature:215995-217447:1:exon

position:205825:1
position: 205825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205825-205934:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:211626-213141:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214484-214762:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215995-217447:1:exon

LRIF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LRIF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ligand-dependent nuclear receptor-interacting factor 1 isoform X1
translation: MSRSPEQRPQFIAGCMYRVIQTTGPDGKKLLKLLPISKTSGSFVPIVQSPAMPNNSNANVSSPVHLTFKTQLGNTAAPSSVKIPIFQPPNPGKIILRRTLDKQESARAGSEKESSIPSAAVNSQSSCVPMDGVSLQNVVITSSSHQSSTTYMVVNTKSLPVTAKSAVLPSGHHLQIPADAEVKSVPASLLPPAIQQKILAAAATSVSGGADGTKTPTVIYVSPVNTVKTSQVLPKCLQSFCPKSAMEVSKTLVVTAGQKGSGSSPEPVTPEGQQCQQAPMKWIVQETAPLSAACLIPVKSSNNVASKILKTLSDMKNVEVNTANILPLCSSGPGGSQTKITPLKDNALVMYNGKIYLLTKRGSDVLSAQADKQTSSSSDALLKKEAPKQIDSTEVNKTTSKVVNLVLSSKGVVLSQKDPNPCTVSTNSSPVGLRNDLKSTSAALLTASADQQDPTVIQRQNLPFTKSISCSGVIPVPAVGMQESVWQNGKDTSHSPRAAVLPQAKQECAVSEEWPKIQCEKMDSPGKVIQIKHQENQHWRQFLELRKKFGLSKEERVYLTRIPLRAFCESPEEGVCSSDSLERKNDSCSSSSLDVEIMNHHQECVKEKKIAVDLEEDLTRRRKIKSSPLLDSGKRRRTSTKSATSPSLEVSSSSCSAVSRSVSPPAAPPPPAVPTGSAGASQGRDSEQDAFPRCSDTAHPGISLLLNPEEDASVLEGSFRDDAFPVAPPDLDETIRDEKIKRLKQLLREREAALEEMRREMQQS
SIO_010081: LRIF1
subclass of: SO_0000673
so part of: LRIF1
location: join(205854..205885,211626..213141,214484..214762,215995..216462)
location: region:205854-216462:1
so has part: feature:205854-205885:1:exon
so has part: feature:211626-213141:1:exon
so has part: feature:214484-214762:1:exon
so has part: feature:215995-216462:1:exon

XP_015506069.1
type: Protein
SIO_000068: ncbiprotein

position:205854:1
position: 205854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216462:1
position: 216462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205854-205885:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:211626-213141:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214484-214762:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215995-216462:1:exon

LRIF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LRIF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ligand-dependent nuclear receptor-interacting factor 1 isoform X3
translation: MSRSPEQRPQFIAGCMYRVIQTTGPDGKKLLKLLPISKTSGSFVPIVQSPAMPNNSNANVSSPVHLTFKTQLGNTAAPSSVKIPIFQPPNPGKIILRRTLDKQESARAGSEKESSIPSAAVNSQSSCVPMDGVSLQNVVITSSSHQSSTTYMVVNTKSLPVTAKSAVLPSGHHLQIPADAEVKSVPASLLPPAIQQKILAAAATSVSGGADGTKTPTVIYVSPVNTVKTSQVLPKCLQSFCPKSAMEVSKTLVVTAGQKGSGSSPEPVTPEGQQCQQAPMKWIVQETAPLSAACLIPVKSSNNVASKILKTLSDMKNVEVNTANILPLCSSGPGGSQTKITPLKDNALVMYNGKIYLLTKRGSDVLSAQADKQTSSSSDALLKKEAPKQIDSTEVNKTTSKVVNLVLSSKGVVLSQKDPNPCTVSTNSSPVGLRNDLKSTSAALLTASADQQDPTVIQRQNLPFTKSISCSGVIPVPAVGMQESVWQNGKDTSHSPRAAVLPQAKQECAVSEEWPKIAVDLEEDLTRRRKIKSSPLLDSGKRRRTSTKSATSPSLEVSSSSCSAVSRSVSPPAAPPPPAVPTGSAGASQGRDSEQDAFPRCSDTAHPGISLLLNPEEDASVLEGSFRDDAFPVAPPDLDETIRDEKIKRLKQLLREREAALEEMRREMQQS
SIO_010081: LRIF1
subclass of: SO_0000673
so part of: LRIF1
location: join(205854..205885,211626..213141,215995..216462)
location: region:205854-216462:1
so has part: feature:205854-205885:1:exon
so has part: feature:211626-213141:1:exon
so has part: feature:215995-216462:1:exon

XP_015506076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:205854-205885:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:211626-213141:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215995-216462:1:exon

LRIF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LRIF1
product: ligand dependent nuclear receptor interacting factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_033519859.1
SIO_010081: LRIF1
subclass of: SO_0000673
so part of: LRIF1
location: join(207467..209594,211626..213141,214484..214762,215995..217447)
location: region:207467-217447:1
so has part: feature:207467-209594:1:exon
so has part: feature:211626-213141:1:exon
so has part: feature:214484-214762:1:exon
so has part: feature:215995-217447:1:exon

position:207467:1
position: 207467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207467-209594:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:211626-213141:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214484-214762:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215995-217447:1:exon

LRIF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LRIF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ligand-dependent nuclear receptor-interacting factor 1 isoform X2
translation: MYRVIQTTGPDGKKLLKLLPISKTSGSFVPIVQSPAMPNNSNANVSSPVHLTFKTQLGNTAAPSSVKIPIFQPPNPGKIILRRTLDKQESARAGSEKESSIPSAAVNSQSSCVPMDGVSLQNVVITSSSHQSSTTYMVVNTKSLPVTAKSAVLPSGHHLQIPADAEVKSVPASLLPPAIQQKILAAAATSVSGGADGTKTPTVIYVSPVNTVKTSQVLPKCLQSFCPKSAMEVSKTLVVTAGQKGSGSSPEPVTPEGQQCQQAPMKWIVQETAPLSAACLIPVKSSNNVASKILKTLSDMKNVEVNTANILPLCSSGPGGSQTKITPLKDNALVMYNGKIYLLTKRGSDVLSAQADKQTSSSSDALLKKEAPKQIDSTEVNKTTSKVVNLVLSSKGVVLSQKDPNPCTVSTNSSPVGLRNDLKSTSAALLTASADQQDPTVIQRQNLPFTKSISCSGVIPVPAVGMQESVWQNGKDTSHSPRAAVLPQAKQECAVSEEWPKIQCEKMDSPGKVIQIKHQENQHWRQFLELRKKFGLSKEERVYLTRIPLRAFCESPEEGVCSSDSLERKNDSCSSSSLDVEIMNHHQECVKEKKIAVDLEEDLTRRRKIKSSPLLDSGKRRRTSTKSATSPSLEVSSSSCSAVSRSVSPPAAPPPPAVPTGSAGASQGRDSEQDAFPRCSDTAHPGISLLLNPEEDASVLEGSFRDDAFPVAPPDLDETIRDEKIKRLKQLLREREAALEEMRREMQQS
SIO_010081: LRIF1
subclass of: SO_0000673
so part of: LRIF1
location: join(211639..213141,214484..214762,215995..216462)
location: region:211639-216462:1
so has part: feature:211639-213141:1:exon
so has part: feature:214484-214762:1:exon
so has part: feature:215995-216462:1:exon

XP_033375750.1
type: Protein
SIO_000068: ncbiprotein

position:211639:1
position: 211639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211639-213141:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214484-214762:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215995-216462:1:exon

LRIF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LRIF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ligand-dependent nuclear receptor-interacting factor 1 isoform X2
translation: MYRVIQTTGPDGKKLLKLLPISKTSGSFVPIVQSPAMPNNSNANVSSPVHLTFKTQLGNTAAPSSVKIPIFQPPNPGKIILRRTLDKQESARAGSEKESSIPSAAVNSQSSCVPMDGVSLQNVVITSSSHQSSTTYMVVNTKSLPVTAKSAVLPSGHHLQIPADAEVKSVPASLLPPAIQQKILAAAATSVSGGADGTKTPTVIYVSPVNTVKTSQVLPKCLQSFCPKSAMEVSKTLVVTAGQKGSGSSPEPVTPEGQQCQQAPMKWIVQETAPLSAACLIPVKSSNNVASKILKTLSDMKNVEVNTANILPLCSSGPGGSQTKITPLKDNALVMYNGKIYLLTKRGSDVLSAQADKQTSSSSDALLKKEAPKQIDSTEVNKTTSKVVNLVLSSKGVVLSQKDPNPCTVSTNSSPVGLRNDLKSTSAALLTASADQQDPTVIQRQNLPFTKSISCSGVIPVPAVGMQESVWQNGKDTSHSPRAAVLPQAKQECAVSEEWPKIQCEKMDSPGKVIQIKHQENQHWRQFLELRKKFGLSKEERVYLTRIPLRAFCESPEEGVCSSDSLERKNDSCSSSSLDVEIMNHHQECVKEKKIAVDLEEDLTRRRKIKSSPLLDSGKRRRTSTKSATSPSLEVSSSSCSAVSRSVSPPAAPPPPAVPTGSAGASQGRDSEQDAFPRCSDTAHPGISLLLNPEEDASVLEGSFRDDAFPVAPPDLDETIRDEKIKRLKQLLREREAALEEMRREMQQS
SIO_010081: LRIF1
subclass of: SO_0000673
so part of: LRIF1
location: join(211639..213141,214484..214762,215995..216462)
location: region:211639-216462:1
so has part: feature:211639-213141:1:exon
so has part: feature:214484-214762:1:exon
so has part: feature:215995-216462:1:exon

XP_015506070.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211639-213141:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214484-214762:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215995-216462:1:exon

LRIF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LRIF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ligand-dependent nuclear receptor-interacting factor 1 isoform X2
translation: MYRVIQTTGPDGKKLLKLLPISKTSGSFVPIVQSPAMPNNSNANVSSPVHLTFKTQLGNTAAPSSVKIPIFQPPNPGKIILRRTLDKQESARAGSEKESSIPSAAVNSQSSCVPMDGVSLQNVVITSSSHQSSTTYMVVNTKSLPVTAKSAVLPSGHHLQIPADAEVKSVPASLLPPAIQQKILAAAATSVSGGADGTKTPTVIYVSPVNTVKTSQVLPKCLQSFCPKSAMEVSKTLVVTAGQKGSGSSPEPVTPEGQQCQQAPMKWIVQETAPLSAACLIPVKSSNNVASKILKTLSDMKNVEVNTANILPLCSSGPGGSQTKITPLKDNALVMYNGKIYLLTKRGSDVLSAQADKQTSSSSDALLKKEAPKQIDSTEVNKTTSKVVNLVLSSKGVVLSQKDPNPCTVSTNSSPVGLRNDLKSTSAALLTASADQQDPTVIQRQNLPFTKSISCSGVIPVPAVGMQESVWQNGKDTSHSPRAAVLPQAKQECAVSEEWPKIQCEKMDSPGKVIQIKHQENQHWRQFLELRKKFGLSKEERVYLTRIPLRAFCESPEEGVCSSDSLERKNDSCSSSSLDVEIMNHHQECVKEKKIAVDLEEDLTRRRKIKSSPLLDSGKRRRTSTKSATSPSLEVSSSSCSAVSRSVSPPAAPPPPAVPTGSAGASQGRDSEQDAFPRCSDTAHPGISLLLNPEEDASVLEGSFRDDAFPVAPPDLDETIRDEKIKRLKQLLREREAALEEMRREMQQS
SIO_010081: LRIF1
subclass of: SO_0000673
so part of: LRIF1
location: join(211639..213141,214484..214762,215995..216462)
location: region:211639-216462:1
so has part: feature:211639-213141:1:exon
so has part: feature:214484-214762:1:exon
so has part: feature:215995-216462:1:exon

XP_015506071.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211639-213141:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214484-214762:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215995-216462:1:exon

LRIF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LRIF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ligand-dependent nuclear receptor-interacting factor 1 isoform X2
translation: MYRVIQTTGPDGKKLLKLLPISKTSGSFVPIVQSPAMPNNSNANVSSPVHLTFKTQLGNTAAPSSVKIPIFQPPNPGKIILRRTLDKQESARAGSEKESSIPSAAVNSQSSCVPMDGVSLQNVVITSSSHQSSTTYMVVNTKSLPVTAKSAVLPSGHHLQIPADAEVKSVPASLLPPAIQQKILAAAATSVSGGADGTKTPTVIYVSPVNTVKTSQVLPKCLQSFCPKSAMEVSKTLVVTAGQKGSGSSPEPVTPEGQQCQQAPMKWIVQETAPLSAACLIPVKSSNNVASKILKTLSDMKNVEVNTANILPLCSSGPGGSQTKITPLKDNALVMYNGKIYLLTKRGSDVLSAQADKQTSSSSDALLKKEAPKQIDSTEVNKTTSKVVNLVLSSKGVVLSQKDPNPCTVSTNSSPVGLRNDLKSTSAALLTASADQQDPTVIQRQNLPFTKSISCSGVIPVPAVGMQESVWQNGKDTSHSPRAAVLPQAKQECAVSEEWPKIQCEKMDSPGKVIQIKHQENQHWRQFLELRKKFGLSKEERVYLTRIPLRAFCESPEEGVCSSDSLERKNDSCSSSSLDVEIMNHHQECVKEKKIAVDLEEDLTRRRKIKSSPLLDSGKRRRTSTKSATSPSLEVSSSSCSAVSRSVSPPAAPPPPAVPTGSAGASQGRDSEQDAFPRCSDTAHPGISLLLNPEEDASVLEGSFRDDAFPVAPPDLDETIRDEKIKRLKQLLREREAALEEMRREMQQS
SIO_010081: LRIF1
subclass of: SO_0000673
so part of: LRIF1
location: join(211639..213141,214484..214762,215995..216462)
location: region:211639-216462:1
so has part: feature:211639-213141:1:exon
so has part: feature:214484-214762:1:exon
so has part: feature:215995-216462:1:exon

XP_015506074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:211639-213141:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214484-214762:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215995-216462:1:exon

LRIF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LRIF1
product: ligand dependent nuclear receptor interacting factor 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_015650591.3
SIO_010081: LRIF1
subclass of: SO_0000673
so part of: LRIF1
location: join(213148..213272,214484..214762,215995..217447)
location: region:213148-217447:1
so has part: feature:213148-213272:1:exon
so has part: feature:214484-214762:1:exon
so has part: feature:215995-217447:1:exon

position:213148:1
position: 213148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213148-213272:1:exon

position:213272:1
position: 213272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:214484-214762:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215995-217447:1:exon

LRIF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LRIF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ligand-dependent nuclear receptor-interacting factor 1 isoform X4
translation: MALEEFTRSCNKVSWKCCPKIQCEKMDSPGKVIQIKHQENQHWRQFLELRKKFGLSKEERVYLTRIPLRAFCESPEEGVCSSDSLERKNDSCSSSSLDVEIMNHHQECVKEKKIAVDLEEDLTRRRKIKSSPLLDSGKRRRTSTKSATSPSLEVSSSSCSAVSRSVSPPAAPPPPAVPTGSAGASQGRDSEQDAFPRCSDTAHPGISLLLNPEEDASVLEGSFRDDAFPVAPPDLDETIRDEKIKRLKQLLREREAALEEMRREMQQS
SIO_010081: LRIF1
subclass of: SO_0000673
so part of: LRIF1
location: join(213213..213272,214484..214762,215995..216462)
location: region:213213-216462:1
so has part: feature:213213-213272:1:exon
so has part: feature:214484-214762:1:exon
so has part: feature:215995-216462:1:exon

XP_015506077.1
type: Protein
SIO_000068: ncbiprotein

position:213213:1
position: 213213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213213-213272:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214484-214762:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215995-216462:1:exon

DRAM2
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: DRAM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(221072..237293)
location: region:221072-237293:-1
so has part: feature:221072-237293:-1:exon
subclass of: SO_0000010

107214860
type: Gene
SIO_000068: ncbigene

position:221072:-1
position: 221072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237293:-1
position: 237293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221072-237293:-1:exon

DRAM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: DRAM2
product: DNA damage regulated autophagy modulator 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_015650596.2
SIO_010081: DRAM2
subclass of: SO_0000673
so part of: DRAM2
location: complement(join(221072..221396,221871..221963,222604..222686,225959..226136,228218..228357,228912..228979,229878..230035,232637..232730,237229..237293))
location: region:221072-237293:-1
so has part: feature:237229-237293:-1:exon
so has part: feature:232637-232730:-1:exon
so has part: feature:229878-230035:-1:exon
so has part: feature:228912-228979:-1:exon
so has part: feature:228218-228357:-1:exon
so has part: feature:225959-226136:-1:exon
so has part: feature:222604-222686:-1:exon
so has part: feature:221871-221963:-1:exon
so has part: feature:221072-221396:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:237229-237293:-1:exon

position:237229:-1
position: 237229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:232637-232730:-1:exon

position:232637:-1
position: 232637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232730:-1
position: 232730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:229878-230035:-1:exon

position:229878:-1
position: 229878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230035:-1
position: 230035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:228912-228979:-1:exon

position:228912:-1
position: 228912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228979:-1
position: 228979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:228218-228357:-1:exon

position:228218:-1
position: 228218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228357:-1
position: 228357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:225959-226136:-1:exon

position:225959:-1
position: 225959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226136:-1
position: 226136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:222604-222686:-1:exon

position:222604:-1
position: 222604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222686:-1
position: 222686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:221871-221963:-1:exon

position:221871:-1
position: 221871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221963:-1
position: 221963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:221072-221396:-1:exon

position:221396:-1
position: 221396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DRAM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: DRAM2
product: DNA damage regulated autophagy modulator 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_015650597.3
SIO_010081: DRAM2
subclass of: SO_0000673
so part of: DRAM2
location: complement(join(221072..221396,221871..221963,222604..222686,225959..226136,228218..228357,228912..228979,229878..230035,232637..232730,237128..237148))
location: region:221072-237148:-1
so has part: feature:237128-237148:-1:exon
so has part: feature:232637-232730:-1:exon
so has part: feature:229878-230035:-1:exon
so has part: feature:228912-228979:-1:exon
so has part: feature:228218-228357:-1:exon
so has part: feature:225959-226136:-1:exon
so has part: feature:222604-222686:-1:exon
so has part: feature:221871-221963:-1:exon
so has part: feature:221072-221396:-1:exon

position:237148:-1
position: 237148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237128-237148:-1:exon

position:237128:-1
position: 237128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:232637-232730:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:229878-230035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:228912-228979:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:228218-228357:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:225959-226136:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:222604-222686:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:221871-221963:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:221072-221396:-1:exon

DRAM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: DRAM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA damage-regulated autophagy modulator protein 2
translation: MWWFQQGLSFLPVALVVWSAASFVFSYITAIVLHHVDPLVPYISDTGTIPPERCLFGIMLNVSTFLGMATTYVRYKQVSALSPGNPRILRLNKLGLTLGWTSCFGLCIIANFQKCILYYIHVLGACLTFGVGSIYMLVQTILSYLMQPELHSKDIFWARLAVFLWSCSSILSMFVSSVVLYSGLYGQNLVQKLHWKPQERGYTPHIISTVSEWSLAFSFLSFFLTYIRDFQKISLQATVSLQGQTLHESPGSFRAEEQALLIAGSI
SIO_010081: DRAM2
subclass of: SO_0000673
so part of: DRAM2
location: complement(join(221289..221396,221871..221963,222604..222686,225959..226136,228218..228357,228912..228979,229878..230008))
location: region:221289-230008:-1
so has part: feature:229878-230008:-1:exon
so has part: feature:228912-228979:-1:exon
so has part: feature:228218-228357:-1:exon
so has part: feature:225959-226136:-1:exon
so has part: feature:222604-222686:-1:exon
so has part: feature:221871-221963:-1:exon
so has part: feature:221289-221396:-1:exon

XP_015506082.1
type: Protein
SIO_000068: ncbiprotein

position:221289:-1
position: 221289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230008:-1
position: 230008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229878-230008:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:228912-228979:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:228218-228357:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:225959-226136:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:222604-222686:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:221871-221963:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:221289-221396:-1:exon

DRAM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: DRAM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA damage-regulated autophagy modulator protein 2
translation: MWWFQQGLSFLPVALVVWSAASFVFSYITAIVLHHVDPLVPYISDTGTIPPERCLFGIMLNVSTFLGMATTYVRYKQVSALSPGNPRILRLNKLGLTLGWTSCFGLCIIANFQKCILYYIHVLGACLTFGVGSIYMLVQTILSYLMQPELHSKDIFWARLAVFLWSCSSILSMFVSSVVLYSGLYGQNLVQKLHWKPQERGYTPHIISTVSEWSLAFSFLSFFLTYIRDFQKISLQATVSLQGQTLHESPGSFRAEEQALLIAGSI
SIO_010081: DRAM2
subclass of: SO_0000673
so part of: DRAM2
location: complement(join(221289..221396,221871..221963,222604..222686,225959..226136,228218..228357,228912..228979,229878..230008))
location: region:221289-230008:-1
so has part: feature:229878-230008:-1:exon
so has part: feature:228912-228979:-1:exon
so has part: feature:228218-228357:-1:exon
so has part: feature:225959-226136:-1:exon
so has part: feature:222604-222686:-1:exon
so has part: feature:221871-221963:-1:exon
so has part: feature:221289-221396:-1:exon

XP_015506083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:229878-230008:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:228912-228979:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:228218-228357:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:225959-226136:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:222604-222686:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:221871-221963:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:221289-221396:-1:exon

CEPT1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: CEPT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 236127..268262
location: region:236127-268262:1
so has part: feature:236127-268262:1:exon
subclass of: SO_0000010

107214859
type: Gene
SIO_000068: ncbigene

position:236127:1
position: 236127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268262:1
position: 268262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236127-268262:1:exon

CEPT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: CEPT1
product: choline/ethanolamine phosphotransferase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 18 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_015650594.3
SIO_010081: CEPT1
subclass of: SO_0000673
so part of: CEPT1
location: join(236127..236245,238822..239222,242459..242606,243655..243796,259004..259088,263675..263806,264494..264652,265774..265899,267475..268262)
location: region:236127-268262:1
so has part: feature:236127-236245:1:exon
so has part: feature:238822-239222:1:exon
so has part: feature:242459-242606:1:exon
so has part: feature:243655-243796:1:exon
so has part: feature:259004-259088:1:exon
so has part: feature:263675-263806:1:exon
so has part: feature:264494-264652:1:exon
so has part: feature:265774-265899:1:exon
so has part: feature:267475-268262:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:236127-236245:1:exon

position:236245:1
position: 236245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:238822-239222:1:exon

position:238822:1
position: 238822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239222:1
position: 239222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:242459-242606:1:exon

position:242459:1
position: 242459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242606:1
position: 242606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:243655-243796:1:exon

position:243655:1
position: 243655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243796:1
position: 243796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:259004-259088:1:exon

position:259004:1
position: 259004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259088:1
position: 259088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:263675-263806:1:exon

position:263675:1
position: 263675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263806:1
position: 263806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:264494-264652:1:exon

position:264494:1
position: 264494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264652:1
position: 264652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:265774-265899:1:exon

position:265774:1
position: 265774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265899:1
position: 265899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:267475-268262:1:exon

position:267475:1
position: 267475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CEPT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: CEPT1
product: choline/ethanolamine phosphotransferase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_015650595.1
SIO_010081: CEPT1
subclass of: SO_0000673
so part of: CEPT1
location: join(237273..237353,238822..239222,242459..242606,243655..243796,251133..251217,263675..263806,264494..264652,265774..265899,267475..268262)
location: region:237273-268262:1
so has part: feature:237273-237353:1:exon
so has part: feature:238822-239222:1:exon
so has part: feature:242459-242606:1:exon
so has part: feature:243655-243796:1:exon
so has part: feature:251133-251217:1:exon
so has part: feature:263675-263806:1:exon
so has part: feature:264494-264652:1:exon
so has part: feature:265774-265899:1:exon
so has part: feature:267475-268262:1:exon

position:237273:1
position: 237273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237273-237353:1:exon

position:237353:1
position: 237353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:238822-239222:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242459-242606:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:243655-243796:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:251133-251217:1:exon

position:251133:1
position: 251133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251217:1
position: 251217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:263675-263806:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:264494-264652:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:265774-265899:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:267475-268262:1:exon

CEPT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: CEPT1
product: choline/ethanolamine phosphotransferase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 21 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_015650593.2
SIO_010081: CEPT1
subclass of: SO_0000673
so part of: CEPT1
location: join(237273..237353,238822..239222,242459..242606,243655..243796,259004..259088,263675..263806,264494..264652,265774..265899,267475..268262)
location: region:237273-268262:1
so has part: feature:237273-237353:1:exon
so has part: feature:238822-239222:1:exon
so has part: feature:242459-242606:1:exon
so has part: feature:243655-243796:1:exon
so has part: feature:259004-259088:1:exon
so has part: feature:263675-263806:1:exon
so has part: feature:264494-264652:1:exon
so has part: feature:265774-265899:1:exon
so has part: feature:267475-268262:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:237273-237353:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:238822-239222:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242459-242606:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:243655-243796:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:259004-259088:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:263675-263806:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:264494-264652:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:265774-265899:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:267475-268262:1:exon

CEPT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: CEPT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: choline/ethanolaminephosphotransferase 1 isoform X2
translation: MSGQRSIKRRCGESHLEGPTGCGHGPSAACVLSKLVQLPTPPLSKHQLKRLEEHKYQSAGRSLLEPLMQGYWEWLVGRVPAWIAPNLITIIGLLINIFTTLLLVCYCPTATEQAPPWAYIACACGLFIYQSLDAIDGKQARRTNSSTPLGELFDHGCDSLSTVFVVLGTCIAVQLGTNPDWMFFCCFAGTFMFYCAHWQTYVSGTLRFGIFDVTESMLCTVAIQLLTGTLGPCFWNRTIPILNIQVKIFPALCTVAGTIFSCTNYFGVIFTGGVGKNGSTIAGTSVLSPFLHIGSVIALAAMIYKKSAVQLFERHPCLYILTFGFVSAKITNKLVVAHMTKSEMYLYDTAFIGPALLFLDQYFNSFIDEYIVLWIALMLSLLDLLRYCVSVCTQIAAHLHIHVFRIQGCPSHSNHH
SIO_010081: CEPT1
subclass of: SO_0000673
so part of: CEPT1
location: join(238884..239222,242459..242606,243655..243796,251133..251217,263675..263806,264494..264652,265774..265899,267475..267594)
location: region:238884-267594:1
so has part: feature:238884-239222:1:exon
so has part: feature:242459-242606:1:exon
so has part: feature:243655-243796:1:exon
so has part: feature:251133-251217:1:exon
so has part: feature:263675-263806:1:exon
so has part: feature:264494-264652:1:exon
so has part: feature:265774-265899:1:exon
so has part: feature:267475-267594:1:exon

XP_015506081.1
type: Protein
SIO_000068: ncbiprotein

position:238884:1
position: 238884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267594:1
position: 267594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238884-239222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242459-242606:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:243655-243796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251133-251217:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:263675-263806:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:264494-264652:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:265774-265899:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:267475-267594:1:exon

CEPT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: CEPT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: choline/ethanolaminephosphotransferase 1 isoform X1
translation: MSGQRSIKRRCGESHLEGPTGCGHGPSAACVLSKLVQLPTPPLSKHQLKRLEEHKYQSAGRSLLEPLMQGYWEWLVGRVPAWIAPNLITIIGLLINIFTTLLLVCYCPTATEQAPPWAYIACACGLFIYQSLDAIDGKQARRTNSSTPLGELFDHGCDSLSTVFVVLGTCIAVQLGTNPDWMFFCCFAGTFMFYCAHWQTYVSGTLRFGIIDVTEVQIFIIIMHLLAVIGGPPFWQSLIPILNIQVKIFPALCTVAGTIFSCTNYFGVIFTGGVGKNGSTIAGTSVLSPFLHIGSVIALAAMIYKKSAVQLFERHPCLYILTFGFVSAKITNKLVVAHMTKSEMYLYDTAFIGPALLFLDQYFNSFIDEYIVLWIALMLSLLDLLRYCVSVCTQIAAHLHIHVFRIQGCPSHSNHH
SIO_010081: CEPT1
subclass of: SO_0000673
so part of: CEPT1
location: join(238884..239222,242459..242606,243655..243796,259004..259088,263675..263806,264494..264652,265774..265899,267475..267594)
location: region:238884-267594:1
so has part: feature:238884-239222:1:exon
so has part: feature:242459-242606:1:exon
so has part: feature:243655-243796:1:exon
so has part: feature:259004-259088:1:exon
so has part: feature:263675-263806:1:exon
so has part: feature:264494-264652:1:exon
so has part: feature:265774-265899:1:exon
so has part: feature:267475-267594:1:exon

XP_015506079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:238884-239222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242459-242606:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:243655-243796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:259004-259088:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:263675-263806:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:264494-264652:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:265774-265899:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:267475-267594:1:exon

CEPT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: CEPT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: choline/ethanolaminephosphotransferase 1 isoform X1
translation: MSGQRSIKRRCGESHLEGPTGCGHGPSAACVLSKLVQLPTPPLSKHQLKRLEEHKYQSAGRSLLEPLMQGYWEWLVGRVPAWIAPNLITIIGLLINIFTTLLLVCYCPTATEQAPPWAYIACACGLFIYQSLDAIDGKQARRTNSSTPLGELFDHGCDSLSTVFVVLGTCIAVQLGTNPDWMFFCCFAGTFMFYCAHWQTYVSGTLRFGIIDVTEVQIFIIIMHLLAVIGGPPFWQSLIPILNIQVKIFPALCTVAGTIFSCTNYFGVIFTGGVGKNGSTIAGTSVLSPFLHIGSVIALAAMIYKKSAVQLFERHPCLYILTFGFVSAKITNKLVVAHMTKSEMYLYDTAFIGPALLFLDQYFNSFIDEYIVLWIALMLSLLDLLRYCVSVCTQIAAHLHIHVFRIQGCPSHSNHH
SIO_010081: CEPT1
subclass of: SO_0000673
so part of: CEPT1
location: join(238884..239222,242459..242606,243655..243796,259004..259088,263675..263806,264494..264652,265774..265899,267475..267594)
location: region:238884-267594:1
so has part: feature:238884-239222:1:exon
so has part: feature:242459-242606:1:exon
so has part: feature:243655-243796:1:exon
so has part: feature:259004-259088:1:exon
so has part: feature:263675-263806:1:exon
so has part: feature:264494-264652:1:exon
so has part: feature:265774-265899:1:exon
so has part: feature:267475-267594:1:exon

XP_015506080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:238884-239222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242459-242606:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:243655-243796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:259004-259088:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:263675-263806:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:264494-264652:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:265774-265899:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:267475-267594:1:exon

DENND2D
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: DENND2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(272246..284478)
location: region:272246-284478:-1
so has part: feature:272246-284478:-1:exon
subclass of: SO_0000010

107214858
type: Gene
SIO_000068: ncbigene

position:272246:-1
position: 272246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284478:-1
position: 284478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272246-284478:-1:exon

DENND2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: DENND2D
product: DENN domain containing 2D, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_033519861.1
SIO_010081: DENND2D
subclass of: SO_0000673
so part of: DENND2D
location: complement(join(272246..272718,273294..273533,273936..274026,275122..275299,275431..275579,277482..277622,277712..277789,278848..278917,279032..279144,279571..279755,282864..284478))
location: region:272246-284478:-1
so has part: feature:282864-284478:-1:exon
so has part: feature:279571-279755:-1:exon
so has part: feature:279032-279144:-1:exon
so has part: feature:278848-278917:-1:exon
so has part: feature:277712-277789:-1:exon
so has part: feature:277482-277622:-1:exon
so has part: feature:275431-275579:-1:exon
so has part: feature:275122-275299:-1:exon
so has part: feature:273936-274026:-1:exon
so has part: feature:273294-273533:-1:exon
so has part: feature:272246-272718:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:282864-284478:-1:exon

position:282864:-1
position: 282864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:279571-279755:-1:exon

position:279571:-1
position: 279571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279755:-1
position: 279755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:279032-279144:-1:exon

position:279032:-1
position: 279032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279144:-1
position: 279144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:278848-278917:-1:exon

position:278848:-1
position: 278848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278917:-1
position: 278917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:277712-277789:-1:exon

position:277712:-1
position: 277712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277789:-1
position: 277789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:277482-277622:-1:exon

position:277482:-1
position: 277482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277622:-1
position: 277622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:275431-275579:-1:exon

position:275431:-1
position: 275431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275579:-1
position: 275579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:275122-275299:-1:exon

position:275122:-1
position: 275122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275299:-1
position: 275299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:273936-274026:-1:exon

position:273936:-1
position: 273936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274026:-1
position: 274026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:273294-273533:-1:exon

position:273294:-1
position: 273294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273533:-1
position: 273533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:272246-272718:-1:exon

position:272718:-1
position: 272718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DENND2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: DENND2D
product: DENN domain containing 2D, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_015650592.3
SIO_010081: DENND2D
subclass of: SO_0000673
so part of: DENND2D
location: complement(join(272246..272718,273294..273533,273936..274026,274642..274683,275122..275299,275431..275579,277482..277622,277712..277789,278848..278917,279032..279144,279571..279755,282864..284291))
location: region:272246-284291:-1
so has part: feature:282864-284291:-1:exon
so has part: feature:279571-279755:-1:exon
so has part: feature:279032-279144:-1:exon
so has part: feature:278848-278917:-1:exon
so has part: feature:277712-277789:-1:exon
so has part: feature:277482-277622:-1:exon
so has part: feature:275431-275579:-1:exon
so has part: feature:275122-275299:-1:exon
so has part: feature:274642-274683:-1:exon
so has part: feature:273936-274026:-1:exon
so has part: feature:273294-273533:-1:exon
so has part: feature:272246-272718:-1:exon

position:284291:-1
position: 284291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282864-284291:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:279571-279755:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279032-279144:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278848-278917:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277712-277789:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:277482-277622:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:275431-275579:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:275122-275299:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:274642-274683:-1:exon

position:274642:-1
position: 274642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274683:-1
position: 274683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:273936-274026:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:273294-273533:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:272246-272718:-1:exon

DENND2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: DENND2D
product: DENN domain containing 2D, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019009006.2
SIO_010081: DENND2D
subclass of: SO_0000673
so part of: DENND2D
location: complement(join(272246..272718,273294..273533,273936..274026,274642..274683,275122..275299,275431..275579,277482..277622,277712..277789,278848..278917,279032..279144,279571..279755,284005..284077))
location: region:272246-284077:-1
so has part: feature:284005-284077:-1:exon
so has part: feature:279571-279755:-1:exon
so has part: feature:279032-279144:-1:exon
so has part: feature:278848-278917:-1:exon
so has part: feature:277712-277789:-1:exon
so has part: feature:277482-277622:-1:exon
so has part: feature:275431-275579:-1:exon
so has part: feature:275122-275299:-1:exon
so has part: feature:274642-274683:-1:exon
so has part: feature:273936-274026:-1:exon
so has part: feature:273294-273533:-1:exon
so has part: feature:272246-272718:-1:exon

position:284077:-1
position: 284077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284005-284077:-1:exon

position:284005:-1
position: 284005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:279571-279755:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279032-279144:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278848-278917:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277712-277789:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:277482-277622:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:275431-275579:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:275122-275299:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:274642-274683:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273936-274026:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:273294-273533:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:272246-272718:-1:exon

DENND2D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: DENND2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 2D isoform X3
translation: MKYGGVTGAGDGLAPCDTAEGKDGASAAENATPQVPQGKLGERSSLFCSAGQFFFEYLVVVSLKKTPDGHYEPKITYQFPKRENLLKGQKEEEERLLQAIPLFCFPDGNNWLPVTEFSSETFSFVLTNVDGSRKIGYCRRLLPSGRGVRLPEVFCIISCLGCFGLFSKILDEVEKRRQISMAVIYPFMQGLRESPFPAPGKTVTVKSFIPESGTELIELTRPVDAHLEHVEFQALLQRLSPHLILHIFASATLERRLIFLAEELSVLSQCIHAVAALLYPFTWAHTYIPVVPECLLDTVCCPTPFMVGIQMRHLQRVLEQPMEEALIVDLCEGKIIRAVGDEEEILPGKLQNEMLTSLNRHNNNNNEHTSEQLNALVSEAFVHFFVRLLGHYSSHIKWGRSGSGSFQERAFCKAIPSKSCRRFLKKFVKTNMFSLFIEEAEKSRIPQEAYFQQKIKEYHEQKKHRRDS
SIO_010081: DENND2D
subclass of: SO_0000673
so part of: DENND2D
location: complement(join(272657..272718,273294..273533,273936..274026,274642..274683,275122..275299,275431..275579,277482..277622,277712..277789,278848..278917,279032..279144,279571..279755,284005..284062))
location: region:272657-284062:-1
so has part: feature:284005-284062:-1:exon
so has part: feature:279571-279755:-1:exon
so has part: feature:279032-279144:-1:exon
so has part: feature:278848-278917:-1:exon
so has part: feature:277712-277789:-1:exon
so has part: feature:277482-277622:-1:exon
so has part: feature:275431-275579:-1:exon
so has part: feature:275122-275299:-1:exon
so has part: feature:274642-274683:-1:exon
so has part: feature:273936-274026:-1:exon
so has part: feature:273294-273533:-1:exon
so has part: feature:272657-272718:-1:exon

XP_018864551.1
type: Protein
SIO_000068: ncbiprotein

position:272657:-1
position: 272657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284062:-1
position: 284062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284005-284062:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:279571-279755:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279032-279144:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278848-278917:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277712-277789:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:277482-277622:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:275431-275579:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:275122-275299:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:274642-274683:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273936-274026:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:273294-273533:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:272657-272718:-1:exon

DENND2D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: DENND2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 2D isoform X2
translation: MPAGPPCPFFPVSRVTRCLNVPSPRRCPALPGVALCPLLLLPTPCRPSSLGKAKARRAEAEPSPGPVWAAPGPHRDCTGTVPGPHRDRAGTVLGPCRDLTGTAPGPCRDRTGTAPGPCRDRAGTTMASISSFLRRSLRRAGRREGKDGASAAENATPQVPQGKLGERSSLFCSAGQFFFEYLVVVSLKKTPDGHYEPKITYQFPKRENLLKGQKEEEERLLQAIPLFCFPDGNNWLPVTEFSSETFSFVLTNVDGSRKIGYCRRLLPSGRGVRLPEVFCIISCLGCFGLFSKILDEVEKRRQISMAVIYPFMQGLRESPFPAPGKTVTVKSFIPESGTELIELTRPVDAHLEHVEFQALLQRLSPHLILHIFASATLERRLIFLAEELSVLSQCIHAVAALLYPFTWAHTYIPVVPECLLDTVCCPTPFMVGIQMRHLQRVLEQPMEEVGDEEEILPGKLQNEMLTSLNRHNNNNNEHTSEQLNALVSEAFVHFFVRLLGHYSSHIKWGRSGSGSFQERAFCKAIPSKSCRRFLKKFVKTNMFSLFIEEAEKSRIPQEAYFQQKIKEYHEQKKHRRDS
SIO_010081: DENND2D
subclass of: SO_0000673
so part of: DENND2D
location: complement(join(272657..272718,273294..273533,273936..274026,275122..275299,275431..275579,277482..277622,277712..277789,278848..278917,279032..279144,279571..279755,282864..283293))
location: region:272657-283293:-1
so has part: feature:282864-283293:-1:exon
so has part: feature:279571-279755:-1:exon
so has part: feature:279032-279144:-1:exon
so has part: feature:278848-278917:-1:exon
so has part: feature:277712-277789:-1:exon
so has part: feature:277482-277622:-1:exon
so has part: feature:275431-275579:-1:exon
so has part: feature:275122-275299:-1:exon
so has part: feature:273936-274026:-1:exon
so has part: feature:273294-273533:-1:exon
so has part: feature:272657-272718:-1:exon

XP_033375752.1
type: Protein
SIO_000068: ncbiprotein

position:283293:-1
position: 283293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282864-283293:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:279571-279755:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279032-279144:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278848-278917:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277712-277789:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:277482-277622:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:275431-275579:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:275122-275299:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:273936-274026:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273294-273533:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:272657-272718:-1:exon

DENND2D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: DENND2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 2D isoform X1
translation: MPAGPPCPFFPVSRVTRCLNVPSPRRCPALPGVALCPLLLLPTPCRPSSLGKAKARRAEAEPSPGPVWAAPGPHRDCTGTVPGPHRDRAGTVLGPCRDLTGTAPGPCRDRTGTAPGPCRDRAGTTMASISSFLRRSLRRAGRREGKDGASAAENATPQVPQGKLGERSSLFCSAGQFFFEYLVVVSLKKTPDGHYEPKITYQFPKRENLLKGQKEEEERLLQAIPLFCFPDGNNWLPVTEFSSETFSFVLTNVDGSRKIGYCRRLLPSGRGVRLPEVFCIISCLGCFGLFSKILDEVEKRRQISMAVIYPFMQGLRESPFPAPGKTVTVKSFIPESGTELIELTRPVDAHLEHVEFQALLQRLSPHLILHIFASATLERRLIFLAEELSVLSQCIHAVAALLYPFTWAHTYIPVVPECLLDTVCCPTPFMVGIQMRHLQRVLEQPMEEALIVDLCEGKIIRAVGDEEEILPGKLQNEMLTSLNRHNNNNNEHTSEQLNALVSEAFVHFFVRLLGHYSSHIKWGRSGSGSFQERAFCKAIPSKSCRRFLKKFVKTNMFSLFIEEAEKSRIPQEAYFQQKIKEYHEQKKHRRDS
SIO_010081: DENND2D
subclass of: SO_0000673
so part of: DENND2D
location: complement(join(272657..272718,273294..273533,273936..274026,274642..274683,275122..275299,275431..275579,277482..277622,277712..277789,278848..278917,279032..279144,279571..279755,282864..283293))
location: region:272657-283293:-1
so has part: feature:282864-283293:-1:exon
so has part: feature:279571-279755:-1:exon
so has part: feature:279032-279144:-1:exon
so has part: feature:278848-278917:-1:exon
so has part: feature:277712-277789:-1:exon
so has part: feature:277482-277622:-1:exon
so has part: feature:275431-275579:-1:exon
so has part: feature:275122-275299:-1:exon
so has part: feature:274642-274683:-1:exon
so has part: feature:273936-274026:-1:exon
so has part: feature:273294-273533:-1:exon
so has part: feature:272657-272718:-1:exon

XP_015506078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:282864-283293:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:279571-279755:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279032-279144:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278848-278917:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277712-277789:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:277482-277622:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:275431-275579:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:275122-275299:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:274642-274683:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273936-274026:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:273294-273533:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:272657-272718:-1:exon

LOC107214861
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107214861
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 283159..288231
location: region:283159-288231:1
so has part: feature:283159-288231:1:exon
subclass of: SO_0000011

107214861
type: Gene
SIO_000068: ncbigene

position:283159:1
position: 283159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288231:1
position: 288231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283159-288231:1:exon

LOC107214861
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC107214861
product: uncharacterized LOC107214861
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XR_001525027.1
SIO_010081: LOC107214861
subclass of: SO_0000673
so part of: LOC107214861
location: join(283159..283246,287177..288231)
location: region:283159-288231:1
so has part: feature:283159-283246:1:exon
so has part: feature:287177-288231:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:283159-283246:1:exon

position:283246:1
position: 283246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:287177-288231:1:exon

position:287177:1
position: 287177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MYBPH
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: MYBPH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 297191..308263
location: region:297191-308263:1
so has part: feature:297191-308263:1:exon
subclass of: SO_0000010

107214740
type: Gene
SIO_000068: ncbigene

position:297191:1
position: 297191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308263:1
position: 308263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297191-308263:1:exon

MYBPH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: MYBPH
product: myosin binding protein H
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_015650391.3
SIO_010081: MYBPH
subclass of: SO_0000673
so part of: MYBPH
location: join(297191..297771,297964..298098,300108..300275,302641..302729,303660..303855,304185..304324,304469..304628,305364..305500,305897..306083,307715..307756,308026..308263)
location: region:297191-308263:1
so has part: feature:297191-297771:1:exon
so has part: feature:297964-298098:1:exon
so has part: feature:300108-300275:1:exon
so has part: feature:302641-302729:1:exon
so has part: feature:303660-303855:1:exon
so has part: feature:304185-304324:1:exon
so has part: feature:304469-304628:1:exon
so has part: feature:305364-305500:1:exon
so has part: feature:305897-306083:1:exon
so has part: feature:307715-307756:1:exon
so has part: feature:308026-308263:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:297191-297771:1:exon

position:297771:1
position: 297771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:297964-298098:1:exon

position:297964:1
position: 297964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298098:1
position: 298098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:300108-300275:1:exon

position:300108:1
position: 300108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300275:1
position: 300275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:302641-302729:1:exon

position:302641:1
position: 302641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302729:1
position: 302729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:303660-303855:1:exon

position:303660:1
position: 303660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303855:1
position: 303855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:304185-304324:1:exon

position:304185:1
position: 304185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304324:1
position: 304324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:304469-304628:1:exon

position:304469:1
position: 304469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304628:1
position: 304628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:305364-305500:1:exon

position:305364:1
position: 305364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305500:1
position: 305500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:305897-306083:1:exon

position:305897:1
position: 305897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306083:1
position: 306083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:307715-307756:1:exon

position:307715:1
position: 307715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307756:1
position: 307756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:308026-308263:1:exon

position:308026:1
position: 308026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MYBPH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: MYBPH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin-binding protein H
translation: MTGKTAPPAKKPAPAAAKKKAAAAPKEEAAPKEEAAPKEEAAPKEEAAPAPATEEPPAPEHPPEQPPAPTDEPAPVPTEAGAEATPVPAEGSPDPPAEPPAPEPKVEKPKEEPPSCPLSLAVEEVTENSFTLTWKAPEQTGRAGLDGYVVEICKDGSSDWRAVNQEPFLSTRYTIPELSSGDKVHVRVTAVSASGASVPATLEQPVLIREILQLPKIRMPRYLRETYIRRVGDAVNIMIPFQGKPQPEVSWSKGGQPLDTKRINIRNTARDTIFYIRQAQRGDSGKYELTVQINGAEDKATLDIQVVEPPGPPQNLKLVDVWGFNVALEWTPPVDNGNSEIKGYRVQKSDKKSGKWFTVLERCTRTSCTISDLIIGNTYSFRVFSENICGLSDSAAIASGVAYIEKTKTTYQPEKIPQRDMMEPPKFTQPLTDRTTTRGYSTHLFCSVRGFPQPKIIWLKNQMEIREDPKYIALIDQGVCSLEIRKPGPFDGGVYTCKAVNPLGEASVDCRLDVKVPK
SIO_010081: MYBPH
subclass of: SO_0000673
so part of: MYBPH
location: join(297438..297771,297964..298098,300108..300275,302641..302729,303660..303855,304185..304324,304469..304628,305364..305500,305897..306083,307715..307725)
location: region:297438-307725:1
so has part: feature:297438-297771:1:exon
so has part: feature:297964-298098:1:exon
so has part: feature:300108-300275:1:exon
so has part: feature:302641-302729:1:exon
so has part: feature:303660-303855:1:exon
so has part: feature:304185-304324:1:exon
so has part: feature:304469-304628:1:exon
so has part: feature:305364-305500:1:exon
so has part: feature:305897-306083:1:exon
so has part: feature:307715-307725:1:exon

XP_015505877.1
type: Protein
SIO_000068: ncbiprotein

position:297438:1
position: 297438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307725:1
position: 307725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297438-297771:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297964-298098:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:300108-300275:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:302641-302729:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:303660-303855:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:304185-304324:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:304469-304628:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:305364-305500:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:305897-306083:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:307715-307725:1:exon

LOC107215040
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107215040
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(311426..338403)
location: region:311426-338403:-1
so has part: feature:311426-338403:-1:exon
subclass of: SO_0000010

107215040
type: Gene
SIO_000068: ncbigene

position:311426:-1
position: 311426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338403:-1
position: 338403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311426-338403:-1:exon

LOC107215040
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107215040
product: adenosine receptor A1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 ESTs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_015650975.2
SIO_010081: LOC107215040
subclass of: SO_0000673
so part of: LOC107215040
location: complement(join(311426..312397,336685..337067,337996..338403))
location: region:311426-338403:-1
so has part: feature:337996-338403:-1:exon
so has part: feature:336685-337067:-1:exon
so has part: feature:311426-312397:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:337996-338403:-1:exon

position:337996:-1
position: 337996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:336685-337067:-1:exon

position:336685:-1
position: 336685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337067:-1
position: 337067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:311426-312397:-1:exon

position:312397:-1
position: 312397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107215040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107215040
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenosine receptor A1
translation: MAHPISAFQAAYISIEVLIALVSVPGNILVIWAVKMNQALRDATFCFIVSLAVADVAVGALVIPLAIIINIGPQTEFYTCLMVACPVLILTESSILALLAIAVDRYLRVKIPVRYKSVVTPRRAAVAIACCWIVSFLVGLTPMFGWNNLNKMQRTQELNGSHTEFVITCQFETVISMEYMVYFNFFVWVLPPLLLMLLIYLEVFNLIRKQLNKKVSSSSNDPQKYYGKELKIAKSLALVLFLFALSWLPLHVLNCITLFCPSCQTPHILTYIAIFLTHGNSAMNPIVYAFRIKKFRTAFLQIWNQYFCCKTNKNATSTTMAETGN
SIO_010081: LOC107215040
subclass of: SO_0000673
so part of: LOC107215040
location: complement(join(311761..312397,336685..337025))
location: region:311761-337025:-1
so has part: feature:336685-337025:-1:exon
so has part: feature:311761-312397:-1:exon

XP_015506461.1
type: Protein
SIO_000068: ncbiprotein

position:311761:-1
position: 311761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337025:-1
position: 337025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336685-337025:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:311761-312397:-1:exon

MYOG
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: MYOG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 350733..356963
location: region:350733-356963:1
so has part: feature:350733-356963:1:exon
subclass of: SO_0000010

107214825
type: Gene
SIO_000068: ncbigene

position:350733:1
position: 350733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356963:1
position: 356963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350733-356963:1:exon

MYOG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: MYOG
product: myogenin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_019009000.2
SIO_010081: MYOG
subclass of: SO_0000673
so part of: MYOG
location: join(350733..351468,356369..356963)
location: region:350733-356963:1
so has part: feature:350733-351468:1:exon
so has part: feature:356369-356963:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:350733-351468:1:exon

position:351468:1
position: 351468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:356369-356963:1:exon

position:356369:1
position: 356369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MYOG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: MYOG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myogenin
translation: MELFETNPYFFPEQRFFDGENFLGSRLQGYEPAAFPERAGAAPGAEGRVAPEEQEALAEHCPGQCLPWACKVCKRKSVSMDRRRAATLREKRRLKKVNEAFEALKRSTLLNPNQRLPKVEILRSAIQYIERLQSLLSSLNQQEREQRDLRFQPAITSWLKRQPRSATSTRCLPSWRALPQGTWP
SIO_010081: MYOG
subclass of: SO_0000673
so part of: MYOG
location: join(351007..351468,356369..356461)
location: region:351007-356461:1
so has part: feature:351007-351468:1:exon
so has part: feature:356369-356461:1:exon

XP_018864545.1
type: Protein
SIO_000068: ncbiprotein

position:351007:1
position: 351007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356461:1
position: 356461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351007-351468:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:356369-356461:1:exon

PPFIA4
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: PPFIA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(357224..421963)
location: region:357224-421963:-1
so has part: feature:357224-421963:-1:exon
subclass of: SO_0000010

107214947
type: Gene
SIO_000068: ncbigene

position:357224:-1
position: 357224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421963:-1
position: 421963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357224-421963:-1:exon

PPFIA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PPFIA4
product: PTPRF interacting protein alpha 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033519891.1
SIO_010081: PPFIA4
subclass of: SO_0000673
so part of: PPFIA4
location: complement(join(357224..358314,358725..358812,360086..360263,360813..360881,361108..361283,361875..361972,362635..362810,363673..363699,365360..365422,366736..366936,367704..367785,368008..368104,368697..368854,368997..369130,369714..369749,369962..370202,370594..370799,371028..371169,373970..374061,375252..375314,377001..377132,377910..377993,378593..378727,378817..378963,379373..379594,380099..380194,381702..381776,382308..382472,382580..382681,390869..392218,421945..421963))
location: region:357224-421963:-1
so has part: feature:421945-421963:-1:exon
so has part: feature:390869-392218:-1:exon
so has part: feature:382580-382681:-1:exon
so has part: feature:382308-382472:-1:exon
so has part: feature:381702-381776:-1:exon
so has part: feature:380099-380194:-1:exon
so has part: feature:379373-379594:-1:exon
so has part: feature:378817-378963:-1:exon
so has part: feature:378593-378727:-1:exon
so has part: feature:377910-377993:-1:exon
so has part: feature:377001-377132:-1:exon
so has part: feature:375252-375314:-1:exon
so has part: feature:373970-374061:-1:exon
so has part: feature:371028-371169:-1:exon
so has part: feature:370594-370799:-1:exon
so has part: feature:369962-370202:-1:exon
so has part: feature:369714-369749:-1:exon
so has part: feature:368997-369130:-1:exon
so has part: feature:368697-368854:-1:exon
so has part: feature:368008-368104:-1:exon
so has part: feature:367704-367785:-1:exon
so has part: feature:366736-366936:-1:exon
so has part: feature:365360-365422:-1:exon
so has part: feature:363673-363699:-1:exon
so has part: feature:362635-362810:-1:exon
so has part: feature:361875-361972:-1:exon
so has part: feature:361108-361283:-1:exon
so has part: feature:360813-360881:-1:exon
so has part: feature:360086-360263:-1:exon
so has part: feature:358725-358812:-1:exon
so has part: feature:357224-358314:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:421945-421963:-1:exon

position:421945:-1
position: 421945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:390869-392218:-1:exon

position:390869:-1
position: 390869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392218:-1
position: 392218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:382580-382681:-1:exon

position:382580:-1
position: 382580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382681:-1
position: 382681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:382308-382472:-1:exon

position:382308:-1
position: 382308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382472:-1
position: 382472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:381702-381776:-1:exon

position:381702:-1
position: 381702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381776:-1
position: 381776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:380099-380194:-1:exon

position:380099:-1
position: 380099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380194:-1
position: 380194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:379373-379594:-1:exon

position:379373:-1
position: 379373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379594:-1
position: 379594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:378817-378963:-1:exon

position:378817:-1
position: 378817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378963:-1
position: 378963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:378593-378727:-1:exon

position:378593:-1
position: 378593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378727:-1
position: 378727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:377910-377993:-1:exon

position:377910:-1
position: 377910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:377993:-1
position: 377993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:377001-377132:-1:exon

position:377001:-1
position: 377001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:377132:-1
position: 377132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:375252-375314:-1:exon

position:375252:-1
position: 375252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375314:-1
position: 375314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:373970-374061:-1:exon

position:373970:-1
position: 373970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374061:-1
position: 374061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:371028-371169:-1:exon

position:371028:-1
position: 371028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371169:-1
position: 371169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:370594-370799:-1:exon

position:370594:-1
position: 370594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370799:-1
position: 370799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:369962-370202:-1:exon

position:369962:-1
position: 369962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370202:-1
position: 370202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:369714-369749:-1:exon

position:369714:-1
position: 369714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369749:-1
position: 369749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:368997-369130:-1:exon

position:368997:-1
position: 368997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369130:-1
position: 369130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:368697-368854:-1:exon

position:368697:-1
position: 368697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368854:-1
position: 368854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:368008-368104:-1:exon

position:368008:-1
position: 368008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368104:-1
position: 368104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:367704-367785:-1:exon

position:367704:-1
position: 367704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367785:-1
position: 367785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:366736-366936:-1:exon

position:366736:-1
position: 366736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366936:-1
position: 366936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:365360-365422:-1:exon

position:365360:-1
position: 365360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365422:-1
position: 365422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:363673-363699:-1:exon

position:363673:-1
position: 363673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363699:-1
position: 363699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:362635-362810:-1:exon

position:362635:-1
position: 362635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362810:-1
position: 362810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:361875-361972:-1:exon

position:361875:-1
position: 361875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361972:-1
position: 361972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:361108-361283:-1:exon

position:361108:-1
position: 361108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361283:-1
position: 361283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:360813-360881:-1:exon

position:360813:-1
position: 360813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360881:-1
position: 360881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:360086-360263:-1:exon

position:360086:-1
position: 360086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360263:-1
position: 360263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:358725-358812:-1:exon

position:358725:-1
position: 358725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358812:-1
position: 358812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:357224-358314:-1:exon

position:358314:-1
position: 358314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPFIA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PPFIA4
product: PTPRF interacting protein alpha 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033519892.1
SIO_010081: PPFIA4
subclass of: SO_0000673
so part of: PPFIA4
location: complement(join(357224..358314,358725..358812,360086..360263,360813..360881,361108..361283,361875..361972,362635..362810,363673..363699,365360..365422,366736..366936,367704..367785,368008..368104,368697..368854,368997..369130,369714..369749,369962..370202,370594..370799,371028..371169,373970..374061,375252..375314,377001..377132,377910..377993,378593..378727,378817..378963,379373..379594,380099..380194,381702..381776,382308..382472,382580..382681,390869..391452,391544..392218,418260..418301))
location: region:357224-418301:-1
so has part: feature:418260-418301:-1:exon
so has part: feature:391544-392218:-1:exon
so has part: feature:390869-391452:-1:exon
so has part: feature:382580-382681:-1:exon
so has part: feature:382308-382472:-1:exon
so has part: feature:381702-381776:-1:exon
so has part: feature:380099-380194:-1:exon
so has part: feature:379373-379594:-1:exon
so has part: feature:378817-378963:-1:exon
so has part: feature:378593-378727:-1:exon
so has part: feature:377910-377993:-1:exon
so has part: feature:377001-377132:-1:exon
so has part: feature:375252-375314:-1:exon
so has part: feature:373970-374061:-1:exon
so has part: feature:371028-371169:-1:exon
so has part: feature:370594-370799:-1:exon
so has part: feature:369962-370202:-1:exon
so has part: feature:369714-369749:-1:exon
so has part: feature:368997-369130:-1:exon
so has part: feature:368697-368854:-1:exon
so has part: feature:368008-368104:-1:exon
so has part: feature:367704-367785:-1:exon
so has part: feature:366736-366936:-1:exon
so has part: feature:365360-365422:-1:exon
so has part: feature:363673-363699:-1:exon
so has part: feature:362635-362810:-1:exon
so has part: feature:361875-361972:-1:exon
so has part: feature:361108-361283:-1:exon
so has part: feature:360813-360881:-1:exon
so has part: feature:360086-360263:-1:exon
so has part: feature:358725-358812:-1:exon
so has part: feature:357224-358314:-1:exon

position:418301:-1
position: 418301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418260-418301:-1:exon

position:418260:-1
position: 418260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:391544-392218:-1:exon

position:391544:-1
position: 391544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:390869-391452:-1:exon

position:391452:-1
position: 391452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:382580-382681:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:382308-382472:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:381702-381776:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:380099-380194:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:379373-379594:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:378817-378963:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:378593-378727:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:377910-377993:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:377001-377132:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:375252-375314:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:373970-374061:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:371028-371169:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:370594-370799:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:369962-370202:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:369714-369749:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:368997-369130:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:368697-368854:-1:exon

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PPFIA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PPFIA4
product: PTPRF interacting protein alpha 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_015650776.2
SIO_010081: PPFIA4
subclass of: SO_0000673
so part of: PPFIA4
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PPFIA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PPFIA4
product: PTPRF interacting protein alpha 4, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_015650783.2
SIO_010081: PPFIA4
subclass of: SO_0000673
so part of: PPFIA4
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location: region:357224-418301:-1
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PPFIA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PPFIA4
product: PTPRF interacting protein alpha 4, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_015650782.2
SIO_010081: PPFIA4
subclass of: SO_0000673
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PPFIA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PPFIA4
product: PTPRF interacting protein alpha 4, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_015650784.2
SIO_010081: PPFIA4
subclass of: SO_0000673
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PPFIA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PPFIA4
product: PTPRF interacting protein alpha 4, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_015650781.2
SIO_010081: PPFIA4
subclass of: SO_0000673
so part of: PPFIA4
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location: region:357224-418301:-1
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PPFIA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PPFIA4
product: PTPRF interacting protein alpha 4, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_015650780.2
SIO_010081: PPFIA4
subclass of: SO_0000673
so part of: PPFIA4
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location: region:357224-418301:-1
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PPFIA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PPFIA4
product: PTPRF interacting protein alpha 4, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_015650779.2
SIO_010081: PPFIA4
subclass of: SO_0000673
so part of: PPFIA4
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location: region:357224-418301:-1
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PPFIA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PPFIA4
product: PTPRF interacting protein alpha 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_015650777.2
SIO_010081: PPFIA4
subclass of: SO_0000673
so part of: PPFIA4
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urn:…
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SIO_000628: feature:377910-377993:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:377001-377132:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:375252-375314:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:373970-374061:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:371028-371169:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:370594-370799:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:369962-370202:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:369714-369749:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:368997-369130:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:368697-368854:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:368008-368101:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:367704-367785:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:366736-366936:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:365360-365422:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:363673-363699:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:362635-362810:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:361875-361972:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:361108-361283:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:360813-360881:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:360086-360263:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:358725-358812:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:357224-358314:-1:exon

PPFIA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PPFIA4
product: PTPRF interacting protein alpha 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_015650778.2
SIO_010081: PPFIA4
subclass of: SO_0000673
so part of: PPFIA4
location: complement(join(357224..358314,358725..358812,360086..360263,360813..360881,361108..361283,361875..361972,362635..362810,365360..365422,366736..366936,367704..367785,368008..368104,368697..368854,368997..369130,369714..369749,369962..370202,370594..370799,371028..371169,373970..374061,375252..375314,377001..377132,377910..377993,378593..378727,378817..378963,379373..379594,380099..380194,381702..381776,382308..382472,382580..382681,390869..392218,418260..418301))
location: region:357224-418301:-1
so has part: feature:418260-418301:-1:exon
so has part: feature:390869-392218:-1:exon
so has part: feature:382580-382681:-1:exon
so has part: feature:382308-382472:-1:exon
so has part: feature:381702-381776:-1:exon
so has part: feature:380099-380194:-1:exon
so has part: feature:379373-379594:-1:exon
so has part: feature:378817-378963:-1:exon
so has part: feature:378593-378727:-1:exon
so has part: feature:377910-377993:-1:exon
so has part: feature:377001-377132:-1:exon
so has part: feature:375252-375314:-1:exon
so has part: feature:373970-374061:-1:exon
so has part: feature:371028-371169:-1:exon
so has part: feature:370594-370799:-1:exon
so has part: feature:369962-370202:-1:exon
so has part: feature:369714-369749:-1:exon
so has part: feature:368997-369130:-1:exon
so has part: feature:368697-368854:-1:exon
so has part: feature:368008-368104:-1:exon
so has part: feature:367704-367785:-1:exon
so has part: feature:366736-366936:-1:exon
so has part: feature:365360-365422:-1:exon
so has part: feature:362635-362810:-1:exon
so has part: feature:361875-361972:-1:exon
so has part: feature:361108-361283:-1:exon
so has part: feature:360813-360881:-1:exon
so has part: feature:360086-360263:-1:exon
so has part: feature:358725-358812:-1:exon
so has part: feature:357224-358314:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:418260-418301:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390869-392218:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:382580-382681:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:382308-382472:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:381702-381776:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:380099-380194:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:379373-379594:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:378817-378963:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:378593-378727:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:377910-377993:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:377001-377132:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:375252-375314:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:373970-374061:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:371028-371169:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:370594-370799:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:369962-370202:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:369714-369749:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:368997-369130:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:368697-368854:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:368008-368104:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:367704-367785:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:366736-366936:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:365360-365422:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:362635-362810:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:361875-361972:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:361108-361283:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:360813-360881:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:360086-360263:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:358725-358812:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:357224-358314:-1:exon

PPFIA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PPFIA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: liprin-alpha-4 isoform X8
translation: MMCEVMPTISEGDPLGPPQGSEADADFEQLMVNMLDERDKLLDTLRETRETLAVTQSRLQETLRERDQLQRQLNSALPQEFATLTRELSTCREQLLEREEEISELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRAALERVATLEEQLVDAHRQVAALQQGSAREPAAGEREEREPKEPAPKLPWKRLSNGSVHSDDEAGRVVELQELLEKQNFEVVQAKERISALAASVAELEEDLGTARKDLIKSEEMSSKYQRDLREALAQKEDMEERITTLEKRYLAAQREATSIHDLNDKLENELANKESLHRQCEEKARHLQELLELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGSIEEHLRQLEAQLEEKNQELARARQREKMNEEHNKRLSDTVDRLLSESNERLQLHLKERMAALEEKRRLSDEIDKLRLEVDQLKTRSGTFVESVHTRSHMGSATDLRFPLGAVVHAPAEPFGAAPGLPRAQKGRFGARREEPAKDWEQAQAGGVLATGPHAFDSDPDISDMDEDDRETLFSSMDVLSPGGHSDAQTLAMMLQEQLDAINEEIRMIQEEKESTELRAEELETRVTSGSMEGLNLTQLCKRASIPTSLTALSLASSSPPLSGRSTPKLSSRSAAQDLDRMGIMTLPSDLRKHRRKLLSPAARDESREDKTTIKCETSPPSSPRALRLEKLGHPALSQEDGKSSLEEQASNPSSSQDSLHKGSKRKGIKSSIGRLFGKKEKGRLIQLSREGATGQVLLTDVEGGIQDPLGLGKLGAQAEKDRRLRKKHELLEEARRKGLPFAHWDGPTVVSWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNALHRLKLRLAIQEMVSLTSPSAPPTSRTSSGNVWVTHEEMENMATSTKTDTEEGSWAQTLAYGDMNHEWVGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRVHLKMVDSFHRTSLQYGIMCLKRLNYDRKELERRREETQHEIKDVLVWTNDQVIHWIQSIGLREYGNNLVESGVHGALLALDENFDHNSLALVLQIPTQNTQARQVLEREFNNLLALGTDRRLDDGDDKTFRRTPSWRKRFRPRDVHSINLLSGSAETLPAGFRVTSLVPLPPPAPPAKKMPPEVGASGSPRLETSTVRTYSC
SIO_010081: PPFIA4
subclass of: SO_0000673
so part of: PPFIA4
location: complement(join(358754..358812,360086..360263,360813..360881,361108..361283,361875..361972,362635..362810,363673..363699,365360..365422,366736..366936,367704..367785,368008..368101,368697..368854,368997..369130,369714..369749,369962..370202,370594..370799,371028..371169,373970..374061,377001..377132,377910..377993,378593..378727,378817..378963,379373..379594,380099..380194,381702..381776,382308..382472,382580..382681,390869..391105))
location: region:358754-391105:-1
so has part: feature:390869-391105:-1:exon
so has part: feature:382580-382681:-1:exon
so has part: feature:382308-382472:-1:exon
so has part: feature:381702-381776:-1:exon
so has part: feature:380099-380194:-1:exon
so has part: feature:379373-379594:-1:exon
so has part: feature:378817-378963:-1:exon
so has part: feature:378593-378727:-1:exon
so has part: feature:377910-377993:-1:exon
so has part: feature:377001-377132:-1:exon
so has part: feature:373970-374061:-1:exon
so has part: feature:371028-371169:-1:exon
so has part: feature:370594-370799:-1:exon
so has part: feature:369962-370202:-1:exon
so has part: feature:369714-369749:-1:exon
so has part: feature:368997-369130:-1:exon
so has part: feature:368697-368854:-1:exon
so has part: feature:368008-368101:-1:exon
so has part: feature:367704-367785:-1:exon
so has part: feature:366736-366936:-1:exon
so has part: feature:365360-365422:-1:exon
so has part: feature:363673-363699:-1:exon
so has part: feature:362635-362810:-1:exon
so has part: feature:361875-361972:-1:exon
so has part: feature:361108-361283:-1:exon
so has part: feature:360813-360881:-1:exon
so has part: feature:360086-360263:-1:exon
so has part: feature:358754-358812:-1:exon

XP_015506269.1
type: Protein
SIO_000068: ncbiprotein

position:358754:-1
position: 358754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:391105:-1
position: 391105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390869-391105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382580-382681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:382308-382472:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:381702-381776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:380099-380194:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379373-379594:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:378817-378963:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:378593-378727:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:377910-377993:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:377001-377132:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:373970-374061:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:371028-371169:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:370594-370799:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:369962-370202:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:369714-369749:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:368997-369130:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:368697-368854:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:368008-368101:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:367704-367785:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:366736-366936:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:365360-365422:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:363673-363699:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:362635-362810:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:361875-361972:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:361108-361283:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:360813-360881:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:360086-360263:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:358754-358812:-1:exon

PPFIA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PPFIA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: liprin-alpha-4 isoform X7
translation: MMCEVMPTISEGDPLGPPQGSEADADFEQLMVNMLDERDKLLDTLRETRETLAVTQSRLQETLRERDQLQRQLNSALPQEFATLTRELSTCREQLLEREEEISELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRAALERVATLEEQLVDAHRQVAALQQGSAREPAAGEREEREPKEPAPKLPWKRLSNGSVHSDDEAGRVVELQELLEKQNFEVVQAKERISALAASVAELEEDLGTARKDLIKSEEMSSKYQRDLREALAQKEDMEERITTLEKRYLAAQREATSIHDLNDKLENELANKESLHRQCEEKARHLQELLELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGSIEEHLRQLEAQLEEKNQELARARQREKMNEEHNKRLSDTVDRLLSESNERLQLHLKERMAALEEKRRLSDEIDKLRLEVDQLKTRSGTFVESVHTRSHMGSATDLRFPLGAVVHAPAEPFGAAPGLPRAQKGRFGARREEPAKDWEQAQAGGVLATGPHAFDSDPDISDMDEDDRETLFSSMDVLSPGGHSDAQTLAMMLQEQLDAINEEIRMIQEEKESTELRAEELETRVTSGSMEGLNLTQLCKRASIPTSLTALSLASSSPPLSGRSTPKLSSRSAAQDLDRMGIMTLPSDLRKHRRKLLSPAARDESREDKTTIKCETSPPSSPRALRLEKLGHPALSQEDGKSSLEEQASNPSSSQDSLHKGSKRKGIKSSIGRLFGKKEKGRLIQLSREGATGQAVLLTDVEGGIQDPLGLGKLGAQAEKDRRLRKKHELLEEARRKGLPFAHWDGPTVVSWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNALHRLKLRLAIQEMVSLTSPSAPPTSRTSSGNVWVTHEEMENMATSTKTDTEEGSWAQTLAYGDMNHEWVGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRVHLKMVDSFHRTSLQYGIMCLKRLNYDRKELERRREETQHEIKDVLVWTNDQVIHWIQSIGLREYGNNLVESGVHGALLALDENFDHNSLALVLQIPTQNTQARQVLEREFNNLLALGTDRRLDDGDDKTFRRTPSWRKRFRPRDVHSINLLSGSAETLPAGFRVTSLVPLPPPAPPAKKMPPEVGASGSPRLETSTVRTYSC
SIO_010081: PPFIA4
subclass of: SO_0000673
so part of: PPFIA4
location: complement(join(358754..358812,360086..360263,360813..360881,361108..361283,361875..361972,362635..362810,363673..363699,365360..365422,366736..366936,367704..367785,368008..368104,368697..368854,368997..369130,369714..369749,369962..370202,370594..370799,371028..371169,373970..374061,377001..377132,377910..377993,378593..378727,378817..378963,379373..379594,380099..380194,381702..381776,382308..382472,382580..382681,390869..391105))
location: region:358754-391105:-1
so has part: feature:390869-391105:-1:exon
so has part: feature:382580-382681:-1:exon
so has part: feature:382308-382472:-1:exon
so has part: feature:381702-381776:-1:exon
so has part: feature:380099-380194:-1:exon
so has part: feature:379373-379594:-1:exon
so has part: feature:378817-378963:-1:exon
so has part: feature:378593-378727:-1:exon
so has part: feature:377910-377993:-1:exon
so has part: feature:377001-377132:-1:exon
so has part: feature:373970-374061:-1:exon
so has part: feature:371028-371169:-1:exon
so has part: feature:370594-370799:-1:exon
so has part: feature:369962-370202:-1:exon
so has part: feature:369714-369749:-1:exon
so has part: feature:368997-369130:-1:exon
so has part: feature:368697-368854:-1:exon
so has part: feature:368008-368104:-1:exon
so has part: feature:367704-367785:-1:exon
so has part: feature:366736-366936:-1:exon
so has part: feature:365360-365422:-1:exon
so has part: feature:363673-363699:-1:exon
so has part: feature:362635-362810:-1:exon
so has part: feature:361875-361972:-1:exon
so has part: feature:361108-361283:-1:exon
so has part: feature:360813-360881:-1:exon
so has part: feature:360086-360263:-1:exon
so has part: feature:358754-358812:-1:exon

XP_015506268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390869-391105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382580-382681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:382308-382472:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:381702-381776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:380099-380194:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379373-379594:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:378817-378963:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:378593-378727:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:377910-377993:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:377001-377132:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:373970-374061:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:371028-371169:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:370594-370799:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:369962-370202:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:369714-369749:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:368997-369130:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:368697-368854:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:368008-368104:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:367704-367785:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:366736-366936:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:365360-365422:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:363673-363699:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:362635-362810:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:361875-361972:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:361108-361283:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:360813-360881:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:360086-360263:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:358754-358812:-1:exon

PPFIA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PPFIA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: liprin-alpha-4 isoform X9
translation: MMCEVMPTISEGDPLGPPQGSEADADFEQLMVNMLDERDKLLDTLRETRETLAVTQSRLQETLRERDQLQRQLNSALPQEFATLTRELSTCREQLLEREEEISELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRAALERVATLEEQLVDAHRQVAALQQGSAREPAAGEREEREPKEPAPKLPWKRLSNGSVHSDDEAGRVVELQELLEKQNFEVVQAKERISALAASVAELEEDLGTARKDLIKSEEMSSKYQRDLREALAQKEDMEERITTLEKRYLAAQREATSIHDLNDKLENELANKESLHRQCEEKARHLQELLELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGSIEEHLRQLEAQLEEKNQELARARQREKMNEEHNKRLSDTVDRLLSESNERLQLHLKERMAALEEKNTLLQELENTQKQIEEHQHDKRRLSDEIDKLRLEVDQLKTRSGTFVESVHTRSHMGSATDLRFPLGAVVHAPAEPFGAAPGLPRAQKGRFGARREEPAKDWEQAQAGGVLATGPHAFDSDPDISDMDEDDRETLFSSMDVLSPGGHSDAQTLAMMLQEQLDAINEEIRMIQEEKESTELRAEELETRVTSGSMEGLNLTQLCKRASIPTSLTALSLASSSPPLSGRSTPKLSSRSAAQDLDRMGIMTLSPAARDESREDKTTIKCETSPPSSPRALRLEKLGHPALSQEDGKSSLEEQASNPSSSQDSLHKGSKRKGIKSSIGRLFGKKEKGRLIQLSREGATGQVLLTDVEGGIQDPLGLGKLGAQAEKDRRLRKKHELLEEARRKGLPFAHWDGPTVVSWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNALHRLKLRLAIQEMVSLTSPSAPPTSRTSSGNVWVTHEEMENMATSTKTTLAYGDMNHEWVGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRVHLKMVDSFHRTSLQYGIMCLKRLNYDRKELERRREETQHEIKDVLVWTNDQVIHWIQSIGLREYGNNLVESGVHGALLALDENFDHNSLALVLQIPTQNTQARQVLEREFNNLLALGTDRRLDDGDDKTFRRTPSWRKRFRPRDVHSINLLSGSAETLPAGFRVTSLVPLPPPAPPAKKMPPEVGASGSPRLETSTVRTYSC
SIO_010081: PPFIA4
subclass of: SO_0000673
so part of: PPFIA4
location: complement(join(358754..358812,360086..360263,360813..360881,361108..361283,361875..361972,362635..362810,365360..365422,366736..366936,367704..367785,368008..368101,368697..368854,368997..369130,369962..370202,370594..370799,371028..371169,373970..374061,375252..375314,377001..377132,377910..377993,378593..378727,378817..378963,379373..379594,380099..380194,381702..381776,382308..382472,382580..382681,390869..391105))
location: region:358754-391105:-1
so has part: feature:390869-391105:-1:exon
so has part: feature:382580-382681:-1:exon
so has part: feature:382308-382472:-1:exon
so has part: feature:381702-381776:-1:exon
so has part: feature:380099-380194:-1:exon
so has part: feature:379373-379594:-1:exon
so has part: feature:378817-378963:-1:exon
so has part: feature:378593-378727:-1:exon
so has part: feature:377910-377993:-1:exon
so has part: feature:377001-377132:-1:exon
so has part: feature:375252-375314:-1:exon
so has part: feature:373970-374061:-1:exon
so has part: feature:371028-371169:-1:exon
so has part: feature:370594-370799:-1:exon
so has part: feature:369962-370202:-1:exon
so has part: feature:368997-369130:-1:exon
so has part: feature:368697-368854:-1:exon
so has part: feature:368008-368101:-1:exon
so has part: feature:367704-367785:-1:exon
so has part: feature:366736-366936:-1:exon
so has part: feature:365360-365422:-1:exon
so has part: feature:362635-362810:-1:exon
so has part: feature:361875-361972:-1:exon
so has part: feature:361108-361283:-1:exon
so has part: feature:360813-360881:-1:exon
so has part: feature:360086-360263:-1:exon
so has part: feature:358754-358812:-1:exon

XP_015506270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390869-391105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382580-382681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:382308-382472:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:381702-381776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:380099-380194:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379373-379594:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:378817-378963:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:378593-378727:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:377910-377993:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:377001-377132:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:375252-375314:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:373970-374061:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:371028-371169:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:370594-370799:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:369962-370202:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:368997-369130:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:368697-368854:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:368008-368101:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:367704-367785:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:366736-366936:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:365360-365422:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:362635-362810:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:361875-361972:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:361108-361283:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:360813-360881:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:360086-360263:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:358754-358812:-1:exon

PPFIA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PPFIA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: liprin-alpha-4 isoform X6
translation: MMCEVMPTISEGDPLGPPQGSEADADFEQLMVNMLDERDKLLDTLRETRETLAVTQSRLQETLRERDQLQRQLNSALPQEFATLTRELSTCREQLLEREEEISELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRAALERVATLEEQLVDAHRQVAALQQGSAREPAAGEREEREPKEPAPKLPWKRLSNGSVHSDDEAGRVVELQELLEKQNFEVVQAKERISALAASVAELEEDLGTARKDLIKSEEMSSKYQRDLREALAQKEDMEERITTLEKRYLAAQREATSIHDLNDKLENELANKESLHRQCEEKARHLQELLELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGSIEEHLRQLEAQLEEKNQELARARQREKMNEEHNKRLSDTVDRLLSESNERLQLHLKERMAALEEKNTLLQELENTQKQIEEHQHDKRRLSDEIDKLRLEVDQLKTRSGTFVESVHTRSHMGSATDLRFPLGAVVHAPAEPFGAAPGLPRAQKGRFGARREEPAKDWEQAQAGGVLATGPHAFDSDPDISDMDEDDRETLFSSMDVLSPGGHSDAQTLAMMLQEQLDAINEEIRMIQEEKESTELRAEELETRVTSGSMEGLNLTQLCKRASIPTSLTALSLASSSPPLSGRSTPKLSSRSAAQDLDRMGIMTLSPAARDESREDKTTIKCETSPPSSPRALRLEKLGHPALSQEDGKSSLEEQASNPSSSQDSLHKGSKRKGIKSSIGRLFGKKEKGRLIQLSREGATGQVLLTDVEGGIQDPLGLGKLGAQAEKDRRLRKKHELLEEARRKGLPFAHWDGPTVVSWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNALHRLKLRLAIQEMVSLTSPSAPPTSRTSSGNVWVTHEEMENMATSTKTDTEEGSWAQTLAYGDMNHEWVGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRVHLKMVDSFHRTSLQYGIMCLKRLNYDRKELERRREETQHEIKDVLVWTNDQVIHWIQSIGLREYGNNLVESGVHGALLALDENFDHNSLALVLQIPTQNTQARQVLEREFNNLLALGTDRRLDDGDDKTFRRTPSWRKRFRPRDVHSINLLSGSAETLPAGFRVTSLVPLPPPAPPAKKMPPEVGASGSPRLETSTVRTYSC
SIO_010081: PPFIA4
subclass of: SO_0000673
so part of: PPFIA4
location: complement(join(358754..358812,360086..360263,360813..360881,361108..361283,361875..361972,362635..362810,363673..363699,365360..365422,366736..366936,367704..367785,368008..368101,368697..368854,368997..369130,369962..370202,370594..370799,371028..371169,373970..374061,375252..375314,377001..377132,377910..377993,378593..378727,378817..378963,379373..379594,380099..380194,381702..381776,382308..382472,382580..382681,390869..391105))
location: region:358754-391105:-1
so has part: feature:390869-391105:-1:exon
so has part: feature:382580-382681:-1:exon
so has part: feature:382308-382472:-1:exon
so has part: feature:381702-381776:-1:exon
so has part: feature:380099-380194:-1:exon
so has part: feature:379373-379594:-1:exon
so has part: feature:378817-378963:-1:exon
so has part: feature:378593-378727:-1:exon
so has part: feature:377910-377993:-1:exon
so has part: feature:377001-377132:-1:exon
so has part: feature:375252-375314:-1:exon
so has part: feature:373970-374061:-1:exon
so has part: feature:371028-371169:-1:exon
so has part: feature:370594-370799:-1:exon
so has part: feature:369962-370202:-1:exon
so has part: feature:368997-369130:-1:exon
so has part: feature:368697-368854:-1:exon
so has part: feature:368008-368101:-1:exon
so has part: feature:367704-367785:-1:exon
so has part: feature:366736-366936:-1:exon
so has part: feature:365360-365422:-1:exon
so has part: feature:363673-363699:-1:exon
so has part: feature:362635-362810:-1:exon
so has part: feature:361875-361972:-1:exon
so has part: feature:361108-361283:-1:exon
so has part: feature:360813-360881:-1:exon
so has part: feature:360086-360263:-1:exon
so has part: feature:358754-358812:-1:exon

XP_015506267.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390869-391105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382580-382681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:382308-382472:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:381702-381776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:380099-380194:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379373-379594:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:378817-378963:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:378593-378727:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:377910-377993:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:377001-377132:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:375252-375314:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:373970-374061:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:371028-371169:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:370594-370799:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:369962-370202:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:368997-369130:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:368697-368854:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:368008-368101:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:367704-367785:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:366736-366936:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:365360-365422:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:363673-363699:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:362635-362810:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:361875-361972:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:361108-361283:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:360813-360881:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:360086-360263:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:358754-358812:-1:exon

PPFIA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PPFIA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: liprin-alpha-4 isoform X5
translation: MMCEVMPTISEGDPLGPPQGSEADADFEQLMVNMLDERDKLLDTLRETRETLAVTQSRLQETLRERDQLQRQLNSALPQEFATLTRELSTCREQLLEREEEISELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRAALERVATLEEQLVDAHRQVAALQQGSAREPAAGEREEREPKEPAPKLPWKRLSNGSVHSDDEAGRVVELQELLEKQNFEVVQAKERISALAASVAELEEDLGTARKDLIKSEEMSSKYQRDLREALAQKEDMEERITTLEKRYLAAQREATSIHDLNDKLENELANKESLHRQCEEKARHLQELLELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGSIEEHLRQLEAQLEEKNQELARARQREKMNEEHNKRLSDTVDRLLSESNERLQLHLKERMAALEEKNTLLQELENTQKQIEEHQHDKRRLSDEIDKLRLEVDQLKTRSGTFVESVHTRSHMGSATDLRFPLGAVVHAPAEPFGAAPGLPRAQKGRFGARREEPAKDWEQAQAGGVLATGPHAFDSDPDISDMDEDDRETLFSSMDVLSPGGHSDAQTLAMMLQEQLDAINEEIRMIQEEKESTELRAEELETRVTSGSMEGLNLTQLCKRASIPTSLTALSLASSSPPLSGRSTPKLSSRSAAQDLDRMGIMTLSPAARDESREDKTTIKCETSPPSSPRALRLEKLGHPALSQEDGKSSLEEQASNPSSSQDSLHKGSKRKGIKSSIGRLFGKKEKGRLIQLSREGATGQAVLLTDVEGGIQDPLGLGKLGAQAEKDRRLRKKHELLEEARRKGLPFAHWDGPTVVSWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNALHRLKLRLAIQEMVSLTSPSAPPTSRTSSGNVWVTHEEMENMATSTKTDTEEGSWAQTLAYGDMNHEWVGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRVHLKMVDSFHRTSLQYGIMCLKRLNYDRKELERRREETQHEIKDVLVWTNDQVIHWIQSIGLREYGNNLVESGVHGALLALDENFDHNSLALVLQIPTQNTQARQVLEREFNNLLALGTDRRLDDGDDKTFRRTPSWRKRFRPRDVHSINLLSGSAETLPAGFRVTSLVPLPPPAPPAKKMPPEVGASGSPRLETSTVRTYSC
SIO_010081: PPFIA4
subclass of: SO_0000673
so part of: PPFIA4
location: complement(join(358754..358812,360086..360263,360813..360881,361108..361283,361875..361972,362635..362810,363673..363699,365360..365422,366736..366936,367704..367785,368008..368104,368697..368854,368997..369130,369962..370202,370594..370799,371028..371169,373970..374061,375252..375314,377001..377132,377910..377993,378593..378727,378817..378963,379373..379594,380099..380194,381702..381776,382308..382472,382580..382681,390869..391105))
location: region:358754-391105:-1
so has part: feature:390869-391105:-1:exon
so has part: feature:382580-382681:-1:exon
so has part: feature:382308-382472:-1:exon
so has part: feature:381702-381776:-1:exon
so has part: feature:380099-380194:-1:exon
so has part: feature:379373-379594:-1:exon
so has part: feature:378817-378963:-1:exon
so has part: feature:378593-378727:-1:exon
so has part: feature:377910-377993:-1:exon
so has part: feature:377001-377132:-1:exon
so has part: feature:375252-375314:-1:exon
so has part: feature:373970-374061:-1:exon
so has part: feature:371028-371169:-1:exon
so has part: feature:370594-370799:-1:exon
so has part: feature:369962-370202:-1:exon
so has part: feature:368997-369130:-1:exon
so has part: feature:368697-368854:-1:exon
so has part: feature:368008-368104:-1:exon
so has part: feature:367704-367785:-1:exon
so has part: feature:366736-366936:-1:exon
so has part: feature:365360-365422:-1:exon
so has part: feature:363673-363699:-1:exon
so has part: feature:362635-362810:-1:exon
so has part: feature:361875-361972:-1:exon
so has part: feature:361108-361283:-1:exon
so has part: feature:360813-360881:-1:exon
so has part: feature:360086-360263:-1:exon
so has part: feature:358754-358812:-1:exon

XP_015506266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390869-391105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382580-382681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:382308-382472:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:381702-381776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:380099-380194:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379373-379594:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:378817-378963:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:378593-378727:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:377910-377993:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:377001-377132:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:375252-375314:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:373970-374061:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:371028-371169:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:370594-370799:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:369962-370202:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:368997-369130:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:368697-368854:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:368008-368104:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:367704-367785:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:366736-366936:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:365360-365422:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:363673-363699:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:362635-362810:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:361875-361972:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:361108-361283:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:360813-360881:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:360086-360263:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:358754-358812:-1:exon

PPFIA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PPFIA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: liprin-alpha-4 isoform X4
translation: MMCEVMPTISEGDPLGPPQGSEADADFEQLMVNMLDERDKLLDTLRETRETLAVTQSRLQETLRERDQLQRQLNSALPQEFATLTRELSTCREQLLEREEEISELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRAALERVATLEEQLVDAHRQVAALQQGSAREPAAGEREEREPKEPAPKLPWKRLSNGSVHSDDEAGRVVELQELLEKQNFEVVQAKERISALAASVAELEEDLGTARKDLIKSEEMSSKYQRDLREALAQKEDMEERITTLEKRYLAAQREATSIHDLNDKLENELANKESLHRQCEEKARHLQELLELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGSIEEHLRQLEAQLEEKNQELARARQREKMNEEHNKRLSDTVDRLLSESNERLQLHLKERMAALEEKNTLLQELENTQKQIEEHQHDKRRLSDEIDKLRLEVDQLKTRSGTFVESVHTRSHMGSATDLRFPLGAVVHAPAEPFGAAPGLPRAQKGRFGARREEPAKDWEQAQAGGVLATGPHAFDSDPDISDMDEDDRETLFSSMDVLSPGGHSDAQTLAMMLQEQLDAINEEIRMIQEEKESTELRAEELETRVTSGSMEGLNLTQLCKRASIPTSLTALSLASSSPPLSGRSTPKLSSRSAAQDLDRMGIMTLPSDLRKHRRKLLSPAARDESREDKTTIKCETSPPSSPRALRLEKLGHPALSQEDGKSSLEEQASNPSSSQDSLHKGSKRKGIKSSIGRLFGKKEKGRLIQLSREGATGQVLLTDVEGGIQDPLGLGKLGAQAEKDRRLRKKHELLEEARRKGLPFAHWDGPTVVSWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNALHRLKLRLAIQEMVSLTSPSAPPTSRTSSGNVWVTHEEMENMATSTKTTLAYGDMNHEWVGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRVHLKMVDSFHRTSLQYGIMCLKRLNYDRKELERRREETQHEIKDVLVWTNDQVIHWIQSIGLREYGNNLVESGVHGALLALDENFDHNSLALVLQIPTQNTQARQVLEREFNNLLALGTDRRLDDGDDKTFRRTPSWRKRFRPRDVHSINLLSGSAETLPAGFRVTSLVPLPPPAPPAKKMPPEVGASGSPRLETSTVRTYSC
SIO_010081: PPFIA4
subclass of: SO_0000673
so part of: PPFIA4
location: complement(join(358754..358812,360086..360263,360813..360881,361108..361283,361875..361972,362635..362810,365360..365422,366736..366936,367704..367785,368008..368101,368697..368854,368997..369130,369714..369749,369962..370202,370594..370799,371028..371169,373970..374061,375252..375314,377001..377132,377910..377993,378593..378727,378817..378963,379373..379594,380099..380194,381702..381776,382308..382472,382580..382681,390869..391105))
location: region:358754-391105:-1
so has part: feature:390869-391105:-1:exon
so has part: feature:382580-382681:-1:exon
so has part: feature:382308-382472:-1:exon
so has part: feature:381702-381776:-1:exon
so has part: feature:380099-380194:-1:exon
so has part: feature:379373-379594:-1:exon
so has part: feature:378817-378963:-1:exon
so has part: feature:378593-378727:-1:exon
so has part: feature:377910-377993:-1:exon
so has part: feature:377001-377132:-1:exon
so has part: feature:375252-375314:-1:exon
so has part: feature:373970-374061:-1:exon
so has part: feature:371028-371169:-1:exon
so has part: feature:370594-370799:-1:exon
so has part: feature:369962-370202:-1:exon
so has part: feature:369714-369749:-1:exon
so has part: feature:368997-369130:-1:exon
so has part: feature:368697-368854:-1:exon
so has part: feature:368008-368101:-1:exon
so has part: feature:367704-367785:-1:exon
so has part: feature:366736-366936:-1:exon
so has part: feature:365360-365422:-1:exon
so has part: feature:362635-362810:-1:exon
so has part: feature:361875-361972:-1:exon
so has part: feature:361108-361283:-1:exon
so has part: feature:360813-360881:-1:exon
so has part: feature:360086-360263:-1:exon
so has part: feature:358754-358812:-1:exon

XP_015506265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390869-391105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382580-382681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:382308-382472:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:381702-381776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:380099-380194:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379373-379594:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:378817-378963:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:378593-378727:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:377910-377993:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:377001-377132:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:375252-375314:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:373970-374061:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:371028-371169:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:370594-370799:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:369962-370202:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:369714-369749:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:368997-369130:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:368697-368854:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:368008-368101:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:367704-367785:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:366736-366936:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:365360-365422:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:362635-362810:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:361875-361972:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:361108-361283:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:360813-360881:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:360086-360263:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:358754-358812:-1:exon

PPFIA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PPFIA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: liprin-alpha-4 isoform X2
translation: MMCEVMPTISEGDPLGPPQGSEADADFEQLMVNMLDERDKLLDTLRETRETLAVTQSRLQETLRERDQLQRQLNSALPQEFATLTRELSTCREQLLEREEEISELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRAALERVATLEEQLVDAHRQVAALQQGSAREPAAGEREEREPKEPAPKLPWKRLSNGSVHSDDEAGRVVELQELLEKQNFEVVQAKERISALAASVAELEEDLGTARKDLIKSEEMSSKYQRDLREALAQKEDMEERITTLEKRYLAAQREATSIHDLNDKLENELANKESLHRQCEEKARHLQELLELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGSIEEHLRQLEAQLEEKNQELARARQREKMNEEHNKRLSDTVDRLLSESNERLQLHLKERMAALEEKNTLLQELENTQKQIEEHQHDKRRLSDEIDKLRLEVDQLKTRSGTFVESVHTRSHMGSATDLRFPLGAVVHAPAEPFGAAPGLPRAQKGRFGARREEPAKDWEQAQAGGVLATGPHAFDSDPDISDMDEDDRETLFSSMDVLSPGGHSDAQTLAMMLQEQLDAINEEIRMIQEEKESTELRAEELETRVTSGSMEGLNLTQLCKRASIPTSLTALSLASSSPPLSGRSTPKLSSRSAAQDLDRMGIMTLPSDLRKHRRKLLSPAARDESREDKTTIKCETSPPSSPRALRLEKLGHPALSQEDGKSSLEEQASNPSSSQDSLHKGSKRKGIKSSIGRLFGKKEKGRLIQLSREGATGQVLLTDVEGGIQDPLGLGKLGAQAEKDRRLRKKHELLEEARRKGLPFAHWDGPTVVSWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNALHRLKLRLAIQEMVSLTSPSAPPTSRTSSGNVWVTHEEMENMATSTKTDTEEGSWAQTLAYGDMNHEWVGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRVHLKMVDSFHRTSLQYGIMCLKRLNYDRKELERRREETQHEIKDVLVWTNDQVIHWIQSIGLREYGNNLVESGVHGALLALDENFDHNSLALVLQIPTQNTQARQVLEREFNNLLALGTDRRLDDGDDKTFRRTPSWRKRFRPRDVHSINLLSGSAETLPAGFRVTSLVPLPPPAPPAKKMPPEVGASGSPRLETSTVRTYSC
SIO_010081: PPFIA4
subclass of: SO_0000673
so part of: PPFIA4
location: complement(join(358754..358812,360086..360263,360813..360881,361108..361283,361875..361972,362635..362810,363673..363699,365360..365422,366736..366936,367704..367785,368008..368101,368697..368854,368997..369130,369714..369749,369962..370202,370594..370799,371028..371169,373970..374061,375252..375314,377001..377132,377910..377993,378593..378727,378817..378963,379373..379594,380099..380194,381702..381776,382308..382472,382580..382681,390869..391105))
location: region:358754-391105:-1
so has part: feature:390869-391105:-1:exon
so has part: feature:382580-382681:-1:exon
so has part: feature:382308-382472:-1:exon
so has part: feature:381702-381776:-1:exon
so has part: feature:380099-380194:-1:exon
so has part: feature:379373-379594:-1:exon
so has part: feature:378817-378963:-1:exon
so has part: feature:378593-378727:-1:exon
so has part: feature:377910-377993:-1:exon
so has part: feature:377001-377132:-1:exon
so has part: feature:375252-375314:-1:exon
so has part: feature:373970-374061:-1:exon
so has part: feature:371028-371169:-1:exon
so has part: feature:370594-370799:-1:exon
so has part: feature:369962-370202:-1:exon
so has part: feature:369714-369749:-1:exon
so has part: feature:368997-369130:-1:exon
so has part: feature:368697-368854:-1:exon
so has part: feature:368008-368101:-1:exon
so has part: feature:367704-367785:-1:exon
so has part: feature:366736-366936:-1:exon
so has part: feature:365360-365422:-1:exon
so has part: feature:363673-363699:-1:exon
so has part: feature:362635-362810:-1:exon
so has part: feature:361875-361972:-1:exon
so has part: feature:361108-361283:-1:exon
so has part: feature:360813-360881:-1:exon
so has part: feature:360086-360263:-1:exon
so has part: feature:358754-358812:-1:exon

XP_015506263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390869-391105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382580-382681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:382308-382472:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:381702-381776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:380099-380194:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379373-379594:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:378817-378963:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:378593-378727:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:377910-377993:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:377001-377132:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:375252-375314:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:373970-374061:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:371028-371169:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:370594-370799:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:369962-370202:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:369714-369749:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:368997-369130:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:368697-368854:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:368008-368101:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:367704-367785:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:366736-366936:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:365360-365422:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:363673-363699:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:362635-362810:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:361875-361972:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:361108-361283:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:360813-360881:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:360086-360263:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:358754-358812:-1:exon

PPFIA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PPFIA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: liprin-alpha-4 isoform X3
translation: MMCEVMPTISEGDPLGPPQGSEADADFEQLMVNMLDERDKLLDTLRETRETLAVTQSRLQETLRERDQLQRQLNSALPQEFATLTRELSTCREQLLEREEEISELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRAALERVATLEEQLVDAHRQVAALQQGSAREPAAGEREEREPKEPAPKLPWKRLSNGSVHSDDEAGRVVELQELLEKQNFEVVQAKERISALAASVAELEEDLGTARKDLIKSEEMSSKYQRDLREALAQKEDMEERITTLEKRYLAAQREATSIHDLNDKLENELANKESLHRQCEEKARHLQELLELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGSIEEHLRQLEAQLEEKNQELARARQREKMNEEHNKRLSDTVDRLLSESNERLQLHLKERMAALEEKNTLLQELENTQKQIEEHQHDKRRLSDEIDKLRLEVDQLKTRSGTFVESVHTRSHMGSATDLRFPLGAVVHAPAEPFGAAPGLPRAQKGRFGARREEPAKDWEQAQAGGVLATGPHAFDSDPDISDMDEDDRETLFSSMDVLSPGGHSDAQTLAMMLQEQLDAINEEIRMIQEEKESTELRAEELETRVTSGSMEGLNLTQLCKRASIPTSLTALSLASSSPPLSGRSTPKLSSRSAAQDLDRMGIMTLPSDLRKHRRKLLSPAARDESREDKTTIKCETSPPSSPRALRLEKLGHPALSQEDGKSSLEEQASNPSSSQDSLHKGSKRKGIKSSIGRLFGKKEKGRLIQLSREGATGQAVLLTDVEGGIQDPLGLGKLGAQAEKDRRLRKKHELLEEARRKGLPFAHWDGPTVVSWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNALHRLKLRLAIQEMVSLTSPSAPPTSRTSSGNVWVTHEEMENMATSTKTTLAYGDMNHEWVGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRVHLKMVDSFHRTSLQYGIMCLKRLNYDRKELERRREETQHEIKDVLVWTNDQVIHWIQSIGLREYGNNLVESGVHGALLALDENFDHNSLALVLQIPTQNTQARQVLEREFNNLLALGTDRRLDDGDDKTFRRTPSWRKRFRPRDVHSINLLSGSAETLPAGFRVTSLVPLPPPAPPAKKMPPEVGASGSPRLETSTVRTYSC
SIO_010081: PPFIA4
subclass of: SO_0000673
so part of: PPFIA4
location: complement(join(358754..358812,360086..360263,360813..360881,361108..361283,361875..361972,362635..362810,365360..365422,366736..366936,367704..367785,368008..368104,368697..368854,368997..369130,369714..369749,369962..370202,370594..370799,371028..371169,373970..374061,375252..375314,377001..377132,377910..377993,378593..378727,378817..378963,379373..379594,380099..380194,381702..381776,382308..382472,382580..382681,390869..391105))
location: region:358754-391105:-1
so has part: feature:390869-391105:-1:exon
so has part: feature:382580-382681:-1:exon
so has part: feature:382308-382472:-1:exon
so has part: feature:381702-381776:-1:exon
so has part: feature:380099-380194:-1:exon
so has part: feature:379373-379594:-1:exon
so has part: feature:378817-378963:-1:exon
so has part: feature:378593-378727:-1:exon
so has part: feature:377910-377993:-1:exon
so has part: feature:377001-377132:-1:exon
so has part: feature:375252-375314:-1:exon
so has part: feature:373970-374061:-1:exon
so has part: feature:371028-371169:-1:exon
so has part: feature:370594-370799:-1:exon
so has part: feature:369962-370202:-1:exon
so has part: feature:369714-369749:-1:exon
so has part: feature:368997-369130:-1:exon
so has part: feature:368697-368854:-1:exon
so has part: feature:368008-368104:-1:exon
so has part: feature:367704-367785:-1:exon
so has part: feature:366736-366936:-1:exon
so has part: feature:365360-365422:-1:exon
so has part: feature:362635-362810:-1:exon
so has part: feature:361875-361972:-1:exon
so has part: feature:361108-361283:-1:exon
so has part: feature:360813-360881:-1:exon
so has part: feature:360086-360263:-1:exon
so has part: feature:358754-358812:-1:exon

XP_015506264.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390869-391105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382580-382681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:382308-382472:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:381702-381776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:380099-380194:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379373-379594:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:378817-378963:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:378593-378727:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:377910-377993:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:377001-377132:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:375252-375314:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:373970-374061:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:371028-371169:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:370594-370799:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:369962-370202:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:369714-369749:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:368997-369130:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:368697-368854:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:368008-368104:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:367704-367785:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:366736-366936:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:365360-365422:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:362635-362810:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:361875-361972:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:361108-361283:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:360813-360881:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:360086-360263:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:358754-358812:-1:exon

PPFIA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PPFIA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: liprin-alpha-4 isoform X1
translation: MMCEVMPTISEGDPLGPPQGSEADADFEQLMVNMLDERDKLLDTLRETRETLAVTQSRLQETLRERDQLQRQLNSALPQEFATLTRELSTCREQLLEREEEISELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRAALERVATLEEQLVDAHRQVAALQQGSAREPAAGEREEREPKEPAPKLPWKRLSNGSVHSDDEAGRVVELQELLEKQNFEVVQAKERISALAASVAELEEDLGTARKDLIKSEEMSSKYQRDLREALAQKEDMEERITTLEKRYLAAQREATSIHDLNDKLENELANKESLHRQCEEKARHLQELLELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGSIEEHLRQLEAQLEEKNQELARARQREKMNEEHNKRLSDTVDRLLSESNERLQLHLKERMAALEEKNTLLQELENTQKQIEEHQHDKRRLSDEIDKLRLEVDQLKTRSGTFVESVHTRSHMGSATDLRFPLGAVVHAPAEPFGAAPGLPRAQKGRFGARREEPAKDWEQAQAGGVLATGPHAFDSDPDISDMDEDDRETLFSSMDVLSPGGHSDAQTLAMMLQEQLDAINEEIRMIQEEKESTELRAEELETRVTSGSMEGLNLTQLCKRASIPTSLTALSLASSSPPLSGRSTPKLSSRSAAQDLDRMGIMTLPSDLRKHRRKLLSPAARDESREDKTTIKCETSPPSSPRALRLEKLGHPALSQEDGKSSLEEQASNPSSSQDSLHKGSKRKGIKSSIGRLFGKKEKGRLIQLSREGATGQAVLLTDVEGGIQDPLGLGKLGAQAEKDRRLRKKHELLEEARRKGLPFAHWDGPTVVSWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNALHRLKLRLAIQEMVSLTSPSAPPTSRTSSGNVWVTHEEMENMATSTKTDTEEGSWAQTLAYGDMNHEWVGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRVHLKMVDSFHRTSLQYGIMCLKRLNYDRKELERRREETQHEIKDVLVWTNDQVIHWIQSIGLREYGNNLVESGVHGALLALDENFDHNSLALVLQIPTQNTQARQVLEREFNNLLALGTDRRLDDGDDKTFRRTPSWRKRFRPRDVHSINLLSGSAETLPAGFRVTSLVPLPPPAPPAKKMPPEVGASGSPRLETSTVRTYSC
SIO_010081: PPFIA4
subclass of: SO_0000673
so part of: PPFIA4
location: complement(join(358754..358812,360086..360263,360813..360881,361108..361283,361875..361972,362635..362810,363673..363699,365360..365422,366736..366936,367704..367785,368008..368104,368697..368854,368997..369130,369714..369749,369962..370202,370594..370799,371028..371169,373970..374061,375252..375314,377001..377132,377910..377993,378593..378727,378817..378963,379373..379594,380099..380194,381702..381776,382308..382472,382580..382681,390869..391105))
location: region:358754-391105:-1
so has part: feature:390869-391105:-1:exon
so has part: feature:382580-382681:-1:exon
so has part: feature:382308-382472:-1:exon
so has part: feature:381702-381776:-1:exon
so has part: feature:380099-380194:-1:exon
so has part: feature:379373-379594:-1:exon
so has part: feature:378817-378963:-1:exon
so has part: feature:378593-378727:-1:exon
so has part: feature:377910-377993:-1:exon
so has part: feature:377001-377132:-1:exon
so has part: feature:375252-375314:-1:exon
so has part: feature:373970-374061:-1:exon
so has part: feature:371028-371169:-1:exon
so has part: feature:370594-370799:-1:exon
so has part: feature:369962-370202:-1:exon
so has part: feature:369714-369749:-1:exon
so has part: feature:368997-369130:-1:exon
so has part: feature:368697-368854:-1:exon
so has part: feature:368008-368104:-1:exon
so has part: feature:367704-367785:-1:exon
so has part: feature:366736-366936:-1:exon
so has part: feature:365360-365422:-1:exon
so has part: feature:363673-363699:-1:exon
so has part: feature:362635-362810:-1:exon
so has part: feature:361875-361972:-1:exon
so has part: feature:361108-361283:-1:exon
so has part: feature:360813-360881:-1:exon
so has part: feature:360086-360263:-1:exon
so has part: feature:358754-358812:-1:exon

XP_033375782.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390869-391105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382580-382681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:382308-382472:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:381702-381776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:380099-380194:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379373-379594:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:378817-378963:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:378593-378727:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:377910-377993:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:377001-377132:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:375252-375314:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:373970-374061:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:371028-371169:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:370594-370799:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:369962-370202:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:369714-369749:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:368997-369130:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:368697-368854:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:368008-368104:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:367704-367785:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:366736-366936:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:365360-365422:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:363673-363699:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:362635-362810:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:361875-361972:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:361108-361283:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:360813-360881:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:360086-360263:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:358754-358812:-1:exon

PPFIA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PPFIA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: liprin-alpha-4 isoform X1
translation: MMCEVMPTISEGDPLGPPQGSEADADFEQLMVNMLDERDKLLDTLRETRETLAVTQSRLQETLRERDQLQRQLNSALPQEFATLTRELSTCREQLLEREEEISELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRAALERVATLEEQLVDAHRQVAALQQGSAREPAAGEREEREPKEPAPKLPWKRLSNGSVHSDDEAGRVVELQELLEKQNFEVVQAKERISALAASVAELEEDLGTARKDLIKSEEMSSKYQRDLREALAQKEDMEERITTLEKRYLAAQREATSIHDLNDKLENELANKESLHRQCEEKARHLQELLELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGSIEEHLRQLEAQLEEKNQELARARQREKMNEEHNKRLSDTVDRLLSESNERLQLHLKERMAALEEKNTLLQELENTQKQIEEHQHDKRRLSDEIDKLRLEVDQLKTRSGTFVESVHTRSHMGSATDLRFPLGAVVHAPAEPFGAAPGLPRAQKGRFGARREEPAKDWEQAQAGGVLATGPHAFDSDPDISDMDEDDRETLFSSMDVLSPGGHSDAQTLAMMLQEQLDAINEEIRMIQEEKESTELRAEELETRVTSGSMEGLNLTQLCKRASIPTSLTALSLASSSPPLSGRSTPKLSSRSAAQDLDRMGIMTLPSDLRKHRRKLLSPAARDESREDKTTIKCETSPPSSPRALRLEKLGHPALSQEDGKSSLEEQASNPSSSQDSLHKGSKRKGIKSSIGRLFGKKEKGRLIQLSREGATGQAVLLTDVEGGIQDPLGLGKLGAQAEKDRRLRKKHELLEEARRKGLPFAHWDGPTVVSWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNALHRLKLRLAIQEMVSLTSPSAPPTSRTSSGNVWVTHEEMENMATSTKTDTEEGSWAQTLAYGDMNHEWVGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRVHLKMVDSFHRTSLQYGIMCLKRLNYDRKELERRREETQHEIKDVLVWTNDQVIHWIQSIGLREYGNNLVESGVHGALLALDENFDHNSLALVLQIPTQNTQARQVLEREFNNLLALGTDRRLDDGDDKTFRRTPSWRKRFRPRDVHSINLLSGSAETLPAGFRVTSLVPLPPPAPPAKKMPPEVGASGSPRLETSTVRTYSC
SIO_010081: PPFIA4
subclass of: SO_0000673
so part of: PPFIA4
location: complement(join(358754..358812,360086..360263,360813..360881,361108..361283,361875..361972,362635..362810,363673..363699,365360..365422,366736..366936,367704..367785,368008..368104,368697..368854,368997..369130,369714..369749,369962..370202,370594..370799,371028..371169,373970..374061,375252..375314,377001..377132,377910..377993,378593..378727,378817..378963,379373..379594,380099..380194,381702..381776,382308..382472,382580..382681,390869..391105))
location: region:358754-391105:-1
so has part: feature:390869-391105:-1:exon
so has part: feature:382580-382681:-1:exon
so has part: feature:382308-382472:-1:exon
so has part: feature:381702-381776:-1:exon
so has part: feature:380099-380194:-1:exon
so has part: feature:379373-379594:-1:exon
so has part: feature:378817-378963:-1:exon
so has part: feature:378593-378727:-1:exon
so has part: feature:377910-377993:-1:exon
so has part: feature:377001-377132:-1:exon
so has part: feature:375252-375314:-1:exon
so has part: feature:373970-374061:-1:exon
so has part: feature:371028-371169:-1:exon
so has part: feature:370594-370799:-1:exon
so has part: feature:369962-370202:-1:exon
so has part: feature:369714-369749:-1:exon
so has part: feature:368997-369130:-1:exon
so has part: feature:368697-368854:-1:exon
so has part: feature:368008-368104:-1:exon
so has part: feature:367704-367785:-1:exon
so has part: feature:366736-366936:-1:exon
so has part: feature:365360-365422:-1:exon
so has part: feature:363673-363699:-1:exon
so has part: feature:362635-362810:-1:exon
so has part: feature:361875-361972:-1:exon
so has part: feature:361108-361283:-1:exon
so has part: feature:360813-360881:-1:exon
so has part: feature:360086-360263:-1:exon
so has part: feature:358754-358812:-1:exon

XP_033375783.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390869-391105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382580-382681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:382308-382472:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:381702-381776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:380099-380194:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379373-379594:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:378817-378963:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:378593-378727:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:377910-377993:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:377001-377132:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:375252-375314:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:373970-374061:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:371028-371169:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:370594-370799:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:369962-370202:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:369714-369749:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:368997-369130:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:368697-368854:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:368008-368104:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:367704-367785:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:366736-366936:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:365360-365422:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:363673-363699:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:362635-362810:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:361875-361972:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:361108-361283:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:360813-360881:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:360086-360263:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:358754-358812:-1:exon

PPFIA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PPFIA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: liprin-alpha-4 isoform X1
translation: MMCEVMPTISEGDPLGPPQGSEADADFEQLMVNMLDERDKLLDTLRETRETLAVTQSRLQETLRERDQLQRQLNSALPQEFATLTRELSTCREQLLEREEEISELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRAALERVATLEEQLVDAHRQVAALQQGSAREPAAGEREEREPKEPAPKLPWKRLSNGSVHSDDEAGRVVELQELLEKQNFEVVQAKERISALAASVAELEEDLGTARKDLIKSEEMSSKYQRDLREALAQKEDMEERITTLEKRYLAAQREATSIHDLNDKLENELANKESLHRQCEEKARHLQELLELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGSIEEHLRQLEAQLEEKNQELARARQREKMNEEHNKRLSDTVDRLLSESNERLQLHLKERMAALEEKNTLLQELENTQKQIEEHQHDKRRLSDEIDKLRLEVDQLKTRSGTFVESVHTRSHMGSATDLRFPLGAVVHAPAEPFGAAPGLPRAQKGRFGARREEPAKDWEQAQAGGVLATGPHAFDSDPDISDMDEDDRETLFSSMDVLSPGGHSDAQTLAMMLQEQLDAINEEIRMIQEEKESTELRAEELETRVTSGSMEGLNLTQLCKRASIPTSLTALSLASSSPPLSGRSTPKLSSRSAAQDLDRMGIMTLPSDLRKHRRKLLSPAARDESREDKTTIKCETSPPSSPRALRLEKLGHPALSQEDGKSSLEEQASNPSSSQDSLHKGSKRKGIKSSIGRLFGKKEKGRLIQLSREGATGQAVLLTDVEGGIQDPLGLGKLGAQAEKDRRLRKKHELLEEARRKGLPFAHWDGPTVVSWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNALHRLKLRLAIQEMVSLTSPSAPPTSRTSSGNVWVTHEEMENMATSTKTDTEEGSWAQTLAYGDMNHEWVGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRVHLKMVDSFHRTSLQYGIMCLKRLNYDRKELERRREETQHEIKDVLVWTNDQVIHWIQSIGLREYGNNLVESGVHGALLALDENFDHNSLALVLQIPTQNTQARQVLEREFNNLLALGTDRRLDDGDDKTFRRTPSWRKRFRPRDVHSINLLSGSAETLPAGFRVTSLVPLPPPAPPAKKMPPEVGASGSPRLETSTVRTYSC
SIO_010081: PPFIA4
subclass of: SO_0000673
so part of: PPFIA4
location: complement(join(358754..358812,360086..360263,360813..360881,361108..361283,361875..361972,362635..362810,363673..363699,365360..365422,366736..366936,367704..367785,368008..368104,368697..368854,368997..369130,369714..369749,369962..370202,370594..370799,371028..371169,373970..374061,375252..375314,377001..377132,377910..377993,378593..378727,378817..378963,379373..379594,380099..380194,381702..381776,382308..382472,382580..382681,390869..391105))
location: region:358754-391105:-1
so has part: feature:390869-391105:-1:exon
so has part: feature:382580-382681:-1:exon
so has part: feature:382308-382472:-1:exon
so has part: feature:381702-381776:-1:exon
so has part: feature:380099-380194:-1:exon
so has part: feature:379373-379594:-1:exon
so has part: feature:378817-378963:-1:exon
so has part: feature:378593-378727:-1:exon
so has part: feature:377910-377993:-1:exon
so has part: feature:377001-377132:-1:exon
so has part: feature:375252-375314:-1:exon
so has part: feature:373970-374061:-1:exon
so has part: feature:371028-371169:-1:exon
so has part: feature:370594-370799:-1:exon
so has part: feature:369962-370202:-1:exon
so has part: feature:369714-369749:-1:exon
so has part: feature:368997-369130:-1:exon
so has part: feature:368697-368854:-1:exon
so has part: feature:368008-368104:-1:exon
so has part: feature:367704-367785:-1:exon
so has part: feature:366736-366936:-1:exon
so has part: feature:365360-365422:-1:exon
so has part: feature:363673-363699:-1:exon
so has part: feature:362635-362810:-1:exon
so has part: feature:361875-361972:-1:exon
so has part: feature:361108-361283:-1:exon
so has part: feature:360813-360881:-1:exon
so has part: feature:360086-360263:-1:exon
so has part: feature:358754-358812:-1:exon

XP_015506262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390869-391105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382580-382681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:382308-382472:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:381702-381776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:380099-380194:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379373-379594:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:378817-378963:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:378593-378727:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:377910-377993:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:377001-377132:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:375252-375314:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:373970-374061:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:371028-371169:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:370594-370799:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:369962-370202:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:369714-369749:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:368997-369130:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:368697-368854:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:368008-368104:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:367704-367785:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:366736-366936:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:365360-365422:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:363673-363699:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:362635-362810:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:361875-361972:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:361108-361283:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:360813-360881:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:360086-360263:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:358754-358812:-1:exon

TMEM183A
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: TMEM183A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 422095..435330
location: region:422095-435330:1
so has part: feature:422095-435330:1:exon
subclass of: SO_0000010

107214889
type: Gene
SIO_000068: ncbigene

position:422095:1
position: 422095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435330:1
position: 435330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422095-435330:1:exon

TMEM183A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: TMEM183A
product: transmembrane protein 183A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 22 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_015650672.2
SIO_010081: TMEM183A
subclass of: SO_0000673
so part of: TMEM183A
location: join(422095..422222,422926..423015,425893..426048,428230..428389,429800..429980,433143..433223,433884..434039,435018..435330)
location: region:422095-435330:1
so has part: feature:422095-422222:1:exon
so has part: feature:422926-423015:1:exon
so has part: feature:425893-426048:1:exon
so has part: feature:428230-428389:1:exon
so has part: feature:429800-429980:1:exon
so has part: feature:433143-433223:1:exon
so has part: feature:433884-434039:1:exon
so has part: feature:435018-435330:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:422095-422222:1:exon

position:422222:1
position: 422222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:422926-423015:1:exon

position:422926:1
position: 422926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423015:1
position: 423015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:425893-426048:1:exon

position:425893:1
position: 425893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426048:1
position: 426048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:428230-428389:1:exon

position:428230:1
position: 428230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428389:1
position: 428389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:429800-429980:1:exon

position:429800:1
position: 429800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429980:1
position: 429980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:433143-433223:1:exon

position:433143:1
position: 433143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433223:1
position: 433223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:433884-434039:1:exon

position:433884:1
position: 433884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434039:1
position: 434039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:435018-435330:1:exon

position:435018:1
position: 435018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM183A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: TMEM183A
product: transmembrane protein 183A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_015650673.3
SIO_010081: TMEM183A
subclass of: SO_0000673
so part of: TMEM183A
location: join(422095..422222,422926..423015,425893..426048,428233..428389,429800..429980,433143..433223,433884..434039,435018..435330)
location: region:422095-435330:1
so has part: feature:422095-422222:1:exon
so has part: feature:422926-423015:1:exon
so has part: feature:425893-426048:1:exon
so has part: feature:428233-428389:1:exon
so has part: feature:429800-429980:1:exon
so has part: feature:433143-433223:1:exon
so has part: feature:433884-434039:1:exon
so has part: feature:435018-435330:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:422095-422222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:422926-423015:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:425893-426048:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:428233-428389:1:exon

position:428233:1
position: 428233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:429800-429980:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:433143-433223:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:433884-434039:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:435018-435330:1:exon

TMEM183A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: TMEM183A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 183A isoform X1
translation: MAPRGRPAAAAMPRRGARKRLKFRADDVCSERVTVADYANSDPAVVKSGRVKKAVANAVQQEVKSLCGLEASCVPAEEVLSVSGESCDSSDEMDIKESINGRAASRKKKSKRHKEDAEGGGGEEYPIDIWLLLASYIRPEDIVRFSLICKKAWTVTCTAAFWTRLYRRHYSLDAYLPLRLRPESMEKLHCLRACVIRSLFHMYEPFAARLSRNPAIPDTTPSTLKNSRCLLFWCKKIVGNRQEAMWEFNFKFKKQSPRFKSKCCKGLQPPIQYEEVHTNPDQDCCLLQITTFNFIFVPIVMGMTFTLFSISVSTDMRHHRVRLVFQDAPVRNGKKPRVEQGVQVVLDPVHSVRLLDWWHPQYPFSPKA
SIO_010081: TMEM183A
subclass of: SO_0000673
so part of: TMEM183A
location: join(422126..422222,422926..423015,425893..426048,428230..428389,429800..429980,433143..433223,433884..434039,435018..435203)
location: region:422126-435203:1
so has part: feature:422126-422222:1:exon
so has part: feature:422926-423015:1:exon
so has part: feature:425893-426048:1:exon
so has part: feature:428230-428389:1:exon
so has part: feature:429800-429980:1:exon
so has part: feature:433143-433223:1:exon
so has part: feature:433884-434039:1:exon
so has part: feature:435018-435203:1:exon

XP_015506158.1
type: Protein
SIO_000068: ncbiprotein

position:422126:1
position: 422126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435203:1
position: 435203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422126-422222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:422926-423015:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:425893-426048:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:428230-428389:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:429800-429980:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:433143-433223:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:433884-434039:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:435018-435203:1:exon

TMEM183A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: TMEM183A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 183A isoform X2
translation: MAPRGRPAAAAMPRRGARKRLKFRADDVCSERVTVADYANSDPAVVKSGRVKKAVANAVQQEVKSLCGLEASCVPAEEVLSVSGESCDSSDEMDIKESINGRAASRKKKSKRHKDAEGGGGEEYPIDIWLLLASYIRPEDIVRFSLICKKAWTVTCTAAFWTRLYRRHYSLDAYLPLRLRPESMEKLHCLRACVIRSLFHMYEPFAARLSRNPAIPDTTPSTLKNSRCLLFWCKKIVGNRQEAMWEFNFKFKKQSPRFKSKCCKGLQPPIQYEEVHTNPDQDCCLLQITTFNFIFVPIVMGMTFTLFSISVSTDMRHHRVRLVFQDAPVRNGKKPRVEQGVQVVLDPVHSVRLLDWWHPQYPFSPKA
SIO_010081: TMEM183A
subclass of: SO_0000673
so part of: TMEM183A
location: join(422126..422222,422926..423015,425893..426048,428233..428389,429800..429980,433143..433223,433884..434039,435018..435203)
location: region:422126-435203:1
so has part: feature:422126-422222:1:exon
so has part: feature:422926-423015:1:exon
so has part: feature:425893-426048:1:exon
so has part: feature:428233-428389:1:exon
so has part: feature:429800-429980:1:exon
so has part: feature:433143-433223:1:exon
so has part: feature:433884-434039:1:exon
so has part: feature:435018-435203:1:exon

XP_015506159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:422126-422222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:422926-423015:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:425893-426048:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:428233-428389:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:429800-429980:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:433143-433223:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:433884-434039:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:435018-435203:1:exon

LOC107214888
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107214888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 435620..445724
location: region:435620-445724:1
so has part: feature:435620-445724:1:exon
subclass of: SO_0000010

107214888
type: Gene
SIO_000068: ncbigene

position:435620:1
position: 435620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445724:1
position: 445724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435620-445724:1:exon

LOC107214888
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107214888
product: alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_033519996.1
SIO_010081: LOC107214888
subclass of: SO_0000673
so part of: LOC107214888
location: join(435620..436616,438071..438152,442337..442418,442986..443112,443386..443533,444470..445718)
location: region:435620-445718:1
so has part: feature:435620-436616:1:exon
so has part: feature:438071-438152:1:exon
so has part: feature:442337-442418:1:exon
so has part: feature:442986-443112:1:exon
so has part: feature:443386-443533:1:exon
so has part: feature:444470-445718:1:exon

position:445718:1
position: 445718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435620-436616:1:exon

position:436616:1
position: 436616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:438071-438152:1:exon

position:438071:1
position: 438071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438152:1
position: 438152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:442337-442418:1:exon

position:442337:1
position: 442337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442418:1
position: 442418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:442986-443112:1:exon

position:442986:1
position: 442986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443112:1
position: 443112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:443386-443533:1:exon

position:443386:1
position: 443386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443533:1
position: 443533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:444470-445718:1:exon

position:444470:1
position: 444470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107214888
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107214888
product: alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_033519998.1
SIO_010081: LOC107214888
subclass of: SO_0000673
so part of: LOC107214888
location: join(435620..436616,438071..438152,442986..443112,443386..443533,444470..445718)
location: region:435620-445718:1
so has part: feature:435620-436616:1:exon
so has part: feature:438071-438152:1:exon
so has part: feature:442986-443112:1:exon
so has part: feature:443386-443533:1:exon
so has part: feature:444470-445718:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:435620-436616:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:438071-438152:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:442986-443112:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:443386-443533:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:444470-445718:1:exon

LOC107214888
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107214888
product: alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_015650666.2
SIO_010081: LOC107214888
subclass of: SO_0000673
so part of: LOC107214888
location: join(435620..436616,442322..442418,442986..443112,443386..443533,444470..445718)
location: region:435620-445718:1
so has part: feature:435620-436616:1:exon
so has part: feature:442322-442418:1:exon
so has part: feature:442986-443112:1:exon
so has part: feature:443386-443533:1:exon
so has part: feature:444470-445718:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:435620-436616:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:442322-442418:1:exon

position:442322:1
position: 442322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:442986-443112:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:443386-443533:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:444470-445718:1:exon

LOC107214888
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107214888
product: alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_015650668.2
SIO_010081: LOC107214888
subclass of: SO_0000673
so part of: LOC107214888
location: join(435620..436616,442986..443112,443386..443533,444470..445718)
location: region:435620-445718:1
so has part: feature:435620-436616:1:exon
so has part: feature:442986-443112:1:exon
so has part: feature:443386-443533:1:exon
so has part: feature:444470-445718:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:435620-436616:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:442986-443112:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:443386-443533:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:444470-445718:1:exon

LOC107214888
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107214888
product: alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_033519997.1
SIO_010081: LOC107214888
subclass of: SO_0000673
so part of: LOC107214888
location: join(435620..435802,436241..436616,442337..442418,442986..443112,443386..443533,444470..445718)
location: region:435620-445718:1
so has part: feature:435620-435802:1:exon
so has part: feature:436241-436616:1:exon
so has part: feature:442337-442418:1:exon
so has part: feature:442986-443112:1:exon
so has part: feature:443386-443533:1:exon
so has part: feature:444470-445718:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:435620-435802:1:exon

position:435802:1
position: 435802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:436241-436616:1:exon

position:436241:1
position: 436241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:442337-442418:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:442986-443112:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:443386-443533:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:444470-445718:1:exon

LOC107214888
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107214888
product: alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_015650663.3
SIO_010081: LOC107214888
subclass of: SO_0000673
so part of: LOC107214888
location: join(440261..440625,442986..443112,443386..443533,444470..445724)
location: region:440261-445724:1
so has part: feature:440261-440625:1:exon
so has part: feature:442986-443112:1:exon
so has part: feature:443386-443533:1:exon
so has part: feature:444470-445724:1:exon

position:440261:1
position: 440261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440261-440625:1:exon

position:440625:1
position: 440625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:442986-443112:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:443386-443533:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:444470-445724:1:exon

LOC107214888
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107214888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like isoform X1
translation: MAGLCWSSGCWGLAGAPSGGWWCPGDWRMGSGGHRPVPCWDVPGAAPFPRWAGGPRRPGRLCGALGAEAGGGRSSSEGGRRGLGVGLCRARIQSVASPGKCQGRVPQRGDAAAHPPQPAGAMRCSLKRSLMVLLTASFLLLLLLLHGGSRQEQDPLKVELRGLAPDTILQLLQPEGAQHILRDTDELSALHNVSYQLLAGSLAPRKKFLAVGMASVQRPRGFYLLATLQSLFSQSTEEELQEMVVVVHLADTDPGWNVRVAATVAHKFAHHILLGRLLLIHAPPEFYPTLEGLKRNFNDAEERVRFRSKQNVDYAFLLAFAANLSSYYLMIEDDVWSARSFLTAIRRALASQQGSNWATLEFSKLGYIGKLYRSSDLPRLARFLLLFYQEMPCDWLLVHFRQLLAQKDVIRFRPSLFQHMGLYSSFQGTVNRLEDEDFQADASDLPDNPPASLHTSMSVFENYEPHKAYSSAQGYFWGKAPAAGSTFSIVFRQPAHVSRVRVRTGSVERPGDFLHAGLLELGWSRDHSQDCSSYVPVGSFKRGTLEQRGLETVLPGPVECVRIRVTQDQSEWLIIQSIDIWTTAGT
SIO_010081: LOC107214888
subclass of: SO_0000673
so part of: LOC107214888
location: join(440282..440625,442986..443112,443386..443533,444470..445611)
location: region:440282-445611:1
so has part: feature:440282-440625:1:exon
so has part: feature:442986-443112:1:exon
so has part: feature:443386-443533:1:exon
so has part: feature:444470-445611:1:exon

XP_015506149.1
type: Protein
SIO_000068: ncbiprotein

position:440282:1
position: 440282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445611:1
position: 445611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440282-440625:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:442986-443112:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:443386-443533:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:444470-445611:1:exon

LOC107214888
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107214888
product: alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_015650671.2
SIO_010081: LOC107214888
subclass of: SO_0000673
so part of: LOC107214888
location: join(440536..440625,442337..442418,442986..443112,443386..443533,444470..445724)
location: region:440536-445724:1
so has part: feature:440536-440625:1:exon
so has part: feature:442337-442418:1:exon
so has part: feature:442986-443112:1:exon
so has part: feature:443386-443533:1:exon
so has part: feature:444470-445724:1:exon

position:440536:1
position: 440536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440536-440625:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:442337-442418:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:442986-443112:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:443386-443533:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:444470-445724:1:exon

LOC107214888
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107214888
product: alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_015650669.3
SIO_010081: LOC107214888
subclass of: SO_0000673
so part of: LOC107214888
location: join(440731..442418,442986..443112,443386..443533,444470..445724)
location: region:440731-445724:1
so has part: feature:440731-442418:1:exon
so has part: feature:442986-443112:1:exon
so has part: feature:443386-443533:1:exon
so has part: feature:444470-445724:1:exon

position:440731:1
position: 440731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440731-442418:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:442986-443112:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:443386-443533:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:444470-445724:1:exon

LOC107214888
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107214888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like isoform X2
translation: MRCSLKRSLMVLLTASFLLLLLLLHGGSRQEQDPLKVELRGLAPDTILQLLQPEGAQHILRDTDELSALHNVSYQLLAGSLAPRKKFLAVGMASVQRPRGFYLLATLQSLFSQSTEEELQEMVVVVHLADTDPGWNVRVAATVAHKFAHHILLGRLLLIHAPPEFYPTLEGLKRNFNDAEERVRFRSKQNVDYAFLLAFAANLSSYYLMIEDDVWSARSFLTAIRRALASQQGSNWATLEFSKLGYIGKLYRSSDLPRLARFLLLFYQEMPCDWLLVHFRQLLAQKDVIRFRPSLFQHMGLYSSFQGTVNRLEDEDFQADASDLPDNPPASLHTSMSVFENYEPHKAYSSAQGYFWGKAPAAGSTFSIVFRQPAHVSRVRVRTGSVERPGDFLHAGLLELGWSRDHSQDCSSYVPVGSFKRGTLEQRGLETVLPGPVECVRIRVTQDQSEWLIIQSIDIWTTAGT
SIO_010081: LOC107214888
subclass of: SO_0000673
so part of: LOC107214888
location: join(443005..443112,443386..443533,444470..445611)
location: region:443005-445611:1
so has part: feature:443005-443112:1:exon
so has part: feature:443386-443533:1:exon
so has part: feature:444470-445611:1:exon

XP_033375887.1
type: Protein
SIO_000068: ncbiprotein

position:443005:1
position: 443005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443005-443112:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443386-443533:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:444470-445611:1:exon

LOC107214888
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107214888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like isoform X2
translation: MRCSLKRSLMVLLTASFLLLLLLLHGGSRQEQDPLKVELRGLAPDTILQLLQPEGAQHILRDTDELSALHNVSYQLLAGSLAPRKKFLAVGMASVQRPRGFYLLATLQSLFSQSTEEELQEMVVVVHLADTDPGWNVRVAATVAHKFAHHILLGRLLLIHAPPEFYPTLEGLKRNFNDAEERVRFRSKQNVDYAFLLAFAANLSSYYLMIEDDVWSARSFLTAIRRALASQQGSNWATLEFSKLGYIGKLYRSSDLPRLARFLLLFYQEMPCDWLLVHFRQLLAQKDVIRFRPSLFQHMGLYSSFQGTVNRLEDEDFQADASDLPDNPPASLHTSMSVFENYEPHKAYSSAQGYFWGKAPAAGSTFSIVFRQPAHVSRVRVRTGSVERPGDFLHAGLLELGWSRDHSQDCSSYVPVGSFKRGTLEQRGLETVLPGPVECVRIRVTQDQSEWLIIQSIDIWTTAGT
SIO_010081: LOC107214888
subclass of: SO_0000673
so part of: LOC107214888
location: join(443005..443112,443386..443533,444470..445611)
location: region:443005-445611:1
so has part: feature:443005-443112:1:exon
so has part: feature:443386-443533:1:exon
so has part: feature:444470-445611:1:exon

XP_033375888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:443005-443112:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443386-443533:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:444470-445611:1:exon

LOC107214888
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107214888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like isoform X2
translation: MRCSLKRSLMVLLTASFLLLLLLLHGGSRQEQDPLKVELRGLAPDTILQLLQPEGAQHILRDTDELSALHNVSYQLLAGSLAPRKKFLAVGMASVQRPRGFYLLATLQSLFSQSTEEELQEMVVVVHLADTDPGWNVRVAATVAHKFAHHILLGRLLLIHAPPEFYPTLEGLKRNFNDAEERVRFRSKQNVDYAFLLAFAANLSSYYLMIEDDVWSARSFLTAIRRALASQQGSNWATLEFSKLGYIGKLYRSSDLPRLARFLLLFYQEMPCDWLLVHFRQLLAQKDVIRFRPSLFQHMGLYSSFQGTVNRLEDEDFQADASDLPDNPPASLHTSMSVFENYEPHKAYSSAQGYFWGKAPAAGSTFSIVFRQPAHVSRVRVRTGSVERPGDFLHAGLLELGWSRDHSQDCSSYVPVGSFKRGTLEQRGLETVLPGPVECVRIRVTQDQSEWLIIQSIDIWTTAGT
SIO_010081: LOC107214888
subclass of: SO_0000673
so part of: LOC107214888
location: join(443005..443112,443386..443533,444470..445611)
location: region:443005-445611:1
so has part: feature:443005-443112:1:exon
so has part: feature:443386-443533:1:exon
so has part: feature:444470-445611:1:exon

XP_033375889.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:443005-443112:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443386-443533:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:444470-445611:1:exon

LOC107214888
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107214888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like isoform X2
translation: MRCSLKRSLMVLLTASFLLLLLLLHGGSRQEQDPLKVELRGLAPDTILQLLQPEGAQHILRDTDELSALHNVSYQLLAGSLAPRKKFLAVGMASVQRPRGFYLLATLQSLFSQSTEEELQEMVVVVHLADTDPGWNVRVAATVAHKFAHHILLGRLLLIHAPPEFYPTLEGLKRNFNDAEERVRFRSKQNVDYAFLLAFAANLSSYYLMIEDDVWSARSFLTAIRRALASQQGSNWATLEFSKLGYIGKLYRSSDLPRLARFLLLFYQEMPCDWLLVHFRQLLAQKDVIRFRPSLFQHMGLYSSFQGTVNRLEDEDFQADASDLPDNPPASLHTSMSVFENYEPHKAYSSAQGYFWGKAPAAGSTFSIVFRQPAHVSRVRVRTGSVERPGDFLHAGLLELGWSRDHSQDCSSYVPVGSFKRGTLEQRGLETVLPGPVECVRIRVTQDQSEWLIIQSIDIWTTAGT
SIO_010081: LOC107214888
subclass of: SO_0000673
so part of: LOC107214888
location: join(443005..443112,443386..443533,444470..445611)
location: region:443005-445611:1
so has part: feature:443005-443112:1:exon
so has part: feature:443386-443533:1:exon
so has part: feature:444470-445611:1:exon

XP_015506152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:443005-443112:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443386-443533:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:444470-445611:1:exon

LOC107214888
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107214888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like isoform X2
translation: MRCSLKRSLMVLLTASFLLLLLLLHGGSRQEQDPLKVELRGLAPDTILQLLQPEGAQHILRDTDELSALHNVSYQLLAGSLAPRKKFLAVGMASVQRPRGFYLLATLQSLFSQSTEEELQEMVVVVHLADTDPGWNVRVAATVAHKFAHHILLGRLLLIHAPPEFYPTLEGLKRNFNDAEERVRFRSKQNVDYAFLLAFAANLSSYYLMIEDDVWSARSFLTAIRRALASQQGSNWATLEFSKLGYIGKLYRSSDLPRLARFLLLFYQEMPCDWLLVHFRQLLAQKDVIRFRPSLFQHMGLYSSFQGTVNRLEDEDFQADASDLPDNPPASLHTSMSVFENYEPHKAYSSAQGYFWGKAPAAGSTFSIVFRQPAHVSRVRVRTGSVERPGDFLHAGLLELGWSRDHSQDCSSYVPVGSFKRGTLEQRGLETVLPGPVECVRIRVTQDQSEWLIIQSIDIWTTAGT
SIO_010081: LOC107214888
subclass of: SO_0000673
so part of: LOC107214888
location: join(443005..443112,443386..443533,444470..445611)
location: region:443005-445611:1
so has part: feature:443005-443112:1:exon
so has part: feature:443386-443533:1:exon
so has part: feature:444470-445611:1:exon

XP_015506154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:443005-443112:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443386-443533:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:444470-445611:1:exon

LOC107214888
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107214888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like isoform X2
translation: MRCSLKRSLMVLLTASFLLLLLLLHGGSRQEQDPLKVELRGLAPDTILQLLQPEGAQHILRDTDELSALHNVSYQLLAGSLAPRKKFLAVGMASVQRPRGFYLLATLQSLFSQSTEEELQEMVVVVHLADTDPGWNVRVAATVAHKFAHHILLGRLLLIHAPPEFYPTLEGLKRNFNDAEERVRFRSKQNVDYAFLLAFAANLSSYYLMIEDDVWSARSFLTAIRRALASQQGSNWATLEFSKLGYIGKLYRSSDLPRLARFLLLFYQEMPCDWLLVHFRQLLAQKDVIRFRPSLFQHMGLYSSFQGTVNRLEDEDFQADASDLPDNPPASLHTSMSVFENYEPHKAYSSAQGYFWGKAPAAGSTFSIVFRQPAHVSRVRVRTGSVERPGDFLHAGLLELGWSRDHSQDCSSYVPVGSFKRGTLEQRGLETVLPGPVECVRIRVTQDQSEWLIIQSIDIWTTAGT
SIO_010081: LOC107214888
subclass of: SO_0000673
so part of: LOC107214888
location: join(443005..443112,443386..443533,444470..445611)
location: region:443005-445611:1
so has part: feature:443005-443112:1:exon
so has part: feature:443386-443533:1:exon
so has part: feature:444470-445611:1:exon

XP_015506155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:443005-443112:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443386-443533:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:444470-445611:1:exon

LOC107214888
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107214888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like isoform X2
translation: MRCSLKRSLMVLLTASFLLLLLLLHGGSRQEQDPLKVELRGLAPDTILQLLQPEGAQHILRDTDELSALHNVSYQLLAGSLAPRKKFLAVGMASVQRPRGFYLLATLQSLFSQSTEEELQEMVVVVHLADTDPGWNVRVAATVAHKFAHHILLGRLLLIHAPPEFYPTLEGLKRNFNDAEERVRFRSKQNVDYAFLLAFAANLSSYYLMIEDDVWSARSFLTAIRRALASQQGSNWATLEFSKLGYIGKLYRSSDLPRLARFLLLFYQEMPCDWLLVHFRQLLAQKDVIRFRPSLFQHMGLYSSFQGTVNRLEDEDFQADASDLPDNPPASLHTSMSVFENYEPHKAYSSAQGYFWGKAPAAGSTFSIVFRQPAHVSRVRVRTGSVERPGDFLHAGLLELGWSRDHSQDCSSYVPVGSFKRGTLEQRGLETVLPGPVECVRIRVTQDQSEWLIIQSIDIWTTAGT
SIO_010081: LOC107214888
subclass of: SO_0000673
so part of: LOC107214888
location: join(443005..443112,443386..443533,444470..445611)
location: region:443005-445611:1
so has part: feature:443005-443112:1:exon
so has part: feature:443386-443533:1:exon
so has part: feature:444470-445611:1:exon

XP_015506157.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:443005-443112:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443386-443533:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:444470-445611:1:exon

TMEM9
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: TMEM9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(446876..451074)
location: region:446876-451074:-1
so has part: feature:446876-451074:-1:exon
subclass of: SO_0000010

107214890
type: Gene
SIO_000068: ncbigene

position:446876:-1
position: 446876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451074:-1
position: 451074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446876-451074:-1:exon

TMEM9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: TMEM9
product: transmembrane protein 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_015650674.3
SIO_010081: TMEM9
subclass of: SO_0000673
so part of: TMEM9
location: complement(join(446876..447922,449114..449245,450060..450168,450603..450694,450791..451074))
location: region:446876-451074:-1
so has part: feature:450791-451074:-1:exon
so has part: feature:450603-450694:-1:exon
so has part: feature:450060-450168:-1:exon
so has part: feature:449114-449245:-1:exon
so has part: feature:446876-447922:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:450791-451074:-1:exon

position:450791:-1
position: 450791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:450603-450694:-1:exon

position:450603:-1
position: 450603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450694:-1
position: 450694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:450060-450168:-1:exon

position:450060:-1
position: 450060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450168:-1
position: 450168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:449114-449245:-1:exon

position:449114:-1
position: 449114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449245:-1
position: 449245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:446876-447922:-1:exon

position:447922:-1
position: 447922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: TMEM9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 9
translation: MSAQSSRNSASPMLLLVLLGCVLCPPAQASKSSEDIRCKCICPPYRNISGHIYNKNVSQKDCNCLHVVEPMPVPGNDVEAYCLLCECKYEERSTTTIKVIIIIYLSVVGALLLYMAFLVLVDPLIRKPDPYTQPLHNEEDSEDTRSLAAVPTLAGARANTVLERMEGAQQRWKRQVQEQRKTVFDRHKMLS
SIO_010081: TMEM9
subclass of: SO_0000673
so part of: TMEM9
location: complement(join(447773..447922,449114..449245,450060..450168,450603..450694,450791..450883))
location: region:447773-450883:-1
so has part: feature:450791-450883:-1:exon
so has part: feature:450603-450694:-1:exon
so has part: feature:450060-450168:-1:exon
so has part: feature:449114-449245:-1:exon
so has part: feature:447773-447922:-1:exon

XP_015506160.1
type: Protein
SIO_000068: ncbiprotein

position:447773:-1
position: 447773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450883:-1
position: 450883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450791-450883:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:450603-450694:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:450060-450168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:449114-449245:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:447773-447922:-1:exon

IGFN1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: IGFN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 481181..522086
location: region:481181-522086:1
so has part: feature:481181-522086:1:exon
subclass of: SO_0000010

107214750
type: Gene
SIO_000068: ncbigene

position:481181:1
position: 481181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522086:1
position: 522086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481181-522086:1:exon

IGFN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: IGFN1
product: immunoglobulin like and fibronectin type III domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015650404.3
SIO_010081: IGFN1
subclass of: SO_0000673
so part of: IGFN1
location: join(481181..481290,487012..487138,491847..491915,492732..492854,494947..495086,495626..495725,496487..496534,497054..497099,498152..498326,498546..498744,502185..502457,504150..505579,507244..508018,509237..509361,509781..509922,510876..511172,512457..512756,513634..513807,514194..514322,514753..515028,515828..515848,516714..516802,517903..518098,519229..519528,519985..520311,521047..522086)
location: region:481181-522086:1
so has part: feature:481181-481290:1:exon
so has part: feature:487012-487138:1:exon
so has part: feature:491847-491915:1:exon
so has part: feature:492732-492854:1:exon
so has part: feature:494947-495086:1:exon
so has part: feature:495626-495725:1:exon
so has part: feature:496487-496534:1:exon
so has part: feature:497054-497099:1:exon
so has part: feature:498152-498326:1:exon
so has part: feature:498546-498744:1:exon
so has part: feature:502185-502457:1:exon
so has part: feature:504150-505579:1:exon
so has part: feature:507244-508018:1:exon
so has part: feature:509237-509361:1:exon
so has part: feature:509781-509922:1:exon
so has part: feature:510876-511172:1:exon
so has part: feature:512457-512756:1:exon
so has part: feature:513634-513807:1:exon
so has part: feature:514194-514322:1:exon
so has part: feature:514753-515028:1:exon
so has part: feature:515828-515848:1:exon
so has part: feature:516714-516802:1:exon
so has part: feature:517903-518098:1:exon
so has part: feature:519229-519528:1:exon
so has part: feature:519985-520311:1:exon
so has part: feature:521047-522086:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:481181-481290:1:exon

position:481290:1
position: 481290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:487012-487138:1:exon

position:487012:1
position: 487012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487138:1
position: 487138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:491847-491915:1:exon

position:491847:1
position: 491847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491915:1
position: 491915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:492732-492854:1:exon

position:492732:1
position: 492732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492854:1
position: 492854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:494947-495086:1:exon

position:494947:1
position: 494947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495086:1
position: 495086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:495626-495725:1:exon

position:495626:1
position: 495626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495725:1
position: 495725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:496487-496534:1:exon

position:496487:1
position: 496487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496534:1
position: 496534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:497054-497099:1:exon

position:497054:1
position: 497054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497099:1
position: 497099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:498152-498326:1:exon

position:498152:1
position: 498152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498326:1
position: 498326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:498546-498744:1:exon

position:498546:1
position: 498546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498744:1
position: 498744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:502185-502457:1:exon

position:502185:1
position: 502185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502457:1
position: 502457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:504150-505579:1:exon

position:504150:1
position: 504150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505579:1
position: 505579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:507244-508018:1:exon

position:507244:1
position: 507244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508018:1
position: 508018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:509237-509361:1:exon

position:509237:1
position: 509237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509361:1
position: 509361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:509781-509922:1:exon

position:509781:1
position: 509781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509922:1
position: 509922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:510876-511172:1:exon

position:510876:1
position: 510876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511172:1
position: 511172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:512457-512756:1:exon

position:512457:1
position: 512457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512756:1
position: 512756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:513634-513807:1:exon

position:513634:1
position: 513634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513807:1
position: 513807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:514194-514322:1:exon

position:514194:1
position: 514194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514322:1
position: 514322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:514753-515028:1:exon

position:514753:1
position: 514753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515028:1
position: 515028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:515828-515848:1:exon

position:515828:1
position: 515828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515848:1
position: 515848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:516714-516802:1:exon

position:516714:1
position: 516714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516802:1
position: 516802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:517903-518098:1:exon

position:517903:1
position: 517903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518098:1
position: 518098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:519229-519528:1:exon

position:519229:1
position: 519229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519528:1
position: 519528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:519985-520311:1:exon

position:519985:1
position: 519985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520311:1
position: 520311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:521047-522086:1:exon

position:521047:1
position: 521047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IGFN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: IGFN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: immunoglobulin-like and fibronectin type III domain-containing protein 1
translation: MNSHQPVKIFKKSSIPGVVVTQFVNDVPQGCSTPDFEKKPLTLTLQEGKNAIFRAVVKGVPTPEVKWSRTRKAMDDSAKYEMSFNSATNEFILQIRSVVVDDSDLYRCCAINAYGEASCSAGLRIIQVGFKRKAKYVPVHAADELKKTLLDSKKLLRKRAAAPKPKPLDKEAVWQLLLHADKRDYEKICMKYGIVDFRGMLRKLQEMRKDTESEQDKLIHSLKNFEHIRVNKEGNATFSLEMELKNSNSNVYLLKVRGMSWAAAAWSSPSSVPQERFQLLGSGSIPVRFRQALADVRCAEAADARFQCELCTPCHEPLWLHKSHPLQNSAKHQISVSPDGLSHELTVRNVGPSDSGLYTLDAGHGSSSAWLLVEYAKGKRRQDEGEKIERETSEWLKEAMADNERARKLRRQEQAAAEDSSFSTSSAAEKSAWYRTTQGSSQGRGQGHSIDSDDGSQRFLGKEGLRKTHMNGETGSGQFSGAGLDGDSAGNGGSTFGLKGLGGRSGLRAVHGVDSVSGPGAAAGGAGEWNSVGGRGEGVLGAVNIDMDDGGGLGSQHDKEGNSGDASYRAGFGGAGRLGGGSSVPGGLDPDSAGVGASVNDLFSRTGAGGNAAGAGMAAEMRSHHGKDGHPTVGDVYGGINREGQTGTPYGKDGLVPHASGQLGQAGRSGSLHGPGGFPGGDGAVPAAHGNSTREMEALYGPDGRALGAGAGGAGGAGAGGFGAPYGKDGLPIGAGIGGAGGAGALGSPFGKDGLPAGAGGAGGFGEALYGPDGQPLGAGGGGASGAGRVGGSYGKDGLPAGAGVGGAVGGGFGGAGSPYGMDAFPAGASVGGPGAGGLGAPYGKDGLPAGDGLPAGAGVGGAGGVLGPYGKGGLPGVAGAAHFLPGGEEMVGSGCGTDGTLSRAPGYAGGAGGEGFSREGSAPWGAGSAYGKDRGSAVAMAGAGGVGSLGGDEWDSVHVKEGVGGAGGSRGEYGLDAHPGRSSRGETGKGTPGDVQGPGNKGSAGDRGSLSGPGGARAEGRDLGQLGSPYGINSAFGKAGSKSHDRSVDGSGLGQGPLGYGQMSGPFGGPPSANQRNQEPDLDLKANDSLKNTESTGQKRRSVLDDLKVPRCYLNKQLATVRVQKGEPAELSCTVSKDNVTGTWFKDGLKLTSMDGVVFEKKGFVHKLIINKAEDIHAGKYRFEGGDVKTEASIFVEDPPQVDKVLLKNLTSVPTVAKAGEAVKLRIPFKGRGPIRAAWLKDRMELGDDTRIRVDKTDTCTTLSISSCSRRDCGDYKVRLKNDSGTLEINLKLVVIDKPQAPAGPIKIVESSANNITIQWKPPKDDGGKPVQRYLIERQQVGRNDWETLGETPRSCSTFTTSKVEEDVSYYFRVRAMNAEGVSDALESGEVKAAGKASPGAPDPPEIISASRDTITISWKAPCKTGTSQIMGYIVQKRKKGTVTWLPVTKVPVKDKKLKVTSLKKGVQYEFRVAAVNAAGTGQPSDPSEAAFAQDPTKSPGQVQDLRVSSSDSTSITLTWNKPEVQDGNDVKGYEVEMRPCNSSRWTKCFTLPAESTCCRLQGLQAGEKLLLRVTALGTSGHGEPLELEACAEPHLISPRFLIDDTVKSFLVIKAGNPIQVKIPFEGSPETVVTWLKDGLPLPSRAAVSTKDGSAQLLLRAAEISDSGTYSIELGDGLGKRETFSFQLQITDVPQPPGAIQLQENVPNTVTVTWDPSASEKWEKNLYYTVLKRESQKGLWHVLGDLIYNNKFTFTRVVPGRDYYFRVVAKNDLGASDPSETVQPWRIWKKKAEFRVQAQKYRGVNQNQPPRFLVPLKCHVVVTGSECRMSCAVGGHPPPKIKWYKDSRDLSRDPNYFCTNDFGVCSLVVLGVTKQDEGEYMVEASNEMGRAFSKAFLAIKDSSL
SIO_010081: IGFN1
subclass of: SO_0000673
so part of: IGFN1
location: join(491897..491915,492732..492854,494947..495086,495626..495725,496487..496534,497054..497099,498152..498326,498546..498744,502185..502457,504150..505579,507244..508018,509237..509361,509781..509922,510876..511172,512457..512756,513634..513807,514194..514322,514753..515028,515828..515848,516714..516802,517903..518098,519229..519528,519985..520311,521047..521060)
location: region:491897-521060:1
so has part: feature:491897-491915:1:exon
so has part: feature:492732-492854:1:exon
so has part: feature:494947-495086:1:exon
so has part: feature:495626-495725:1:exon
so has part: feature:496487-496534:1:exon
so has part: feature:497054-497099:1:exon
so has part: feature:498152-498326:1:exon
so has part: feature:498546-498744:1:exon
so has part: feature:502185-502457:1:exon
so has part: feature:504150-505579:1:exon
so has part: feature:507244-508018:1:exon
so has part: feature:509237-509361:1:exon
so has part: feature:509781-509922:1:exon
so has part: feature:510876-511172:1:exon
so has part: feature:512457-512756:1:exon
so has part: feature:513634-513807:1:exon
so has part: feature:514194-514322:1:exon
so has part: feature:514753-515028:1:exon
so has part: feature:515828-515848:1:exon
so has part: feature:516714-516802:1:exon
so has part: feature:517903-518098:1:exon
so has part: feature:519229-519528:1:exon
so has part: feature:519985-520311:1:exon
so has part: feature:521047-521060:1:exon

XP_015505890.1
type: Protein
SIO_000068: ncbiprotein

position:491897:1
position: 491897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521060:1
position: 521060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491897-491915:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:492732-492854:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:494947-495086:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:495626-495725:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:496487-496534:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:497054-497099:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:498152-498326:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:498546-498744:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:502185-502457:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:504150-505579:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:507244-508018:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:509237-509361:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:509781-509922:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:510876-511172:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:512457-512756:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:513634-513807:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:514194-514322:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:514753-515028:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:515828-515848:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:516714-516802:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:517903-518098:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:519229-519528:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:519985-520311:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:521047-521060:1:exon

PKP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: PKP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 539815..588039
location: region:539815-588039:1
so has part: feature:539815-588039:1:exon
subclass of: SO_0000010

107214718
type: Gene
SIO_000068: ncbigene

position:539815:1
position: 539815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:588039:1
position: 588039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:539815-588039:1:exon

PKP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PKP1
product: plakophilin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_015650358.3
SIO_010081: PKP1
subclass of: SO_0000673
so part of: PKP1
location: join(539815..540241,547732..547832,559146..559564,567605..567749,569837..570044,570715..570892,572935..573049,574138..574293,574391..574567,576871..577024,577432..577618,582338..582422,583820..583924,584808..588039)
location: region:539815-588039:1
so has part: feature:539815-540241:1:exon
so has part: feature:547732-547832:1:exon
so has part: feature:559146-559564:1:exon
so has part: feature:567605-567749:1:exon
so has part: feature:569837-570044:1:exon
so has part: feature:570715-570892:1:exon
so has part: feature:572935-573049:1:exon
so has part: feature:574138-574293:1:exon
so has part: feature:574391-574567:1:exon
so has part: feature:576871-577024:1:exon
so has part: feature:577432-577618:1:exon
so has part: feature:582338-582422:1:exon
so has part: feature:583820-583924:1:exon
so has part: feature:584808-588039:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:539815-540241:1:exon

position:540241:1
position: 540241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:547732-547832:1:exon

position:547732:1
position: 547732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:547832:1
position: 547832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:559146-559564:1:exon

position:559146:1
position: 559146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559564:1
position: 559564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:567605-567749:1:exon

position:567605:1
position: 567605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567749:1
position: 567749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:569837-570044:1:exon

position:569837:1
position: 569837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570044:1
position: 570044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:570715-570892:1:exon

position:570715:1
position: 570715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570892:1
position: 570892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:572935-573049:1:exon

position:572935:1
position: 572935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573049:1
position: 573049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:574138-574293:1:exon

position:574138:1
position: 574138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574293:1
position: 574293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:574391-574567:1:exon

position:574391:1
position: 574391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574567:1
position: 574567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:576871-577024:1:exon

position:576871:1
position: 576871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577024:1
position: 577024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:577432-577618:1:exon

position:577432:1
position: 577432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577618:1
position: 577618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:582338-582422:1:exon

position:582338:1
position: 582338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:582422:1
position: 582422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:583820-583924:1:exon

position:583820:1
position: 583820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583924:1
position: 583924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:584808-588039:1:exon

position:584808:1
position: 584808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PKP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PKP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plakophilin-1
translation: MLHSPLKTALAYECFQDQASSTLALPSDHKLKTKGTGKQRVQEQVMMTVKRQKQKSSVSSSVGHSNRGSMYDGLADGYGYGTSRGSYYTKTQAGNSSWGYPLYNGTLKRDAESRRYSSYSQMEGWASRAHGKALCSPRAGSDYCFVQNIKSSRSEPDLYCEPPRGTLRKAHGGRAEHKATLNRQSIYSSCSTQQGTSRTSKKMPARALSCPSSNKADVVYAQPVMSCKQDGLYGQAQSGSRICGDEIDAGTMTIQKAIQLLCSSDDKYQAMGAYYLQHTCFQDESAKQEVYRLGGIAKLVELLRSQNQNVQRAAAGALRNLVFKNPTNKMETRRQNGIRECVSLLRRTGNTEIQKQLTGLLWNLSSTDELKEELIQEALPVLTDCVIIPFSGWSDGSCNRTREIIDPEVFFNATGCLRNLSSADMGRQTMRNYPGLIDSVMTYAQNCVASNRPDDKSVENCICILHNLSYRLDAEVPNKYTQLNHMARSVYMDKTLTGCFNSRSGKMENDEYGVPLPEEDFKPKGPSWLYHSDAIRTYLSLMDQSKKDATLEACAGALQNLTASRGLMSNAMSQMIGMKEKGLPRIARLLQSNSAEVVRSGASLLSNMSRHPVLHKTMAHQVLPDVSRLLSFQSGNTSSYGEIMTSACYTLRNLIMSNPHLGKSYLSSNLLNNVVSLCRNGSCPKAAEAARLLLTDLWSNRELQSVLKQQGFDKNMMGSLAGTTFRTLSSRF
SIO_010081: PKP1
subclass of: SO_0000673
so part of: PKP1
location: join(540040..540241,547732..547832,559146..559564,567605..567749,569837..570044,570715..570892,572935..573049,574138..574293,574391..574567,576871..577024,577432..577618,582338..582422,583820..583891)
location: region:540040-583891:1
so has part: feature:540040-540241:1:exon
so has part: feature:547732-547832:1:exon
so has part: feature:559146-559564:1:exon
so has part: feature:567605-567749:1:exon
so has part: feature:569837-570044:1:exon
so has part: feature:570715-570892:1:exon
so has part: feature:572935-573049:1:exon
so has part: feature:574138-574293:1:exon
so has part: feature:574391-574567:1:exon
so has part: feature:576871-577024:1:exon
so has part: feature:577432-577618:1:exon
so has part: feature:582338-582422:1:exon
so has part: feature:583820-583891:1:exon

XP_015505844.1
type: Protein
SIO_000068: ncbiprotein

position:540040:1
position: 540040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583891:1
position: 583891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540040-540241:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:547732-547832:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:559146-559564:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:567605-567749:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:569837-570044:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:570715-570892:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:572935-573049:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:574138-574293:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:574391-574567:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:576871-577024:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:577432-577618:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:582338-582422:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:583820-583891:1:exon

TNNT2
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: TNNT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(599880..614020)
location: region:599880-614020:-1
so has part: feature:599880-614020:-1:exon
subclass of: SO_0000010

107214732
type: Gene
SIO_000068: ncbigene

position:599880:-1
position: 599880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614020:-1
position: 614020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:599880-614020:-1:exon

TNNT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: TNNT2
product: troponin T2, cardiac type, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033519933.1
SIO_010081: TNNT2
subclass of: SO_0000673
so part of: TNNT2
location: complement(join(599880..600085,600944..600949,601609..601649,602109..602199,602639..602748,603138..603248,604103..604180,604773..604889,604985..605045,605870..605891,606509..606544,607023..607055,607559..607615,608317..608343,609644..609661,609778..609788,610607..610654,613829..614020))
location: region:599880-614020:-1
so has part: feature:613829-614020:-1:exon
so has part: feature:610607-610654:-1:exon
so has part: feature:609778-609788:-1:exon
so has part: feature:609644-609661:-1:exon
so has part: feature:608317-608343:-1:exon
so has part: feature:607559-607615:-1:exon
so has part: feature:607023-607055:-1:exon
so has part: feature:606509-606544:-1:exon
so has part: feature:605870-605891:-1:exon
so has part: feature:604985-605045:-1:exon
so has part: feature:604773-604889:-1:exon
so has part: feature:604103-604180:-1:exon
so has part: feature:603138-603248:-1:exon
so has part: feature:602639-602748:-1:exon
so has part: feature:602109-602199:-1:exon
so has part: feature:601609-601649:-1:exon
so has part: feature:600944-600949:-1:exon
so has part: feature:599880-600085:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:613829-614020:-1:exon

position:613829:-1
position: 613829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:610607-610654:-1:exon

position:610607:-1
position: 610607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610654:-1
position: 610654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:609778-609788:-1:exon

position:609778:-1
position: 609778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609788:-1
position: 609788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:609644-609661:-1:exon

position:609644:-1
position: 609644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609661:-1
position: 609661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:608317-608343:-1:exon

position:608317:-1
position: 608317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:608343:-1
position: 608343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:607559-607615:-1:exon

position:607559:-1
position: 607559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607615:-1
position: 607615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:607023-607055:-1:exon

position:607023:-1
position: 607023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607055:-1
position: 607055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:606509-606544:-1:exon

position:606509:-1
position: 606509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606544:-1
position: 606544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:605870-605891:-1:exon

position:605870:-1
position: 605870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605891:-1
position: 605891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:604985-605045:-1:exon

position:604985:-1
position: 604985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605045:-1
position: 605045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:604773-604889:-1:exon

position:604773:-1
position: 604773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604889:-1
position: 604889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:604103-604180:-1:exon

position:604103:-1
position: 604103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604180:-1
position: 604180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:603138-603248:-1:exon

position:603138:-1
position: 603138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603248:-1
position: 603248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:602639-602748:-1:exon

position:602639:-1
position: 602639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602748:-1
position: 602748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:602109-602199:-1:exon

position:602109:-1
position: 602109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602199:-1
position: 602199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:601609-601649:-1:exon

position:601609:-1
position: 601609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601649:-1
position: 601649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:600944-600949:-1:exon

position:600944:-1
position: 600944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600949:-1
position: 600949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:599880-600085:-1:exon

position:600085:-1
position: 600085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TNNT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: TNNT2
product: troponin T2, cardiac type, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033519934.1
SIO_010081: TNNT2
subclass of: SO_0000673
so part of: TNNT2
location: complement(join(599880..600085,600944..600949,601609..601649,602109..602199,602639..602748,603138..603248,604103..604180,604773..604889,604985..605045,605870..605891,606509..606544,607559..607615,608317..608346,609644..609661,609778..609788,610607..610654,613829..614020))
location: region:599880-614020:-1
so has part: feature:613829-614020:-1:exon
so has part: feature:610607-610654:-1:exon
so has part: feature:609778-609788:-1:exon
so has part: feature:609644-609661:-1:exon
so has part: feature:608317-608346:-1:exon
so has part: feature:607559-607615:-1:exon
so has part: feature:606509-606544:-1:exon
so has part: feature:605870-605891:-1:exon
so has part: feature:604985-605045:-1:exon
so has part: feature:604773-604889:-1:exon
so has part: feature:604103-604180:-1:exon
so has part: feature:603138-603248:-1:exon
so has part: feature:602639-602748:-1:exon
so has part: feature:602109-602199:-1:exon
so has part: feature:601609-601649:-1:exon
so has part: feature:600944-600949:-1:exon
so has part: feature:599880-600085:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:613829-614020:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:610607-610654:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:609778-609788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:609644-609661:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:608317-608346:-1:exon

position:608346:-1
position: 608346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:607559-607615:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:606509-606544:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:605870-605891:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:604985-605045:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:604773-604889:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:604103-604180:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:603138-603248:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:602639-602748:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:602109-602199:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:601609-601649:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:600944-600949:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:599880-600085:-1:exon

TNNT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: TNNT2
product: troponin T2, cardiac type, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 47 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_015650379.3
SIO_010081: TNNT2
subclass of: SO_0000673
so part of: TNNT2
location: complement(join(599880..600085,601609..601649,602109..602199,602639..602748,603138..603248,604103..604180,604773..604889,604985..605045,605870..605891,606509..606544,607023..607055,607559..607615,608317..608346,609644..609661,609778..609788,610607..610654,613829..614020))
location: region:599880-614020:-1
so has part: feature:613829-614020:-1:exon
so has part: feature:610607-610654:-1:exon
so has part: feature:609778-609788:-1:exon
so has part: feature:609644-609661:-1:exon
so has part: feature:608317-608346:-1:exon
so has part: feature:607559-607615:-1:exon
so has part: feature:607023-607055:-1:exon
so has part: feature:606509-606544:-1:exon
so has part: feature:605870-605891:-1:exon
so has part: feature:604985-605045:-1:exon
so has part: feature:604773-604889:-1:exon
so has part: feature:604103-604180:-1:exon
so has part: feature:603138-603248:-1:exon
so has part: feature:602639-602748:-1:exon
so has part: feature:602109-602199:-1:exon
so has part: feature:601609-601649:-1:exon
so has part: feature:599880-600085:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:613829-614020:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:610607-610654:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:609778-609788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:609644-609661:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:608317-608346:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:607559-607615:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:607023-607055:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:606509-606544:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:605870-605891:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:604985-605045:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:604773-604889:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:604103-604180:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:603138-603248:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:602639-602748:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:602109-602199:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:601609-601649:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:599880-600085:-1:exon

TNNT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: TNNT2
product: troponin T2, cardiac type, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_019009023.2
SIO_010081: TNNT2
subclass of: SO_0000673
so part of: TNNT2
location: complement(join(599880..600085,600944..600949,601609..601649,602109..602199,602639..602748,603138..603248,604103..604180,604773..604889,604985..605045,605870..605891,606509..606544,607023..607055,607559..607615,608317..608346,609644..609661,609778..609788,610607..610649,613829..613947))
location: region:599880-613947:-1
so has part: feature:613829-613947:-1:exon
so has part: feature:610607-610649:-1:exon
so has part: feature:609778-609788:-1:exon
so has part: feature:609644-609661:-1:exon
so has part: feature:608317-608346:-1:exon
so has part: feature:607559-607615:-1:exon
so has part: feature:607023-607055:-1:exon
so has part: feature:606509-606544:-1:exon
so has part: feature:605870-605891:-1:exon
so has part: feature:604985-605045:-1:exon
so has part: feature:604773-604889:-1:exon
so has part: feature:604103-604180:-1:exon
so has part: feature:603138-603248:-1:exon
so has part: feature:602639-602748:-1:exon
so has part: feature:602109-602199:-1:exon
so has part: feature:601609-601649:-1:exon
so has part: feature:600944-600949:-1:exon
so has part: feature:599880-600085:-1:exon

position:613947:-1
position: 613947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:613829-613947:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:610607-610649:-1:exon

position:610649:-1
position: 610649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:609778-609788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:609644-609661:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:608317-608346:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:607559-607615:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:607023-607055:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:606509-606544:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:605870-605891:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:604985-605045:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:604773-604889:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:604103-604180:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:603138-603248:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:602639-602748:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:602109-602199:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:601609-601649:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:600944-600949:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:599880-600085:-1:exon

TNNT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: TNNT2
product: troponin T2, cardiac type, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 51 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_019009024.1
SIO_010081: TNNT2
subclass of: SO_0000673
so part of: TNNT2
location: complement(join(599880..600085,600944..600949,601609..601649,602109..602199,602639..602748,603138..603248,604103..604180,604773..604889,604985..605045,605870..605891,606509..606544,607023..607055,607559..607615,609644..609661,609778..609788,610607..610654,613829..613947))
location: region:599880-613947:-1
so has part: feature:613829-613947:-1:exon
so has part: feature:610607-610654:-1:exon
so has part: feature:609778-609788:-1:exon
so has part: feature:609644-609661:-1:exon
so has part: feature:607559-607615:-1:exon
so has part: feature:607023-607055:-1:exon
so has part: feature:606509-606544:-1:exon
so has part: feature:605870-605891:-1:exon
so has part: feature:604985-605045:-1:exon
so has part: feature:604773-604889:-1:exon
so has part: feature:604103-604180:-1:exon
so has part: feature:603138-603248:-1:exon
so has part: feature:602639-602748:-1:exon
so has part: feature:602109-602199:-1:exon
so has part: feature:601609-601649:-1:exon
so has part: feature:600944-600949:-1:exon
so has part: feature:599880-600085:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:613829-613947:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:610607-610654:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:609778-609788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:609644-609661:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:607559-607615:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:607023-607055:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:606509-606544:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:605870-605891:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:604985-605045:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:604773-604889:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:604103-604180:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:603138-603248:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:602639-602748:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:602109-602199:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:601609-601649:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:600944-600949:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:599880-600085:-1:exon

TNNT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: TNNT2
product: troponin T2, cardiac type, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_015650376.2
SIO_010081: TNNT2
subclass of: SO_0000673
so part of: TNNT2
location: complement(join(599880..600085,600944..600949,601609..601649,602109..602199,602639..602748,603138..603248,604103..604180,604773..604889,604985..605045,605870..605891,606509..606544,607023..607055,607559..607615,608317..608346,609644..609661,609778..609788,610607..610654,613829..613947))
location: region:599880-613947:-1
so has part: feature:613829-613947:-1:exon
so has part: feature:610607-610654:-1:exon
so has part: feature:609778-609788:-1:exon
so has part: feature:609644-609661:-1:exon
so has part: feature:608317-608346:-1:exon
so has part: feature:607559-607615:-1:exon
so has part: feature:607023-607055:-1:exon
so has part: feature:606509-606544:-1:exon
so has part: feature:605870-605891:-1:exon
so has part: feature:604985-605045:-1:exon
so has part: feature:604773-604889:-1:exon
so has part: feature:604103-604180:-1:exon
so has part: feature:603138-603248:-1:exon
so has part: feature:602639-602748:-1:exon
so has part: feature:602109-602199:-1:exon
so has part: feature:601609-601649:-1:exon
so has part: feature:600944-600949:-1:exon
so has part: feature:599880-600085:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:613829-613947:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:610607-610654:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:609778-609788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:609644-609661:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:608317-608346:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:607559-607615:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:607023-607055:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:606509-606544:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:605870-605891:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:604985-605045:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:604773-604889:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:604103-604180:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:603138-603248:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:602639-602748:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:602109-602199:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:601609-601649:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:600944-600949:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:599880-600085:-1:exon

TNNT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: TNNT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: troponin T, cardiac muscle isoform X4
translation: MSDTEEVTEEYEQEQEEECVEEGQEEQVEEEEEETKETKAEEQEDETKAAGEGGEGEREQEPGEGESKPKPKVFMPNLVPPKIPDGERLDFDDIHRKRMEKDLNELQALIEAHFESRKKEEEELLSLKDRIEQRRAERAEQQRIRSEREKERQARMAEERARKEEEEARKRAEEEARKKKAFSNMLHFGGYMQKSEKKGGKKQTEREKKKKILSERRKPLNIDHLSEDKLRDKAKELWQNIHDLEAEKFDLQEKFKRQKYEINVLRNRISDHQKVKGSKGARGKTMVGSRRK
SIO_010081: TNNT2
subclass of: SO_0000673
so part of: TNNT2
location: complement(join(600037..600085,600944..600949,601609..601649,602109..602199,602639..602748,603138..603248,604103..604180,604773..604889,604985..605045,605870..605891,606509..606544,607023..607055,607559..607615,609644..609661,609778..609788,610607..610644))
location: region:600037-610644:-1
so has part: feature:610607-610644:-1:exon
so has part: feature:609778-609788:-1:exon
so has part: feature:609644-609661:-1:exon
so has part: feature:607559-607615:-1:exon
so has part: feature:607023-607055:-1:exon
so has part: feature:606509-606544:-1:exon
so has part: feature:605870-605891:-1:exon
so has part: feature:604985-605045:-1:exon
so has part: feature:604773-604889:-1:exon
so has part: feature:604103-604180:-1:exon
so has part: feature:603138-603248:-1:exon
so has part: feature:602639-602748:-1:exon
so has part: feature:602109-602199:-1:exon
so has part: feature:601609-601649:-1:exon
so has part: feature:600944-600949:-1:exon
so has part: feature:600037-600085:-1:exon

XP_018864569.1
type: Protein
SIO_000068: ncbiprotein

position:600037:-1
position: 600037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610644:-1
position: 610644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:610607-610644:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609778-609788:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:609644-609661:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:607559-607615:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:607023-607055:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:606509-606544:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:605870-605891:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:604985-605045:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:604773-604889:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:604103-604180:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:603138-603248:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:602639-602748:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:602109-602199:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:601609-601649:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:600944-600949:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:600037-600085:-1:exon

TNNT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: TNNT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: troponin T, cardiac muscle isoform X2
translation: MSDTEEVTEEYEQEQEEECVEEEEEWIEEDDGQEEQVEEEEEETKETKAEEQEDETKAAGEGGEGEREQEPGEGESKPKPKVFMPNLVPPKIPDGERLDFDDIHRKRMEKDLNELQALIEAHFESRKKEEEELLSLKDRIEQRRAERAEQQRIRSEREKERQARMAEERARKEEEEARKRAEEEARKKKAFSNMLHFGGYMQKSEKKGGKKQTEREKKKKILSERRKPLNIDHLSEDKLRDKAKELWQNIHDLEAEKFDLQEKFKRQKYEINVLRNRISDHQKVKGSKGARGKTMVGSRRK
SIO_010081: TNNT2
subclass of: SO_0000673
so part of: TNNT2
location: complement(join(600037..600085,600944..600949,601609..601649,602109..602199,602639..602748,603138..603248,604103..604180,604773..604889,604985..605045,605870..605891,606509..606544,607023..607055,607559..607615,608317..608343,609644..609661,609778..609788,610607..610644))
location: region:600037-610644:-1
so has part: feature:610607-610644:-1:exon
so has part: feature:609778-609788:-1:exon
so has part: feature:609644-609661:-1:exon
so has part: feature:608317-608343:-1:exon
so has part: feature:607559-607615:-1:exon
so has part: feature:607023-607055:-1:exon
so has part: feature:606509-606544:-1:exon
so has part: feature:605870-605891:-1:exon
so has part: feature:604985-605045:-1:exon
so has part: feature:604773-604889:-1:exon
so has part: feature:604103-604180:-1:exon
so has part: feature:603138-603248:-1:exon
so has part: feature:602639-602748:-1:exon
so has part: feature:602109-602199:-1:exon
so has part: feature:601609-601649:-1:exon
so has part: feature:600944-600949:-1:exon
so has part: feature:600037-600085:-1:exon

XP_033375824.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:610607-610644:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609778-609788:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:609644-609661:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:608317-608343:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:607559-607615:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:607023-607055:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:606509-606544:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:605870-605891:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:604985-605045:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:604773-604889:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:604103-604180:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:603138-603248:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:602639-602748:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:602109-602199:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:601609-601649:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:600944-600949:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:600037-600085:-1:exon

TNNT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: TNNT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: troponin T, cardiac muscle isoform X5
translation: MSDTEEVTEEYEQEQEEECVEEEEEEWIEEDDGQEEQVEEEEEETKETKAEGGEGEREQEPGEGESKPKPKVFMPNLVPPKIPDGERLDFDDIHRKRMEKDLNELQALIEAHFESRKKEEEELLSLKDRIEQRRAERAEQQRIRSEREKERQARMAEERARKEEEEARKRAEEEARKKKAFSNMLHFGGYMQKSEKKGGKKQTEREKKKKILSERRKPLNIDHLSEDKLRDKAKELWQNIHDLEAEKFDLQEKFKRQKYEINVLRNRISDHQKVKGSKGARGKTMVGSRRK
SIO_010081: TNNT2
subclass of: SO_0000673
so part of: TNNT2
location: complement(join(600037..600085,600944..600949,601609..601649,602109..602199,602639..602748,603138..603248,604103..604180,604773..604889,604985..605045,605870..605891,606509..606544,607559..607615,608317..608346,609644..609661,609778..609788,610607..610644))
location: region:600037-610644:-1
so has part: feature:610607-610644:-1:exon
so has part: feature:609778-609788:-1:exon
so has part: feature:609644-609661:-1:exon
so has part: feature:608317-608346:-1:exon
so has part: feature:607559-607615:-1:exon
so has part: feature:606509-606544:-1:exon
so has part: feature:605870-605891:-1:exon
so has part: feature:604985-605045:-1:exon
so has part: feature:604773-604889:-1:exon
so has part: feature:604103-604180:-1:exon
so has part: feature:603138-603248:-1:exon
so has part: feature:602639-602748:-1:exon
so has part: feature:602109-602199:-1:exon
so has part: feature:601609-601649:-1:exon
so has part: feature:600944-600949:-1:exon
so has part: feature:600037-600085:-1:exon

XP_033375825.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:610607-610644:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609778-609788:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:609644-609661:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:608317-608346:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:607559-607615:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:606509-606544:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:605870-605891:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:604985-605045:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:604773-604889:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:604103-604180:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:603138-603248:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:602639-602748:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:602109-602199:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:601609-601649:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:600944-600949:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:600037-600085:-1:exon

TNNT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: TNNT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: troponin T, cardiac muscle isoform X3
translation: MSDTEEVTEEYEQEQEEECVEEEEEEWIEEDDGQEEQVEEEEEETKETKAEEQEDETKAAGEGGEGEREQEPGEGESKPKPKVFMPNLVPPKIPDGERLDFDDIHRKRMEKDLNELQALIEAHFESRKKEEEELLSLKDRIEQRRAERAEQQRIRSEREKERQARMAEERARKEEEEARKRAEEEARKKKAFSNMLHFGGYMQKSEKKGGKKQTEREKKKKILSERRKPLNIDHLSEDKLRDKAKELWQNIHDLEAEKFDLQEKFKRQKYEINVLRNRISDHQKVSKGARGKTMVGSRRK
SIO_010081: TNNT2
subclass of: SO_0000673
so part of: TNNT2
location: complement(join(600037..600085,601609..601649,602109..602199,602639..602748,603138..603248,604103..604180,604773..604889,604985..605045,605870..605891,606509..606544,607023..607055,607559..607615,608317..608346,609644..609661,609778..609788,610607..610644))
location: region:600037-610644:-1
so has part: feature:610607-610644:-1:exon
so has part: feature:609778-609788:-1:exon
so has part: feature:609644-609661:-1:exon
so has part: feature:608317-608346:-1:exon
so has part: feature:607559-607615:-1:exon
so has part: feature:607023-607055:-1:exon
so has part: feature:606509-606544:-1:exon
so has part: feature:605870-605891:-1:exon
so has part: feature:604985-605045:-1:exon
so has part: feature:604773-604889:-1:exon
so has part: feature:604103-604180:-1:exon
so has part: feature:603138-603248:-1:exon
so has part: feature:602639-602748:-1:exon
so has part: feature:602109-602199:-1:exon
so has part: feature:601609-601649:-1:exon
so has part: feature:600037-600085:-1:exon

XP_015505865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:610607-610644:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609778-609788:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:609644-609661:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:608317-608346:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:607559-607615:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:607023-607055:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:606509-606544:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:605870-605891:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:604985-605045:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:604773-604889:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:604103-604180:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:603138-603248:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:602639-602748:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:602109-602199:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:601609-601649:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:600037-600085:-1:exon

TNNT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: TNNT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: troponin T, cardiac muscle isoform X1
translation: MSDTEEVTEEYEQEQEEECVEEEEEEWIEEDDGQEEQVEEEEEETKETKAEEQEDETKAAGEGGEGEREQEPGEGESKPKPKVFMPNLVPPKIPDGERLDFDDIHRKRMEKDLNELQALIEAHFESRKKEEEELLSLKDRIEQRRAERAEQQRIRSEREKERQARMAEERARKEEEEARKRAEEEARKKKAFSNMLHFGGYMQKSEKKGGKKQTEREKKKKILSERRKPLNIDHLSEDKLRDKAKELWQNIHDLEAEKFDLQEKFKRQKYEINVLRNRISDHQKVKGSKGARGKTMVGSRRK
SIO_010081: TNNT2
subclass of: SO_0000673
so part of: TNNT2
location: complement(join(600037..600085,600944..600949,601609..601649,602109..602199,602639..602748,603138..603248,604103..604180,604773..604889,604985..605045,605870..605891,606509..606544,607023..607055,607559..607615,608317..608346,609644..609661,609778..609788,610607..610644))
location: region:600037-610644:-1
so has part: feature:610607-610644:-1:exon
so has part: feature:609778-609788:-1:exon
so has part: feature:609644-609661:-1:exon
so has part: feature:608317-608346:-1:exon
so has part: feature:607559-607615:-1:exon
so has part: feature:607023-607055:-1:exon
so has part: feature:606509-606544:-1:exon
so has part: feature:605870-605891:-1:exon
so has part: feature:604985-605045:-1:exon
so has part: feature:604773-604889:-1:exon
so has part: feature:604103-604180:-1:exon
so has part: feature:603138-603248:-1:exon
so has part: feature:602639-602748:-1:exon
so has part: feature:602109-602199:-1:exon
so has part: feature:601609-601649:-1:exon
so has part: feature:600944-600949:-1:exon
so has part: feature:600037-600085:-1:exon

XP_018864568.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:610607-610644:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609778-609788:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:609644-609661:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:608317-608346:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:607559-607615:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:607023-607055:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:606509-606544:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:605870-605891:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:604985-605045:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:604773-604889:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:604103-604180:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:603138-603248:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:602639-602748:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:602109-602199:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:601609-601649:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:600944-600949:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:600037-600085:-1:exon

TNNT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: TNNT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: troponin T, cardiac muscle isoform X1
translation: MSDTEEVTEEYEQEQEEECVEEEEEEWIEEDDGQEEQVEEEEEETKETKAEEQEDETKAAGEGGEGEREQEPGEGESKPKPKVFMPNLVPPKIPDGERLDFDDIHRKRMEKDLNELQALIEAHFESRKKEEEELLSLKDRIEQRRAERAEQQRIRSEREKERQARMAEERARKEEEEARKRAEEEARKKKAFSNMLHFGGYMQKSEKKGGKKQTEREKKKKILSERRKPLNIDHLSEDKLRDKAKELWQNIHDLEAEKFDLQEKFKRQKYEINVLRNRISDHQKVKGSKGARGKTMVGSRRK
SIO_010081: TNNT2
subclass of: SO_0000673
so part of: TNNT2
location: complement(join(600037..600085,600944..600949,601609..601649,602109..602199,602639..602748,603138..603248,604103..604180,604773..604889,604985..605045,605870..605891,606509..606544,607023..607055,607559..607615,608317..608346,609644..609661,609778..609788,610607..610644))
location: region:600037-610644:-1
so has part: feature:610607-610644:-1:exon
so has part: feature:609778-609788:-1:exon
so has part: feature:609644-609661:-1:exon
so has part: feature:608317-608346:-1:exon
so has part: feature:607559-607615:-1:exon
so has part: feature:607023-607055:-1:exon
so has part: feature:606509-606544:-1:exon
so has part: feature:605870-605891:-1:exon
so has part: feature:604985-605045:-1:exon
so has part: feature:604773-604889:-1:exon
so has part: feature:604103-604180:-1:exon
so has part: feature:603138-603248:-1:exon
so has part: feature:602639-602748:-1:exon
so has part: feature:602109-602199:-1:exon
so has part: feature:601609-601649:-1:exon
so has part: feature:600944-600949:-1:exon
so has part: feature:600037-600085:-1:exon

XP_015505862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:610607-610644:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609778-609788:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:609644-609661:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:608317-608346:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:607559-607615:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:607023-607055:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:606509-606544:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:605870-605891:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:604985-605045:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:604773-604889:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:604103-604180:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:603138-603248:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:602639-602748:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:602109-602199:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:601609-601649:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:600944-600949:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:600037-600085:-1:exon

LAD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(614383..627040)
location: region:614383-627040:-1
so has part: feature:614383-627040:-1:exon
subclass of: SO_0000010

107214710
type: Gene
SIO_000068: ncbigene

position:614383:-1
position: 614383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:627040:-1
position: 627040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614383-627040:-1:exon

LAD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LAD1
product: ladinin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_019009034.2
SIO_010081: LAD1
subclass of: SO_0000673
so part of: LAD1
location: complement(join(614383..615428,615727..615804,617270..617359,617653..617784,618341..618413,619117..619166,619875..620015,620402..621104,622976..623116,626624..627040))
location: region:614383-627040:-1
so has part: feature:626624-627040:-1:exon
so has part: feature:622976-623116:-1:exon
so has part: feature:620402-621104:-1:exon
so has part: feature:619875-620015:-1:exon
so has part: feature:619117-619166:-1:exon
so has part: feature:618341-618413:-1:exon
so has part: feature:617653-617784:-1:exon
so has part: feature:617270-617359:-1:exon
so has part: feature:615727-615804:-1:exon
so has part: feature:614383-615428:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:626624-627040:-1:exon

position:626624:-1
position: 626624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:622976-623116:-1:exon

position:622976:-1
position: 622976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623116:-1
position: 623116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:620402-621104:-1:exon

position:620402:-1
position: 620402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621104:-1
position: 621104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:619875-620015:-1:exon

position:619875:-1
position: 619875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620015:-1
position: 620015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:619117-619166:-1:exon

position:619117:-1
position: 619117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619166:-1
position: 619166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:618341-618413:-1:exon

position:618341:-1
position: 618341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618413:-1
position: 618413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:617653-617784:-1:exon

position:617653:-1
position: 617653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617784:-1
position: 617784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:617270-617359:-1:exon

position:617270:-1
position: 617270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617359:-1
position: 617359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:615727-615804:-1:exon

position:615727:-1
position: 615727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615804:-1
position: 615804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:614383-615428:-1:exon

position:615428:-1
position: 615428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LAD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LAD1
product: ladinin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_015650339.3
SIO_010081: LAD1
subclass of: SO_0000673
so part of: LAD1
location: complement(join(614383..615428,615727..615804,617270..617359,617653..617784,618341..618413,619117..619166,619875..620018,620402..621104,622976..623116,626624..627038))
location: region:614383-627038:-1
so has part: feature:626624-627038:-1:exon
so has part: feature:622976-623116:-1:exon
so has part: feature:620402-621104:-1:exon
so has part: feature:619875-620018:-1:exon
so has part: feature:619117-619166:-1:exon
so has part: feature:618341-618413:-1:exon
so has part: feature:617653-617784:-1:exon
so has part: feature:617270-617359:-1:exon
so has part: feature:615727-615804:-1:exon
so has part: feature:614383-615428:-1:exon

position:627038:-1
position: 627038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:626624-627038:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622976-623116:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:620402-621104:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:619875-620018:-1:exon

position:620018:-1
position: 620018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:619117-619166:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:618341-618413:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:617653-617784:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:617270-617359:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:615727-615804:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:614383-615428:-1:exon

LAD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ladinin-1 isoform X2
translation: MSLSRRNWSDLSSLARQRTLEDEEEQQRERRRRHRNLLSSTSMDEEPASPVKDTSPASSRPPSLVKLQSLEDGEEQKLSEVLKTQEGRRTRWLPGVCEKLGQDSEQKEPGVGGGCPEPGAQPRRREESGRAAEQGQEPAKDRGDPAGHKNPEPAKGRGDPAGDKNPEPAKGRGDPAGDKNPEPAKGRGDPAGHKNPEPAKGRGDPAGHKNPEPAKGRGDPAGHKNPEPVSERKGMVRARLQDKEQGVWTPRGEQRKEPPEVGSCQLREVKILTRVGNRSTEEKTSAGTSSPEQQPPRNPSKQVILEFPPRDEPAEKPDPSPTHITFSSSIRRASPRTVSFRIISRKQKEESPSPLTRSASLRIPGSNSTIGEKLEKYNSAVQRSEGVKSSVPVHKSRPLSSEGVASKRNFFEGSAPGKAEAAVVRKDSLKIPGSVTSRINLWISRAQEPAKEENPKEIRRINSLAKRDVWIKQPGDTSGDTKLQ
SIO_010081: LAD1
subclass of: SO_0000673
so part of: LAD1
location: complement(join(615420..615428,615727..615804,617270..617359,617653..617784,618341..618413,619117..619166,619875..620015,620402..621104,622976..623116,626624..626661))
location: region:615420-626661:-1
so has part: feature:626624-626661:-1:exon
so has part: feature:622976-623116:-1:exon
so has part: feature:620402-621104:-1:exon
so has part: feature:619875-620015:-1:exon
so has part: feature:619117-619166:-1:exon
so has part: feature:618341-618413:-1:exon
so has part: feature:617653-617784:-1:exon
so has part: feature:617270-617359:-1:exon
so has part: feature:615727-615804:-1:exon
so has part: feature:615420-615428:-1:exon

XP_018864579.1
type: Protein
SIO_000068: ncbiprotein

position:615420:-1
position: 615420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626661:-1
position: 626661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:626624-626661:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622976-623116:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:620402-621104:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:619875-620015:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:619117-619166:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:618341-618413:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:617653-617784:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:617270-617359:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:615727-615804:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:615420-615428:-1:exon

LAD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ladinin-1 isoform X1
translation: MSLSRRNWSDLSSLARQRTLEDEEEQQRERRRRHRNLLSSTSMDEEPASPVKDTSPASSRPPSLVKLQSLEDGEEQKLSEVLKTQEGRRTRWLPGVCEKLGQDSEQKEPGVGGGCPEPGAQPRRREESGRAAEQGQEPAKDRGDPAGHKNPEPAKGRGDPAGDKNPEPAKGRGDPAGDKNPEPAKGRGDPAGHKNPEPAKGRGDPAGHKNPEPAKGRGDPAGHKNPEPVSERKGMVRARLQDKEQGVWTPRGEQRKEPPEVGSCQLREVKILTRVGNRSTEEKTSAGTSSPEQQQPPRNPSKQVILEFPPRDEPAEKPDPSPTHITFSSSIRRASPRTVSFRIISRKQKEESPSPLTRSASLRIPGSNSTIGEKLEKYNSAVQRSEGVKSSVPVHKSRPLSSEGVASKRNFFEGSAPGKAEAAVVRKDSLKIPGSVTSRINLWISRAQEPAKEENPKEIRRINSLAKRDVWIKQPGDTSGDTKLQ
SIO_010081: LAD1
subclass of: SO_0000673
so part of: LAD1
location: complement(join(615420..615428,615727..615804,617270..617359,617653..617784,618341..618413,619117..619166,619875..620018,620402..621104,622976..623116,626624..626661))
location: region:615420-626661:-1
so has part: feature:626624-626661:-1:exon
so has part: feature:622976-623116:-1:exon
so has part: feature:620402-621104:-1:exon
so has part: feature:619875-620018:-1:exon
so has part: feature:619117-619166:-1:exon
so has part: feature:618341-618413:-1:exon
so has part: feature:617653-617784:-1:exon
so has part: feature:617270-617359:-1:exon
so has part: feature:615727-615804:-1:exon
so has part: feature:615420-615428:-1:exon

XP_015505825.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:626624-626661:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622976-623116:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:620402-621104:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:619875-620018:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:619117-619166:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:618341-618413:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:617653-617784:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:617270-617359:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:615727-615804:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:615420-615428:-1:exon

TNNI1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: TNNI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(636777..644591)
location: region:636777-644591:-1
so has part: feature:636777-644591:-1:exon
subclass of: SO_0000010

107214814
type: Gene
SIO_000068: ncbigene

position:636777:-1
position: 636777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644591:-1
position: 644591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:636777-644591:-1:exon

TNNI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: TNNI1
product: troponin I1, slow skeletal type, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_019008972.1
SIO_010081: TNNI1
subclass of: SO_0000673
so part of: TNNI1
location: complement(join(636777..637107,637416..637526,638810..638986,639428..639517,639603..639734,641193..641234,641948..641979,644411..644591))
location: region:636777-644591:-1
so has part: feature:644411-644591:-1:exon
so has part: feature:641948-641979:-1:exon
so has part: feature:641193-641234:-1:exon
so has part: feature:639603-639734:-1:exon
so has part: feature:639428-639517:-1:exon
so has part: feature:638810-638986:-1:exon
so has part: feature:637416-637526:-1:exon
so has part: feature:636777-637107:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:644411-644591:-1:exon

position:644411:-1
position: 644411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:641948-641979:-1:exon

position:641948:-1
position: 641948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641979:-1
position: 641979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:641193-641234:-1:exon

position:641193:-1
position: 641193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641234:-1
position: 641234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:639603-639734:-1:exon

position:639603:-1
position: 639603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:639734:-1
position: 639734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:639428-639517:-1:exon

position:639428:-1
position: 639428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:639517:-1
position: 639517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:638810-638986:-1:exon

position:638810:-1
position: 638810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638986:-1
position: 638986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:637416-637526:-1:exon

position:637416:-1
position: 637416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:637526:-1
position: 637526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:636777-637107:-1:exon

position:637107:-1
position: 637107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TNNI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: TNNI1
product: troponin I1, slow skeletal type, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_019008973.1
SIO_010081: TNNI1
subclass of: SO_0000673
so part of: TNNI1
location: complement(join(636777..637107,637416..637526,638810..638986,639428..639517,639603..639734,641193..641234,641948..641976,644408..644591))
location: region:636777-644591:-1
so has part: feature:644408-644591:-1:exon
so has part: feature:641948-641976:-1:exon
so has part: feature:641193-641234:-1:exon
so has part: feature:639603-639734:-1:exon
so has part: feature:639428-639517:-1:exon
so has part: feature:638810-638986:-1:exon
so has part: feature:637416-637526:-1:exon
so has part: feature:636777-637107:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:644408-644591:-1:exon

position:644408:-1
position: 644408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:641948-641976:-1:exon

position:641976:-1
position: 641976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:641193-641234:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:639603-639734:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:639428-639517:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638810-638986:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637416-637526:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636777-637107:-1:exon

TNNI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: TNNI1
product: troponin I1, slow skeletal type, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_019008971.1
SIO_010081: TNNI1
subclass of: SO_0000673
so part of: TNNI1
location: complement(join(636777..637107,637416..637526,638810..638986,639428..639517,639603..639734,641193..641234,641948..641976,644396..644591))
location: region:636777-644591:-1
so has part: feature:644396-644591:-1:exon
so has part: feature:641948-641976:-1:exon
so has part: feature:641193-641234:-1:exon
so has part: feature:639603-639734:-1:exon
so has part: feature:639428-639517:-1:exon
so has part: feature:638810-638986:-1:exon
so has part: feature:637416-637526:-1:exon
so has part: feature:636777-637107:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:644396-644591:-1:exon

position:644396:-1
position: 644396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:641948-641976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:641193-641234:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:639603-639734:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:639428-639517:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638810-638986:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637416-637526:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636777-637107:-1:exon

TNNI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: TNNI1
product: troponin I1, slow skeletal type, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033519942.1
SIO_010081: TNNI1
subclass of: SO_0000673
so part of: TNNI1
location: complement(join(636777..637107,637416..637526,638810..638986,639428..639517,639603..639734,641193..641234,641332..641335,641948..641976,644409..644463))
location: region:636777-644463:-1
so has part: feature:644409-644463:-1:exon
so has part: feature:641948-641976:-1:exon
so has part: feature:641332-641335:-1:exon
so has part: feature:641193-641234:-1:exon
so has part: feature:639603-639734:-1:exon
so has part: feature:639428-639517:-1:exon
so has part: feature:638810-638986:-1:exon
so has part: feature:637416-637526:-1:exon
so has part: feature:636777-637107:-1:exon

position:644463:-1
position: 644463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:644409-644463:-1:exon

position:644409:-1
position: 644409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:641948-641976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:641332-641335:-1:exon

position:641332:-1
position: 641332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641335:-1
position: 641335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:641193-641234:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:639603-639734:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:639428-639517:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:638810-638986:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637416-637526:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636777-637107:-1:exon

TNNI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: TNNI1
product: troponin I1, slow skeletal type, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_015650515.3
SIO_010081: TNNI1
subclass of: SO_0000673
so part of: TNNI1
location: complement(join(636777..637107,637416..637526,638810..638986,639428..639517,639603..639734,641193..641234,641332..641335,641948..641976,644396..644446))
location: region:636777-644446:-1
so has part: feature:644396-644446:-1:exon
so has part: feature:641948-641976:-1:exon
so has part: feature:641332-641335:-1:exon
so has part: feature:641193-641234:-1:exon
so has part: feature:639603-639734:-1:exon
so has part: feature:639428-639517:-1:exon
so has part: feature:638810-638986:-1:exon
so has part: feature:637416-637526:-1:exon
so has part: feature:636777-637107:-1:exon

position:644446:-1
position: 644446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:644396-644446:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:641948-641976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:641332-641335:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:641193-641234:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:639603-639734:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:639428-639517:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:638810-638986:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637416-637526:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636777-637107:-1:exon

TNNI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: TNNI1
product: troponin I1, slow skeletal type, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033519944.1
SIO_010081: TNNI1
subclass of: SO_0000673
so part of: TNNI1
location: complement(join(636777..637107,637416..637526,638810..638986,639428..639517,639603..639734,641193..641234,641332..641335,641948..641976,644421..644439))
location: region:636777-644439:-1
so has part: feature:644421-644439:-1:exon
so has part: feature:641948-641976:-1:exon
so has part: feature:641332-641335:-1:exon
so has part: feature:641193-641234:-1:exon
so has part: feature:639603-639734:-1:exon
so has part: feature:639428-639517:-1:exon
so has part: feature:638810-638986:-1:exon
so has part: feature:637416-637526:-1:exon
so has part: feature:636777-637107:-1:exon

position:644439:-1
position: 644439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:644421-644439:-1:exon

position:644421:-1
position: 644421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:641948-641976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:641332-641335:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:641193-641234:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:639603-639734:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:639428-639517:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:638810-638986:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637416-637526:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636777-637107:-1:exon

TNNI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: TNNI1
product: troponin I1, slow skeletal type, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033519943.1
SIO_010081: TNNI1
subclass of: SO_0000673
so part of: TNNI1
location: complement(join(636777..637107,637416..637526,638810..638986,639428..639517,639603..639734,641193..641234,641332..641335,641948..641976,644415..644436))
location: region:636777-644436:-1
so has part: feature:644415-644436:-1:exon
so has part: feature:641948-641976:-1:exon
so has part: feature:641332-641335:-1:exon
so has part: feature:641193-641234:-1:exon
so has part: feature:639603-639734:-1:exon
so has part: feature:639428-639517:-1:exon
so has part: feature:638810-638986:-1:exon
so has part: feature:637416-637526:-1:exon
so has part: feature:636777-637107:-1:exon

position:644436:-1
position: 644436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:644415-644436:-1:exon

position:644415:-1
position: 644415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:641948-641976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:641332-641335:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:641193-641234:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:639603-639734:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:639428-639517:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:638810-638986:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637416-637526:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636777-637107:-1:exon

TNNI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: TNNI1
product: troponin I1, slow skeletal type, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_019008974.1
SIO_010081: TNNI1
subclass of: SO_0000673
so part of: TNNI1
location: complement(join(636777..637107,637416..637526,638810..638986,639428..639517,639603..639734,641193..641234,641332..641335,641948..641979,644411..644426))
location: region:636777-644426:-1
so has part: feature:644411-644426:-1:exon
so has part: feature:641948-641979:-1:exon
so has part: feature:641332-641335:-1:exon
so has part: feature:641193-641234:-1:exon
so has part: feature:639603-639734:-1:exon
so has part: feature:639428-639517:-1:exon
so has part: feature:638810-638986:-1:exon
so has part: feature:637416-637526:-1:exon
so has part: feature:636777-637107:-1:exon

position:644426:-1
position: 644426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:644411-644426:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:641948-641979:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:641332-641335:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:641193-641234:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:639603-639734:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:639428-639517:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:638810-638986:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637416-637526:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636777-637107:-1:exon

TNNI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: TNNI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: troponin I, slow skeletal muscle isoform X3
translation: MPAEEGICAIFTDHLQAGLGFNTPLRHSPGRARLSQGQASPPSCTATATATATGNSARRDARARKSKITASRKLLLKSLMLAKAKEEWDQEIVEKQAEKERYLSERVTPLHTSGLSLSQLQDLCRELHEKVEIVDEERYDIEAKCNHNTREIKDLKIKVLDLRGKFKRPPLRRVRVSADAMLRALLGSKHKVSMDLRANLKSVKKEDTEKERPVEVGDWRKNVEAMSGMEGRKKMFDAAKSPTGQ
SIO_010081: TNNI1
subclass of: SO_0000673
so part of: TNNI1
location: complement(join(637419..637526,638810..638986,639428..639517,639603..639734,641193..641234,641948..641979,644411..644567))
location: region:637419-644567:-1
so has part: feature:644411-644567:-1:exon
so has part: feature:641948-641979:-1:exon
so has part: feature:641193-641234:-1:exon
so has part: feature:639603-639734:-1:exon
so has part: feature:639428-639517:-1:exon
so has part: feature:638810-638986:-1:exon
so has part: feature:637419-637526:-1:exon

XP_018864517.1
type: Protein
SIO_000068: ncbiprotein

position:637419:-1
position: 637419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644567:-1
position: 644567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:644411-644567:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:641948-641979:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:641193-641234:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:639603-639734:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:639428-639517:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638810-638986:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637419-637526:-1:exon

TNNI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: TNNI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: troponin I, slow skeletal muscle isoform X4
translation: MPAEEGICAIFTDHLQAGLGFNTPLRHSPGRARLSQGQASPPSCTATATATATGNSARRDARARKSKITASRKLLLKSLMLAKAKEEWDQEIVEKQAEKERYLSERVTPLHTSGLSLSQLQDLCRELHEKVEIVDEERYDIEAKCNHNTREIKDLKIKVLDLRGKFKRPPLRRVRVSADAMLRALLGSKHKVSMDLRANLKSVKKEDTEKERPVEVGDWRKNVEAMSGMEGRKKMFDAAKSPTGQ
SIO_010081: TNNI1
subclass of: SO_0000673
so part of: TNNI1
location: complement(join(637419..637526,638810..638986,639428..639517,639603..639734,641193..641234,641948..641976,644408..644567))
location: region:637419-644567:-1
so has part: feature:644408-644567:-1:exon
so has part: feature:641948-641976:-1:exon
so has part: feature:641193-641234:-1:exon
so has part: feature:639603-639734:-1:exon
so has part: feature:639428-639517:-1:exon
so has part: feature:638810-638986:-1:exon
so has part: feature:637419-637526:-1:exon

XP_018864518.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:644408-644567:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:641948-641976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:641193-641234:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:639603-639734:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:639428-639517:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638810-638986:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637419-637526:-1:exon

TNNI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: TNNI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: troponin I, slow skeletal muscle isoform X1
translation: MPAEEGICAIFTDHLQAGLGFNTPLRHSPGRARLSQGQASPPSCTATATATATATATGNSARRDARARKSKITASRKLLLKSLMLAKAKEEWDQEIVEKQAEKERYLSERVTPLHTSGLSLSQLQDLCRELHEKVEIVDEERYDIEAKCNHNTREIKDLKIKVLDLRGKFKRPPLRRVRVSADAMLRALLGSKHKVSMDLRANLKSVKKEDTEKERPVEVGDWRKNVEAMSGMEGRKKMFDAAKSPTGQ
SIO_010081: TNNI1
subclass of: SO_0000673
so part of: TNNI1
location: complement(join(637419..637526,638810..638986,639428..639517,639603..639734,641193..641234,641948..641976,644396..644567))
location: region:637419-644567:-1
so has part: feature:644396-644567:-1:exon
so has part: feature:641948-641976:-1:exon
so has part: feature:641193-641234:-1:exon
so has part: feature:639603-639734:-1:exon
so has part: feature:639428-639517:-1:exon
so has part: feature:638810-638986:-1:exon
so has part: feature:637419-637526:-1:exon

XP_018864516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:644396-644567:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:641948-641976:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:641193-641234:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:639603-639734:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:639428-639517:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638810-638986:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637419-637526:-1:exon

TNNI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: TNNI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: troponin I, slow skeletal muscle isoform X2
translation: MPEPERKSKITASRKLLLKSLMLAKAKEEWDQEIVEKQAEKERYLSERVTPLHTSGLSLSQLQDLCRELHEKVEIVDEERYDIEAKCNHNTREIKDLKIKVLDLRGKFKRPPLRRVRVSADAMLRALLGSKHKVSMDLRANLKSVKKEDTEKERPVEVGDWRKNVEAMSGMEGRKKMFDAAKSPTGQ
SIO_010081: TNNI1
subclass of: SO_0000673
so part of: TNNI1
location: complement(join(637419..637526,638810..638986,639428..639517,639603..639734,641193..641234,641332..641335,641948..641958))
location: region:637419-641958:-1
so has part: feature:641948-641958:-1:exon
so has part: feature:641332-641335:-1:exon
so has part: feature:641193-641234:-1:exon
so has part: feature:639603-639734:-1:exon
so has part: feature:639428-639517:-1:exon
so has part: feature:638810-638986:-1:exon
so has part: feature:637419-637526:-1:exon

XP_018864519.1
type: Protein
SIO_000068: ncbiprotein

position:641958:-1
position: 641958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641948-641958:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:641332-641335:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:641193-641234:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:639603-639734:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:639428-639517:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638810-638986:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637419-637526:-1:exon

TNNI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: TNNI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: troponin I, slow skeletal muscle isoform X2
translation: MPEPERKSKITASRKLLLKSLMLAKAKEEWDQEIVEKQAEKERYLSERVTPLHTSGLSLSQLQDLCRELHEKVEIVDEERYDIEAKCNHNTREIKDLKIKVLDLRGKFKRPPLRRVRVSADAMLRALLGSKHKVSMDLRANLKSVKKEDTEKERPVEVGDWRKNVEAMSGMEGRKKMFDAAKSPTGQ
SIO_010081: TNNI1
subclass of: SO_0000673
so part of: TNNI1
location: complement(join(637419..637526,638810..638986,639428..639517,639603..639734,641193..641234,641332..641335,641948..641958))
location: region:637419-641958:-1
so has part: feature:641948-641958:-1:exon
so has part: feature:641332-641335:-1:exon
so has part: feature:641193-641234:-1:exon
so has part: feature:639603-639734:-1:exon
so has part: feature:639428-639517:-1:exon
so has part: feature:638810-638986:-1:exon
so has part: feature:637419-637526:-1:exon

XP_033375833.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:641948-641958:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:641332-641335:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:641193-641234:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:639603-639734:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:639428-639517:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638810-638986:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637419-637526:-1:exon

TNNI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: TNNI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: troponin I, slow skeletal muscle isoform X2
translation: MPEPERKSKITASRKLLLKSLMLAKAKEEWDQEIVEKQAEKERYLSERVTPLHTSGLSLSQLQDLCRELHEKVEIVDEERYDIEAKCNHNTREIKDLKIKVLDLRGKFKRPPLRRVRVSADAMLRALLGSKHKVSMDLRANLKSVKKEDTEKERPVEVGDWRKNVEAMSGMEGRKKMFDAAKSPTGQ
SIO_010081: TNNI1
subclass of: SO_0000673
so part of: TNNI1
location: complement(join(637419..637526,638810..638986,639428..639517,639603..639734,641193..641234,641332..641335,641948..641958))
location: region:637419-641958:-1
so has part: feature:641948-641958:-1:exon
so has part: feature:641332-641335:-1:exon
so has part: feature:641193-641234:-1:exon
so has part: feature:639603-639734:-1:exon
so has part: feature:639428-639517:-1:exon
so has part: feature:638810-638986:-1:exon
so has part: feature:637419-637526:-1:exon

XP_033375834.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:641948-641958:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:641332-641335:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:641193-641234:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:639603-639734:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:639428-639517:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638810-638986:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637419-637526:-1:exon

TNNI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: TNNI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: troponin I, slow skeletal muscle isoform X2
translation: MPEPERKSKITASRKLLLKSLMLAKAKEEWDQEIVEKQAEKERYLSERVTPLHTSGLSLSQLQDLCRELHEKVEIVDEERYDIEAKCNHNTREIKDLKIKVLDLRGKFKRPPLRRVRVSADAMLRALLGSKHKVSMDLRANLKSVKKEDTEKERPVEVGDWRKNVEAMSGMEGRKKMFDAAKSPTGQ
SIO_010081: TNNI1
subclass of: SO_0000673
so part of: TNNI1
location: complement(join(637419..637526,638810..638986,639428..639517,639603..639734,641193..641234,641332..641335,641948..641958))
location: region:637419-641958:-1
so has part: feature:641948-641958:-1:exon
so has part: feature:641332-641335:-1:exon
so has part: feature:641193-641234:-1:exon
so has part: feature:639603-639734:-1:exon
so has part: feature:639428-639517:-1:exon
so has part: feature:638810-638986:-1:exon
so has part: feature:637419-637526:-1:exon

XP_033375835.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:641948-641958:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:641332-641335:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:641193-641234:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:639603-639734:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:639428-639517:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638810-638986:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637419-637526:-1:exon

TNNI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: TNNI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: troponin I, slow skeletal muscle isoform X2
translation: MPEPERKSKITASRKLLLKSLMLAKAKEEWDQEIVEKQAEKERYLSERVTPLHTSGLSLSQLQDLCRELHEKVEIVDEERYDIEAKCNHNTREIKDLKIKVLDLRGKFKRPPLRRVRVSADAMLRALLGSKHKVSMDLRANLKSVKKEDTEKERPVEVGDWRKNVEAMSGMEGRKKMFDAAKSPTGQ
SIO_010081: TNNI1
subclass of: SO_0000673
so part of: TNNI1
location: complement(join(637419..637526,638810..638986,639428..639517,639603..639734,641193..641234,641332..641335,641948..641958))
location: region:637419-641958:-1
so has part: feature:641948-641958:-1:exon
so has part: feature:641332-641335:-1:exon
so has part: feature:641193-641234:-1:exon
so has part: feature:639603-639734:-1:exon
so has part: feature:639428-639517:-1:exon
so has part: feature:638810-638986:-1:exon
so has part: feature:637419-637526:-1:exon

XP_015506001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:641948-641958:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:641332-641335:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:641193-641234:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:639603-639734:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:639428-639517:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638810-638986:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637419-637526:-1:exon

PHLDA3
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: PHLDA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(651070..653144)
location: region:651070-653144:-1
so has part: feature:651070-653144:-1:exon
subclass of: SO_0000010

107214816
type: Gene
SIO_000068: ncbigene

position:651070:-1
position: 651070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:653144:-1
position: 653144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:651070-653144:-1:exon

PHLDA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PHLDA3
product: pleckstrin homology like domain family A member 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033519949.1
SIO_010081: PHLDA3
subclass of: SO_0000673
so part of: PHLDA3
location: complement(join(651070..651918,652311..653143))
location: region:651070-653143:-1
so has part: feature:652311-653143:-1:exon
so has part: feature:651070-651918:-1:exon

position:653143:-1
position: 653143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:652311-653143:-1:exon

position:652311:-1
position: 652311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:651070-651918:-1:exon

position:651918:-1
position: 651918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PHLDA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PHLDA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology-like domain family A member 3 isoform X1
translation: MTPEKVLREGVLEKRSGGLLQLWKKKRCLLTEKGLQLFEPKGSRRKELSFARMKAVECVEWKERHIYFTVVMDDSLEIDFRCAQEDPGWNAEITMGLVRFKNQQAMQEWCSWTQPRGDSPGNRSFPGVGWRWPSARQVLGRTGSLRANEVTAVQPGDQDRPALALALPVPGQDRGTAGAGLAQPPPLAQQGTQAEPAPGASDEAEGDIPAWAPTTLHSVDMCRTSVHWWGPQASPAGQGMDEAVPEGSVPQGVLPERQ
SIO_010081: PHLDA3
subclass of: SO_0000673
so part of: PHLDA3
location: complement(join(651466..651918,652311..652634))
location: region:651466-652634:-1
so has part: feature:652311-652634:-1:exon
so has part: feature:651466-651918:-1:exon

XP_033375840.1
type: Protein
SIO_000068: ncbiprotein

position:651466:-1
position: 651466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:652634:-1
position: 652634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:652311-652634:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:651466-651918:-1:exon

PHLDA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PHLDA3
product: pleckstrin homology like domain family A member 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_015650520.3
SIO_010081: PHLDA3
subclass of: SO_0000673
so part of: PHLDA3
location: complement(join(651709..651918,652283..653144))
location: region:651709-653144:-1
so has part: feature:652283-653144:-1:exon
so has part: feature:651709-651918:-1:exon

position:651709:-1
position: 651709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:652283-653144:-1:exon

position:652283:-1
position: 652283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:651709-651918:-1:exon

PHLDA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PHLDA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology-like domain family A member 3 isoform X2
translation: MTPEKVLREGVLEKRSGGLLQLWKKKRCLLTEKGLQLFEPKGSRRKELSFARMKAVECVEWKERHIYFTVVMDDSLEIDFRCAQEDPGWNAEITMGLVRFKNQQAMQEVRARHSCRAVVQLDTAPGGQPRESQLPRSRLEMALGSAGAGENGIPAGK
SIO_010081: PHLDA3
subclass of: SO_0000673
so part of: PHLDA3
location: complement(join(651797..651918,652283..652634))
location: region:651797-652634:-1
so has part: feature:652283-652634:-1:exon
so has part: feature:651797-651918:-1:exon

XP_015506006.1
type: Protein
SIO_000068: ncbiprotein

position:651797:-1
position: 651797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:652283-652634:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:651797-651918:-1:exon

CSRP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: CSRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(658201..672092)
location: region:658201-672092:-1
so has part: feature:658201-672092:-1:exon
subclass of: SO_0000010

107215032
type: Gene
SIO_000068: ncbigene

position:658201:-1
position: 658201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:672092:-1
position: 672092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:658201-672092:-1:exon

CSRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: CSRP1
product: cysteine and glycine rich protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_015650962.3
SIO_010081: CSRP1
subclass of: SO_0000673
so part of: CSRP1
location: complement(join(658201..658606,658879..658972,660662..660788,661139..661307,665441..665553,671950..672092))
location: region:658201-672092:-1
so has part: feature:671950-672092:-1:exon
so has part: feature:665441-665553:-1:exon
so has part: feature:661139-661307:-1:exon
so has part: feature:660662-660788:-1:exon
so has part: feature:658879-658972:-1:exon
so has part: feature:658201-658606:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:671950-672092:-1:exon

position:671950:-1
position: 671950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:665441-665553:-1:exon

position:665441:-1
position: 665441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665553:-1
position: 665553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:661139-661307:-1:exon

position:661139:-1
position: 661139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661307:-1
position: 661307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:660662-660788:-1:exon

position:660662:-1
position: 660662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660788:-1
position: 660788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:658879-658972:-1:exon

position:658879:-1
position: 658879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658972:-1
position: 658972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:658201-658606:-1:exon

position:658606:-1
position: 658606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CSRP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: CSRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine and glycine-rich protein 1
translation: MPNWGGGKKCGVCQKAVYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVAVHGEEIYCKSCYGKKYGPKGYGYGQGAGTLSTDKGESLGIKYEESHPHRPPNPNAARMAQMVGGADGCPRCGQAVYAAEKVIGAGKSWHKSCFRCAKCGKSLESTTLADKDGEIYCKGCYAKNFGPKGFGFGQGAGALIHSQ
SIO_010081: CSRP1
subclass of: SO_0000673
so part of: CSRP1
location: complement(join(658530..658606,658879..658972,660662..660788,661139..661307,665441..665552))
location: region:658530-665552:-1
so has part: feature:665441-665552:-1:exon
so has part: feature:661139-661307:-1:exon
so has part: feature:660662-660788:-1:exon
so has part: feature:658879-658972:-1:exon
so has part: feature:658530-658606:-1:exon

XP_015506448.1
type: Protein
SIO_000068: ncbiprotein

position:658530:-1
position: 658530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665552:-1
position: 665552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:665441-665552:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:661139-661307:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:660662-660788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:658879-658972:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:658530-658606:-1:exon

LOC107214882
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107214882
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 673912..770813
location: region:673912-770813:1
so has part: feature:673912-770813:1:exon
subclass of: SO_0000010

107214882
type: Gene
SIO_000068: ncbigene

position:673912:1
position: 673912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:770813:1
position: 770813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:673912-770813:1:exon

LOC107214882
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107214882
product: protein phosphatase 1 regulatory subunit 12B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033519838.1
SIO_010081: LOC107214882
subclass of: SO_0000673
so part of: LOC107214882
location: join(673912..673938,680423..680611,711341..711471,712906..713024,716275..716434,720405..720549,722819..722893,725561..725640,726185..726324,730553..730662,733746..733943,734699..734781,736908..737030,742293..742478,742988..743173,756509..756599,757554..757676,758338..758521,759052..759164,760411..760455,770090..770813)
location: region:673912-770813:1
so has part: feature:673912-673938:1:exon
so has part: feature:680423-680611:1:exon
so has part: feature:711341-711471:1:exon
so has part: feature:712906-713024:1:exon
so has part: feature:716275-716434:1:exon
so has part: feature:720405-720549:1:exon
so has part: feature:722819-722893:1:exon
so has part: feature:725561-725640:1:exon
so has part: feature:726185-726324:1:exon
so has part: feature:730553-730662:1:exon
so has part: feature:733746-733943:1:exon
so has part: feature:734699-734781:1:exon
so has part: feature:736908-737030:1:exon
so has part: feature:742293-742478:1:exon
so has part: feature:742988-743173:1:exon
so has part: feature:756509-756599:1:exon
so has part: feature:757554-757676:1:exon
so has part: feature:758338-758521:1:exon
so has part: feature:759052-759164:1:exon
so has part: feature:760411-760455:1:exon
so has part: feature:770090-770813:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:673912-673938:1:exon

position:673938:1
position: 673938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:680423-680611:1:exon

position:680423:1
position: 680423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:680611:1
position: 680611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:711341-711471:1:exon

position:711341:1
position: 711341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:711471:1
position: 711471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:712906-713024:1:exon

position:712906:1
position: 712906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:713024:1
position: 713024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:716275-716434:1:exon

position:716275:1
position: 716275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:716434:1
position: 716434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:720405-720549:1:exon

position:720405:1
position: 720405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720549:1
position: 720549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:722819-722893:1:exon

position:722819:1
position: 722819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722893:1
position: 722893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:725561-725640:1:exon

position:725561:1
position: 725561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725640:1
position: 725640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:726185-726324:1:exon

position:726185:1
position: 726185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:726324:1
position: 726324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:730553-730662:1:exon

position:730553:1
position: 730553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730662:1
position: 730662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:733746-733943:1:exon

position:733746:1
position: 733746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:733943:1
position: 733943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:734699-734781:1:exon

position:734699:1
position: 734699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:734781:1
position: 734781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:736908-737030:1:exon

position:736908:1
position: 736908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:737030:1
position: 737030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:742293-742478:1:exon

position:742293:1
position: 742293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:742478:1
position: 742478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:742988-743173:1:exon

position:742988:1
position: 742988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:743173:1
position: 743173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:756509-756599:1:exon

position:756509:1
position: 756509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:756599:1
position: 756599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:757554-757676:1:exon

position:757554:1
position: 757554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757676:1
position: 757676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:758338-758521:1:exon

position:758338:1
position: 758338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758521:1
position: 758521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:759052-759164:1:exon

position:759052:1
position: 759052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759164:1
position: 759164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:760411-760455:1:exon

position:760411:1
position: 760411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:760455:1
position: 760455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:770090-770813:1:exon

position:770090:1
position: 770090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107214882
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107214882
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1 regulatory subunit 12B
translation: MRVCQPLQQEPVAAGGGRGRHRGAGGSRVRFEEGAVFLAACSSGDTEEVKRLLGRGARINTTNVDGLTALHQACIDENLDMVKFLVENGANVNQQDNEGWTPLHAVASCGYLNIAEFLISHGANVAAVNSEGEVPSDIAEEAAMKDLLLEQVKKQGVDLELSRKEEEQQMLQDARQWLNSGKIEDVKQPRTGATALHVAAAKGYSEVMRLLIQAGFNLNVQDNDGWTPLHAAAHWGVKEACSILAEALCDMDIRNKLGQTPFDVADEGLVEHLEMLQKKQTVLRSEKETRNKLIEADMNGKPQNRFFTNKEKILYEEDTMKSVETEEENKDSSSSSSEEEEAEDEVSESDAEKESERKEEPFANHSSRESRPSITEQMAPAEPNSFTASARRFSWLSKSDEQKDESPSSWRLGLRKTGSHNMLSEVAATREAQRDKTSSIYRSSSSPRISALLDNKEKDRDNKSYLATIVPRRLSSTSDIEEKENRESAVNLVRSGSYSRQPWRDEPKGNEAPHSAPTTYVSTYLKSASFGRSSDLSSPYISASCSPSLATSPTAIGSSTSLGTPWPAVPCCPPSLGVSTPASACHNTRAPFRQQTDSAVEKSTEGSCGSTPLGVITNRAVLGAANGTGNAGAASALGKELSAEEPRERRRSYLTPVRDEEAESLRKARSRQARQTRRSTQGVTLTELQEAERTFSRSRAERQAQHSDTAQDSGWGRSTEDETVYRRLRGPAQPDKPTTPVSPSTAAPLLYTTSYLTRTNKYLGLDSVNPADFRAAATEMEKNECEDQDSDDRSLNKQSIRERRRPKERRRGTGIIFSAQDDDDEVDGNEEVKETRC
SIO_010081: LOC107214882
subclass of: SO_0000673
so part of: LOC107214882
location: join(673912..673938,680423..680611,711341..711471,712906..713024,716275..716434,720405..720549,722819..722893,725561..725640,726185..726324,730553..730662,733746..733943,734699..734781,736908..737030,742293..742478,742988..743173,756509..756599,757554..757676,758338..758521,759052..759164,760411..760455,770090..770095)
location: region:673912-770095:1
so has part: feature:673912-673938:1:exon
so has part: feature:680423-680611:1:exon
so has part: feature:711341-711471:1:exon
so has part: feature:712906-713024:1:exon
so has part: feature:716275-716434:1:exon
so has part: feature:720405-720549:1:exon
so has part: feature:722819-722893:1:exon
so has part: feature:725561-725640:1:exon
so has part: feature:726185-726324:1:exon
so has part: feature:730553-730662:1:exon
so has part: feature:733746-733943:1:exon
so has part: feature:734699-734781:1:exon
so has part: feature:736908-737030:1:exon
so has part: feature:742293-742478:1:exon
so has part: feature:742988-743173:1:exon
so has part: feature:756509-756599:1:exon
so has part: feature:757554-757676:1:exon
so has part: feature:758338-758521:1:exon
so has part: feature:759052-759164:1:exon
so has part: feature:760411-760455:1:exon
so has part: feature:770090-770095:1:exon

XP_033375729.1
type: Protein
SIO_000068: ncbiprotein

position:770095:1
position: 770095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:673912-673938:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:680423-680611:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:711341-711471:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:712906-713024:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:716275-716434:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:720405-720549:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:722819-722893:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:725561-725640:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:726185-726324:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:730553-730662:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:733746-733943:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:734699-734781:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:736908-737030:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:742293-742478:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:742988-743173:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:756509-756599:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:757554-757676:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:758338-758521:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:759052-759164:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:760411-760455:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:770090-770095:1:exon

LOC117243656
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC117243656
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 776158..807401
location: region:776158-807401:1
so has part: feature:776158-807401:1:exon
subclass of: SO_0000010

117243656
type: Gene
SIO_000068: ncbigene

position:776158:1
position: 776158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807401:1
position: 807401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:776158-807401:1:exon

LOC117243656
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC117243656
product: protein phosphatase 1 regulatory subunit 12B-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_033519951.1
SIO_010081: LOC117243656
subclass of: SO_0000673
so part of: LOC117243656
location: join(776158..776358,790662..790678,791121..791268,791870..791974,792239..792289,793640..793690,804283..807401)
location: region:776158-807401:1
so has part: feature:776158-776358:1:exon
so has part: feature:790662-790678:1:exon
so has part: feature:791121-791268:1:exon
so has part: feature:791870-791974:1:exon
so has part: feature:792239-792289:1:exon
so has part: feature:793640-793690:1:exon
so has part: feature:804283-807401:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:776158-776358:1:exon

position:776358:1
position: 776358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:790662-790678:1:exon

position:790662:1
position: 790662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:790678:1
position: 790678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:791121-791268:1:exon

position:791121:1
position: 791121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:791268:1
position: 791268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:791870-791974:1:exon

position:791870:1
position: 791870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:791974:1
position: 791974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:792239-792289:1:exon

position:792239:1
position: 792239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:792289:1
position: 792289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:793640-793690:1:exon

position:793640:1
position: 793640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793690:1
position: 793690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:804283-807401:1:exon

position:804283:1
position: 804283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117243656
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC117243656
product: protein phosphatase 1 regulatory subunit 12B-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033519950.1
SIO_010081: LOC117243656
subclass of: SO_0000673
so part of: LOC117243656
location: join(776158..776358,790662..790678,791121..791268,791870..791974,792236..792289,793640..793690,800148..800327,804283..804389)
location: region:776158-804389:1
so has part: feature:776158-776358:1:exon
so has part: feature:790662-790678:1:exon
so has part: feature:791121-791268:1:exon
so has part: feature:791870-791974:1:exon
so has part: feature:792236-792289:1:exon
so has part: feature:793640-793690:1:exon
so has part: feature:800148-800327:1:exon
so has part: feature:804283-804389:1:exon

position:804389:1
position: 804389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:776158-776358:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:790662-790678:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:791121-791268:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:791870-791974:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:792236-792289:1:exon

position:792236:1
position: 792236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:793640-793690:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:800148-800327:1:exon

position:800148:1
position: 800148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:800327:1
position: 800327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:804283-804389:1:exon

LOC117243656
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC117243656
product: protein phosphatase 1 regulatory subunit 12B-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_015650656.3
SIO_010081: LOC117243656
subclass of: SO_0000673
so part of: LOC117243656
location: join(776160..776358,790662..790678,791121..791268,791870..791974,792236..792289,793640..793690,804283..807401)
location: region:776160-807401:1
so has part: feature:776160-776358:1:exon
so has part: feature:790662-790678:1:exon
so has part: feature:791121-791268:1:exon
so has part: feature:791870-791974:1:exon
so has part: feature:792236-792289:1:exon
so has part: feature:793640-793690:1:exon
so has part: feature:804283-807401:1:exon

position:776160:1
position: 776160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:776160-776358:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:790662-790678:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:791121-791268:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:791870-791974:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:792236-792289:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:793640-793690:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:804283-807401:1:exon

LOC117243656
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC117243656
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1 regulatory subunit 12B-like isoform X2
translation: MSSLYTRSKEYTRSRKAQSDSPPSSPSPIAKTLRHERLSRLEAAPNPSTSESSYSDRASARSSAYSRRESRLAALSSRADDESNRDYKKLYESALSENQKLKSKLQEAQLELADIKAKLEKATQQKQEKTSDRSSMLEMEKREKRALERKLSEMEEEMKILTELKSDNQRLKDENGALIRVISKLSK
SIO_010081: LOC117243656
subclass of: SO_0000673
so part of: LOC117243656
location: join(776257..776358,790662..790678,791121..791268,791870..791974,792236..792289,793640..793690,804283..804369)
location: region:776257-804369:1
so has part: feature:776257-776358:1:exon
so has part: feature:790662-790678:1:exon
so has part: feature:791121-791268:1:exon
so has part: feature:791870-791974:1:exon
so has part: feature:792236-792289:1:exon
so has part: feature:793640-793690:1:exon
so has part: feature:804283-804369:1:exon

XP_015506142.1
type: Protein
SIO_000068: ncbiprotein

position:776257:1
position: 776257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:804369:1
position: 804369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:776257-776358:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:790662-790678:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:791121-791268:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:791870-791974:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:792236-792289:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:793640-793690:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:804283-804369:1:exon

LOC117243656
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC117243656
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1 regulatory subunit 12B-like isoform X3
translation: MSSLYTRSKEYTRSRKAQSDSPPSSPSPIAKTLRHERLSRLEAAPNPSTSESSYSDRASARSSAYSRRESRLAALSSRADDESNRDYKKLYESALSENQKLKSKLQEAQLELADIKAKLEKATQKQEKTSDRSSMLEMEKREKRALERKLSEMEEEMKILTELKSDNQRLKDENGALIRVISKLSK
SIO_010081: LOC117243656
subclass of: SO_0000673
so part of: LOC117243656
location: join(776257..776358,790662..790678,791121..791268,791870..791974,792239..792289,793640..793690,804283..804369)
location: region:776257-804369:1
so has part: feature:776257-776358:1:exon
so has part: feature:790662-790678:1:exon
so has part: feature:791121-791268:1:exon
so has part: feature:791870-791974:1:exon
so has part: feature:792239-792289:1:exon
so has part: feature:793640-793690:1:exon
so has part: feature:804283-804369:1:exon

XP_033375842.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:776257-776358:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:790662-790678:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:791121-791268:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:791870-791974:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:792239-792289:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:793640-793690:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:804283-804369:1:exon

LOC117243656
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC117243656
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1 regulatory subunit 12B-like isoform X1
translation: MSSLYTRSKEYTRSRKAQSDSPPSSPSPIAKTLRHERLSRLEAAPNPSTSESSYSDRASARSSAYSRRESRLAALSSRADDESNRDYKKLYESALSENQKLKSKLQEAQLELADIKAKLEKATQQKQEKTSDRSSMLEMEKREKRALERKLSEMEEEMKNLHQLKQIHTLRQMNEQLLAENRALTRVVARLSLPAKPSESEEL
SIO_010081: LOC117243656
subclass of: SO_0000673
so part of: LOC117243656
location: join(776257..776358,790662..790678,791121..791268,791870..791974,792236..792289,793640..793690,800148..800282)
location: region:776257-800282:1
so has part: feature:776257-776358:1:exon
so has part: feature:790662-790678:1:exon
so has part: feature:791121-791268:1:exon
so has part: feature:791870-791974:1:exon
so has part: feature:792236-792289:1:exon
so has part: feature:793640-793690:1:exon
so has part: feature:800148-800282:1:exon

XP_033375841.1
type: Protein
SIO_000068: ncbiprotein

position:800282:1
position: 800282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:776257-776358:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:790662-790678:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:791121-791268:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:791870-791974:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:792236-792289:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:793640-793690:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:800148-800282:1:exon

SYT2
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: SYT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(813210..833872)
location: region:813210-833872:-1
so has part: feature:813210-833872:-1:exon
subclass of: SO_0000010

107214735
type: Gene
SIO_000068: ncbigene

position:813210:-1
position: 813210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:833872:-1
position: 833872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:813210-833872:-1:exon

SYT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: SYT2
product: synaptotagmin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_015650382.3
SIO_010081: SYT2
subclass of: SO_0000673
so part of: SYT2
location: complement(join(813210..813601,814229..814362,815554..815671,816048..816215,816371..816538,816742..816858,818149..818318,818456..818638,833672..833872))
location: region:813210-833872:-1
so has part: feature:833672-833872:-1:exon
so has part: feature:818456-818638:-1:exon
so has part: feature:818149-818318:-1:exon
so has part: feature:816742-816858:-1:exon
so has part: feature:816371-816538:-1:exon
so has part: feature:816048-816215:-1:exon
so has part: feature:815554-815671:-1:exon
so has part: feature:814229-814362:-1:exon
so has part: feature:813210-813601:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:833672-833872:-1:exon

position:833672:-1
position: 833672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:818456-818638:-1:exon

position:818456:-1
position: 818456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818638:-1
position: 818638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:818149-818318:-1:exon

position:818149:-1
position: 818149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818318:-1
position: 818318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:816742-816858:-1:exon

position:816742:-1
position: 816742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816858:-1
position: 816858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:816371-816538:-1:exon

position:816371:-1
position: 816371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816538:-1
position: 816538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:816048-816215:-1:exon

position:816048:-1
position: 816048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816215:-1
position: 816215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:815554-815671:-1:exon

position:815554:-1
position: 815554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:815671:-1
position: 815671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:814229-814362:-1:exon

position:814229:-1
position: 814229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:814362:-1
position: 814362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:813210-813601:-1:exon

position:813601:-1
position: 813601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SYT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: SYT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-2
translation: MTFKQASMMAPEATASTLPMSTMENSTEAAGPGESKEDMFTKLRDKFMNELNKIPLPPWALIAIAVVAGLLILTCCFCICKKCCCKKKKNKKEKGKGMKNAMNMKDMKSGNQDDDDAETGLTEGEGEEEEKEPENLGKLQFSLDYDFQANQLTVGILQAAELPALDMGGTSDPYVKVFLLPDKKKKYETKVQKKTLNPAFNETFTFKVPYQELGGKTLVMAIYDFDRFSKHDIIGEVKVPMNTVDLGQPIEEWRDLQSGEKEEPEKLGDICISLRYVPTAGKLTVCILEAKNLKKMDVGGLSDPYVKIHLLQNGKRLKKKKTTVKKKTLNPYFNESFSFEIPFEQIQKVQVVITVLDYDKLGKNEAIGKIFTGLNSTGTELRHWSDMLANPRRPIAQWHSLKPEEEVDAALGKNK
SIO_010081: SYT2
subclass of: SO_0000673
so part of: SYT2
location: complement(join(813395..813601,814229..814362,815554..815671,816048..816215,816371..816538,816742..816858,818149..818318,818456..818621))
location: region:813395-818621:-1
so has part: feature:818456-818621:-1:exon
so has part: feature:818149-818318:-1:exon
so has part: feature:816742-816858:-1:exon
so has part: feature:816371-816538:-1:exon
so has part: feature:816048-816215:-1:exon
so has part: feature:815554-815671:-1:exon
so has part: feature:814229-814362:-1:exon
so has part: feature:813395-813601:-1:exon

XP_015505868.1
type: Protein
SIO_000068: ncbiprotein

position:813395:-1
position: 813395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818621:-1
position: 818621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:818456-818621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:818149-818318:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:816742-816858:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:816371-816538:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:816048-816215:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:815554-815671:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:814229-814362:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:813395-813601:-1:exon

NAV1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: NAV1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(836463..>893384)
location: region:836463-893384:-1
so has part: feature:836463-893384:-1:exon
subclass of: SO_0000010

107214955
type: Gene
SIO_000068: ncbigene

position:836463:-1
position: 836463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893384:-1
position: 893384
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:836463-893384:-1:exon

NAV1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: NAV1
product: neuron navigator 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033519839.1
SIO_010081: NAV1
subclass of: SO_0000673
so part of: NAV1
location: complement(join(836463..839932,840416..840613,840837..840955,841598..841794,842060..842131,842321..842475,842563..842798,842897..843056,843211..843306,843427..843524,843723..843897,844042..844204,844291..844487,845816..845824,846251..846372,846938..847049,847182..847265,847436..847513,847605..847628,847798..847850,848393..848563,849170..849318,849474..849515,849688..850146,850251..850944,851309..851606,851803..851941,862227..862592,866120..866222,893168..>893384))
location: region:836463-893384:-1
so has part: feature:893168-893384:-1:exon
so has part: feature:866120-866222:-1:exon
so has part: feature:862227-862592:-1:exon
so has part: feature:851803-851941:-1:exon
so has part: feature:851309-851606:-1:exon
so has part: feature:850251-850944:-1:exon
so has part: feature:849688-850146:-1:exon
so has part: feature:849474-849515:-1:exon
so has part: feature:849170-849318:-1:exon
so has part: feature:848393-848563:-1:exon
so has part: feature:847798-847850:-1:exon
so has part: feature:847605-847628:-1:exon
so has part: feature:847436-847513:-1:exon
so has part: feature:847182-847265:-1:exon
so has part: feature:846938-847049:-1:exon
so has part: feature:846251-846372:-1:exon
so has part: feature:845816-845824:-1:exon
so has part: feature:844291-844487:-1:exon
so has part: feature:844042-844204:-1:exon
so has part: feature:843723-843897:-1:exon
so has part: feature:843427-843524:-1:exon
so has part: feature:843211-843306:-1:exon
so has part: feature:842897-843056:-1:exon
so has part: feature:842563-842798:-1:exon
so has part: feature:842321-842475:-1:exon
so has part: feature:842060-842131:-1:exon
so has part: feature:841598-841794:-1:exon
so has part: feature:840837-840955:-1:exon
so has part: feature:840416-840613:-1:exon
so has part: feature:836463-839932:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:893168-893384:-1:exon

position:893168:-1
position: 893168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:866120-866222:-1:exon

position:866120:-1
position: 866120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:866222:-1
position: 866222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:862227-862592:-1:exon

position:862227:-1
position: 862227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:862592:-1
position: 862592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:851803-851941:-1:exon

position:851803:-1
position: 851803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:851941:-1
position: 851941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:851309-851606:-1:exon

position:851309:-1
position: 851309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:851606:-1
position: 851606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:850251-850944:-1:exon

position:850251:-1
position: 850251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850944:-1
position: 850944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:849688-850146:-1:exon

position:849688:-1
position: 849688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850146:-1
position: 850146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:849474-849515:-1:exon

position:849474:-1
position: 849474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:849515:-1
position: 849515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:849170-849318:-1:exon

position:849170:-1
position: 849170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:849318:-1
position: 849318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:848393-848563:-1:exon

position:848393:-1
position: 848393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:848563:-1
position: 848563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:847798-847850:-1:exon

position:847798:-1
position: 847798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:847850:-1
position: 847850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:847605-847628:-1:exon

position:847605:-1
position: 847605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:847628:-1
position: 847628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:847436-847513:-1:exon

position:847436:-1
position: 847436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:847513:-1
position: 847513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:847182-847265:-1:exon

position:847182:-1
position: 847182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:847265:-1
position: 847265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:846938-847049:-1:exon

position:846938:-1
position: 846938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:847049:-1
position: 847049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:846251-846372:-1:exon

position:846251:-1
position: 846251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846372:-1
position: 846372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:845816-845824:-1:exon

position:845816:-1
position: 845816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845824:-1
position: 845824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:844291-844487:-1:exon

position:844291:-1
position: 844291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844487:-1
position: 844487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:844042-844204:-1:exon

position:844042:-1
position: 844042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844204:-1
position: 844204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:843723-843897:-1:exon

position:843723:-1
position: 843723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:843897:-1
position: 843897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:843427-843524:-1:exon

position:843427:-1
position: 843427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:843524:-1
position: 843524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:843211-843306:-1:exon

position:843211:-1
position: 843211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:843306:-1
position: 843306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:842897-843056:-1:exon

position:842897:-1
position: 842897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:843056:-1
position: 843056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:842563-842798:-1:exon

position:842563:-1
position: 842563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842798:-1
position: 842798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:842321-842475:-1:exon

position:842321:-1
position: 842321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842475:-1
position: 842475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:842060-842131:-1:exon

position:842060:-1
position: 842060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842131:-1
position: 842131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:841598-841794:-1:exon

position:841598:-1
position: 841598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:841794:-1
position: 841794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:840837-840955:-1:exon

position:840837:-1
position: 840837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:840955:-1
position: 840955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:840416-840613:-1:exon

position:840416:-1
position: 840416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:840613:-1
position: 840613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:836463-839932:-1:exon

position:839932:-1
position: 839932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NAV1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: NAV1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuron navigator 1
translation: RIPRGPYAEVKPLSKAPEAGGGGGGKCDDELLGGKGPAVAAGTEEKPYLKVDPELVVTVLGDLEQLLFSQMLDPESQRKRTVQNVLDLRQNLEETMSSLRGSQVSHSSLEMTCYDSDEANPRSVSSLSNRSSPLSWRYGQSSPRLQAGDAPSVGGTCRSEGTPSWYMHGERAHYSHTMPMRSPSKLSHISRLELVEALDTDDVELKSGYMSDSDLMGKTLTEDDDITTGWDESSSISSGLSDASDNLSSEDFNASSSLNSLPSTPTASRRNSAIALRTDSEKRSLAESGLSWYGEGEEKAPKKLDYDSSSLKMEHGSSKWRREPSEGSEEGPKGGELKKPVSLGTPGSLKKGKTPPVAVTSPITHTAQSTLKVAGKPETKVTDKSKLSVKNTGLQRSSSDAGRDRTTDAKKPPSGLARPSSSSSFGYKKPAPATGTATVMQAGGSATLGKIQKSSGIPVKPVSGRKTSLDVSNAPEPGFLAPGARSNIQYRSLPRPAKSSSMSVTGGRSTARPVSSSIDPSLLSTKQGGISVSRLKEPSKVGTGRGTPAPVNQTDREKEKAKAKAVALDSECGTLKSASSPESTPKAQANLPPAAKVAELPPTPLRAAAKTYVKPPSLANLDKVNSNSLDLPSSSELHTPHTAKLQDLHPASGHLAPCFSPSPAPILNINSASFSQGLELMGGFSVPKEGRMYPKLSGLHRSMESLQMPMSLPSAFSGGSTTTPAPAAAPPASTEEEEEEEEAGELGWSGSPRLTHLDSANRDRNTLPKKGLRYQLHSQEEAKERRHSHAVSGLPESDEQQELPSPPALPMALVGKGPLTSIVSPTATAAPRITRSNSIPTHDSTFELYSTSQMGSTLSLADKPKGMIRSGSFRDPVDDVHGSVLSLASSASSTYSSAEEKMQSEQIRKLRRELESSQEKVATLTSQLSANANLVAAFEQSLVSMTSRLRHLAETAEEKDTELLDLRETIDFLKKKNSEAQAVIQGALNGTDVTPKELRIKRQNSSDSISSLNSITSHSSIGSSKDADAKKKKKKSWVYELRSSFNKAFSIKKGPKSASSYSDIEEIATPDSSAPSSPKLQHGSTETASPSIKSSTSSSVGIDTAELFQAHSEGEPEKKEVSELRSELWEKEMKLTDIRLEALNSAHQLEQLRETMHNMQLEVDLLKAENDRLKVAPGPSAVPGSVPSHITSTSASSSPRRSLGLTLGHAFSPSLGDADVSPMDAVSAGTQKDELTLRIVVRMPPQHIIKGDLKQQEFFLGWTKVSGKVDWKMLDEAVCQVFKDYITKMDPASTLGLSTESVYGYSISHIKRVLDTEPPELPLCRRGLSSIVVTLKGLKEKCVDSLVFETLIPKPMMQHYISLLLKHRRLILSGPSGTGKTYLTNRLAEYLVERSGRDVTEGIVSTFNMHQQSCKDLQLYLSNLANQIDRETGTADVPLVILLDDLSEAGSISELVNGALTCKYHKCPYIIGTTNQPVKMTPNHGLHLSFRMLTFSNNVEPANGFLVRYLRRKLLESDTDVNANKEELLRVLDWVPKLWYHLHTFLEKHSTSDFLIGPCFFLSCPIGIEDFRTWFIDLWNNSIIPYLQEGAKDGLKVHGQKAAWEDPVEWVRDTLPWPSAQQDQSKLYHLPPPTIGPHSAVSPPEERTVKDTTPSSLDSDPLMAMLLKLQEAANYIESPDRETMVDPDLQSTL
SIO_010081: NAV1
subclass of: SO_0000673
so part of: NAV1
location: complement(join(839837..839932,840416..840613,840837..840955,841598..841794,842060..842131,842321..842475,842563..842798,842897..843056,843211..843306,843427..843524,843723..843897,844042..844204,844291..844487,845816..845824,846251..846372,846938..847049,847182..847265,847436..847513,847605..847628,847798..847850,848393..848563,849170..849318,849474..849515,849688..850146,850251..850944,851309..851606,851803..851941,862227..862592,866120..866222,893168..>893384))
location: region:839837-893384:-1
so has part: feature:893168-893384:-1:exon
so has part: feature:866120-866222:-1:exon
so has part: feature:862227-862592:-1:exon
so has part: feature:851803-851941:-1:exon
so has part: feature:851309-851606:-1:exon
so has part: feature:850251-850944:-1:exon
so has part: feature:849688-850146:-1:exon
so has part: feature:849474-849515:-1:exon
so has part: feature:849170-849318:-1:exon
so has part: feature:848393-848563:-1:exon
so has part: feature:847798-847850:-1:exon
so has part: feature:847605-847628:-1:exon
so has part: feature:847436-847513:-1:exon
so has part: feature:847182-847265:-1:exon
so has part: feature:846938-847049:-1:exon
so has part: feature:846251-846372:-1:exon
so has part: feature:845816-845824:-1:exon
so has part: feature:844291-844487:-1:exon
so has part: feature:844042-844204:-1:exon
so has part: feature:843723-843897:-1:exon
so has part: feature:843427-843524:-1:exon
so has part: feature:843211-843306:-1:exon
so has part: feature:842897-843056:-1:exon
so has part: feature:842563-842798:-1:exon
so has part: feature:842321-842475:-1:exon
so has part: feature:842060-842131:-1:exon
so has part: feature:841598-841794:-1:exon
so has part: feature:840837-840955:-1:exon
so has part: feature:840416-840613:-1:exon
so has part: feature:839837-839932:-1:exon

XP_033375730.1
type: Protein
SIO_000068: ncbiprotein

position:839837:-1
position: 839837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:893168-893384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:866120-866222:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:862227-862592:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:851803-851941:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:851309-851606:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:850251-850944:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:849688-850146:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:849474-849515:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:849170-849318:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:848393-848563:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:847798-847850:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:847605-847628:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:847436-847513:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:847182-847265:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:846938-847049:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:846251-846372:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:845816-845824:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:844291-844487:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:844042-844204:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:843723-843897:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:843427-843524:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:843211-843306:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:842897-843056:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:842563-842798:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:842321-842475:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:842060-842131:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:841598-841794:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:840837-840955:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:840416-840613:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:839837-839932:-1:exon

LOC107214956
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107214956
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(896015..910656)
location: region:896015-910656:-1
so has part: feature:896015-910656:-1:exon
subclass of: SO_0000010

107214956
type: Gene
SIO_000068: ncbigene

position:896015:-1
position: 896015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:910656:-1
position: 910656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:896015-910656:-1:exon

LOC107214956
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107214956
product: uncharacterized protein ENSP00000471857-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_015650800.2
SIO_010081: LOC107214956
subclass of: SO_0000673
so part of: LOC107214956
location: complement(join(896015..896450,896826..897437,910594..910656))
location: region:896015-910656:-1
so has part: feature:910594-910656:-1:exon
so has part: feature:896826-897437:-1:exon
so has part: feature:896015-896450:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:910594-910656:-1:exon

position:910594:-1
position: 910594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:896826-897437:-1:exon

position:896826:-1
position: 896826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:897437:-1
position: 897437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:896015-896450:-1:exon

position:896450:-1
position: 896450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107214956
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107214956
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein ENSP00000471857-like
translation: MKGTANVNSTGRSHYQSAIPVPRAMAHSKLHTTDLLSTPGSPVLHRAPSPRPGKVPGPGSKTLKPKATGKAAGHEQAEAREGSPSVPAHGGQKAPSRPLVSPGKWPEAAGSGRRGAGRVGEPTELHKAPLAQGRSGGRLGGSPGRGSGTAITGTGDECHGDSQGRGPVFGSGAITFSSGPTHSHPITATVAPFQYRLQEDQEHERATSPGDECSGPEKGCDPDPKPRGLSESRGVGQEWGCPAGGLP
SIO_010081: LOC107214956
subclass of: SO_0000673
so part of: LOC107214956
location: complement(join(896294..896450,896826..897412))
location: region:896294-897412:-1
so has part: feature:896826-897412:-1:exon
so has part: feature:896294-896450:-1:exon

XP_015506286.1
type: Protein
SIO_000068: ncbiprotein

position:896294:-1
position: 896294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:897412:-1
position: 897412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:896826-897412:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:896294-896450:-1:exon

RNPEP
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: RNPEP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 912036..920140
location: region:912036-920140:1
so has part: feature:912036-920140:1:exon
subclass of: SO_0000010

107214916
type: Gene
SIO_000068: ncbigene

position:912036:1
position: 912036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:920140:1
position: 920140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:912036-920140:1:exon

RNPEP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: RNPEP
product: arginyl aminopeptidase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_015650716.2
SIO_010081: RNPEP
subclass of: SO_0000673
so part of: RNPEP
location: join(912036..912460,912810..912950,914492..914640,915184..915300,915417..915652,916499..916612,916821..916933,917241..917349,917924..918148,918734..918876,919873..920140)
location: region:912036-920140:1
so has part: feature:912036-912460:1:exon
so has part: feature:912810-912950:1:exon
so has part: feature:914492-914640:1:exon
so has part: feature:915184-915300:1:exon
so has part: feature:915417-915652:1:exon
so has part: feature:916499-916612:1:exon
so has part: feature:916821-916933:1:exon
so has part: feature:917241-917349:1:exon
so has part: feature:917924-918148:1:exon
so has part: feature:918734-918876:1:exon
so has part: feature:919873-920140:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:912036-912460:1:exon

position:912460:1
position: 912460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:912810-912950:1:exon

position:912810:1
position: 912810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:912950:1
position: 912950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:914492-914640:1:exon

position:914492:1
position: 914492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:914640:1
position: 914640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:915184-915300:1:exon

position:915184:1
position: 915184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:915300:1
position: 915300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:915417-915652:1:exon

position:915417:1
position: 915417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:915652:1
position: 915652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:916499-916612:1:exon

position:916499:1
position: 916499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:916612:1
position: 916612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:916821-916933:1:exon

position:916821:1
position: 916821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:916933:1
position: 916933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:917241-917349:1:exon

position:917241:1
position: 917241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:917349:1
position: 917349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:917924-918148:1:exon

position:917924:1
position: 917924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:918148:1
position: 918148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:918734-918876:1:exon

position:918734:1
position: 918734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:918876:1
position: 918876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:919873-920140:1:exon

position:919873:1
position: 919873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RNPEP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: RNPEP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aminopeptidase B
translation: MAAPVRDPAPVRDAASASSAGPWSLRHLHLELSVSFAAAGPGRLRGRARLELRCERAGAELRLDAHPALAVSRAALLPPPGGPGDAAGQALPVESRPFASYGSALHIALPQAPRAGQLLTLLIDYEAGEGPGVCWLSPEQTAGKQKPYMYTQGQAVLNRSFFPCFDTPSVKFTYSATVKVPEGFTAVMSATSWEKQKDNTFVFKMSQPIPSYLIALVVGDIVSADVGPRSRVWAEPCLIEAAKKEYDGVIEEFLEVGEKLFGPYVWGRYDILFMPPSFPFGGMENPCLTFVTPCLLAGDRSLVDVIIHEISHSWFGNLVTNATWGEFWLNEGFTMYAQRRISTEVYGLPYTCLEAATGRALLRQHMDATGEDHPLNKLRVVIEPGVNPDDTYNETPYEKGYCFVSYLAHLVGNQSKFDAFLQAYVNRFKFQSITADDTLGFFLEYFPDLKEKGVDSIPGFEFDRWLNVPGWPPYLPDLSPGQQLMRPADELAELWAADGLNMEAIEAVDIMGWRTYQLVYFLDQVLQKSPLPEGNVERLSKMYPKISKAQNAELRLRWCQIVLKNNLEAEYSKVKDFLHSQGKQKYTLPLYRAMWGGSEATRALAMEIFSATAPQLHINVQNYVKKILGLGGAEA
SIO_010081: RNPEP
subclass of: SO_0000673
so part of: RNPEP
location: join(912065..912460,912810..912950,914492..914640,915184..915300,915417..915652,916499..916612,916821..916933,917241..917349,917924..918148,918734..918876,919873..920037)
location: region:912065-920037:1
so has part: feature:912065-912460:1:exon
so has part: feature:912810-912950:1:exon
so has part: feature:914492-914640:1:exon
so has part: feature:915184-915300:1:exon
so has part: feature:915417-915652:1:exon
so has part: feature:916499-916612:1:exon
so has part: feature:916821-916933:1:exon
so has part: feature:917241-917349:1:exon
so has part: feature:917924-918148:1:exon
so has part: feature:918734-918876:1:exon
so has part: feature:919873-920037:1:exon

XP_015506202.1
type: Protein
SIO_000068: ncbiprotein

position:912065:1
position: 912065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:920037:1
position: 920037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:912065-912460:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:912810-912950:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:914492-914640:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:915184-915300:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:915417-915652:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:916499-916612:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:916821-916933:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:917241-917349:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:917924-918148:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:918734-918876:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:919873-920037:1:exon